-- dump date 20140620_040757 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 383372000001 SEQ_END SEQ_END NC_009767.1 5723298 5723298 DR NC_009767.1; contig end 5723298..5723298 Roseiflexus castenholzii DSM 13941 YP_001430158.1 CDS dnaA NC_009767.1 370 1812 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 370..1812 Roseiflexus castenholzii DSM 13941 5541967 YP_001430159.1 CDS Rcas_0002 NC_009767.1 1923 3086 D KEGG: rrs:RoseRS_0065 secreted hydrolase-like protein; secreted hydrolase-like protein 1923..3086 Roseiflexus castenholzii DSM 13941 5537459 YP_001430160.1 CDS Rcas_0003 NC_009767.1 3125 3502 D PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_0066 thioesterase superfamily protein; thioesterase superfamily protein 3125..3502 Roseiflexus castenholzii DSM 13941 5537460 YP_001430161.1 CDS Rcas_0004 NC_009767.1 3540 3965 R KEGG: rrs:RoseRS_0070 hypothetical protein; hypothetical protein complement(3540..3965) Roseiflexus castenholzii DSM 13941 5537461 YP_001430162.1 CDS Rcas_0005 NC_009767.1 3966 4196 R KEGG: rrs:RoseRS_0071 hypothetical protein; hypothetical protein complement(3966..4196) Roseiflexus castenholzii DSM 13941 5537462 YP_001430163.1 CDS Rcas_0006 NC_009767.1 4259 4687 R PFAM: histidine triad (HIT) protein; KEGG: rrs:RoseRS_0075 histidine triad (HIT) protein; histidine triad (HIT) protein complement(4259..4687) Roseiflexus castenholzii DSM 13941 5537463 YP_001430164.1 CDS Rcas_0007 NC_009767.1 4718 6460 R PFAM: helix-hairpin-helix motif; PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: rrs:RoseRS_0076 PHP C-terminal domain protein; phosphotransferase domain-containing protein complement(4718..6460) Roseiflexus castenholzii DSM 13941 5537464 YP_001430165.1 CDS greA NC_009767.1 6922 7395 D necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 6922..7395 Roseiflexus castenholzii DSM 13941 5537465 YP_001430166.1 CDS lysS NC_009767.1 7529 8998 D class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 7529..8998 Roseiflexus castenholzii DSM 13941 5537466 YP_001430167.1 CDS Rcas_0010 NC_009767.1 9035 9283 D KEGG: rrs:RoseRS_0079 hypothetical protein; hypothetical protein 9035..9283 Roseiflexus castenholzii DSM 13941 5537467 YP_001430168.1 CDS Rcas_0011 NC_009767.1 9480 9875 D TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: rrs:RoseRS_0080 death-on-curing family protein; death-on-curing family protein 9480..9875 Roseiflexus castenholzii DSM 13941 5537468 YP_001430169.1 CDS Rcas_0012 NC_009767.1 9892 10830 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0081 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 9892..10830 Roseiflexus castenholzii DSM 13941 5537469 YP_001430170.1 CDS Rcas_0013 NC_009767.1 11062 12375 D PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_0082 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 11062..12375 Roseiflexus castenholzii DSM 13941 5537470 YP_001430171.1 CDS Rcas_0014 NC_009767.1 13696 14769 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4518 glycosyl transferase, family 2; glycosyl transferase family protein complement(13696..14769) Roseiflexus castenholzii DSM 13941 5537471 YP_001430172.1 CDS Rcas_0015 NC_009767.1 14871 16382 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_4519 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 14871..16382 Roseiflexus castenholzii DSM 13941 5537472 YP_001430173.1 CDS Rcas_0016 NC_009767.1 16565 17104 D PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_4520 thioesterase superfamily protein; thioesterase superfamily protein 16565..17104 Roseiflexus castenholzii DSM 13941 5537473 YP_001430174.1 CDS Rcas_0017 NC_009767.1 17324 18325 R PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_4524 glycosyl transferase, family 4; glycosyl transferase family protein complement(17324..18325) Roseiflexus castenholzii DSM 13941 5537474 YP_001430175.1 CDS Rcas_0018 NC_009767.1 18464 19081 D PFAM: BioY protein; KEGG: rrs:RoseRS_4523 BioY protein; BioY protein 18464..19081 Roseiflexus castenholzii DSM 13941 5537475 YP_001430176.1 CDS Rcas_0019 NC_009767.1 21418 22704 R TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_4522 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase complement(21418..22704) Roseiflexus castenholzii DSM 13941 5537476 YP_001430177.1 CDS Rcas_0020 NC_009767.1 22709 23590 R PFAM: amidinotransferase; KEGG: rrs:RoseRS_4521 amidinotransferase; amidinotransferase complement(22709..23590) Roseiflexus castenholzii DSM 13941 5537477 YP_001430178.1 CDS Rcas_0021 NC_009767.1 25868 27007 D KEGG: rrs:RoseRS_4525 hypothetical protein; hypothetical protein 25868..27007 Roseiflexus castenholzii DSM 13941 5537478 YP_001430179.1 CDS Rcas_0022 NC_009767.1 27424 28374 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_4526 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 27424..28374 Roseiflexus castenholzii DSM 13941 5537479 YP_001430180.1 CDS Rcas_0023 NC_009767.1 28504 30525 R PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: rrs:RoseRS_4527 sodium/hydrogen exchanger; sodium/hydrogen exchanger complement(28504..30525) Roseiflexus castenholzii DSM 13941 5537480 YP_001430181.1 CDS Rcas_0024 NC_009767.1 30940 31614 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4530 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 30940..31614 Roseiflexus castenholzii DSM 13941 5537481 YP_001430182.1 CDS Rcas_0025 NC_009767.1 31620 32162 D KEGG: rrs:RoseRS_4531 transmembrane anti-sigma factor; transmembrane anti-sigma factor 31620..32162 Roseiflexus castenholzii DSM 13941 5537482 YP_001430183.1 CDS Rcas_0026 NC_009767.1 32298 32636 D hypothetical protein 32298..32636 Roseiflexus castenholzii DSM 13941 5537483 YP_001430184.1 CDS Rcas_0027 NC_009767.1 33607 34134 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rrs:RoseRS_0828 single-strand binding protein; single-strand binding protein complement(33607..34134) Roseiflexus castenholzii DSM 13941 5537484 YP_001430185.1 CDS Rcas_0028 NC_009767.1 34407 36539 D PFAM: glycosyl transferase group 1; Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0780 glycosyl transferase, group 1; group 1 glycosyl transferase 34407..36539 Roseiflexus castenholzii DSM 13941 5537485 YP_001430186.1 CDS Rcas_0029 NC_009767.1 36569 38632 D KEGG: rrs:RoseRS_0779 glycosyl transferase, family 39; glycosyl transferase family protein 36569..38632 Roseiflexus castenholzii DSM 13941 5537486 YP_001430187.1 CDS Rcas_0030 NC_009767.1 38648 39301 D PFAM: deoxynucleoside kinase; KEGG: rrs:RoseRS_0778 deoxynucleoside kinase; deoxynucleoside kinase 38648..39301 Roseiflexus castenholzii DSM 13941 5537487 YP_001430188.1 CDS Rcas_0031 NC_009767.1 39423 41324 D PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rrs:RoseRS_0776 hypothetical protein; guanylate cyclase 39423..41324 Roseiflexus castenholzii DSM 13941 5537488 YP_001430189.1 CDS Rcas_0032 NC_009767.1 41601 45938 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0774 TPR repeat-containing protein; hypothetical protein 41601..45938 Roseiflexus castenholzii DSM 13941 5537490 YP_001430190.1 CDS Rcas_0033 NC_009767.1 45982 46341 D PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0773 roadblock/LC7 family protein; roadblock/LC7 family protein 45982..46341 Roseiflexus castenholzii DSM 13941 5537491 YP_001430191.1 CDS ndk NC_009767.1 46487 46936 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 46487..46936 Roseiflexus castenholzii DSM 13941 5537492 YP_001430192.1 CDS Rcas_0035 NC_009767.1 46943 48208 R KEGG: rrs:RoseRS_0771 hypothetical protein; hypothetical protein complement(46943..48208) Roseiflexus castenholzii DSM 13941 5537493 YP_001430193.1 CDS Rcas_0036 NC_009767.1 48275 50185 R PFAM: VanW family protein; KEGG: rrs:RoseRS_0768 VanW family protein; von Willebrand factor A complement(48275..50185) Roseiflexus castenholzii DSM 13941 5537494 YP_001430194.1 CDS radC NC_009767.1 50282 50983 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(50282..50983) Roseiflexus castenholzii DSM 13941 5537495 YP_001430195.1 CDS Rcas_0038 NC_009767.1 51343 53136 R PFAM: peptidase M23B; KEGG: rrs:RoseRS_4626 peptidase M23B; peptidase M23B complement(51343..53136) Roseiflexus castenholzii DSM 13941 5537496 YP_001430196.1 CDS Rcas_0040 NC_009767.1 53764 54087 R PFAM: CutA1 divalent ion tolerance protein; KEGG: rrs:RoseRS_4624 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein complement(53764..54087) Roseiflexus castenholzii DSM 13941 5537498 YP_001430197.1 CDS Rcas_0041 NC_009767.1 54325 55779 D PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_4193 aldehyde dehydrogenase; aldehyde dehydrogenase 54325..55779 Roseiflexus castenholzii DSM 13941 5537499 YP_001430198.1 CDS Rcas_0042 NC_009767.1 55781 56665 R KEGG: rrs:RoseRS_4192 hypothetical protein; hypothetical protein complement(55781..56665) Roseiflexus castenholzii DSM 13941 5537500 YP_001430199.1 CDS Rcas_0043 NC_009767.1 56990 57949 D KEGG: rrs:RoseRS_0859 hypothetical protein; hypothetical protein 56990..57949 Roseiflexus castenholzii DSM 13941 5537501 YP_001430200.1 CDS Rcas_0044 NC_009767.1 57963 58976 D PFAM: integrase family protein; KEGG: rrs:RoseRS_0860 phage integrase family protein; integrase family protein 57963..58976 Roseiflexus castenholzii DSM 13941 5537502 YP_001430201.1 CDS Rcas_0045 NC_009767.1 59089 60288 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_0861 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 59089..60288 Roseiflexus castenholzii DSM 13941 5537503 YP_001430202.1 CDS Rcas_0046 NC_009767.1 60431 62023 R TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: rrs:RoseRS_0862 glycyl-tRNA synthetase; glycyl-tRNA synthetase complement(60431..62023) Roseiflexus castenholzii DSM 13941 5537504 YP_001430203.1 CDS Rcas_0047 NC_009767.1 62261 63205 R PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rrs:RoseRS_0863 phage integrase family protein; integrase family protein complement(62261..63205) Roseiflexus castenholzii DSM 13941 5537505 YP_001430204.1 CDS Rcas_0048 NC_009767.1 63354 64361 R TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_0864 TIM-barrel protein, nifR3 family; nifR3 family TIM-barrel protein complement(63354..64361) Roseiflexus castenholzii DSM 13941 5537506 YP_001430205.1 CDS Rcas_0049 NC_009767.1 64435 64662 R hypothetical protein complement(64435..64662) Roseiflexus castenholzii DSM 13941 5537507 YP_001430206.1 CDS Rcas_0050 NC_009767.1 64741 66081 D KEGG: rrs:RoseRS_3312 hypothetical protein; hypothetical protein 64741..66081 Roseiflexus castenholzii DSM 13941 5537508 YP_001430207.1 CDS Rcas_0051 NC_009767.1 66082 67074 R KEGG: rrs:RoseRS_3313 hypothetical protein; hypothetical protein complement(66082..67074) Roseiflexus castenholzii DSM 13941 5537509 YP_001430208.1 CDS Rcas_0052 NC_009767.1 67172 67666 D KEGG: rrs:RoseRS_3314 hypothetical protein; hypothetical protein 67172..67666 Roseiflexus castenholzii DSM 13941 5537510 YP_001430209.1 CDS Rcas_0053 NC_009767.1 67679 68164 R KEGG: rrs:RoseRS_3315 hypothetical protein; hypothetical protein complement(67679..68164) Roseiflexus castenholzii DSM 13941 5537511 YP_001430210.1 CDS Rcas_0054 NC_009767.1 68332 69099 D PFAM: inositol monophosphatase; KEGG: rrs:RoseRS_3316 inositol monophosphatase; inositol monophosphatase 68332..69099 Roseiflexus castenholzii DSM 13941 5537512 YP_001430211.1 CDS Rcas_0055 NC_009767.1 69112 70179 D PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_3317 radical SAM domain protein; radical SAM domain-containing protein 69112..70179 Roseiflexus castenholzii DSM 13941 5537513 YP_001430212.1 CDS Rcas_0056 NC_009767.1 70217 70438 D KEGG: rrs:RoseRS_3318 hypothetical protein; hypothetical protein 70217..70438 Roseiflexus castenholzii DSM 13941 5537514 YP_001430213.1 CDS Rcas_0057 NC_009767.1 70479 71711 D TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_3319 threonine dehydratase; threonine dehydratase 70479..71711 Roseiflexus castenholzii DSM 13941 5537515 YP_001430214.1 CDS Rcas_0058 NC_009767.1 71729 71950 D KEGG: rrs:RoseRS_3320 hypothetical protein; hypothetical protein 71729..71950 Roseiflexus castenholzii DSM 13941 5537516 YP_001430215.1 CDS Rcas_0059 NC_009767.1 72044 72265 D KEGG: rrs:RoseRS_3321 hypothetical protein; hypothetical protein 72044..72265 Roseiflexus castenholzii DSM 13941 5537517 YP_001430216.1 CDS Rcas_0060 NC_009767.1 72281 75718 R PFAM: HEAT domain containing protein; transcriptional regulator domain protein; PBS lyase HEAT domain protein repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: AAA ATPase; KEGG: rrs:RoseRS_3322 transcriptional activator domain; transcriptional activator domain-containing protein complement(72281..75718) Roseiflexus castenholzii DSM 13941 5537518 YP_001430217.1 CDS Rcas_0061 NC_009767.1 76292 76846 D PFAM: Colicin V production protein; KEGG: rrs:RoseRS_4015 hypothetical protein; colicin V production protein 76292..76846 Roseiflexus castenholzii DSM 13941 5537520 YP_001430218.1 CDS Rcas_0062 NC_009767.1 76893 79373 D KEGG: rrs:RoseRS_4014 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein; MutS2 family protein 76893..79373 Roseiflexus castenholzii DSM 13941 5537521 YP_001430219.1 CDS Rcas_0063 NC_009767.1 79381 79989 D PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_4013 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM 79381..79989 Roseiflexus castenholzii DSM 13941 5537522 YP_001430220.1 CDS Rcas_0064 NC_009767.1 79986 80501 D KEGG: rrs:RoseRS_4012 hypothetical protein; hypothetical protein 79986..80501 Roseiflexus castenholzii DSM 13941 5537523 YP_001430221.1 CDS Rcas_0065 NC_009767.1 80524 81621 D PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; KEGG: rrs:RoseRS_4011 polysaccharide deacetylase; polysaccharide deacetylase 80524..81621 Roseiflexus castenholzii DSM 13941 5537524 YP_001430222.1 CDS Rcas_0066 NC_009767.1 81867 83078 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rrs:RoseRS_4010 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter subunit DctP complement(81867..83078) Roseiflexus castenholzii DSM 13941 5537525 YP_001430223.1 CDS Rcas_0067 NC_009767.1 83306 83920 R KEGG: rrs:RoseRS_4009 hypothetical protein; hypothetical protein complement(83306..83920) Roseiflexus castenholzii DSM 13941 5537526 YP_001430224.1 CDS Rcas_0068 NC_009767.1 83942 85336 R KEGG: rrs:RoseRS_4009 hypothetical protein; hypothetical protein complement(83942..85336) Roseiflexus castenholzii DSM 13941 5537527 YP_001430225.1 CDS Rcas_0069 NC_009767.1 85876 88785 R KEGG: rrs:RoseRS_4007 hypothetical protein; hypothetical protein complement(85876..88785) Roseiflexus castenholzii DSM 13941 5537528 YP_001430226.1 CDS Rcas_0070 NC_009767.1 88782 89201 R KEGG: rrs:RoseRS_4006 hypothetical protein; hypothetical protein complement(88782..89201) Roseiflexus castenholzii DSM 13941 5537529 YP_001430227.1 CDS Rcas_0071 NC_009767.1 89188 89430 R KEGG: rrs:RoseRS_0348 hypothetical protein; hypothetical protein complement(89188..89430) Roseiflexus castenholzii DSM 13941 5537530 YP_001430228.1 CDS Rcas_0073 NC_009767.1 90026 91207 R KEGG: ilo:IL1617 hypothetical protein; hypothetical protein complement(90026..91207) Roseiflexus castenholzii DSM 13941 5537532 YP_001430229.1 CDS eno NC_009767.1 91462 92751 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(91462..92751) Roseiflexus castenholzii DSM 13941 5537533 YP_001430230.1 CDS Rcas_0075 NC_009767.1 92956 94029 R PFAM: DRTGG domain protein; KEGG: rrs:RoseRS_4533 DRTGG domain protein; DRTGG domain-containing protein complement(92956..94029) Roseiflexus castenholzii DSM 13941 5537534 YP_001430231.1 CDS Rcas_0076 NC_009767.1 94083 96179 R TIGRFAM: Acetyl coenzyme A synthetase (ADP forming) alpha domain; PFAM: CoA-binding domain protein; KEGG: rrs:RoseRS_4534 CoA-binding domain protein; acetyl coenzyme A synthetase subunit alpha complement(94083..96179) Roseiflexus castenholzii DSM 13941 5537535 YP_001430232.1 CDS leuS NC_009767.1 96878 99592 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(96878..99592) Roseiflexus castenholzii DSM 13941 5537536 YP_001430233.1 CDS Rcas_0078 NC_009767.1 99635 100456 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4536 methyltransferase type 11; type 11 methyltransferase complement(99635..100456) Roseiflexus castenholzii DSM 13941 5537537 YP_001430234.1 CDS Rcas_0079 NC_009767.1 100541 101056 R hypothetical protein complement(100541..101056) Roseiflexus castenholzii DSM 13941 5537538 YP_001430235.1 CDS Rcas_0080 NC_009767.1 101058 102074 R KEGG: jan:Jann_4252 hypothetical protein; hypothetical protein complement(101058..102074) Roseiflexus castenholzii DSM 13941 5537539 YP_001430236.1 CDS Rcas_0081 NC_009767.1 102424 102759 R KEGG: syn:sll1400 hypothetical protein; hypothetical protein complement(102424..102759) Roseiflexus castenholzii DSM 13941 5537540 YP_001430237.1 CDS Rcas_0082 NC_009767.1 102756 102986 R PFAM: protein of unknown function DUF433; KEGG: ava:Ava_1741 protein of unknown function DUF433; hypothetical protein complement(102756..102986) Roseiflexus castenholzii DSM 13941 5537541 YP_001430238.1 CDS Rcas_0083 NC_009767.1 103142 104125 R KEGG: rrs:RoseRS_4537 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(103142..104125) Roseiflexus castenholzii DSM 13941 5537542 YP_001430239.1 CDS Rcas_0084 NC_009767.1 104416 105402 D PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_4538 aldo/keto reductase; aldo/keto reductase 104416..105402 Roseiflexus castenholzii DSM 13941 5537543 YP_001430240.1 CDS Rcas_0085 NC_009767.1 105460 106272 D KEGG: rrs:RoseRS_4539 hypothetical protein; hypothetical protein 105460..106272 Roseiflexus castenholzii DSM 13941 5537544 YP_001430241.1 CDS Rcas_0086 NC_009767.1 106490 108595 R TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: rrs:RoseRS_4540 translation elongation factor G; translation elongation factor G complement(106490..108595) Roseiflexus castenholzii DSM 13941 5537545 YP_001430242.1 CDS Rcas_0087 NC_009767.1 109067 110431 R TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_4541 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(109067..110431) Roseiflexus castenholzii DSM 13941 5537546 YP_001430243.1 CDS Rcas_0088 NC_009767.1 110552 110863 D PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0900 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 110552..110863 Roseiflexus castenholzii DSM 13941 5537547 YP_001430244.1 CDS Rcas_0089 NC_009767.1 110844 111191 D PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_0899 protein of unknown function DUF86; hypothetical protein 110844..111191 Roseiflexus castenholzii DSM 13941 5537548 YP_001430245.1 CDS Rcas_0090 NC_009767.1 111188 113281 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_4542 molybdopterin oxidoreductase; molybdopterin oxidoreductase 111188..113281 Roseiflexus castenholzii DSM 13941 5537549 YP_001430246.1 CDS Rcas_0091 NC_009767.1 113278 113799 D PFAM: shikimate kinase; KEGG: rrs:RoseRS_4543 shikimate kinase; shikimate kinase 113278..113799 Roseiflexus castenholzii DSM 13941 5537550 YP_001430247.1 CDS Rcas_0092 NC_009767.1 114050 115009 D KEGG: rrs:RoseRS_4544 hypothetical protein; hypothetical protein 114050..115009 Roseiflexus castenholzii DSM 13941 5537551 YP_001430248.1 CDS Rcas_0093 NC_009767.1 115318 116433 D PFAM: 3-dehydroquinate synthase; KEGG: rrs:RoseRS_4545 3-dehydroquinate synthase; 3-dehydroquinate synthase 115318..116433 Roseiflexus castenholzii DSM 13941 5537552 YP_001430249.1 CDS Rcas_0094 NC_009767.1 116430 116843 D TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: maq:Maqu_2654 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein 116430..116843 Roseiflexus castenholzii DSM 13941 5537553 YP_001430250.1 CDS Rcas_0095 NC_009767.1 116840 117178 D PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_1133 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 116840..117178 Roseiflexus castenholzii DSM 13941 5537554 YP_001430251.1 CDS Rcas_0097 NC_009767.1 117561 117968 R KEGG: rrs:RoseRS_4546 Cna B domain protein; Cna B domain-containing protein complement(117561..117968) Roseiflexus castenholzii DSM 13941 5537556 YP_001430252.1 CDS Rcas_0098 NC_009767.1 118188 118604 R KEGG: rrs:RoseRS_4546 Cna B domain protein; Cna B domain-containing protein complement(118188..118604) Roseiflexus castenholzii DSM 13941 5537557 YP_001430253.1 CDS Rcas_0099 NC_009767.1 118773 120122 D PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4547 protein phosphatase 2C domain protein; Ser/Thr phosphatase 118773..120122 Roseiflexus castenholzii DSM 13941 5537558 YP_001430254.1 CDS Rcas_0100 NC_009767.1 120193 122010 D TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: rrs:RoseRS_4548 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 120193..122010 Roseiflexus castenholzii DSM 13941 5537559 YP_001430255.1 CDS Rcas_0101 NC_009767.1 122003 122716 R PFAM: iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_4549 iron dependent repressor; DtxR family iron dependent repressor complement(122003..122716) Roseiflexus castenholzii DSM 13941 5537560 YP_001430256.1 CDS Rcas_0102 NC_009767.1 122743 123090 R PFAM: protein of unknown function DUF952; KEGG: rrs:RoseRS_4550 protein of unknown function DUF952; hypothetical protein complement(122743..123090) Roseiflexus castenholzii DSM 13941 5537561 YP_001430257.1 CDS Rcas_0103 NC_009767.1 123087 124613 R PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_4551 carbohydrate kinase, FGGY; carbohydrate kinase FGGY complement(123087..124613) Roseiflexus castenholzii DSM 13941 5537562 YP_001430258.1 CDS Rcas_0104 NC_009767.1 124743 125483 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4552 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(124743..125483) Roseiflexus castenholzii DSM 13941 5537563 YP_001430259.1 CDS Rcas_0105 NC_009767.1 125516 126634 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4553 alpha/beta hydrolase fold; alpha/beta hydrolase complement(125516..126634) Roseiflexus castenholzii DSM 13941 5537564 YP_001430260.1 CDS Rcas_0106 NC_009767.1 126679 127281 R KEGG: rrs:RoseRS_4554 hypothetical protein; hypothetical protein complement(126679..127281) Roseiflexus castenholzii DSM 13941 5537565 YP_001430261.1 CDS Rcas_0107 NC_009767.1 128145 128390 D hypothetical protein 128145..128390 Roseiflexus castenholzii DSM 13941 5537566 YP_001430262.1 CDS Rcas_0108 NC_009767.1 128678 129049 D KEGG: rrs:RoseRS_4555 hypothetical protein; hypothetical protein 128678..129049 Roseiflexus castenholzii DSM 13941 5537567 YP_001430263.1 CDS Rcas_0109 NC_009767.1 129247 131262 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4556 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 129247..131262 Roseiflexus castenholzii DSM 13941 5537568 YP_001430264.1 CDS Rcas_0110 NC_009767.1 131280 132617 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4562 ABC transporter related; ABC transporter-like protein 131280..132617 Roseiflexus castenholzii DSM 13941 5537569 YP_001430265.1 CDS Rcas_0111 NC_009767.1 132882 133745 D PFAM: MgtC/SapB transporter; KEGG: rrs:RoseRS_4564 MgtC/SapB transporter; MgtC/SapB transporter 132882..133745 Roseiflexus castenholzii DSM 13941 5537570 YP_001430266.1 CDS Rcas_0112 NC_009767.1 134044 134799 R PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4565 stage II sporulation E family protein; Ser/Thr phosphatase complement(134044..134799) Roseiflexus castenholzii DSM 13941 5537572 YP_001430267.1 CDS Rcas_0113 NC_009767.1 135103 136470 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4566 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(135103..136470) Roseiflexus castenholzii DSM 13941 5537573 YP_001430268.1 CDS Rcas_0114 NC_009767.1 136891 137790 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4567 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(136891..137790) Roseiflexus castenholzii DSM 13941 5537574 YP_001430269.1 CDS Rcas_0115 NC_009767.1 138018 138929 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4568 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(138018..138929) Roseiflexus castenholzii DSM 13941 5537575 YP_001430270.1 CDS Rcas_0116 NC_009767.1 139332 139541 D KEGG: rrs:RoseRS_4569 hypothetical protein; hypothetical protein 139332..139541 Roseiflexus castenholzii DSM 13941 5537576 YP_001430271.1 CDS Rcas_0117 NC_009767.1 139673 141034 D PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_4570 aminotransferase class-III; class III aminotransferase 139673..141034 Roseiflexus castenholzii DSM 13941 5537577 YP_001430272.1 CDS Rcas_0118 NC_009767.1 141027 141791 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4571 protein of unknown function DUF820; hypothetical protein 141027..141791 Roseiflexus castenholzii DSM 13941 5537578 YP_001430273.1 CDS Rcas_0119 NC_009767.1 141788 142405 D KEGG: rrs:RoseRS_4572 hypothetical protein; hypothetical protein 141788..142405 Roseiflexus castenholzii DSM 13941 5537579 YP_001430274.1 CDS Rcas_0120 NC_009767.1 142579 142926 D KEGG: rrs:RoseRS_4573 hypothetical protein; hypothetical protein 142579..142926 Roseiflexus castenholzii DSM 13941 5537580 YP_001430275.1 CDS Rcas_0121 NC_009767.1 143241 144605 D KEGG: rrs:RoseRS_4574 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 143241..144605 Roseiflexus castenholzii DSM 13941 5537581 YP_001430276.1 CDS Rcas_0122 NC_009767.1 144595 145233 D PFAM: Formiminotransferase-cyclodeaminase; KEGG: rrs:RoseRS_4575 formiminotransferase-cyclodeaminase; formiminotransferase-cyclodeaminase 144595..145233 Roseiflexus castenholzii DSM 13941 5537582 YP_001430277.1 CDS Rcas_0123 NC_009767.1 145306 146256 D PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_4576 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 145306..146256 Roseiflexus castenholzii DSM 13941 5537583 YP_001430278.1 CDS Rcas_0124 NC_009767.1 146793 149102 R PFAM: ATP-cone domain protein; KEGG: rrs:RoseRS_4577 ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase complement(146793..149102) Roseiflexus castenholzii DSM 13941 5537584 YP_001430279.1 CDS Rcas_0125 NC_009767.1 149995 152340 D PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_4578 protein of unknown function DUF323; hypothetical protein 149995..152340 Roseiflexus castenholzii DSM 13941 5537585 YP_001430280.1 CDS Rcas_0126 NC_009767.1 153079 154194 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4579 glycosyl transferase, group 1; group 1 glycosyl transferase 153079..154194 Roseiflexus castenholzii DSM 13941 5537586 YP_001430281.1 CDS Rcas_0127 NC_009767.1 154198 154959 R PFAM: protein of unknown function DUF1037; KEGG: rrs:RoseRS_4342 protein of unknown function DUF1037; hypothetical protein complement(154198..154959) Roseiflexus castenholzii DSM 13941 5537587 YP_001430282.1 CDS Rcas_0128 NC_009767.1 154992 156293 R KEGG: rrs:RoseRS_0604 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein complement(154992..156293) Roseiflexus castenholzii DSM 13941 5537588 YP_001430283.1 CDS Rcas_0129 NC_009767.1 156492 158132 R PFAM: amino acid permease-associated region; KEGG: rrs:RoseRS_4340 hypothetical protein; amino acid permease complement(156492..158132) Roseiflexus castenholzii DSM 13941 5537589 YP_001430284.1 CDS Rcas_0130 NC_009767.1 158151 158801 R PFAM: cyclase family protein; KEGG: rrs:RoseRS_4339 cyclase family protein; cyclase family protein complement(158151..158801) Roseiflexus castenholzii DSM 13941 5537590 YP_001430285.1 CDS Rcas_0131 NC_009767.1 158825 159808 R PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_4338 metallophosphoesterase; metallophosphoesterase complement(158825..159808) Roseiflexus castenholzii DSM 13941 5537591 YP_001430286.1 CDS Rcas_0132 NC_009767.1 159811 160545 R KEGG: rrs:RoseRS_4337 hypothetical protein; hypothetical protein complement(159811..160545) Roseiflexus castenholzii DSM 13941 5537592 YP_001430287.1 CDS Rcas_0134 NC_009767.1 162033 162653 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4336 protein of unknown function DUF820; hypothetical protein complement(162033..162653) Roseiflexus castenholzii DSM 13941 5537594 YP_001430288.1 CDS Rcas_0135 NC_009767.1 162982 165153 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0463 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase complement(162982..165153) Roseiflexus castenholzii DSM 13941 5537595 YP_001430289.1 CDS Rcas_0136 NC_009767.1 165154 165939 R PFAM: transcriptional regulator TrmB; KEGG: rrs:RoseRS_0464 transcriptional regulator, TrmB; transcriptional regulator TrmB complement(165154..165939) Roseiflexus castenholzii DSM 13941 5537596 YP_001430290.1 CDS Rcas_0137 NC_009767.1 166012 166902 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0466 glycosyl transferase, family 2; glycosyl transferase family protein 166012..166902 Roseiflexus castenholzii DSM 13941 5537597 YP_001430291.1 CDS Rcas_0138 NC_009767.1 167013 167894 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0466 glycosyl transferase, family 2; glycosyl transferase family protein 167013..167894 Roseiflexus castenholzii DSM 13941 5537598 YP_001430292.1 CDS Rcas_0139 NC_009767.1 167869 168828 D PFAM: glycosyl transferase family 2; KEGG: rci:LRC548 glycosyltransferase (family 2); glycosyl transferase family protein 167869..168828 Roseiflexus castenholzii DSM 13941 5537599 YP_001430293.1 CDS Rcas_0140 NC_009767.1 168816 169763 D KEGG: fra:Francci3_1327 conserved hypothetical protein; hypothetical protein 168816..169763 Roseiflexus castenholzii DSM 13941 5537600 YP_001430294.1 CDS Rcas_0141 NC_009767.1 169771 170454 D PFAM: Methyltransferase type 11; KEGG: mgm:Mmc1_0584 methyltransferase type 11; type 11 methyltransferase 169771..170454 Roseiflexus castenholzii DSM 13941 5537601 YP_001430295.1 CDS Rcas_0142 NC_009767.1 170468 171397 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gur:Gura_3058 methyltransferase type 12; type 12 methyltransferase 170468..171397 Roseiflexus castenholzii DSM 13941 5537602 YP_001430296.1 CDS Rcas_0143 NC_009767.1 171624 173141 D KEGG: rrs:RoseRS_0471 hypothetical protein; hypothetical protein 171624..173141 Roseiflexus castenholzii DSM 13941 5537603 YP_001430297.1 CDS Rcas_0144 NC_009767.1 173212 174078 R KEGG: sil:SPO2208 hypothetical protein; hypothetical protein complement(173212..174078) Roseiflexus castenholzii DSM 13941 5537604 YP_001430298.1 CDS Rcas_0145 NC_009767.1 174097 175461 R PFAM: regulatory protein LuxR; Kelch repeat-containing protein; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; Kelch repeat protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0474 response regulator receiver protein; LuxR family transcriptional regulator complement(174097..175461) Roseiflexus castenholzii DSM 13941 5537605 YP_001430299.1 CDS Rcas_0146 NC_009767.1 176009 176964 D KEGG: noc:Noc_0070 transposase; transposase join(176009..176347,176347..176964) Roseiflexus castenholzii DSM 13941 5537606 YP_001430300.1 CDS Rcas_0147 NC_009767.1 178073 179944 R KEGG: rrs:RoseRS_0475 hypothetical protein; hypothetical protein complement(178073..179944) Roseiflexus castenholzii DSM 13941 5537607 YP_001430301.1 CDS Rcas_0148 NC_009767.1 180272 181018 R KEGG: rrs:RoseRS_0476 hypothetical protein; hypothetical protein complement(180272..181018) Roseiflexus castenholzii DSM 13941 5537608 YP_001430302.1 CDS Rcas_0149 NC_009767.1 181191 181418 D KEGG: rrs:RoseRS_0477 hypothetical protein; hypothetical protein 181191..181418 Roseiflexus castenholzii DSM 13941 5537609 YP_001430303.1 CDS Rcas_0150 NC_009767.1 181497 182681 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_0478 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 181497..182681 Roseiflexus castenholzii DSM 13941 5537610 YP_001430304.1 CDS Rcas_0151 NC_009767.1 182684 183430 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0479 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 182684..183430 Roseiflexus castenholzii DSM 13941 5537611 YP_001430305.1 CDS Rcas_0152 NC_009767.1 183619 184023 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_0480 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 183619..184023 Roseiflexus castenholzii DSM 13941 5537612 YP_001430306.1 CDS Rcas_0153 NC_009767.1 184080 185060 D PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0481 conserved hypothetical protein 374; hypothetical protein 184080..185060 Roseiflexus castenholzii DSM 13941 5537613 YP_001430307.1 CDS Rcas_0154 NC_009767.1 185176 186381 D KEGG: rrs:RoseRS_0482 hypothetical protein; hypothetical protein 185176..186381 Roseiflexus castenholzii DSM 13941 5537614 YP_001430308.1 CDS Rcas_0155 NC_009767.1 186391 189435 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: rrs:RoseRS_0484 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(186391..189435) Roseiflexus castenholzii DSM 13941 5537615 YP_001430309.1 CDS Rcas_0156 NC_009767.1 189580 190644 D KEGG: rrs:RoseRS_0485 translation initiation factor, aIF-2BI family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; eIF-2B alpha/beta/delta-like protein 189580..190644 Roseiflexus castenholzii DSM 13941 5537616 YP_001430310.1 CDS Rcas_0157 NC_009767.1 190648 191688 D KEGG: rrs:RoseRS_0486 hypothetical protein; hypothetical protein 190648..191688 Roseiflexus castenholzii DSM 13941 5537617 YP_001430311.1 CDS Rcas_0158 NC_009767.1 191700 192683 D PFAM: PfkB domain protein; KEGG: rrs:RoseRS_0487 PfkB domain protein; ribokinase-like domain-containing protein 191700..192683 Roseiflexus castenholzii DSM 13941 5537618 YP_001430312.1 CDS Rcas_0159 NC_009767.1 192826 194088 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 192826..194088 Roseiflexus castenholzii DSM 13941 5537619 YP_001430313.1 CDS Rcas_0160 NC_009767.1 194100 195317 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 194100..195317 Roseiflexus castenholzii DSM 13941 5537620 YP_001430314.1 CDS Rcas_0161 NC_009767.1 195890 196753 D KEGG: rrs:RoseRS_0490 hypothetical protein; hypothetical protein 195890..196753 Roseiflexus castenholzii DSM 13941 5537621 YP_001430315.1 CDS Rcas_0163 NC_009767.1 198519 199694 D PFAM: glucose sorbosone dehydrogenase; KEGG: rrs:RoseRS_4595 glucose sorbosone dehydrogenase; glucose sorbosone dehydrogenase 198519..199694 Roseiflexus castenholzii DSM 13941 5537624 YP_001430316.1 CDS Rcas_0164 NC_009767.1 199681 200991 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4594 ABC transporter related; ABC transporter-like protein complement(199681..200991) Roseiflexus castenholzii DSM 13941 5537625 YP_001430317.1 CDS Rcas_0165 NC_009767.1 201010 202734 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4593 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(201010..202734) Roseiflexus castenholzii DSM 13941 5537626 YP_001430318.1 CDS Rcas_0166 NC_009767.1 203138 204808 D PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: rrs:RoseRS_4592 pseudouridine synthase; pseudouridine synthase 203138..204808 Roseiflexus castenholzii DSM 13941 5537627 YP_001430319.1 CDS Rcas_0167 NC_009767.1 204959 205588 R PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_4591 allergen V5/TPX-1 family protein; SCP-like extracellular complement(204959..205588) Roseiflexus castenholzii DSM 13941 5537628 YP_001430320.1 CDS Rcas_0168 NC_009767.1 205885 206967 R TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rrs:RoseRS_4590 DNA protecting protein DprA; DNA protecting protein DprA complement(205885..206967) Roseiflexus castenholzii DSM 13941 5537629 YP_001430321.1 CDS Rcas_0169 NC_009767.1 207046 207900 R KEGG: rrs:RoseRS_4588 spermidine synthase-like protein; spermidine synthase-like protein complement(207046..207900) Roseiflexus castenholzii DSM 13941 5537630 YP_001430322.1 CDS Rcas_0170 NC_009767.1 207908 209674 R PFAM: ABC-1 domain protein; KEGG: rrs:RoseRS_4587 ABC-1 domain protein; hypothetical protein complement(207908..209674) Roseiflexus castenholzii DSM 13941 5537631 YP_001430323.1 CDS Rcas_0171 NC_009767.1 209736 210353 D PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_4586 phosphoglycerate mutase; phosphoglycerate mutase 209736..210353 Roseiflexus castenholzii DSM 13941 5537632 YP_001430324.1 CDS Rcas_0172 NC_009767.1 210451 210786 R PFAM: small multidrug resistance protein; KEGG: rrs:RoseRS_4585 small multidrug resistance protein; small multidrug resistance protein complement(210451..210786) Roseiflexus castenholzii DSM 13941 5537633 YP_001430325.1 CDS Rcas_0173 NC_009767.1 210820 211626 D TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: rrs:RoseRS_4584 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 210820..211626 Roseiflexus castenholzii DSM 13941 5537634 YP_001430326.1 CDS Rcas_0174 NC_009767.1 211949 212434 R KEGG: rrs:RoseRS_4583 hypothetical protein; hypothetical protein complement(211949..212434) Roseiflexus castenholzii DSM 13941 5537635 YP_001430327.1 CDS Rcas_0175 NC_009767.1 212519 213286 D KEGG: rrs:RoseRS_4582 hypothetical protein; hypothetical protein 212519..213286 Roseiflexus castenholzii DSM 13941 5537636 YP_001430328.1 CDS Rcas_0176 NC_009767.1 213383 213829 R KEGG: rrs:RoseRS_4581 hypothetical protein; hypothetical protein complement(213383..213829) Roseiflexus castenholzii DSM 13941 5537637 YP_001430329.1 CDS Rcas_0177 NC_009767.1 213927 214373 R KEGG: rrs:RoseRS_4580 hypothetical protein; hypothetical protein complement(213927..214373) Roseiflexus castenholzii DSM 13941 5537638 YP_001430330.1 CDS Rcas_0178 NC_009767.1 214755 215741 D PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_0089 conserved hypothetical protein 374; hypothetical protein 214755..215741 Roseiflexus castenholzii DSM 13941 5537639 YP_001430331.1 CDS Rcas_0179 NC_009767.1 215738 217084 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0088 amine oxidase; hypothetical protein 215738..217084 Roseiflexus castenholzii DSM 13941 5537640 YP_001430332.1 CDS Rcas_0180 NC_009767.1 217090 217428 D KEGG: rrs:RoseRS_0087 hypothetical protein; hypothetical protein 217090..217428 Roseiflexus castenholzii DSM 13941 5537641 YP_001430333.1 CDS Rcas_0181 NC_009767.1 217680 218657 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_0359 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 217680..218657 Roseiflexus castenholzii DSM 13941 5537642 YP_001430334.1 CDS Rcas_0182 NC_009767.1 218663 219784 D PFAM: glycoside hydrolase family 5; KEGG: aba:Acid345_1689 glycoside hydrolase, family 5; glycoside hydrolase family protein 218663..219784 Roseiflexus castenholzii DSM 13941 5537643 YP_001430335.1 CDS Rcas_0184 NC_009767.1 220980 221768 R PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_0361 hypothetical protein; RNA-binding S1 domain-containing protein complement(220980..221768) Roseiflexus castenholzii DSM 13941 5537645 YP_001430336.1 CDS Rcas_0185 NC_009767.1 221993 222952 R KEGG: rrs:RoseRS_0362 hypothetical protein; hypothetical protein complement(221993..222952) Roseiflexus castenholzii DSM 13941 5537646 YP_001430337.1 CDS Rcas_0186 NC_009767.1 222949 223425 R KEGG: rrs:RoseRS_0363 hypothetical protein; hypothetical protein complement(222949..223425) Roseiflexus castenholzii DSM 13941 5537647 YP_001430338.1 CDS Rcas_0187 NC_009767.1 223422 224489 R PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0364 protein of unknown function DUF324; hypothetical protein complement(223422..224489) Roseiflexus castenholzii DSM 13941 5537648 YP_001430339.1 CDS Rcas_0188 NC_009767.1 224482 225348 R TIGRFAM: CRISPR-associated RAMP protein, SSO1426 family; PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0365 CRISPR-associated RAMP protein, SSO1426 family; CRISPR-associated Csm3 family protein complement(224482..225348) Roseiflexus castenholzii DSM 13941 5537649 YP_001430340.1 CDS Rcas_0189 NC_009767.1 225338 225802 R KEGG: rrs:RoseRS_0366 hypothetical protein; hypothetical protein complement(225338..225802) Roseiflexus castenholzii DSM 13941 5537650 YP_001430341.1 CDS Rcas_0190 NC_009767.1 225783 226958 R KEGG: rrs:RoseRS_0367 hypothetical protein; hypothetical protein complement(225783..226958) Roseiflexus castenholzii DSM 13941 5537651 YP_001430342.1 CDS Rcas_0191 NC_009767.1 226958 227602 R PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_0368 protein of unknown function DUF324; hypothetical protein complement(226958..227602) Roseiflexus castenholzii DSM 13941 5537652 YP_001430343.1 CDS Rcas_0192 NC_009767.1 227583 229766 R KEGG: rrs:RoseRS_0369 hydrolase of the HD superfamily (permuted catalytic motifs)-like protein; hydrolase complement(227583..229766) Roseiflexus castenholzii DSM 13941 5537653 YP_001430344.1 CDS Rcas_0193 NC_009767.1 230217 231206 R KEGG: rrs:RoseRS_0370 hypothetical protein; hypothetical protein complement(230217..231206) Roseiflexus castenholzii DSM 13941 5537654 YP_001430345.1 CDS Rcas_0194 NC_009767.1 231851 233209 D KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 231851..233209 Roseiflexus castenholzii DSM 13941 5537655 YP_001430346.1 CDS Rcas_0195 NC_009767.1 233235 234803 R KEGG: rrs:RoseRS_0095 hypothetical protein; hypothetical protein complement(233235..234803) Roseiflexus castenholzii DSM 13941 5537656 YP_001430347.1 CDS Rcas_0196 NC_009767.1 234776 236122 R PFAM: peptidase M20; KEGG: rrs:RoseRS_0094 peptidase M20; peptidase M20 complement(234776..236122) Roseiflexus castenholzii DSM 13941 5537657 YP_001430348.1 CDS Rcas_0197 NC_009767.1 236232 238049 D PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0093 extracellular solute-binding protein, family 5; extracellular solute-binding protein 236232..238049 Roseiflexus castenholzii DSM 13941 5537658 YP_001430349.1 CDS Rcas_0198 NC_009767.1 238604 242422 D KEGG: rrs:RoseRS_0091 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 238604..242422 Roseiflexus castenholzii DSM 13941 5537659 YP_001430350.1 CDS Rcas_0199 NC_009767.1 242429 243553 R PFAM: nuclease (SNase domain protein); KEGG: rrs:RoseRS_0374 nuclease (SNase domain protein); nuclease complement(242429..243553) Roseiflexus castenholzii DSM 13941 5537660 YP_001430351.1 CDS Rcas_0200 NC_009767.1 243637 244752 R TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_3872 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(243637..244752) Roseiflexus castenholzii DSM 13941 5537661 YP_001430352.1 CDS Rcas_0201 NC_009767.1 245549 247930 R PFAM: Carbohydrate-binding CenC domain protein; Laminin G sub domain 2; SMART: Laminin G; LamG domain protein jellyroll fold domain protein; KEGG: rrs:RoseRS_3871 laminin G, sub domain 2; laminin G complement(245549..247930) Roseiflexus castenholzii DSM 13941 5537662 YP_001430353.1 CDS Rcas_0202 NC_009767.1 248862 249635 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3870 glycosyl transferase, family 2; glycosyl transferase family protein 248862..249635 Roseiflexus castenholzii DSM 13941 5537663 YP_001430354.1 CDS Rcas_0203 NC_009767.1 249681 250685 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3869 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 249681..250685 Roseiflexus castenholzii DSM 13941 5537664 YP_001430355.1 CDS Rcas_0204 NC_009767.1 250704 251861 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3868 glutamine--scyllo-inositol transaminase; glutamine--scyllo-inositol transaminase 250704..251861 Roseiflexus castenholzii DSM 13941 5537665 YP_001430356.1 CDS Rcas_0205 NC_009767.1 252151 254355 D KEGG: rrs:RoseRS_3867 hypothetical protein; hypothetical protein 252151..254355 Roseiflexus castenholzii DSM 13941 5537666 YP_001430357.1 CDS Rcas_0206 NC_009767.1 254408 254932 D PFAM: OsmC family protein; KEGG: rrs:RoseRS_3865 OsmC family protein; OsmC family protein 254408..254932 Roseiflexus castenholzii DSM 13941 5537667 YP_001430358.1 CDS Rcas_0207 NC_009767.1 255080 256603 R KEGG: rrs:RoseRS_0697 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase; inosine-5'-monophosphate dehydrogenase complement(255080..256603) Roseiflexus castenholzii DSM 13941 5537668 YP_001430359.1 CDS Rcas_0208 NC_009767.1 256814 258535 R KEGG: ana:all4128 unknown protein; hypothetical protein complement(256814..258535) Roseiflexus castenholzii DSM 13941 5537669 YP_001430360.1 CDS Rcas_0209 NC_009767.1 258894 259826 D PFAM: PfkB domain protein; KEGG: rrs:RoseRS_0693 1-phosphofructokinase; 1-phosphofructokinase 258894..259826 Roseiflexus castenholzii DSM 13941 5537671 YP_001430361.1 CDS Rcas_0210 NC_009767.1 259981 261024 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0692 ATPase associated with various cellular activities, AAA_3; ATPase 259981..261024 Roseiflexus castenholzii DSM 13941 5537672 YP_001430362.1 CDS Rcas_0211 NC_009767.1 261027 261710 R PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0691 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(261027..261710) Roseiflexus castenholzii DSM 13941 5537673 YP_001430363.1 CDS Rcas_0212 NC_009767.1 261991 263247 D PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_0690 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 261991..263247 Roseiflexus castenholzii DSM 13941 5537674 YP_001430364.1 CDS Rcas_0213 NC_009767.1 263360 264742 D KEGG: rrs:RoseRS_0689 hypothetical protein; hypothetical protein 263360..264742 Roseiflexus castenholzii DSM 13941 5537675 YP_001430365.1 CDS Rcas_0214 NC_009767.1 264776 265093 D KEGG: rrs:RoseRS_0688 hypothetical protein; hypothetical protein 264776..265093 Roseiflexus castenholzii DSM 13941 5537676 YP_001430366.1 CDS Rcas_0215 NC_009767.1 265160 271948 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein HAT helix repeating-containing protein; PBS lyase HEAT domain protein repeat-containing protein; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0687 tetratricopeptide TPR_2 repeat protein; hypothetical protein 265160..271948 Roseiflexus castenholzii DSM 13941 5537677 YP_001430367.1 CDS Rcas_0216 NC_009767.1 272115 274709 D PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rrs:RoseRS_0686 hypothetical protein; hypothetical protein 272115..274709 Roseiflexus castenholzii DSM 13941 5537678 YP_001430368.1 CDS Rcas_0217 NC_009767.1 274988 275689 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0685 protein of unknown function DUF820; hypothetical protein complement(274988..275689) Roseiflexus castenholzii DSM 13941 5537679 YP_001430369.1 CDS Rcas_0218 NC_009767.1 276017 277459 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0683 glycosyl transferase, group 1; group 1 glycosyl transferase complement(276017..277459) Roseiflexus castenholzii DSM 13941 5537680 YP_001430370.1 CDS Rcas_0219 NC_009767.1 277462 277938 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0682 NUDIX hydrolase; NUDIX hydrolase complement(277462..277938) Roseiflexus castenholzii DSM 13941 5537681 YP_001430371.1 CDS Rcas_0220 NC_009767.1 278059 278193 D KEGG: rrs:RoseRS_0681 hypothetical protein; hypothetical protein 278059..278193 Roseiflexus castenholzii DSM 13941 5537682 YP_001430372.1 CDS Rcas_0221 NC_009767.1 278200 279036 D PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0680 metallophosphoesterase; metallophosphoesterase 278200..279036 Roseiflexus castenholzii DSM 13941 5537683 YP_001430373.1 CDS Rcas_0222 NC_009767.1 279033 279581 D KEGG: rrs:RoseRS_0679 hypothetical protein; hypothetical protein 279033..279581 Roseiflexus castenholzii DSM 13941 5537684 YP_001430374.1 CDS Rcas_0223 NC_009767.1 279585 281126 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Forkhead-associated protein; KEGG: rrs:RoseRS_0678 peptidase S8 and S53, subtilisin, kexin, sedolisin; FHA domain-containing protein 279585..281126 Roseiflexus castenholzii DSM 13941 5537685 YP_001430375.1 CDS Rcas_0224 NC_009767.1 281852 282343 R KEGG: rrs:RoseRS_0607 hypothetical protein; hypothetical protein complement(281852..282343) Roseiflexus castenholzii DSM 13941 5537686 YP_001430376.1 CDS Rcas_0225 NC_009767.1 282538 283413 R KEGG: rrs:RoseRS_0608 hypothetical protein; hypothetical protein complement(282538..283413) Roseiflexus castenholzii DSM 13941 5537687 YP_001430377.1 CDS Rcas_0226 NC_009767.1 283406 284323 R PFAM: ApbE family lipoprotein; KEGG: rrs:RoseRS_0609 ApbE family lipoprotein; ApbE family lipoprotein complement(283406..284323) Roseiflexus castenholzii DSM 13941 5537688 YP_001430378.1 CDS Rcas_0227 NC_009767.1 284371 284790 R KEGG: rrs:RoseRS_0610 hypothetical protein; hypothetical protein complement(284371..284790) Roseiflexus castenholzii DSM 13941 5537689 YP_001430379.1 CDS Rcas_0228 NC_009767.1 285008 285832 R PFAM: Propeptide PepSY amd peptidase M4; KEGG: rrs:RoseRS_0611 propeptide, PepSY amd peptidase M4; peptidase complement(285008..285832) Roseiflexus castenholzii DSM 13941 5537690 YP_001430380.1 CDS Rcas_0229 NC_009767.1 285998 286681 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0612 two component transcriptional regulator, winged helix family; two component transcriptional regulator 285998..286681 Roseiflexus castenholzii DSM 13941 5537691 YP_001430381.1 CDS Rcas_0230 NC_009767.1 286674 288101 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0613 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 286674..288101 Roseiflexus castenholzii DSM 13941 5537692 YP_001430382.1 CDS Rcas_0231 NC_009767.1 288298 288729 R KEGG: det:DET0408 cation channel family protein; cation channel family protein complement(288298..288729) Roseiflexus castenholzii DSM 13941 5537693 YP_001430383.1 CDS Rcas_0232 NC_009767.1 288729 289787 R PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: rrs:RoseRS_0349 peptidase M42 family protein; peptidase M42 family protein complement(288729..289787) Roseiflexus castenholzii DSM 13941 5537694 YP_001430384.1 CDS Rcas_0233 NC_009767.1 290020 290274 R hypothetical protein complement(290020..290274) Roseiflexus castenholzii DSM 13941 5537695 YP_001430385.1 CDS Rcas_0234 NC_009767.1 290346 291398 D PFAM: proline racemase; KEGG: sus:Acid_6579 proline racemase; proline racemase 290346..291398 Roseiflexus castenholzii DSM 13941 5537696 YP_001430386.1 CDS Rcas_0235 NC_009767.1 291520 292656 R KEGG: rrs:RoseRS_0306 hypothetical protein; hypothetical protein complement(291520..292656) Roseiflexus castenholzii DSM 13941 5537697 YP_001430387.1 CDS Rcas_0236 NC_009767.1 292656 293939 R PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: rrs:RoseRS_0307 glycoside hydrolase, family 18; glycoside hydrolase family protein complement(292656..293939) Roseiflexus castenholzii DSM 13941 5537698 YP_001430388.1 CDS Rcas_0237 NC_009767.1 293967 294332 R PFAM: protein of unknown function DUF1025; KEGG: rrs:RoseRS_0308 protein of unknown function DUF1025; hypothetical protein complement(293967..294332) Roseiflexus castenholzii DSM 13941 5537699 YP_001430389.1 CDS Rcas_0238 NC_009767.1 294460 295053 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0309 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(294460..295053) Roseiflexus castenholzii DSM 13941 5537700 YP_001430390.1 CDS Rcas_0239 NC_009767.1 295732 296388 D TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rrs:RoseRS_0310 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 295732..296388 Roseiflexus castenholzii DSM 13941 5537701 YP_001430391.1 CDS Rcas_0240 NC_009767.1 296385 296666 D catalyzes the hydrolysis of acylphosphate; acylphosphatase 296385..296666 Roseiflexus castenholzii DSM 13941 5537702 YP_001430392.1 CDS Rcas_0241 NC_009767.1 296656 297480 R PFAM: luciferase family protein; KEGG: mbo:Mb0815c hypothetical protein; luciferase family protein complement(296656..297480) Roseiflexus castenholzii DSM 13941 5537703 YP_001430393.1 CDS Rcas_0242 NC_009767.1 297647 298492 D KEGG: rrs:RoseRS_0312 hypothetical protein; hypothetical protein 297647..298492 Roseiflexus castenholzii DSM 13941 5537704 YP_001430394.1 CDS Rcas_0243 NC_009767.1 298994 299434 D KEGG: rrs:RoseRS_0313 hypothetical protein; hypothetical protein 298994..299434 Roseiflexus castenholzii DSM 13941 5537705 YP_001430395.1 CDS Rcas_0244 NC_009767.1 299460 300173 D KEGG: rrs:RoseRS_0314 hypothetical protein; hypothetical protein 299460..300173 Roseiflexus castenholzii DSM 13941 5537706 YP_001430396.1 CDS Rcas_0245 NC_009767.1 300654 303134 R PFAM: transglutaminase domain protein; KEGG: rrs:RoseRS_0315 transglutaminase domain protein; transglutaminase domain-containing protein complement(300654..303134) Roseiflexus castenholzii DSM 13941 5537707 YP_001430397.1 CDS Rcas_0246 NC_009767.1 303131 303907 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; amidohydrolase 2; KEGG: rrs:RoseRS_0316 hydrolase, TatD family; TatD family hydrolase complement(303131..303907) Roseiflexus castenholzii DSM 13941 5537708 YP_001430398.1 CDS Rcas_0247 NC_009767.1 303969 305192 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0317 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 303969..305192 Roseiflexus castenholzii DSM 13941 5537709 YP_001430399.1 CDS Rcas_0248 NC_009767.1 305352 305930 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: rrs:RoseRS_0318 uracil-DNA glycosylase superfamily; uracil-DNA glycosylase 305352..305930 Roseiflexus castenholzii DSM 13941 5537710 YP_001430400.1 CDS Rcas_0249 NC_009767.1 305927 307078 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_0319 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 305927..307078 Roseiflexus castenholzii DSM 13941 5537711 YP_001430401.1 CDS Rcas_0250 NC_009767.1 307381 308346 R KEGG: rrs:RoseRS_0294 hypothetical protein; hypothetical protein complement(307381..308346) Roseiflexus castenholzii DSM 13941 5537712 YP_001430402.1 CDS Rcas_0251 NC_009767.1 308356 309870 R PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: rrs:RoseRS_0293 peptidase M1, membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase complement(308356..309870) Roseiflexus castenholzii DSM 13941 5537713 YP_001430403.1 CDS Rcas_0252 NC_009767.1 309959 310615 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_0292 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 309959..310615 Roseiflexus castenholzii DSM 13941 5537714 YP_001430404.1 CDS Rcas_0253 NC_009767.1 310955 311191 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_0291 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 310955..311191 Roseiflexus castenholzii DSM 13941 5537715 YP_001430405.1 CDS Rcas_0254 NC_009767.1 311923 312399 D KEGG: rrs:RoseRS_0290 hypothetical protein; hypothetical protein 311923..312399 Roseiflexus castenholzii DSM 13941 5537716 YP_001430406.1 CDS Rcas_0255 NC_009767.1 312484 313557 D dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 312484..313557 Roseiflexus castenholzii DSM 13941 5537717 YP_001430407.1 CDS Rcas_0256 NC_009767.1 313588 315546 D KEGG: rrs:RoseRS_0288 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 313588..315546 Roseiflexus castenholzii DSM 13941 5537718 YP_001430408.1 CDS Rcas_0257 NC_009767.1 315712 317337 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: Bacterio-opsin activator HTH domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_0287 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 315712..317337 Roseiflexus castenholzii DSM 13941 5537719 YP_001430409.1 CDS Rcas_0258 NC_009767.1 317384 318739 D PFAM: heat shock protein DnaJ domain protein; KEGG: rrs:RoseRS_0286 heat shock protein DnaJ domain protein; molecular chaperone DnaJ 317384..318739 Roseiflexus castenholzii DSM 13941 5537720 YP_001430410.1 CDS Rcas_0259 NC_009767.1 318739 319881 D KEGG: rrs:RoseRS_0285 glycoside hydrolase, family 42, N-terminal domain protein; glycoside hydrolase family 42 protein 318739..319881 Roseiflexus castenholzii DSM 13941 5537721 YP_001430411.1 CDS Rcas_0260 NC_009767.1 320038 320673 D KEGG: rrs:RoseRS_0284 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; molybdopterin-guanine dinucleotide biosynthesis protein A-like protein 320038..320673 Roseiflexus castenholzii DSM 13941 5537722 YP_001430412.1 CDS Rcas_0261 NC_009767.1 320673 322208 D KEGG: rrs:RoseRS_0283 hypothetical protein; hypothetical protein 320673..322208 Roseiflexus castenholzii DSM 13941 5537723 YP_001430413.1 CDS Rcas_0262 NC_009767.1 322195 323031 D KEGG: rrs:RoseRS_0282 hypothetical protein; hypothetical protein 322195..323031 Roseiflexus castenholzii DSM 13941 5537724 YP_001430414.1 CDS Rcas_0263 NC_009767.1 324618 326192 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(324618..326192) Roseiflexus castenholzii DSM 13941 5537725 YP_001430415.1 CDS Rcas_0264 NC_009767.1 326968 329346 R PFAM: regulator of chromosome condensation RCC1; KEGG: rrs:RoseRS_0421 regulator of chromosome condensation, RCC1; regulator of chromosome condensation RCC1 complement(326968..329346) Roseiflexus castenholzii DSM 13941 5537726 YP_001430416.1 CDS Rcas_0265 NC_009767.1 330058 332067 D PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: rrs:RoseRS_0270 TAP domain protein; TAP domain-containing protein 330058..332067 Roseiflexus castenholzii DSM 13941 5537727 YP_001430417.1 CDS Rcas_0266 NC_009767.1 332392 333636 R PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_0269 protein of unknown function DUF214; hypothetical protein complement(332392..333636) Roseiflexus castenholzii DSM 13941 5537728 YP_001430418.1 CDS Rcas_0267 NC_009767.1 333643 334476 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0268 ABC transporter related; ABC transporter-like protein complement(333643..334476) Roseiflexus castenholzii DSM 13941 5537729 YP_001430419.1 CDS Rcas_0268 NC_009767.1 334542 336305 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_0267 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(334542..336305) Roseiflexus castenholzii DSM 13941 5537730 YP_001430420.1 CDS Rcas_0269 NC_009767.1 336394 337017 R PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0266 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(336394..337017) Roseiflexus castenholzii DSM 13941 5537731 YP_001430421.1 CDS Rcas_0270 NC_009767.1 337614 337820 R KEGG: gvi:gsr0563 unknown protein; hypothetical protein complement(337614..337820) Roseiflexus castenholzii DSM 13941 5537732 YP_001430422.1 CDS Rcas_0271 NC_009767.1 337817 338101 R KEGG: gvi:gsr0562 unknown protein; hypothetical protein complement(337817..338101) Roseiflexus castenholzii DSM 13941 5537733 YP_001430423.1 CDS Rcas_0272 NC_009767.1 338405 339958 R PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_0265 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase complement(338405..339958) Roseiflexus castenholzii DSM 13941 5537734 YP_001430424.1 CDS Rcas_0273 NC_009767.1 339936 340355 R hypothetical protein complement(339936..340355) Roseiflexus castenholzii DSM 13941 5537735 YP_001430425.1 CDS Rcas_0274 NC_009767.1 340472 341791 D PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0263 extracellular solute-binding protein, family 1; extracellular solute-binding protein 340472..341791 Roseiflexus castenholzii DSM 13941 5537736 YP_001430426.1 CDS Rcas_0275 NC_009767.1 342152 342592 D KEGG: rrs:RoseRS_0262 hypothetical protein; hypothetical protein 342152..342592 Roseiflexus castenholzii DSM 13941 5537737 YP_001430427.1 CDS Rcas_0276 NC_009767.1 342589 344184 D KEGG: gme:Gmet_0588 TPR repeat protein; hypothetical protein 342589..344184 Roseiflexus castenholzii DSM 13941 5537738 YP_001430428.1 CDS Rcas_0277 NC_009767.1 344712 345023 R hypothetical protein complement(344712..345023) Roseiflexus castenholzii DSM 13941 5537739 YP_001430429.1 CDS Rcas_0278 NC_009767.1 345122 345454 R PFAM: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0258 transcriptional regulator, XRE family; XRE family transcriptional regulator complement(345122..345454) Roseiflexus castenholzii DSM 13941 5537740 YP_001430430.1 CDS Rcas_0279 NC_009767.1 345633 346259 D KEGG: rrs:RoseRS_0257 hypothetical protein; hypothetical protein 345633..346259 Roseiflexus castenholzii DSM 13941 5537741 YP_001430431.1 CDS Rcas_0280 NC_009767.1 346410 346775 D PFAM: zinc finger DksA/TraR C4-type; KEGG: rrs:RoseRS_0256 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 346410..346775 Roseiflexus castenholzii DSM 13941 5537742 YP_001430432.1 CDS Rcas_0281 NC_009767.1 347333 347908 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 347333..347908 Roseiflexus castenholzii DSM 13941 5537743 YP_001430433.1 CDS Rcas_0282 NC_009767.1 348141 349088 D KEGG: rrs:RoseRS_0254 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 348141..349088 Roseiflexus castenholzii DSM 13941 5537744 YP_001430434.1 CDS Rcas_0283 NC_009767.1 349705 350634 D Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 349705..350634 Roseiflexus castenholzii DSM 13941 5537745 YP_001430435.1 CDS Rcas_0284 NC_009767.1 350981 352756 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_0252 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 350981..352756 Roseiflexus castenholzii DSM 13941 5537746 YP_001430436.1 CDS Rcas_0285 NC_009767.1 352753 353661 D KEGG: rrs:RoseRS_0251 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; dimethyladenosine transferase 352753..353661 Roseiflexus castenholzii DSM 13941 5537747 YP_001430437.1 CDS Rcas_0286 NC_009767.1 354092 354769 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_0250 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase complement(354092..354769) Roseiflexus castenholzii DSM 13941 5537748 YP_001430438.1 CDS Rcas_0287 NC_009767.1 354791 356029 R TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0249 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator complement(354791..356029) Roseiflexus castenholzii DSM 13941 5537749 YP_001430439.1 CDS Rcas_0288 NC_009767.1 356838 357866 D PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0248 metallophosphoesterase; metallophosphoesterase 356838..357866 Roseiflexus castenholzii DSM 13941 5537750 YP_001430440.1 CDS Rcas_0289 NC_009767.1 358610 359035 D KEGG: rrs:RoseRS_0246 hypothetical protein; hypothetical protein 358610..359035 Roseiflexus castenholzii DSM 13941 5537751 YP_001430441.1 CDS Rcas_0290 NC_009767.1 359131 359793 D PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_0245 phosphoglycerate mutase; phosphoglycerate mutase 359131..359793 Roseiflexus castenholzii DSM 13941 5537752 YP_001430442.1 CDS Rcas_0291 NC_009767.1 359780 360463 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rrs:RoseRS_0244 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 359780..360463 Roseiflexus castenholzii DSM 13941 5537753 YP_001430443.1 CDS Rcas_0292 NC_009767.1 360543 363041 D PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0243 glycosyl transferase, family 39; glycosyl transferase family protein 360543..363041 Roseiflexus castenholzii DSM 13941 5537754 YP_001430444.1 CDS Rcas_0293 NC_009767.1 363141 366632 D PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_0242 NHL repeat containing protein; NHL repeat-containing protein 363141..366632 Roseiflexus castenholzii DSM 13941 5537755 YP_001430445.1 CDS Rcas_0294 NC_009767.1 366768 366983 R TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: rrs:RoseRS_0698 copper ion binding protein; copper ion binding protein complement(366768..366983) Roseiflexus castenholzii DSM 13941 5537756 YP_001430446.1 CDS Rcas_0295 NC_009767.1 367213 368679 D catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 367213..368679 Roseiflexus castenholzii DSM 13941 5537757 YP_001430447.1 CDS Rcas_0296 NC_009767.1 368692 369540 D KEGG: rrs:RoseRS_0700 hypothetical protein; hypothetical protein 368692..369540 Roseiflexus castenholzii DSM 13941 5537758 YP_001430448.1 CDS Rcas_0297 NC_009767.1 369541 370353 D KEGG: rrs:RoseRS_0701 membrane protein-like protein; hypothetical protein 369541..370353 Roseiflexus castenholzii DSM 13941 5537759 YP_001430449.1 CDS Rcas_0298 NC_009767.1 371030 372025 R PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_0702 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase complement(371030..372025) Roseiflexus castenholzii DSM 13941 5537760 YP_001430450.1 CDS Rcas_0299 NC_009767.1 372303 373475 D PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_0703 aminotransferase, class I and II; class I/II aminotransferase 372303..373475 Roseiflexus castenholzii DSM 13941 5537761 YP_001430451.1 CDS Rcas_0300 NC_009767.1 375202 376044 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rrs:RoseRS_0704 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; 6-pyruvoyl tetrahydropterin synthase 375202..376044 Roseiflexus castenholzii DSM 13941 5537762 YP_001430452.1 CDS Rcas_0301 NC_009767.1 376114 376791 D PFAM: GTP cyclohydrolase I; KEGG: rrs:RoseRS_0705 GTP cyclohydrolase I; GTP cyclohydrolase I 376114..376791 Roseiflexus castenholzii DSM 13941 5537763 YP_001430453.1 CDS Rcas_0302 NC_009767.1 377364 378062 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0706 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 377364..378062 Roseiflexus castenholzii DSM 13941 5537764 YP_001430454.1 CDS Rcas_0303 NC_009767.1 379069 379698 D PFAM: regulatory protein MarR; regulatory protein DeoR; regulatory protein ArsR; transcriptional regulator TrmB; KEGG: rrs:RoseRS_0707 transcriptional regulator, TrmB; transcriptional regulator TrmB 379069..379698 Roseiflexus castenholzii DSM 13941 5537765 YP_001430455.1 CDS Rcas_0304 NC_009767.1 379755 380537 D KEGG: rrs:RoseRS_0708 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; FeS assembly ATPase SufC 379755..380537 Roseiflexus castenholzii DSM 13941 5537766 YP_001430456.1 CDS Rcas_0305 NC_009767.1 380534 381751 D TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: rrs:RoseRS_0709 FeS assembly protein SufD; FeS assembly protein SufD 380534..381751 Roseiflexus castenholzii DSM 13941 5537767 YP_001430457.1 CDS Rcas_0306 NC_009767.1 381822 383066 D TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0710 cysteine desulfurase, SufS subfamily; SufS subfamily cysteine desulfurase 381822..383066 Roseiflexus castenholzii DSM 13941 5537768 YP_001430458.1 CDS Rcas_0307 NC_009767.1 383072 383470 D TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: rrs:RoseRS_0711 SUF system FeS assembly protein, NifU family; NifU family SUF system FeS assembly protein 383072..383470 Roseiflexus castenholzii DSM 13941 5537769 YP_001430459.1 CDS Rcas_0308 NC_009767.1 383498 384913 D TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: rrs:RoseRS_0712 FeS assembly protein SufB; FeS assembly protein SufB 383498..384913 Roseiflexus castenholzii DSM 13941 5537770 YP_001430460.1 CDS Rcas_0309 NC_009767.1 385266 385994 R KEGG: rrs:RoseRS_1209 hypothetical protein; hypothetical protein complement(385266..385994) Roseiflexus castenholzii DSM 13941 5537771 YP_001430461.1 CDS Rcas_0310 NC_009767.1 386385 386795 D KEGG: rrs:RoseRS_0715 hypothetical protein; hypothetical protein 386385..386795 Roseiflexus castenholzii DSM 13941 5537772 YP_001430462.1 CDS Rcas_0311 NC_009767.1 386968 387285 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0716 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein 386968..387285 Roseiflexus castenholzii DSM 13941 5537773 YP_001430463.1 CDS Rcas_0312 NC_009767.1 387380 388225 D PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_0717 rhodanese domain protein; rhodanese domain-containing protein 387380..388225 Roseiflexus castenholzii DSM 13941 5537774 YP_001430464.1 CDS Rcas_0313 NC_009767.1 388230 388688 D PFAM: Fe-S metabolism associated SufE; KEGG: rrs:RoseRS_0718 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 388230..388688 Roseiflexus castenholzii DSM 13941 5537775 YP_001430465.1 CDS Rcas_0314 NC_009767.1 388688 389092 D TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: rrs:RoseRS_0719 nitrogen-fixing NifU domain protein; NifU family SUF system FeS assembly protein 388688..389092 Roseiflexus castenholzii DSM 13941 5537776 YP_001430466.1 CDS Rcas_0315 NC_009767.1 389082 390038 D TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_0720 cysteine synthase; cysteine synthase 389082..390038 Roseiflexus castenholzii DSM 13941 5537777 YP_001430467.1 CDS Rcas_0316 NC_009767.1 390242 390718 D PFAM: Mov34/MPN/PAD-1 family protein; KEGG: rrs:RoseRS_0721 Mov34/MPN/PAD-1 family protein; Mov34/MPN/PAD-1 family protein 390242..390718 Roseiflexus castenholzii DSM 13941 5537778 YP_001430468.1 CDS Rcas_0317 NC_009767.1 390936 391217 D PFAM: thiamineS protein; KEGG: rrs:RoseRS_0722 thiamineS protein; hypothetical protein 390936..391217 Roseiflexus castenholzii DSM 13941 5537779 YP_001430469.1 CDS Rcas_0318 NC_009767.1 391241 392392 D PFAM: UBA/THIF-type NAD/FAD binding protein; Rhodanese domain protein; MoeZ/MoeB domain protein; KEGG: rrs:RoseRS_0723 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 391241..392392 Roseiflexus castenholzii DSM 13941 5537780 YP_001430470.1 CDS secG NC_009767.1 392463 392672 D KEGG: rrs:RoseRS_0724 hypothetical protein; preprotein translocase subunit SecG 392463..392672 Roseiflexus castenholzii DSM 13941 5537781 YP_001430471.1 CDS Rcas_0320 NC_009767.1 392797 394467 D PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0725 extracellular solute-binding protein, family 5; extracellular solute-binding protein 392797..394467 Roseiflexus castenholzii DSM 13941 5537782 YP_001430472.1 CDS Rcas_0321 NC_009767.1 394720 395586 D PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_0726 rhodanese domain protein; rhodanese domain-containing protein 394720..395586 Roseiflexus castenholzii DSM 13941 5537783 YP_001430473.1 CDS Rcas_0322 NC_009767.1 396028 399267 D TIGRFAM: isoleucyl-tRNA synthetase; KEGG: rrs:RoseRS_0727 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 396028..399267 Roseiflexus castenholzii DSM 13941 5537784 YP_001430474.1 CDS Rcas_0323 NC_009767.1 399463 400617 D hypothetical protein 399463..400617 Roseiflexus castenholzii DSM 13941 5537785 YP_001430475.1 CDS Rcas_0324 NC_009767.1 400642 401307 R hypothetical protein complement(400642..401307) Roseiflexus castenholzii DSM 13941 5537786 YP_001430476.1 CDS Rcas_0326 NC_009767.1 402273 403154 D KEGG: mlo:mlr4706 hypothetical protein; hypothetical protein 402273..403154 Roseiflexus castenholzii DSM 13941 5537788 YP_001430477.1 CDS Rcas_0327 NC_009767.1 403157 403870 D PFAM: Gp37Gp68 family protein; KEGG: cph:Cpha266_1493 phage Gp37Gp68 family protein; Gp37Gp68 family protein 403157..403870 Roseiflexus castenholzii DSM 13941 5537789 YP_001430478.1 CDS Rcas_0328 NC_009767.1 403944 406415 R KEGG: rrs:RoseRS_0729 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A complement(403944..406415) Roseiflexus castenholzii DSM 13941 5537790 YP_001430479.1 CDS Rcas_0329 NC_009767.1 406538 407269 R PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0730 metallophosphoesterase; metallophosphoesterase complement(406538..407269) Roseiflexus castenholzii DSM 13941 5537791 YP_001430480.1 CDS Rcas_0330 NC_009767.1 407298 408014 R PFAM: phosphoadenosine phosphosulfate reductase; KEGG: rrs:RoseRS_0739 phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase complement(407298..408014) Roseiflexus castenholzii DSM 13941 5537792 YP_001430481.1 CDS Rcas_0331 NC_009767.1 408326 409756 R KEGG: rrs:RoseRS_0740 hypothetical protein; hypothetical protein complement(408326..409756) Roseiflexus castenholzii DSM 13941 5537793 YP_001430482.1 CDS Rcas_0332 NC_009767.1 409769 410287 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(409769..410287) Roseiflexus castenholzii DSM 13941 5537794 YP_001430483.1 CDS panC NC_009767.1 410674 411510 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(410674..411510) Roseiflexus castenholzii DSM 13941 5537795 YP_001430484.1 CDS panB NC_009767.1 411517 412353 R catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(411517..412353) Roseiflexus castenholzii DSM 13941 5537796 YP_001430485.1 CDS Rcas_0335 NC_009767.1 412429 412797 R PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0746 roadblock/LC7 family protein; roadblock/LC7 family protein complement(412429..412797) Roseiflexus castenholzii DSM 13941 5537797 YP_001430486.1 CDS Rcas_0336 NC_009767.1 413083 415416 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1529 protein kinase; serine/threonine protein kinase complement(413083..415416) Roseiflexus castenholzii DSM 13941 5537798 YP_001430487.1 CDS Rcas_0337 NC_009767.1 416185 417195 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0062 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(416185..417195) Roseiflexus castenholzii DSM 13941 5537799 YP_001430488.1 CDS Rcas_0338 NC_009767.1 417185 420766 R PFAM: transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_0063 transcriptional regulator, ATPase, winged helix family; transcriptional regulator complement(417185..420766) Roseiflexus castenholzii DSM 13941 5537800 YP_001430489.1 CDS Rcas_0339 NC_009767.1 421132 423015 D TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: rrs:RoseRS_0100 GTP-binding protein TypA; GTP-binding protein TypA 421132..423015 Roseiflexus castenholzii DSM 13941 5537801 YP_001430490.1 CDS Rcas_0340 NC_009767.1 423169 424647 D KEGG: rrs:RoseRS_4116 allergen V5/TPX-1 family protein; hypothetical protein 423169..424647 Roseiflexus castenholzii DSM 13941 5537802 YP_001430491.1 CDS Rcas_0341 NC_009767.1 424999 425295 D hypothetical protein 424999..425295 Roseiflexus castenholzii DSM 13941 5537803 YP_001430492.1 CDS Rcas_0342 NC_009767.1 425502 425759 R PFAM: acyl-coA-binding protein ACBP; KEGG: rrs:RoseRS_0103 acyl-coA-binding protein, ACBP; acyl-CoA-binding protein complement(425502..425759) Roseiflexus castenholzii DSM 13941 5537804 YP_001430493.1 CDS Rcas_0343 NC_009767.1 425762 426766 R PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0104 asparaginase; asparaginase complement(425762..426766) Roseiflexus castenholzii DSM 13941 5537805 YP_001430494.1 CDS Rcas_0344 NC_009767.1 426799 427398 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rrs:RoseRS_0105 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase complement(426799..427398) Roseiflexus castenholzii DSM 13941 5537806 YP_001430495.1 CDS Rcas_0345 NC_009767.1 427400 428119 R KEGG: rrs:RoseRS_0106 hypothetical protein; hypothetical protein complement(427400..428119) Roseiflexus castenholzii DSM 13941 5537807 YP_001430496.1 CDS Rcas_0346 NC_009767.1 428132 428857 R KEGG: rrs:RoseRS_0107 hypothetical protein; hypothetical protein complement(428132..428857) Roseiflexus castenholzii DSM 13941 5537808 YP_001430497.1 CDS Rcas_0347 NC_009767.1 429021 430202 R TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_0108 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA complement(429021..430202) Roseiflexus castenholzii DSM 13941 5537809 YP_001430498.1 CDS Rcas_0348 NC_009767.1 430192 430443 R KEGG: rrs:RoseRS_0109 hypothetical protein; hypothetical protein complement(430192..430443) Roseiflexus castenholzii DSM 13941 5537810 YP_001430499.1 CDS Rcas_0349 NC_009767.1 430457 432244 R TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: rrs:RoseRS_0110 threonyl-tRNA synthetase; threonyl-tRNA synthetase complement(430457..432244) Roseiflexus castenholzii DSM 13941 5537811 YP_001430500.1 CDS Rcas_0350 NC_009767.1 432262 432849 R KEGG: rrs:RoseRS_0111 hypothetical protein; hypothetical protein complement(432262..432849) Roseiflexus castenholzii DSM 13941 5537812 YP_001430501.1 CDS Rcas_0351 NC_009767.1 433432 435711 R PFAM: Na+/solute symporter; KEGG: rrs:RoseRS_0112 Na+/solute symporter; Na+/solute symporter complement(433432..435711) Roseiflexus castenholzii DSM 13941 5537813 YP_001430502.1 CDS Rcas_0352 NC_009767.1 435774 436925 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0113 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(435774..436925) Roseiflexus castenholzii DSM 13941 5537814 YP_001430503.1 CDS Rcas_0353 NC_009767.1 437101 437793 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0114 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(437101..437793) Roseiflexus castenholzii DSM 13941 5537815 YP_001430504.1 CDS Rcas_0354 NC_009767.1 438285 438866 R PFAM: protein of unknown function DUF151; KEGG: rrs:RoseRS_0115 protein of unknown function DUF151; hypothetical protein complement(438285..438866) Roseiflexus castenholzii DSM 13941 5537816 YP_001430505.1 CDS Rcas_0355 NC_009767.1 439138 439938 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_0116 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 439138..439938 Roseiflexus castenholzii DSM 13941 5537817 YP_001430506.1 CDS Rcas_0356 NC_009767.1 439935 440840 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rrs:RoseRS_0117 ParB-like partition protein; parB-like partition protein 439935..440840 Roseiflexus castenholzii DSM 13941 5537818 YP_001430507.1 CDS Rcas_0357 NC_009767.1 441402 442328 D PFAM: PfkB domain protein; KEGG: bth:BT_3576 ribokinase; ribokinase-like domain-containing protein 441402..442328 Roseiflexus castenholzii DSM 13941 5537819 YP_001430508.1 CDS Rcas_0358 NC_009767.1 442325 442951 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: afu:AF1744 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (PgsA-2); CDP-alcohol phosphatidyltransferase 442325..442951 Roseiflexus castenholzii DSM 13941 5537820 YP_001430509.1 CDS Rcas_0359 NC_009767.1 443007 443804 D hypothetical protein 443007..443804 Roseiflexus castenholzii DSM 13941 5537821 YP_001430510.1 CDS Rcas_0360 NC_009767.1 443972 445921 D hypothetical protein 443972..445921 Roseiflexus castenholzii DSM 13941 5537822 YP_001430511.1 CDS Rcas_0361 NC_009767.1 445980 447785 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rrs:RoseRS_0119 DNA repair protein RecN; DNA repair protein RecN 445980..447785 Roseiflexus castenholzii DSM 13941 5537823 YP_001430512.1 CDS Rcas_0362 NC_009767.1 447823 451050 D PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0120 TPR repeat-containing protein; hypothetical protein 447823..451050 Roseiflexus castenholzii DSM 13941 5537824 YP_001430513.1 CDS Rcas_0363 NC_009767.1 451429 452352 D PFAM: Auxin Efflux Carrier; KEGG: rrs:RoseRS_0121 auxin efflux carrier; auxin efflux carrier 451429..452352 Roseiflexus castenholzii DSM 13941 5537825 YP_001430514.1 CDS Rcas_0364 NC_009767.1 452546 453142 D PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: rrs:RoseRS_0122 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 452546..453142 Roseiflexus castenholzii DSM 13941 5537826 YP_001430515.1 CDS Rcas_0365 NC_009767.1 453152 454486 D TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_0123 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 453152..454486 Roseiflexus castenholzii DSM 13941 5537827 YP_001430516.1 CDS Rcas_0366 NC_009767.1 455658 455963 R hypothetical protein complement(455658..455963) Roseiflexus castenholzii DSM 13941 5537828 YP_001430517.1 CDS Rcas_0367 NC_009767.1 456114 458837 D TIGRFAM: valyl-tRNA synthetase; KEGG: rrs:RoseRS_0129 valyl-tRNA synthetase; valyl-tRNA synthetase 456114..458837 Roseiflexus castenholzii DSM 13941 5537829 YP_001430518.1 CDS Rcas_0368 NC_009767.1 458834 459877 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_0130 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 458834..459877 Roseiflexus castenholzii DSM 13941 5537830 YP_001430519.1 CDS Rcas_0369 NC_009767.1 459943 461013 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_0131 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 459943..461013 Roseiflexus castenholzii DSM 13941 5537831 YP_001430520.1 CDS Rcas_0370 NC_009767.1 461025 462584 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rrs:RoseRS_0132 integral membrane protein MviN; integral membrane protein MviN 461025..462584 Roseiflexus castenholzii DSM 13941 5537832 YP_001430521.1 CDS Rcas_0371 NC_009767.1 462889 463896 D PFAM: Bile acid:sodium symporter; KEGG: lic:LIC12384 sodium bile acid symporter family protein; bile acid:sodium symporter 462889..463896 Roseiflexus castenholzii DSM 13941 5537833 YP_001430522.1 CDS Rcas_0372 NC_009767.1 464118 466865 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: cph:Cpha266_0173 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase 464118..466865 Roseiflexus castenholzii DSM 13941 5537834 YP_001430523.1 CDS Rcas_0373 NC_009767.1 467007 468104 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0135 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(467007..468104) Roseiflexus castenholzii DSM 13941 5537835 YP_001430524.1 CDS Rcas_0374 NC_009767.1 468451 468876 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_4608 response regulator receiver protein; response regulator receiver protein complement(468451..468876) Roseiflexus castenholzii DSM 13941 5537836 YP_001430525.1 CDS Rcas_0375 NC_009767.1 469072 470007 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4607 glycosyl transferase, family 2; glycosyl transferase family protein 469072..470007 Roseiflexus castenholzii DSM 13941 5537837 YP_001430526.1 CDS Rcas_0376 NC_009767.1 470004 470807 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4606 glycosyl transferase, family 2; glycosyl transferase family protein 470004..470807 Roseiflexus castenholzii DSM 13941 5537838 YP_001430527.1 CDS Rcas_0377 NC_009767.1 470833 471777 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4605 glycosyl transferase, family 2; glycosyl transferase family protein 470833..471777 Roseiflexus castenholzii DSM 13941 5537839 YP_001430528.1 CDS Rcas_0378 NC_009767.1 474586 476223 D PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4604 protein kinase; TPR repeat-containing serine/threonine protein kinase 474586..476223 Roseiflexus castenholzii DSM 13941 5537840 YP_001430529.1 CDS Rcas_0379 NC_009767.1 476382 477629 D PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_4603 beta-ketoacyl synthase; beta-ketoacyl synthase 476382..477629 Roseiflexus castenholzii DSM 13941 5537841 YP_001430530.1 CDS Rcas_0380 NC_009767.1 477613 478317 D PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: rrs:RoseRS_4602 ribonuclease III; ribonuclease III 477613..478317 Roseiflexus castenholzii DSM 13941 5537842 YP_001430531.1 CDS Rcas_0381 NC_009767.1 478401 479246 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_4601 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 478401..479246 Roseiflexus castenholzii DSM 13941 5537843 YP_001430532.1 CDS Rcas_0382 NC_009767.1 479376 480041 D PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_4600 PBS lyase heat domain protein repeat-containing protein; PBS lyase 479376..480041 Roseiflexus castenholzii DSM 13941 5537844 YP_001430533.1 CDS Rcas_0383 NC_009767.1 480347 482203 D PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_4599 extracellular solute-binding protein, family 5; extracellular solute-binding protein 480347..482203 Roseiflexus castenholzii DSM 13941 5537845 YP_001430534.1 CDS Rcas_0384 NC_009767.1 482279 483238 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4598 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 482279..483238 Roseiflexus castenholzii DSM 13941 5537846 YP_001430535.1 CDS Rcas_0385 NC_009767.1 483263 484294 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4597 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 483263..484294 Roseiflexus castenholzii DSM 13941 5537847 YP_001430536.1 CDS Rcas_0386 NC_009767.1 484334 486691 R SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_4596 protein kinase; serine/threonine protein kinase complement(484334..486691) Roseiflexus castenholzii DSM 13941 5537848 YP_001430537.1 CDS Rcas_0387 NC_009767.1 487058 487816 D PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0145 NUDIX hydrolase; NUDIX hydrolase 487058..487816 Roseiflexus castenholzii DSM 13941 5537849 YP_001430538.1 CDS Rcas_0388 NC_009767.1 487926 488642 D KEGG: rrs:RoseRS_0144 amidase related to nicotinamidase-like protein; nicotinamidase-like amidase 487926..488642 Roseiflexus castenholzii DSM 13941 5537850 YP_001430539.1 CDS Rcas_0389 NC_009767.1 488849 491128 D PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_0142 UvrD/REP helicase; UvrD/REP helicase 488849..491128 Roseiflexus castenholzii DSM 13941 5537851 YP_001430540.1 CDS Rcas_0390 NC_009767.1 491134 492711 R KEGG: rrs:RoseRS_0141 transcriptional regulator, CdaR; transcriptional regulator CdaR complement(491134..492711) Roseiflexus castenholzii DSM 13941 5537852 YP_001430541.1 CDS Rcas_0391 NC_009767.1 492779 494146 R KEGG: rrs:RoseRS_0140 glucose/sorbosone dehydrogenase-like protein; glucose/sorbosone dehydrogenase-like protein complement(492779..494146) Roseiflexus castenholzii DSM 13941 5537853 YP_001430542.1 CDS Rcas_0392 NC_009767.1 494483 495436 D PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_0139 polyprenyl synthetase; polyprenyl synthetase 494483..495436 Roseiflexus castenholzii DSM 13941 5537854 YP_001430543.1 CDS Rcas_0393 NC_009767.1 495459 497666 D PFAM: alpha amylase catalytic region; KEGG: rrs:RoseRS_0138 alpha amylase, catalytic region; alpha amylase 495459..497666 Roseiflexus castenholzii DSM 13941 5537855 YP_001430544.1 CDS Rcas_0394 NC_009767.1 498303 499589 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0137 amine oxidase; amine oxidase complement(498303..499589) Roseiflexus castenholzii DSM 13941 5537856 YP_001430545.1 CDS Rcas_0395 NC_009767.1 499809 500567 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_0136 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 499809..500567 Roseiflexus castenholzii DSM 13941 5537857 YP_001430546.1 CDS Rcas_0396 NC_009767.1 500682 501353 D KEGG: rrs:RoseRS_3546 hypothetical protein; hypothetical protein 500682..501353 Roseiflexus castenholzii DSM 13941 5537858 YP_001430547.1 CDS Rcas_0397 NC_009767.1 501587 504673 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: aeh:Mlg_1539 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 501587..504673 Roseiflexus castenholzii DSM 13941 5537859 YP_001430548.1 CDS Rcas_0398 NC_009767.1 504663 505061 D KEGG: rrs:RoseRS_2918 hypothetical protein; hypothetical protein 504663..505061 Roseiflexus castenholzii DSM 13941 5537860 YP_001430549.1 CDS Rcas_0399 NC_009767.1 505058 508372 D PFAM: type III restriction protein res subunit; KEGG: mem:Memar_1479 type III restriction enzyme, res subunit; type III restriction protein res subunit 505058..508372 Roseiflexus castenholzii DSM 13941 5537861 YP_001430550.1 CDS Rcas_0400 NC_009767.1 508895 509221 D hypothetical protein 508895..509221 Roseiflexus castenholzii DSM 13941 5537862 YP_001430551.1 CDS Rcas_0401 NC_009767.1 509396 509869 D KEGG: mxa:MXAN_4269 hypothetical protein; hypothetical protein 509396..509869 Roseiflexus castenholzii DSM 13941 5537863 YP_001430552.1 CDS Rcas_0402 NC_009767.1 509931 510737 D KEGG: gur:Gura_2746 hypothetical protein; hypothetical protein 509931..510737 Roseiflexus castenholzii DSM 13941 5537864 YP_001430553.1 CDS Rcas_0403 NC_009767.1 510746 511357 D hypothetical protein 510746..511357 Roseiflexus castenholzii DSM 13941 5537865 YP_001430554.1 CDS Rcas_0404 NC_009767.1 511389 512036 D hypothetical protein 511389..512036 Roseiflexus castenholzii DSM 13941 5537866 YP_001430555.1 CDS Rcas_0405 NC_009767.1 512030 513181 R PFAM: transposase IS4 family protein; KEGG: rrs:RoseRS_0444 transposase, IS4 family protein; transposase IS4 family protein complement(512030..513181) Roseiflexus castenholzii DSM 13941 5537867 YP_001430556.1 CDS Rcas_0406 NC_009767.1 514076 514546 D hypothetical protein 514076..514546 Roseiflexus castenholzii DSM 13941 5537868 YP_001430557.1 CDS Rcas_0407 NC_009767.1 514608 516038 D KEGG: ana:all3632 site-specific DNA-methyltransferase (cytosine-specific); cytosine-specific DNA-methyltransferase 514608..516038 Roseiflexus castenholzii DSM 13941 5537869 YP_001430558.1 CDS Rcas_0408 NC_009767.1 516038 517000 D KEGG: ana:all3631 type II site-specific deoxyribonuclease; type II site-specific deoxyribonuclease 516038..517000 Roseiflexus castenholzii DSM 13941 5537870 YP_001430559.1 CDS Rcas_0409 NC_009767.1 517804 518055 D KEGG: cph:Cpha266_0647 hypothetical protein; hypothetical protein 517804..518055 Roseiflexus castenholzii DSM 13941 5537871 YP_001430560.1 CDS Rcas_0411 NC_009767.1 518610 519761 R PFAM: transposase IS4 family protein; KEGG: rrs:RoseRS_0444 transposase, IS4 family protein; transposase IS4 family protein complement(518610..519761) Roseiflexus castenholzii DSM 13941 5537873 YP_001430561.1 CDS Rcas_0412 NC_009767.1 520218 522149 D KEGG: mem:Memar_1479 type III restriction enzyme, res subunit; hypothetical protein 520218..522149 Roseiflexus castenholzii DSM 13941 5537874 YP_001430562.1 CDS Rcas_0413 NC_009767.1 522170 522943 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4611 alpha/beta hydrolase fold; alpha/beta hydrolase complement(522170..522943) Roseiflexus castenholzii DSM 13941 5537875 YP_001430563.1 CDS Rcas_0414 NC_009767.1 522970 524505 R PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4612 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase complement(522970..524505) Roseiflexus castenholzii DSM 13941 5537876 YP_001430564.1 CDS Rcas_0415 NC_009767.1 525416 526963 R PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4613 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase complement(525416..526963) Roseiflexus castenholzii DSM 13941 5537877 YP_001430565.1 CDS Rcas_0416 NC_009767.1 527581 529617 R TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: rrs:RoseRS_4614 transketolase; transketolase complement(527581..529617) Roseiflexus castenholzii DSM 13941 5537878 YP_001430566.1 CDS Rcas_0417 NC_009767.1 529647 530300 R KEGG: rrs:RoseRS_4615 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase complement(529647..530300) Roseiflexus castenholzii DSM 13941 5537879 YP_001430567.1 CDS Rcas_0418 NC_009767.1 530441 531658 D TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_4616 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 530441..531658 Roseiflexus castenholzii DSM 13941 5537880 YP_001430568.1 CDS Rcas_0419 NC_009767.1 531724 532668 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4617 ABC transporter related; ABC transporter-like protein 531724..532668 Roseiflexus castenholzii DSM 13941 5537881 YP_001430569.1 CDS Rcas_0420 NC_009767.1 532661 533449 D KEGG: rrs:RoseRS_4618 ABC-2 type transporter; ABC-2 type transporter 532661..533449 Roseiflexus castenholzii DSM 13941 5537882 YP_001430570.1 CDS Rcas_0421 NC_009767.1 533524 534261 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4619 two component transcriptional regulator, winged helix family; two component transcriptional regulator 533524..534261 Roseiflexus castenholzii DSM 13941 5537883 YP_001430571.1 CDS Rcas_0422 NC_009767.1 534421 535755 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_4620 response regulator receiver protein; response regulator receiver protein complement(534421..535755) Roseiflexus castenholzii DSM 13941 5537884 YP_001430572.1 CDS Rcas_0423 NC_009767.1 535938 538412 D SMART: Integrin alpha beta-propellor repeat protein; KEGG: rrs:RoseRS_4621 integrin alpha beta-propellor repeat protein; alpha beta-propellor repeat-containing integrin 535938..538412 Roseiflexus castenholzii DSM 13941 5537885 YP_001430573.1 CDS Rcas_0424 NC_009767.1 538405 539427 R KEGG: rrs:RoseRS_4622 AAA ATPase; ATPase AAA complement(538405..539427) Roseiflexus castenholzii DSM 13941 5537886 YP_001430574.1 CDS Rcas_0425 NC_009767.1 539702 540247 R PFAM: Appr-1-p processing domain protein; KEGG: rrs:RoseRS_4194 Appr-1-p processing domain protein; appr-1-p processing domain-containing protein complement(539702..540247) Roseiflexus castenholzii DSM 13941 5537887 YP_001430575.1 CDS Rcas_0426 NC_009767.1 540244 540555 R hypothetical protein complement(540244..540555) Roseiflexus castenholzii DSM 13941 5537888 YP_001430576.1 CDS Rcas_0427 NC_009767.1 540710 541504 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3838 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(540710..541504) Roseiflexus castenholzii DSM 13941 5537890 YP_001430577.1 CDS Rcas_0428 NC_009767.1 541977 542693 R KEGG: rrs:RoseRS_4195 hypothetical protein; hypothetical protein complement(541977..542693) Roseiflexus castenholzii DSM 13941 5537891 YP_001430578.1 CDS Rcas_0429 NC_009767.1 542870 543397 R hypothetical protein complement(542870..543397) Roseiflexus castenholzii DSM 13941 5537892 YP_001430579.1 CDS Rcas_0430 NC_009767.1 543986 544633 D KEGG: rrs:RoseRS_4198 hypothetical protein; hypothetical protein 543986..544633 Roseiflexus castenholzii DSM 13941 5537893 YP_001430580.1 CDS Rcas_0431 NC_009767.1 545213 545821 R KEGG: rrs:RoseRS_4200 sensor protein; sensor protein complement(545213..545821) Roseiflexus castenholzii DSM 13941 5537894 YP_001430581.1 CDS dcd NC_009767.1 546294 546848 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 546294..546848 Roseiflexus castenholzii DSM 13941 5537895 YP_001430582.1 CDS Rcas_0433 NC_009767.1 546966 547388 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_4202 NUDIX hydrolase; NUDIX hydrolase complement(546966..547388) Roseiflexus castenholzii DSM 13941 5537896 YP_001430583.1 CDS Rcas_0434 NC_009767.1 547418 548335 R PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: rrs:RoseRS_4203 cytochrome c biogenesis protein, transmembrane region; cytochrome c biogenesis protein transmembrane region complement(547418..548335) Roseiflexus castenholzii DSM 13941 5537897 YP_001430584.1 CDS Rcas_0435 NC_009767.1 548348 549391 R PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_4204 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(548348..549391) Roseiflexus castenholzii DSM 13941 5537898 YP_001430585.1 CDS Rcas_0436 NC_009767.1 549655 550269 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4205 protein of unknown function DUF820; hypothetical protein 549655..550269 Roseiflexus castenholzii DSM 13941 5537899 YP_001430586.1 CDS Rcas_0437 NC_009767.1 550282 551229 D KEGG: rrs:RoseRS_4206 hypothetical protein; hypothetical protein 550282..551229 Roseiflexus castenholzii DSM 13941 5537900 YP_001430587.1 CDS Rcas_0438 NC_009767.1 551934 552701 R PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rrs:RoseRS_4207 peptidase C26; peptidase C26 complement(551934..552701) Roseiflexus castenholzii DSM 13941 5537901 YP_001430588.1 CDS Rcas_0439 NC_009767.1 553088 554110 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_4208 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 553088..554110 Roseiflexus castenholzii DSM 13941 5537902 YP_001430589.1 CDS Rcas_0440 NC_009767.1 554103 556220 D KEGG: rrs:RoseRS_4209 hypothetical protein; hypothetical protein 554103..556220 Roseiflexus castenholzii DSM 13941 5537903 YP_001430590.1 CDS Rcas_0441 NC_009767.1 556164 556598 R PFAM: protein of unknown function DUF1486; KEGG: rrs:RoseRS_4210 protein of unknown function DUF1486; hypothetical protein complement(556164..556598) Roseiflexus castenholzii DSM 13941 5537904 YP_001430591.1 CDS Rcas_0442 NC_009767.1 557333 559621 D KEGG: rrs:RoseRS_4212 hypothetical protein; hypothetical protein 557333..559621 Roseiflexus castenholzii DSM 13941 5537905 YP_001430592.1 CDS Rcas_0443 NC_009767.1 559625 560470 R KEGG: rrs:RoseRS_4213 membrane protein TerC possibly involved in tellurium resistance-like protein; tellurium resistance protein TerC complement(559625..560470) Roseiflexus castenholzii DSM 13941 5537906 YP_001430593.1 CDS Rcas_0444 NC_009767.1 560815 562107 D PFAM: adenylosuccinate synthetase; KEGG: rrs:RoseRS_4214 adenylosuccinate synthase; adenylosuccinate synthetase 560815..562107 Roseiflexus castenholzii DSM 13941 5537907 YP_001430594.1 CDS Rcas_0445 NC_009767.1 562112 562402 R KEGG: rrs:RoseRS_4215 hypothetical protein; hypothetical protein complement(562112..562402) Roseiflexus castenholzii DSM 13941 5537908 YP_001430595.1 CDS Rcas_0446 NC_009767.1 562601 563551 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_4216 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase complement(562601..563551) Roseiflexus castenholzii DSM 13941 5537909 YP_001430596.1 CDS Rcas_0447 NC_009767.1 563778 564821 D PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_4217 GHMP kinase; GHMP kinase 563778..564821 Roseiflexus castenholzii DSM 13941 5537910 YP_001430597.1 CDS Rcas_0448 NC_009767.1 564908 565531 D TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_4218 histidinol-phosphate phosphatase family protein; histidinol-phosphate phosphatase family protein 564908..565531 Roseiflexus castenholzii DSM 13941 5537911 YP_001430598.1 CDS Rcas_0449 NC_009767.1 565550 567685 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4219 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 565550..567685 Roseiflexus castenholzii DSM 13941 5537912 YP_001430599.1 CDS Rcas_0450 NC_009767.1 567682 568404 D PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4220 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 567682..568404 Roseiflexus castenholzii DSM 13941 5537913 YP_001430600.1 CDS Rcas_0451 NC_009767.1 569442 570686 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4222 glycosyl transferase, family 2; glycosyl transferase family protein 569442..570686 Roseiflexus castenholzii DSM 13941 5537914 YP_001430601.1 CDS Rcas_0452 NC_009767.1 570937 572958 D KEGG: rrs:RoseRS_4223 hypothetical protein; hypothetical protein 570937..572958 Roseiflexus castenholzii DSM 13941 5537915 YP_001430602.1 CDS Rcas_0453 NC_009767.1 573769 576255 D KEGG: rrs:RoseRS_4224 hypothetical protein; hypothetical protein 573769..576255 Roseiflexus castenholzii DSM 13941 5537916 YP_001430603.1 CDS Rcas_0454 NC_009767.1 576688 578418 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_4225 radical SAM domain protein; radical SAM domain-containing protein 576688..578418 Roseiflexus castenholzii DSM 13941 5537917 YP_001430604.1 CDS Rcas_0455 NC_009767.1 579059 580228 D KEGG: rrs:RoseRS_4226 membrane protein-like protein; hypothetical protein 579059..580228 Roseiflexus castenholzii DSM 13941 5537918 YP_001430605.1 CDS Rcas_0456 NC_009767.1 580486 581670 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4227 glycosyl transferase, group 1; group 1 glycosyl transferase 580486..581670 Roseiflexus castenholzii DSM 13941 5537919 YP_001430606.1 CDS Rcas_0457 NC_009767.1 581844 583310 D PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_4228 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 581844..583310 Roseiflexus castenholzii DSM 13941 5537920 YP_001430607.1 CDS Rcas_0458 NC_009767.1 583327 584670 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4229 glycosyl transferase, group 1; group 1 glycosyl transferase 583327..584670 Roseiflexus castenholzii DSM 13941 5537921 YP_001430608.1 CDS Rcas_0459 NC_009767.1 584972 585883 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4230 glycosyl transferase, family 2; glycosyl transferase family protein 584972..585883 Roseiflexus castenholzii DSM 13941 5537922 YP_001430609.1 CDS Rcas_0460 NC_009767.1 586443 587984 D KEGG: rrs:RoseRS_4231 hypothetical protein; hypothetical protein 586443..587984 Roseiflexus castenholzii DSM 13941 5537923 YP_001430610.1 CDS Rcas_0461 NC_009767.1 588475 589647 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4232 glycosyl transferase, group 1; group 1 glycosyl transferase 588475..589647 Roseiflexus castenholzii DSM 13941 5537924 YP_001430611.1 CDS Rcas_0462 NC_009767.1 589658 590884 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4233 glycosyl transferase, group 1; group 1 glycosyl transferase 589658..590884 Roseiflexus castenholzii DSM 13941 5537925 YP_001430612.1 CDS Rcas_0463 NC_009767.1 590886 591767 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4607 glycosyl transferase, family 2; glycosyl transferase family protein 590886..591767 Roseiflexus castenholzii DSM 13941 5537926 YP_001430613.1 CDS Rcas_0464 NC_009767.1 591780 592964 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2150 glycosyl transferase, group 1; group 1 glycosyl transferase 591780..592964 Roseiflexus castenholzii DSM 13941 5537927 YP_001430614.1 CDS Rcas_0465 NC_009767.1 592971 594431 D PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4235 O-antigen polymerase; O-antigen polymerase 592971..594431 Roseiflexus castenholzii DSM 13941 5537928 YP_001430615.1 CDS Rcas_0466 NC_009767.1 594428 596032 D PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: rrs:RoseRS_4236 glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase 594428..596032 Roseiflexus castenholzii DSM 13941 5537929 YP_001430616.1 CDS Rcas_0467 NC_009767.1 598346 600010 D KEGG: rrs:RoseRS_4239 hypothetical protein; hypothetical protein 598346..600010 Roseiflexus castenholzii DSM 13941 5537930 YP_001430617.1 CDS Rcas_0468 NC_009767.1 600017 601567 D KEGG: rrs:RoseRS_4240 hypothetical protein; hypothetical protein 600017..601567 Roseiflexus castenholzii DSM 13941 5537931 YP_001430618.1 CDS Rcas_0469 NC_009767.1 601840 603414 D KEGG: rrs:RoseRS_4241 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase 601840..603414 Roseiflexus castenholzii DSM 13941 5537932 YP_001430619.1 CDS Rcas_0470 NC_009767.1 606795 607679 D KEGG: rrs:RoseRS_4242 hypothetical protein; hypothetical protein 606795..607679 Roseiflexus castenholzii DSM 13941 5537933 YP_001430620.1 CDS Rcas_0471 NC_009767.1 608494 611673 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rrs:RoseRS_4244 conserved repeat domain; hypothetical protein 608494..611673 Roseiflexus castenholzii DSM 13941 5537934 YP_001430621.1 CDS Rcas_0472 NC_009767.1 611753 612223 R PFAM: transcription activator effector binding; KEGG: rrs:RoseRS_4366 transcription activator, effector binding; transcription activator effector binding complement(611753..612223) Roseiflexus castenholzii DSM 13941 5537935 YP_001430622.1 CDS Rcas_0474 NC_009767.1 613696 614790 D PFAM: restriction endonuclease; SH3 type 3 domain protein; KEGG: rrs:RoseRS_4245 restriction endonuclease; restriction endonuclease 613696..614790 Roseiflexus castenholzii DSM 13941 5537937 YP_001430623.1 CDS Rcas_0475 NC_009767.1 614898 615725 D hypothetical protein 614898..615725 Roseiflexus castenholzii DSM 13941 5537938 YP_001430624.1 CDS Rcas_0476 NC_009767.1 615895 617133 R KEGG: rrs:RoseRS_4246 hypothetical protein; hypothetical protein complement(615895..617133) Roseiflexus castenholzii DSM 13941 5537939 YP_001430625.1 CDS Rcas_0477 NC_009767.1 617325 618542 D PFAM: ROK family protein; regulatory protein MarR; regulatory protein Crp; KEGG: rrs:RoseRS_4247 ROK family protein; ROK family protein 617325..618542 Roseiflexus castenholzii DSM 13941 5537940 YP_001430626.1 CDS Rcas_0478 NC_009767.1 618610 619989 D PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4248 extracellular solute-binding protein, family 1; extracellular solute-binding protein 618610..619989 Roseiflexus castenholzii DSM 13941 5537941 YP_001430627.1 CDS Rcas_0479 NC_009767.1 620252 621196 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4249 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 620252..621196 Roseiflexus castenholzii DSM 13941 5537942 YP_001430628.1 CDS Rcas_0480 NC_009767.1 621211 622071 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4250 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 621211..622071 Roseiflexus castenholzii DSM 13941 5537943 YP_001430629.1 CDS Rcas_0481 NC_009767.1 622085 622822 D KEGG: rrs:RoseRS_4251 hypothetical protein; hypothetical protein 622085..622822 Roseiflexus castenholzii DSM 13941 5537944 YP_001430630.1 CDS Rcas_0482 NC_009767.1 622828 623520 D KEGG: rrs:RoseRS_4252 hypothetical protein; hypothetical protein 622828..623520 Roseiflexus castenholzii DSM 13941 5537945 YP_001430631.1 CDS Rcas_0483 NC_009767.1 623501 624283 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4253 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 623501..624283 Roseiflexus castenholzii DSM 13941 5537946 YP_001430632.1 CDS Rcas_0484 NC_009767.1 624289 626235 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3654 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD complement(624289..626235) Roseiflexus castenholzii DSM 13941 5537947 YP_001430633.1 CDS Rcas_0485 NC_009767.1 626250 626927 R PFAM: protein of unknown function DUF218; KEGG: rrs:RoseRS_3653 protein of unknown function DUF218; hypothetical protein complement(626250..626927) Roseiflexus castenholzii DSM 13941 5537948 YP_001430634.1 CDS Rcas_0486 NC_009767.1 626924 628135 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_3652 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(626924..628135) Roseiflexus castenholzii DSM 13941 5537949 YP_001430635.1 CDS Rcas_0487 NC_009767.1 628222 629310 R KEGG: rrs:RoseRS_3651 hypothetical protein; hypothetical protein complement(628222..629310) Roseiflexus castenholzii DSM 13941 5537950 YP_001430636.1 CDS nadE NC_009767.1 629322 630350 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(629322..630350) Roseiflexus castenholzii DSM 13941 5537951 YP_001430637.1 CDS Rcas_0489 NC_009767.1 630340 632340 R TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: rrs:RoseRS_3649 asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(630340..632340) Roseiflexus castenholzii DSM 13941 5537952 YP_001430638.1 CDS Rcas_0490 NC_009767.1 632425 633963 R PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_3648 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase complement(632425..633963) Roseiflexus castenholzii DSM 13941 5537953 YP_001430639.1 CDS Rcas_0491 NC_009767.1 633950 634273 R KEGG: rrs:RoseRS_3647 hypothetical protein; hypothetical protein complement(633950..634273) Roseiflexus castenholzii DSM 13941 5537954 YP_001430640.1 CDS Rcas_0492 NC_009767.1 634300 634965 R PFAM: LmbE family protein; KEGG: rrs:RoseRS_3646 LmbE family protein; LmbE family protein complement(634300..634965) Roseiflexus castenholzii DSM 13941 5537955 YP_001430641.1 CDS Rcas_0493 NC_009767.1 634985 635848 R KEGG: rrs:RoseRS_3645 hypothetical protein; hypothetical protein complement(634985..635848) Roseiflexus castenholzii DSM 13941 5537956 YP_001430642.1 CDS Rcas_0494 NC_009767.1 635852 636511 R PFAM: sugar transferase; KEGG: rrs:RoseRS_3644 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase complement(635852..636511) Roseiflexus castenholzii DSM 13941 5537957 YP_001430643.1 CDS Rcas_0495 NC_009767.1 636529 637692 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3643 glycosyl transferase, group 1; group 1 glycosyl transferase complement(636529..637692) Roseiflexus castenholzii DSM 13941 5537958 YP_001430644.1 CDS Rcas_0496 NC_009767.1 637727 638956 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3642 glycosyl transferase, group 1; group 1 glycosyl transferase complement(637727..638956) Roseiflexus castenholzii DSM 13941 5537959 YP_001430645.1 CDS Rcas_0497 NC_009767.1 638972 640489 R KEGG: rrs:RoseRS_3641 hypothetical protein; hypothetical protein complement(638972..640489) Roseiflexus castenholzii DSM 13941 5537960 YP_001430646.1 CDS Rcas_0498 NC_009767.1 640486 641835 R PFAM: polysaccharide biosynthesis protein; KEGG: rrs:RoseRS_3640 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(640486..641835) Roseiflexus castenholzii DSM 13941 5537961 YP_001430647.1 CDS Rcas_0499 NC_009767.1 641862 644516 R KEGG: rrs:RoseRS_3639 hypothetical protein; hypothetical protein complement(641862..644516) Roseiflexus castenholzii DSM 13941 5537962 YP_001430648.1 CDS Rcas_0500 NC_009767.1 644544 646052 R PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_3638 secretion protein HlyD family protein; secretion protein HlyD family protein complement(644544..646052) Roseiflexus castenholzii DSM 13941 5537963 YP_001430649.1 CDS Rcas_0501 NC_009767.1 646129 647595 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_3637 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(646129..647595) Roseiflexus castenholzii DSM 13941 5537964 YP_001430650.1 CDS Rcas_0502 NC_009767.1 648416 650203 D KEGG: rrs:RoseRS_3636 hypothetical protein; hypothetical protein 648416..650203 Roseiflexus castenholzii DSM 13941 5537965 YP_001430651.1 CDS Rcas_0503 NC_009767.1 650200 651270 D KEGG: rrs:RoseRS_3635 hypothetical protein; hypothetical protein 650200..651270 Roseiflexus castenholzii DSM 13941 5537966 YP_001430652.1 CDS Rcas_0504 NC_009767.1 652886 653284 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_3632 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(652886..653284) Roseiflexus castenholzii DSM 13941 5537967 YP_001430653.1 CDS Rcas_0505 NC_009767.1 653563 654660 D PFAM: Di-haem cytochrome c peroxidase; KEGG: rrs:RoseRS_3631 cytochrome-c peroxidase; cytochrome-c peroxidase 653563..654660 Roseiflexus castenholzii DSM 13941 5537968 YP_001430654.1 CDS Rcas_0506 NC_009767.1 654680 657505 D KEGG: rrs:RoseRS_3630 hypothetical protein; hypothetical protein 654680..657505 Roseiflexus castenholzii DSM 13941 5537969 YP_001430655.1 CDS Rcas_0507 NC_009767.1 658348 658965 D KEGG: rrs:RoseRS_3628 hypothetical protein; hypothetical protein 658348..658965 Roseiflexus castenholzii DSM 13941 5537970 YP_001430656.1 CDS Rcas_0508 NC_009767.1 659120 661903 R PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_3627 glycosyl transferase, family 51; peptidoglycan glycosyltransferase complement(659120..661903) Roseiflexus castenholzii DSM 13941 5537971 YP_001430657.1 CDS Rcas_0509 NC_009767.1 661981 663885 D KEGG: rrs:RoseRS_3626 hypothetical protein; hypothetical protein 661981..663885 Roseiflexus castenholzii DSM 13941 5537972 YP_001430658.1 CDS Rcas_0510 NC_009767.1 663896 665881 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3625 protein kinase; serine/threonine protein kinase 663896..665881 Roseiflexus castenholzii DSM 13941 5537973 YP_001430659.1 CDS Rcas_0511 NC_009767.1 666031 666345 D PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3624 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 666031..666345 Roseiflexus castenholzii DSM 13941 5537974 YP_001430660.1 CDS Rcas_0512 NC_009767.1 666495 667505 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_3623 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 666495..667505 Roseiflexus castenholzii DSM 13941 5537975 YP_001430661.1 CDS Rcas_0513 NC_009767.1 667640 668908 D PFAM: Pyrrolo-quinoline quinone; KEGG: rrs:RoseRS_3622 pyrrolo-quinoline quinone; Pyrrolo-quinoline quinone 667640..668908 Roseiflexus castenholzii DSM 13941 5537976 YP_001430662.1 CDS Rcas_0514 NC_009767.1 668973 669980 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3621 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 668973..669980 Roseiflexus castenholzii DSM 13941 5537977 YP_001430663.1 CDS Rcas_0515 NC_009767.1 670020 670928 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3620 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 670020..670928 Roseiflexus castenholzii DSM 13941 5537978 YP_001430664.1 CDS Rcas_0516 NC_009767.1 671225 672691 D PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3619 extracellular solute-binding protein, family 1; extracellular solute-binding protein 671225..672691 Roseiflexus castenholzii DSM 13941 5537979 YP_001430665.1 CDS Rcas_0517 NC_009767.1 672823 675333 D PFAM: Spermine synthase; KEGG: rrs:RoseRS_3618 spermine synthase; spermine synthase 672823..675333 Roseiflexus castenholzii DSM 13941 5537980 YP_001430666.1 CDS Rcas_0518 NC_009767.1 675367 676407 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_3617 oxidoreductase domain protein; oxidoreductase domain-containing protein 675367..676407 Roseiflexus castenholzii DSM 13941 5537981 YP_001430667.1 CDS Rcas_0519 NC_009767.1 676418 678277 D PFAM: glycoside hydrolase family 20; KEGG: rrs:RoseRS_3616 glycoside hydrolase, family 20; glycoside hydrolase family protein 676418..678277 Roseiflexus castenholzii DSM 13941 5537982 YP_001430668.1 CDS Rcas_0520 NC_009767.1 678274 679524 D PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_3615 oxidoreductase domain protein; oxidoreductase domain-containing protein 678274..679524 Roseiflexus castenholzii DSM 13941 5537983 YP_001430669.1 CDS Rcas_0521 NC_009767.1 679575 680936 D PFAM: glycoside hydrolase family 1; KEGG: rrs:RoseRS_3614 beta-glucosidase; beta-glucosidase 679575..680936 Roseiflexus castenholzii DSM 13941 5537984 YP_001430670.1 CDS Rcas_0522 NC_009767.1 681744 683438 R PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: rrs:RoseRS_0219 formate--tetrahydrofolate ligase; formate--tetrahydrofolate ligase complement(681744..683438) Roseiflexus castenholzii DSM 13941 5537985 YP_001430671.1 CDS Rcas_0523 NC_009767.1 683553 684287 R KEGG: rrs:RoseRS_0218 hypothetical protein; hypothetical protein complement(683553..684287) Roseiflexus castenholzii DSM 13941 5537986 YP_001430672.1 CDS Rcas_0524 NC_009767.1 684595 685563 R PFAM: esterase; KEGG: rrs:RoseRS_0667 esterase; esterase complement(684595..685563) Roseiflexus castenholzii DSM 13941 5537987 YP_001430673.1 CDS Rcas_0525 NC_009767.1 685593 688235 R PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0666 protein kinase; TPR repeat-containing serine/threonine protein kinase complement(685593..688235) Roseiflexus castenholzii DSM 13941 5537988 YP_001430674.1 CDS Rcas_0526 NC_009767.1 688479 689633 D PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_0665 hypothetical protein; major facilitator transporter 688479..689633 Roseiflexus castenholzii DSM 13941 5537989 YP_001430675.1 CDS Rcas_0527 NC_009767.1 689669 691735 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_0664 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(689669..691735) Roseiflexus castenholzii DSM 13941 5537990 YP_001430676.1 CDS Rcas_0528 NC_009767.1 691874 692809 D PFAM: LmbE family protein; KEGG: rrs:RoseRS_0663 LmbE family protein; LmbE family protein 691874..692809 Roseiflexus castenholzii DSM 13941 5537991 YP_001430677.1 CDS Rcas_0529 NC_009767.1 692995 693528 D KEGG: rrs:RoseRS_0662 hypothetical protein; hypothetical protein 692995..693528 Roseiflexus castenholzii DSM 13941 5537992 YP_001430678.1 CDS Rcas_0530 NC_009767.1 693782 695659 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0661 ABC transporter related; ABC transporter-like protein 693782..695659 Roseiflexus castenholzii DSM 13941 5537993 YP_001430679.1 CDS Rcas_0531 NC_009767.1 695660 698479 R KEGG: rrs:RoseRS_0660 uncharacterized membrane protein-like protein; hypothetical protein complement(695660..698479) Roseiflexus castenholzii DSM 13941 5537994 YP_001430680.1 CDS Rcas_0532 NC_009767.1 699419 707458 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0659 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(699419..707458) Roseiflexus castenholzii DSM 13941 5537995 YP_001430681.1 CDS Rcas_0533 NC_009767.1 708954 710219 R KEGG: rrs:RoseRS_0658 hypothetical protein; hypothetical protein complement(708954..710219) Roseiflexus castenholzii DSM 13941 5537996 YP_001430682.1 CDS Rcas_0534 NC_009767.1 711743 713056 R PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: rrs:RoseRS_0657 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(711743..713056) Roseiflexus castenholzii DSM 13941 5537997 YP_001430683.1 CDS Rcas_0535 NC_009767.1 714142 714810 D KEGG: rsq:Rsph17025_3864 ABC transporter related; hypothetical protein 714142..714810 Roseiflexus castenholzii DSM 13941 5537998 YP_001430684.1 CDS Rcas_0536 NC_009767.1 715209 715478 D hypothetical protein 715209..715478 Roseiflexus castenholzii DSM 13941 5537999 YP_001430685.1 CDS Rcas_0537 NC_009767.1 715632 715979 R KEGG: rpa:RPA2819 hypothetical protein; hypothetical protein complement(715632..715979) Roseiflexus castenholzii DSM 13941 5538000 YP_001430686.1 CDS Rcas_0538 NC_009767.1 715980 716225 R PFAM: protein of unknown function DUF433; KEGG: rrs:RoseRS_0896 protein of unknown function DUF433; hypothetical protein complement(715980..716225) Roseiflexus castenholzii DSM 13941 5538001 YP_001430687.1 CDS Rcas_0539 NC_009767.1 717034 717246 R hypothetical protein complement(717034..717246) Roseiflexus castenholzii DSM 13941 5538002 YP_001430688.1 CDS Rcas_0540 NC_009767.1 718772 719992 R KEGG: rrs:RoseRS_0628 coenzyme F390 synthetase-like protein; coenzyme F390 synthetase-like protein complement(718772..719992) Roseiflexus castenholzii DSM 13941 5538003 YP_001430689.1 CDS Rcas_0541 NC_009767.1 720008 720808 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0627 ABC transporter related; ABC transporter-like protein complement(720008..720808) Roseiflexus castenholzii DSM 13941 5538004 YP_001430690.1 CDS Rcas_0542 NC_009767.1 721034 722296 R KEGG: rrs:RoseRS_0626 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; branched chain amino acid ABC transporter substrate-binding protein complement(721034..722296) Roseiflexus castenholzii DSM 13941 5538005 YP_001430691.1 CDS Rcas_0543 NC_009767.1 722278 723336 R PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0625 inner-membrane translocator; inner-membrane translocator complement(722278..723336) Roseiflexus castenholzii DSM 13941 5538006 YP_001430692.1 CDS Rcas_0544 NC_009767.1 723354 724235 R PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_0624 inner-membrane translocator; inner-membrane translocator complement(723354..724235) Roseiflexus castenholzii DSM 13941 5538007 YP_001430693.1 CDS Rcas_0545 NC_009767.1 724327 726276 R PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0623 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase complement(724327..726276) Roseiflexus castenholzii DSM 13941 5538008 YP_001430694.1 CDS Rcas_0546 NC_009767.1 726279 727091 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0622 ABC transporter related; ABC transporter-like protein complement(726279..727091) Roseiflexus castenholzii DSM 13941 5538009 YP_001430695.1 CDS Rcas_0547 NC_009767.1 727273 728598 R PFAM: peptidase M24; KEGG: rrs:RoseRS_0616 peptidase M24; peptidase M24 complement(727273..728598) Roseiflexus castenholzii DSM 13941 5538010 YP_001430696.1 CDS Rcas_0548 NC_009767.1 728680 729360 R KEGG: rrs:RoseRS_0615 hypothetical protein; hypothetical protein complement(728680..729360) Roseiflexus castenholzii DSM 13941 5538011 YP_001430697.1 CDS Rcas_0549 NC_009767.1 729492 730361 R KEGG: rrs:RoseRS_0614 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; apurinic endonuclease Apn1 complement(729492..730361) Roseiflexus castenholzii DSM 13941 5538012 YP_001430698.1 CDS Rcas_0550 NC_009767.1 730693 731811 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0350 anti-sigma-factor antagonist; anti-sigma-factor antagonist 730693..731811 Roseiflexus castenholzii DSM 13941 5538013 YP_001430699.1 CDS Rcas_0551 NC_009767.1 731981 733348 D PFAM: phosphoribosylglycinamide synthetase; KEGG: rrs:RoseRS_0351 phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 731981..733348 Roseiflexus castenholzii DSM 13941 5538014 YP_001430700.1 CDS Rcas_0552 NC_009767.1 733329 734648 D TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; methyltransferase small; (Uracil-5)-methyltransferase; KEGG: rrs:RoseRS_0352 RNA methyltransferase, TrmA family; RNA methyltransferase 733329..734648 Roseiflexus castenholzii DSM 13941 5538015 YP_001430701.1 CDS Rcas_0553 NC_009767.1 734829 735470 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1413 protein of unknown function DUF820; hypothetical protein 734829..735470 Roseiflexus castenholzii DSM 13941 5538016 YP_001430702.1 CDS Rcas_0554 NC_009767.1 735511 736560 R PFAM: alanine racemase domain protein; KEGG: rrs:RoseRS_3864 alanine racemase domain protein; alanine racemase complement(735511..736560) Roseiflexus castenholzii DSM 13941 5538017 YP_001430703.1 CDS Rcas_0555 NC_009767.1 737240 742033 D PFAM: Laminin G sub domain 2; SMART: LamG domain protein jellyroll fold domain protein; KEGG: rrs:RoseRS_3863 laminin G, sub domain 2; laminin G 737240..742033 Roseiflexus castenholzii DSM 13941 5538018 YP_001430704.1 CDS Rcas_0556 NC_009767.1 742405 743223 R TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: rrs:RoseRS_3862 hemolysin A; hemolysin A complement(742405..743223) Roseiflexus castenholzii DSM 13941 5538019 YP_001430705.1 CDS Rcas_0557 NC_009767.1 743223 743711 R KEGG: rrs:RoseRS_3861 hypothetical protein; hypothetical protein complement(743223..743711) Roseiflexus castenholzii DSM 13941 5538020 YP_001430706.1 CDS Rcas_0558 NC_009767.1 743735 744925 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_3860 formyl-CoA transferase; formyl-CoA transferase complement(743735..744925) Roseiflexus castenholzii DSM 13941 5538021 YP_001430707.1 CDS Rcas_0559 NC_009767.1 745047 746570 D PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_3859 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 745047..746570 Roseiflexus castenholzii DSM 13941 5538022 YP_001430708.1 CDS Rcas_0560 NC_009767.1 746583 749513 D PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3858 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 746583..749513 Roseiflexus castenholzii DSM 13941 5538023 YP_001430709.1 CDS Rcas_0561 NC_009767.1 749871 751715 D KEGG: rrs:RoseRS_3857 amino acid permease-associated region; amino acid permease 749871..751715 Roseiflexus castenholzii DSM 13941 5538024 YP_001430710.1 CDS Rcas_0562 NC_009767.1 751900 752532 R KEGG: rrs:RoseRS_4196 hypothetical protein; hypothetical protein complement(751900..752532) Roseiflexus castenholzii DSM 13941 5538025 YP_001430711.1 CDS Rcas_0564 NC_009767.1 753334 753630 R KEGG: rrs:RoseRS_3856 hypothetical protein; hypothetical protein complement(753334..753630) Roseiflexus castenholzii DSM 13941 5538027 YP_001430712.1 CDS Rcas_0565 NC_009767.1 753636 754709 R PFAM: band 7 protein; KEGG: rrs:RoseRS_3855 band 7 protein; hypothetical protein complement(753636..754709) Roseiflexus castenholzii DSM 13941 5538028 YP_001430713.1 CDS Rcas_0566 NC_009767.1 755361 756941 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_3854 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 755361..756941 Roseiflexus castenholzii DSM 13941 5538029 YP_001430714.1 CDS Rcas_0567 NC_009767.1 756980 759502 D KEGG: rrs:RoseRS_3853 hypothetical protein; hypothetical protein 756980..759502 Roseiflexus castenholzii DSM 13941 5538030 YP_001430715.1 CDS Rcas_0568 NC_009767.1 760029 760400 D KEGG: rrs:RoseRS_3852 hypothetical protein; hypothetical protein 760029..760400 Roseiflexus castenholzii DSM 13941 5538031 YP_001430716.1 CDS Rcas_0569 NC_009767.1 760634 762010 D PFAM: transcriptional regulator domain protein; KEGG: rrs:RoseRS_3851 two component transcriptional regulator, winged helix family; winged helix family two component response transcriptional regulator 760634..762010 Roseiflexus castenholzii DSM 13941 5538032 YP_001430717.1 CDS Rcas_0570 NC_009767.1 762152 763159 D PFAM: protein of unknown function DUF897; KEGG: rrs:RoseRS_1985 protein of unknown function DUF897; hypothetical protein 762152..763159 Roseiflexus castenholzii DSM 13941 5538033 YP_001430718.1 CDS Rcas_0571 NC_009767.1 763378 763680 D KEGG: rrs:RoseRS_3849 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 763378..763680 Roseiflexus castenholzii DSM 13941 5538034 YP_001430719.1 CDS Rcas_0572 NC_009767.1 763756 766686 D TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rrs:RoseRS_3848 excinuclease ABC, A subunit; excinuclease ABC subunit A 763756..766686 Roseiflexus castenholzii DSM 13941 5538035 YP_001430720.1 CDS Rcas_0573 NC_009767.1 766690 767073 R PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3847 HEPN domain protein; HEPN domain-containing protein complement(766690..767073) Roseiflexus castenholzii DSM 13941 5538036 YP_001430721.1 CDS Rcas_0574 NC_009767.1 767060 767422 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3846 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(767060..767422) Roseiflexus castenholzii DSM 13941 5538037 YP_001430722.1 CDS Rcas_0575 NC_009767.1 767419 767814 R PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3847 HEPN domain protein; HEPN domain-containing protein complement(767419..767814) Roseiflexus castenholzii DSM 13941 5538038 YP_001430723.1 CDS Rcas_0576 NC_009767.1 767801 768166 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3846 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(767801..768166) Roseiflexus castenholzii DSM 13941 5538039 YP_001430724.1 CDS Rcas_0577 NC_009767.1 768278 769840 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3845 protein kinase; serine/threonine protein kinase 768278..769840 Roseiflexus castenholzii DSM 13941 5538040 YP_001430725.1 CDS Rcas_0578 NC_009767.1 769850 771181 D PFAM: cell cycle protein; KEGG: rrs:RoseRS_3844 cell cycle protein; cell cycle protein 769850..771181 Roseiflexus castenholzii DSM 13941 5538041 YP_001430726.1 CDS Rcas_0579 NC_009767.1 771521 773257 D PFAM: penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_3840 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 771521..773257 Roseiflexus castenholzii DSM 13941 5538042 YP_001430727.1 CDS Rcas_0580 NC_009767.1 773254 774213 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3839 tetratricopeptide TPR_2 repeat protein; hypothetical protein 773254..774213 Roseiflexus castenholzii DSM 13941 5538043 YP_001430728.1 CDS Rcas_0581 NC_009767.1 774413 775699 R KEGG: rrs:RoseRS_3488 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I complement(774413..775699) Roseiflexus castenholzii DSM 13941 5538044 YP_001430729.1 CDS Rcas_0582 NC_009767.1 776578 776823 R KEGG: rrs:RoseRS_4145 hypothetical protein; hypothetical protein complement(776578..776823) Roseiflexus castenholzii DSM 13941 5538045 YP_001430730.1 CDS Rcas_0583 NC_009767.1 777059 778198 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4146 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 777059..778198 Roseiflexus castenholzii DSM 13941 5538046 YP_001430731.1 CDS Rcas_0584 NC_009767.1 778258 778824 D KEGG: rrs:RoseRS_4147 hypothetical protein; hypothetical protein 778258..778824 Roseiflexus castenholzii DSM 13941 5538047 YP_001430732.1 CDS Rcas_0585 NC_009767.1 779287 779931 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rrs:RoseRS_4153 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU complement(779287..779931) Roseiflexus castenholzii DSM 13941 5538048 YP_001430733.1 CDS Rcas_0586 NC_009767.1 779958 780776 R KEGG: rrs:RoseRS_4154 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase complement(779958..780776) Roseiflexus castenholzii DSM 13941 5538049 YP_001430734.1 CDS Rcas_0587 NC_009767.1 780776 782035 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4155 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease complement(780776..782035) Roseiflexus castenholzii DSM 13941 5538050 YP_001430735.1 CDS Rcas_0588 NC_009767.1 782032 782991 R TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4156 phosphate ABC transporter, inner membrane subunit PstC; phosphate ABC transporter permease complement(782032..782991) Roseiflexus castenholzii DSM 13941 5538051 YP_001430736.1 CDS Rcas_0589 NC_009767.1 783215 785224 R TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_4157 phosphate binding protein; phosphate binding protein complement(783215..785224) Roseiflexus castenholzii DSM 13941 5538052 YP_001430737.1 CDS Rcas_0590 NC_009767.1 785537 787186 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_4158 anti-sigma-factor antagonist; anti-sigma-factor antagonist 785537..787186 Roseiflexus castenholzii DSM 13941 5538053 YP_001430738.1 CDS Rcas_0591 NC_009767.1 787497 787835 D KEGG: rrs:RoseRS_4159 hypothetical protein; hypothetical protein 787497..787835 Roseiflexus castenholzii DSM 13941 5538054 YP_001430739.1 CDS Rcas_0592 NC_009767.1 787965 789515 D KEGG: rrs:RoseRS_4160 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; nitrogen specific signal transduction histidine kinase NtrB 787965..789515 Roseiflexus castenholzii DSM 13941 5538055 YP_001430740.1 CDS Rcas_0593 NC_009767.1 789484 790287 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4161 two component transcriptional regulator, winged helix family; two component transcriptional regulator 789484..790287 Roseiflexus castenholzii DSM 13941 5538056 YP_001430741.1 CDS Rcas_0594 NC_009767.1 790349 791290 D PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_4162 pyruvate carboxyltransferase; pyruvate carboxyltransferase 790349..791290 Roseiflexus castenholzii DSM 13941 5538057 YP_001430742.1 CDS Rcas_0595 NC_009767.1 791541 793025 D KEGG: rrs:RoseRS_4163 hypothetical protein; hypothetical protein 791541..793025 Roseiflexus castenholzii DSM 13941 5538058 YP_001430743.1 CDS Rcas_0596 NC_009767.1 793317 795419 D SMART: Pyrrolo-quinoline quinone; KEGG: rrs:RoseRS_4243 nucleic acid binding, OB-fold, tRNA/helicase-type; Pyrrolo-quinoline quinone 793317..795419 Roseiflexus castenholzii DSM 13941 5538059 YP_001430744.1 CDS Rcas_0597 NC_009767.1 795416 796015 D hypothetical protein 795416..796015 Roseiflexus castenholzii DSM 13941 5538060 YP_001430745.1 CDS Rcas_0598 NC_009767.1 796230 797735 R PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: rrs:RoseRS_3514 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase complement(796230..797735) Roseiflexus castenholzii DSM 13941 5538061 YP_001430746.1 CDS Rcas_0599 NC_009767.1 798218 798895 R TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3515 haloacid dehalogenase, type II; type II haloacid dehalogenase complement(798218..798895) Roseiflexus castenholzii DSM 13941 5538062 YP_001430747.1 CDS Rcas_0600 NC_009767.1 799136 799747 R KEGG: rrs:RoseRS_3517 DNA polymerase, beta domain protein region; hypothetical protein complement(799136..799747) Roseiflexus castenholzii DSM 13941 5538063 YP_001430748.1 CDS Rcas_0601 NC_009767.1 799871 802399 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(799871..802399) Roseiflexus castenholzii DSM 13941 5538064 YP_001430749.1 CDS Rcas_0602 NC_009767.1 802409 803254 R TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: rrs:RoseRS_3519 DegV family protein; degV family protein complement(802409..803254) Roseiflexus castenholzii DSM 13941 5538065 YP_001430750.1 CDS Rcas_0603 NC_009767.1 803258 804106 R TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: rrs:RoseRS_3520 DegV family protein; degV family protein complement(803258..804106) Roseiflexus castenholzii DSM 13941 5538066 YP_001430751.1 CDS Rcas_0604 NC_009767.1 804144 805694 R PFAM: Dak phosphatase; KEGG: rrs:RoseRS_3521 Dak phosphatase; Dak phosphatase complement(804144..805694) Roseiflexus castenholzii DSM 13941 5538067 YP_001430752.1 CDS Rcas_0605 NC_009767.1 805694 806053 R PFAM: protein of unknown function DUF322; KEGG: chy:CHY_1997 hypothetical protein; hypothetical protein complement(805694..806053) Roseiflexus castenholzii DSM 13941 5538068 YP_001430753.1 CDS Rcas_0606 NC_009767.1 806155 806361 D PFAM: ribosomal protein L28; KEGG: rrs:RoseRS_3523 ribosomal protein L28; 50S ribosomal protein L28 806155..806361 Roseiflexus castenholzii DSM 13941 5538069 YP_001430754.1 CDS Rcas_0607 NC_009767.1 806453 807268 R TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: rrs:RoseRS_3524 Cof-like hydrolase; cof family hydrolase complement(806453..807268) Roseiflexus castenholzii DSM 13941 5538070 YP_001430755.1 CDS Rcas_0608 NC_009767.1 807243 808280 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_0946 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(807243..808280) Roseiflexus castenholzii DSM 13941 5538071 YP_001430756.1 CDS Rcas_0609 NC_009767.1 808343 808546 D hypothetical protein 808343..808546 Roseiflexus castenholzii DSM 13941 5538072 YP_001430757.1 CDS Rcas_0610 NC_009767.1 808534 809511 D KEGG: rrs:RoseRS_3489 hypothetical protein; hypothetical protein 808534..809511 Roseiflexus castenholzii DSM 13941 5538073 YP_001430758.1 CDS Rcas_0611 NC_009767.1 809530 810966 R PFAM: aldehyde dehydrogenase; acyl-CoA reductase; KEGG: rrs:RoseRS_3490 aldehyde dehydrogenase; aldehyde dehydrogenase complement(809530..810966) Roseiflexus castenholzii DSM 13941 5538074 YP_001430759.1 CDS Rcas_0613 NC_009767.1 811647 812636 D PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_3504 allergen V5/TPX-1 family protein; SCP-like extracellular 811647..812636 Roseiflexus castenholzii DSM 13941 5538076 YP_001430760.1 CDS Rcas_0614 NC_009767.1 812733 813941 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein complement(812733..813941) Roseiflexus castenholzii DSM 13941 5538077 YP_001430761.1 CDS Rcas_0616 NC_009767.1 815092 815781 R PFAM: integrase family protein; KEGG: rrs:RoseRS_0840 integron integrase; integrase family protein complement(815092..815781) Roseiflexus castenholzii DSM 13941 5538079 YP_001430762.1 CDS Rcas_0617 NC_009767.1 816260 816607 D KEGG: syf:Synpcc7942_B2653 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin MazF 816260..816607 Roseiflexus castenholzii DSM 13941 5538080 YP_001430763.1 CDS Rcas_0618 NC_009767.1 816723 817325 D KEGG: pth:PTH_0862 hypothetical protein; hypothetical protein 816723..817325 Roseiflexus castenholzii DSM 13941 5538081 YP_001430764.1 CDS Rcas_0620 NC_009767.1 818837 819718 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_3507 protein of unknown function DUF6, transmembrane; hypothetical protein 818837..819718 Roseiflexus castenholzii DSM 13941 5538083 YP_001430765.1 CDS Rcas_0621 NC_009767.1 819773 820906 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3508 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(819773..820906) Roseiflexus castenholzii DSM 13941 5538084 YP_001430766.1 CDS Rcas_0622 NC_009767.1 820924 821904 R PFAM: Terpene synthase metal-binding domain protein; KEGG: rrs:RoseRS_3509 terpene synthase, metal-binding domain protein; terpene synthase metal-binding domain-containing protein complement(820924..821904) Roseiflexus castenholzii DSM 13941 5538085 YP_001430767.1 CDS Rcas_0623 NC_009767.1 821932 822768 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3510 methyltransferase type 11; type 11 methyltransferase complement(821932..822768) Roseiflexus castenholzii DSM 13941 5538086 YP_001430768.1 CDS Rcas_0624 NC_009767.1 822993 824105 R PFAM: beta-lactamase; KEGG: rrs:RoseRS_3511 beta-lactamase; beta-lactamase complement(822993..824105) Roseiflexus castenholzii DSM 13941 5538087 YP_001430769.1 CDS Rcas_0625 NC_009767.1 824389 825735 R PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rrs:RoseRS_0865 virulence factor MviN family protein; virulence factor MVIN family protein complement(824389..825735) Roseiflexus castenholzii DSM 13941 5538088 YP_001430770.1 CDS Rcas_0626 NC_009767.1 825732 826733 R PFAM: Uroporphyrinogen decarboxylase (URO-D); KEGG: rrs:RoseRS_0866 uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(825732..826733) Roseiflexus castenholzii DSM 13941 5538089 YP_001430771.1 CDS Rcas_0627 NC_009767.1 827454 828326 D PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_0868 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 827454..828326 Roseiflexus castenholzii DSM 13941 5538090 YP_001430772.1 CDS Rcas_0629 NC_009767.1 828865 829371 R KEGG: tko:TK0918 hypothetical protein; hypothetical protein complement(828865..829371) Roseiflexus castenholzii DSM 13941 5538092 YP_001430773.1 CDS Rcas_0630 NC_009767.1 829371 829664 R hypothetical protein complement(829371..829664) Roseiflexus castenholzii DSM 13941 5538093 YP_001430774.1 CDS Rcas_0631 NC_009767.1 830213 831889 R PFAM: ABC-1 domain protein; KEGG: rrs:RoseRS_0578 ABC-1 domain protein; hypothetical protein complement(830213..831889) Roseiflexus castenholzii DSM 13941 5538094 YP_001430775.1 CDS Rcas_0632 NC_009767.1 832667 834139 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(832667..834139) Roseiflexus castenholzii DSM 13941 5538095 YP_001430776.1 CDS Rcas_0633 NC_009767.1 834136 835200 R PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_0576 aminotransferase, class I and II; class I/II aminotransferase complement(834136..835200) Roseiflexus castenholzii DSM 13941 5538096 YP_001430777.1 CDS Rcas_0634 NC_009767.1 835179 835733 R PFAM: cobalbumin biosynthesis protein; KEGG: rrs:RoseRS_0575 adenosylcobinamide-phosphate guanylyltransferase; adenosylcobinamide-phosphate guanylyltransferase complement(835179..835733) Roseiflexus castenholzii DSM 13941 5538097 YP_001430778.1 CDS Rcas_0635 NC_009767.1 835730 837133 R TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_0574 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase complement(835730..837133) Roseiflexus castenholzii DSM 13941 5538098 YP_001430779.1 CDS Rcas_0636 NC_009767.1 837133 837948 R TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0573 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase complement(837133..837948) Roseiflexus castenholzii DSM 13941 5538099 YP_001430780.1 CDS Rcas_0637 NC_009767.1 837993 840506 R TIGRFAM: precorrin-3B C17-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: rrs:RoseRS_0572 precorrin-3B C17-methyltransferase; precorrin-3B C17-methyltransferase complement(837993..840506) Roseiflexus castenholzii DSM 13941 5538100 YP_001430781.1 CDS Rcas_0638 NC_009767.1 840503 841318 R KEGG: rrs:RoseRS_0571 precorrin-4 C11-methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-4 C11-methyltransferase complement(840503..841318) Roseiflexus castenholzii DSM 13941 5538101 YP_001430782.1 CDS Rcas_0639 NC_009767.1 841315 842043 R TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_0570 precorrin-2 C20-methyltransferase; precorrin-2 C20-methyltransferase complement(841315..842043) Roseiflexus castenholzii DSM 13941 5538102 YP_001430783.1 CDS Rcas_0640 NC_009767.1 842036 843262 R KEGG: rrs:RoseRS_0569 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; precorrin-6y C5,15-methyltransferase subunit CbiE complement(842036..843262) Roseiflexus castenholzii DSM 13941 5538103 YP_001430784.1 CDS cbiD NC_009767.1 843259 844500 R Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase complement(843259..844500) Roseiflexus castenholzii DSM 13941 5538104 YP_001430785.1 CDS Rcas_0642 NC_009767.1 844506 845174 R PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: rrs:RoseRS_0567 precorrin-8X methylmutase CbiC/CobH; precorrin-8X methylmutase CbiC/CobH complement(844506..845174) Roseiflexus castenholzii DSM 13941 5538105 YP_001430786.1 CDS Rcas_0643 NC_009767.1 845174 845692 R KEGG: rrs:RoseRS_0566 multimeric flavodoxin WrbA-like protein; multimeric flavodoxin WrbA-like protein complement(845174..845692) Roseiflexus castenholzii DSM 13941 5538106 YP_001430787.1 CDS Rcas_0644 NC_009767.1 845840 847258 R PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rrs:RoseRS_0565 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein complement(845840..847258) Roseiflexus castenholzii DSM 13941 5538107 YP_001430788.1 CDS Rcas_0645 NC_009767.1 847657 848592 R TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: rrs:RoseRS_0564 cobalamin biosynthesis protein CobD; cobalamin biosynthesis protein CobD complement(847657..848592) Roseiflexus castenholzii DSM 13941 5538108 YP_001430789.1 CDS Rcas_0646 NC_009767.1 848593 849327 R KEGG: rrs:RoseRS_0563 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase complement(848593..849327) Roseiflexus castenholzii DSM 13941 5538109 YP_001430790.1 CDS Rcas_0647 NC_009767.1 849675 850736 R PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; KEGG: rrs:RoseRS_0559 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(849675..850736) Roseiflexus castenholzii DSM 13941 5538110 YP_001430791.1 CDS Rcas_0648 NC_009767.1 850963 855192 R KEGG: rrs:RoseRS_0558 cobaltochelatase, CobN subunit; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase; cobaltochelatase complement(850963..855192) Roseiflexus castenholzii DSM 13941 5538111 YP_001430792.1 CDS Rcas_0649 NC_009767.1 855321 855989 R KEGG: rrs:RoseRS_0557 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase complement(855321..855989) Roseiflexus castenholzii DSM 13941 5538112 YP_001430793.1 CDS Rcas_0650 NC_009767.1 856636 857865 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0858 ABC transporter related; ABC transporter-like protein complement(856636..857865) Roseiflexus castenholzii DSM 13941 5538113 YP_001430794.1 CDS Rcas_0651 NC_009767.1 858272 858643 R hypothetical protein complement(858272..858643) Roseiflexus castenholzii DSM 13941 5538114 YP_001430795.1 CDS Rcas_0652 NC_009767.1 858656 859657 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3711 protein of unknown function DUF820; hypothetical protein complement(858656..859657) Roseiflexus castenholzii DSM 13941 5538115 YP_001430796.1 CDS Rcas_0653 NC_009767.1 860126 860977 D PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_0537 metallophosphoesterase; metallophosphoesterase 860126..860977 Roseiflexus castenholzii DSM 13941 5538116 YP_001430797.1 CDS Rcas_0654 NC_009767.1 860992 861972 D PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_0536 ATPase associated with various cellular activities, AAA_5; ATPase 860992..861972 Roseiflexus castenholzii DSM 13941 5538117 YP_001430798.1 CDS Rcas_0655 NC_009767.1 862054 863442 D PFAM: VWA containing CoxE family protein; KEGG: rrs:RoseRS_0535 VWA containing CoxE family protein; von Willebrand factor A 862054..863442 Roseiflexus castenholzii DSM 13941 5538118 YP_001430799.1 CDS Rcas_0656 NC_009767.1 863445 865019 R catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase complement(863445..865019) Roseiflexus castenholzii DSM 13941 5538119 YP_001430800.1 CDS Rcas_0657 NC_009767.1 865047 868121 R TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: rrs:RoseRS_0823 preprotein translocase, SecA subunit; preprotein translocase subunit SecA complement(865047..868121) Roseiflexus castenholzii DSM 13941 5538120 YP_001430801.1 CDS Rcas_0658 NC_009767.1 868398 870086 D KEGG: rrs:RoseRS_0824 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase 868398..870086 Roseiflexus castenholzii DSM 13941 5538121 YP_001430802.1 CDS Rcas_0659 NC_009767.1 870070 870696 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rrs:RoseRS_0825 uncharacterized MobA-related protein-like protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 870070..870696 Roseiflexus castenholzii DSM 13941 5538122 YP_001430803.1 CDS Rcas_0660 NC_009767.1 870706 871695 D PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_0826 molybdopterin binding domain; molybdopterin binding domain-containing protein 870706..871695 Roseiflexus castenholzii DSM 13941 5538123 YP_001430804.1 CDS Rcas_0661 NC_009767.1 871684 872484 R KEGG: rrs:RoseRS_1031 hypothetical protein; hypothetical protein complement(871684..872484) Roseiflexus castenholzii DSM 13941 5538124 YP_001430805.1 CDS Rcas_0663 NC_009767.1 874206 874625 D PFAM: protein of unknown function DUF59; KEGG: rrs:RoseRS_2837 protein of unknown function DUF59; hypothetical protein 874206..874625 Roseiflexus castenholzii DSM 13941 5538127 YP_001430806.1 CDS Rcas_0664 NC_009767.1 874653 875657 D PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_2838 amidohydrolase 2; amidohydrolase 874653..875657 Roseiflexus castenholzii DSM 13941 5538128 YP_001430807.1 CDS Rcas_0665 NC_009767.1 875925 876221 D PFAM: protein of unknown function DUF77; KEGG: rrs:RoseRS_0668 protein of unknown function DUF77; hypothetical protein 875925..876221 Roseiflexus castenholzii DSM 13941 5538129 YP_001430808.1 CDS Rcas_0666 NC_009767.1 876211 877029 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0669 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 876211..877029 Roseiflexus castenholzii DSM 13941 5538130 YP_001430809.1 CDS Rcas_0667 NC_009767.1 877026 878015 D PFAM: NMT1/THI5 like domain protein; KEGG: rrs:RoseRS_0670 substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5-like domain-containing protein 877026..878015 Roseiflexus castenholzii DSM 13941 5538131 YP_001430810.1 CDS Rcas_0668 NC_009767.1 878034 878801 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0671 ABC transporter related; ABC transporter-like protein 878034..878801 Roseiflexus castenholzii DSM 13941 5538132 YP_001430811.1 CDS Rcas_0669 NC_009767.1 878752 880518 R KEGG: tth:TTC0629 HD-hydrolase domain; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein complement(878752..880518) Roseiflexus castenholzii DSM 13941 5538133 YP_001430812.1 CDS Rcas_0670 NC_009767.1 880515 880880 R PFAM: response regulator receiver; KEGG: noc:Noc_1329 response regulator receiver; response regulator receiver protein complement(880515..880880) Roseiflexus castenholzii DSM 13941 5538134 YP_001430813.1 CDS Rcas_0671 NC_009767.1 880873 882480 R KEGG: noc:Noc_1328 KaiC; PFAM: Circadian clock protein KaiC central region; KaiA binding; SMART: AAA ATPase; circadian clock protein, KaiC complement(880873..882480) Roseiflexus castenholzii DSM 13941 5538135 YP_001430814.1 CDS Rcas_0672 NC_009767.1 882772 883212 R KEGG: rrs:RoseRS_0160 hypothetical protein; hypothetical protein complement(882772..883212) Roseiflexus castenholzii DSM 13941 5538136 YP_001430815.1 CDS Rcas_0673 NC_009767.1 883541 883819 R PFAM: histone family protein DNA-binding protein; KEGG: rrs:RoseRS_4008 histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(883541..883819) Roseiflexus castenholzii DSM 13941 5538137 YP_001430816.1 CDS Rcas_0674 NC_009767.1 884226 884588 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_0161 response regulator receiver protein; response regulator receiver protein 884226..884588 Roseiflexus castenholzii DSM 13941 5538138 YP_001430817.1 CDS Rcas_0675 NC_009767.1 884661 885062 R PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_0162 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor complement(884661..885062) Roseiflexus castenholzii DSM 13941 5538139 YP_001430818.1 CDS Rcas_0676 NC_009767.1 885049 885432 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0163 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(885049..885432) Roseiflexus castenholzii DSM 13941 5538140 YP_001430819.1 CDS Rcas_0677 NC_009767.1 885713 886150 D PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0164 NUDIX hydrolase; NUDIX hydrolase 885713..886150 Roseiflexus castenholzii DSM 13941 5538141 YP_001430820.1 CDS Rcas_0678 NC_009767.1 886321 887295 R PFAM: ROK family protein; KEGG: rrs:RoseRS_0099 ROK family protein; ROK family protein complement(886321..887295) Roseiflexus castenholzii DSM 13941 5538143 YP_001430821.1 CDS Rcas_0679 NC_009767.1 887381 889258 R KEGG: rrs:RoseRS_0098 hypothetical protein; hypothetical protein complement(887381..889258) Roseiflexus castenholzii DSM 13941 5538144 YP_001430822.1 CDS Rcas_0680 NC_009767.1 889481 890443 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0097 thioredoxin reductase; thioredoxin reductase 889481..890443 Roseiflexus castenholzii DSM 13941 5538145 YP_001430823.1 CDS Rcas_0681 NC_009767.1 890454 891722 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rrs:RoseRS_0096 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 890454..891722 Roseiflexus castenholzii DSM 13941 5538146 YP_001430824.1 CDS Rcas_0684 NC_009767.1 893804 893983 R KEGG: rrs:RoseRS_0146 hypothetical protein; hypothetical protein complement(893804..893983) Roseiflexus castenholzii DSM 13941 5538149 YP_001430825.1 CDS Rcas_0685 NC_009767.1 894712 896211 D PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_0147 radical SAM domain protein; radical SAM domain-containing protein 894712..896211 Roseiflexus castenholzii DSM 13941 5538150 YP_001430826.1 CDS Rcas_0686 NC_009767.1 896218 899313 R KEGG: rrs:RoseRS_0148 tetratricopeptide domain protein; hypothetical protein complement(896218..899313) Roseiflexus castenholzii DSM 13941 5538151 YP_001430827.1 CDS Rcas_0687 NC_009767.1 899332 900846 R KEGG: rrs:RoseRS_0149 hypothetical protein; hypothetical protein complement(899332..900846) Roseiflexus castenholzii DSM 13941 5538152 YP_001430828.1 CDS Rcas_0688 NC_009767.1 900839 902080 R KEGG: rrs:RoseRS_0150 hypothetical protein; hypothetical protein complement(900839..902080) Roseiflexus castenholzii DSM 13941 5538153 YP_001430829.1 CDS Rcas_0689 NC_009767.1 902356 903741 R PFAM: transcriptional regulator domain protein; KEGG: rrs:RoseRS_0151 two component transcriptional regulator, winged helix family; winged helix family two component response transcriptional regulator complement(902356..903741) Roseiflexus castenholzii DSM 13941 5538154 YP_001430830.1 CDS Rcas_0690 NC_009767.1 903745 906129 R KEGG: rrs:RoseRS_0152 hypothetical protein; hypothetical protein complement(903745..906129) Roseiflexus castenholzii DSM 13941 5538155 YP_001430831.1 CDS Rcas_0691 NC_009767.1 906335 908437 R PFAM: protein of unknown function DUF87; KEGG: sth:STH2259 hypothetical protein; hypothetical protein complement(906335..908437) Roseiflexus castenholzii DSM 13941 5538156 YP_001430832.1 CDS Rcas_0692 NC_009767.1 908449 909591 R KEGG: nwi:Nwi_1955 hypothetical protein; hypothetical protein complement(908449..909591) Roseiflexus castenholzii DSM 13941 5538157 YP_001430833.1 CDS Rcas_0693 NC_009767.1 910056 910910 R KEGG: noc:Noc_0498 hypothetical protein; hypothetical protein complement(910056..910910) Roseiflexus castenholzii DSM 13941 5538158 YP_001430834.1 CDS Rcas_0694 NC_009767.1 910995 911687 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1763 ABC transporter related protein; ABC transporter-like protein 910995..911687 Roseiflexus castenholzii DSM 13941 5538159 YP_001430835.1 CDS Rcas_0695 NC_009767.1 911671 914577 R PFAM: peptidase M16 domain protein; Peptidase M16C associated domain protein; KEGG: rrs:RoseRS_0158 peptidase M16C associated domain protein; peptidase M16C associated domain-containing protein complement(911671..914577) Roseiflexus castenholzii DSM 13941 5538160 YP_001430836.1 CDS Rcas_0696 NC_009767.1 915103 915738 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0090 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 915103..915738 Roseiflexus castenholzii DSM 13941 5538161 YP_001430837.1 CDS Rcas_0697 NC_009767.1 915946 917466 D PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_4343 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 915946..917466 Roseiflexus castenholzii DSM 13941 5538162 YP_001430838.1 CDS Rcas_0698 NC_009767.1 917463 918461 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 917463..918461 Roseiflexus castenholzii DSM 13941 5538163 YP_001430839.1 CDS Rcas_0699 NC_009767.1 918439 921723 R PFAM: transcriptional activator domain; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4345 transcriptional activator domain; transcriptional activator domain-containing protein complement(918439..921723) Roseiflexus castenholzii DSM 13941 5538164 YP_001430840.1 CDS Rcas_0700 NC_009767.1 921812 922105 D KEGG: rrs:RoseRS_4346 hypothetical protein; hypothetical protein 921812..922105 Roseiflexus castenholzii DSM 13941 5538165 YP_001430841.1 CDS fabG NC_009767.1 922383 923126 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(922383..923126) Roseiflexus castenholzii DSM 13941 5538166 YP_001430842.1 CDS Rcas_0702 NC_009767.1 923379 924569 R KEGG: rrs:RoseRS_4348 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(923379..924569) Roseiflexus castenholzii DSM 13941 5538167 YP_001430843.1 CDS Rcas_0703 NC_009767.1 925010 925555 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4349 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 925010..925555 Roseiflexus castenholzii DSM 13941 5538168 YP_001430844.1 CDS Rcas_0704 NC_009767.1 925606 926310 D PFAM: 2-phosphosulfolactate phosphatase; KEGG: rrs:RoseRS_4350 2-phosphosulfolactate phosphatase; 2-phosphosulfolactate phosphatase 925606..926310 Roseiflexus castenholzii DSM 13941 5538169 YP_001430845.1 CDS Rcas_0705 NC_009767.1 926584 926973 D PFAM: HEPN domain protein; KEGG: pth:PTH_0137 hypothetical protein; HEPN domain-containing protein 926584..926973 Roseiflexus castenholzii DSM 13941 5538170 YP_001430846.1 CDS Rcas_0706 NC_009767.1 926930 927289 D KEGG: rrs:RoseRS_4420 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 926930..927289 Roseiflexus castenholzii DSM 13941 5538171 YP_001430847.1 CDS Rcas_0707 NC_009767.1 927867 929996 D KEGG: rrs:RoseRS_4351 hypothetical protein; hypothetical protein 927867..929996 Roseiflexus castenholzii DSM 13941 5538172 YP_001430848.1 CDS Rcas_0708 NC_009767.1 930631 931812 D PFAM: protein of unknown function DUF711; KEGG: rrs:RoseRS_4352 protein of unknown function DUF711; hypothetical protein 930631..931812 Roseiflexus castenholzii DSM 13941 5538173 YP_001430849.1 CDS Rcas_0709 NC_009767.1 932092 933087 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_4355 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 932092..933087 Roseiflexus castenholzii DSM 13941 5538174 YP_001430850.1 CDS pgi NC_009767.1 933091 934722 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 933091..934722 Roseiflexus castenholzii DSM 13941 5538175 YP_001430851.1 CDS Rcas_0712 NC_009767.1 935342 935575 R PFAM: protein of unknown function DUF433; KEGG: ana:asr2172 hypothetical protein; hypothetical protein complement(935342..935575) Roseiflexus castenholzii DSM 13941 5538177 YP_001430852.1 CDS Rcas_0713 NC_009767.1 935682 936245 D PFAM: protein of unknown function UPF0079; KEGG: rrs:RoseRS_4357 protein of unknown function UPF0079; hypothetical protein 935682..936245 Roseiflexus castenholzii DSM 13941 5538178 YP_001430853.1 CDS Rcas_0714 NC_009767.1 936250 936900 D PFAM: peptidase M22 glycoprotease; KEGG: rrs:RoseRS_4358 peptidase M22, glycoprotease; peptidase M22 glycoprotease 936250..936900 Roseiflexus castenholzii DSM 13941 5538179 YP_001430854.1 CDS Rcas_0715 NC_009767.1 937061 938851 D PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: rrs:RoseRS_4359 aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 937061..938851 Roseiflexus castenholzii DSM 13941 5538180 YP_001430855.1 CDS Rcas_0716 NC_009767.1 938943 939716 D KEGG: rrs:RoseRS_4360 hypothetical protein; hypothetical protein 938943..939716 Roseiflexus castenholzii DSM 13941 5538181 YP_001430856.1 CDS Rcas_0717 NC_009767.1 939958 941874 D KEGG: rrs:RoseRS_4361 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 939958..941874 Roseiflexus castenholzii DSM 13941 5538182 YP_001430857.1 CDS Rcas_0718 NC_009767.1 941999 942766 D PFAM: protein of unknown function DUF28; KEGG: rrs:RoseRS_4362 protein of unknown function DUF28; hypothetical protein 941999..942766 Roseiflexus castenholzii DSM 13941 5538183 YP_001430858.1 CDS ruvC NC_009767.1 942770 943276 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 942770..943276 Roseiflexus castenholzii DSM 13941 5538184 YP_001430859.1 CDS Rcas_0720 NC_009767.1 943302 943979 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4381 methyltransferase type 11; type 11 methyltransferase 943302..943979 Roseiflexus castenholzii DSM 13941 5538185 YP_001430860.1 CDS Rcas_0721 NC_009767.1 943986 944264 D KEGG: rrs:RoseRS_4382 hypothetical protein; hypothetical protein 943986..944264 Roseiflexus castenholzii DSM 13941 5538186 YP_001430861.1 CDS Rcas_0722 NC_009767.1 944319 945893 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4383 glycosyl transferase, group 1; group 1 glycosyl transferase complement(944319..945893) Roseiflexus castenholzii DSM 13941 5538187 YP_001430862.1 CDS Rcas_0723 NC_009767.1 946098 946832 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4384 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 946098..946832 Roseiflexus castenholzii DSM 13941 5538188 YP_001430863.1 CDS Rcas_0724 NC_009767.1 946886 948151 D PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rrs:RoseRS_4385 Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 946886..948151 Roseiflexus castenholzii DSM 13941 5538189 YP_001430864.1 CDS Rcas_0725 NC_009767.1 948194 949180 R KEGG: rrs:RoseRS_3208 ABC-type transport system involved in multi-copper enzyme maturation permease component-like protein; multi-copper enzyme maturation ABC transporter permease-like protein complement(948194..949180) Roseiflexus castenholzii DSM 13941 5538190 YP_001430865.1 CDS Rcas_0726 NC_009767.1 949164 950114 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3209 ABC transporter related; ABC transporter-like protein complement(949164..950114) Roseiflexus castenholzii DSM 13941 5538191 YP_001430866.1 CDS Rcas_0727 NC_009767.1 950128 951315 R KEGG: rrs:RoseRS_3210 protein of unknown function DUF11; hypothetical protein complement(950128..951315) Roseiflexus castenholzii DSM 13941 5538192 YP_001430867.1 CDS Rcas_0728 NC_009767.1 951804 952376 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_4386 response regulator receiver protein; response regulator receiver protein 951804..952376 Roseiflexus castenholzii DSM 13941 5538193 YP_001430868.1 CDS Rcas_0729 NC_009767.1 952381 952956 R PFAM: SNARE associated Golgi protein; KEGG: rrs:RoseRS_4387 hypothetical protein; hypothetical protein complement(952381..952956) Roseiflexus castenholzii DSM 13941 5538194 YP_001430869.1 CDS Rcas_0730 NC_009767.1 952988 953764 R KEGG: rrs:RoseRS_4388 hypothetical protein; transmembrane anti-sigma factor complement(952988..953764) Roseiflexus castenholzii DSM 13941 5538195 YP_001430870.1 CDS Rcas_0731 NC_009767.1 953821 954426 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4389 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(953821..954426) Roseiflexus castenholzii DSM 13941 5538196 YP_001430871.1 CDS Rcas_0732 NC_009767.1 954522 956960 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_4390 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(954522..956960) Roseiflexus castenholzii DSM 13941 5538197 YP_001430872.1 CDS Rcas_0733 NC_009767.1 957451 958908 D PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4391 O-antigen polymerase; O-antigen polymerase 957451..958908 Roseiflexus castenholzii DSM 13941 5538198 YP_001430873.1 CDS Rcas_0734 NC_009767.1 959306 960385 R PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: sfu:Sfum_0699 threonine aldolase; threonine aldolase complement(959306..960385) Roseiflexus castenholzii DSM 13941 5538199 YP_001430874.1 CDS Rcas_0735 NC_009767.1 961278 962144 D PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: rrs:RoseRS_4392 methylenetetrahydrofolate dehydrogenase (NADP(+)); methenyltetrahydrofolate cyclohydrolase 961278..962144 Roseiflexus castenholzii DSM 13941 5538200 YP_001430875.1 CDS Rcas_0736 NC_009767.1 962721 963785 D PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_4393 nucleotidyl transferase; nucleotidyl transferase 962721..963785 Roseiflexus castenholzii DSM 13941 5538202 YP_001430876.1 CDS Rcas_0737 NC_009767.1 963791 964729 D KEGG: rrs:RoseRS_4394 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 963791..964729 Roseiflexus castenholzii DSM 13941 5538203 YP_001430877.1 CDS Rcas_0738 NC_009767.1 964763 966070 D PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rrs:RoseRS_4395 protein of unknown function DUF21; CBS domain-containing protein 964763..966070 Roseiflexus castenholzii DSM 13941 5538204 YP_001430878.1 CDS Rcas_0739 NC_009767.1 966063 966476 D TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rrs:RoseRS_4396 cytidine deaminase; cytidine deaminase 966063..966476 Roseiflexus castenholzii DSM 13941 5538205 YP_001430879.1 CDS Rcas_0740 NC_009767.1 966821 969319 R PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_4397 nucleotidyl transferase; nucleotidyl transferase complement(966821..969319) Roseiflexus castenholzii DSM 13941 5538206 YP_001430880.1 CDS Rcas_0741 NC_009767.1 969580 969969 R KEGG: rrs:RoseRS_4398 hypothetical protein; hypothetical protein complement(969580..969969) Roseiflexus castenholzii DSM 13941 5538207 YP_001430881.1 CDS Rcas_0742 NC_009767.1 970254 971198 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_4399 protein of unknown function DUF6, transmembrane; hypothetical protein 970254..971198 Roseiflexus castenholzii DSM 13941 5538208 YP_001430882.1 CDS Rcas_0743 NC_009767.1 971721 973763 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_4400 diguanylate cyclase; diguanylate cyclase complement(971721..973763) Roseiflexus castenholzii DSM 13941 5538209 YP_001430883.1 CDS Rcas_0744 NC_009767.1 973900 975126 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4401 major facilitator superfamily MFS_1; major facilitator transporter 973900..975126 Roseiflexus castenholzii DSM 13941 5538210 YP_001430884.1 CDS Rcas_0745 NC_009767.1 975309 976703 D KEGG: rrs:RoseRS_4402 hypothetical protein; hypothetical protein 975309..976703 Roseiflexus castenholzii DSM 13941 5538211 YP_001430885.1 CDS Rcas_0746 NC_009767.1 976856 977632 D KEGG: rrs:RoseRS_4403 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 976856..977632 Roseiflexus castenholzii DSM 13941 5538212 YP_001430886.1 CDS Rcas_0747 NC_009767.1 977798 978550 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_4404 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(977798..978550) Roseiflexus castenholzii DSM 13941 5538213 YP_001430887.1 CDS Rcas_0748 NC_009767.1 978620 979585 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_4405 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; hypothetical protein complement(978620..979585) Roseiflexus castenholzii DSM 13941 5538214 YP_001430888.1 CDS Rcas_0749 NC_009767.1 979788 980921 D KEGG: rrs:RoseRS_4406 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 979788..980921 Roseiflexus castenholzii DSM 13941 5538215 YP_001430889.1 CDS Rcas_0750 NC_009767.1 980928 981272 D KEGG: rrs:RoseRS_4407 hypothetical protein; hypothetical protein 980928..981272 Roseiflexus castenholzii DSM 13941 5538216 YP_001430890.1 CDS Rcas_0751 NC_009767.1 981311 982459 D KEGG: rrs:RoseRS_4408 hypothetical protein; hypothetical protein 981311..982459 Roseiflexus castenholzii DSM 13941 5538217 YP_001430891.1 CDS Rcas_0752 NC_009767.1 984305 986209 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4409 tetratricopeptide TPR_2 repeat protein; hypothetical protein 984305..986209 Roseiflexus castenholzii DSM 13941 5538218 YP_001430892.1 CDS Rcas_0753 NC_009767.1 986316 988295 R KEGG: rrs:RoseRS_4411 membrane protein-like protein; hypothetical protein complement(986316..988295) Roseiflexus castenholzii DSM 13941 5538219 YP_001430893.1 CDS Rcas_0754 NC_009767.1 988285 989406 R KEGG: stp:Strop_1125 hypothetical protein; hypothetical protein complement(988285..989406) Roseiflexus castenholzii DSM 13941 5538220 YP_001430894.1 CDS Rcas_0755 NC_009767.1 989393 990370 R KEGG: pth:PTH_0126 predicted integral membrane protein; hypothetical protein complement(989393..990370) Roseiflexus castenholzii DSM 13941 5538221 YP_001430895.1 CDS Rcas_0756 NC_009767.1 990367 991071 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO2317 methyltransferase; type 11 methyltransferase complement(990367..991071) Roseiflexus castenholzii DSM 13941 5538222 YP_001430896.1 CDS Rcas_0757 NC_009767.1 991074 992150 R PFAM: glycosyl transferase family 2; KEGG: rxy:Rxyl_3118 glycosyl transferase, family 2; glycosyl transferase family protein complement(991074..992150) Roseiflexus castenholzii DSM 13941 5538223 YP_001430897.1 CDS Rcas_0758 NC_009767.1 992137 993252 R PFAM: glycosyl transferase group 1; KEGG: mem:Memar_0202 glycosyl transferase, group 1; group 1 glycosyl transferase complement(992137..993252) Roseiflexus castenholzii DSM 13941 5538224 YP_001430898.1 CDS Rcas_0759 NC_009767.1 993240 994319 R KEGG: sco:SCO4733 integral membrane protein; hypothetical protein complement(993240..994319) Roseiflexus castenholzii DSM 13941 5538225 YP_001430899.1 CDS Rcas_0760 NC_009767.1 994316 995347 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4415 glycosyl transferase, family 2; glycosyl transferase family protein complement(994316..995347) Roseiflexus castenholzii DSM 13941 5538226 YP_001430900.1 CDS Rcas_0761 NC_009767.1 995596 996834 R KEGG: rrs:RoseRS_4416 hypothetical protein; hypothetical protein complement(995596..996834) Roseiflexus castenholzii DSM 13941 5538227 YP_001430901.1 CDS Rcas_0762 NC_009767.1 997620 998033 R PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4417 protein of unknown function DUF86; hypothetical protein complement(997620..998033) Roseiflexus castenholzii DSM 13941 5538228 YP_001430902.1 CDS Rcas_0763 NC_009767.1 997990 998421 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4418 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(997990..998421) Roseiflexus castenholzii DSM 13941 5538229 YP_001430903.1 CDS Rcas_0764 NC_009767.1 998910 1000901 R KEGG: rrs:RoseRS_4419 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase complement(998910..1000901) Roseiflexus castenholzii DSM 13941 5538230 YP_001430904.1 CDS Rcas_0766 NC_009767.1 1003600 1004871 R KEGG: rrs:RoseRS_4421 hypothetical protein; hypothetical protein complement(1003600..1004871) Roseiflexus castenholzii DSM 13941 5538232 YP_001430905.1 CDS Rcas_0767 NC_009767.1 1004900 1005826 R KEGG: reh:H16_B0037 hypothetical protein; hypothetical protein complement(1004900..1005826) Roseiflexus castenholzii DSM 13941 5538233 YP_001430906.1 CDS Rcas_0768 NC_009767.1 1005830 1006498 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mac:MA3170 hypothetical protein; type 12 methyltransferase complement(1005830..1006498) Roseiflexus castenholzii DSM 13941 5538234 YP_001430907.1 CDS Rcas_0769 NC_009767.1 1006495 1007934 R KEGG: cno:NT01CX_1794 hypothetical protein; hypothetical protein complement(1006495..1007934) Roseiflexus castenholzii DSM 13941 5538235 YP_001430908.1 CDS Rcas_0770 NC_009767.1 1008089 1009447 D KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 1008089..1009447 Roseiflexus castenholzii DSM 13941 5538236 YP_001430909.1 CDS Rcas_0772 NC_009767.1 1010446 1011912 R PFAM: polysaccharide biosynthesis protein; KEGG: gfo:GFO_3263 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1010446..1011912) Roseiflexus castenholzii DSM 13941 5538238 YP_001430910.1 CDS Rcas_0774 NC_009767.1 1012393 1013457 R PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: cac:CAC2187 sialic acid synthase; N-acylneuraminate-9-phosphate synthase complement(1012393..1013457) Roseiflexus castenholzii DSM 13941 5538240 YP_001430911.1 CDS Rcas_0775 NC_009767.1 1013454 1014962 R PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl_1522 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1013454..1014962) Roseiflexus castenholzii DSM 13941 5538241 YP_001430912.1 CDS Rcas_0776 NC_009767.1 1015362 1016000 R PFAM: acylneuraminate cytidylyltransferase; KEGG: cth:Cthe_2230 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase complement(1015362..1016000) Roseiflexus castenholzii DSM 13941 5538242 YP_001430913.1 CDS Rcas_0777 NC_009767.1 1016687 1017889 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: pca:Pcar_1141 pyridoxal-phosphate-dependent aminotransferase enzyme; DegT/DnrJ/EryC1/StrS aminotransferase complement(1016687..1017889) Roseiflexus castenholzii DSM 13941 5538243 YP_001430914.1 CDS Rcas_0778 NC_009767.1 1017886 1018863 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mhu:Mhun_3090 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD complement(1017886..1018863) Roseiflexus castenholzii DSM 13941 5538244 YP_001430915.1 CDS Rcas_0779 NC_009767.1 1019225 1019974 R KEGG: rrs:RoseRS_3711 protein of unknown function DUF820; hypothetical protein complement(1019225..1019974) Roseiflexus castenholzii DSM 13941 5538245 YP_001430916.1 CDS Rcas_0781 NC_009767.1 1022096 1023373 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_4428 glutamine--scyllo-inositol transaminase; glutamine--scyllo-inositol transaminase complement(1022096..1023373) Roseiflexus castenholzii DSM 13941 5538247 YP_001430917.1 CDS Rcas_0782 NC_009767.1 1023628 1024056 R PFAM: S23 ribosomal protein; KEGG: rrs:RoseRS_4428 glutamine--scyllo-inositol transaminase; 30S ribosomal protein S23 complement(1023628..1024056) Roseiflexus castenholzii DSM 13941 5538248 YP_001430918.1 CDS Rcas_0783 NC_009767.1 1024352 1024990 R PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_4429 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(1024352..1024990) Roseiflexus castenholzii DSM 13941 5538249 YP_001430919.1 CDS Rcas_0784 NC_009767.1 1025276 1026346 R PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_4430 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(1025276..1026346) Roseiflexus castenholzii DSM 13941 5538250 YP_001430920.1 CDS Rcas_0785 NC_009767.1 1027246 1028283 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_4431 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(1027246..1028283) Roseiflexus castenholzii DSM 13941 5538251 YP_001430921.1 CDS Rcas_0786 NC_009767.1 1028330 1029250 R hypothetical protein complement(1028330..1029250) Roseiflexus castenholzii DSM 13941 5538252 YP_001430922.1 CDS Rcas_0787 NC_009767.1 1029313 1030881 R KEGG: rrs:RoseRS_4433 hypothetical protein; hypothetical protein complement(1029313..1030881) Roseiflexus castenholzii DSM 13941 5538253 YP_001430923.1 CDS Rcas_0788 NC_009767.1 1030954 1032348 R KEGG: rrs:RoseRS_4434 hypothetical protein; hypothetical protein complement(1030954..1032348) Roseiflexus castenholzii DSM 13941 5538254 YP_001430924.1 CDS Rcas_0789 NC_009767.1 1032445 1033239 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4435 methyltransferase type 11; type 11 methyltransferase complement(1032445..1033239) Roseiflexus castenholzii DSM 13941 5538255 YP_001430925.1 CDS Rcas_0790 NC_009767.1 1033242 1034534 R KEGG: rrs:RoseRS_4436 glycosyltransferase-like protein; glycosyltransferase-like protein complement(1033242..1034534) Roseiflexus castenholzii DSM 13941 5538256 YP_001430926.1 CDS Rcas_0791 NC_009767.1 1034531 1035559 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4437 glycosyl transferase, family 2; glycosyl transferase family protein complement(1034531..1035559) Roseiflexus castenholzii DSM 13941 5538257 YP_001430927.1 CDS Rcas_0792 NC_009767.1 1035528 1036658 R PFAM: glycosyl transferase family 2; KEGG: mac:MA2170 glycosyltransferase; glycosyl transferase family protein complement(1035528..1036658) Roseiflexus castenholzii DSM 13941 5538258 YP_001430928.1 CDS Rcas_0793 NC_009767.1 1036655 1038574 R KEGG: rrs:RoseRS_4439 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; asparagine synthase complement(1036655..1038574) Roseiflexus castenholzii DSM 13941 5538259 YP_001430929.1 CDS Rcas_0794 NC_009767.1 1038578 1039636 R hypothetical protein complement(1038578..1039636) Roseiflexus castenholzii DSM 13941 5538260 YP_001430930.1 CDS Rcas_0795 NC_009767.1 1039642 1040505 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4441 protein of unknown function DUF820; hypothetical protein complement(1039642..1040505) Roseiflexus castenholzii DSM 13941 5538261 YP_001430931.1 CDS Rcas_0796 NC_009767.1 1040746 1041531 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4443 protein of unknown function DUF820; hypothetical protein complement(1040746..1041531) Roseiflexus castenholzii DSM 13941 5538262 YP_001430932.1 CDS Rcas_0797 NC_009767.1 1041721 1042485 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4443 protein of unknown function DUF820; hypothetical protein complement(1041721..1042485) Roseiflexus castenholzii DSM 13941 5538263 YP_001430933.1 CDS Rcas_0798 NC_009767.1 1042511 1043701 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4446 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1042511..1043701) Roseiflexus castenholzii DSM 13941 5538264 YP_001430934.1 CDS Rcas_0799 NC_009767.1 1043679 1044650 R hypothetical protein complement(1043679..1044650) Roseiflexus castenholzii DSM 13941 5538265 YP_001430935.1 CDS Rcas_0800 NC_009767.1 1045034 1046134 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4447 glycosyl transferase, family 2; glycosyl transferase family protein complement(1045034..1046134) Roseiflexus castenholzii DSM 13941 5538266 YP_001430936.1 CDS Rcas_0801 NC_009767.1 1046376 1047542 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4448 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1046376..1047542) Roseiflexus castenholzii DSM 13941 5538267 YP_001430937.1 CDS Rcas_0802 NC_009767.1 1047975 1048622 D PFAM: 4-vinyl reductase 4VR; KEGG: rrs:RoseRS_4449 4-vinyl reductase, 4VR; 4-vinyl reductase 4VR 1047975..1048622 Roseiflexus castenholzii DSM 13941 5538268 YP_001430938.1 CDS Rcas_0803 NC_009767.1 1048926 1050326 D KEGG: rrs:RoseRS_4450 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains)-like protein; N-acetylglucosamine-1-phosphate uridyltransferase-like protein 1048926..1050326 Roseiflexus castenholzii DSM 13941 5538269 YP_001430939.1 CDS Rcas_0804 NC_009767.1 1050338 1051282 D PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rrs:RoseRS_4451 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase 1050338..1051282 Roseiflexus castenholzii DSM 13941 5538270 YP_001430940.1 CDS Rcas_0805 NC_009767.1 1051336 1057821 D KEGG: rrs:RoseRS_4452 multi-sensor signal transduction histidine kinase; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 1051336..1057821 Roseiflexus castenholzii DSM 13941 5538271 YP_001430941.1 CDS Rcas_0806 NC_009767.1 1057818 1058657 D PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4453 alpha/beta hydrolase fold; alpha/beta hydrolase 1057818..1058657 Roseiflexus castenholzii DSM 13941 5538272 YP_001430942.1 CDS Rcas_0807 NC_009767.1 1058852 1059892 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_4454 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase 1058852..1059892 Roseiflexus castenholzii DSM 13941 5538273 YP_001430943.1 CDS Rcas_0808 NC_009767.1 1061057 1061605 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mta:Moth_1443 UbiE/COQ5 methyltransferase; type 11 methyltransferase 1061057..1061605 Roseiflexus castenholzii DSM 13941 5538274 YP_001430944.1 CDS Rcas_0809 NC_009767.1 1061940 1064123 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4457 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1061940..1064123 Roseiflexus castenholzii DSM 13941 5538275 YP_001430945.1 CDS Rcas_0810 NC_009767.1 1064666 1065415 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4458 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1064666..1065415 Roseiflexus castenholzii DSM 13941 5538276 YP_001430946.1 CDS Rcas_0811 NC_009767.1 1065450 1066862 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: rrs:RoseRS_4459 iron-sulfur cluster binding protein; iron-sulfur cluster binding protein 1065450..1066862 Roseiflexus castenholzii DSM 13941 5538277 YP_001430947.1 CDS Rcas_0812 NC_009767.1 1066866 1069301 D PFAM: glycoside hydrolase family 57; KEGG: rrs:RoseRS_4460 glycoside hydrolase, family 57; glycoside hydrolase family protein 1066866..1069301 Roseiflexus castenholzii DSM 13941 5538278 YP_001430948.1 CDS Rcas_0813 NC_009767.1 1069540 1070145 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4461 protein of unknown function DUF820; hypothetical protein 1069540..1070145 Roseiflexus castenholzii DSM 13941 5538279 YP_001430949.1 CDS Rcas_0814 NC_009767.1 1070673 1071476 R PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_4462 hypothetical protein; UbiA prenyltransferase complement(1070673..1071476) Roseiflexus castenholzii DSM 13941 5538280 YP_001430950.1 CDS Rcas_0815 NC_009767.1 1071492 1071968 R KEGG: rrs:RoseRS_4463 hypothetical protein; hypothetical protein complement(1071492..1071968) Roseiflexus castenholzii DSM 13941 5538281 YP_001430951.1 CDS Rcas_0816 NC_009767.1 1071973 1072293 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_4464 hypothetical protein; cupin complement(1071973..1072293) Roseiflexus castenholzii DSM 13941 5538282 YP_001430952.1 CDS Rcas_0817 NC_009767.1 1072290 1073138 R PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_4465 methyltransferase type 11; type 11 methyltransferase complement(1072290..1073138) Roseiflexus castenholzii DSM 13941 5538283 YP_001430953.1 CDS Rcas_0818 NC_009767.1 1073323 1073565 R KEGG: rrs:RoseRS_4466 hypothetical protein; hypothetical protein complement(1073323..1073565) Roseiflexus castenholzii DSM 13941 5538284 YP_001430954.1 CDS Rcas_0819 NC_009767.1 1073578 1073808 R KEGG: rrs:RoseRS_4467 hypothetical protein; hypothetical protein complement(1073578..1073808) Roseiflexus castenholzii DSM 13941 5538285 YP_001430955.1 CDS Rcas_0820 NC_009767.1 1073819 1076167 R PFAM: iron permease FTR1; KEGG: rrs:RoseRS_4468 iron permease FTR1; iron permease FTR1 complement(1073819..1076167) Roseiflexus castenholzii DSM 13941 5538286 YP_001430956.1 CDS Rcas_0821 NC_009767.1 1076181 1077263 R KEGG: rrs:RoseRS_4469 hypothetical protein; hypothetical protein complement(1076181..1077263) Roseiflexus castenholzii DSM 13941 5538287 YP_001430957.1 CDS Rcas_0822 NC_009767.1 1077504 1078754 D TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: rrs:RoseRS_4470 kynureninase; kynureninase 1077504..1078754 Roseiflexus castenholzii DSM 13941 5538288 YP_001430958.1 CDS Rcas_0823 NC_009767.1 1078835 1080055 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rrs:RoseRS_4472 cystathionine gamma-synthase; cystathionine gamma-synthase complement(1078835..1080055) Roseiflexus castenholzii DSM 13941 5538289 YP_001430959.1 CDS Rcas_0824 NC_009767.1 1080377 1081684 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4473 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1080377..1081684 Roseiflexus castenholzii DSM 13941 5538290 YP_001430960.1 CDS Rcas_0825 NC_009767.1 1083158 1084540 R PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_4474 PHP C-terminal domain protein; phosphotransferase domain-containing protein complement(1083158..1084540) Roseiflexus castenholzii DSM 13941 5538291 YP_001430961.1 CDS Rcas_0826 NC_009767.1 1084820 1085623 D PFAM: HpcH/HpaI aldolase; KEGG: rrs:RoseRS_4475 HpcH/HpaI aldolase; HpcH/HpaI aldolase 1084820..1085623 Roseiflexus castenholzii DSM 13941 5538292 YP_001430962.1 CDS Rcas_0827 NC_009767.1 1085707 1086393 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_4476 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1085707..1086393 Roseiflexus castenholzii DSM 13941 5538293 YP_001430963.1 CDS Rcas_0828 NC_009767.1 1086412 1087326 R PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rrs:RoseRS_4477 cobalamin (vitamin B12) biosynthesis CbiX protein; cobalamin (vitamin B12) biosynthesis CbiX protein complement(1086412..1087326) Roseiflexus castenholzii DSM 13941 5538294 YP_001430964.1 CDS Rcas_0829 NC_009767.1 1087455 1088735 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4478 major facilitator superfamily MFS_1; major facilitator transporter complement(1087455..1088735) Roseiflexus castenholzii DSM 13941 5538295 YP_001430965.1 CDS Rcas_0830 NC_009767.1 1089724 1090434 R KEGG: rrs:RoseRS_4479 hypothetical protein; hypothetical protein complement(1089724..1090434) Roseiflexus castenholzii DSM 13941 5538296 YP_001430966.1 CDS Rcas_0831 NC_009767.1 1090658 1091092 R KEGG: rrs:RoseRS_4480 hypothetical protein; hypothetical protein complement(1090658..1091092) Roseiflexus castenholzii DSM 13941 5538297 YP_001430967.1 CDS Rcas_0832 NC_009767.1 1091275 1092477 R KEGG: rrs:RoseRS_4481 hypothetical protein; hypothetical protein complement(1091275..1092477) Roseiflexus castenholzii DSM 13941 5538298 YP_001430968.1 CDS Rcas_0833 NC_009767.1 1092597 1094765 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_4482 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(1092597..1094765) Roseiflexus castenholzii DSM 13941 5538299 YP_001430969.1 CDS Rcas_0834 NC_009767.1 1094818 1095498 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4483 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1094818..1095498) Roseiflexus castenholzii DSM 13941 5538300 YP_001430970.1 CDS Rcas_0835 NC_009767.1 1095928 1096521 D KEGG: rrs:RoseRS_4484 hypothetical protein; hypothetical protein 1095928..1096521 Roseiflexus castenholzii DSM 13941 5538301 YP_001430971.1 CDS Rcas_0836 NC_009767.1 1096508 1097116 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_4485 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1096508..1097116 Roseiflexus castenholzii DSM 13941 5538302 YP_001430972.1 CDS Rcas_0837 NC_009767.1 1097129 1097986 D KEGG: rrs:RoseRS_4486 hypothetical protein; hypothetical protein 1097129..1097986 Roseiflexus castenholzii DSM 13941 5538303 YP_001430973.1 CDS Rcas_0838 NC_009767.1 1097988 1098428 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rrs:RoseRS_0295 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator complement(1097988..1098428) Roseiflexus castenholzii DSM 13941 5538304 YP_001430974.1 CDS Rcas_0839 NC_009767.1 1098653 1099795 D PFAM: HNH endonuclease; KEGG: rrs:RoseRS_0345 hypothetical protein; HNH endonuclease 1098653..1099795 Roseiflexus castenholzii DSM 13941 5538305 YP_001430975.1 CDS Rcas_0840 NC_009767.1 1099847 1100647 D KEGG: rrs:RoseRS_0344 histidine triad (HIT) protein; histidine triad (HIT) protein 1099847..1100647 Roseiflexus castenholzii DSM 13941 5538306 YP_001430976.1 CDS Rcas_0841 NC_009767.1 1101513 1102379 R PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: rrs:RoseRS_0342 molybdopterin dehydrogenase, FAD-binding; molybdopterin dehydrogenase FAD-binding complement(1101513..1102379) Roseiflexus castenholzii DSM 13941 5538307 YP_001430977.1 CDS Rcas_0842 NC_009767.1 1102445 1104826 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_0341 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(1102445..1104826) Roseiflexus castenholzii DSM 13941 5538308 YP_001430978.1 CDS Rcas_0843 NC_009767.1 1104908 1105390 R PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rrs:RoseRS_0340 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein complement(1104908..1105390) Roseiflexus castenholzii DSM 13941 5538309 YP_001430979.1 CDS Rcas_0844 NC_009767.1 1105440 1106189 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rrs:RoseRS_0339 carbon monoxide dehydrogenase subunit G; carbon monoxide dehydrogenase subunit G complement(1105440..1106189) Roseiflexus castenholzii DSM 13941 5538310 YP_001430980.1 CDS Rcas_0845 NC_009767.1 1106364 1107890 R KEGG: rrs:RoseRS_0338 response regulator receiver modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; response regulator receiver modulated metal dependent phosphohydrolase complement(1106364..1107890) Roseiflexus castenholzii DSM 13941 5538311 YP_001430981.1 CDS Rcas_0846 NC_009767.1 1108052 1108471 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_0337 response regulator receiver protein; response regulator receiver protein complement(1108052..1108471) Roseiflexus castenholzii DSM 13941 5538312 YP_001430982.1 CDS Rcas_0847 NC_009767.1 1108977 1109834 R PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_0336 PHP C-terminal domain protein; phosphotransferase domain-containing protein complement(1108977..1109834) Roseiflexus castenholzii DSM 13941 5538313 YP_001430983.1 CDS Rcas_0848 NC_009767.1 1109831 1110964 R PFAM: Patatin; KEGG: rrs:RoseRS_0335 patatin; patatin complement(1109831..1110964) Roseiflexus castenholzii DSM 13941 5538314 YP_001430984.1 CDS Rcas_0849 NC_009767.1 1111042 1113195 R KEGG: rrs:RoseRS_0334 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase complement(1111042..1113195) Roseiflexus castenholzii DSM 13941 5538315 YP_001430985.1 CDS Rcas_0850 NC_009767.1 1113468 1113917 D KEGG: rrs:RoseRS_0333 hypothetical protein; hypothetical protein 1113468..1113917 Roseiflexus castenholzii DSM 13941 5538316 YP_001430986.1 CDS Rcas_0852 NC_009767.1 1115488 1115733 R hypothetical protein complement(1115488..1115733) Roseiflexus castenholzii DSM 13941 5538318 YP_001430987.1 CDS Rcas_0853 NC_009767.1 1115948 1116613 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_0332 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase complement(1115948..1116613) Roseiflexus castenholzii DSM 13941 5538319 YP_001430988.1 CDS Rcas_0854 NC_009767.1 1116851 1117651 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: chu:CHU_1562 SAM-dependent methyltransferase; type 11 methyltransferase 1116851..1117651 Roseiflexus castenholzii DSM 13941 5538320 YP_001430989.1 CDS Rcas_0855 NC_009767.1 1118031 1121633 R TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: rrs:RoseRS_0331 chromosome segregation protein SMC; chromosome segregation protein SMC complement(1118031..1121633) Roseiflexus castenholzii DSM 13941 5538321 YP_001430990.1 CDS Rcas_0856 NC_009767.1 1121758 1123365 D protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 1121758..1123365 Roseiflexus castenholzii DSM 13941 5538322 YP_001430991.1 CDS Rcas_0857 NC_009767.1 1123552 1123893 D PFAM: Stage V sporulation protein S; KEGG: rrs:RoseRS_0329 stage V sporulation protein S; stage V sporulation protein S 1123552..1123893 Roseiflexus castenholzii DSM 13941 5538323 YP_001430992.1 CDS Rcas_0858 NC_009767.1 1123980 1124915 R KEGG: rrs:RoseRS_0328 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(1123980..1124915) Roseiflexus castenholzii DSM 13941 5538324 YP_001430993.1 CDS Rcas_0859 NC_009767.1 1125042 1125845 R PFAM: protein of unknown function DUF82; KEGG: rrs:RoseRS_0327 protein of unknown function DUF82; hypothetical protein complement(1125042..1125845) Roseiflexus castenholzii DSM 13941 5538325 YP_001430994.1 CDS Rcas_0860 NC_009767.1 1125842 1126582 R PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_0326 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(1125842..1126582) Roseiflexus castenholzii DSM 13941 5538326 YP_001430995.1 CDS Rcas_0861 NC_009767.1 1126584 1127153 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0325 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen complement(1126584..1127153) Roseiflexus castenholzii DSM 13941 5538327 YP_001430996.1 CDS Rcas_0862 NC_009767.1 1127250 1127948 D KEGG: rrs:RoseRS_0324 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase 1127250..1127948 Roseiflexus castenholzii DSM 13941 5538328 YP_001430997.1 CDS Rcas_0863 NC_009767.1 1127945 1129609 D KEGG: rrs:RoseRS_0323 hypothetical protein; hypothetical protein 1127945..1129609 Roseiflexus castenholzii DSM 13941 5538329 YP_001430998.1 CDS Rcas_0864 NC_009767.1 1129630 1131519 D KEGG: rrs:RoseRS_0322 hypothetical protein; hypothetical protein 1129630..1131519 Roseiflexus castenholzii DSM 13941 5538330 YP_001430999.1 CDS Rcas_0865 NC_009767.1 1131530 1133560 D KEGG: rrs:RoseRS_0321 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; tRNA(Ile)-lysidine synthetase; PFAM: phosphoribosyltransferase; PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; hypoxanthine phosphoribosyltransferase 1131530..1133560 Roseiflexus castenholzii DSM 13941 5538331 YP_001431000.1 CDS Rcas_0866 NC_009767.1 1133584 1134999 D catalyzes the formation of phenol and pyruvate from tyrosine; tyrosine phenol-lyase 1133584..1134999 Roseiflexus castenholzii DSM 13941 5538332 YP_001431001.1 CDS Rcas_0867 NC_009767.1 1135682 1136674 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_4489 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1135682..1136674 Roseiflexus castenholzii DSM 13941 5538333 YP_001431002.1 CDS Rcas_0868 NC_009767.1 1136677 1138197 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_4490 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1136677..1138197 Roseiflexus castenholzii DSM 13941 5538334 YP_001431003.1 CDS Rcas_0869 NC_009767.1 1138506 1139072 R KEGG: rrs:RoseRS_4504 hypothetical protein; hypothetical protein complement(1138506..1139072) Roseiflexus castenholzii DSM 13941 5538335 YP_001431004.1 CDS Rcas_0870 NC_009767.1 1139717 1140277 R KEGG: rrs:RoseRS_4505 hypothetical protein; hypothetical protein complement(1139717..1140277) Roseiflexus castenholzii DSM 13941 5538336 YP_001431005.1 CDS Rcas_0871 NC_009767.1 1140771 1141523 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ppf:Pput_2660 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1140771..1141523 Roseiflexus castenholzii DSM 13941 5538337 YP_001431006.1 CDS Rcas_0872 NC_009767.1 1141723 1142037 D KEGG: rrs:RoseRS_4507 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1141723..1142037 Roseiflexus castenholzii DSM 13941 5538338 YP_001431007.1 CDS Rcas_0873 NC_009767.1 1142098 1143324 D PFAM: protein of unknown function UPF0027; KEGG: rrs:RoseRS_4508 protein of unknown function UPF0027; hypothetical protein 1142098..1143324 Roseiflexus castenholzii DSM 13941 5538339 YP_001431008.1 CDS Rcas_0874 NC_009767.1 1143339 1143767 D hypothetical protein 1143339..1143767 Roseiflexus castenholzii DSM 13941 5538340 YP_001431009.1 CDS Rcas_0875 NC_009767.1 1143785 1144630 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4513 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1143785..1144630 Roseiflexus castenholzii DSM 13941 5538341 YP_001431010.1 CDS Rcas_0876 NC_009767.1 1144775 1145332 D hypothetical protein 1144775..1145332 Roseiflexus castenholzii DSM 13941 5538342 YP_001431011.1 CDS Rcas_0877 NC_009767.1 1145341 1147497 D KEGG: rrs:RoseRS_4515 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; DNA ligase 1145341..1147497 Roseiflexus castenholzii DSM 13941 5538343 YP_001431012.1 CDS Rcas_0878 NC_009767.1 1147512 1148465 D PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4516 alpha/beta hydrolase fold; alpha/beta hydrolase 1147512..1148465 Roseiflexus castenholzii DSM 13941 5538344 YP_001431013.1 CDS Rcas_0879 NC_009767.1 1149889 1150290 R KEGG: dvu:DVU2021 hypothetical protein; hypothetical protein complement(1149889..1150290) Roseiflexus castenholzii DSM 13941 5538345 YP_001431014.1 CDS Rcas_0880 NC_009767.1 1151267 1152154 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_0236 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1151267..1152154) Roseiflexus castenholzii DSM 13941 5538346 YP_001431015.1 CDS Rcas_0881 NC_009767.1 1152602 1155358 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1152602..1155358 Roseiflexus castenholzii DSM 13941 5538347 YP_001431016.1 CDS Rcas_0882 NC_009767.1 1155503 1155973 D PFAM: DNA polymerase beta domain protein region; KEGG: gme:Gmet_3257 DNA polymerase, beta-like region; DNA polymerase subunit beta 1155503..1155973 Roseiflexus castenholzii DSM 13941 5538348 YP_001431017.1 CDS Rcas_0883 NC_009767.1 1155994 1156287 D PFAM: protein of unknown function DUF86; KEGG: gme:Gmet_3258 protein of unknown function DUF86; hypothetical protein 1155994..1156287 Roseiflexus castenholzii DSM 13941 5538349 YP_001431018.1 CDS Rcas_0884 NC_009767.1 1156617 1157501 R KEGG: rrs:RoseRS_0233 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(1156617..1157501) Roseiflexus castenholzii DSM 13941 5538350 YP_001431019.1 CDS asnC NC_009767.1 1157827 1159149 D catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1157827..1159149 Roseiflexus castenholzii DSM 13941 5538351 YP_001431020.1 CDS Rcas_0886 NC_009767.1 1159159 1161687 D PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0231 GAF sensor hybrid histidine kinase; GAF sensor hybrid histidine kinase 1159159..1161687 Roseiflexus castenholzii DSM 13941 5538352 YP_001431021.1 CDS Rcas_0887 NC_009767.1 1161693 1162121 R KEGG: rrs:RoseRS_0230 hypothetical protein; hypothetical protein complement(1161693..1162121) Roseiflexus castenholzii DSM 13941 5538353 YP_001431022.1 CDS Rcas_0888 NC_009767.1 1162635 1163696 R PFAM: beta-lactamase; KEGG: rrs:RoseRS_0229 beta-lactamase; beta-lactamase complement(1162635..1163696) Roseiflexus castenholzii DSM 13941 5538354 YP_001431023.1 CDS Rcas_0889 NC_009767.1 1163700 1165382 R PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0228 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase complement(1163700..1165382) Roseiflexus castenholzii DSM 13941 5538355 YP_001431024.1 CDS Rcas_0890 NC_009767.1 1165394 1165840 R KEGG: rrs:RoseRS_0227 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein complement(1165394..1165840) Roseiflexus castenholzii DSM 13941 5538356 YP_001431025.1 CDS Rcas_0891 NC_009767.1 1165846 1166661 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_0226 alpha/beta hydrolase fold; alpha/beta hydrolase complement(1165846..1166661) Roseiflexus castenholzii DSM 13941 5538357 YP_001431026.1 CDS Rcas_0892 NC_009767.1 1166841 1167659 R PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_0225 alpha/beta hydrolase fold; alpha/beta hydrolase complement(1166841..1167659) Roseiflexus castenholzii DSM 13941 5538358 YP_001431027.1 CDS Rcas_0893 NC_009767.1 1167860 1169995 R PFAM: Rhodanese domain protein; Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rrs:RoseRS_4186 sulphate transporter; sulfate transporter complement(1167860..1169995) Roseiflexus castenholzii DSM 13941 5538359 YP_001431028.1 CDS Rcas_0895 NC_009767.1 1171550 1172374 R KEGG: rrs:RoseRS_4183 hypothetical protein; hypothetical protein complement(1171550..1172374) Roseiflexus castenholzii DSM 13941 5538361 YP_001431029.1 CDS Rcas_0896 NC_009767.1 1172581 1173243 D PFAM: PspA/IM30 family protein; KEGG: rrs:RoseRS_4182 phage shock protein A, PspA; phage shock protein PspA 1172581..1173243 Roseiflexus castenholzii DSM 13941 5538362 YP_001431030.1 CDS Rcas_0897 NC_009767.1 1173744 1175912 R KEGG: rrs:RoseRS_4181 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; alpha-glucan phosphorylase complement(1173744..1175912) Roseiflexus castenholzii DSM 13941 5538363 YP_001431031.1 CDS Rcas_0898 NC_009767.1 1176035 1176859 R KEGG: rrs:RoseRS_4180 hypothetical protein; hypothetical protein complement(1176035..1176859) Roseiflexus castenholzii DSM 13941 5538364 YP_001431032.1 CDS Rcas_0899 NC_009767.1 1176925 1178487 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_4179 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(1176925..1178487) Roseiflexus castenholzii DSM 13941 5538365 YP_001431033.1 CDS Rcas_0900 NC_009767.1 1178986 1179477 R KEGG: rrs:RoseRS_4178 hypothetical protein; hypothetical protein complement(1178986..1179477) Roseiflexus castenholzii DSM 13941 5538366 YP_001431034.1 CDS Rcas_0901 NC_009767.1 1179506 1181878 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: csc:Csac_0586 glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 complement(1179506..1181878) Roseiflexus castenholzii DSM 13941 5538367 YP_001431035.1 CDS Rcas_0902 NC_009767.1 1181871 1182878 R KEGG: tpt:Tpet_0489 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1181871..1182878) Roseiflexus castenholzii DSM 13941 5538368 YP_001431036.1 CDS Rcas_0903 NC_009767.1 1182862 1183869 R KEGG: tma:TM0074 oligopeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(1182862..1183869) Roseiflexus castenholzii DSM 13941 5538369 YP_001431037.1 CDS Rcas_0904 NC_009767.1 1183877 1184728 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0851 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1183877..1184728) Roseiflexus castenholzii DSM 13941 5538370 YP_001431038.1 CDS Rcas_0905 NC_009767.1 1184742 1185746 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0852 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1184742..1185746) Roseiflexus castenholzii DSM 13941 5538371 YP_001431039.1 CDS Rcas_0906 NC_009767.1 1185887 1187866 R PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM0071 oligopeptide transport system substrate-binding protein; extracellular solute-binding protein complement(1185887..1187866) Roseiflexus castenholzii DSM 13941 5538372 YP_001431040.1 CDS Rcas_0907 NC_009767.1 1187902 1188927 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cmi:CMM_0295 transcriptional regulator, LacI family; LacI family transcriptional regulator complement(1187902..1188927) Roseiflexus castenholzii DSM 13941 5538373 YP_001431041.1 CDS Rcas_0908 NC_009767.1 1191072 1191926 R KEGG: rrs:RoseRS_4177 hypothetical protein; hypothetical protein complement(1191072..1191926) Roseiflexus castenholzii DSM 13941 5538374 YP_001431042.1 CDS Rcas_0909 NC_009767.1 1192148 1193587 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4176 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1192148..1193587 Roseiflexus castenholzii DSM 13941 5538375 YP_001431043.1 CDS Rcas_0910 NC_009767.1 1193604 1194821 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_4175 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 1193604..1194821 Roseiflexus castenholzii DSM 13941 5538376 YP_001431044.1 CDS Rcas_0911 NC_009767.1 1195114 1196340 D KEGG: rrs:RoseRS_4174 acyl-CoA transferase/carnitine dehydratase-like protein; acyl-CoA transferase 1195114..1196340 Roseiflexus castenholzii DSM 13941 5538377 YP_001431045.1 CDS Rcas_0912 NC_009767.1 1196350 1197393 D PFAM: HpcH/HpaI aldolase; KEGG: rrs:RoseRS_4173 HpcH/HpaI aldolase; HpcH/HpaI aldolase 1196350..1197393 Roseiflexus castenholzii DSM 13941 5538378 YP_001431046.1 CDS Rcas_0913 NC_009767.1 1197409 1198467 D PFAM: MaoC domain protein dehydratase; KEGG: rrs:RoseRS_4172 MaoC domain protein dehydratase; dehydratase 1197409..1198467 Roseiflexus castenholzii DSM 13941 5538379 YP_001431047.1 CDS Rcas_0914 NC_009767.1 1198488 1199297 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_4259 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(1198488..1199297) Roseiflexus castenholzii DSM 13941 5538380 YP_001431048.1 CDS Rcas_0915 NC_009767.1 1199379 1199699 D hypothetical protein 1199379..1199699 Roseiflexus castenholzii DSM 13941 5538381 YP_001431049.1 CDS Rcas_0916 NC_009767.1 1199934 1201121 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1199934..1201121 Roseiflexus castenholzii DSM 13941 5538382 YP_001431050.1 CDS Rcas_0917 NC_009767.1 1201165 1202169 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3655 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1201165..1202169 Roseiflexus castenholzii DSM 13941 5538383 YP_001431051.1 CDS Rcas_0918 NC_009767.1 1202520 1203347 R PFAM: YceI family protein; KEGG: rrs:RoseRS_3479 YceI family protein; YceI family protein complement(1202520..1203347) Roseiflexus castenholzii DSM 13941 5538384 YP_001431052.1 CDS Rcas_0919 NC_009767.1 1203566 1206310 D PFAM: glycoside hydrolase family 3 domain protein; PA14 domain protein; SMART: PA14-related domain protein; KEGG: rrs:RoseRS_3480 glycoside hydrolase, family 3 domain protein; glycoside hydrolase family 3 1203566..1206310 Roseiflexus castenholzii DSM 13941 5538385 YP_001431053.1 CDS Rcas_0920 NC_009767.1 1206753 1209368 R PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_4294 ATPase AAA-2 domain protein; ATPase complement(1206753..1209368) Roseiflexus castenholzii DSM 13941 5538386 YP_001431054.1 CDS Rcas_0921 NC_009767.1 1209719 1212046 D PFAM: alpha-L-rhamnosidase; KEGG: sus:Acid_3742 alpha-L-rhamnosidase; alpha-L-rhamnosidase 1209719..1212046 Roseiflexus castenholzii DSM 13941 5538387 YP_001431055.1 CDS Rcas_0923 NC_009767.1 1214353 1215777 R KEGG: rrs:RoseRS_4188 hypothetical protein; hypothetical protein complement(1214353..1215777) Roseiflexus castenholzii DSM 13941 5538389 YP_001431056.1 CDS glpX NC_009767.1 1215774 1216775 R type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II complement(1215774..1216775) Roseiflexus castenholzii DSM 13941 5538390 YP_001431057.1 CDS Rcas_0925 NC_009767.1 1216974 1218428 D PFAM: fumarate lyase; KEGG: rrs:RoseRS_3341 fumarate lyase; fumarate lyase 1216974..1218428 Roseiflexus castenholzii DSM 13941 5538391 YP_001431058.1 CDS Rcas_0926 NC_009767.1 1220147 1221202 D KEGG: rrs:RoseRS_3342 ATPase involved in chromosome partitioning-like protein; chromosome partitioning ATPase 1220147..1221202 Roseiflexus castenholzii DSM 13941 5538392 YP_001431059.1 CDS Rcas_0927 NC_009767.1 1221497 1222978 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4293 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(1221497..1222978) Roseiflexus castenholzii DSM 13941 5538393 YP_001431060.1 CDS Rcas_0928 NC_009767.1 1223084 1224442 D KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 1223084..1224442 Roseiflexus castenholzii DSM 13941 5538394 YP_001431061.1 CDS Rcas_0929 NC_009767.1 1226041 1234671 D PFAM: Cna B domain protein; KEGG: rrs:RoseRS_4292 Cna B domain protein; Cna B domain-containing protein 1226041..1234671 Roseiflexus castenholzii DSM 13941 5538395 YP_001431062.1 CDS Rcas_0930 NC_009767.1 1234810 1235592 D KEGG: rrs:RoseRS_4291 hypothetical protein; hypothetical protein 1234810..1235592 Roseiflexus castenholzii DSM 13941 5538396 YP_001431063.1 CDS Rcas_0931 NC_009767.1 1235589 1237406 D PFAM: TrkA-N domain protein; KEGG: rrs:RoseRS_4290 TrkA-N domain protein; TrkA domain-containing protein 1235589..1237406 Roseiflexus castenholzii DSM 13941 5538397 YP_001431064.1 CDS Rcas_0932 NC_009767.1 1237473 1238309 R PFAM: ATP-NAD/AcoX kinase; KEGG: rrs:RoseRS_4289 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase complement(1237473..1238309) Roseiflexus castenholzii DSM 13941 5538398 YP_001431065.1 CDS Rcas_0933 NC_009767.1 1238306 1239244 R PFAM: metalloenzyme domain protein; KEGG: rrs:RoseRS_4288 metalloenzyme domain protein; metalloenzyme domain-containing protein complement(1238306..1239244) Roseiflexus castenholzii DSM 13941 5538399 YP_001431066.1 CDS Rcas_0934 NC_009767.1 1239605 1240771 D PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_4287 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 1239605..1240771 Roseiflexus castenholzii DSM 13941 5538400 YP_001431067.1 CDS Rcas_0935 NC_009767.1 1241138 1242037 R similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase complement(1241138..1242037) Roseiflexus castenholzii DSM 13941 5538401 YP_001431068.1 CDS Rcas_0936 NC_009767.1 1242287 1243495 D PFAM: GHMP kinase domain protein; KEGG: rrs:RoseRS_4285 GHMP kinase, C terminal domain protein; GHMP kinase domain-containing protein 1242287..1243495 Roseiflexus castenholzii DSM 13941 5538402 YP_001431069.1 CDS Rcas_0937 NC_009767.1 1243854 1245008 D PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_4282 peptidase C60, sortase A and B; peptidase C60 sortase A and B 1243854..1245008 Roseiflexus castenholzii DSM 13941 5538403 YP_001431070.1 CDS Rcas_0938 NC_009767.1 1245016 1245540 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4281 protein of unknown function DUF820; hypothetical protein complement(1245016..1245540) Roseiflexus castenholzii DSM 13941 5538404 YP_001431071.1 CDS Rcas_0939 NC_009767.1 1245558 1246574 R PFAM: beta-lactamase; KEGG: rrs:RoseRS_4280 beta-lactamase; beta-lactamase complement(1245558..1246574) Roseiflexus castenholzii DSM 13941 5538405 YP_001431072.1 CDS Rcas_0940 NC_009767.1 1246637 1247032 D hypothetical protein 1246637..1247032 Roseiflexus castenholzii DSM 13941 5538406 YP_001431073.1 CDS Rcas_0941 NC_009767.1 1247195 1248058 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_4278 methyltransferase type 11; type 11 methyltransferase 1247195..1248058 Roseiflexus castenholzii DSM 13941 5538407 YP_001431074.1 CDS Rcas_0942 NC_009767.1 1248121 1248492 D KEGG: rrs:RoseRS_4277 Ig domain protein, group 1 domain protein; hypothetical protein 1248121..1248492 Roseiflexus castenholzii DSM 13941 5538408 YP_001431075.1 CDS Rcas_0943 NC_009767.1 1248772 1249764 R PFAM: protein of unknown function DUF368; KEGG: rrs:RoseRS_3873 protein of unknown function DUF368; hypothetical protein complement(1248772..1249764) Roseiflexus castenholzii DSM 13941 5538409 YP_001431076.1 CDS Rcas_0944 NC_009767.1 1250240 1251592 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_3701 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase complement(1250240..1251592) Roseiflexus castenholzii DSM 13941 5538410 YP_001431077.1 CDS Rcas_0945 NC_009767.1 1251958 1252731 D KEGG: rrs:RoseRS_3700 histidinol-phosphate phosphatase, TIGRFAM: histidinol-phosphate phosphatase, PFAM: inositol monophosphatase; histidinol-phosphate phosphatase 1251958..1252731 Roseiflexus castenholzii DSM 13941 5538411 YP_001431078.1 CDS Rcas_0946 NC_009767.1 1253423 1254673 D TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_3699 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1253423..1254673 Roseiflexus castenholzii DSM 13941 5538412 YP_001431079.1 CDS Rcas_0947 NC_009767.1 1254682 1255929 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_3698 nucleotidyl transferase; nucleotidyl transferase 1254682..1255929 Roseiflexus castenholzii DSM 13941 5538413 YP_001431080.1 CDS Rcas_0948 NC_009767.1 1255948 1256472 D KEGG: rrs:RoseRS_3697 membrane-flanked domain; hypothetical protein 1255948..1256472 Roseiflexus castenholzii DSM 13941 5538414 YP_001431081.1 CDS Rcas_0949 NC_009767.1 1256474 1257379 R PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3696 PfkB domain protein; ribokinase-like domain-containing protein complement(1256474..1257379) Roseiflexus castenholzii DSM 13941 5538415 YP_001431082.1 CDS Rcas_0950 NC_009767.1 1257441 1258985 D PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3695 carboxyl transferase; carboxyl transferase 1257441..1258985 Roseiflexus castenholzii DSM 13941 5538416 YP_001431083.1 CDS Rcas_0951 NC_009767.1 1258996 1259340 D PFAM: sodium pump decarboxylase gamma subunit; KEGG: rrs:RoseRS_3694 hypothetical protein; sodium pump decarboxylase subunit gamma 1258996..1259340 Roseiflexus castenholzii DSM 13941 5538417 YP_001431084.1 CDS Rcas_0952 NC_009767.1 1259337 1259792 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rrs:RoseRS_3693 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 1259337..1259792 Roseiflexus castenholzii DSM 13941 5538418 YP_001431085.1 CDS Rcas_0953 NC_009767.1 1260493 1261623 D KEGG: rrs:RoseRS_3692 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 1260493..1261623 Roseiflexus castenholzii DSM 13941 5538419 YP_001431086.1 CDS Rcas_0955 NC_009767.1 1262823 1263137 D KEGG: mta:Moth_1571 hypothetical protein; hypothetical protein 1262823..1263137 Roseiflexus castenholzii DSM 13941 5538421 YP_001431087.1 CDS Rcas_0956 NC_009767.1 1263134 1263376 D hypothetical protein 1263134..1263376 Roseiflexus castenholzii DSM 13941 5538422 YP_001431088.1 CDS Rcas_0957 NC_009767.1 1263610 1264467 D hypothetical protein 1263610..1264467 Roseiflexus castenholzii DSM 13941 5538423 YP_001431089.1 CDS Rcas_0958 NC_009767.1 1264470 1265696 D KEGG: rrs:RoseRS_3691 hypothetical protein; hypothetical protein 1264470..1265696 Roseiflexus castenholzii DSM 13941 5538424 YP_001431090.1 CDS Rcas_0959 NC_009767.1 1265778 1267193 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3486 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1265778..1267193) Roseiflexus castenholzii DSM 13941 5538425 YP_001431091.1 CDS Rcas_0960 NC_009767.1 1267196 1267906 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3485 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1267196..1267906) Roseiflexus castenholzii DSM 13941 5538426 YP_001431092.1 CDS Rcas_0961 NC_009767.1 1267903 1268283 R KEGG: rrs:RoseRS_3484 hypothetical protein; hypothetical protein complement(1267903..1268283) Roseiflexus castenholzii DSM 13941 5538427 YP_001431093.1 CDS Rcas_0962 NC_009767.1 1268280 1268807 R KEGG: rrs:RoseRS_3483 hypothetical protein; hypothetical protein complement(1268280..1268807) Roseiflexus castenholzii DSM 13941 5538428 YP_001431094.1 CDS Rcas_0963 NC_009767.1 1269125 1269739 R PFAM: protein of unknown function DUF461; KEGG: rrs:RoseRS_3482 protein of unknown function DUF461; hypothetical protein complement(1269125..1269739) Roseiflexus castenholzii DSM 13941 5538429 YP_001431095.1 CDS Rcas_0964 NC_009767.1 1270075 1270506 R KEGG: rrs:RoseRS_3481 hypothetical protein; hypothetical protein complement(1270075..1270506) Roseiflexus castenholzii DSM 13941 5538430 YP_001431096.1 CDS Rcas_0965 NC_009767.1 1270574 1270987 D KEGG: rrs:RoseRS_3513 hypothetical protein; hypothetical protein 1270574..1270987 Roseiflexus castenholzii DSM 13941 5538431 YP_001431097.1 CDS Rcas_0966 NC_009767.1 1271116 1271967 D catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 1271116..1271967 Roseiflexus castenholzii DSM 13941 5538432 YP_001431098.1 CDS Rcas_0967 NC_009767.1 1272398 1273132 D KEGG: msm:MSMEG_3463 esterase; esterase 1272398..1273132 Roseiflexus castenholzii DSM 13941 5538433 YP_001431099.1 CDS Rcas_0969 NC_009767.1 1273560 1274210 D PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_3834 transcriptional regulator, TetR family; TetR family transcriptional regulator 1273560..1274210 Roseiflexus castenholzii DSM 13941 5538435 YP_001431100.1 CDS Rcas_0970 NC_009767.1 1274215 1275066 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3832 ABC transporter related; ABC transporter-like protein 1274215..1275066 Roseiflexus castenholzii DSM 13941 5538436 YP_001431101.1 CDS Rcas_0971 NC_009767.1 1275063 1275773 D PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3831 ABC-2 type transporter; ABC-2 type transporter 1275063..1275773 Roseiflexus castenholzii DSM 13941 5538437 YP_001431102.1 CDS Rcas_0972 NC_009767.1 1275770 1276510 D KEGG: rrs:RoseRS_3830 hypothetical protein; hypothetical protein 1275770..1276510 Roseiflexus castenholzii DSM 13941 5538438 YP_001431103.1 CDS Rcas_0973 NC_009767.1 1276516 1277103 D KEGG: rrs:RoseRS_3829 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1276516..1277103 Roseiflexus castenholzii DSM 13941 5538439 YP_001431104.1 CDS Rcas_0974 NC_009767.1 1277179 1278204 D TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: rrs:RoseRS_3828 galactose-1-phosphate uridylyltransferase; galactose-1-phosphate uridylyltransferase 1277179..1278204 Roseiflexus castenholzii DSM 13941 5538440 YP_001431105.1 CDS Rcas_0975 NC_009767.1 1278191 1279798 D PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3827 propionyl-CoA carboxylase; propionyl-CoA carboxylase 1278191..1279798 Roseiflexus castenholzii DSM 13941 5538441 YP_001431106.1 CDS Rcas_0976 NC_009767.1 1279809 1280471 D KEGG: rrs:RoseRS_3826 hypothetical protein; hypothetical protein 1279809..1280471 Roseiflexus castenholzii DSM 13941 5538442 YP_001431107.1 CDS Rcas_0977 NC_009767.1 1280471 1281241 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_3825 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1280471..1281241 Roseiflexus castenholzii DSM 13941 5538443 YP_001431108.1 CDS Rcas_0978 NC_009767.1 1281372 1282226 R KEGG: bcl:ABC1967 hypothetical protein; hypothetical protein complement(1281372..1282226) Roseiflexus castenholzii DSM 13941 5538444 YP_001431109.1 CDS Rcas_0979 NC_009767.1 1282446 1284425 R PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_0434 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding complement(1282446..1284425) Roseiflexus castenholzii DSM 13941 5538445 YP_001431110.1 CDS Rcas_0980 NC_009767.1 1285128 1285859 R KEGG: rrs:RoseRS_0432 hypothetical protein; hypothetical protein complement(1285128..1285859) Roseiflexus castenholzii DSM 13941 5538446 YP_001431111.1 CDS Rcas_0981 NC_009767.1 1285991 1287325 D TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; KEGG: rrs:RoseRS_0431 hydroxymethylglutaryl-CoA reductase, degradative; hydroxymethylglutaryl-CoA reductase, degradative 1285991..1287325 Roseiflexus castenholzii DSM 13941 5538447 YP_001431112.1 CDS Rcas_0982 NC_009767.1 1287472 1288518 D TIGRFAM: hydroxymethylglutaryl-CoA synthase; PFAM: Hydroxymethylglutaryl-coenzyme A synthase domain; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: rrs:RoseRS_0430 hydroxymethylglutaryl-CoA synthase; hypothetical protein 1287472..1288518 Roseiflexus castenholzii DSM 13941 5538448 YP_001431113.1 CDS Rcas_0983 NC_009767.1 1288523 1289677 D KEGG: rrs:RoseRS_0429 acetyl-CoA acetyltransferase-like protein; acetyl-CoA acetyltransferase-like protein 1288523..1289677 Roseiflexus castenholzii DSM 13941 5538449 YP_001431114.1 CDS Rcas_0984 NC_009767.1 1289693 1290091 D PFAM: protein of unknown function DUF35; KEGG: rrs:RoseRS_0428 protein of unknown function DUF35; hypothetical protein 1289693..1290091 Roseiflexus castenholzii DSM 13941 5538450 YP_001431115.1 CDS Rcas_0988 NC_009767.1 1291498 1292055 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3810 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(1291498..1292055) Roseiflexus castenholzii DSM 13941 5538454 YP_001431116.1 CDS Rcas_0989 NC_009767.1 1292200 1292856 D KEGG: rrs:RoseRS_3811 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1292200..1292856 Roseiflexus castenholzii DSM 13941 5538455 YP_001431117.1 CDS Rcas_0990 NC_009767.1 1292873 1293547 D PFAM: peptidase M50; KEGG: rrs:RoseRS_3812 peptidase M50; peptidase M50 1292873..1293547 Roseiflexus castenholzii DSM 13941 5538456 YP_001431118.1 CDS tpiA NC_009767.1 1293558 1294322 D Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1293558..1294322 Roseiflexus castenholzii DSM 13941 5538457 YP_001431119.1 CDS Rcas_0993 NC_009767.1 1295421 1295804 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_3814 response regulator receiver protein; response regulator receiver protein complement(1295421..1295804) Roseiflexus castenholzii DSM 13941 5538459 YP_001431120.1 CDS Rcas_0994 NC_009767.1 1296347 1298707 D KEGG: rrs:RoseRS_3815 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1296347..1298707 Roseiflexus castenholzii DSM 13941 5538460 YP_001431121.1 CDS Rcas_0995 NC_009767.1 1298947 1301325 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_3816 diguanylate cyclase with PAS/PAC sensor; GAF sensor-containing diguanylate cyclase complement(1298947..1301325) Roseiflexus castenholzii DSM 13941 5538461 YP_001431122.1 CDS Rcas_0996 NC_009767.1 1301442 1302632 R KEGG: rrs:RoseRS_3817 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1301442..1302632) Roseiflexus castenholzii DSM 13941 5538462 YP_001431123.1 CDS Rcas_0997 NC_009767.1 1302663 1303355 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3818 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1302663..1303355) Roseiflexus castenholzii DSM 13941 5538463 YP_001431124.1 CDS Rcas_0998 NC_009767.1 1303441 1304616 R TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_3819 galactokinase; galactokinase complement(1303441..1304616) Roseiflexus castenholzii DSM 13941 5538464 YP_001431125.1 CDS Rcas_0999 NC_009767.1 1304888 1307128 D KEGG: rrs:RoseRS_3820 hypothetical protein; hypothetical protein 1304888..1307128 Roseiflexus castenholzii DSM 13941 5538465 YP_001431126.1 CDS Rcas_1000 NC_009767.1 1307187 1310051 D KEGG: rrs:RoseRS_3821 hypothetical protein; hypothetical protein 1307187..1310051 Roseiflexus castenholzii DSM 13941 5538466 YP_001431127.1 CDS Rcas_1001 NC_009767.1 1310118 1310993 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_3822 alpha/beta hydrolase fold; alpha/beta hydrolase complement(1310118..1310993) Roseiflexus castenholzii DSM 13941 5538467 YP_001431128.1 CDS Rcas_1002 NC_009767.1 1311104 1311949 D PFAM: NERD domain protein; DNA topoisomerase type IA zn finger domain protein; KEGG: tte:TTE0673 hypothetical protein; NERD domain-containing protein 1311104..1311949 Roseiflexus castenholzii DSM 13941 5538468 YP_001431129.1 CDS Rcas_1003 NC_009767.1 1312488 1314092 R KEGG: rrs:RoseRS_0437 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; L-aspartate oxidase complement(1312488..1314092) Roseiflexus castenholzii DSM 13941 5538469 YP_001431130.1 CDS Rcas_1004 NC_009767.1 1314333 1315364 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(1314333..1315364) Roseiflexus castenholzii DSM 13941 5538470 YP_001431131.1 CDS Rcas_1005 NC_009767.1 1315364 1316233 R KEGG: rrs:RoseRS_0439 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(1315364..1316233) Roseiflexus castenholzii DSM 13941 5538471 YP_001431132.1 CDS Rcas_1006 NC_009767.1 1316926 1317186 D hypothetical protein 1316926..1317186 Roseiflexus castenholzii DSM 13941 5538472 YP_001431133.1 CDS Rcas_1007 NC_009767.1 1317209 1317421 R PFAM: YcfA family protein; hypothetical protein complement(1317209..1317421) Roseiflexus castenholzii DSM 13941 5538473 YP_001431134.1 CDS Rcas_1008 NC_009767.1 1317418 1317678 R PFAM: protein of unknown function UPF0150; KEGG: rrs:RoseRS_1435 protein of unknown function UPF0150; hypothetical protein complement(1317418..1317678) Roseiflexus castenholzii DSM 13941 5538474 YP_001431135.1 CDS Rcas_1009 NC_009767.1 1319117 1320172 D KEGG: rrs:RoseRS_0652 regulatory protein, DeoR; regulatory protein, DeoR 1319117..1320172 Roseiflexus castenholzii DSM 13941 5538475 YP_001431136.1 CDS Rcas_1010 NC_009767.1 1320175 1322754 D KEGG: afu:AF0071 ATP-dependent RNA helicase, TIGRFAM: CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 1320175..1322754 Roseiflexus castenholzii DSM 13941 5538476 YP_001431137.1 CDS Rcas_1011 NC_009767.1 1322754 1324499 D hypothetical protein 1322754..1324499 Roseiflexus castenholzii DSM 13941 5538477 YP_001431138.1 CDS Rcas_1012 NC_009767.1 1324532 1325479 D TIGRFAM: CRISPR-associated autoregulator DevR family; PFAM: CRISPR-associated regulatory Csa2 family protein; KEGG: afu:AF0068 hypothetical protein; CRISPR-associated autoregulator DevR family protein 1324532..1325479 Roseiflexus castenholzii DSM 13941 5538478 YP_001431139.1 CDS Rcas_1013 NC_009767.1 1325482 1326177 D KEGG: afu:AF0067 A. fulgidus predicted coding region AF0067; hypothetical protein 1325482..1326177 Roseiflexus castenholzii DSM 13941 5538479 YP_001431140.1 CDS Rcas_1014 NC_009767.1 1326339 1326665 R hypothetical protein complement(1326339..1326665) Roseiflexus castenholzii DSM 13941 5538480 YP_001431141.1 CDS Rcas_1015 NC_009767.1 1326646 1326951 R hypothetical protein complement(1326646..1326951) Roseiflexus castenholzii DSM 13941 5538481 YP_001431142.1 CDS Rcas_1016 NC_009767.1 1326971 1327324 D hypothetical protein 1326971..1327324 Roseiflexus castenholzii DSM 13941 5538482 YP_001431143.1 CDS Rcas_1020 NC_009767.1 1330245 1330565 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3041 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(1330245..1330565) Roseiflexus castenholzii DSM 13941 5538486 YP_001431144.1 CDS Rcas_1022 NC_009767.1 1331690 1332994 R PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3432 PucC protein; PUCC protein complement(1331690..1332994) Roseiflexus castenholzii DSM 13941 5538488 YP_001431145.1 CDS Rcas_1023 NC_009767.1 1333202 1333486 D KEGG: rrs:RoseRS_3431 hypothetical protein; hypothetical protein 1333202..1333486 Roseiflexus castenholzii DSM 13941 5538489 YP_001431146.1 CDS Rcas_1024 NC_009767.1 1333533 1336034 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_3430 DEAD/H associated domain protein; DEAD/DEAH box helicase complement(1333533..1336034) Roseiflexus castenholzii DSM 13941 5538490 YP_001431147.1 CDS Rcas_1025 NC_009767.1 1336424 1337290 R KEGG: rrs:RoseRS_4328 hypothetical protein; hypothetical protein complement(1336424..1337290) Roseiflexus castenholzii DSM 13941 5538491 YP_001431148.1 CDS Rcas_1026 NC_009767.1 1338035 1339258 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_0398 major facilitator superfamily MFS_1; major facilitator transporter 1338035..1339258 Roseiflexus castenholzii DSM 13941 5538492 YP_001431149.1 CDS Rcas_1027 NC_009767.1 1339704 1341098 R KEGG: rrs:RoseRS_0399 hypothetical protein; hypothetical protein complement(1339704..1341098) Roseiflexus castenholzii DSM 13941 5538493 YP_001431150.1 CDS Rcas_1028 NC_009767.1 1341280 1342032 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0400 methyltransferase type 11; type 11 methyltransferase 1341280..1342032 Roseiflexus castenholzii DSM 13941 5538494 YP_001431151.1 CDS Rcas_1029 NC_009767.1 1342052 1343134 D PFAM: glycosyl transferase family 2; KEGG: tfu:Tfu_2541 glycosyl transferase; glycosyl transferase family protein 1342052..1343134 Roseiflexus castenholzii DSM 13941 5538495 YP_001431152.1 CDS Rcas_1030 NC_009767.1 1343131 1344615 D PFAM: sugar transferase; KEGG: rrs:RoseRS_0402 sugar transferase; sugar transferase 1343131..1344615 Roseiflexus castenholzii DSM 13941 5538496 YP_001431153.1 CDS Rcas_1031 NC_009767.1 1344739 1347420 D KEGG: rrs:RoseRS_0403 hypothetical protein; hypothetical protein 1344739..1347420 Roseiflexus castenholzii DSM 13941 5538497 YP_001431154.1 CDS Rcas_1032 NC_009767.1 1347708 1349060 R PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_0404 aminotransferase class-III; class III aminotransferase complement(1347708..1349060) Roseiflexus castenholzii DSM 13941 5538498 YP_001431155.1 CDS Rcas_1033 NC_009767.1 1349342 1349950 D KEGG: rrs:RoseRS_0405 hypothetical protein; hypothetical protein 1349342..1349950 Roseiflexus castenholzii DSM 13941 5538499 YP_001431156.1 CDS Rcas_1034 NC_009767.1 1350031 1351377 R TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_0406 diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(1350031..1351377) Roseiflexus castenholzii DSM 13941 5538500 YP_001431157.1 CDS Rcas_1035 NC_009767.1 1351603 1353054 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(1351603..1353054) Roseiflexus castenholzii DSM 13941 5538501 YP_001431158.1 CDS Rcas_1036 NC_009767.1 1353514 1354020 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0408 redoxin domain protein; redoxin domain-containing protein complement(1353514..1354020) Roseiflexus castenholzii DSM 13941 5538502 YP_001431159.1 CDS Rcas_1037 NC_009767.1 1354244 1355698 D TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_0409 PAS/PAC sensor protein; PAS/PAC sensor protein 1354244..1355698 Roseiflexus castenholzii DSM 13941 5538503 YP_001431160.1 CDS Rcas_1040 NC_009767.1 1357039 1357689 D PFAM: regulatory protein LuxR; KEGG: aav:Aave_4229 two component transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1357039..1357689 Roseiflexus castenholzii DSM 13941 5538506 YP_001431161.1 CDS Rcas_1041 NC_009767.1 1357692 1358978 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4378 major facilitator superfamily MFS_1; major facilitator transporter complement(1357692..1358978) Roseiflexus castenholzii DSM 13941 5538507 YP_001431162.1 CDS Rcas_1042 NC_009767.1 1359005 1359934 R PFAM: NHL repeat containing protein; KEGG: rrs:RoseRS_4377 hypothetical protein; NHL repeat-containing protein complement(1359005..1359934) Roseiflexus castenholzii DSM 13941 5538508 YP_001431163.1 CDS Rcas_1043 NC_009767.1 1360250 1360666 D KEGG: aav:Aave_4229 two component transcriptional regulator, LuxR family; response regulator receiver protein 1360250..1360666 Roseiflexus castenholzii DSM 13941 5538509 YP_001431164.1 CDS Rcas_1044 NC_009767.1 1360779 1361051 D PFAM: regulatory protein LuxR; KEGG: sye:Syncc9902_1855 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 1360779..1361051 Roseiflexus castenholzii DSM 13941 5538510 YP_001431165.1 CDS Rcas_1045 NC_009767.1 1361115 1361486 R KEGG: rrs:RoseRS_4491 hypothetical protein; hypothetical protein complement(1361115..1361486) Roseiflexus castenholzii DSM 13941 5538511 YP_001431166.1 CDS Rcas_1046 NC_009767.1 1361957 1362469 R KEGG: rrs:RoseRS_4492 hypothetical protein; hypothetical protein complement(1361957..1362469) Roseiflexus castenholzii DSM 13941 5538512 YP_001431167.1 CDS Rcas_1047 NC_009767.1 1362723 1364984 D PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0410 glycosyl transferase, family 39; glycosyl transferase family protein 1362723..1364984 Roseiflexus castenholzii DSM 13941 5538513 YP_001431168.1 CDS Rcas_1048 NC_009767.1 1365466 1365906 R KEGG: mgi:Mflv_5589 aminoglycoside nucleotidyltransferase; hypothetical protein complement(1365466..1365906) Roseiflexus castenholzii DSM 13941 5538514 YP_001431169.1 CDS Rcas_1049 NC_009767.1 1366201 1366386 R KEGG: psb:Psyr_1790 aldo/keto reductase; hypothetical protein complement(1366201..1366386) Roseiflexus castenholzii DSM 13941 5538515 YP_001431170.1 CDS Rcas_1050 NC_009767.1 1366370 1366768 R KEGG: rle:RL2357 hypothetical protein; hypothetical protein complement(1366370..1366768) Roseiflexus castenholzii DSM 13941 5538516 YP_001431171.1 CDS Rcas_1051 NC_009767.1 1366803 1367663 R PFAM: aldo/keto reductase; KEGG: gur:Gura_4373 2,5-didehydrogluconate reductase; 2,5-didehydrogluconate reductase complement(1366803..1367663) Roseiflexus castenholzii DSM 13941 5538517 YP_001431172.1 CDS Rcas_1052 NC_009767.1 1368127 1368522 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: aba:Acid345_2510 conserved hypothetical protein, cupin barrel; cupin complement(1368127..1368522) Roseiflexus castenholzii DSM 13941 5538518 YP_001431173.1 CDS Rcas_1054 NC_009767.1 1368865 1369800 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: pmy:Pmen_2638 AraC-type transcriptional regulator domain protein; AraC family transcriptional regulator 1368865..1369800 Roseiflexus castenholzii DSM 13941 5538520 YP_001431174.1 CDS Rcas_1055 NC_009767.1 1369819 1370346 D PFAM: bifunctional deaminase-reductase domain protein; KEGG: dsy:DSY4378 hypothetical protein; deaminase-reductase domain-containing protein 1369819..1370346 Roseiflexus castenholzii DSM 13941 5538521 YP_001431175.1 CDS Rcas_1056 NC_009767.1 1370451 1370768 R hypothetical protein complement(1370451..1370768) Roseiflexus castenholzii DSM 13941 5538522 YP_001431176.1 CDS Rcas_1057 NC_009767.1 1370983 1373139 R KEGG: rrs:RoseRS_0412 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; multi-sensor signal transduction histidine kinase complement(1370983..1373139) Roseiflexus castenholzii DSM 13941 5538523 YP_001431177.1 CDS Rcas_1058 NC_009767.1 1373498 1375459 D KEGG: rrs:RoseRS_0413 ABC-type dipeptide transport system periplasmic component-like protein; dipeptide ABC transporter periplasmic component-like protein 1373498..1375459 Roseiflexus castenholzii DSM 13941 5538524 YP_001431178.1 CDS Rcas_1059 NC_009767.1 1375556 1376758 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0414 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1375556..1376758 Roseiflexus castenholzii DSM 13941 5538525 YP_001431179.1 CDS Rcas_1060 NC_009767.1 1376771 1377775 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0415 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1376771..1377775 Roseiflexus castenholzii DSM 13941 5538526 YP_001431180.1 CDS Rcas_1061 NC_009767.1 1377837 1378829 D KEGG: rrs:RoseRS_0416 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1377837..1378829 Roseiflexus castenholzii DSM 13941 5538527 YP_001431181.1 CDS Rcas_1062 NC_009767.1 1378845 1379855 D KEGG: rrs:RoseRS_0417 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1378845..1379855 Roseiflexus castenholzii DSM 13941 5538528 YP_001431182.1 CDS Rcas_1063 NC_009767.1 1379868 1380887 D KEGG: rrs:RoseRS_0418 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1379868..1380887 Roseiflexus castenholzii DSM 13941 5538529 YP_001431183.1 CDS Rcas_1064 NC_009767.1 1380914 1381945 D KEGG: rrs:RoseRS_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 1380914..1381945 Roseiflexus castenholzii DSM 13941 5538530 YP_001431184.1 CDS Rcas_1065 NC_009767.1 1382543 1383121 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0420 protein of unknown function DUF820; hypothetical protein 1382543..1383121 Roseiflexus castenholzii DSM 13941 5538531 YP_001431185.1 CDS Rcas_1066 NC_009767.1 1384316 1385203 R PFAM: YdjC family protein; KEGG: rrs:RoseRS_0422 YdjC family protein; hypothetical protein complement(1384316..1385203) Roseiflexus castenholzii DSM 13941 5538532 YP_001431186.1 CDS Rcas_1067 NC_009767.1 1385219 1385854 R KEGG: rrs:RoseRS_0423 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase complement(1385219..1385854) Roseiflexus castenholzii DSM 13941 5538533 YP_001431187.1 CDS Rcas_1068 NC_009767.1 1386147 1387262 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0424 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1386147..1387262) Roseiflexus castenholzii DSM 13941 5538534 YP_001431188.1 CDS Rcas_1069 NC_009767.1 1387687 1388193 D PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_0425 peptidoglycan-binding LysM; peptidoglycan-binding protein LysM 1387687..1388193 Roseiflexus castenholzii DSM 13941 5538535 YP_001431189.1 CDS Rcas_1070 NC_009767.1 1388419 1389075 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 complement(1388419..1389075) Roseiflexus castenholzii DSM 13941 5538536 YP_001431190.1 CDS Rcas_1071 NC_009767.1 1389315 1389971 D KEGG: rrs:RoseRS_0427 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: peptidase S24 S26A and S26B; LexA DNA-binding domain protein; SOS-response transcriptional repressor LexA 1389315..1389971 Roseiflexus castenholzii DSM 13941 5538537 YP_001431191.1 CDS Rcas_1072 NC_009767.1 1390002 1390598 D PFAM: protein of unknown function DUF205; KEGG: rrs:RoseRS_3809 protein of unknown function DUF205; hypothetical protein 1390002..1390598 Roseiflexus castenholzii DSM 13941 5538538 YP_001431192.1 CDS Rcas_1073 NC_009767.1 1390595 1391752 R PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3808 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1390595..1391752) Roseiflexus castenholzii DSM 13941 5538539 YP_001431193.1 CDS Rcas_1074 NC_009767.1 1391791 1393443 R KEGG: xft:PD1607 modification methylase NspV; modification methylase NspV complement(1391791..1393443) Roseiflexus castenholzii DSM 13941 5538540 YP_001431194.1 CDS Rcas_1076 NC_009767.1 1394118 1395752 R PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_3807 AAA ATPase, central domain protein; recombination factor protein RarA complement(1394118..1395752) Roseiflexus castenholzii DSM 13941 5538542 YP_001431195.1 CDS Rcas_1077 NC_009767.1 1396095 1396355 R PFAM: Transglycosylase-associated protein; KEGG: rrs:RoseRS_3806 transglycosylase-associated protein; transglycosylase-associated protein complement(1396095..1396355) Roseiflexus castenholzii DSM 13941 5538543 YP_001431196.1 CDS Rcas_1078 NC_009767.1 1397016 1398056 D PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3805 histone deacetylase superfamily; histone deacetylase superfamily protein 1397016..1398056 Roseiflexus castenholzii DSM 13941 5538544 YP_001431197.1 CDS Rcas_1079 NC_009767.1 1398063 1398647 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1398063..1398647 Roseiflexus castenholzii DSM 13941 5538545 YP_001431198.1 CDS Rcas_1080 NC_009767.1 1398657 1399574 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0124 site-specific DNA-methyltransferase (adenine-specific); adenine-specific DNA methyltransferase complement(1398657..1399574) Roseiflexus castenholzii DSM 13941 5538546 YP_001431199.1 CDS Rcas_1081 NC_009767.1 1399969 1401078 D PFAM: mannose-6-phosphate isomerase type I; KEGG: rrs:RoseRS_3802 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1399969..1401078 Roseiflexus castenholzii DSM 13941 5538547 YP_001431200.1 CDS Rcas_1082 NC_009767.1 1401313 1402320 D PFAM: protein of unknown function DUF95 transmembrane; KEGG: rrs:RoseRS_3801 protein of unknown function DUF95, transmembrane; hypothetical protein 1401313..1402320 Roseiflexus castenholzii DSM 13941 5538548 YP_001431201.1 CDS Rcas_1084 NC_009767.1 1404006 1405415 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3797 major facilitator superfamily MFS_1; major facilitator transporter complement(1404006..1405415) Roseiflexus castenholzii DSM 13941 5538550 YP_001431202.1 CDS Rcas_1085 NC_009767.1 1405755 1408355 D KEGG: rrs:RoseRS_3796 hypothetical protein; hypothetical protein 1405755..1408355 Roseiflexus castenholzii DSM 13941 5538551 YP_001431203.1 CDS Rcas_1086 NC_009767.1 1408624 1409376 D TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: rrs:RoseRS_3795 methionine aminopeptidase, type I; methionine aminopeptidase 1408624..1409376 Roseiflexus castenholzii DSM 13941 5538552 YP_001431204.1 CDS Rcas_1087 NC_009767.1 1409381 1410574 R TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: rrs:RoseRS_3794 cell division protein FtsZ; cell division protein FtsZ complement(1409381..1410574) Roseiflexus castenholzii DSM 13941 5538553 YP_001431205.1 CDS Rcas_1088 NC_009767.1 1410592 1411836 R PFAM: cell division protein FtsA; KEGG: rrs:RoseRS_3793 cell division protein FtsA; cell division protein FtsA complement(1410592..1411836) Roseiflexus castenholzii DSM 13941 5538554 YP_001431206.1 CDS Rcas_1089 NC_009767.1 1411854 1412681 R PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: rrs:RoseRS_3792 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein complement(1411854..1412681) Roseiflexus castenholzii DSM 13941 5538555 YP_001431207.1 CDS Rcas_1090 NC_009767.1 1412674 1413789 R KEGG: rrs:RoseRS_3791 D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase complement(1412674..1413789) Roseiflexus castenholzii DSM 13941 5538556 YP_001431208.1 CDS Rcas_1091 NC_009767.1 1413828 1414715 R catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1413828..1414715) Roseiflexus castenholzii DSM 13941 5538557 YP_001431209.1 CDS Rcas_1092 NC_009767.1 1414719 1415996 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3789 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(1414719..1415996) Roseiflexus castenholzii DSM 13941 5538558 YP_001431210.1 CDS Rcas_1093 NC_009767.1 1415993 1417423 R TIGRFAM: UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3788 UDP-N-acetylmuramate--alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(1415993..1417423) Roseiflexus castenholzii DSM 13941 5538559 YP_001431211.1 CDS Rcas_1094 NC_009767.1 1417442 1418089 R KEGG: rrs:RoseRS_3787 hypothetical protein; hypothetical protein complement(1417442..1418089) Roseiflexus castenholzii DSM 13941 5538560 YP_001431212.1 CDS Rcas_1095 NC_009767.1 1418086 1419396 R PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; KEGG: rrs:RoseRS_3786 UDPdiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase complement(1418086..1419396) Roseiflexus castenholzii DSM 13941 5538561 YP_001431213.1 CDS Rcas_1096 NC_009767.1 1419257 1420519 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rrs:RoseRS_3785 cell division protein FtsW; cell division protein FtsW complement(1419257..1420519) Roseiflexus castenholzii DSM 13941 5538562 YP_001431214.1 CDS Rcas_1097 NC_009767.1 1420572 1421417 R PFAM: Rhomboid family protein; KEGG: rrs:RoseRS_3784 rhomboid family protein; rhomboid family protein complement(1420572..1421417) Roseiflexus castenholzii DSM 13941 5538563 YP_001431215.1 CDS Rcas_1098 NC_009767.1 1421414 1422832 R TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3783 UDP-N-acetylmuramoylalanine--D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(1421414..1422832) Roseiflexus castenholzii DSM 13941 5538564 YP_001431216.1 CDS mraY NC_009767.1 1422837 1423928 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1422837..1423928) Roseiflexus castenholzii DSM 13941 5538565 YP_001431217.1 CDS Rcas_1100 NC_009767.1 1423980 1425437 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_3781 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase complement(1423980..1425437) Roseiflexus castenholzii DSM 13941 5538566 YP_001431218.1 CDS Rcas_1101 NC_009767.1 1425522 1427378 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rrs:RoseRS_3780 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase complement(1425522..1427378) Roseiflexus castenholzii DSM 13941 5538567 YP_001431219.1 CDS Rcas_1102 NC_009767.1 1427390 1427788 R KEGG: rrs:RoseRS_3779 hypothetical protein; hypothetical protein complement(1427390..1427788) Roseiflexus castenholzii DSM 13941 5538568 YP_001431220.1 CDS mraW NC_009767.1 1427801 1428739 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rrs:RoseRS_3778 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(1427801..1428739) Roseiflexus castenholzii DSM 13941 5538569 YP_001431221.1 CDS Rcas_1104 NC_009767.1 1429947 1430378 R TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: rrs:RoseRS_3777 MraZ protein; MraZ protein complement(1429947..1430378) Roseiflexus castenholzii DSM 13941 5538570 YP_001431222.1 CDS Rcas_1105 NC_009767.1 1431473 1431961 D PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0074 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1431473..1431961 Roseiflexus castenholzii DSM 13941 5538571 YP_001431223.1 CDS Rcas_1106 NC_009767.1 1431882 1432316 D PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_0073 protein of unknown function DUF86; hypothetical protein 1431882..1432316 Roseiflexus castenholzii DSM 13941 5538572 YP_001431224.1 CDS Rcas_1107 NC_009767.1 1433177 1434892 R SMART: AAA ATPase; KEGG: mhu:Mhun_2627 hypothetical protein; ATPase AAA complement(1433177..1434892) Roseiflexus castenholzii DSM 13941 5538573 YP_001431225.1 CDS Rcas_1108 NC_009767.1 1435000 1435206 R hypothetical protein complement(1435000..1435206) Roseiflexus castenholzii DSM 13941 5538574 YP_001431226.1 CDS Rcas_1109 NC_009767.1 1435571 1436737 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_3775 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase complement(1435571..1436737) Roseiflexus castenholzii DSM 13941 5538575 YP_001431227.1 CDS Rcas_1110 NC_009767.1 1437043 1439859 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3774 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 1437043..1439859 Roseiflexus castenholzii DSM 13941 5538576 YP_001431228.1 CDS Rcas_1111 NC_009767.1 1439991 1440476 D PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3773 NUDIX hydrolase; NUDIX hydrolase 1439991..1440476 Roseiflexus castenholzii DSM 13941 5538577 YP_001431229.1 CDS ruvA NC_009767.1 1440473 1441066 D plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1440473..1441066 Roseiflexus castenholzii DSM 13941 5538578 YP_001431230.1 CDS Rcas_1113 NC_009767.1 1441202 1444330 D KEGG: rrs:RoseRS_3771 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 1441202..1444330 Roseiflexus castenholzii DSM 13941 5538579 YP_001431231.1 CDS Rcas_1114 NC_009767.1 1444327 1445502 D PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_3770 response regulator receiver protein; response regulator receiver modulated serine phosphatase 1444327..1445502 Roseiflexus castenholzii DSM 13941 5538580 YP_001431232.1 CDS Rcas_1115 NC_009767.1 1446961 1449102 D KEGG: rrs:RoseRS_3769 hypothetical protein; hypothetical protein 1446961..1449102 Roseiflexus castenholzii DSM 13941 5538581 YP_001431233.1 CDS Rcas_1116 NC_009767.1 1449102 1451177 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3768 cellulose synthase (UDP-forming); cellulose synthase 1449102..1451177 Roseiflexus castenholzii DSM 13941 5538582 YP_001431234.1 CDS Rcas_1117 NC_009767.1 1451898 1452251 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3767 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1451898..1452251 Roseiflexus castenholzii DSM 13941 5538583 YP_001431235.1 CDS Rcas_1118 NC_009767.1 1452241 1452681 D KEGG: rrs:RoseRS_3766 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 1452241..1452681 Roseiflexus castenholzii DSM 13941 5538584 YP_001431236.1 CDS Rcas_1119 NC_009767.1 1452778 1453563 D KEGG: rrs:RoseRS_3765 hypothetical protein; hypothetical protein 1452778..1453563 Roseiflexus castenholzii DSM 13941 5538585 YP_001431237.1 CDS Rcas_1120 NC_009767.1 1453563 1454258 D PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3764 haloacid dehalogenase domain protein hydrolase; hydrolase 1453563..1454258 Roseiflexus castenholzii DSM 13941 5538586 YP_001431238.1 CDS Rcas_1121 NC_009767.1 1454375 1454533 R PFAM: Flp/Fap pilin component; KEGG: drm:Dred_2110 Flp/Fap pilin component; Flp/Fap pilin component complement(1454375..1454533) Roseiflexus castenholzii DSM 13941 5538587 YP_001431239.1 CDS Rcas_1122 NC_009767.1 1454781 1455854 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3762 histidine kinase; histidine kinase complement(1454781..1455854) Roseiflexus castenholzii DSM 13941 5538588 YP_001431240.1 CDS Rcas_1123 NC_009767.1 1455921 1456676 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3761 glycosyl transferase, family 2; glycosyl transferase family protein complement(1455921..1456676) Roseiflexus castenholzii DSM 13941 5538589 YP_001431241.1 CDS Rcas_1124 NC_009767.1 1456767 1458326 D KEGG: rrs:RoseRS_3760 hypothetical protein; hypothetical protein 1456767..1458326 Roseiflexus castenholzii DSM 13941 5538590 YP_001431242.1 CDS Rcas_1125 NC_009767.1 1458337 1459848 D KEGG: rrs:RoseRS_3759 hypothetical protein; hypothetical protein 1458337..1459848 Roseiflexus castenholzii DSM 13941 5538591 YP_001431243.1 CDS Rcas_1126 NC_009767.1 1459861 1461105 R PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_3757 protein of unknown function DUF214; hypothetical protein complement(1459861..1461105) Roseiflexus castenholzii DSM 13941 5538592 YP_001431244.1 CDS Rcas_1127 NC_009767.1 1461662 1462597 R TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: rrs:RoseRS_3756 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF complement(1461662..1462597) Roseiflexus castenholzii DSM 13941 5538593 YP_001431245.1 CDS Rcas_1128 NC_009767.1 1462594 1463487 R TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: rrs:RoseRS_3755 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B complement(1462594..1463487) Roseiflexus castenholzii DSM 13941 5538594 YP_001431246.1 CDS Rcas_1129 NC_009767.1 1463760 1464761 R PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rrs:RoseRS_3754 phosphoesterase, RecJ domain protein; phosphoesterase domain-containing protein complement(1463760..1464761) Roseiflexus castenholzii DSM 13941 5538595 YP_001431247.1 CDS Rcas_1130 NC_009767.1 1464758 1465354 R PFAM: methyltransferase small; KEGG: rrs:RoseRS_3753 methyltransferase small; methyltransferase small complement(1464758..1465354) Roseiflexus castenholzii DSM 13941 5538596 YP_001431248.1 CDS Rcas_1131 NC_009767.1 1465394 1465786 R PFAM: ribosome-binding factor A; KEGG: rrs:RoseRS_3752 ribosome-binding factor A; ribosome-binding factor A complement(1465394..1465786) Roseiflexus castenholzii DSM 13941 5538597 YP_001431249.1 CDS infB NC_009767.1 1465783 1467999 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(1465783..1467999) Roseiflexus castenholzii DSM 13941 5538598 YP_001431250.1 CDS Rcas_1133 NC_009767.1 1468116 1468430 R PFAM: protein of unknown function DUF448; KEGG: rrs:RoseRS_3750 protein of unknown function DUF448; hypothetical protein complement(1468116..1468430) Roseiflexus castenholzii DSM 13941 5538599 YP_001431251.1 CDS Rcas_1134 NC_009767.1 1468453 1469781 R KEGG: rrs:RoseRS_3749 NusA antitermination factor; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein; NusA antitermination factor complement(1468453..1469781) Roseiflexus castenholzii DSM 13941 5538600 YP_001431252.1 CDS Rcas_1135 NC_009767.1 1470415 1471932 D KEGG: rrs:RoseRS_3748 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; Mg chelatase subunit ChlI 1470415..1471932 Roseiflexus castenholzii DSM 13941 5538601 YP_001431253.1 CDS Rcas_1137 NC_009767.1 1473100 1474083 R TIGRFAM: Quinone oxidoreductase PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3745 alcohol dehydrogenase, zinc-binding domain protein; quinone oxidoreductase PIG3 complement(1473100..1474083) Roseiflexus castenholzii DSM 13941 5538603 YP_001431254.1 CDS Rcas_1138 NC_009767.1 1474080 1475144 R PFAM: Ribosomal small subunit Rsm22; KEGG: rrs:RoseRS_3744 rRNA methylase-like protein; ribosomal small subunit Rsm22 complement(1474080..1475144) Roseiflexus castenholzii DSM 13941 5538604 YP_001431255.1 CDS Rcas_1139 NC_009767.1 1475304 1475741 D KEGG: rrs:RoseRS_3418 hypothetical protein; hypothetical protein 1475304..1475741 Roseiflexus castenholzii DSM 13941 5538605 YP_001431256.1 CDS Rcas_1141 NC_009767.1 1478382 1479719 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3420 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1478382..1479719 Roseiflexus castenholzii DSM 13941 5538607 YP_001431257.1 CDS Rcas_1142 NC_009767.1 1479694 1480362 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3421 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1479694..1480362 Roseiflexus castenholzii DSM 13941 5538608 YP_001431258.1 CDS Rcas_1143 NC_009767.1 1480452 1480958 R KEGG: fra:Francci3_4119 hypothetical protein; hypothetical protein complement(1480452..1480958) Roseiflexus castenholzii DSM 13941 5538609 YP_001431259.1 CDS Rcas_1144 NC_009767.1 1480963 1481553 R PFAM: protein of unknown function DUF218; KEGG: rrs:RoseRS_3427 protein of unknown function DUF218; hypothetical protein complement(1480963..1481553) Roseiflexus castenholzii DSM 13941 5538610 YP_001431260.1 CDS Rcas_1145 NC_009767.1 1481812 1482495 D PFAM: LmbE family protein; KEGG: rrs:RoseRS_3428 LmbE family protein; LmbE family protein 1481812..1482495 Roseiflexus castenholzii DSM 13941 5538611 YP_001431261.1 CDS Rcas_1146 NC_009767.1 1482499 1483701 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3429 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(1482499..1483701) Roseiflexus castenholzii DSM 13941 5538612 YP_001431262.1 CDS Rcas_1147 NC_009767.1 1483858 1485153 R PFAM: peptidase M16 domain protein; KEGG: rrs:RoseRS_0397 peptidase M16 domain protein; peptidase M16 domain-containing protein complement(1483858..1485153) Roseiflexus castenholzii DSM 13941 5538613 YP_001431263.1 CDS Rcas_1148 NC_009767.1 1485289 1486959 D KEGG: rrs:RoseRS_0396 hypothetical protein; hypothetical protein 1485289..1486959 Roseiflexus castenholzii DSM 13941 5538614 YP_001431264.1 CDS Rcas_1149 NC_009767.1 1487338 1487589 D KEGG: rrs:RoseRS_0395 hypothetical protein; hypothetical protein 1487338..1487589 Roseiflexus castenholzii DSM 13941 5538615 YP_001431265.1 CDS Rcas_1150 NC_009767.1 1487835 1489880 D PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0394 glycosyl transferase, family 39; glycosyl transferase family protein 1487835..1489880 Roseiflexus castenholzii DSM 13941 5538616 YP_001431266.1 CDS Rcas_1151 NC_009767.1 1489867 1490730 R KEGG: rrs:RoseRS_0393 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha complement(1489867..1490730) Roseiflexus castenholzii DSM 13941 5538617 YP_001431267.1 CDS Rcas_1152 NC_009767.1 1490744 1491640 R TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rrs:RoseRS_0392 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta complement(1490744..1491640) Roseiflexus castenholzii DSM 13941 5538618 YP_001431268.1 CDS Rcas_1153 NC_009767.1 1491857 1493386 D PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_0391 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 1491857..1493386 Roseiflexus castenholzii DSM 13941 5538619 YP_001431269.1 CDS Rcas_1154 NC_009767.1 1493524 1494342 R KEGG: rrs:RoseRS_0390 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase complement(1493524..1494342) Roseiflexus castenholzii DSM 13941 5538620 YP_001431270.1 CDS glyA NC_009767.1 1494384 1495694 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(1494384..1495694) Roseiflexus castenholzii DSM 13941 5538621 YP_001431271.1 CDS Rcas_1156 NC_009767.1 1495867 1496676 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0388 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1495867..1496676 Roseiflexus castenholzii DSM 13941 5538622 YP_001431272.1 CDS Rcas_1157 NC_009767.1 1496872 1497870 D PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: rrs:RoseRS_0387 glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); glyceraldehyde-3-phosphate dehydrogenase 1496872..1497870 Roseiflexus castenholzii DSM 13941 5538623 YP_001431273.1 CDS Rcas_1158 NC_009767.1 1499938 1501149 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_0386 glycosyl transferase, family 2; glycosyl transferase family protein 1499938..1501149 Roseiflexus castenholzii DSM 13941 5538624 YP_001431274.1 CDS Rcas_1159 NC_009767.1 1501153 1503150 R KEGG: rrs:RoseRS_0383 hypothetical protein; hypothetical protein complement(1501153..1503150) Roseiflexus castenholzii DSM 13941 5538625 YP_001431275.1 CDS Rcas_1160 NC_009767.1 1503436 1504506 R PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: rrs:RoseRS_0382 myo-inositol-1-phosphate synthase; myo-inositol-1-phosphate synthase complement(1503436..1504506) Roseiflexus castenholzii DSM 13941 5538626 YP_001431276.1 CDS Rcas_1161 NC_009767.1 1505758 1508658 R KEGG: rrs:RoseRS_0585 hypothetical protein; hypothetical protein complement(1505758..1508658) Roseiflexus castenholzii DSM 13941 5538627 YP_001431277.1 CDS Rcas_1162 NC_009767.1 1508990 1509763 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0588 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1508990..1509763) Roseiflexus castenholzii DSM 13941 5538628 YP_001431278.1 CDS Rcas_1163 NC_009767.1 1510131 1511108 D KEGG: rrs:RoseRS_0589 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 1510131..1511108 Roseiflexus castenholzii DSM 13941 5538629 YP_001431279.1 CDS Rcas_1164 NC_009767.1 1511096 1511371 D hypothetical protein 1511096..1511371 Roseiflexus castenholzii DSM 13941 5538630 YP_001431280.1 CDS Rcas_1165 NC_009767.1 1511676 1512863 D PFAM: protein of unknown function DUF111; KEGG: rrs:RoseRS_0590 protein of unknown function DUF111; hypothetical protein 1511676..1512863 Roseiflexus castenholzii DSM 13941 5538631 YP_001431281.1 CDS Rcas_1166 NC_009767.1 1512926 1513333 R KEGG: mta:Moth_2011 PilT protein-like; twitching motility protein PilT complement(1512926..1513333) Roseiflexus castenholzii DSM 13941 5538632 YP_001431282.1 CDS Rcas_1167 NC_009767.1 1513284 1513556 R KEGG: gvi:gll1697 unknown protein; hypothetical protein complement(1513284..1513556) Roseiflexus castenholzii DSM 13941 5538633 YP_001431283.1 CDS Rcas_1168 NC_009767.1 1514043 1514276 R TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(1514043..1514276) Roseiflexus castenholzii DSM 13941 5538634 YP_001431284.1 CDS Rcas_1169 NC_009767.1 1514273 1514671 R PFAM: PilT protein domain protein; KEGG: rrs:RoseRS_0930 PilT protein domain protein; twitching motility protein PilT complement(1514273..1514671) Roseiflexus castenholzii DSM 13941 5538635 YP_001431285.1 CDS Rcas_1170 NC_009767.1 1514865 1514996 D KEGG: rrs:RoseRS_4283 prevent-host-death family protein; prevent-host-death family protein 1514865..1514996 Roseiflexus castenholzii DSM 13941 5538636 YP_001431286.1 CDS Rcas_1171 NC_009767.1 1515339 1516283 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_4284 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 1515339..1516283 Roseiflexus castenholzii DSM 13941 5538637 YP_001431287.1 CDS Rcas_1172 NC_009767.1 1516937 1517809 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0801 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1516937..1517809) Roseiflexus castenholzii DSM 13941 5538638 YP_001431288.1 CDS Rcas_1173 NC_009767.1 1517806 1518798 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0802 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(1517806..1518798) Roseiflexus castenholzii DSM 13941 5538639 YP_001431289.1 CDS Rcas_1174 NC_009767.1 1518896 1520263 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0803 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(1518896..1520263) Roseiflexus castenholzii DSM 13941 5538640 YP_001431290.1 CDS Rcas_1175 NC_009767.1 1520706 1521785 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0804 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1520706..1521785) Roseiflexus castenholzii DSM 13941 5538641 YP_001431291.1 CDS Rcas_1176 NC_009767.1 1521790 1522479 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0805 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1521790..1522479) Roseiflexus castenholzii DSM 13941 5538642 YP_001431292.1 CDS Rcas_1177 NC_009767.1 1522476 1522985 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rrs:RoseRS_0806 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(1522476..1522985) Roseiflexus castenholzii DSM 13941 5538643 YP_001431293.1 CDS Rcas_1178 NC_009767.1 1523089 1523649 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0807 methyltransferase type 11; type 11 methyltransferase complement(1523089..1523649) Roseiflexus castenholzii DSM 13941 5538644 YP_001431294.1 CDS Rcas_1179 NC_009767.1 1523782 1524777 D PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_0808 radical SAM domain protein; radical SAM domain-containing protein 1523782..1524777 Roseiflexus castenholzii DSM 13941 5538645 YP_001431295.1 CDS Rcas_1180 NC_009767.1 1524913 1525083 D KEGG: rrs:RoseRS_0809 protein of unknown function DUF59; hypothetical protein 1524913..1525083 Roseiflexus castenholzii DSM 13941 5538646 YP_001431296.1 CDS Rcas_1181 NC_009767.1 1525107 1525811 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0810 ABC transporter related; ABC transporter-like protein 1525107..1525811 Roseiflexus castenholzii DSM 13941 5538647 YP_001431297.1 CDS Rcas_1182 NC_009767.1 1525820 1526815 D PFAM: SufBD protein; KEGG: rrs:RoseRS_0811 SufBD protein; SufBD protein 1525820..1526815 Roseiflexus castenholzii DSM 13941 5538648 YP_001431298.1 CDS Rcas_1183 NC_009767.1 1527027 1528784 R TIGRFAM: sulfate transporter; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: rrs:RoseRS_0812 sulfate transporter; sulfate transporter complement(1527027..1528784) Roseiflexus castenholzii DSM 13941 5538649 YP_001431299.1 CDS Rcas_1184 NC_009767.1 1528805 1529302 R PFAM: protein of unknown function DUF442; KEGG: rrs:RoseRS_0813 protein of unknown function DUF442; hypothetical protein complement(1528805..1529302) Roseiflexus castenholzii DSM 13941 5538650 YP_001431300.1 CDS Rcas_1185 NC_009767.1 1529321 1529899 R KEGG: rrs:RoseRS_0814 hypothetical protein; hypothetical protein complement(1529321..1529899) Roseiflexus castenholzii DSM 13941 5538651 YP_001431301.1 CDS Rcas_1186 NC_009767.1 1530306 1530557 R PFAM: SirA family protein; KEGG: rrs:RoseRS_0815 SirA family protein; SirA family protein complement(1530306..1530557) Roseiflexus castenholzii DSM 13941 5538652 YP_001431302.1 CDS Rcas_1187 NC_009767.1 1530756 1531937 R PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rrs:RoseRS_0816 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(1530756..1531937) Roseiflexus castenholzii DSM 13941 5538653 YP_001431303.1 CDS Rcas_1188 NC_009767.1 1532934 1533989 D KEGG: rrs:RoseRS_4471 hypothetical protein; hypothetical protein 1532934..1533989 Roseiflexus castenholzii DSM 13941 5538654 YP_001431304.1 CDS Rcas_1189 NC_009767.1 1534178 1534915 R PFAM: ribonuclease H; KEGG: sat:SYN_00291 ribonuclease H; ribonuclease H complement(1534178..1534915) Roseiflexus castenholzii DSM 13941 5538655 YP_001431305.1 CDS Rcas_1190 NC_009767.1 1535452 1536522 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_0817 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(1535452..1536522) Roseiflexus castenholzii DSM 13941 5538656 YP_001431306.1 CDS Rcas_1191 NC_009767.1 1536652 1536810 R hypothetical protein complement(1536652..1536810) Roseiflexus castenholzii DSM 13941 5538657 YP_001431307.1 CDS Rcas_1192 NC_009767.1 1536916 1538418 D PFAM: Ppx/GppA phosphatase; KEGG: rrs:RoseRS_0819 Ppx/GppA phosphatase; Ppx/GppA phosphatase 1536916..1538418 Roseiflexus castenholzii DSM 13941 5538658 YP_001431308.1 CDS Rcas_1193 NC_009767.1 1538608 1541028 R PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rrs:RoseRS_0820 cell divisionFtsK/SpoIIIE; cell division protein FtsK complement(1538608..1541028) Roseiflexus castenholzii DSM 13941 5538659 YP_001431309.1 CDS Rcas_1194 NC_009767.1 1543066 1543416 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2160 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1543066..1543416 Roseiflexus castenholzii DSM 13941 5538660 YP_001431310.1 CDS Rcas_1195 NC_009767.1 1543595 1544404 D TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2161 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1543595..1544404 Roseiflexus castenholzii DSM 13941 5538661 YP_001431311.1 CDS Rcas_1196 NC_009767.1 1544401 1547415 D PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2162 protein serine phosphatase with GAF(s) sensor(s); GAF sensor-containing protein serine phosphatase 1544401..1547415 Roseiflexus castenholzii DSM 13941 5538662 YP_001431312.1 CDS Rcas_1197 NC_009767.1 1547478 1547987 D PFAM: PHA accumulation regulator DNA-binding protein; KEGG: rrs:RoseRS_2163 PHA accumulation regulator DNA-binding protein; PHA accumulation regulator DNA-binding protein 1547478..1547987 Roseiflexus castenholzii DSM 13941 5538663 YP_001431313.1 CDS Rcas_1198 NC_009767.1 1548155 1549339 D PFAM: Patatin; KEGG: rrs:RoseRS_2164 patatin; patatin 1548155..1549339 Roseiflexus castenholzii DSM 13941 5538664 YP_001431314.1 CDS Rcas_1199 NC_009767.1 1549662 1550402 R KEGG: rrs:RoseRS_4071 hypothetical protein; hypothetical protein complement(1549662..1550402) Roseiflexus castenholzii DSM 13941 5538665 YP_001431315.1 CDS Rcas_1200 NC_009767.1 1550416 1552893 R PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_4070 ATPase AAA-2 domain protein; ATPase complement(1550416..1552893) Roseiflexus castenholzii DSM 13941 5538666 YP_001431316.1 CDS Rcas_1201 NC_009767.1 1553794 1554249 D KEGG: rrs:RoseRS_4069 hypothetical protein; hypothetical protein 1553794..1554249 Roseiflexus castenholzii DSM 13941 5538667 YP_001431317.1 CDS Rcas_1202 NC_009767.1 1554321 1555082 R PFAM: protein of unknown function DUF124; KEGG: rrs:RoseRS_4068 protein of unknown function DUF124; hypothetical protein complement(1554321..1555082) Roseiflexus castenholzii DSM 13941 5538668 YP_001431318.1 CDS Rcas_1203 NC_009767.1 1555648 1557513 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_4067 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit complement(1555648..1557513) Roseiflexus castenholzii DSM 13941 5538669 YP_001431319.1 CDS Rcas_1204 NC_009767.1 1557522 1558484 R PFAM: ferrochelatase; KEGG: rrs:RoseRS_4065 ferrochelatase; ferrochelatase complement(1557522..1558484) Roseiflexus castenholzii DSM 13941 5538670 YP_001431320.1 CDS Rcas_1205 NC_009767.1 1558695 1560560 R TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: rrs:RoseRS_4064 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; glucosamine--fructose-6-phosphate aminotransferase complement(1558695..1560560) Roseiflexus castenholzii DSM 13941 5538671 YP_001431321.1 CDS Rcas_1206 NC_009767.1 1560610 1560972 R hypothetical protein complement(1560610..1560972) Roseiflexus castenholzii DSM 13941 5538672 YP_001431322.1 CDS Rcas_1207 NC_009767.1 1561196 1561513 R PFAM: DNA polymerase beta domain protein region; KEGG: cph:Cpha266_0292 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(1561196..1561513) Roseiflexus castenholzii DSM 13941 5538673 YP_001431323.1 CDS Rcas_1208 NC_009767.1 1561510 1561932 R TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: cph:Cpha266_0291 nucleotidyltransferase substrate binding protein, HI0074 family; nucleotidyltransferase substrate-binding protein complement(1561510..1561932) Roseiflexus castenholzii DSM 13941 5538674 YP_001431324.1 CDS Rcas_1209 NC_009767.1 1562359 1563546 D PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_4133 aminotransferase, class I and II; class I/II aminotransferase 1562359..1563546 Roseiflexus castenholzii DSM 13941 5538675 YP_001431325.1 CDS Rcas_1210 NC_009767.1 1563647 1564837 D PFAM: Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_4132 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 1563647..1564837 Roseiflexus castenholzii DSM 13941 5538676 YP_001431326.1 CDS Rcas_1211 NC_009767.1 1564948 1566579 R TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rrs:RoseRS_4131 chaperonin GroEL; chaperonin GroEL complement(1564948..1566579) Roseiflexus castenholzii DSM 13941 5538677 YP_001431327.1 CDS Rcas_1212 NC_009767.1 1566640 1566945 R PFAM: chaperonin Cpn10; KEGG: rrs:RoseRS_4130 chaperonin Cpn10; chaperonin Cpn10 complement(1566640..1566945) Roseiflexus castenholzii DSM 13941 5538678 YP_001431328.1 CDS glpX NC_009767.1 1567225 1568214 D type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1567225..1568214 Roseiflexus castenholzii DSM 13941 5538679 YP_001431329.1 CDS Rcas_1214 NC_009767.1 1568232 1569299 R TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_4128 glucose-1-phosphate thymidyltransferase; glucose-1-phosphate thymidylyltransferase complement(1568232..1569299) Roseiflexus castenholzii DSM 13941 5538680 YP_001431330.1 CDS Rcas_1215 NC_009767.1 1569455 1571053 R PFAM: NLP/P60 protein; protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_4127 NLP/P60 protein; NLP/P60 protein complement(1569455..1571053) Roseiflexus castenholzii DSM 13941 5538681 YP_001431331.1 CDS Rcas_1216 NC_009767.1 1571309 1572022 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rrs:RoseRS_4126 glycerophosphodiester phosphodiesterase; glycerophosphodiester phosphodiesterase complement(1571309..1572022) Roseiflexus castenholzii DSM 13941 5538682 YP_001431332.1 CDS Rcas_1217 NC_009767.1 1572092 1572634 R PFAM: zinc finger SWIM domain protein; KEGG: rrs:RoseRS_4125 zinc finger, SWIM domain protein; zinc finger SWIM domain-containing protein complement(1572092..1572634) Roseiflexus castenholzii DSM 13941 5538683 YP_001431333.1 CDS Rcas_1218 NC_009767.1 1573264 1574610 R PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_4124 phosphomannomutase; phosphomannomutase complement(1573264..1574610) Roseiflexus castenholzii DSM 13941 5538685 YP_001431334.1 CDS Rcas_1219 NC_009767.1 1575211 1577526 R KEGG: rrs:RoseRS_4122 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(1575211..1577526) Roseiflexus castenholzii DSM 13941 5538686 YP_001431335.1 CDS Rcas_1220 NC_009767.1 1577621 1578862 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_4121 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(1577621..1578862) Roseiflexus castenholzii DSM 13941 5538687 YP_001431336.1 CDS Rcas_1221 NC_009767.1 1579478 1579972 D PFAM: PilT protein domain protein; KEGG: mhu:Mhun_2151 PilT protein-like; twitching motility protein PilT 1579478..1579972 Roseiflexus castenholzii DSM 13941 5538688 YP_001431337.1 CDS Rcas_1222 NC_009767.1 1579902 1581395 R PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_0829 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1579902..1581395) Roseiflexus castenholzii DSM 13941 5538689 YP_001431338.1 CDS Rcas_1223 NC_009767.1 1581662 1582540 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pau:PA14_32880 hypothetical protein; type 12 methyltransferase 1581662..1582540 Roseiflexus castenholzii DSM 13941 5538690 YP_001431339.1 CDS Rcas_1224 NC_009767.1 1582596 1583795 R TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_0842 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase complement(1582596..1583795) Roseiflexus castenholzii DSM 13941 5538691 YP_001431340.1 CDS Rcas_1225 NC_009767.1 1583941 1584282 D hypothetical protein 1583941..1584282 Roseiflexus castenholzii DSM 13941 5538692 YP_001431341.1 CDS Rcas_1226 NC_009767.1 1584336 1586153 R PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: rrs:RoseRS_0843 5'-nucleotidase domain protein; 5'-nucleotidase domain-containing protein complement(1584336..1586153) Roseiflexus castenholzii DSM 13941 5538693 YP_001431342.1 CDS Rcas_1227 NC_009767.1 1586602 1587204 D KEGG: rrs:RoseRS_0591 hypothetical protein; hypothetical protein 1586602..1587204 Roseiflexus castenholzii DSM 13941 5538696 YP_001431343.1 CDS Rcas_1228 NC_009767.1 1587281 1587895 R PFAM: regulatory protein LuxR; KEGG: rrs:RoseRS_0799 response regulator receiver protein; LuxR family transcriptional regulator complement(1587281..1587895) Roseiflexus castenholzii DSM 13941 5538697 YP_001431344.1 CDS Rcas_1229 NC_009767.1 1587892 1588788 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_0798 peptidase S1 and S6, chymotrypsin/Hap; peptidase S1 and S6 chymotrypsin/Hap complement(1587892..1588788) Roseiflexus castenholzii DSM 13941 5538698 YP_001431345.1 CDS Rcas_1230 NC_009767.1 1588789 1589700 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_0797 PDZ/DHR/GLGF domain protein; PDZ/DHR/GLGF domain-containing protein complement(1588789..1589700) Roseiflexus castenholzii DSM 13941 5538699 YP_001431346.1 CDS Rcas_1231 NC_009767.1 1589940 1590914 D PFAM: Acetyl xylan esterase; KEGG: rrs:RoseRS_0796 acetyl xylan esterase; Acetyl xylan esterase 1589940..1590914 Roseiflexus castenholzii DSM 13941 5538700 YP_001431347.1 CDS Rcas_1232 NC_009767.1 1591698 1592765 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0795 ABC transporter related; ABC transporter-like protein complement(1591698..1592765) Roseiflexus castenholzii DSM 13941 5538701 YP_001431348.1 CDS Rcas_1233 NC_009767.1 1592815 1594362 R TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_0794 UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramyl tripeptide synthetase complement(1592815..1594362) Roseiflexus castenholzii DSM 13941 5538702 YP_001431349.1 CDS Rcas_1234 NC_009767.1 1594635 1595879 D KEGG: rrs:RoseRS_0793 ABC-type Fe3+ transport system periplasmic component-like protein; Fe3+ ABC transporter periplasmic component-like protein 1594635..1595879 Roseiflexus castenholzii DSM 13941 5538703 YP_001431350.1 CDS Rcas_1235 NC_009767.1 1596285 1597181 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0792 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1596285..1597181 Roseiflexus castenholzii DSM 13941 5538704 YP_001431351.1 CDS Rcas_1236 NC_009767.1 1597184 1597963 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0791 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1597184..1597963 Roseiflexus castenholzii DSM 13941 5538705 YP_001431352.1 CDS Rcas_1237 NC_009767.1 1597974 1599086 D KEGG: rrs:RoseRS_0790 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1597974..1599086 Roseiflexus castenholzii DSM 13941 5538706 YP_001431353.1 CDS Rcas_1238 NC_009767.1 1599050 1600468 R KEGG: rrs:RoseRS_0789 phytoene dehydrogenase and related protein-like protein; phytoene dehydrogenase complement(1599050..1600468) Roseiflexus castenholzii DSM 13941 5538707 YP_001431354.1 CDS Rcas_1239 NC_009767.1 1600628 1601572 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0787 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1600628..1601572 Roseiflexus castenholzii DSM 13941 5538708 YP_001431355.1 CDS Rcas_1240 NC_009767.1 1601586 1603739 R KEGG: rrs:RoseRS_0786 parallel beta-helix repeat; parallel beta-helix repeat-containing protein complement(1601586..1603739) Roseiflexus castenholzii DSM 13941 5538709 YP_001431356.1 CDS Rcas_1241 NC_009767.1 1603981 1605345 D TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_0785 isocitrate dehydrogenase, NADP-dependent; NADP-dependent isocitrate dehydrogenase 1603981..1605345 Roseiflexus castenholzii DSM 13941 5538710 YP_001431357.1 CDS Rcas_1242 NC_009767.1 1605544 1606185 R PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0784 signal-transduction protein with CBS domains; signal-transduction protein complement(1605544..1606185) Roseiflexus castenholzii DSM 13941 5538711 YP_001431358.1 CDS Rcas_1243 NC_009767.1 1606274 1606675 R PFAM: globin; KEGG: rrs:RoseRS_0783 globin; globin complement(1606274..1606675) Roseiflexus castenholzii DSM 13941 5538712 YP_001431359.1 CDS Rcas_1244 NC_009767.1 1606672 1607460 R PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; metalloenzyme domain protein; KEGG: bfs:BF3569 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(1606672..1607460) Roseiflexus castenholzii DSM 13941 5538713 YP_001431360.1 CDS Rcas_1245 NC_009767.1 1607754 1608815 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_0781 PBS lyase heat domain protein repeat-containing protein; PBS lyase complement(1607754..1608815) Roseiflexus castenholzii DSM 13941 5538714 YP_001431361.1 CDS Rcas_1246 NC_009767.1 1610369 1610761 R KEGG: ppd:Ppro_2108 hypothetical protein; hypothetical protein complement(1610369..1610761) Roseiflexus castenholzii DSM 13941 5538718 YP_001431362.1 CDS Rcas_1247 NC_009767.1 1611479 1613590 D PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_0827 glycogen debranching enzyme GlgX; glycoside hydrolase family 13 1611479..1613590 Roseiflexus castenholzii DSM 13941 5538719 YP_001431363.1 CDS Rcas_1248 NC_009767.1 1614239 1614805 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_0491 NUDIX hydrolase; NUDIX hydrolase complement(1614239..1614805) Roseiflexus castenholzii DSM 13941 5538720 YP_001431364.1 CDS Rcas_1249 NC_009767.1 1615082 1615351 R KEGG: rrs:RoseRS_0493 vitamin K epoxide reductase; hypothetical protein complement(1615082..1615351) Roseiflexus castenholzii DSM 13941 5538721 YP_001431365.1 CDS Rcas_1250 NC_009767.1 1615551 1617383 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0494 ABC transporter related; ABC transporter-like protein complement(1615551..1617383) Roseiflexus castenholzii DSM 13941 5538722 YP_001431366.1 CDS Rcas_1251 NC_009767.1 1617715 1619538 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0495 ABC transporter related; cyclic nucleotide-binding protein complement(1617715..1619538) Roseiflexus castenholzii DSM 13941 5538723 YP_001431367.1 CDS Rcas_1252 NC_009767.1 1619834 1620949 R KEGG: rrs:RoseRS_0497 hypothetical protein; hypothetical protein complement(1619834..1620949) Roseiflexus castenholzii DSM 13941 5538724 YP_001431368.1 CDS Rcas_1253 NC_009767.1 1621032 1621799 R TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0498 2-deoxy-D-gluconate 3-dehydrogenase; 2-deoxy-D-gluconate 3-dehydrogenase complement(1621032..1621799) Roseiflexus castenholzii DSM 13941 5538725 YP_001431369.1 CDS Rcas_1254 NC_009767.1 1621796 1622626 R PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rrs:RoseRS_0499 myo-inositol catabolism IolB domain protein; myo-inositol catabolism IolB domain-containing protein complement(1621796..1622626) Roseiflexus castenholzii DSM 13941 5538726 YP_001431370.1 CDS Rcas_1255 NC_009767.1 1623081 1624604 R PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: rrs:RoseRS_0500 domain of unknown function DUF1727; hypothetical protein complement(1623081..1624604) Roseiflexus castenholzii DSM 13941 5538727 YP_001431371.1 CDS Rcas_1256 NC_009767.1 1624620 1625366 R KEGG: rrs:RoseRS_0501 xanthine and CO dehydrogenase maturation factor XdhC/CoxF family-like protein; xanthine and Co dehydrogenase maturation factor complement(1624620..1625366) Roseiflexus castenholzii DSM 13941 5538728 YP_001431372.1 CDS Rcas_1257 NC_009767.1 1625528 1625842 R PFAM: protein of unknown function DUF182; KEGG: rrs:RoseRS_0502 protein of unknown function DUF182; hypothetical protein complement(1625528..1625842) Roseiflexus castenholzii DSM 13941 5538729 YP_001431373.1 CDS Rcas_1258 NC_009767.1 1625866 1627965 R PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; KEGG: rrs:RoseRS_0503 polysaccharide deacetylase; polysaccharide deacetylase complement(1625866..1627965) Roseiflexus castenholzii DSM 13941 5538730 YP_001431374.1 CDS Rcas_1259 NC_009767.1 1629682 1631055 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0506 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1629682..1631055) Roseiflexus castenholzii DSM 13941 5538731 YP_001431375.1 CDS Rcas_1260 NC_009767.1 1631066 1632184 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_0507 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(1631066..1632184) Roseiflexus castenholzii DSM 13941 5538732 YP_001431376.1 CDS Rcas_1261 NC_009767.1 1632189 1632665 R PFAM: protein of unknown function DUF402; KEGG: rrs:RoseRS_0508 protein of unknown function DUF402; hypothetical protein complement(1632189..1632665) Roseiflexus castenholzii DSM 13941 5538733 YP_001431377.1 CDS Rcas_1262 NC_009767.1 1632662 1633360 R PFAM: Methyltransferase type 11; KEGG: rrs:RoseRS_0509 methyltransferase type 11; type 11 methyltransferase complement(1632662..1633360) Roseiflexus castenholzii DSM 13941 5538734 YP_001431378.1 CDS Rcas_1263 NC_009767.1 1633431 1634441 R TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: rrs:RoseRS_0510 cell shape determining protein, MreB/Mrl family; rod shape-determining protein MreB complement(1633431..1634441) Roseiflexus castenholzii DSM 13941 5538735 YP_001431379.1 CDS atpC NC_009767.1 1634607 1635026 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(1634607..1635026) Roseiflexus castenholzii DSM 13941 5538736 YP_001431380.1 CDS Rcas_1265 NC_009767.1 1635033 1636448 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(1635033..1636448) Roseiflexus castenholzii DSM 13941 5538737 YP_001431381.1 CDS Rcas_1266 NC_009767.1 1636476 1637348 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(1636476..1637348) Roseiflexus castenholzii DSM 13941 5538738 YP_001431382.1 CDS Rcas_1267 NC_009767.1 1637561 1639141 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(1637561..1639141) Roseiflexus castenholzii DSM 13941 5538739 YP_001431383.1 CDS Rcas_1268 NC_009767.1 1639184 1639660 R PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: rrs:RoseRS_0515 H+-transporting two-sector ATPase, delta (OSCP) subunit; H+-transporting two-sector ATPase subunit delta complement(1639184..1639660) Roseiflexus castenholzii DSM 13941 5538740 YP_001431384.1 CDS Rcas_1269 NC_009767.1 1639713 1640204 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(1639713..1640204) Roseiflexus castenholzii DSM 13941 5538741 YP_001431385.1 CDS Rcas_1270 NC_009767.1 1640236 1640469 R TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: rrs:RoseRS_0517 ATP synthase F0, C subunit; ATP synthase F0 subunit C complement(1640236..1640469) Roseiflexus castenholzii DSM 13941 5538742 YP_001431386.1 CDS Rcas_1271 NC_009767.1 1640560 1641555 R TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: rrs:RoseRS_0518 ATP synthase F0, A subunit; ATP synthase F0 subunit A complement(1640560..1641555) Roseiflexus castenholzii DSM 13941 5538743 YP_001431387.1 CDS Rcas_1272 NC_009767.1 1641724 1642692 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_0519 response regulator receiver protein; response regulator receiver protein complement(1641724..1642692) Roseiflexus castenholzii DSM 13941 5538744 YP_001431388.1 CDS Rcas_1273 NC_009767.1 1642715 1644385 R PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0520 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(1642715..1644385) Roseiflexus castenholzii DSM 13941 5538745 YP_001431389.1 CDS Rcas_1274 NC_009767.1 1644402 1645547 R KEGG: rrs:RoseRS_0521 hypothetical protein; hypothetical protein complement(1644402..1645547) Roseiflexus castenholzii DSM 13941 5538746 YP_001431390.1 CDS Rcas_1275 NC_009767.1 1646277 1646786 D PFAM: PspC domain protein; KEGG: rrs:RoseRS_0522 phage shock protein C, PspC; phage shock protein PspC 1646277..1646786 Roseiflexus castenholzii DSM 13941 5538747 YP_001431391.1 CDS Rcas_1276 NC_009767.1 1646804 1647322 R PFAM: protein of unknown function DUF165; KEGG: rrs:RoseRS_0523 protein of unknown function DUF165; hypothetical protein complement(1646804..1647322) Roseiflexus castenholzii DSM 13941 5538748 YP_001431392.1 CDS Rcas_1277 NC_009767.1 1647722 1648756 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_0524 alanine racemase; LacI family transcriptional regulator 1647722..1648756 Roseiflexus castenholzii DSM 13941 5538749 YP_001431393.1 CDS Rcas_1278 NC_009767.1 1648778 1649881 D PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0525 ABC transporter related; ABC transporter-like protein 1648778..1649881 Roseiflexus castenholzii DSM 13941 5538750 YP_001431394.1 CDS Rcas_1279 NC_009767.1 1649905 1650288 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_0526 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1649905..1650288 Roseiflexus castenholzii DSM 13941 5538751 YP_001431395.1 CDS Rcas_1280 NC_009767.1 1650439 1652061 R KEGG: rrs:RoseRS_0527 hypothetical protein; hypothetical protein complement(1650439..1652061) Roseiflexus castenholzii DSM 13941 5538752 YP_001431396.1 CDS Rcas_1281 NC_009767.1 1653090 1654382 D KEGG: rrs:RoseRS_0528 hypothetical protein; hypothetical protein 1653090..1654382 Roseiflexus castenholzii DSM 13941 5538753 YP_001431397.1 CDS Rcas_1282 NC_009767.1 1654958 1655797 D SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0529 helix-turn-helix domain protein; XRE family transcriptional regulator 1654958..1655797 Roseiflexus castenholzii DSM 13941 5538754 YP_001431398.1 CDS Rcas_1283 NC_009767.1 1655812 1656309 D PFAM: protein of unknown function DUF520; KEGG: rrs:RoseRS_0530 protein of unknown function DUF520; hypothetical protein 1655812..1656309 Roseiflexus castenholzii DSM 13941 5538755 YP_001431399.1 CDS Rcas_1284 NC_009767.1 1656310 1657758 D KEGG: rrs:RoseRS_0531 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying protein YliG 1656310..1657758 Roseiflexus castenholzii DSM 13941 5538756 YP_001431400.1 CDS Rcas_1285 NC_009767.1 1657795 1658214 R PFAM: Penicillinase repressor; KEGG: rrs:RoseRS_0532 transcriptional repressor, CopY family; CopY family transcriptional regulator complement(1657795..1658214) Roseiflexus castenholzii DSM 13941 5538757 YP_001431401.1 CDS Rcas_1286 NC_009767.1 1658391 1659407 D PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_0533 polyprenyl synthetase; polyprenyl synthetase 1658391..1659407 Roseiflexus castenholzii DSM 13941 5538758 YP_001431402.1 CDS Rcas_1287 NC_009767.1 1659779 1660696 R KEGG: rrs:RoseRS_1002 conserved repeat domain; hypothetical protein complement(1659779..1660696) Roseiflexus castenholzii DSM 13941 5538759 YP_001431403.1 CDS Rcas_1288 NC_009767.1 1660803 1661960 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2179 glycosyl transferase, group 1; group 1 glycosyl transferase 1660803..1661960 Roseiflexus castenholzii DSM 13941 5538760 YP_001431404.1 CDS Rcas_1289 NC_009767.1 1662200 1662547 R KEGG: sru:SRU_2010 transposase, orfB; transposase, orfB complement(1662200..1662547) Roseiflexus castenholzii DSM 13941 5538761 YP_001431405.1 CDS Rcas_1290 NC_009767.1 1662944 1664377 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2180 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter complement(1662944..1664377) Roseiflexus castenholzii DSM 13941 5538762 YP_001431406.1 CDS Rcas_1291 NC_009767.1 1664391 1665740 R KEGG: rrs:RoseRS_2181 GTP-binding protein Era; TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; SMART: AAA ATPase; GTP-binding protein Era complement(1664391..1665740) Roseiflexus castenholzii DSM 13941 5538763 YP_001431407.1 CDS Rcas_1292 NC_009767.1 1665824 1666234 R KEGG: rrs:RoseRS_2182 hypothetical protein; hypothetical protein complement(1665824..1666234) Roseiflexus castenholzii DSM 13941 5538764 YP_001431408.1 CDS Rcas_1293 NC_009767.1 1666295 1667365 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_2183 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(1666295..1667365) Roseiflexus castenholzii DSM 13941 5538765 YP_001431409.1 CDS Rcas_1294 NC_009767.1 1667462 1668355 R KEGG: rrs:RoseRS_2184 hypothetical protein; hypothetical protein complement(1667462..1668355) Roseiflexus castenholzii DSM 13941 5538766 YP_001431410.1 CDS Rcas_1295 NC_009767.1 1668372 1669088 R TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2185 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase complement(1668372..1669088) Roseiflexus castenholzii DSM 13941 5538767 YP_001431411.1 CDS Rcas_1296 NC_009767.1 1669085 1669852 R TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: rrs:RoseRS_2186 transcriptional acitvator, Baf family; Baf family transcriptional activator complement(1669085..1669852) Roseiflexus castenholzii DSM 13941 5538768 YP_001431412.1 CDS Rcas_1297 NC_009767.1 1669867 1670829 R PFAM: Asparaginase/glutaminase; KEGG: rrs:RoseRS_2187 asparaginase/glutaminase; asparaginase/glutaminase complement(1669867..1670829) Roseiflexus castenholzii DSM 13941 5538769 YP_001431413.1 CDS Rcas_1298 NC_009767.1 1670836 1671645 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2188 methyltransferase type 11; type 11 methyltransferase complement(1670836..1671645) Roseiflexus castenholzii DSM 13941 5538770 YP_001431414.1 CDS Rcas_1299 NC_009767.1 1672259 1673239 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2189 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(1672259..1673239) Roseiflexus castenholzii DSM 13941 5538771 YP_001431415.1 CDS Rcas_1300 NC_009767.1 1673372 1679380 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rrs:RoseRS_2190 alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain-containing protein complement(1673372..1679380) Roseiflexus castenholzii DSM 13941 5538772 YP_001431416.1 CDS Rcas_1301 NC_009767.1 1679551 1679886 D PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_2191 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 1679551..1679886 Roseiflexus castenholzii DSM 13941 5538773 YP_001431417.1 CDS Rcas_1302 NC_009767.1 1679867 1680277 D PFAM: HEPN domain protein; KEGG: rrs:RoseRS_2192 HEPN domain protein; HEPN domain-containing protein 1679867..1680277 Roseiflexus castenholzii DSM 13941 5538774 YP_001431418.1 CDS Rcas_1303 NC_009767.1 1680284 1681291 D PFAM: luciferase family protein; KEGG: rxy:Rxyl_0211 luciferase-like protein; luciferase family protein 1680284..1681291 Roseiflexus castenholzii DSM 13941 5538775 YP_001431419.1 CDS Rcas_1304 NC_009767.1 1682693 1683949 R TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2193 nuclease SbcCD, D subunit; nuclease SbcCD subunit D complement(1682693..1683949) Roseiflexus castenholzii DSM 13941 5538776 YP_001431420.1 CDS Rcas_1305 NC_009767.1 1684064 1685188 R KEGG: rrs:RoseRS_4120 hypothetical protein; hypothetical protein complement(1684064..1685188) Roseiflexus castenholzii DSM 13941 5538777 YP_001431421.1 CDS Rcas_1306 NC_009767.1 1685242 1685484 R hypothetical protein complement(1685242..1685484) Roseiflexus castenholzii DSM 13941 5538778 YP_001431422.1 CDS Rcas_1307 NC_009767.1 1685665 1686831 R KEGG: rrs:RoseRS_4118 hypothetical protein; hypothetical protein complement(1685665..1686831) Roseiflexus castenholzii DSM 13941 5538779 YP_001431423.1 CDS Rcas_1308 NC_009767.1 1686875 1687600 R PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_4117 phosphoribosyltransferase; phosphoribosyltransferase complement(1686875..1687600) Roseiflexus castenholzii DSM 13941 5538780 YP_001431424.1 CDS Rcas_1309 NC_009767.1 1688234 1689088 D PFAM: protein of unknown function DUF955; KEGG: chy:CHY_0294 hypothetical protein; hypothetical protein 1688234..1689088 Roseiflexus castenholzii DSM 13941 5538781 YP_001431425.1 CDS Rcas_1310 NC_009767.1 1689098 1689907 D PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_4115 alpha/beta hydrolase fold; alpha/beta hydrolase 1689098..1689907 Roseiflexus castenholzii DSM 13941 5538782 YP_001431426.1 CDS Rcas_1311 NC_009767.1 1692859 1693149 D hypothetical protein 1692859..1693149 Roseiflexus castenholzii DSM 13941 5538783 YP_001431427.1 CDS Rcas_1313 NC_009767.1 1693905 1694480 R KEGG: gvi:gll2576 hypothetical protein; hypothetical protein complement(1693905..1694480) Roseiflexus castenholzii DSM 13941 5538785 YP_001431428.1 CDS Rcas_1314 NC_009767.1 1694470 1694745 R hypothetical protein complement(1694470..1694745) Roseiflexus castenholzii DSM 13941 5538786 YP_001431429.1 CDS Rcas_1315 NC_009767.1 1694977 1695798 R KEGG: sbl:Sbal_1580 DNA methylase N-4/N-6 domain protein; hypothetical protein complement(1694977..1695798) Roseiflexus castenholzii DSM 13941 5538787 YP_001431430.1 CDS Rcas_1316 NC_009767.1 1696025 1696315 D hypothetical protein 1696025..1696315 Roseiflexus castenholzii DSM 13941 5538788 YP_001431431.1 CDS Rcas_1317 NC_009767.1 1696772 1697446 R PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rrs:RoseRS_1921 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase type-1 complement(1696772..1697446) Roseiflexus castenholzii DSM 13941 5538789 YP_001431432.1 CDS Rcas_1318 NC_009767.1 1697452 1697886 R PFAM: UspA domain protein; KEGG: rrs:RoseRS_3672 UspA domain protein; UspA domain-containing protein complement(1697452..1697886) Roseiflexus castenholzii DSM 13941 5538790 YP_001431433.1 CDS Rcas_1319 NC_009767.1 1697904 1700693 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3673 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase complement(1697904..1700693) Roseiflexus castenholzii DSM 13941 5538791 YP_001431434.1 CDS Rcas_1320 NC_009767.1 1700713 1701237 R TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: rrs:RoseRS_3674 NADH-quinone oxidoreductase, E subunit; NADH-quinone oxidoreductase subunit E complement(1700713..1701237) Roseiflexus castenholzii DSM 13941 5538792 YP_001431435.1 CDS Rcas_1321 NC_009767.1 1701264 1702517 R KEGG: rrs:RoseRS_3675 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase I subunit D complement(1701264..1702517) Roseiflexus castenholzii DSM 13941 5538793 YP_001431436.1 CDS Rcas_1322 NC_009767.1 1702524 1703048 R TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rrs:RoseRS_3676 NADH (or F420H2) dehydrogenase, subunit C; NADH (or F420H2) dehydrogenase subunit C complement(1702524..1703048) Roseiflexus castenholzii DSM 13941 5538794 YP_001431437.1 CDS Rcas_1323 NC_009767.1 1703124 1703627 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(1703124..1703627) Roseiflexus castenholzii DSM 13941 5538795 YP_001431438.1 CDS Rcas_1324 NC_009767.1 1703618 1703974 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rrs:RoseRS_3678 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 complement(1703618..1703974) Roseiflexus castenholzii DSM 13941 5538796 YP_001431439.1 CDS Rcas_1325 NC_009767.1 1704067 1704594 R TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylguanine DNA methyltransferase ribonuclease domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rrs:RoseRS_3679 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(1704067..1704594) Roseiflexus castenholzii DSM 13941 5538797 YP_001431440.1 CDS Rcas_1326 NC_009767.1 1704596 1705861 R TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_3680 conserved repeat domain; hypothetical protein complement(1704596..1705861) Roseiflexus castenholzii DSM 13941 5538798 YP_001431441.1 CDS Rcas_1327 NC_009767.1 1706021 1706800 R KEGG: rrs:RoseRS_3681 hypothetical protein; hypothetical protein complement(1706021..1706800) Roseiflexus castenholzii DSM 13941 5538799 YP_001431442.1 CDS Rcas_1328 NC_009767.1 1707040 1708038 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3682 glycosyl transferase, family 2; glycosyl transferase family protein complement(1707040..1708038) Roseiflexus castenholzii DSM 13941 5538800 YP_001431443.1 CDS Rcas_1329 NC_009767.1 1708117 1708569 D KEGG: rrs:RoseRS_3683 hypothetical protein; hypothetical protein 1708117..1708569 Roseiflexus castenholzii DSM 13941 5538801 YP_001431444.1 CDS Rcas_1330 NC_009767.1 1708624 1709070 R PFAM: Septum formation initiator; KEGG: rrs:RoseRS_3684 septum formation initiator; septum formation initiator complement(1708624..1709070) Roseiflexus castenholzii DSM 13941 5538802 YP_001431445.1 CDS Rcas_1331 NC_009767.1 1709281 1709700 R PFAM: protein of unknown function DUF583; KEGG: rrs:RoseRS_3685 protein of unknown function DUF583; hypothetical protein complement(1709281..1709700) Roseiflexus castenholzii DSM 13941 5538803 YP_001431446.1 CDS Rcas_1332 NC_009767.1 1710139 1711035 R KEGG: rrs:RoseRS_3686 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase complement(1710139..1711035) Roseiflexus castenholzii DSM 13941 5538804 YP_001431447.1 CDS Rcas_1333 NC_009767.1 1711121 1711618 D PFAM: carbonic anhydrase; KEGG: rrs:RoseRS_3687 carbonic anhydrase; carbonic anhydrase 1711121..1711618 Roseiflexus castenholzii DSM 13941 5538805 YP_001431448.1 CDS Rcas_1334 NC_009767.1 1712698 1713165 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_3555 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1712698..1713165 Roseiflexus castenholzii DSM 13941 5538806 YP_001431449.1 CDS Rcas_1335 NC_009767.1 1713162 1713773 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3554 protein of unknown function DUF820; hypothetical protein complement(1713162..1713773) Roseiflexus castenholzii DSM 13941 5538807 YP_001431450.1 CDS Rcas_1336 NC_009767.1 1713804 1714415 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3553 protein of unknown function DUF820; hypothetical protein complement(1713804..1714415) Roseiflexus castenholzii DSM 13941 5538808 YP_001431451.1 CDS Rcas_1337 NC_009767.1 1714430 1715368 R PFAM: Acetamidase/Formamidase; KEGG: rrs:RoseRS_3551 acetamidase/formamidase; acetamidase/formamidase complement(1714430..1715368) Roseiflexus castenholzii DSM 13941 5538809 YP_001431452.1 CDS Rcas_1338 NC_009767.1 1715938 1717185 D PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3550 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1715938..1717185 Roseiflexus castenholzii DSM 13941 5538810 YP_001431453.1 CDS Rcas_1339 NC_009767.1 1717106 1717822 R PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_3549 ICC-like phosphoesterase-like protein; metallophosphoesterase complement(1717106..1717822) Roseiflexus castenholzii DSM 13941 5538811 YP_001431454.1 CDS Rcas_1340 NC_009767.1 1717866 1718111 D hypothetical protein 1717866..1718111 Roseiflexus castenholzii DSM 13941 5538812 YP_001431455.1 CDS Rcas_1341 NC_009767.1 1718232 1718672 D PFAM: membrane protein of unknown function; KEGG: rrs:RoseRS_3547 membrane protein of unknown function; hypothetical protein 1718232..1718672 Roseiflexus castenholzii DSM 13941 5538813 YP_001431456.1 CDS Rcas_1342 NC_009767.1 1718879 1720888 D PFAM: protein of unknown function DUF1680; KEGG: rrs:RoseRS_3545 protein of unknown function DUF1680; hypothetical protein 1718879..1720888 Roseiflexus castenholzii DSM 13941 5538814 YP_001431457.1 CDS Rcas_1343 NC_009767.1 1720867 1721508 R PFAM: protein of unknown function DUF218; KEGG: rrs:RoseRS_4260 protein of unknown function DUF218; hypothetical protein complement(1720867..1721508) Roseiflexus castenholzii DSM 13941 5538815 YP_001431458.1 CDS Rcas_1344 NC_009767.1 1721849 1722529 R KEGG: rrs:RoseRS_4261 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(1721849..1722529) Roseiflexus castenholzii DSM 13941 5538816 YP_001431459.1 CDS Rcas_1345 NC_009767.1 1722526 1723146 R PFAM: sugar transferase; KEGG: rrs:RoseRS_4262 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase complement(1722526..1723146) Roseiflexus castenholzii DSM 13941 5538817 YP_001431460.1 CDS Rcas_1346 NC_009767.1 1723151 1724350 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4263 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1723151..1724350) Roseiflexus castenholzii DSM 13941 5538818 YP_001431461.1 CDS Rcas_1347 NC_009767.1 1724347 1725450 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4264 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1724347..1725450) Roseiflexus castenholzii DSM 13941 5538819 YP_001431462.1 CDS Rcas_1348 NC_009767.1 1725458 1726393 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4265 glycosyl transferase, family 2; glycosyl transferase family protein complement(1725458..1726393) Roseiflexus castenholzii DSM 13941 5538820 YP_001431463.1 CDS Rcas_1349 NC_009767.1 1726372 1727556 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4266 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1726372..1727556) Roseiflexus castenholzii DSM 13941 5538821 YP_001431464.1 CDS Rcas_1350 NC_009767.1 1727541 1728761 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4267 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1727541..1728761) Roseiflexus castenholzii DSM 13941 5538822 YP_001431465.1 CDS Rcas_1351 NC_009767.1 1728765 1730111 R PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_4268 O-antigen polymerase; O-antigen polymerase complement(1728765..1730111) Roseiflexus castenholzii DSM 13941 5538823 YP_001431466.1 CDS Rcas_1352 NC_009767.1 1730080 1731354 R PFAM: polysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4269 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(1730080..1731354) Roseiflexus castenholzii DSM 13941 5538824 YP_001431467.1 CDS Rcas_1353 NC_009767.1 1731400 1733274 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4270 non-specific protein-tyrosine kinase; non-specific protein-tyrosine kinase complement(1731400..1733274) Roseiflexus castenholzii DSM 13941 5538825 YP_001431468.1 CDS Rcas_1354 NC_009767.1 1733428 1733889 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_4271 response regulator receiver protein; response regulator receiver protein complement(1733428..1733889) Roseiflexus castenholzii DSM 13941 5538826 YP_001431469.1 CDS Rcas_1355 NC_009767.1 1734503 1735195 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4275 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(1734503..1735195) Roseiflexus castenholzii DSM 13941 5538827 YP_001431470.1 CDS Rcas_1356 NC_009767.1 1735247 1736095 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_4276 histidine kinase; histidine kinase complement(1735247..1736095) Roseiflexus castenholzii DSM 13941 5538828 YP_001431471.1 CDS Rcas_1357 NC_009767.1 1736248 1736955 R TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_4170 sortase family protein; sortase family protein complement(1736248..1736955) Roseiflexus castenholzii DSM 13941 5538829 YP_001431472.1 CDS Rcas_1358 NC_009767.1 1736952 1737503 R KEGG: rrs:RoseRS_4169 hypothetical protein; hypothetical protein complement(1736952..1737503) Roseiflexus castenholzii DSM 13941 5538830 YP_001431473.1 CDS Rcas_1359 NC_009767.1 1737500 1738501 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4168 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(1737500..1738501) Roseiflexus castenholzii DSM 13941 5538831 YP_001431474.1 CDS Rcas_1360 NC_009767.1 1738511 1740442 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_4167 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD complement(1738511..1740442) Roseiflexus castenholzii DSM 13941 5538832 YP_001431475.1 CDS Rcas_1361 NC_009767.1 1740439 1741662 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rrs:RoseRS_4166 DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase complement(1740439..1741662) Roseiflexus castenholzii DSM 13941 5538833 YP_001431476.1 CDS Rcas_1362 NC_009767.1 1741762 1742727 R KEGG: aor:AO090103000466 predicted protein Pfam: Cytadhesin_P30 DUF1407 Collagen PROSITE: ASN_RICH GLY_RICH PRO_RICH SER_RICH THR_RICH; hypothetical protein complement(1741762..1742727) Roseiflexus castenholzii DSM 13941 5538834 YP_001431477.1 CDS Rcas_1363 NC_009767.1 1742779 1745697 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_3544 von Willebrand factor, type A; von Willebrand factor type A complement(1742779..1745697) Roseiflexus castenholzii DSM 13941 5538835 YP_001431478.1 CDS Rcas_1364 NC_009767.1 1745851 1746372 D with HoxF and HoxU catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution; bidirectional hydrogenase complex protein HoxE 1745851..1746372 Roseiflexus castenholzii DSM 13941 5538836 YP_001431479.1 CDS Rcas_1365 NC_009767.1 1746535 1748133 D PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: rrs:RoseRS_3542 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 1746535..1748133 Roseiflexus castenholzii DSM 13941 5538837 YP_001431480.1 CDS Rcas_1366 NC_009767.1 1748157 1748864 D with HoxF and HoxE catalyzes H2-dependent NAD(P)+-reduction as well as NAD(P)H-dependent H2-evolution; bidirectional hydrogenase complex protein HoxU 1748157..1748864 Roseiflexus castenholzii DSM 13941 5538838 YP_001431481.1 CDS Rcas_1367 NC_009767.1 1748985 1749530 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rrs:RoseRS_3540 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1748985..1749530 Roseiflexus castenholzii DSM 13941 5538839 YP_001431482.1 CDS Rcas_1368 NC_009767.1 1749542 1750969 D PFAM: nickel-dependent hydrogenase large subunit; KEGG: rrs:RoseRS_3539 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 1749542..1750969 Roseiflexus castenholzii DSM 13941 5538840 YP_001431483.1 CDS Rcas_1369 NC_009767.1 1751294 1751737 D KEGG: rrs:RoseRS_3538 hypothetical protein; hypothetical protein 1751294..1751737 Roseiflexus castenholzii DSM 13941 5538841 YP_001431484.1 CDS Rcas_1370 NC_009767.1 1752979 1753290 D hypothetical protein 1752979..1753290 Roseiflexus castenholzii DSM 13941 5538842 YP_001431485.1 CDS Rcas_1371 NC_009767.1 1753486 1754313 D KEGG: rrs:RoseRS_3537 protein-disulfide isomerase-like protein; protein-disulfide isomerase-like protein 1753486..1754313 Roseiflexus castenholzii DSM 13941 5538843 YP_001431486.1 CDS Rcas_1372 NC_009767.1 1754505 1756472 D KEGG: rrs:RoseRS_3536 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein 1754505..1756472 Roseiflexus castenholzii DSM 13941 5538844 YP_001431487.1 CDS Rcas_1373 NC_009767.1 1756907 1757128 D KEGG: rrs:RoseRS_3535 hypothetical protein; hypothetical protein 1756907..1757128 Roseiflexus castenholzii DSM 13941 5538845 YP_001431488.1 CDS Rcas_1374 NC_009767.1 1757572 1757913 D KEGG: rrs:RoseRS_3534 hypothetical protein; hypothetical protein 1757572..1757913 Roseiflexus castenholzii DSM 13941 5538847 YP_001431489.1 CDS Rcas_1375 NC_009767.1 1757944 1760070 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_3533 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1757944..1760070 Roseiflexus castenholzii DSM 13941 5538848 YP_001431490.1 CDS Rcas_1376 NC_009767.1 1760063 1760320 D KEGG: rrs:RoseRS_3532 hypothetical protein; hypothetical protein 1760063..1760320 Roseiflexus castenholzii DSM 13941 5538849 YP_001431491.1 CDS Rcas_1377 NC_009767.1 1760338 1762095 D PFAM: Dynamin family protein; GTP-binding protein HSR1-related; Miro domain protein; KEGG: rrs:RoseRS_3531 dynamin family protein; dynamin family protein 1760338..1762095 Roseiflexus castenholzii DSM 13941 5538850 YP_001431492.1 CDS Rcas_1378 NC_009767.1 1762095 1762937 D PFAM: protein of unknown function DUF62; KEGG: rrs:RoseRS_3530 protein of unknown function DUF62; hypothetical protein 1762095..1762937 Roseiflexus castenholzii DSM 13941 5538851 YP_001431493.1 CDS Rcas_1379 NC_009767.1 1763280 1765358 D PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: rrs:RoseRS_3529 serine protein kinase, PrkA; serine protein kinase PrkA 1763280..1765358 Roseiflexus castenholzii DSM 13941 5538852 YP_001431494.1 CDS Rcas_1380 NC_009767.1 1765543 1766652 D PFAM: protein of unknown function DUF444; KEGG: rrs:RoseRS_3528 protein of unknown function DUF444; hypothetical protein 1765543..1766652 Roseiflexus castenholzii DSM 13941 5538853 YP_001431495.1 CDS Rcas_1381 NC_009767.1 1766672 1769368 D PFAM: SpoVR family protein; SMART: Hedgehog/intein hint domain protein; KEGG: rrs:RoseRS_3527 SpoVR family protein; SpoVR family protein 1766672..1769368 Roseiflexus castenholzii DSM 13941 5538854 YP_001431496.1 CDS Rcas_1382 NC_009767.1 1769390 1769923 D KEGG: rrs:RoseRS_3526 hypothetical protein; hypothetical protein 1769390..1769923 Roseiflexus castenholzii DSM 13941 5538855 YP_001431497.1 CDS Rcas_1383 NC_009767.1 1769927 1770796 D TIGRFAM: modification methylase, HemK family; PFAM: RNA methylase; methyltransferase small; ribosomal L11 methyltransferase; Methyltransferase type 12; KEGG: rrs:RoseRS_3525 modification methylase, HemK family; HemK family modification methylase 1769927..1770796 Roseiflexus castenholzii DSM 13941 5538856 YP_001431498.1 CDS Rcas_1384 NC_009767.1 1770944 1772140 R KEGG: rrs:RoseRS_4114 hypothetical protein; hypothetical protein complement(1770944..1772140) Roseiflexus castenholzii DSM 13941 5538857 YP_001431499.1 CDS Rcas_1385 NC_009767.1 1772144 1773418 R PFAM: glycoside hydrolase family 4; KEGG: rrs:RoseRS_4113 glycoside hydrolase, family 4; glycoside hydrolase family protein complement(1772144..1773418) Roseiflexus castenholzii DSM 13941 5538858 YP_001431500.1 CDS Rcas_1386 NC_009767.1 1773483 1774448 R PFAM: 3-dehydroquinate synthase; KEGG: rrs:RoseRS_4112 3-dehydroquinate synthase; 3-dehydroquinate synthase complement(1773483..1774448) Roseiflexus castenholzii DSM 13941 5538859 YP_001431501.1 CDS Rcas_1387 NC_009767.1 1774448 1774858 R PFAM: DNA mismatch endonuclease vsr; KEGG: rrs:RoseRS_4111 DNA mismatch endonuclease vsr; DNA mismatch endonuclease vsr complement(1774448..1774858) Roseiflexus castenholzii DSM 13941 5538860 YP_001431502.1 CDS Rcas_1388 NC_009767.1 1774862 1775731 R KEGG: rrs:RoseRS_4110 hypothetical protein; hypothetical protein complement(1774862..1775731) Roseiflexus castenholzii DSM 13941 5538861 YP_001431503.1 CDS Rcas_1389 NC_009767.1 1775718 1776881 R TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: rrs:RoseRS_4109 DNA-cytosine methyltransferase; DNA-cytosine methyltransferase complement(1775718..1776881) Roseiflexus castenholzii DSM 13941 5538862 YP_001431504.1 CDS Rcas_1390 NC_009767.1 1777005 1778945 R hypothetical protein complement(1777005..1778945) Roseiflexus castenholzii DSM 13941 5538863 YP_001431505.1 CDS Rcas_1392 NC_009767.1 1779649 1780311 R modulates transcription in response to the NADH/NAD(+) redox state; redox-sensing transcriptional repressor Rex complement(1779649..1780311) Roseiflexus castenholzii DSM 13941 5538865 YP_001431506.1 CDS Rcas_1393 NC_009767.1 1780435 1782723 R KEGG: rrs:RoseRS_2213 hypothetical protein; hypothetical protein complement(1780435..1782723) Roseiflexus castenholzii DSM 13941 5538866 YP_001431507.1 CDS Rcas_1394 NC_009767.1 1782704 1784017 R KEGG: rrs:RoseRS_2212 hypothetical protein; hypothetical protein complement(1782704..1784017) Roseiflexus castenholzii DSM 13941 5538867 YP_001431508.1 CDS Rcas_1395 NC_009767.1 1784017 1785867 R KEGG: rrs:RoseRS_2211 type IV secretory pathway VirB4 components-like protein; type IV secretory pathway VirB4 components-like protein complement(1784017..1785867) Roseiflexus castenholzii DSM 13941 5538868 YP_001431509.1 CDS Rcas_1396 NC_009767.1 1785874 1786548 R KEGG: rrs:RoseRS_2210 hypothetical protein; hypothetical protein complement(1785874..1786548) Roseiflexus castenholzii DSM 13941 5538869 YP_001431510.1 CDS Rcas_1397 NC_009767.1 1786541 1786930 R KEGG: rrs:RoseRS_2209 hypothetical protein; hypothetical protein complement(1786541..1786930) Roseiflexus castenholzii DSM 13941 5538870 YP_001431511.1 CDS Rcas_1398 NC_009767.1 1786950 1787249 R KEGG: rrs:RoseRS_2208 hypothetical protein; hypothetical protein complement(1786950..1787249) Roseiflexus castenholzii DSM 13941 5538871 YP_001431512.1 CDS Rcas_1399 NC_009767.1 1787307 1790144 R PFAM: peptidase M23B; KEGG: rrs:RoseRS_2207 hypothetical protein; peptidase M23B complement(1787307..1790144) Roseiflexus castenholzii DSM 13941 5538872 YP_001431513.1 CDS Rcas_1400 NC_009767.1 1790141 1792669 R KEGG: rrs:RoseRS_2206 hypothetical protein; hypothetical protein complement(1790141..1792669) Roseiflexus castenholzii DSM 13941 5538873 YP_001431514.1 CDS Rcas_1401 NC_009767.1 1792711 1793409 R KEGG: rrs:RoseRS_2205 hypothetical protein; hypothetical protein complement(1792711..1793409) Roseiflexus castenholzii DSM 13941 5538874 YP_001431515.1 CDS Rcas_1402 NC_009767.1 1793426 1794217 R KEGG: rrs:RoseRS_2204 hypothetical protein; hypothetical protein complement(1793426..1794217) Roseiflexus castenholzii DSM 13941 5538875 YP_001431516.1 CDS Rcas_1403 NC_009767.1 1794239 1795189 R KEGG: rrs:RoseRS_2203 hypothetical protein; hypothetical protein complement(1794239..1795189) Roseiflexus castenholzii DSM 13941 5538876 YP_001431517.1 CDS Rcas_1404 NC_009767.1 1795202 1797259 R PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_2202 type II secretion system protein E; type II secretion system protein E complement(1795202..1797259) Roseiflexus castenholzii DSM 13941 5538877 YP_001431518.1 CDS Rcas_1405 NC_009767.1 1797641 1798891 R KEGG: rrs:RoseRS_2201 ATPase involved in chromosome partitioning-like protein; chromosome partitioning ATPase complement(1797641..1798891) Roseiflexus castenholzii DSM 13941 5538878 YP_001431519.1 CDS Rcas_1406 NC_009767.1 1798922 1800178 R PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_2200 type II secretion system protein E; type II secretion system protein E complement(1798922..1800178) Roseiflexus castenholzii DSM 13941 5538879 YP_001431520.1 CDS Rcas_1407 NC_009767.1 1800232 1801128 R PFAM: SAF domain protein; KEGG: rrs:RoseRS_2199 SAF domain; SAF domain-containing protein complement(1800232..1801128) Roseiflexus castenholzii DSM 13941 5538880 YP_001431521.1 CDS Rcas_1408 NC_009767.1 1801164 1801688 R KEGG: rrs:RoseRS_2198 hypothetical protein; hypothetical protein complement(1801164..1801688) Roseiflexus castenholzii DSM 13941 5538881 YP_001431522.1 CDS Rcas_1409 NC_009767.1 1801707 1802360 R PFAM: TadE family protein; KEGG: rrs:RoseRS_2197 TadE family protein; TadE family protein complement(1801707..1802360) Roseiflexus castenholzii DSM 13941 5538882 YP_001431523.1 CDS Rcas_1410 NC_009767.1 1802421 1805537 R TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_2196 conserved repeat domain; hypothetical protein complement(1802421..1805537) Roseiflexus castenholzii DSM 13941 5538883 YP_001431524.1 CDS Rcas_1411 NC_009767.1 1805571 1806200 R KEGG: rrs:RoseRS_2194 hypothetical protein; hypothetical protein complement(1805571..1806200) Roseiflexus castenholzii DSM 13941 5538884 YP_001431525.1 CDS Rcas_1412 NC_009767.1 1806259 1807482 R PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_2195 allergen V5/TPX-1 family protein; SCP-like extracellular complement(1806259..1807482) Roseiflexus castenholzii DSM 13941 5538885 YP_001431526.1 CDS Rcas_1413 NC_009767.1 1808522 1809289 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3977 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase complement(1808522..1809289) Roseiflexus castenholzii DSM 13941 5538886 YP_001431527.1 CDS Rcas_1414 NC_009767.1 1809286 1809555 R KEGG: rrs:RoseRS_3976 hypothetical protein; hypothetical protein complement(1809286..1809555) Roseiflexus castenholzii DSM 13941 5538887 YP_001431528.1 CDS Rcas_1415 NC_009767.1 1809566 1810666 R PFAM: Methicillin resistance protein; KEGG: rrs:RoseRS_3975 methicillin resistance protein; methicillin resistance protein complement(1809566..1810666) Roseiflexus castenholzii DSM 13941 5538888 YP_001431529.1 CDS Rcas_1416 NC_009767.1 1810651 1811469 R PFAM: LmbE family protein; KEGG: rrs:RoseRS_3974 LmbE family protein; LmbE family protein complement(1810651..1811469) Roseiflexus castenholzii DSM 13941 5538889 YP_001431530.1 CDS Rcas_1417 NC_009767.1 1811833 1812762 R PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_3973 PBS lyase heat domain protein repeat-containing protein; PBS lyase complement(1811833..1812762) Roseiflexus castenholzii DSM 13941 5538890 YP_001431531.1 CDS Rcas_1418 NC_009767.1 1812775 1814649 R KEGG: rrs:RoseRS_3972 hypothetical protein; hypothetical protein complement(1812775..1814649) Roseiflexus castenholzii DSM 13941 5538891 YP_001431532.1 CDS Rcas_1419 NC_009767.1 1814646 1814801 R KEGG: rrs:RoseRS_3971 hypothetical protein; hypothetical protein complement(1814646..1814801) Roseiflexus castenholzii DSM 13941 5538892 YP_001431533.1 CDS Rcas_1420 NC_009767.1 1815090 1816184 D KEGG: mba:Mbar_A1776 magnesium-chelatase subunit; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase 1815090..1816184 Roseiflexus castenholzii DSM 13941 5538893 YP_001431534.1 CDS Rcas_1421 NC_009767.1 1816181 1817170 D PFAM: von Willebrand factor type A; KEGG: mac:MA0877 magnesium-chelatase subunit; von Willebrand factor A 1816181..1817170 Roseiflexus castenholzii DSM 13941 5538894 YP_001431535.1 CDS Rcas_1422 NC_009767.1 1817226 1818737 D PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_3968 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 1817226..1818737 Roseiflexus castenholzii DSM 13941 5538895 YP_001431536.1 CDS Rcas_1423 NC_009767.1 1818912 1819085 D PFAM: ribosomal protein L34; KEGG: rrs:RoseRS_3967 ribosomal protein L34; 50S ribosomal protein L34 1818912..1819085 Roseiflexus castenholzii DSM 13941 5538896 YP_001431537.1 CDS Rcas_1424 NC_009767.1 1819149 1819517 D TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rrs:RoseRS_3966 ribonuclease P protein component; ribonuclease P protein component 1819149..1819517 Roseiflexus castenholzii DSM 13941 5538897 YP_001431538.1 CDS Rcas_1425 NC_009767.1 1819546 1820715 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: cje:Cj0208 DNA modification methylase (adenine-specific methyltransferase); adenine-specific DNA methyltransferase 1819546..1820715 Roseiflexus castenholzii DSM 13941 5538898 YP_001431539.1 CDS Rcas_1426 NC_009767.1 1821040 1821429 D hypothetical protein 1821040..1821429 Roseiflexus castenholzii DSM 13941 5538899 YP_001431540.1 CDS Rcas_1427 NC_009767.1 1821565 1822602 D PFAM: 60 kDa inner membrane insertion protein; KEGG: rrs:RoseRS_3965 60 kDa inner membrane insertion protein; hypothetical protein 1821565..1822602 Roseiflexus castenholzii DSM 13941 5538900 YP_001431541.1 CDS Rcas_1428 NC_009767.1 1822682 1823371 D PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: rrs:RoseRS_3964 single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein 1822682..1823371 Roseiflexus castenholzii DSM 13941 5538901 YP_001431542.1 CDS Rcas_1429 NC_009767.1 1823446 1824264 D PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3963 PfkB domain protein; ribokinase-like domain-containing protein 1823446..1824264 Roseiflexus castenholzii DSM 13941 5538902 YP_001431543.1 CDS Rcas_1430 NC_009767.1 1825457 1826299 R KEGG: rrs:RoseRS_1027 hypothetical protein; hypothetical protein complement(1825457..1826299) Roseiflexus castenholzii DSM 13941 5538903 YP_001431544.1 CDS Rcas_1431 NC_009767.1 1826299 1826952 R PFAM: TENA/THI-4 domain protein; KEGG: rrs:RoseRS_1028 transcriptional activator, TenA family; TenA family transcription regulator complement(1826299..1826952) Roseiflexus castenholzii DSM 13941 5538904 YP_001431545.1 CDS Rcas_1432 NC_009767.1 1827261 1828049 R KEGG: rrs:RoseRS_1030 hypothetical protein; hypothetical protein complement(1827261..1828049) Roseiflexus castenholzii DSM 13941 5538905 YP_001431546.1 CDS Rcas_1433 NC_009767.1 1828275 1829063 R KEGG: rrs:RoseRS_1029 hypothetical protein; hypothetical protein complement(1828275..1829063) Roseiflexus castenholzii DSM 13941 5538906 YP_001431547.1 CDS Rcas_1434 NC_009767.1 1829171 1829848 D TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: rrs:RoseRS_1032 translation initiation factor IF-3; translation initiation factor IF-3 1829171..1829848 Roseiflexus castenholzii DSM 13941 5538907 YP_001431548.1 CDS Rcas_1435 NC_009767.1 1829862 1830065 D PFAM: ribosomal protein L35; KEGG: rrs:RoseRS_1033 ribosomal protein L35; 50S ribosomal protein L35 1829862..1830065 Roseiflexus castenholzii DSM 13941 5538908 YP_001431549.1 CDS rplT NC_009767.1 1830102 1830455 D binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1830102..1830455 Roseiflexus castenholzii DSM 13941 5538909 YP_001431550.1 CDS Rcas_1437 NC_009767.1 1830533 1831240 D PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_1035 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 1830533..1831240 Roseiflexus castenholzii DSM 13941 5538910 YP_001431551.1 CDS pheS NC_009767.1 1831677 1832720 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1831677..1832720 Roseiflexus castenholzii DSM 13941 5538911 YP_001431552.1 CDS Rcas_1439 NC_009767.1 1832720 1834552 D KEGG: rrs:RoseRS_1037 hypothetical protein; hypothetical protein 1832720..1834552 Roseiflexus castenholzii DSM 13941 5538912 YP_001431553.1 CDS pheT NC_009767.1 1834562 1837063 D catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1834562..1837063 Roseiflexus castenholzii DSM 13941 5538913 YP_001431554.1 CDS Rcas_1441 NC_009767.1 1837550 1838569 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein 1837550..1838569 Roseiflexus castenholzii DSM 13941 5538914 YP_001431555.1 CDS Rcas_1442 NC_009767.1 1839113 1840699 R KEGG: rrs:RoseRS_2177 RNA polymerase, sigma 28 subunit, FliA/WhiG family; FliA/WhiG family RNA polymerase sigma 28 subunit complement(1839113..1840699) Roseiflexus castenholzii DSM 13941 5538915 YP_001431556.1 CDS Rcas_1443 NC_009767.1 1841175 1843607 R KEGG: rrs:RoseRS_2176 hypothetical protein; hypothetical protein complement(1841175..1843607) Roseiflexus castenholzii DSM 13941 5538916 YP_001431557.1 CDS Rcas_1444 NC_009767.1 1843952 1844203 R KEGG: rrs:RoseRS_2176 hypothetical protein; hypothetical protein complement(1843952..1844203) Roseiflexus castenholzii DSM 13941 5538917 YP_001431558.1 CDS Rcas_1445 NC_009767.1 1844613 1846547 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_2175 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(1844613..1846547) Roseiflexus castenholzii DSM 13941 5538918 YP_001431559.1 CDS Rcas_1446 NC_009767.1 1847318 1848025 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: rrs:RoseRS_3071 uncharacterized peroxidase-related enzyme; peroxidase-like protein complement(1847318..1848025) Roseiflexus castenholzii DSM 13941 5538920 YP_001431560.1 CDS Rcas_1447 NC_009767.1 1848921 1849778 R KEGG: rrs:RoseRS_2170 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein complement(1848921..1849778) Roseiflexus castenholzii DSM 13941 5538921 YP_001431561.1 CDS Rcas_1448 NC_009767.1 1849876 1851570 D KEGG: rrs:RoseRS_2169 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1849876..1851570 Roseiflexus castenholzii DSM 13941 5538922 YP_001431562.1 CDS Rcas_1449 NC_009767.1 1851785 1852102 D hypothetical protein 1851785..1852102 Roseiflexus castenholzii DSM 13941 5538923 YP_001431563.1 CDS Rcas_1450 NC_009767.1 1852364 1852885 D PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_2168 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 1852364..1852885 Roseiflexus castenholzii DSM 13941 5538924 YP_001431564.1 CDS Rcas_1451 NC_009767.1 1852864 1853697 R KEGG: rrs:RoseRS_2167 hypothetical protein; hypothetical protein complement(1852864..1853697) Roseiflexus castenholzii DSM 13941 5538925 YP_001431565.1 CDS Rcas_1452 NC_009767.1 1853846 1854736 D PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rrs:RoseRS_2166 ATPase associated with various cellular activities, AAA_5; ATPase 1853846..1854736 Roseiflexus castenholzii DSM 13941 5538926 YP_001431566.1 CDS Rcas_1453 NC_009767.1 1854756 1855979 D PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_2165 VWA containing CoxE family protein; von Willebrand factor A 1854756..1855979 Roseiflexus castenholzii DSM 13941 5538927 YP_001431567.1 CDS Rcas_1454 NC_009767.1 1856216 1857385 D SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_4005 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1856216..1857385 Roseiflexus castenholzii DSM 13941 5538928 YP_001431568.1 CDS Rcas_1455 NC_009767.1 1857734 1858924 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4004 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 1857734..1858924 Roseiflexus castenholzii DSM 13941 5538929 YP_001431569.1 CDS Rcas_1456 NC_009767.1 1858927 1860138 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_4003 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 1858927..1860138 Roseiflexus castenholzii DSM 13941 5538930 YP_001431570.1 CDS Rcas_1457 NC_009767.1 1860146 1860907 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4002 ABC transporter related; ABC transporter-like protein 1860146..1860907 Roseiflexus castenholzii DSM 13941 5538931 YP_001431571.1 CDS Rcas_1458 NC_009767.1 1861003 1861383 R KEGG: rrs:RoseRS_4001 hypothetical protein; hypothetical protein complement(1861003..1861383) Roseiflexus castenholzii DSM 13941 5538932 YP_001431572.1 CDS Rcas_1459 NC_009767.1 1861819 1862832 D PFAM: cytochrome oxidase assembly; KEGG: rrs:RoseRS_4134 cytochrome oxidase assembly; cytochrome oxidase assembly 1861819..1862832 Roseiflexus castenholzii DSM 13941 5538933 YP_001431573.1 CDS Rcas_1460 NC_009767.1 1862905 1863330 R KEGG: rrs:RoseRS_4136 hypothetical protein; hypothetical protein complement(1862905..1863330) Roseiflexus castenholzii DSM 13941 5538934 YP_001431574.1 CDS Rcas_1461 NC_009767.1 1863351 1864250 D TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_4137 arginase; arginase 1863351..1864250 Roseiflexus castenholzii DSM 13941 5538935 YP_001431575.1 CDS Rcas_1462 NC_009767.1 1864782 1865462 D KEGG: rrs:RoseRS_4139 hypothetical protein; hypothetical protein 1864782..1865462 Roseiflexus castenholzii DSM 13941 5538936 YP_001431576.1 CDS Rcas_1463 NC_009767.1 1865472 1868504 D KEGG: rrs:RoseRS_4140 Fe-S-cluster-containing hydrogenase components 1-like protein; Fe-S-cluster-containing hydrogenase components 1-like protein 1865472..1868504 Roseiflexus castenholzii DSM 13941 5538937 YP_001431577.1 CDS Rcas_1464 NC_009767.1 1868577 1869992 D PFAM: Polysulphide reductase NrfD; KEGG: rrs:RoseRS_4141 polysulphide reductase, NrfD; polysulfide reductase NrfD 1868577..1869992 Roseiflexus castenholzii DSM 13941 5538938 YP_001431578.1 CDS Rcas_1465 NC_009767.1 1870006 1870584 D KEGG: rrs:RoseRS_4142 hypothetical protein; hypothetical protein 1870006..1870584 Roseiflexus castenholzii DSM 13941 5538939 YP_001431579.1 CDS Rcas_1466 NC_009767.1 1870595 1871176 D KEGG: rrs:RoseRS_4143 hypothetical protein; hypothetical protein 1870595..1871176 Roseiflexus castenholzii DSM 13941 5538940 YP_001431580.1 CDS Rcas_1467 NC_009767.1 1871282 1872526 D KEGG: rrs:RoseRS_4144 hypothetical protein; hypothetical protein 1871282..1872526 Roseiflexus castenholzii DSM 13941 5538941 YP_001431581.1 CDS Rcas_1468 NC_009767.1 1873739 1874152 D PFAM: transposase IS200-family protein; KEGG: rrs:RoseRS_0733 transposase IS200-family protein; transposase IS200-family protein 1873739..1874152 Roseiflexus castenholzii DSM 13941 5538942 YP_001431582.1 CDS Rcas_1469 NC_009767.1 1875883 1878294 R PFAM: peptidase S45 penicillin amidase; KEGG: gvi:glr1988 probable penicillin amidase; peptidase S45 penicillin amidase complement(1875883..1878294) Roseiflexus castenholzii DSM 13941 5538943 YP_001431583.1 CDS Rcas_1470 NC_009767.1 1879392 1879682 D TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rpb:RPB_0452 prevent-host-death protein; prevent-host-death family protein 1879392..1879682 Roseiflexus castenholzii DSM 13941 5538944 YP_001431584.1 CDS Rcas_1471 NC_009767.1 1879750 1880091 D KEGG: rsh:Rsph17029_2024 transposase IS3/IS911 family protein; hypothetical protein 1879750..1880091 Roseiflexus castenholzii DSM 13941 5538945 YP_001431585.1 CDS Rcas_1473 NC_009767.1 1881414 1881695 R hypothetical protein complement(1881414..1881695) Roseiflexus castenholzii DSM 13941 5538947 YP_001431586.1 CDS Rcas_1474 NC_009767.1 1882751 1883647 R KEGG: rrs:RoseRS_3664 methylthioadenosine phosphorylase; TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine phosphorylase family 2; methylthioadenosine phosphorylase complement(1882751..1883647) Roseiflexus castenholzii DSM 13941 5538949 YP_001431587.1 CDS clpX NC_009767.1 1883666 1884976 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1883666..1884976) Roseiflexus castenholzii DSM 13941 5538950 YP_001431588.1 CDS Rcas_1476 NC_009767.1 1884995 1885654 R PFAM: peptidase S14 ClpP; KEGG: rrs:RoseRS_3662 endopeptidase Clp; endopeptidase Clp complement(1884995..1885654) Roseiflexus castenholzii DSM 13941 5538951 YP_001431589.1 CDS Rcas_1477 NC_009767.1 1885660 1887180 R TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: rrs:RoseRS_3661 trigger factor; trigger factor complement(1885660..1887180) Roseiflexus castenholzii DSM 13941 5538952 YP_001431590.1 CDS Rcas_1478 NC_009767.1 1887478 1891218 D KEGG: rrs:RoseRS_3660 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 1887478..1891218 Roseiflexus castenholzii DSM 13941 5538953 YP_001431591.1 CDS Rcas_1479 NC_009767.1 1891290 1893005 R PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3659 protein kinase; serine/threonine protein kinase complement(1891290..1893005) Roseiflexus castenholzii DSM 13941 5538954 YP_001431592.1 CDS Rcas_1480 NC_009767.1 1893169 1893834 D PFAM: Forkhead-associated protein; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3658 two component transcriptional regulator, winged helix family; winged helix family two component response transcriptional regulator 1893169..1893834 Roseiflexus castenholzii DSM 13941 5538955 YP_001431593.1 CDS Rcas_1481 NC_009767.1 1893908 1895203 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1893908..1895203 Roseiflexus castenholzii DSM 13941 5538956 YP_001431594.1 CDS Rcas_1482 NC_009767.1 1895311 1895901 D KEGG: rrs:RoseRS_3656 hypothetical protein; hypothetical protein 1895311..1895901 Roseiflexus castenholzii DSM 13941 5538957 YP_001431595.1 CDS Rcas_1483 NC_009767.1 1896032 1896859 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_3478 alpha/beta hydrolase fold; alpha/beta hydrolase complement(1896032..1896859) Roseiflexus castenholzii DSM 13941 5538958 YP_001431596.1 CDS Rcas_1484 NC_009767.1 1897056 1897868 D PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_3477 CobB/CobQ domain protein glutamine amidotransferase; glutamine amidotransferase 1897056..1897868 Roseiflexus castenholzii DSM 13941 5538959 YP_001431597.1 CDS Rcas_1485 NC_009767.1 1897926 1899029 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3476 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(1897926..1899029) Roseiflexus castenholzii DSM 13941 5538960 YP_001431598.1 CDS Rcas_1486 NC_009767.1 1899225 1900889 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3475 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1899225..1900889 Roseiflexus castenholzii DSM 13941 5538961 YP_001431599.1 CDS Rcas_1487 NC_009767.1 1901497 1901898 D KEGG: rrs:RoseRS_3474 hypothetical protein; hypothetical protein 1901497..1901898 Roseiflexus castenholzii DSM 13941 5538962 YP_001431600.1 CDS Rcas_1488 NC_009767.1 1902527 1903810 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3472 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1902527..1903810) Roseiflexus castenholzii DSM 13941 5538963 YP_001431601.1 CDS Rcas_1489 NC_009767.1 1904023 1905210 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3471 glycosyl transferase, group 1; group 1 glycosyl transferase complement(1904023..1905210) Roseiflexus castenholzii DSM 13941 5538964 YP_001431602.1 CDS Rcas_1490 NC_009767.1 1905207 1905449 R PFAM: protein of unknown function DUF970; KEGG: rrs:RoseRS_3470 protein of unknown function DUF970; hypothetical protein complement(1905207..1905449) Roseiflexus castenholzii DSM 13941 5538965 YP_001431603.1 CDS Rcas_1491 NC_009767.1 1905704 1906678 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rrs:RoseRS_3469 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1905704..1906678 Roseiflexus castenholzii DSM 13941 5538966 YP_001431604.1 CDS Rcas_1492 NC_009767.1 1907036 1908307 D PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_3468 beta-ketoacyl synthase; beta-ketoacyl synthase 1907036..1908307 Roseiflexus castenholzii DSM 13941 5538967 YP_001431605.1 CDS Rcas_1493 NC_009767.1 1909001 1909933 R KEGG: rrs:RoseRS_3467 hypothetical protein; hypothetical protein complement(1909001..1909933) Roseiflexus castenholzii DSM 13941 5538968 YP_001431606.1 CDS Rcas_1494 NC_009767.1 1910060 1911334 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(1910060..1911334) Roseiflexus castenholzii DSM 13941 5538969 YP_001431607.1 CDS Rcas_1495 NC_009767.1 1911347 1911838 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3465 NUDIX hydrolase; NUDIX hydrolase complement(1911347..1911838) Roseiflexus castenholzii DSM 13941 5538970 YP_001431608.1 CDS Rcas_1496 NC_009767.1 1911869 1912393 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3464 NUDIX hydrolase; NUDIX hydrolase complement(1911869..1912393) Roseiflexus castenholzii DSM 13941 5538971 YP_001431609.1 CDS Rcas_1497 NC_009767.1 1912838 1914466 R KEGG: rrs:RoseRS_3730 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(1912838..1914466) Roseiflexus castenholzii DSM 13941 5538972 YP_001431610.1 CDS Rcas_1498 NC_009767.1 1914617 1915123 D KEGG: rrs:RoseRS_3731 hypothetical protein; hypothetical protein 1914617..1915123 Roseiflexus castenholzii DSM 13941 5538973 YP_001431611.1 CDS Rcas_1499 NC_009767.1 1915133 1915999 D PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_3732 amidohydrolase 2; amidohydrolase 1915133..1915999 Roseiflexus castenholzii DSM 13941 5538974 YP_001431612.1 CDS Rcas_1500 NC_009767.1 1916024 1916986 D KEGG: rrs:RoseRS_3733 hypothetical protein; hypothetical protein 1916024..1916986 Roseiflexus castenholzii DSM 13941 5538975 YP_001431613.1 CDS Rcas_1501 NC_009767.1 1916983 1918545 D PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: rrs:RoseRS_3734 glycoside hydrolase, family 57; hypothetical protein 1916983..1918545 Roseiflexus castenholzii DSM 13941 5538976 YP_001431614.1 CDS Rcas_1502 NC_009767.1 1918778 1919119 R PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_3735 rhodanese domain protein; rhodanese domain-containing protein complement(1918778..1919119) Roseiflexus castenholzii DSM 13941 5538977 YP_001431615.1 CDS Rcas_1503 NC_009767.1 1919151 1920602 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3736 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1919151..1920602) Roseiflexus castenholzii DSM 13941 5538978 YP_001431616.1 CDS Rcas_1504 NC_009767.1 1920599 1921294 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3737 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(1920599..1921294) Roseiflexus castenholzii DSM 13941 5538979 YP_001431617.1 CDS Rcas_1505 NC_009767.1 1921433 1921984 R KEGG: rrs:RoseRS_3738 hypothetical protein; hypothetical protein complement(1921433..1921984) Roseiflexus castenholzii DSM 13941 5538980 YP_001431618.1 CDS Rcas_1506 NC_009767.1 1922446 1924830 D KEGG: rrs:RoseRS_3739 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 1922446..1924830 Roseiflexus castenholzii DSM 13941 5538982 YP_001431619.1 CDS Rcas_1508 NC_009767.1 1925343 1926038 R PFAM: peptidase membrane zinc metallopeptidase KEGG: rrs:RoseRS_3740 peptidase, membrane zinc metallopeptidase; zinc metallopeptidase complement(1925343..1926038) Roseiflexus castenholzii DSM 13941 5538984 YP_001431620.1 CDS Rcas_1509 NC_009767.1 1926082 1927587 R PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3741 ABC-2 type transporter; ABC-2 type transporter complement(1926082..1927587) Roseiflexus castenholzii DSM 13941 5538985 YP_001431621.1 CDS Rcas_1510 NC_009767.1 1927589 1928671 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3742 ABC transporter related; ABC transporter-like protein complement(1927589..1928671) Roseiflexus castenholzii DSM 13941 5538986 YP_001431622.1 CDS Rcas_1511 NC_009767.1 1929082 1930482 D TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: rrs:RoseRS_3743 amidophosphoribosyltransferase; amidophosphoribosyltransferase 1929082..1930482 Roseiflexus castenholzii DSM 13941 5538987 YP_001431623.1 CDS Rcas_1512 NC_009767.1 1931195 1934113 D KEGG: rrs:RoseRS_3415 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 1931195..1934113 Roseiflexus castenholzii DSM 13941 5538988 YP_001431624.1 CDS Rcas_1513 NC_009767.1 1934377 1935369 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3414 ribonuclease III; ribonuclease III 1934377..1935369 Roseiflexus castenholzii DSM 13941 5538989 YP_001431625.1 CDS Rcas_1514 NC_009767.1 1935384 1936169 R PFAM: biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_3413 biotin/lipoate A/B protein ligase; biotin/lipoate A/B protein ligase complement(1935384..1936169) Roseiflexus castenholzii DSM 13941 5538990 YP_001431626.1 CDS Rcas_1515 NC_009767.1 1936166 1936450 R KEGG: rrs:RoseRS_3412 hypothetical protein; hypothetical protein complement(1936166..1936450) Roseiflexus castenholzii DSM 13941 5538991 YP_001431627.1 CDS Rcas_1516 NC_009767.1 1936683 1937060 R KEGG: ana:alr0758 hypothetical protein; transcriptional modulator of MazE/toxin MazF complement(1936683..1937060) Roseiflexus castenholzii DSM 13941 5538992 YP_001431628.1 CDS Rcas_1517 NC_009767.1 1937035 1937259 R hypothetical protein complement(1937035..1937259) Roseiflexus castenholzii DSM 13941 5538993 YP_001431629.1 CDS Rcas_1518 NC_009767.1 1937633 1938196 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1937633..1938196 Roseiflexus castenholzii DSM 13941 5538994 YP_001431630.1 CDS Rcas_1519 NC_009767.1 1938217 1939887 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: rrs:RoseRS_3410 carbohydrate kinase, YjeF related protein; carbohydrate kinase 1938217..1939887 Roseiflexus castenholzii DSM 13941 5538995 YP_001431631.1 CDS Rcas_1520 NC_009767.1 1939902 1940687 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3408 protein of unknown function DUF820; hypothetical protein 1939902..1940687 Roseiflexus castenholzii DSM 13941 5538996 YP_001431632.1 CDS Rcas_1521 NC_009767.1 1940690 1941115 D TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_3407 regulatory protein, FmdB family; FmdB family regulatory protein 1940690..1941115 Roseiflexus castenholzii DSM 13941 5538997 YP_001431633.1 CDS Rcas_1522 NC_009767.1 1941956 1942552 D KEGG: rrs:RoseRS_3406 hypothetical protein; hypothetical protein 1941956..1942552 Roseiflexus castenholzii DSM 13941 5538998 YP_001431634.1 CDS Rcas_1523 NC_009767.1 1942620 1942958 D PFAM: Sterol-binding domain protein; KEGG: rrs:RoseRS_3405 hypothetical protein; sterol-binding domain-containing protein 1942620..1942958 Roseiflexus castenholzii DSM 13941 5538999 YP_001431635.1 CDS Rcas_1524 NC_009767.1 1942969 1943607 R PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_3404 signal transduction protein with CBS domains; signal transduction protein complement(1942969..1943607) Roseiflexus castenholzii DSM 13941 5539000 YP_001431636.1 CDS Rcas_1525 NC_009767.1 1943692 1944426 R PFAM: LmbE family protein; KEGG: rrs:RoseRS_3403 LmbE family protein; LmbE family protein complement(1943692..1944426) Roseiflexus castenholzii DSM 13941 5539001 YP_001431637.1 CDS Rcas_1526 NC_009767.1 1945009 1945485 D PFAM: ribosomal protein S6; KEGG: rrs:RoseRS_3402 ribosomal protein S6; 30S ribosomal protein S6 1945009..1945485 Roseiflexus castenholzii DSM 13941 5539002 YP_001431638.1 CDS Rcas_1527 NC_009767.1 1945524 1945982 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rrs:RoseRS_3401 single-strand binding protein; single-strand binding protein 1945524..1945982 Roseiflexus castenholzii DSM 13941 5539003 YP_001431639.1 CDS rpsR NC_009767.1 1946003 1946275 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1946003..1946275 Roseiflexus castenholzii DSM 13941 5539004 YP_001431640.1 CDS Rcas_1529 NC_009767.1 1946353 1947906 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rrs:RoseRS_3399 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1946353..1947906 Roseiflexus castenholzii DSM 13941 5539005 YP_001431641.1 CDS Rcas_1530 NC_009767.1 1949184 1950149 D KEGG: rrs:RoseRS_3398 hypothetical protein; hypothetical protein 1949184..1950149 Roseiflexus castenholzii DSM 13941 5539006 YP_001431642.1 CDS Rcas_1531 NC_009767.1 1950355 1951554 R TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_3397 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(1950355..1951554) Roseiflexus castenholzii DSM 13941 5539007 YP_001431643.1 CDS sucA NC_009767.1 1951569 1954430 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 complement(1951569..1954430) Roseiflexus castenholzii DSM 13941 5539008 YP_001431644.1 CDS Rcas_1533 NC_009767.1 1954822 1955847 D PFAM: fatty acid desaturase; KEGG: rrs:RoseRS_3373 fatty acid desaturase; fatty acid desaturase 1954822..1955847 Roseiflexus castenholzii DSM 13941 5539009 YP_001431645.1 CDS Rcas_1534 NC_009767.1 1956805 1958178 D PFAM: PUCC protein; KEGG: rrs:RoseRS_1912 PucC protein; PUCC protein 1956805..1958178 Roseiflexus castenholzii DSM 13941 5539010 YP_001431646.1 CDS Rcas_1535 NC_009767.1 1958194 1958991 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1911 methyltransferase type 11; type 11 methyltransferase 1958194..1958991 Roseiflexus castenholzii DSM 13941 5539011 YP_001431647.1 CDS Rcas_1536 NC_009767.1 1959149 1960393 D light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit N 1959149..1960393 Roseiflexus castenholzii DSM 13941 5539012 YP_001431648.1 CDS Rcas_1537 NC_009767.1 1961008 1962699 D light-independent reduction of protochlorophyllide to form chlorophyllide a; light-independent protochlorophyllide reductase subunit B 1961008..1962699 Roseiflexus castenholzii DSM 13941 5539013 YP_001431649.1 CDS chlL NC_009767.1 1962720 1963541 D light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production; protochlorophyllide reductase iron-sulfur ATP-binding protein 1962720..1963541 Roseiflexus castenholzii DSM 13941 5539014 YP_001431650.1 CDS Rcas_1539 NC_009767.1 1963532 1964245 D catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine; Mg-protoporphyrin IX methyl transferase 1963532..1964245 Roseiflexus castenholzii DSM 13941 5539015 YP_001431651.1 CDS Rcas_1540 NC_009767.1 1964474 1964803 D KEGG: rrs:RoseRS_1906 hypothetical protein; hypothetical protein 1964474..1964803 Roseiflexus castenholzii DSM 13941 5539016 YP_001431652.1 CDS Rcas_1541 NC_009767.1 1964853 1965968 D oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis; magnesium-protoporphyrin IX monomethyl ester cyclase 1964853..1965968 Roseiflexus castenholzii DSM 13941 5539017 YP_001431653.1 CDS Rcas_1542 NC_009767.1 1966051 1969902 D catalyzes the formation of Mg-protoporphyrin IX from protoporphyrin IX and Mg(2+); first committed step of chlorophyll biosynthesis; magnesium chelatase subunit H 1966051..1969902 Roseiflexus castenholzii DSM 13941 5539018 YP_001431654.1 CDS Rcas_1543 NC_009767.1 1969932 1971233 D PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1903 PucC protein; PUCC protein 1969932..1971233 Roseiflexus castenholzii DSM 13941 5539019 YP_001431655.1 CDS Rcas_1544 NC_009767.1 1971248 1972381 D KEGG: rrs:RoseRS_1902 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; magnesium chelatase ATPase subunit I 1971248..1972381 Roseiflexus castenholzii DSM 13941 5539020 YP_001431656.1 CDS Rcas_1545 NC_009767.1 1972431 1975265 R KEGG: rrs:RoseRS_1899 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DEXDc2; helicase c2; DNA polymerase III subunit epsilon complement(1972431..1975265) Roseiflexus castenholzii DSM 13941 5539021 YP_001431657.1 CDS Rcas_1546 NC_009767.1 1985596 1986717 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1985596..1986717) Roseiflexus castenholzii DSM 13941 5539022 YP_001431658.1 CDS Rcas_1547 NC_009767.1 1987146 1987622 R PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1959 uncharacterized protein UPF0114; hypothetical protein complement(1987146..1987622) Roseiflexus castenholzii DSM 13941 5539023 YP_001431659.1 CDS leuD NC_009767.1 1987629 1988243 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(1987629..1988243) Roseiflexus castenholzii DSM 13941 5539024 YP_001431660.1 CDS Rcas_1549 NC_009767.1 1988333 1989751 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1988333..1989751) Roseiflexus castenholzii DSM 13941 5539025 YP_001431661.1 CDS Rcas_1550 NC_009767.1 1989930 1990859 R TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: rrs:RoseRS_1962 branched-chain amino acid aminotransferase; branched-chain amino acid aminotransferase complement(1989930..1990859) Roseiflexus castenholzii DSM 13941 5539026 YP_001431662.1 CDS Rcas_1551 NC_009767.1 1990917 1992527 R TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rrs:RoseRS_1963 2-isopropylmalate synthase/homocitrate synthase family protein; alpha-isopropylmalate/homocitrate synthase family transferase complement(1990917..1992527) Roseiflexus castenholzii DSM 13941 5539027 YP_001431663.1 CDS Rcas_1552 NC_009767.1 1992552 1993391 R PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1964 prephenate dehydratase; prephenate dehydratase complement(1992552..1993391) Roseiflexus castenholzii DSM 13941 5539028 YP_001431664.1 CDS Rcas_1553 NC_009767.1 1993618 1995288 R TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rrs:RoseRS_1965 2-isopropylmalate synthase; 2-isopropylmalate synthase complement(1993618..1995288) Roseiflexus castenholzii DSM 13941 5539029 YP_001431665.1 CDS Rcas_1554 NC_009767.1 1995519 1995929 R PFAM: S23 ribosomal protein; KEGG: cbo:CBO0737 hypothetical protein; 30S ribosomal protein S23 complement(1995519..1995929) Roseiflexus castenholzii DSM 13941 5539030 YP_001431666.1 CDS Rcas_1555 NC_009767.1 1996237 1997259 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(1996237..1997259) Roseiflexus castenholzii DSM 13941 5539031 YP_001431667.1 CDS Rcas_1556 NC_009767.1 1997675 1998217 R TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: rrs:RoseRS_1967 acetolactate synthase, small subunit; acetolactate synthase small subunit complement(1997675..1998217) Roseiflexus castenholzii DSM 13941 5539032 YP_001431668.1 CDS Rcas_1557 NC_009767.1 1998236 1999981 R TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rrs:RoseRS_1968 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit complement(1998236..1999981) Roseiflexus castenholzii DSM 13941 5539033 YP_001431669.1 CDS Rcas_1558 NC_009767.1 2000459 2001427 R PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1970 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta complement(2000459..2001427) Roseiflexus castenholzii DSM 13941 5539034 YP_001431670.1 CDS Rcas_1559 NC_009767.1 2001446 2002507 R PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1971 homoserine dehydrogenase; homoserine dehydrogenase complement(2001446..2002507) Roseiflexus castenholzii DSM 13941 5539035 YP_001431671.1 CDS Rcas_1560 NC_009767.1 2002847 2003185 D KEGG: rrs:RoseRS_1972 hypothetical protein; hypothetical protein 2002847..2003185 Roseiflexus castenholzii DSM 13941 5539036 YP_001431672.1 CDS Rcas_1561 NC_009767.1 2004133 2005035 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0918 protein of unknown function DUF820; hypothetical protein 2004133..2005035 Roseiflexus castenholzii DSM 13941 5539037 YP_001431673.1 CDS Rcas_1562 NC_009767.1 2005093 2006271 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(2005093..2006271) Roseiflexus castenholzii DSM 13941 5539038 YP_001431674.1 CDS Rcas_1563 NC_009767.1 2006276 2009836 R TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0920 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase complement(2006276..2009836) Roseiflexus castenholzii DSM 13941 5539039 YP_001431675.1 CDS Rcas_1564 NC_009767.1 2009980 2010456 R KEGG: rrs:RoseRS_0921 hypothetical protein; hypothetical protein complement(2009980..2010456) Roseiflexus castenholzii DSM 13941 5539040 YP_001431676.1 CDS Rcas_1565 NC_009767.1 2010466 2010735 R KEGG: rrs:RoseRS_0922 hypothetical protein; hypothetical protein complement(2010466..2010735) Roseiflexus castenholzii DSM 13941 5539041 YP_001431677.1 CDS Rcas_1566 NC_009767.1 2011196 2011756 R KEGG: rrs:RoseRS_0923 hypothetical protein; hypothetical protein complement(2011196..2011756) Roseiflexus castenholzii DSM 13941 5539042 YP_001431678.1 CDS Rcas_1567 NC_009767.1 2011958 2013151 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rrs:RoseRS_0924 transcriptional regulator, GntR family; GntR family transcriptional regulator 2011958..2013151 Roseiflexus castenholzii DSM 13941 5539043 YP_001431679.1 CDS Rcas_1568 NC_009767.1 2013176 2014882 D PFAM: thymidylate synthase complementing protein ThyX; KEGG: rrs:RoseRS_0926 thymidylate synthase complementing protein ThyX; thymidylate synthase complementing protein ThyX 2013176..2014882 Roseiflexus castenholzii DSM 13941 5539044 YP_001431680.1 CDS Rcas_1569 NC_009767.1 2016681 2019101 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_0927 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 2016681..2019101 Roseiflexus castenholzii DSM 13941 5539045 YP_001431681.1 CDS Rcas_1570 NC_009767.1 2019216 2020406 D KEGG: rrs:RoseRS_0928 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 2019216..2020406 Roseiflexus castenholzii DSM 13941 5539046 YP_001431682.1 CDS Rcas_1571 NC_009767.1 2020440 2020757 D PFAM: protein of unknown function DUF59; KEGG: rrs:RoseRS_0929 protein of unknown function DUF59; hypothetical protein 2020440..2020757 Roseiflexus castenholzii DSM 13941 5539047 YP_001431683.1 CDS Rcas_1572 NC_009767.1 2021006 2021758 D PFAM: electron transport protein SCO1/SenC; KEGG: rrs:RoseRS_0931 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 2021006..2021758 Roseiflexus castenholzii DSM 13941 5539048 YP_001431684.1 CDS Rcas_1573 NC_009767.1 2021935 2022105 D KEGG: rrs:RoseRS_0932 hypothetical protein; hypothetical protein 2021935..2022105 Roseiflexus castenholzii DSM 13941 5539049 YP_001431685.1 CDS Rcas_1574 NC_009767.1 2022102 2022608 D PFAM: blue (type 1) copper domain protein; cytochrome c oxidase subunit II; KEGG: rrs:RoseRS_0933 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 2022102..2022608 Roseiflexus castenholzii DSM 13941 5539050 YP_001431686.1 CDS Rcas_1575 NC_009767.1 2022658 2024343 D PFAM: cytochrome c oxidase subunit I; KEGG: rrs:RoseRS_0934 cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 2022658..2024343 Roseiflexus castenholzii DSM 13941 5539051 YP_001431687.1 CDS Rcas_1576 NC_009767.1 2024700 2026982 D PFAM: peptidase domain protein; KEGG: rrs:RoseRS_0935 peptidase domain protein; peptidase domain-containing protein 2024700..2026982 Roseiflexus castenholzii DSM 13941 5539052 YP_001431688.1 CDS Rcas_1577 NC_009767.1 2027037 2027396 D PFAM: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0936 helix-turn-helix domain protein; XRE family transcriptional regulator 2027037..2027396 Roseiflexus castenholzii DSM 13941 5539053 YP_001431689.1 CDS Rcas_1578 NC_009767.1 2027368 2029155 D PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_0937 extracellular solute-binding protein, family 5; extracellular solute-binding protein 2027368..2029155 Roseiflexus castenholzii DSM 13941 5539054 YP_001431690.1 CDS Rcas_1579 NC_009767.1 2029200 2029928 R PFAM: regulatory protein LuxR; response regulator receiver; KEGG: rrs:RoseRS_0938 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(2029200..2029928) Roseiflexus castenholzii DSM 13941 5539055 YP_001431691.1 CDS Rcas_1580 NC_009767.1 2029934 2030983 R PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_0939 histidine kinase; histidine kinase complement(2029934..2030983) Roseiflexus castenholzii DSM 13941 5539056 YP_001431692.1 CDS Rcas_1581 NC_009767.1 2031153 2031407 R KEGG: mxa:MXAN_4618 hypothetical protein; hypothetical protein complement(2031153..2031407) Roseiflexus castenholzii DSM 13941 5539057 YP_001431693.1 CDS Rcas_1582 NC_009767.1 2032021 2032626 D TIGRFAM: bacteriochlorophyll 4-vinyl reductase; PFAM: 4-vinyl reductase 4VR; KEGG: rrs:RoseRS_0940 bacteriochlorophyll 4-vinyl reductase; bacteriochlorophyll 4-vinyl reductase 2032021..2032626 Roseiflexus castenholzii DSM 13941 5539058 YP_001431694.1 CDS Rcas_1583 NC_009767.1 2032707 2033801 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_0941 radical SAM domain protein; radical SAM domain-containing protein 2032707..2033801 Roseiflexus castenholzii DSM 13941 5539059 YP_001431695.1 CDS Rcas_1584 NC_009767.1 2033814 2035397 D KEGG: rrs:RoseRS_0942 magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; TIGRFAM: magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase; PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase 2033814..2035397 Roseiflexus castenholzii DSM 13941 5539060 YP_001431696.1 CDS Rcas_1585 NC_009767.1 2035612 2037090 D TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_0943 phytoene dehydrogenase-related protein; zeta-phytoene desaturase 2035612..2037090 Roseiflexus castenholzii DSM 13941 5539061 YP_001431697.1 CDS Rcas_1586 NC_009767.1 2037472 2038305 D KEGG: rrs:RoseRS_0944 Zn-dependent hydrolase of the beta-lactamase fold-like protein; Zn-dependent hydrolase 2037472..2038305 Roseiflexus castenholzii DSM 13941 5539062 YP_001431698.1 CDS Rcas_1587 NC_009767.1 2039956 2040855 R PFAM: intradiol ring-cleavage dioxygenase; KEGG: rrs:RoseRS_0945 intradiol ring-cleavage dioxygenase; intradiol ring-cleavage dioxygenase complement(2039956..2040855) Roseiflexus castenholzii DSM 13941 5539063 YP_001431699.1 CDS Rcas_1588 NC_009767.1 2041273 2043000 D TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rrs:RoseRS_2067 L-lactate transport; L-lactate transport 2041273..2043000 Roseiflexus castenholzii DSM 13941 5539064 YP_001431700.1 CDS Rcas_1589 NC_009767.1 2043025 2043870 R PFAM: transport system permease; ABC-3 protein; KEGG: rrs:RoseRS_1256 ABC-3 protein; ABC-3 protein complement(2043025..2043870) Roseiflexus castenholzii DSM 13941 5539065 YP_001431701.1 CDS Rcas_1590 NC_009767.1 2043897 2044685 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1257 ABC transporter related; ABC transporter-like protein complement(2043897..2044685) Roseiflexus castenholzii DSM 13941 5539066 YP_001431702.1 CDS Rcas_1591 NC_009767.1 2044682 2046175 R PFAM: periplasmic solute binding protein; KEGG: rrs:RoseRS_1258 periplasmic solute binding protein; periplasmic solute binding protein complement(2044682..2046175) Roseiflexus castenholzii DSM 13941 5539067 YP_001431703.1 CDS Rcas_1592 NC_009767.1 2046416 2047831 D PFAM: SH3 type 3 domain protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1259 protein kinase; serine/threonine protein kinase 2046416..2047831 Roseiflexus castenholzii DSM 13941 5539068 YP_001431704.1 CDS Rcas_1593 NC_009767.1 2047943 2048689 D PFAM: Silent information regulator protein Sir2; KEGG: rrs:RoseRS_1260 silent information regulator protein Sir2; silent information regulator protein Sir2 2047943..2048689 Roseiflexus castenholzii DSM 13941 5539069 YP_001431705.1 CDS Rcas_1594 NC_009767.1 2048736 2049515 D PFAM: Silent information regulator protein Sir2; KEGG: rrs:RoseRS_1261 silent information regulator protein Sir2; silent information regulator protein Sir2 2048736..2049515 Roseiflexus castenholzii DSM 13941 5539070 YP_001431706.1 CDS Rcas_1595 NC_009767.1 2049537 2050157 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1262 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2049537..2050157 Roseiflexus castenholzii DSM 13941 5539071 YP_001431707.1 CDS Rcas_1596 NC_009767.1 2050150 2050800 D KEGG: rrs:RoseRS_1263 hypothetical protein; hypothetical protein 2050150..2050800 Roseiflexus castenholzii DSM 13941 5539072 YP_001431708.1 CDS Rcas_1597 NC_009767.1 2051203 2055711 R KEGG: rrs:RoseRS_1264 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' complement(2051203..2055711) Roseiflexus castenholzii DSM 13941 5539073 YP_001431709.1 CDS rpoB NC_009767.1 2055798 2059535 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(2055798..2059535) Roseiflexus castenholzii DSM 13941 5539074 YP_001431710.1 CDS Rcas_1599 NC_009767.1 2059827 2060813 R KEGG: ade:Adeh_1681 PE-PGRS family protein; hypothetical protein complement(2059827..2060813) Roseiflexus castenholzii DSM 13941 5539075 YP_001431711.1 CDS Rcas_1600 NC_009767.1 2060967 2061182 R hypothetical protein complement(2060967..2061182) Roseiflexus castenholzii DSM 13941 5539076 YP_001431712.1 CDS Rcas_1602 NC_009767.1 2063058 2066066 R KEGG: rrs:RoseRS_2919 protein of unknown function DUF323; signal transduction protein complement(2063058..2066066) Roseiflexus castenholzii DSM 13941 5539078 YP_001431713.1 CDS Rcas_1603 NC_009767.1 2066112 2066567 R KEGG: ter:Tery_1841 peptidase C14, caspase catalytic subunit P20; hypothetical protein complement(2066112..2066567) Roseiflexus castenholzii DSM 13941 5539079 YP_001431714.1 CDS Rcas_1604 NC_009767.1 2066571 2067188 R KEGG: ter:Tery_1841 peptidase C14, caspase catalytic subunit P20; peptidase C14, caspase catalytic subunit P20 complement(2066571..2067188) Roseiflexus castenholzii DSM 13941 5539080 YP_001431715.1 CDS Rcas_1605 NC_009767.1 2067227 2069791 R KEGG: rrs:RoseRS_0237 ATPase (AAA+ superfamily)-like protein; ATPase AAA complement(2067227..2069791) Roseiflexus castenholzii DSM 13941 5539081 YP_001431716.1 CDS Rcas_1606 NC_009767.1 2069909 2071069 R PFAM: AAA-4 family protein; KEGG: rrs:RoseRS_1735 transcriptional regulator; transcriptional regulator complement(2069909..2071069) Roseiflexus castenholzii DSM 13941 5539082 YP_001431717.1 CDS Rcas_1607 NC_009767.1 2071069 2073798 R KEGG: rrs:RoseRS_1734 SMC domain protein; SMC domain-containing protein complement(2071069..2073798) Roseiflexus castenholzii DSM 13941 5539083 YP_001431718.1 CDS Rcas_1608 NC_009767.1 2073863 2077702 R PFAM: protein of unknown function DUF559; protein of unknown function DUF1156; KEGG: rrs:RoseRS_0239 protein of unknown function DUF1156; hypothetical protein complement(2073863..2077702) Roseiflexus castenholzii DSM 13941 5539084 YP_001431719.1 CDS Rcas_1609 NC_009767.1 2077699 2081088 R PFAM: SNF2-related protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_0240 helicase domain protein; helicase complement(2077699..2081088) Roseiflexus castenholzii DSM 13941 5539085 YP_001431720.1 CDS Rcas_1610 NC_009767.1 2081493 2082197 R PFAM: Domain of unknown function DUF1814; KEGG: gsu:GSU1368 hypothetical protein; hypothetical protein complement(2081493..2082197) Roseiflexus castenholzii DSM 13941 5539086 YP_001431721.1 CDS Rcas_1611 NC_009767.1 2082194 2082835 R KEGG: cph:Cpha266_1225 hypothetical protein; hypothetical protein complement(2082194..2082835) Roseiflexus castenholzii DSM 13941 5539087 YP_001431722.1 CDS Rcas_1612 NC_009767.1 2082822 2083442 R KEGG: gvi:gll3649 hypothetical protein; hypothetical protein complement(2082822..2083442) Roseiflexus castenholzii DSM 13941 5539088 YP_001431723.1 CDS Rcas_1613 NC_009767.1 2083360 2084730 R hypothetical protein complement(2083360..2084730) Roseiflexus castenholzii DSM 13941 5539089 YP_001431724.1 CDS Rcas_1614 NC_009767.1 2084730 2085590 R KEGG: sth:STH816 methylthioribose-1-phosphate isomerase; hypothetical protein complement(2084730..2085590) Roseiflexus castenholzii DSM 13941 5539090 YP_001431725.1 CDS Rcas_1615 NC_009767.1 2085663 2086022 R KEGG: rrs:RoseRS_1328 hypothetical protein; hypothetical protein complement(2085663..2086022) Roseiflexus castenholzii DSM 13941 5539091 YP_001431726.1 CDS Rcas_1616 NC_009767.1 2086000 2086590 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_1329 NUDIX hydrolase; NUDIX hydrolase complement(2086000..2086590) Roseiflexus castenholzii DSM 13941 5539092 YP_001431727.1 CDS Rcas_1617 NC_009767.1 2086594 2088651 R PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_1330 shikimate/quinate 5-dehydrogenase; shikimate/quinate 5-dehydrogenase complement(2086594..2088651) Roseiflexus castenholzii DSM 13941 5539093 YP_001431728.1 CDS Rcas_1618 NC_009767.1 2089444 2091711 R KEGG: rrs:RoseRS_1331 hypothetical protein; hypothetical protein complement(2089444..2091711) Roseiflexus castenholzii DSM 13941 5539094 YP_001431729.1 CDS Rcas_1619 NC_009767.1 2091824 2093638 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 2091824..2093638 Roseiflexus castenholzii DSM 13941 5539095 YP_001431730.1 CDS Rcas_1620 NC_009767.1 2093683 2094696 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: rrs:RoseRS_1333 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2093683..2094696 Roseiflexus castenholzii DSM 13941 5539096 YP_001431731.1 CDS Rcas_1621 NC_009767.1 2094693 2096213 D TIGRFAM: MazG family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; MazG nucleotide pyrophosphohydrolase; KEGG: rrs:RoseRS_1334 MazG family protein; MazG family protein 2094693..2096213 Roseiflexus castenholzii DSM 13941 5539097 YP_001431732.1 CDS Rcas_1622 NC_009767.1 2096200 2096448 D PFAM: protein of unknown function DUF951; KEGG: rrs:RoseRS_1335 protein of unknown function DUF951; hypothetical protein 2096200..2096448 Roseiflexus castenholzii DSM 13941 5539098 YP_001431733.1 CDS Rcas_1623 NC_009767.1 2096543 2097937 D PFAM: protein of unknown function DUF107; KEGG: rrs:RoseRS_1336 protein of unknown function DUF107; hypothetical protein 2096543..2097937 Roseiflexus castenholzii DSM 13941 5539099 YP_001431734.1 CDS Rcas_1624 NC_009767.1 2097953 2098798 D PFAM: band 7 protein; KEGG: rrs:RoseRS_1337 band 7 protein; hypothetical protein 2097953..2098798 Roseiflexus castenholzii DSM 13941 5539100 YP_001431735.1 CDS Rcas_1625 NC_009767.1 2098786 2099568 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1338 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(2098786..2099568) Roseiflexus castenholzii DSM 13941 5539101 YP_001431736.1 CDS Rcas_1626 NC_009767.1 2099645 2100949 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1339 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2099645..2100949) Roseiflexus castenholzii DSM 13941 5539102 YP_001431737.1 CDS Rcas_1627 NC_009767.1 2100952 2102250 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1340 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2100952..2102250) Roseiflexus castenholzii DSM 13941 5539103 YP_001431738.1 CDS Rcas_1628 NC_009767.1 2102352 2103071 D KEGG: rrs:RoseRS_1341 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 2102352..2103071 Roseiflexus castenholzii DSM 13941 5539104 YP_001431739.1 CDS Rcas_1629 NC_009767.1 2103540 2104376 D PFAM: ExsB family protein; PP-loop domain protein; KEGG: rrs:RoseRS_1342 ExsB family protein; PP-loop domain-containing protein 2103540..2104376 Roseiflexus castenholzii DSM 13941 5539105 YP_001431740.1 CDS Rcas_1630 NC_009767.1 2104916 2105581 R KEGG: mem:Memar_0392 hypothetical protein; hypothetical protein complement(2104916..2105581) Roseiflexus castenholzii DSM 13941 5539106 YP_001431741.1 CDS Rcas_1631 NC_009767.1 2107875 2108945 D PFAM: basic membrane lipoprotein; KEGG: rrs:RoseRS_1320 basic membrane lipoprotein; basic membrane lipoprotein 2107875..2108945 Roseiflexus castenholzii DSM 13941 5539107 YP_001431742.1 CDS Rcas_1632 NC_009767.1 2109168 2110283 D PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1319 inner-membrane translocator; inner-membrane translocator 2109168..2110283 Roseiflexus castenholzii DSM 13941 5539108 YP_001431743.1 CDS Rcas_1633 NC_009767.1 2110295 2111335 D PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1318 inner-membrane translocator; inner-membrane translocator 2110295..2111335 Roseiflexus castenholzii DSM 13941 5539109 YP_001431744.1 CDS Rcas_1634 NC_009767.1 2111332 2112915 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1317 ABC transporter related; ABC transporter-like protein 2111332..2112915 Roseiflexus castenholzii DSM 13941 5539110 YP_001431745.1 CDS Rcas_1635 NC_009767.1 2112906 2114273 R KEGG: rrs:RoseRS_1316 nicotinic acid phosphoribosyltransferase-like protein; nicotinic acid phosphoribosyltransferase-like protein complement(2112906..2114273) Roseiflexus castenholzii DSM 13941 5539111 YP_001431746.1 CDS Rcas_1636 NC_009767.1 2114585 2114827 D PFAM: protein of unknown function DUF433; KEGG: rrs:RoseRS_2492 protein of unknown function DUF433; hypothetical protein 2114585..2114827 Roseiflexus castenholzii DSM 13941 5539112 YP_001431747.1 CDS Rcas_1637 NC_009767.1 2114811 2115179 D KEGG: ava:Ava_2494 hypothetical protein; hypothetical protein 2114811..2115179 Roseiflexus castenholzii DSM 13941 5539113 YP_001431748.1 CDS Rcas_1638 NC_009767.1 2115516 2115770 D KEGG: rrs:RoseRS_1315 hypothetical protein; hypothetical protein 2115516..2115770 Roseiflexus castenholzii DSM 13941 5539114 YP_001431749.1 CDS Rcas_1639 NC_009767.1 2115730 2116266 R KEGG: rrs:RoseRS_1314 hypothetical protein; hypothetical protein complement(2115730..2116266) Roseiflexus castenholzii DSM 13941 5539115 YP_001431750.1 CDS Rcas_1640 NC_009767.1 2116268 2117209 R KEGG: rrs:RoseRS_1313 hypothetical protein; hypothetical protein complement(2116268..2117209) Roseiflexus castenholzii DSM 13941 5539116 YP_001431751.1 CDS Rcas_1641 NC_009767.1 2117216 2119537 R PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein; ATPase AAA complement(2117216..2119537) Roseiflexus castenholzii DSM 13941 5539117 YP_001431752.1 CDS Rcas_1642 NC_009767.1 2119980 2120315 D KEGG: rrs:RoseRS_1311 hypothetical protein; hypothetical protein 2119980..2120315 Roseiflexus castenholzii DSM 13941 5539118 YP_001431753.1 CDS Rcas_1643 NC_009767.1 2120335 2121132 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_1310 HAD-superfamily hydrolase, subfamily IIA; HAD family hydrolase complement(2120335..2121132) Roseiflexus castenholzii DSM 13941 5539119 YP_001431754.1 CDS argS NC_009767.1 2121142 2123064 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(2121142..2123064) Roseiflexus castenholzii DSM 13941 5539120 YP_001431755.1 CDS Rcas_1645 NC_009767.1 2123493 2126213 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Cache domain protein; KEGG: rrs:RoseRS_1308 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 2123493..2126213 Roseiflexus castenholzii DSM 13941 5539121 YP_001431756.1 CDS Rcas_1646 NC_009767.1 2126210 2127385 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1307 response regulator receiver sensor signal transduction histidine kinase; response regulator receiver sensor signal transduction histidine kinase 2126210..2127385 Roseiflexus castenholzii DSM 13941 5539122 YP_001431757.1 CDS Rcas_1647 NC_009767.1 2127360 2128802 R PFAM: cell cycle protein; KEGG: rrs:RoseRS_1306 cell cycle protein; cell cycle protein complement(2127360..2128802) Roseiflexus castenholzii DSM 13941 5539123 YP_001431758.1 CDS Rcas_1648 NC_009767.1 2128778 2129860 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(2128778..2129860) Roseiflexus castenholzii DSM 13941 5539124 YP_001431759.1 CDS Rcas_1649 NC_009767.1 2130122 2130571 R PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_1293 ferric uptake regulator, Fur family; ferric uptake regulator family protein complement(2130122..2130571) Roseiflexus castenholzii DSM 13941 5539125 YP_001431760.1 CDS Rcas_1650 NC_009767.1 2130710 2131360 D KEGG: rrs:RoseRS_1294 hypothetical protein; hypothetical protein 2130710..2131360 Roseiflexus castenholzii DSM 13941 5539126 YP_001431761.1 CDS Rcas_1651 NC_009767.1 2131461 2132153 D PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_1295 NUDIX hydrolase; NUDIX hydrolase 2131461..2132153 Roseiflexus castenholzii DSM 13941 5539127 YP_001431762.1 CDS Rcas_1652 NC_009767.1 2132171 2132416 D KEGG: rrs:RoseRS_1296 hypothetical protein; hypothetical protein 2132171..2132416 Roseiflexus castenholzii DSM 13941 5539128 YP_001431763.1 CDS Rcas_1653 NC_009767.1 2132463 2134946 D PFAM: peptidase S45 penicillin amidase; KEGG: rrs:RoseRS_1297 peptidase S45, penicillin amidase; peptidase S45 penicillin amidase 2132463..2134946 Roseiflexus castenholzii DSM 13941 5539129 YP_001431764.1 CDS Rcas_1654 NC_009767.1 2134943 2135440 D PFAM: protein of unknown function DUF427; KEGG: rrs:RoseRS_1298 protein of unknown function DUF427; hypothetical protein 2134943..2135440 Roseiflexus castenholzii DSM 13941 5539130 YP_001431765.1 CDS Rcas_1655 NC_009767.1 2135409 2136275 R TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase family 2; KEGG: rrs:RoseRS_1299 inosine guanosine and xanthosine phosphorylase family; inosine guanosine and xanthosine phosphorylase family protein complement(2135409..2136275) Roseiflexus castenholzii DSM 13941 5539131 YP_001431766.1 CDS Rcas_1656 NC_009767.1 2136317 2137006 R PFAM: membrane-flanked domain; KEGG: rrs:RoseRS_1300 membrane-flanked domain; hypothetical protein complement(2136317..2137006) Roseiflexus castenholzii DSM 13941 5539132 YP_001431767.1 CDS Rcas_1657 NC_009767.1 2136993 2137793 R TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: rrs:RoseRS_1301 DNA repair protein RecO; DNA repair protein RecO complement(2136993..2137793) Roseiflexus castenholzii DSM 13941 5539133 YP_001431768.1 CDS tgt NC_009767.1 2137895 2139112 R Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase complement(2137895..2139112) Roseiflexus castenholzii DSM 13941 5539134 YP_001431769.1 CDS Rcas_1659 NC_009767.1 2139204 2140718 R KEGG: rrs:RoseRS_1303 hypothetical protein; hypothetical protein complement(2139204..2140718) Roseiflexus castenholzii DSM 13941 5539135 YP_001431770.1 CDS Rcas_1660 NC_009767.1 2140753 2141355 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1304 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(2140753..2141355) Roseiflexus castenholzii DSM 13941 5539136 YP_001431771.1 CDS Rcas_1661 NC_009767.1 2142358 2143113 R PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_1292 DsbA oxidoreductase; DSBA oxidoreductase complement(2142358..2143113) Roseiflexus castenholzii DSM 13941 5539137 YP_001431772.1 CDS Rcas_1662 NC_009767.1 2143157 2144194 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1291 glycosyl transferase, family 2; glycosyl transferase family protein 2143157..2144194 Roseiflexus castenholzii DSM 13941 5539138 YP_001431773.1 CDS Rcas_1663 NC_009767.1 2144150 2144827 R PFAM: phosphatidylserine decarboxylase-related; KEGG: rrs:RoseRS_1290 phosphatidylserine decarboxylase-like protein; phosphatidylserine decarboxylase complement(2144150..2144827) Roseiflexus castenholzii DSM 13941 5539139 YP_001431774.1 CDS Rcas_1664 NC_009767.1 2144872 2145408 R TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: rrs:RoseRS_1289 16S rRNA processing protein RimM; 16S rRNA-processing protein RimM complement(2144872..2145408) Roseiflexus castenholzii DSM 13941 5539140 YP_001431775.1 CDS Rcas_1665 NC_009767.1 2145413 2145640 R KEGG: rrs:RoseRS_1288 RNA-binding protein (contains KH domain)-like protein; RNA-binding protein complement(2145413..2145640) Roseiflexus castenholzii DSM 13941 5539141 YP_001431776.1 CDS Rcas_1666 NC_009767.1 2145647 2145928 R PFAM: ribosomal protein S16; KEGG: rrs:RoseRS_1287 ribosomal protein S16; 30S ribosomal protein S16 complement(2145647..2145928) Roseiflexus castenholzii DSM 13941 5539142 YP_001431777.1 CDS Rcas_1667 NC_009767.1 2145958 2147292 R KEGG: rrs:RoseRS_1286 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein complement(2145958..2147292) Roseiflexus castenholzii DSM 13941 5539143 YP_001431778.1 CDS Rcas_1668 NC_009767.1 2147527 2148978 R PFAM: protein of unknown function DUF95 transmembrane; ABC-2 type transporter; KEGG: rrs:RoseRS_1285 protein of unknown function DUF95, transmembrane; hypothetical protein complement(2147527..2148978) Roseiflexus castenholzii DSM 13941 5539144 YP_001431779.1 CDS Rcas_1669 NC_009767.1 2149112 2150128 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1284 ABC transporter related; ABC transporter-like protein complement(2149112..2150128) Roseiflexus castenholzii DSM 13941 5539145 YP_001431780.1 CDS Rcas_1670 NC_009767.1 2150390 2151466 D functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2150390..2151466 Roseiflexus castenholzii DSM 13941 5539146 YP_001431781.1 CDS Rcas_1671 NC_009767.1 2151479 2152369 D in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 2151479..2152369 Roseiflexus castenholzii DSM 13941 5539147 YP_001431782.1 CDS Rcas_1672 NC_009767.1 2152333 2152872 D KEGG: rrs:RoseRS_1281 hypothetical protein; hypothetical protein 2152333..2152872 Roseiflexus castenholzii DSM 13941 5539148 YP_001431783.1 CDS Rcas_1673 NC_009767.1 2152862 2155561 D PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rrs:RoseRS_1280 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 2152862..2155561 Roseiflexus castenholzii DSM 13941 5539149 YP_001431784.1 CDS Rcas_1674 NC_009767.1 2155578 2155886 D KEGG: rrs:RoseRS_1279 hypothetical protein; hypothetical protein 2155578..2155886 Roseiflexus castenholzii DSM 13941 5539150 YP_001431785.1 CDS Rcas_1675 NC_009767.1 2156175 2156561 R PFAM: PilT protein domain protein; KEGG: plasmid stability protein; twitching motility protein PilT complement(2156175..2156561) Roseiflexus castenholzii DSM 13941 5539151 YP_001431786.1 CDS Rcas_1676 NC_009767.1 2156558 2156794 R hypothetical protein complement(2156558..2156794) Roseiflexus castenholzii DSM 13941 5539152 YP_001431787.1 CDS Rcas_1677 NC_009767.1 2157004 2158362 D KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein 2157004..2158362 Roseiflexus castenholzii DSM 13941 5539153 YP_001431788.1 CDS Rcas_1678 NC_009767.1 2158350 2160434 R KEGG: rrs:RoseRS_1278 hypothetical protein; hypothetical protein complement(2158350..2160434) Roseiflexus castenholzii DSM 13941 5539154 YP_001431789.1 CDS Rcas_1679 NC_009767.1 2160735 2161118 R PFAM: protein of unknown function DUF192; KEGG: rrs:RoseRS_1277 protein of unknown function DUF192; hypothetical protein complement(2160735..2161118) Roseiflexus castenholzii DSM 13941 5539155 YP_001431790.1 CDS Rcas_1680 NC_009767.1 2161115 2162050 R PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1276 type II secretion system protein; type II secretion system protein complement(2161115..2162050) Roseiflexus castenholzii DSM 13941 5539156 YP_001431791.1 CDS Rcas_1681 NC_009767.1 2162064 2163047 R PFAM: type II secretion system protein; KEGG: rrs:RoseRS_1275 type II secretion system protein; type II secretion system protein complement(2162064..2163047) Roseiflexus castenholzii DSM 13941 5539157 YP_001431792.1 CDS Rcas_1682 NC_009767.1 2163192 2164589 R PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_1274 type II secretion system protein E; type II secretion system protein E complement(2163192..2164589) Roseiflexus castenholzii DSM 13941 5539158 YP_001431793.1 CDS Rcas_1683 NC_009767.1 2164616 2165908 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_1273 response regulator receiver protein; response regulator receiver protein complement(2164616..2165908) Roseiflexus castenholzii DSM 13941 5539159 YP_001431794.1 CDS Rcas_1684 NC_009767.1 2166163 2167173 R PFAM: SAF domain protein; KEGG: rrs:RoseRS_1272 SAF domain; SAF domain-containing protein complement(2166163..2167173) Roseiflexus castenholzii DSM 13941 5539160 YP_001431795.1 CDS Rcas_1685 NC_009767.1 2167330 2169882 R PFAM: Kelch repeat-containing protein; KEGG: rrs:RoseRS_1271 kelch repeat-containing protein; kelch repeat-containing protein complement(2167330..2169882) Roseiflexus castenholzii DSM 13941 5539161 YP_001431796.1 CDS Rcas_1686 NC_009767.1 2170008 2172488 R SMART: von Willebrand factor type A; KEGG: rrs:RoseRS_1269 von Willebrand factor, type A; von Willebrand factor type A complement(2170008..2172488) Roseiflexus castenholzii DSM 13941 5539162 YP_001431797.1 CDS Rcas_1687 NC_009767.1 2172628 2174382 R PFAM: PA14 domain protein; TadE family protein; SMART: PA14-related domain protein; KEGG: rrs:RoseRS_1268 PA14 domain protein; PA14 domain-containing protein complement(2172628..2174382) Roseiflexus castenholzii DSM 13941 5539163 YP_001431798.1 CDS Rcas_1688 NC_009767.1 2174414 2174941 R PFAM: TadE family protein; KEGG: rrs:RoseRS_1267 TadE family protein; TadE family protein complement(2174414..2174941) Roseiflexus castenholzii DSM 13941 5539164 YP_001431799.1 CDS Rcas_1689 NC_009767.1 2175078 2178272 R KEGG: rrs:RoseRS_1266 hypothetical protein; hypothetical protein complement(2175078..2178272) Roseiflexus castenholzii DSM 13941 5539165 YP_001431800.1 CDS Rcas_1690 NC_009767.1 2178719 2181229 D KEGG: rrs:RoseRS_1430 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein; DNA topoisomerase I 2178719..2181229 Roseiflexus castenholzii DSM 13941 5539166 YP_001431801.1 CDS Rcas_1691 NC_009767.1 2181774 2182442 D TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: rrs:RoseRS_1429 helix-hairpin-helix motif; helix-hairpin-helix repeat-containing competence protein ComEA 2181774..2182442 Roseiflexus castenholzii DSM 13941 5539167 YP_001431802.1 CDS Rcas_1692 NC_009767.1 2182439 2183878 D KEGG: rrs:RoseRS_1428 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2182439..2183878 Roseiflexus castenholzii DSM 13941 5539168 YP_001431803.1 CDS Rcas_1693 NC_009767.1 2184156 2184428 D hypothetical protein 2184156..2184428 Roseiflexus castenholzii DSM 13941 5539169 YP_001431804.1 CDS Rcas_1694 NC_009767.1 2184430 2185833 D KEGG: rrs:RoseRS_1426 hypothetical protein; hypothetical protein 2184430..2185833 Roseiflexus castenholzii DSM 13941 5539170 YP_001431805.1 CDS Rcas_1695 NC_009767.1 2187594 2188829 R SMART: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_1420 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(2187594..2188829) Roseiflexus castenholzii DSM 13941 5539173 YP_001431806.1 CDS Rcas_1696 NC_009767.1 2189309 2190679 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1419 peptidase dimerisation domain protein; peptidase dimerisation domain-containing protein 2189309..2190679 Roseiflexus castenholzii DSM 13941 5539174 YP_001431807.1 CDS Rcas_1697 NC_009767.1 2190868 2192532 R PFAM: Peptidase M9A collagenase domain protein; KEGG: rrs:RoseRS_1418 hypothetical protein; peptidase M9A collagenase domain-containing protein complement(2190868..2192532) Roseiflexus castenholzii DSM 13941 5539175 YP_001431808.1 CDS Rcas_1698 NC_009767.1 2192637 2192978 R KEGG: rrs:RoseRS_1417 hypothetical protein; hypothetical protein complement(2192637..2192978) Roseiflexus castenholzii DSM 13941 5539176 YP_001431809.1 CDS Rcas_1699 NC_009767.1 2193230 2194072 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_1416 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2193230..2194072 Roseiflexus castenholzii DSM 13941 5539177 YP_001431810.1 CDS Rcas_1700 NC_009767.1 2194244 2195182 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1415 glycosyl transferase, family 2; glycosyl transferase family protein 2194244..2195182 Roseiflexus castenholzii DSM 13941 5539178 YP_001431811.1 CDS Rcas_1701 NC_009767.1 2195195 2196025 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1414 glycosyl transferase, family 2; glycosyl transferase family protein 2195195..2196025 Roseiflexus castenholzii DSM 13941 5539179 YP_001431812.1 CDS Rcas_1702 NC_009767.1 2196038 2196592 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1412 protein of unknown function DUF820; hypothetical protein 2196038..2196592 Roseiflexus castenholzii DSM 13941 5539180 YP_001431813.1 CDS Rcas_1703 NC_009767.1 2196725 2197279 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1413 protein of unknown function DUF820; hypothetical protein 2196725..2197279 Roseiflexus castenholzii DSM 13941 5539181 YP_001431814.1 CDS Rcas_1704 NC_009767.1 2198625 2201285 R KEGG: rrs:RoseRS_1411 hypothetical protein; hypothetical protein complement(2198625..2201285) Roseiflexus castenholzii DSM 13941 5539182 YP_001431815.1 CDS Rcas_1705 NC_009767.1 2201423 2202280 D PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_1410 aldo/keto reductase; aldo/keto reductase 2201423..2202280 Roseiflexus castenholzii DSM 13941 5539183 YP_001431816.1 CDS Rcas_1706 NC_009767.1 2202529 2202924 D hypothetical protein 2202529..2202924 Roseiflexus castenholzii DSM 13941 5539184 YP_001431817.1 CDS Rcas_1707 NC_009767.1 2202946 2203395 D PFAM: peptidase A24A prepilin type IV; KEGG: pca:Pcar_2139 type 4 prepilin-like proteins leader peptide processing enzyme; peptidase A24A prepilin type IV 2202946..2203395 Roseiflexus castenholzii DSM 13941 5539185 YP_001431818.1 CDS Rcas_1708 NC_009767.1 2203539 2204360 D PFAM: transposase IS4 family protein; KEGG: rrs:RoseRS_1382 transposase, IS4 family protein; transposase IS4 family protein 2203539..2204360 Roseiflexus castenholzii DSM 13941 5539186 YP_001431819.1 CDS Rcas_1709 NC_009767.1 2204275 2206113 D PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: pth:PTH_1451 type IV secretory pathway, VirB11 components, and related ATPase; type II secretion system protein E 2204275..2206113 Roseiflexus castenholzii DSM 13941 5539187 YP_001431820.1 CDS Rcas_1710 NC_009767.1 2206110 2208206 D PFAM: von Willebrand factor type A; KEGG: csa:Csal_1466 von Willebrand factor, type A; von Willebrand factor type A 2206110..2208206 Roseiflexus castenholzii DSM 13941 5539188 YP_001431821.1 CDS Rcas_1711 NC_009767.1 2208319 2209275 D PFAM: type II secretion system protein; KEGG: drm:Dred_2117 type II secretion system protein; type II secretion system protein 2208319..2209275 Roseiflexus castenholzii DSM 13941 5539189 YP_001431822.1 CDS Rcas_1712 NC_009767.1 2210469 2211554 D KEGG: rrs:RoseRS_1407 hypothetical protein; hypothetical protein 2210469..2211554 Roseiflexus castenholzii DSM 13941 5539190 YP_001431823.1 CDS Rcas_1713 NC_009767.1 2211496 2212854 R KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein complement(2211496..2212854) Roseiflexus castenholzii DSM 13941 5539191 YP_001431824.1 CDS Rcas_1714 NC_009767.1 2213039 2213359 D hypothetical protein 2213039..2213359 Roseiflexus castenholzii DSM 13941 5539192 YP_001431825.1 CDS Rcas_1715 NC_009767.1 2213514 2213840 D hypothetical protein 2213514..2213840 Roseiflexus castenholzii DSM 13941 5539193 YP_001431826.1 CDS Rcas_1716 NC_009767.1 2213941 2214447 D KEGG: rrs:RoseRS_1407 hypothetical protein; hypothetical protein 2213941..2214447 Roseiflexus castenholzii DSM 13941 5539194 YP_001431827.1 CDS Rcas_1717 NC_009767.1 2214461 2214718 D hypothetical protein 2214461..2214718 Roseiflexus castenholzii DSM 13941 5539195 YP_001431828.1 CDS Rcas_1718 NC_009767.1 2214792 2215151 D KEGG: hne:HNE_2114 hypothetical protein; hypothetical protein 2214792..2215151 Roseiflexus castenholzii DSM 13941 5539196 YP_001431829.1 CDS Rcas_1719 NC_009767.1 2215273 2215650 D hypothetical protein 2215273..2215650 Roseiflexus castenholzii DSM 13941 5539197 YP_001431830.1 CDS Rcas_1720 NC_009767.1 2215693 2216115 D hypothetical protein 2215693..2216115 Roseiflexus castenholzii DSM 13941 5539198 YP_001431831.1 CDS Rcas_1721 NC_009767.1 2216131 2217243 R PFAM: regulatory protein MarR; ABC-3 protein; KEGG: rrs:RoseRS_3067 ABC-3 protein; MarR family transcriptional regulator complement(2216131..2217243) Roseiflexus castenholzii DSM 13941 5539199 YP_001431832.1 CDS Rcas_1722 NC_009767.1 2217301 2218182 R PFAM: ABC-3 protein; KEGG: rrs:RoseRS_3068 ABC-3 protein; ABC-3 protein complement(2217301..2218182) Roseiflexus castenholzii DSM 13941 5539200 YP_001431833.1 CDS Rcas_1723 NC_009767.1 2218448 2219239 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3069 ABC transporter related; ABC transporter-like protein complement(2218448..2219239) Roseiflexus castenholzii DSM 13941 5539201 YP_001431834.1 CDS Rcas_1724 NC_009767.1 2219309 2220238 R PFAM: periplasmic solute binding protein; KEGG: rrs:RoseRS_3070 periplasmic solute binding protein; periplasmic solute binding protein complement(2219309..2220238) Roseiflexus castenholzii DSM 13941 5539202 YP_001431835.1 CDS Rcas_1725 NC_009767.1 2221108 2221434 D KEGG: rrs:RoseRS_1005 hypothetical protein; hypothetical protein 2221108..2221434 Roseiflexus castenholzii DSM 13941 5539203 YP_001431836.1 CDS Rcas_1726 NC_009767.1 2221449 2222324 R KEGG: rrs:RoseRS_1004 hypothetical protein; hypothetical protein complement(2221449..2222324) Roseiflexus castenholzii DSM 13941 5539204 YP_001431837.1 CDS Rcas_1727 NC_009767.1 2222609 2223475 D TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_1003 sortase family protein; sortase family protein 2222609..2223475 Roseiflexus castenholzii DSM 13941 5539205 YP_001431838.1 CDS Rcas_1728 NC_009767.1 2223509 2225428 D TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_1002 conserved repeat domain; hypothetical protein 2223509..2225428 Roseiflexus castenholzii DSM 13941 5539206 YP_001431839.1 CDS Rcas_1729 NC_009767.1 2225823 2226467 D Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2225823..2226467 Roseiflexus castenholzii DSM 13941 5539207 YP_001431840.1 CDS Rcas_1730 NC_009767.1 2226464 2226994 R TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_2141 small GTP-binding protein; small GTP-binding protein complement(2226464..2226994) Roseiflexus castenholzii DSM 13941 5539208 YP_001431841.1 CDS Rcas_1731 NC_009767.1 2227021 2227842 R KEGG: rrs:RoseRS_2140 hypothetical protein; hypothetical protein complement(2227021..2227842) Roseiflexus castenholzii DSM 13941 5539209 YP_001431842.1 CDS Rcas_1732 NC_009767.1 2227873 2228814 R PFAM: protein of unknown function DUF1385; KEGG: rrs:RoseRS_2139 protein of unknown function DUF1385; hypothetical protein complement(2227873..2228814) Roseiflexus castenholzii DSM 13941 5539210 YP_001431843.1 CDS Rcas_1733 NC_009767.1 2228968 2229411 R KEGG: rrs:RoseRS_2138 hypothetical protein; hypothetical protein complement(2228968..2229411) Roseiflexus castenholzii DSM 13941 5539211 YP_001431844.1 CDS Rcas_1734 NC_009767.1 2229474 2229722 R KEGG: rrs:RoseRS_2137 hypothetical protein; hypothetical protein complement(2229474..2229722) Roseiflexus castenholzii DSM 13941 5539212 YP_001431845.1 CDS mnmA NC_009767.1 2229739 2230890 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(2229739..2230890) Roseiflexus castenholzii DSM 13941 5539213 YP_001431846.1 CDS Rcas_1736 NC_009767.1 2231121 2232071 R TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_2135 mevalonate kinase; mevalonate kinase complement(2231121..2232071) Roseiflexus castenholzii DSM 13941 5539214 YP_001431847.1 CDS Rcas_1737 NC_009767.1 2232439 2235513 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rrs:RoseRS_2134 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(2232439..2235513) Roseiflexus castenholzii DSM 13941 5539215 YP_001431848.1 CDS Rcas_1738 NC_009767.1 2235564 2236382 R TIGRFAM: DNA binding domain, excisionase family; KEGG: rrs:RoseRS_2133 DNA binding domain, excisionase family; DNA binding domain-containing protein complement(2235564..2236382) Roseiflexus castenholzii DSM 13941 5539216 YP_001431849.1 CDS guaA NC_009767.1 2236456 2237994 R contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase complement(2236456..2237994) Roseiflexus castenholzii DSM 13941 5539217 YP_001431850.1 CDS Rcas_1740 NC_009767.1 2239997 2240476 D TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_2131 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase SixA 2239997..2240476 Roseiflexus castenholzii DSM 13941 5539218 YP_001431851.1 CDS Rcas_1741 NC_009767.1 2240701 2242587 R KEGG: rrs:RoseRS_2129 hypothetical protein; hypothetical protein complement(2240701..2242587) Roseiflexus castenholzii DSM 13941 5539219 YP_001431852.1 CDS Rcas_1742 NC_009767.1 2244567 2245151 R KEGG: rrs:RoseRS_2127 uncharacterized metal-binding protein-like protein; hypothetical protein complement(2244567..2245151) Roseiflexus castenholzii DSM 13941 5539220 YP_001431853.1 CDS Rcas_1743 NC_009767.1 2245385 2245777 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2126 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2245385..2245777) Roseiflexus castenholzii DSM 13941 5539221 YP_001431854.1 CDS Rcas_1744 NC_009767.1 2247172 2248611 D PFAM: AAA-4 family protein; KEGG: rrs:RoseRS_2125 transcriptional regulator; transcriptional regulator 2247172..2248611 Roseiflexus castenholzii DSM 13941 5539222 YP_001431855.1 CDS Rcas_1745 NC_009767.1 2248596 2249225 R PFAM: peptidase S16 lon domain protein; KEGG: rrs:RoseRS_2124 peptidase S16, lon domain protein; peptidase S16 lon domain-containing protein complement(2248596..2249225) Roseiflexus castenholzii DSM 13941 5539223 YP_001431856.1 CDS Rcas_1746 NC_009767.1 2249283 2249999 D PFAM: lipolytic protein G-D-S-L family; KEGG: rrs:RoseRS_2123 lipolytic enzyme, G-D-S-L family; GDSL family lipase 2249283..2249999 Roseiflexus castenholzii DSM 13941 5539224 YP_001431857.1 CDS Rcas_1747 NC_009767.1 2250211 2250939 D KEGG: rrs:RoseRS_2122 hypothetical protein; hypothetical protein 2250211..2250939 Roseiflexus castenholzii DSM 13941 5539225 YP_001431858.1 CDS Rcas_1748 NC_009767.1 2251573 2252871 D SMART: AAA ATPase; KEGG: rrs:RoseRS_2121 AAA ATPase; ATPase AAA 2251573..2252871 Roseiflexus castenholzii DSM 13941 5539226 YP_001431859.1 CDS aat NC_009767.1 2252887 2253480 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2252887..2253480 Roseiflexus castenholzii DSM 13941 5539227 YP_001431860.1 CDS Rcas_1750 NC_009767.1 2253487 2254743 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2119 2-alkenal reductase; 2-alkenal reductase complement(2253487..2254743) Roseiflexus castenholzii DSM 13941 5539228 YP_001431861.1 CDS Rcas_1751 NC_009767.1 2254755 2255690 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; domain of unknown function DUF1731; KEGG: rrs:RoseRS_2118 domain of unknown function DUF1731; hypothetical protein complement(2254755..2255690) Roseiflexus castenholzii DSM 13941 5539229 YP_001431862.1 CDS Rcas_1752 NC_009767.1 2255894 2256907 R PFAM: Squalene/phytoene synthase; KEGG: rrs:RoseRS_2117 squalene/phytoene synthase; squalene/phytoene synthase complement(2255894..2256907) Roseiflexus castenholzii DSM 13941 5539230 YP_001431863.1 CDS Rcas_1753 NC_009767.1 2257181 2258140 R PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2116 regulatory protein, MerR; regulatory protein MerR complement(2257181..2258140) Roseiflexus castenholzii DSM 13941 5539231 YP_001431864.1 CDS Rcas_1754 NC_009767.1 2258340 2259227 R KEGG: rrs:RoseRS_2115 hypothetical protein; hypothetical protein complement(2258340..2259227) Roseiflexus castenholzii DSM 13941 5539232 YP_001431865.1 CDS Rcas_1755 NC_009767.1 2259414 2260244 R PFAM: UbiE/COQ5 methyltransferase; protein of unknown function DUF343; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2114 methyltransferase type 11; type 11 methyltransferase complement(2259414..2260244) Roseiflexus castenholzii DSM 13941 5539233 YP_001431866.1 CDS Rcas_1756 NC_009767.1 2260237 2260644 R PFAM: protein of unknown function DUF309; KEGG: rrs:RoseRS_2113 protein of unknown function DUF309; hypothetical protein complement(2260237..2260644) Roseiflexus castenholzii DSM 13941 5539234 YP_001431867.1 CDS Rcas_1757 NC_009767.1 2260644 2261048 R PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_2112 rhodanese domain protein; rhodanese domain-containing protein complement(2260644..2261048) Roseiflexus castenholzii DSM 13941 5539235 YP_001431868.1 CDS Rcas_1758 NC_009767.1 2261089 2261541 R TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rrs:RoseRS_2111 iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein complement(2261089..2261541) Roseiflexus castenholzii DSM 13941 5539236 YP_001431869.1 CDS Rcas_1759 NC_009767.1 2261687 2262757 R KEGG: rrs:RoseRS_2110 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A complement(2261687..2262757) Roseiflexus castenholzii DSM 13941 5539237 YP_001431870.1 CDS Rcas_1760 NC_009767.1 2262766 2263869 R PFAM: protein of unknown function DUF59; KEGG: rrs:RoseRS_2109 protein of unknown function DUF59; hypothetical protein complement(2262766..2263869) Roseiflexus castenholzii DSM 13941 5539238 YP_001431871.1 CDS Rcas_1761 NC_009767.1 2264244 2265212 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2108 ABC transporter related; ABC transporter-like protein complement(2264244..2265212) Roseiflexus castenholzii DSM 13941 5539239 YP_001431872.1 CDS Rcas_1762 NC_009767.1 2265345 2266319 R PFAM: UspA domain protein; KEGG: rrs:RoseRS_2107 UspA domain protein; UspA domain-containing protein complement(2265345..2266319) Roseiflexus castenholzii DSM 13941 5539240 YP_001431873.1 CDS Rcas_1763 NC_009767.1 2266316 2267251 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2106 ABC transporter related; ABC transporter-like protein complement(2266316..2267251) Roseiflexus castenholzii DSM 13941 5539241 YP_001431874.1 CDS Rcas_1764 NC_009767.1 2267248 2268018 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2105 alpha/beta hydrolase fold; alpha/beta hydrolase complement(2267248..2268018) Roseiflexus castenholzii DSM 13941 5539242 YP_001431875.1 CDS Rcas_1765 NC_009767.1 2268027 2269652 R PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_2104 secretion protein HlyD family protein; secretion protein HlyD family protein complement(2268027..2269652) Roseiflexus castenholzii DSM 13941 5539243 YP_001431876.1 CDS Rcas_1766 NC_009767.1 2269672 2270784 R PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2479 ABC-2 type transporter; ABC-2 type transporter complement(2269672..2270784) Roseiflexus castenholzii DSM 13941 5539244 YP_001431877.1 CDS Rcas_1767 NC_009767.1 2270784 2271413 R PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_2103 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2270784..2271413) Roseiflexus castenholzii DSM 13941 5539245 YP_001431878.1 CDS Rcas_1768 NC_009767.1 2271894 2274272 D PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2102 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2271894..2274272 Roseiflexus castenholzii DSM 13941 5539246 YP_001431879.1 CDS Rcas_1769 NC_009767.1 2274284 2274700 D subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit B 2274284..2274700 Roseiflexus castenholzii DSM 13941 5539247 YP_001431880.1 CDS Rcas_1770 NC_009767.1 2274705 2275052 D subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2274705..2275052 Roseiflexus castenholzii DSM 13941 5539248 YP_001431881.1 CDS Rcas_1771 NC_009767.1 2275090 2276592 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2099 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2275090..2276592 Roseiflexus castenholzii DSM 13941 5539249 YP_001431882.1 CDS Rcas_1772 NC_009767.1 2276602 2277072 D subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit E 2276602..2277072 Roseiflexus castenholzii DSM 13941 5539250 YP_001431883.1 CDS Rcas_1773 NC_009767.1 2277072 2277335 D PFAM: multiple resistance and pH regulation protein F; KEGG: rrs:RoseRS_2097 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 2277072..2277335 Roseiflexus castenholzii DSM 13941 5539251 YP_001431884.1 CDS Rcas_1774 NC_009767.1 2277332 2277763 D TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: rrs:RoseRS_2096 monovalent cation/proton antiporter, MnhG/PhaG subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2277332..2277763 Roseiflexus castenholzii DSM 13941 5539252 YP_001431885.1 CDS Rcas_1775 NC_009767.1 2278252 2279829 R PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2094 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase complement(2278252..2279829) Roseiflexus castenholzii DSM 13941 5539253 YP_001431886.1 CDS Rcas_1776 NC_009767.1 2279886 2280407 R PFAM: Acetone carboxylase gamma subunit; KEGG: rrs:RoseRS_2093 acetone carboxylase gamma subunit-like protein; acetone carboxylase subunit gamma complement(2279886..2280407) Roseiflexus castenholzii DSM 13941 5539254 YP_001431887.1 CDS Rcas_1777 NC_009767.1 2280391 2282604 R PFAM: Hydantoinase B/oxoprolinase; KEGG: rrs:RoseRS_2092 hydantoinase B/oxoprolinase; hydantoinase B/oxoprolinase complement(2280391..2282604) Roseiflexus castenholzii DSM 13941 5539255 YP_001431888.1 CDS Rcas_1778 NC_009767.1 2282648 2284795 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_2091 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase complement(2282648..2284795) Roseiflexus castenholzii DSM 13941 5539256 YP_001431889.1 CDS Rcas_1779 NC_009767.1 2284958 2285893 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rrs:RoseRS_2090 helix-turn-helix-domain containing protein, AraC type; AraC family transcriptional regulator 2284958..2285893 Roseiflexus castenholzii DSM 13941 5539257 YP_001431890.1 CDS Rcas_1780 NC_009767.1 2286342 2287703 R PFAM: cation transporter; KEGG: rrs:RoseRS_2088 H(+)-transporting two-sector ATPase; H(+)-transporting two-sector ATPase complement(2286342..2287703) Roseiflexus castenholzii DSM 13941 5539258 YP_001431891.1 CDS Rcas_1781 NC_009767.1 2287700 2288368 R PFAM: TrkA-N domain protein; TrkA-C domain protein; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_2087 TrkA-N domain protein; TrkA domain-containing protein complement(2287700..2288368) Roseiflexus castenholzii DSM 13941 5539259 YP_001431892.1 CDS Rcas_1782 NC_009767.1 2288455 2288685 R PFAM: regulatory protein AsnC/Lrp family; KEGG: rrs:RoseRS_2086 transcriptional regulator, AsnC family; AsnC family transcriptional regulator complement(2288455..2288685) Roseiflexus castenholzii DSM 13941 5539260 YP_001431893.1 CDS Rcas_1783 NC_009767.1 2289090 2289260 D KEGG: rrs:RoseRS_2085 hypothetical protein; hypothetical protein 2289090..2289260 Roseiflexus castenholzii DSM 13941 5539261 YP_001431894.1 CDS Rcas_1784 NC_009767.1 2289415 2291187 D PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2084 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 2289415..2291187 Roseiflexus castenholzii DSM 13941 5539262 YP_001431895.1 CDS Rcas_1785 NC_009767.1 2291294 2292505 D KEGG: rrs:RoseRS_2083 hypothetical protein; hypothetical protein 2291294..2292505 Roseiflexus castenholzii DSM 13941 5539263 YP_001431896.1 CDS Rcas_1786 NC_009767.1 2292507 2293673 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_2082 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2292507..2293673 Roseiflexus castenholzii DSM 13941 5539264 YP_001431897.1 CDS Rcas_1787 NC_009767.1 2293779 2295347 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2074 GAF sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2293779..2295347 Roseiflexus castenholzii DSM 13941 5539265 YP_001431898.1 CDS Rcas_1788 NC_009767.1 2295554 2296165 R KEGG: rrs:RoseRS_2073 cation efflux protein; cation efflux protein complement(2295554..2296165) Roseiflexus castenholzii DSM 13941 5539266 YP_001431899.1 CDS Rcas_1789 NC_009767.1 2296162 2296416 R KEGG: rrs:RoseRS_2072 hypothetical protein; hypothetical protein complement(2296162..2296416) Roseiflexus castenholzii DSM 13941 5539267 YP_001431900.1 CDS Rcas_1790 NC_009767.1 2296728 2296940 R PFAM: protein of unknown function DUF1458; KEGG: rrs:RoseRS_2071 protein of unknown function DUF1458; hypothetical protein complement(2296728..2296940) Roseiflexus castenholzii DSM 13941 5539268 YP_001431901.1 CDS Rcas_1791 NC_009767.1 2297037 2297528 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rrs:RoseRS_2070 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(2297037..2297528) Roseiflexus castenholzii DSM 13941 5539269 YP_001431902.1 CDS Rcas_1792 NC_009767.1 2298941 2300215 D KEGG: rrs:RoseRS_2069 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 2298941..2300215 Roseiflexus castenholzii DSM 13941 5539270 YP_001431903.1 CDS Rcas_1793 NC_009767.1 2300238 2303753 R PFAM: cyclic nucleotide-binding; peptidase M50; KEGG: rrs:RoseRS_2624 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(2300238..2303753) Roseiflexus castenholzii DSM 13941 5539271 YP_001431904.1 CDS Rcas_1794 NC_009767.1 2304555 2305316 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2623 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2304555..2305316 Roseiflexus castenholzii DSM 13941 5539272 YP_001431905.1 CDS Rcas_1795 NC_009767.1 2305322 2308267 D KEGG: rrs:RoseRS_2622 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; phosphoribosylformylglycinamidine synthase II 2305322..2308267 Roseiflexus castenholzii DSM 13941 5539273 YP_001431906.1 CDS Rcas_1796 NC_009767.1 2308290 2309108 D KEGG: rrs:RoseRS_2621 hypothetical protein; hypothetical protein 2308290..2309108 Roseiflexus castenholzii DSM 13941 5539274 YP_001431907.1 CDS Rcas_1797 NC_009767.1 2309108 2309830 D KEGG: rrs:RoseRS_2620 hypothetical protein; hypothetical protein 2309108..2309830 Roseiflexus castenholzii DSM 13941 5539275 YP_001431908.1 CDS Rcas_1798 NC_009767.1 2309901 2310554 R PFAM: O-methyltransferase family 3; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2619 O-methyltransferase, family 3; O-methyltransferase family protein complement(2309901..2310554) Roseiflexus castenholzii DSM 13941 5539276 YP_001431909.1 CDS Rcas_1799 NC_009767.1 2310805 2311524 D PFAM: esterase; KEGG: rrs:RoseRS_2618 esterase; esterase 2310805..2311524 Roseiflexus castenholzii DSM 13941 5539277 YP_001431910.1 CDS Rcas_1800 NC_009767.1 2311554 2312513 D KEGG: rrs:RoseRS_2617 hypothetical protein; hypothetical protein 2311554..2312513 Roseiflexus castenholzii DSM 13941 5539278 YP_001431911.1 CDS Rcas_1801 NC_009767.1 2312737 2314134 D PFAM: protein of unknown function DUF407; KEGG: rrs:RoseRS_2616 protein of unknown function DUF407; hypothetical protein 2312737..2314134 Roseiflexus castenholzii DSM 13941 5539279 YP_001431912.1 CDS Rcas_1802 NC_009767.1 2314131 2315270 D ATP-dependent carboxylate-amine ligase; carboxylate-amine ligase 2314131..2315270 Roseiflexus castenholzii DSM 13941 5539280 YP_001431913.1 CDS Rcas_1803 NC_009767.1 2315369 2316361 R KEGG: rrs:RoseRS_2614 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-ACP synthase complement(2315369..2316361) Roseiflexus castenholzii DSM 13941 5539281 YP_001431914.1 CDS Rcas_1804 NC_009767.1 2316443 2316640 R TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: rrs:RoseRS_2613 ribosomal protein L32; 50S ribosomal protein L32 complement(2316443..2316640) Roseiflexus castenholzii DSM 13941 5539282 YP_001431915.1 CDS Rcas_1805 NC_009767.1 2316660 2317208 R PFAM: protein of unknown function DUF177; KEGG: rrs:RoseRS_2612 protein of unknown function DUF177; hypothetical protein complement(2316660..2317208) Roseiflexus castenholzii DSM 13941 5539283 YP_001431916.1 CDS Rcas_1806 NC_009767.1 2317274 2317651 R KEGG: rrs:RoseRS_2611 hypothetical protein; hypothetical protein complement(2317274..2317651) Roseiflexus castenholzii DSM 13941 5539284 YP_001431917.1 CDS coaD NC_009767.1 2317715 2318197 R Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase complement(2317715..2318197) Roseiflexus castenholzii DSM 13941 5539285 YP_001431918.1 CDS Rcas_1808 NC_009767.1 2318294 2318869 R TIGRFAM: methyltransferase; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2609 methyltransferase; methyltransferase complement(2318294..2318869) Roseiflexus castenholzii DSM 13941 5539286 YP_001431919.1 CDS Rcas_1810 NC_009767.1 2319454 2320443 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tel:tlr1878 DNA-methyltransferase; DNA methylase N-4/N-6 domain-containing protein complement(2319454..2320443) Roseiflexus castenholzii DSM 13941 5539288 YP_001431920.1 CDS Rcas_1811 NC_009767.1 2320440 2321804 R PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_2608 aminotransferase class-III; class III aminotransferase complement(2320440..2321804) Roseiflexus castenholzii DSM 13941 5539289 YP_001431921.1 CDS Rcas_1812 NC_009767.1 2321804 2322538 R PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2607 metallophosphoesterase; metallophosphoesterase complement(2321804..2322538) Roseiflexus castenholzii DSM 13941 5539290 YP_001431922.1 CDS Rcas_1813 NC_009767.1 2322755 2324392 D KEGG: rrs:RoseRS_2606 hypothetical protein; hypothetical protein 2322755..2324392 Roseiflexus castenholzii DSM 13941 5539291 YP_001431923.1 CDS Rcas_1814 NC_009767.1 2324394 2324729 R KEGG: rrs:RoseRS_2605 hypothetical protein; hypothetical protein complement(2324394..2324729) Roseiflexus castenholzii DSM 13941 5539292 YP_001431924.1 CDS Rcas_1815 NC_009767.1 2324726 2324959 R KEGG: rrs:RoseRS_2604 hypothetical protein; hypothetical protein complement(2324726..2324959) Roseiflexus castenholzii DSM 13941 5539293 YP_001431925.1 CDS Rcas_1816 NC_009767.1 2324977 2325489 R PFAM: protein of unknown function DUF83; KEGG: rrs:RoseRS_2603 hypothetical protein; hypothetical protein complement(2324977..2325489) Roseiflexus castenholzii DSM 13941 5539294 YP_001431926.1 CDS Rcas_1817 NC_009767.1 2325493 2325741 R KEGG: rrs:RoseRS_2602 hypothetical protein; hypothetical protein complement(2325493..2325741) Roseiflexus castenholzii DSM 13941 5539295 YP_001431927.1 CDS Rcas_1818 NC_009767.1 2325760 2326875 R PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2601 peptidase M50; peptidase M50 complement(2325760..2326875) Roseiflexus castenholzii DSM 13941 5539296 YP_001431928.1 CDS Rcas_1819 NC_009767.1 2328255 2328869 D PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2738 beta-lactamase domain protein; beta-lactamase domain-containing protein 2328255..2328869 Roseiflexus castenholzii DSM 13941 5539297 YP_001431929.1 CDS Rcas_1820 NC_009767.1 2328879 2330114 D KEGG: rrs:RoseRS_2739 membrane protein-like protein; hypothetical protein 2328879..2330114 Roseiflexus castenholzii DSM 13941 5539298 YP_001431930.1 CDS Rcas_1821 NC_009767.1 2330111 2330509 D KEGG: rrs:RoseRS_2740 protein of unknown function DUF820; hypothetical protein 2330111..2330509 Roseiflexus castenholzii DSM 13941 5539299 YP_001431931.1 CDS Rcas_1822 NC_009767.1 2330961 2331845 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_2741 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2330961..2331845 Roseiflexus castenholzii DSM 13941 5539300 YP_001431932.1 CDS Rcas_1823 NC_009767.1 2331856 2332902 D PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: rrs:RoseRS_2742 agmatine deiminase; agmatine deiminase 2331856..2332902 Roseiflexus castenholzii DSM 13941 5539301 YP_001431933.1 CDS Rcas_1824 NC_009767.1 2332919 2333839 R PFAM: protein of unknown function DUF92 transmembrane; KEGG: rrs:RoseRS_2743 protein of unknown function DUF92, transmembrane; hypothetical protein complement(2332919..2333839) Roseiflexus castenholzii DSM 13941 5539302 YP_001431934.1 CDS Rcas_1825 NC_009767.1 2334192 2334704 R PFAM: cyclase/dehydrase; KEGG: rrs:RoseRS_2744 cyclase/dehydrase; cyclase/dehydrase complement(2334192..2334704) Roseiflexus castenholzii DSM 13941 5539303 YP_001431935.1 CDS Rcas_1826 NC_009767.1 2335167 2335352 D KEGG: rrs:RoseRS_2745 hypothetical protein; hypothetical protein 2335167..2335352 Roseiflexus castenholzii DSM 13941 5539304 YP_001431936.1 CDS Rcas_1827 NC_009767.1 2335433 2336305 D KEGG: rrs:RoseRS_2746 hypothetical protein; hypothetical protein 2335433..2336305 Roseiflexus castenholzii DSM 13941 5539305 YP_001431937.1 CDS Rcas_1828 NC_009767.1 2336606 2338195 R PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_2748 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(2336606..2338195) Roseiflexus castenholzii DSM 13941 5539306 YP_001431938.1 CDS Rcas_1829 NC_009767.1 2338247 2339041 D PFAM: protein of unknown function DUF990; KEGG: sma:SAV5180 hypothetical protein; hypothetical protein 2338247..2339041 Roseiflexus castenholzii DSM 13941 5539307 YP_001431939.1 CDS Rcas_1830 NC_009767.1 2339041 2339838 D PFAM: protein of unknown function DUF990; KEGG: reu:Reut_A1067 protein of unknown function DUF990; hypothetical protein 2339041..2339838 Roseiflexus castenholzii DSM 13941 5539308 YP_001431940.1 CDS Rcas_1831 NC_009767.1 2339845 2340258 R KEGG: rrs:RoseRS_2747 hypothetical protein; hypothetical protein complement(2339845..2340258) Roseiflexus castenholzii DSM 13941 5539309 YP_001431941.1 CDS Rcas_1832 NC_009767.1 2340343 2341350 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2664 ABC transporter ATP-binding protein; ABC transporter-like protein 2340343..2341350 Roseiflexus castenholzii DSM 13941 5539310 YP_001431942.1 CDS Rcas_1833 NC_009767.1 2341366 2341923 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1412 protein of unknown function DUF820; hypothetical protein complement(2341366..2341923) Roseiflexus castenholzii DSM 13941 5539311 YP_001431943.1 CDS Rcas_1834 NC_009767.1 2342051 2343832 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2749 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2342051..2343832 Roseiflexus castenholzii DSM 13941 5539312 YP_001431944.1 CDS Rcas_1835 NC_009767.1 2343853 2344998 D PFAM: amidohydrolase 2; KEGG: rrs:RoseRS_2750 amidohydrolase 2; amidohydrolase 2343853..2344998 Roseiflexus castenholzii DSM 13941 5539313 YP_001431945.1 CDS Rcas_1836 NC_009767.1 2344995 2346233 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2751 major facilitator superfamily MFS_1; major facilitator transporter 2344995..2346233 Roseiflexus castenholzii DSM 13941 5539314 YP_001431946.1 CDS Rcas_1837 NC_009767.1 2346377 2347156 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_2752 phosphoglycolate phosphatase; phosphoglycolate phosphatase 2346377..2347156 Roseiflexus castenholzii DSM 13941 5539315 YP_001431947.1 CDS Rcas_1838 NC_009767.1 2347417 2348541 D KEGG: rrs:RoseRS_2075 hypothetical protein; hypothetical protein 2347417..2348541 Roseiflexus castenholzii DSM 13941 5539316 YP_001431948.1 CDS Rcas_1839 NC_009767.1 2348592 2349680 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2548 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2348592..2349680) Roseiflexus castenholzii DSM 13941 5539317 YP_001431949.1 CDS Rcas_1840 NC_009767.1 2349683 2351029 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_2549 peptidase M20; peptidase M20 complement(2349683..2351029) Roseiflexus castenholzii DSM 13941 5539318 YP_001431950.1 CDS Rcas_1841 NC_009767.1 2351159 2352307 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_2550 PHP C-terminal domain protein; phosphotransferase domain-containing protein 2351159..2352307 Roseiflexus castenholzii DSM 13941 5539319 YP_001431951.1 CDS Rcas_1842 NC_009767.1 2353328 2354359 R KEGG: rrs:RoseRS_2551 hypothetical protein; hypothetical protein complement(2353328..2354359) Roseiflexus castenholzii DSM 13941 5539320 YP_001431952.1 CDS Rcas_1843 NC_009767.1 2354340 2355089 R PFAM: SAICAR synthetase; KEGG: rrs:RoseRS_2552 phosphoribosylaminoimidazolesuccinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(2354340..2355089) Roseiflexus castenholzii DSM 13941 5539321 YP_001431953.1 CDS Rcas_1844 NC_009767.1 2355945 2356970 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2355945..2356970) Roseiflexus castenholzii DSM 13941 5539322 YP_001431954.1 CDS Rcas_1845 NC_009767.1 2357080 2357724 D KEGG: rrs:RoseRS_2555 hypothetical protein; hypothetical protein 2357080..2357724 Roseiflexus castenholzii DSM 13941 5539323 YP_001431955.1 CDS Rcas_1846 NC_009767.1 2357721 2358131 D hypothetical protein 2357721..2358131 Roseiflexus castenholzii DSM 13941 5539324 YP_001431956.1 CDS Rcas_1847 NC_009767.1 2358309 2360648 D TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: rrs:RoseRS_2556 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2358309..2360648 Roseiflexus castenholzii DSM 13941 5539325 YP_001431957.1 CDS Rcas_1848 NC_009767.1 2360928 2362031 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2360928..2362031 Roseiflexus castenholzii DSM 13941 5539326 YP_001431958.1 CDS Rcas_1849 NC_009767.1 2362197 2363273 D PFAM: regulatory protein LacI; helix-turn-helix domain protein; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_2559 alanine racemase; LacI family transcriptional regulator 2362197..2363273 Roseiflexus castenholzii DSM 13941 5539327 YP_001431959.1 CDS Rcas_1850 NC_009767.1 2363285 2363536 D KEGG: rrs:RoseRS_2560 hypothetical protein; hypothetical protein 2363285..2363536 Roseiflexus castenholzii DSM 13941 5539328 YP_001431960.1 CDS Rcas_1851 NC_009767.1 2363517 2364638 R KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein; glucose-6-phosphate dehydrogenase complement(2363517..2364638) Roseiflexus castenholzii DSM 13941 5539329 YP_001431961.1 CDS Rcas_1852 NC_009767.1 2364635 2366191 R KEGG: rrs:RoseRS_2562 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(2364635..2366191) Roseiflexus castenholzii DSM 13941 5539330 YP_001431962.1 CDS Rcas_1853 NC_009767.1 2366219 2368813 R KEGG: rrs:RoseRS_2563 hypothetical protein; hypothetical protein complement(2366219..2368813) Roseiflexus castenholzii DSM 13941 5539331 YP_001431963.1 CDS Rcas_1854 NC_009767.1 2368904 2369188 D PFAM: protein of unknown function DUF427; KEGG: rrs:RoseRS_2564 protein of unknown function DUF427; hypothetical protein 2368904..2369188 Roseiflexus castenholzii DSM 13941 5539332 YP_001431964.1 CDS Rcas_1855 NC_009767.1 2369239 2369943 R PFAM: protein of unknown function DUF162; KEGG: rrs:RoseRS_2565 protein of unknown function DUF162; hypothetical protein complement(2369239..2369943) Roseiflexus castenholzii DSM 13941 5539333 YP_001431965.1 CDS Rcas_1856 NC_009767.1 2370402 2371499 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2566 anti-sigma-factor antagonist; anti-sigma-factor antagonist 2370402..2371499 Roseiflexus castenholzii DSM 13941 5539334 YP_001431966.1 CDS Rcas_1857 NC_009767.1 2371496 2372104 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4336 protein of unknown function DUF820; hypothetical protein 2371496..2372104 Roseiflexus castenholzii DSM 13941 5539335 YP_001431967.1 CDS Rcas_1858 NC_009767.1 2372358 2374970 R PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_2585 protein of unknown function DUF214; hypothetical protein complement(2372358..2374970) Roseiflexus castenholzii DSM 13941 5539336 YP_001431968.1 CDS Rcas_1859 NC_009767.1 2374967 2376616 R PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_2586 amidohydrolase 3; amidohydrolase complement(2374967..2376616) Roseiflexus castenholzii DSM 13941 5539337 YP_001431969.1 CDS Rcas_1860 NC_009767.1 2376868 2378097 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: ppd:Ppro_1454 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 2376868..2378097 Roseiflexus castenholzii DSM 13941 5539338 YP_001431970.1 CDS Rcas_1861 NC_009767.1 2378160 2380103 D TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sat:SYN_00267 molybdopterin biosynthesis protein; molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 2378160..2380103 Roseiflexus castenholzii DSM 13941 5539339 YP_001431971.1 CDS Rcas_1862 NC_009767.1 2380185 2380463 R TIGRFAM: MoaD family protein; PFAM: thiamineS protein; KEGG: pas:Pars_0825 MoaD family protein; MoaD family protein complement(2380185..2380463) Roseiflexus castenholzii DSM 13941 5539340 YP_001431972.1 CDS Rcas_1863 NC_009767.1 2380529 2382358 R PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: tth:TTC1834 tungsten-containing aldehyde ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase complement(2380529..2382358) Roseiflexus castenholzii DSM 13941 5539341 YP_001431973.1 CDS Rcas_1864 NC_009767.1 2382778 2384214 D PFAM: amine oxidase; KEGG: rrs:RoseRS_2594 amine oxidase; amine oxidase 2382778..2384214 Roseiflexus castenholzii DSM 13941 5539342 YP_001431974.1 CDS Rcas_1865 NC_009767.1 2384227 2384844 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2595 protein of unknown function DUF820; hypothetical protein 2384227..2384844 Roseiflexus castenholzii DSM 13941 5539343 YP_001431975.1 CDS Rcas_1866 NC_009767.1 2384854 2386416 D PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_2596 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 2384854..2386416 Roseiflexus castenholzii DSM 13941 5539344 YP_001431976.1 CDS Rcas_1867 NC_009767.1 2386418 2387914 D PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: rrs:RoseRS_2597 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 2386418..2387914 Roseiflexus castenholzii DSM 13941 5539345 YP_001431977.1 CDS Rcas_1868 NC_009767.1 2388335 2388553 R KEGG: rrs:RoseRS_2598 hypothetical protein; hypothetical protein complement(2388335..2388553) Roseiflexus castenholzii DSM 13941 5539346 YP_001431978.1 CDS Rcas_1869 NC_009767.1 2388858 2390783 R SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2600 protein kinase; serine/threonine protein kinase complement(2388858..2390783) Roseiflexus castenholzii DSM 13941 5539347 YP_001431979.1 CDS Rcas_1870 NC_009767.1 2391084 2399678 R PFAM: carbohydrate binding; glycosyltransferase 36; glycosyltransferase 36 associated; KEGG: rrs:RoseRS_2737 glycosyltransferase 36; glycosyltransferase complement(2391084..2399678) Roseiflexus castenholzii DSM 13941 5539348 YP_001431980.1 CDS Rcas_1871 NC_009767.1 2399925 2400329 R KEGG: rrs:RoseRS_2736 hypothetical protein; hypothetical protein complement(2399925..2400329) Roseiflexus castenholzii DSM 13941 5539349 YP_001431981.1 CDS Rcas_1872 NC_009767.1 2400601 2401986 R KEGG: rrs:RoseRS_2537 hypothetical protein; hypothetical protein complement(2400601..2401986) Roseiflexus castenholzii DSM 13941 5539350 YP_001431982.1 CDS Rcas_1873 NC_009767.1 2402268 2402678 D hypothetical protein 2402268..2402678 Roseiflexus castenholzii DSM 13941 5539351 YP_001431983.1 CDS Rcas_1874 NC_009767.1 2402803 2405490 R PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: rrs:RoseRS_2735 alpha-L-rhamnosidase; alpha-L-rhamnosidase complement(2402803..2405490) Roseiflexus castenholzii DSM 13941 5539352 YP_001431984.1 CDS Rcas_1875 NC_009767.1 2405487 2407721 R KEGG: rrs:RoseRS_2734 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(2405487..2407721) Roseiflexus castenholzii DSM 13941 5539353 YP_001431985.1 CDS Rcas_1876 NC_009767.1 2409812 2410309 D TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: rrs:RoseRS_2733 hydrogenase maturation protease; hydrogenase maturation protease 2409812..2410309 Roseiflexus castenholzii DSM 13941 5539354 YP_001431986.1 CDS Rcas_1877 NC_009767.1 2410306 2411187 R PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2899 metallophosphoesterase; metallophosphoesterase complement(2410306..2411187) Roseiflexus castenholzii DSM 13941 5539355 YP_001431987.1 CDS Rcas_1879 NC_009767.1 2412968 2414326 D PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2896 extracellular solute-binding protein, family 1; extracellular solute-binding protein 2412968..2414326 Roseiflexus castenholzii DSM 13941 5539357 YP_001431988.1 CDS Rcas_1880 NC_009767.1 2414409 2415359 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2895 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2414409..2415359 Roseiflexus castenholzii DSM 13941 5539358 YP_001431989.1 CDS Rcas_1881 NC_009767.1 2415371 2416264 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2894 binding-protein-dependent transport systems inner membrane component; monosaccharide-transporting ATPase 2415371..2416264 Roseiflexus castenholzii DSM 13941 5539359 YP_001431990.1 CDS Rcas_1882 NC_009767.1 2416272 2417993 D PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: rrs:RoseRS_2893 FG-GAP repeat protein; ASPIC/UnbV domain-containing protein 2416272..2417993 Roseiflexus castenholzii DSM 13941 5539360 YP_001431991.1 CDS Rcas_1883 NC_009767.1 2418016 2418780 D KEGG: rrs:RoseRS_2892 hypothetical protein; hypothetical protein 2418016..2418780 Roseiflexus castenholzii DSM 13941 5539361 YP_001431992.1 CDS Rcas_1884 NC_009767.1 2418834 2420240 D PFAM: glycoside hydrolase family 4; KEGG: rrs:RoseRS_2891 glycoside hydrolase, family 4; glycoside hydrolase family protein 2418834..2420240 Roseiflexus castenholzii DSM 13941 5539362 YP_001431993.1 CDS Rcas_1885 NC_009767.1 2421536 2422603 R catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase complement(2421536..2422603) Roseiflexus castenholzii DSM 13941 5539363 YP_001431994.1 CDS Rcas_1886 NC_009767.1 2423959 2425134 R KEGG: rrs:RoseRS_2969 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(2423959..2425134) Roseiflexus castenholzii DSM 13941 5539364 YP_001431995.1 CDS Rcas_1887 NC_009767.1 2425189 2427612 R PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rrs:RoseRS_2970 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; NAD-binding 3-hydroxyacyl-CoA dehydrogenase complement(2425189..2427612) Roseiflexus castenholzii DSM 13941 5539365 YP_001431996.1 CDS Rcas_1888 NC_009767.1 2427697 2428953 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2971 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase complement(2427697..2428953) Roseiflexus castenholzii DSM 13941 5539366 YP_001431997.1 CDS Rcas_1889 NC_009767.1 2428964 2430058 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2972 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase complement(2428964..2430058) Roseiflexus castenholzii DSM 13941 5539367 YP_001431998.1 CDS Rcas_1890 NC_009767.1 2430077 2430628 R PFAM: Sterol-binding domain protein; KEGG: rrs:RoseRS_2973 hypothetical protein; sterol-binding domain-containing protein complement(2430077..2430628) Roseiflexus castenholzii DSM 13941 5539368 YP_001431999.1 CDS Rcas_1891 NC_009767.1 2431622 2432257 R KEGG: rrs:RoseRS_2974 hypothetical protein; hypothetical protein complement(2431622..2432257) Roseiflexus castenholzii DSM 13941 5539369 YP_001432000.1 CDS Rcas_1892 NC_009767.1 2432692 2433960 D PFAM: Extracellular ligand-binding receptor; KEGG: rrs:RoseRS_2975 extracellular ligand-binding receptor; extracellular ligand-binding receptor 2432692..2433960 Roseiflexus castenholzii DSM 13941 5539370 YP_001432001.1 CDS Rcas_1893 NC_009767.1 2434064 2435245 D PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2976 inner-membrane translocator; inner-membrane translocator 2434064..2435245 Roseiflexus castenholzii DSM 13941 5539371 YP_001432002.1 CDS Rcas_1894 NC_009767.1 2435250 2436614 D PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_2977 inner-membrane translocator; inner-membrane translocator 2435250..2436614 Roseiflexus castenholzii DSM 13941 5539372 YP_001432003.1 CDS Rcas_1895 NC_009767.1 2436626 2437420 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2978 ABC transporter related; ABC transporter-like protein 2436626..2437420 Roseiflexus castenholzii DSM 13941 5539373 YP_001432004.1 CDS Rcas_1896 NC_009767.1 2437646 2438359 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2979 ABC transporter related; ABC transporter-like protein 2437646..2438359 Roseiflexus castenholzii DSM 13941 5539374 YP_001432005.1 CDS Rcas_1897 NC_009767.1 2438563 2439126 D KEGG: rrs:RoseRS_2980 hypothetical protein; hypothetical protein 2438563..2439126 Roseiflexus castenholzii DSM 13941 5539375 YP_001432006.1 CDS Rcas_1898 NC_009767.1 2439142 2441691 R TIGRFAM: alanine racemase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; alanine racemase domain protein; Mur ligase middle domain protein; KEGG: rrs:RoseRS_2981 alanine racemase; alanine racemase complement(2439142..2441691) Roseiflexus castenholzii DSM 13941 5539376 YP_001432007.1 CDS Rcas_1899 NC_009767.1 2441874 2442143 D KEGG: rrs:RoseRS_2802 hypothetical protein; hypothetical protein 2441874..2442143 Roseiflexus castenholzii DSM 13941 5539377 YP_001432008.1 CDS Rcas_1900 NC_009767.1 2443794 2444900 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2982 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 2443794..2444900 Roseiflexus castenholzii DSM 13941 5539378 YP_001432009.1 CDS Rcas_1901 NC_009767.1 2445485 2446909 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2983 glutamine synthetase, type I; glutamine synthetase, type I 2445485..2446909 Roseiflexus castenholzii DSM 13941 5539379 YP_001432010.1 CDS Rcas_1902 NC_009767.1 2447243 2448679 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: rrs:RoseRS_2984 ammonium transporter; ammonium transporter 2447243..2448679 Roseiflexus castenholzii DSM 13941 5539380 YP_001432011.1 CDS Rcas_1903 NC_009767.1 2449122 2453762 D PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: rrs:RoseRS_2985 glutamate synthase (ferredoxin); glutamate synthase 2449122..2453762 Roseiflexus castenholzii DSM 13941 5539381 YP_001432012.1 CDS Rcas_1904 NC_009767.1 2453865 2454182 R KEGG: rrs:RoseRS_4498 hypothetical protein; hypothetical protein complement(2453865..2454182) Roseiflexus castenholzii DSM 13941 5539382 YP_001432013.1 CDS Rcas_1905 NC_009767.1 2454179 2454475 R hypothetical protein complement(2454179..2454475) Roseiflexus castenholzii DSM 13941 5539383 YP_001432014.1 CDS Rcas_1906 NC_009767.1 2454579 2454848 D hypothetical protein 2454579..2454848 Roseiflexus castenholzii DSM 13941 5539384 YP_001432015.1 CDS Rcas_1907 NC_009767.1 2455389 2455628 R hypothetical protein complement(2455389..2455628) Roseiflexus castenholzii DSM 13941 5539385 YP_001432016.1 CDS Rcas_1908 NC_009767.1 2455686 2455871 D hypothetical protein 2455686..2455871 Roseiflexus castenholzii DSM 13941 5539386 YP_001432017.1 CDS Rcas_1909 NC_009767.1 2456043 2456636 R hypothetical protein complement(2456043..2456636) Roseiflexus castenholzii DSM 13941 5539387 YP_001432018.1 CDS Rcas_1910 NC_009767.1 2457022 2457423 R hypothetical protein complement(2457022..2457423) Roseiflexus castenholzii DSM 13941 5539388 YP_001432019.1 CDS Rcas_1911 NC_009767.1 2457575 2458051 R hypothetical protein complement(2457575..2458051) Roseiflexus castenholzii DSM 13941 5539389 YP_001432020.1 CDS Rcas_1912 NC_009767.1 2458243 2458962 R KEGG: dge:Dgeo_2791 transcriptional regulator, LuxR family; LuxR family transcriptional regulator complement(2458243..2458962) Roseiflexus castenholzii DSM 13941 5539390 YP_001432021.1 CDS Rcas_1913 NC_009767.1 2459068 2459823 R hypothetical protein complement(2459068..2459823) Roseiflexus castenholzii DSM 13941 5539391 YP_001432022.1 CDS Rcas_1914 NC_009767.1 2459833 2460723 R hypothetical protein complement(2459833..2460723) Roseiflexus castenholzii DSM 13941 5539392 YP_001432023.1 CDS Rcas_1915 NC_009767.1 2460765 2461352 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sth:STH169 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 factor complement(2460765..2461352) Roseiflexus castenholzii DSM 13941 5539393 YP_001432024.1 CDS Rcas_1916 NC_009767.1 2461345 2462151 R KEGG: dge:Dgeo_2791 transcriptional regulator, LuxR family; response regulator receiver protein complement(2461345..2462151) Roseiflexus castenholzii DSM 13941 5539394 YP_001432025.1 CDS Rcas_1917 NC_009767.1 2462136 2462399 R KEGG: rrs:RoseRS_1219 hypothetical protein; hypothetical protein complement(2462136..2462399) Roseiflexus castenholzii DSM 13941 5539395 YP_001432026.1 CDS Rcas_1918 NC_009767.1 2462845 2463042 R hypothetical protein complement(2462845..2463042) Roseiflexus castenholzii DSM 13941 5539396 YP_001432027.1 CDS Rcas_1919 NC_009767.1 2463095 2463478 R PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3040 HEPN domain protein; HEPN domain-containing protein complement(2463095..2463478) Roseiflexus castenholzii DSM 13941 5539397 YP_001432028.1 CDS Rcas_1920 NC_009767.1 2463462 2463812 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3041 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(2463462..2463812) Roseiflexus castenholzii DSM 13941 5539398 YP_001432029.1 CDS Rcas_1921 NC_009767.1 2463821 2464141 R hypothetical protein complement(2463821..2464141) Roseiflexus castenholzii DSM 13941 5539399 YP_001432030.1 CDS Rcas_1922 NC_009767.1 2464126 2464389 R KEGG: rrs:RoseRS_1219 hypothetical protein; hypothetical protein complement(2464126..2464389) Roseiflexus castenholzii DSM 13941 5539400 YP_001432031.1 CDS Rcas_1923 NC_009767.1 2464835 2465896 R hypothetical protein complement(2464835..2465896) Roseiflexus castenholzii DSM 13941 5539401 YP_001432032.1 CDS Rcas_1924 NC_009767.1 2465902 2466510 R hypothetical protein complement(2465902..2466510) Roseiflexus castenholzii DSM 13941 5539402 YP_001432033.1 CDS Rcas_1925 NC_009767.1 2466814 2467428 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4503 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2466814..2467428 Roseiflexus castenholzii DSM 13941 5539403 YP_001432034.1 CDS Rcas_1926 NC_009767.1 2467425 2467952 D KEGG: ctp42; conserved membrane-spanning protein; hypothetical protein 2467425..2467952 Roseiflexus castenholzii DSM 13941 5539404 YP_001432035.1 CDS Rcas_1927 NC_009767.1 2467949 2468419 D hypothetical protein 2467949..2468419 Roseiflexus castenholzii DSM 13941 5539405 YP_001432036.1 CDS Rcas_1928 NC_009767.1 2468496 2468774 D hypothetical protein 2468496..2468774 Roseiflexus castenholzii DSM 13941 5539406 YP_001432037.1 CDS Rcas_1929 NC_009767.1 2468775 2469623 D KEGG: ctc:pE88_39 hypothetical membrane-spanning protein; hypothetical protein 2468775..2469623 Roseiflexus castenholzii DSM 13941 5539407 YP_001432038.1 CDS Rcas_1931 NC_009767.1 2470645 2472432 D KEGG: rrs:RoseRS_2968 hypothetical protein; hypothetical protein 2470645..2472432 Roseiflexus castenholzii DSM 13941 5539409 YP_001432039.1 CDS Rcas_1932 NC_009767.1 2473023 2474318 D PFAM: glycoside hydrolase family 1; KEGG: rrs:RoseRS_2967 glycoside hydrolase, family 1; glycoside hydrolase family protein 2473023..2474318 Roseiflexus castenholzii DSM 13941 5539410 YP_001432040.1 CDS Rcas_1933 NC_009767.1 2474939 2475676 D PFAM: O-methyltransferase family 3; KEGG: rrs:RoseRS_2965 O-methyltransferase, family 3; O-methyltransferase family protein 2474939..2475676 Roseiflexus castenholzii DSM 13941 5539411 YP_001432041.1 CDS Rcas_1934 NC_009767.1 2475938 2478013 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_2964 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2475938..2478013 Roseiflexus castenholzii DSM 13941 5539412 YP_001432042.1 CDS Rcas_1935 NC_009767.1 2478018 2478248 R hypothetical protein complement(2478018..2478248) Roseiflexus castenholzii DSM 13941 5539413 YP_001432043.1 CDS Rcas_1936 NC_009767.1 2478442 2481084 R PFAM: regulatory protein LuxR; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2963 regulatory protein, LuxR; ATP-dependent transcription regulator LuxR complement(2478442..2481084) Roseiflexus castenholzii DSM 13941 5539414 YP_001432044.1 CDS Rcas_1937 NC_009767.1 2481379 2482188 R PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_2962 rhodanese domain protein; rhodanese domain-containing protein complement(2481379..2482188) Roseiflexus castenholzii DSM 13941 5539415 YP_001432045.1 CDS Rcas_1938 NC_009767.1 2482311 2482976 R hypothetical protein complement(2482311..2482976) Roseiflexus castenholzii DSM 13941 5539416 YP_001432046.1 CDS Rcas_1939 NC_009767.1 2482983 2484110 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0953 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(2482983..2484110) Roseiflexus castenholzii DSM 13941 5539417 YP_001432047.1 CDS Rcas_1940 NC_009767.1 2484444 2484830 R TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: rrs:RoseRS_2960 endoribonuclease L-PSP; endoribonuclease L-PSP complement(2484444..2484830) Roseiflexus castenholzii DSM 13941 5539418 YP_001432048.1 CDS Rcas_1941 NC_009767.1 2484902 2487766 D KEGG: rrs:RoseRS_2959 hypothetical protein; hypothetical protein 2484902..2487766 Roseiflexus castenholzii DSM 13941 5539419 YP_001432049.1 CDS Rcas_1942 NC_009767.1 2487912 2489144 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2958 glycosyl transferase, group 1; group 1 glycosyl transferase 2487912..2489144 Roseiflexus castenholzii DSM 13941 5539420 YP_001432050.1 CDS Rcas_1943 NC_009767.1 2489617 2491797 D KEGG: rrs:RoseRS_2957 membrane protein-like protein; hypothetical protein 2489617..2491797 Roseiflexus castenholzii DSM 13941 5539421 YP_001432051.1 CDS Rcas_1944 NC_009767.1 2492200 2492811 D TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rrs:RoseRS_2955 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2492200..2492811 Roseiflexus castenholzii DSM 13941 5539422 YP_001432052.1 CDS Rcas_1945 NC_009767.1 2493536 2493931 D PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_2953 protein of unknown function DUF86; hypothetical protein 2493536..2493931 Roseiflexus castenholzii DSM 13941 5539423 YP_001432053.1 CDS Rcas_1946 NC_009767.1 2494143 2496530 D PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2952 transketolase, central region; transketolase central region 2494143..2496530 Roseiflexus castenholzii DSM 13941 5539424 YP_001432054.1 CDS Rcas_1947 NC_009767.1 2496659 2497021 R KEGG: rrs:RoseRS_2951 hypothetical protein; hypothetical protein complement(2496659..2497021) Roseiflexus castenholzii DSM 13941 5539425 YP_001432055.1 CDS trpA NC_009767.1 2497155 2497940 D catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2497155..2497940 Roseiflexus castenholzii DSM 13941 5539426 YP_001432056.1 CDS Rcas_1949 NC_009767.1 2498638 2499564 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2949 glycosyl transferase, family 2; glycosyl transferase family protein 2498638..2499564 Roseiflexus castenholzii DSM 13941 5539427 YP_001432057.1 CDS Rcas_1950 NC_009767.1 2499587 2500999 D PFAM: sugar transferase; KEGG: rrs:RoseRS_2948 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 2499587..2500999 Roseiflexus castenholzii DSM 13941 5539428 YP_001432058.1 CDS gatA NC_009767.1 2500999 2502471 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2500999..2502471 Roseiflexus castenholzii DSM 13941 5539429 YP_001432059.1 CDS Rcas_1952 NC_009767.1 2505172 2505885 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2937 protein of unknown function DUF820; hypothetical protein complement(2505172..2505885) Roseiflexus castenholzii DSM 13941 5539430 YP_001432060.1 CDS Rcas_1953 NC_009767.1 2505882 2506607 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2936 protein of unknown function DUF820; hypothetical protein complement(2505882..2506607) Roseiflexus castenholzii DSM 13941 5539431 YP_001432061.1 CDS Rcas_1954 NC_009767.1 2506669 2507103 R KEGG: rrs:RoseRS_2932 hypothetical protein; hypothetical protein complement(2506669..2507103) Roseiflexus castenholzii DSM 13941 5539432 YP_001432062.1 CDS Rcas_1955 NC_009767.1 2507104 2507772 R PFAM: phospholipase/Carboxylesterase; KEGG: rrs:RoseRS_2931 phospholipase/carboxylesterase; phospholipase/carboxylesterase complement(2507104..2507772) Roseiflexus castenholzii DSM 13941 5539433 YP_001432063.1 CDS Rcas_1956 NC_009767.1 2507717 2508196 R KEGG: rrs:RoseRS_2930 hypothetical protein; hypothetical protein complement(2507717..2508196) Roseiflexus castenholzii DSM 13941 5539434 YP_001432064.1 CDS Rcas_1958 NC_009767.1 2508683 2509069 D PFAM: HEPN domain protein; KEGG: gme:Gmet_0217 HEPN; HEPN domain-containing protein 2508683..2509069 Roseiflexus castenholzii DSM 13941 5539436 YP_001432065.1 CDS Rcas_1959 NC_009767.1 2509104 2509727 D KEGG: rrs:RoseRS_2929 hypothetical protein; hypothetical protein 2509104..2509727 Roseiflexus castenholzii DSM 13941 5539437 YP_001432066.1 CDS Rcas_1960 NC_009767.1 2509708 2511285 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2928 drug resistance transporter, EmrB/QacA subfamily; major facilitator transporter complement(2509708..2511285) Roseiflexus castenholzii DSM 13941 5539438 YP_001432067.1 CDS Rcas_1961 NC_009767.1 2511305 2512030 R KEGG: rrs:RoseRS_2927 hypothetical protein; hypothetical protein complement(2511305..2512030) Roseiflexus castenholzii DSM 13941 5539439 YP_001432068.1 CDS Rcas_1962 NC_009767.1 2512057 2512479 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2926 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2512057..2512479) Roseiflexus castenholzii DSM 13941 5539440 YP_001432069.1 CDS Rcas_1963 NC_009767.1 2513045 2514385 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_2925 amine oxidase; amine oxidase 2513045..2514385 Roseiflexus castenholzii DSM 13941 5539441 YP_001432070.1 CDS Rcas_1964 NC_009767.1 2514355 2515380 R PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: rrs:RoseRS_2285 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(2514355..2515380) Roseiflexus castenholzii DSM 13941 5539442 YP_001432071.1 CDS Rcas_1965 NC_009767.1 2515520 2517169 R TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: rrs:RoseRS_2711 YidE/YbjL duplication; hypothetical protein complement(2515520..2517169) Roseiflexus castenholzii DSM 13941 5539443 YP_001432072.1 CDS Rcas_1966 NC_009767.1 2517293 2517472 D KEGG: rrs:RoseRS_2710 hypothetical protein; hypothetical protein 2517293..2517472 Roseiflexus castenholzii DSM 13941 5539444 YP_001432073.1 CDS Rcas_1967 NC_009767.1 2517615 2518040 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_2709 response regulator receiver protein; response regulator receiver protein complement(2517615..2518040) Roseiflexus castenholzii DSM 13941 5539445 YP_001432074.1 CDS Rcas_1968 NC_009767.1 2518158 2519744 D PFAM: Hydantoinase B/oxoprolinase; KEGG: rrs:RoseRS_2708 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase 2518158..2519744 Roseiflexus castenholzii DSM 13941 5539446 YP_001432075.1 CDS Rcas_1969 NC_009767.1 2519824 2521212 R KEGG: rrs:RoseRS_2707 hypothetical protein; hypothetical protein complement(2519824..2521212) Roseiflexus castenholzii DSM 13941 5539447 YP_001432076.1 CDS Rcas_1970 NC_009767.1 2521295 2522137 D PFAM: protein of unknown function DUF422; KEGG: rrs:RoseRS_2706 protein of unknown function DUF422; hypothetical protein 2521295..2522137 Roseiflexus castenholzii DSM 13941 5539448 YP_001432077.1 CDS Rcas_1971 NC_009767.1 2522019 2522876 R PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_2705 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(2522019..2522876) Roseiflexus castenholzii DSM 13941 5539449 YP_001432078.1 CDS Rcas_1972 NC_009767.1 2523207 2525750 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2704 von Willebrand factor, type A; von Willebrand factor A complement(2523207..2525750) Roseiflexus castenholzii DSM 13941 5539450 YP_001432079.1 CDS Rcas_1973 NC_009767.1 2525747 2527591 R TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2703 hypothetical protein; hypothetical protein complement(2525747..2527591) Roseiflexus castenholzii DSM 13941 5539451 YP_001432080.1 CDS Rcas_1974 NC_009767.1 2527595 2528518 R KEGG: rrs:RoseRS_2702 hypothetical protein; hypothetical protein complement(2527595..2528518) Roseiflexus castenholzii DSM 13941 5539452 YP_001432081.1 CDS Rcas_1975 NC_009767.1 2528490 2529902 R KEGG: rrs:RoseRS_2701 hypothetical protein; hypothetical protein complement(2528490..2529902) Roseiflexus castenholzii DSM 13941 5539453 YP_001432082.1 CDS Rcas_1976 NC_009767.1 2529902 2531317 R KEGG: rrs:RoseRS_2700 hypothetical protein; hypothetical protein complement(2529902..2531317) Roseiflexus castenholzii DSM 13941 5539454 YP_001432083.1 CDS Rcas_1977 NC_009767.1 2532265 2534517 D TIGRFAM: CRISPR-associated protein, Csm1 family; KEGG: csc:Csac_0075 CRISPR-associated protein, Csm1 family; CRISPR-associated Csm1 family protein 2532265..2534517 Roseiflexus castenholzii DSM 13941 5539455 YP_001432084.1 CDS Rcas_1978 NC_009767.1 2534514 2534996 D TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: chy:CHY_2143 CRISPR-associated protein, Csm2 family; CRISPR-associated Csm2 family protein 2534514..2534996 Roseiflexus castenholzii DSM 13941 5539456 YP_001432085.1 CDS Rcas_1979 NC_009767.1 2535012 2535848 D TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: tpt:Tpet_1095 CRISPR-associated RAMP protein, Csm3 family; CRISPR-associated RAMP Csm3 family protein 2535012..2535848 Roseiflexus castenholzii DSM 13941 5539457 YP_001432086.1 CDS Rcas_1980 NC_009767.1 2535861 2537003 D TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; KEGG: chy:CHY_2141 CRISPR-associated RAMP protein, Csm4 family; CRISPR-associated RAMP Csm4 family protein 2535861..2537003 Roseiflexus castenholzii DSM 13941 5539458 YP_001432087.1 CDS Rcas_1981 NC_009767.1 2537003 2538433 D TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; KEGG: ptr:743860 hypothetical protein LOC743860; CRISPR-associated RAMP Csm5 family protein 2537003..2538433 Roseiflexus castenholzii DSM 13941 5539459 YP_001432088.1 CDS Rcas_1982 NC_009767.1 2538727 2540193 D KEGG: mka:MK1318 hypothetical protein; hypothetical protein 2538727..2540193 Roseiflexus castenholzii DSM 13941 5539460 YP_001432089.1 CDS Rcas_1983 NC_009767.1 2541533 2542396 D KEGG: cya:CYA_0883 CRISPR-associated protein Cas6; hypothetical protein 2541533..2542396 Roseiflexus castenholzii DSM 13941 5539461 YP_001432090.1 CDS Rcas_1984 NC_009767.1 2542652 2543671 D TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: drm:Dred_1625 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 2542652..2543671 Roseiflexus castenholzii DSM 13941 5539462 YP_001432091.1 CDS Rcas_1985 NC_009767.1 2543682 2543963 D TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: tth:TT_P0101 hypothetical protein; CRISPR-associated Cas2 family protein 2543682..2543963 Roseiflexus castenholzii DSM 13941 5539463 YP_001432092.1 CDS Rcas_1986 NC_009767.1 2549978 2551408 D hypothetical protein 2549978..2551408 Roseiflexus castenholzii DSM 13941 5539464 YP_001432093.1 CDS Rcas_1987 NC_009767.1 2552108 2552740 D KEGG: rrs:RoseRS_1721 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 2552108..2552740 Roseiflexus castenholzii DSM 13941 5539465 YP_001432094.1 CDS Rcas_1988 NC_009767.1 2552774 2553898 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1720 glycosyl transferase, group 1; group 1 glycosyl transferase 2552774..2553898 Roseiflexus castenholzii DSM 13941 5539466 YP_001432095.1 CDS Rcas_1989 NC_009767.1 2554213 2554500 D hypothetical protein 2554213..2554500 Roseiflexus castenholzii DSM 13941 5539467 YP_001432096.1 CDS Rcas_1990 NC_009767.1 2554644 2555816 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_1719 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2554644..2555816 Roseiflexus castenholzii DSM 13941 5539468 YP_001432097.1 CDS Rcas_1991 NC_009767.1 2555979 2557322 D KEGG: cya:CYA_1695 hypothetical protein; hypothetical protein 2555979..2557322 Roseiflexus castenholzii DSM 13941 5539469 YP_001432098.1 CDS Rcas_1992 NC_009767.1 2557326 2558177 D KEGG: rrs:RoseRS_0853 membrane protein-like protein; hypothetical protein 2557326..2558177 Roseiflexus castenholzii DSM 13941 5539470 YP_001432099.1 CDS Rcas_1993 NC_009767.1 2558261 2558686 D KEGG: rrs:RoseRS_1717 hypothetical protein; hypothetical protein 2558261..2558686 Roseiflexus castenholzii DSM 13941 5539471 YP_001432100.1 CDS Rcas_1994 NC_009767.1 2559648 2561591 D PFAM: protein of unknown function DUF839; KEGG: rrs:RoseRS_1716 protein of unknown function DUF839; hypothetical protein 2559648..2561591 Roseiflexus castenholzii DSM 13941 5539472 YP_001432101.1 CDS Rcas_1995 NC_009767.1 2561676 2562182 R PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: rrs:RoseRS_1715 HNH endonuclease; HNH endonuclease complement(2561676..2562182) Roseiflexus castenholzii DSM 13941 5539473 YP_001432102.1 CDS Rcas_1996 NC_009767.1 2562894 2564477 D TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rrs:RoseRS_1714 cell envelope-related transcriptional attenuator; cell envelope-like transcriptional attenuator 2562894..2564477 Roseiflexus castenholzii DSM 13941 5539474 YP_001432103.1 CDS Rcas_1997 NC_009767.1 2564488 2565153 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1713 protein of unknown function DUF820; hypothetical protein 2564488..2565153 Roseiflexus castenholzii DSM 13941 5539475 YP_001432104.1 CDS Rcas_1998 NC_009767.1 2565164 2566609 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1712 alpha amylase, catalytic region; alpha amylase 2565164..2566609 Roseiflexus castenholzii DSM 13941 5539476 YP_001432105.1 CDS Rcas_1999 NC_009767.1 2566606 2567295 D KEGG: rrs:RoseRS_1711 hypothetical protein; hypothetical protein 2566606..2567295 Roseiflexus castenholzii DSM 13941 5539477 YP_001432106.1 CDS Rcas_2000 NC_009767.1 2567786 2568751 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_1710 anti-sigma-factor antagonist; anti-sigma-factor antagonist 2567786..2568751 Roseiflexus castenholzii DSM 13941 5539478 YP_001432107.1 CDS rplU NC_009767.1 2570928 2571290 D PFAM: ribosomal protein L21; KEGG: rrs:RoseRS_2695 ribosomal protein L21; 50S ribosomal protein L21 2570928..2571290 Roseiflexus castenholzii DSM 13941 5539479 YP_001432108.1 CDS rpmA NC_009767.1 2571280 2571537 D involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 2571280..2571537 Roseiflexus castenholzii DSM 13941 5539480 YP_001432109.1 CDS Rcas_2003 NC_009767.1 2571548 2571850 D PFAM: ribosomal protein L31; KEGG: rrs:RoseRS_2697 ribosomal protein L31; 50S ribosomal protein L31 2571548..2571850 Roseiflexus castenholzii DSM 13941 5539481 YP_001432110.1 CDS Rcas_2004 NC_009767.1 2571914 2572879 R PFAM: Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_2698 helix-turn-helix, type 11 domain protein; helix-turn-helix type 11 domain-containing protein complement(2571914..2572879) Roseiflexus castenholzii DSM 13941 5539482 YP_001432111.1 CDS Rcas_2005 NC_009767.1 2572895 2573335 R KEGG: rrs:RoseRS_2699 hypothetical protein; hypothetical protein complement(2572895..2573335) Roseiflexus castenholzii DSM 13941 5539483 YP_001432112.1 CDS Rcas_2006 NC_009767.1 2573564 2574817 D PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rrs:RoseRS_1722 Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase 2573564..2574817 Roseiflexus castenholzii DSM 13941 5539484 YP_001432113.1 CDS Rcas_2007 NC_009767.1 2574824 2575198 D PFAM: protein of unknown function UPF0102; KEGG: rrs:RoseRS_1723 protein of unknown function UPF0102; hypothetical protein 2574824..2575198 Roseiflexus castenholzii DSM 13941 5539485 YP_001432114.1 CDS Rcas_2008 NC_009767.1 2575236 2575796 D PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_1724 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 2575236..2575796 Roseiflexus castenholzii DSM 13941 5539486 YP_001432115.1 CDS Rcas_2009 NC_009767.1 2575835 2576266 D PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_1725 signal-transduction protein with CBS domains; hypothetical protein 2575835..2576266 Roseiflexus castenholzii DSM 13941 5539487 YP_001432116.1 CDS Rcas_2010 NC_009767.1 2576295 2577407 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0375 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 2576295..2577407 Roseiflexus castenholzii DSM 13941 5539488 YP_001432117.1 CDS Rcas_2011 NC_009767.1 2577544 2578908 R PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1726 dihydrolipoyllysine-residue succinyltransferase; dihydrolipoyllysine-residue succinyltransferase complement(2577544..2578908) Roseiflexus castenholzii DSM 13941 5539489 YP_001432118.1 CDS Rcas_2012 NC_009767.1 2578920 2579888 R PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_1727 transketolase, central region; transketolase central region complement(2578920..2579888) Roseiflexus castenholzii DSM 13941 5539490 YP_001432119.1 CDS Rcas_2013 NC_009767.1 2579892 2580953 R PFAM: dehydrogenase E1 component; KEGG: rrs:RoseRS_1728 pyruvate dehydrogenase (acetyl-transferring); pyruvate dehydrogenase complement(2579892..2580953) Roseiflexus castenholzii DSM 13941 5539491 YP_001432120.1 CDS Rcas_2014 NC_009767.1 2581340 2582257 R KEGG: rrs:RoseRS_1729 hypothetical protein; hypothetical protein complement(2581340..2582257) Roseiflexus castenholzii DSM 13941 5539492 YP_001432121.1 CDS Rcas_2015 NC_009767.1 2582455 2583690 D PFAM: RNA binding S1 domain protein; KEGG: rrs:RoseRS_1730 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 2582455..2583690 Roseiflexus castenholzii DSM 13941 5539493 YP_001432122.1 CDS Rcas_2016 NC_009767.1 2583779 2586322 D PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1731 ATPase AAA-2 domain protein; ATPase 2583779..2586322 Roseiflexus castenholzii DSM 13941 5539494 YP_001432123.1 CDS Rcas_2017 NC_009767.1 2586585 2587979 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2586585..2587979 Roseiflexus castenholzii DSM 13941 5539495 YP_001432124.1 CDS Rcas_2018 NC_009767.1 2587963 2589057 D PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: rrs:RoseRS_1733 PilT protein domain protein; twitching motility protein PilT 2587963..2589057 Roseiflexus castenholzii DSM 13941 5539496 YP_001432125.1 CDS Rcas_2019 NC_009767.1 2589471 2590868 D PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_1738 aminotransferase class-III; class III aminotransferase 2589471..2590868 Roseiflexus castenholzii DSM 13941 5539497 YP_001432126.1 CDS Rcas_2020 NC_009767.1 2590872 2591375 R KEGG: rrs:RoseRS_1739 hypothetical protein; hypothetical protein complement(2590872..2591375) Roseiflexus castenholzii DSM 13941 5539498 YP_001432127.1 CDS Rcas_2021 NC_009767.1 2591656 2593830 D PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1740 glycoside hydrolase family 2, sugar binding; glycoside hydrolase family protein 2591656..2593830 Roseiflexus castenholzii DSM 13941 5539499 YP_001432128.1 CDS Rcas_2022 NC_009767.1 2593844 2595034 D KEGG: rrs:RoseRS_1741 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2593844..2595034 Roseiflexus castenholzii DSM 13941 5539500 YP_001432129.1 CDS Rcas_2023 NC_009767.1 2595280 2595861 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_1742 intracellular protease, PfpI family; PfpI family intracellular peptidase complement(2595280..2595861) Roseiflexus castenholzii DSM 13941 5539501 YP_001432130.1 CDS Rcas_2024 NC_009767.1 2596402 2597874 D KEGG: rrs:RoseRS_1744 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; protoporphyrinogen oxidase 2596402..2597874 Roseiflexus castenholzii DSM 13941 5539502 YP_001432131.1 CDS Rcas_2025 NC_009767.1 2597924 2598544 D TIGRFAM: DNA binding domain, excisionase family; PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_1745 DNA binding domain, excisionase family; DNA binding domain-containing protein 2597924..2598544 Roseiflexus castenholzii DSM 13941 5539503 YP_001432132.1 CDS hemA NC_009767.1 2598556 2599833 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2598556..2599833 Roseiflexus castenholzii DSM 13941 5539504 YP_001432133.1 CDS Rcas_2027 NC_009767.1 2599862 2600563 D PFAM: Chlorite dismutase; KEGG: rrs:RoseRS_1747 chlorite dismutase; chlorite dismutase 2599862..2600563 Roseiflexus castenholzii DSM 13941 5539505 YP_001432134.1 CDS Rcas_2028 NC_009767.1 2600567 2601625 D KEGG: rrs:RoseRS_1748 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase 2600567..2601625 Roseiflexus castenholzii DSM 13941 5539506 YP_001432135.1 CDS Rcas_2029 NC_009767.1 2601618 2602559 D PFAM: ferrochelatase; KEGG: rrs:RoseRS_1749 ferrochelatase; ferrochelatase 2601618..2602559 Roseiflexus castenholzii DSM 13941 5539507 YP_001432136.1 CDS hemC NC_009767.1 2602556 2603467 D transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2602556..2603467 Roseiflexus castenholzii DSM 13941 5539508 YP_001432137.1 CDS Rcas_2031 NC_009767.1 2603472 2604281 D PFAM: Uroporphyrinogen III synthase HEM4; KEGG: rrs:RoseRS_1751 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 2603472..2604281 Roseiflexus castenholzii DSM 13941 5539509 YP_001432138.1 CDS Rcas_2032 NC_009767.1 2604866 2605849 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2604866..2605849 Roseiflexus castenholzii DSM 13941 5539510 YP_001432139.1 CDS Rcas_2033 NC_009767.1 2606015 2607319 D Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2606015..2607319 Roseiflexus castenholzii DSM 13941 5539511 YP_001432140.1 CDS Rcas_2034 NC_009767.1 2607419 2608534 D KEGG: rrs:RoseRS_1755 hypothetical protein; hypothetical protein 2607419..2608534 Roseiflexus castenholzii DSM 13941 5539512 YP_001432141.1 CDS Rcas_2035 NC_009767.1 2609200 2610036 D PFAM: protein of unknown function DUF574; KEGG: rrs:RoseRS_1762 protein of unknown function DUF574; hypothetical protein 2609200..2610036 Roseiflexus castenholzii DSM 13941 5539513 YP_001432142.1 CDS Rcas_2036 NC_009767.1 2610130 2610804 D KEGG: rrs:RoseRS_1763 hypothetical protein; hypothetical protein 2610130..2610804 Roseiflexus castenholzii DSM 13941 5539514 YP_001432143.1 CDS Rcas_2037 NC_009767.1 2610863 2611804 R KEGG: rrs:RoseRS_1761 transmembrane anti-sigma factor; transmembrane anti-sigma factor complement(2610863..2611804) Roseiflexus castenholzii DSM 13941 5539515 YP_001432144.1 CDS Rcas_2038 NC_009767.1 2611821 2612438 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1760 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(2611821..2612438) Roseiflexus castenholzii DSM 13941 5539516 YP_001432145.1 CDS Rcas_2039 NC_009767.1 2612614 2613762 R KEGG: rrs:RoseRS_1759 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; homoserine O-acetyltransferase complement(2612614..2613762) Roseiflexus castenholzii DSM 13941 5539517 YP_001432146.1 CDS Rcas_2040 NC_009767.1 2613951 2615237 R KEGG: rrs:RoseRS_1758 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase complement(2613951..2615237) Roseiflexus castenholzii DSM 13941 5539518 YP_001432147.1 CDS Rcas_2041 NC_009767.1 2615887 2616255 D KEGG: rrs:RoseRS_1757 hypothetical protein; hypothetical protein 2615887..2616255 Roseiflexus castenholzii DSM 13941 5539519 YP_001432148.1 CDS Rcas_2042 NC_009767.1 2616865 2618889 D KEGG: yen:YE0550 glycerol metabolism operon regulatory protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family GAF modulated sigma54 specific transcriptional regulator 2616865..2618889 Roseiflexus castenholzii DSM 13941 5539520 YP_001432149.1 CDS Rcas_2043 NC_009767.1 2619351 2620073 D TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: rrs:RoseRS_1765 MIP family channel protein; MIP family channel protein 2619351..2620073 Roseiflexus castenholzii DSM 13941 5539521 YP_001432150.1 CDS Rcas_2044 NC_009767.1 2620209 2621210 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 2620209..2621210 Roseiflexus castenholzii DSM 13941 5539522 YP_001432151.1 CDS Rcas_2045 NC_009767.1 2621214 2621846 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rrs:RoseRS_1767 dihydroxyacetone kinase, L subunit; dihydroxyacetone kinase subunit L 2621214..2621846 Roseiflexus castenholzii DSM 13941 5539523 YP_001432152.1 CDS Rcas_2047 NC_009767.1 2623529 2624086 D SMART: ribosomal RNA adenine methylase transferase; KEGG: rrs:RoseRS_1769 hypothetical protein; ribosomal RNA adenine methylase transferase 2623529..2624086 Roseiflexus castenholzii DSM 13941 5539525 YP_001432153.1 CDS Rcas_2048 NC_009767.1 2624253 2626769 D TIGRFAM: phosphocarrier, HPr family; phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; PFAM: phosphocarrier HPr protein; PEP-utilizing protein; PTS system fructose subfamily IIA component; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rrs:RoseRS_1770 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2624253..2626769 Roseiflexus castenholzii DSM 13941 5539526 YP_001432154.1 CDS Rcas_2049 NC_009767.1 2627211 2627627 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rrs:RoseRS_1771 single-strand binding protein; single-strand binding protein complement(2627211..2627627) Roseiflexus castenholzii DSM 13941 5539527 YP_001432155.1 CDS Rcas_2050 NC_009767.1 2628970 2629662 R KEGG: rrs:RoseRS_1772 hypothetical protein; hypothetical protein complement(2628970..2629662) Roseiflexus castenholzii DSM 13941 5539528 YP_001432156.1 CDS Rcas_2051 NC_009767.1 2630057 2630659 R PFAM: Disulphide bond formation protein DsbB; KEGG: rrs:RoseRS_1773 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB complement(2630057..2630659) Roseiflexus castenholzii DSM 13941 5539531 YP_001432157.1 CDS Rcas_2052 NC_009767.1 2630784 2631401 D KEGG: rrs:RoseRS_1774 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 2630784..2631401 Roseiflexus castenholzii DSM 13941 5539532 YP_001432158.1 CDS Rcas_2053 NC_009767.1 2633454 2634896 R KEGG: rrs:RoseRS_1775 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(2633454..2634896) Roseiflexus castenholzii DSM 13941 5539533 YP_001432159.1 CDS Rcas_2054 NC_009767.1 2634950 2635561 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_3553 protein of unknown function DUF820; hypothetical protein complement(2634950..2635561) Roseiflexus castenholzii DSM 13941 5539534 YP_001432160.1 CDS Rcas_2055 NC_009767.1 2635606 2637795 R PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_1099 glycosyl transferase, family 39; glycosyl transferase family protein complement(2635606..2637795) Roseiflexus castenholzii DSM 13941 5539535 YP_001432161.1 CDS Rcas_2056 NC_009767.1 2637866 2638648 R KEGG: rrs:RoseRS_1776 hypothetical protein; hypothetical protein complement(2637866..2638648) Roseiflexus castenholzii DSM 13941 5539536 YP_001432162.1 CDS Rcas_2057 NC_009767.1 2638658 2639353 R PFAM: ribulose-phosphate 3-epimerase; KEGG: rrs:RoseRS_1777 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2638658..2639353) Roseiflexus castenholzii DSM 13941 5539537 YP_001432163.1 CDS Rcas_2058 NC_009767.1 2639603 2641018 D PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1778 major facilitator superfamily MFS_1; major facilitator transporter 2639603..2641018 Roseiflexus castenholzii DSM 13941 5539538 YP_001432164.1 CDS Rcas_2059 NC_009767.1 2641145 2641612 D KEGG: rrs:RoseRS_1779 hypothetical protein; hypothetical protein 2641145..2641612 Roseiflexus castenholzii DSM 13941 5539539 YP_001432165.1 CDS Rcas_2060 NC_009767.1 2641626 2642090 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1780 FHA domain containing protein; FHA domain-containing protein complement(2641626..2642090) Roseiflexus castenholzii DSM 13941 5539540 YP_001432166.1 CDS Rcas_2061 NC_009767.1 2642131 2642859 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1781 FHA domain containing protein; FHA domain-containing protein complement(2642131..2642859) Roseiflexus castenholzii DSM 13941 5539541 YP_001432167.1 CDS Rcas_2062 NC_009767.1 2643071 2644015 R KEGG: rrs:RoseRS_1782 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein complement(2643071..2644015) Roseiflexus castenholzii DSM 13941 5539542 YP_001432168.1 CDS Rcas_2064 NC_009767.1 2647342 2648334 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(2647342..2648334) Roseiflexus castenholzii DSM 13941 5539544 YP_001432169.1 CDS Rcas_2065 NC_009767.1 2648567 2649955 D PFAM: alpha/beta hydrolase fold; cyclic nucleotide-binding; KEGG: rrs:RoseRS_1786 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2648567..2649955 Roseiflexus castenholzii DSM 13941 5539545 YP_001432170.1 CDS Rcas_2066 NC_009767.1 2652305 2653483 D PFAM: peptidase M24; KEGG: rrs:RoseRS_1789 peptidase M24; peptidase M24 2652305..2653483 Roseiflexus castenholzii DSM 13941 5539546 YP_001432171.1 CDS Rcas_2067 NC_009767.1 2653459 2654313 R KEGG: rrs:RoseRS_1470 hypothetical protein; hypothetical protein complement(2653459..2654313) Roseiflexus castenholzii DSM 13941 5539547 YP_001432172.1 CDS Rcas_2068 NC_009767.1 2654324 2654902 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1471 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(2654324..2654902) Roseiflexus castenholzii DSM 13941 5539548 YP_001432173.1 CDS Rcas_2069 NC_009767.1 2655074 2655367 D KEGG: rrs:RoseRS_1472 hypothetical protein; hypothetical protein 2655074..2655367 Roseiflexus castenholzii DSM 13941 5539549 YP_001432174.1 CDS pgk NC_009767.1 2655583 2656770 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(2655583..2656770) Roseiflexus castenholzii DSM 13941 5539550 YP_001432175.1 CDS Rcas_2071 NC_009767.1 2656920 2657639 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1481 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2656920..2657639 Roseiflexus castenholzii DSM 13941 5539551 YP_001432176.1 CDS Rcas_2072 NC_009767.1 2657757 2658893 R KEGG: rrs:RoseRS_1482 hypothetical protein; hypothetical protein complement(2657757..2658893) Roseiflexus castenholzii DSM 13941 5539552 YP_001432177.1 CDS Rcas_2073 NC_009767.1 2659221 2660147 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rrs:RoseRS_1483 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2659221..2660147 Roseiflexus castenholzii DSM 13941 5539553 YP_001432178.1 CDS Rcas_2074 NC_009767.1 2660284 2661723 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mva:Mvan_4388 amine oxidase; amine oxidase complement(2660284..2661723) Roseiflexus castenholzii DSM 13941 5539554 YP_001432179.1 CDS Rcas_2075 NC_009767.1 2661814 2662782 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_1484 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(2661814..2662782) Roseiflexus castenholzii DSM 13941 5539555 YP_001432180.1 CDS Rcas_2076 NC_009767.1 2662818 2663960 R KEGG: mma:MM3038 transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; IS605 family transposase OrfB complement(2662818..2663960) Roseiflexus castenholzii DSM 13941 5539556 YP_001432181.1 CDS Rcas_2077 NC_009767.1 2664273 2667968 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1485 alpha amylase, catalytic region; alpha amylase complement(2664273..2667968) Roseiflexus castenholzii DSM 13941 5539557 YP_001432182.1 CDS Rcas_2078 NC_009767.1 2668352 2669107 D KEGG: rrs:RoseRS_1487 hypothetical protein; hypothetical protein 2668352..2669107 Roseiflexus castenholzii DSM 13941 5539558 YP_001432183.1 CDS Rcas_2079 NC_009767.1 2669224 2670246 D PFAM: Rhodanese domain protein; KEGG: rrs:RoseRS_1488 rhodanese domain protein; rhodanese domain-containing protein 2669224..2670246 Roseiflexus castenholzii DSM 13941 5539559 YP_001432184.1 CDS Rcas_2080 NC_009767.1 2670253 2671491 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rrs:RoseRS_1489 protein of unknown function DUF395, YeeE/YedE; hypothetical protein 2670253..2671491 Roseiflexus castenholzii DSM 13941 5539560 YP_001432185.1 CDS Rcas_2081 NC_009767.1 2671737 2672420 D KEGG: rrs:RoseRS_2458 hypothetical protein; hypothetical protein 2671737..2672420 Roseiflexus castenholzii DSM 13941 5539561 YP_001432186.1 CDS Rcas_2082 NC_009767.1 2672454 2673995 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rrs:RoseRS_1490 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2672454..2673995) Roseiflexus castenholzii DSM 13941 5539562 YP_001432187.1 CDS Rcas_2083 NC_009767.1 2674060 2675271 R KEGG: rrs:RoseRS_1491 hypothetical protein; hypothetical protein complement(2674060..2675271) Roseiflexus castenholzii DSM 13941 5539563 YP_001432188.1 CDS Rcas_2084 NC_009767.1 2675864 2676766 D TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_1492 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 2675864..2676766 Roseiflexus castenholzii DSM 13941 5539564 YP_001432189.1 CDS Rcas_2085 NC_009767.1 2676800 2678290 R hypothetical protein complement(2676800..2678290) Roseiflexus castenholzii DSM 13941 5539565 YP_001432190.1 CDS Rcas_2086 NC_009767.1 2678796 2679863 R PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_2987 homoserine dehydrogenase; homoserine dehydrogenase complement(2678796..2679863) Roseiflexus castenholzii DSM 13941 5539566 YP_001432191.1 CDS Rcas_2087 NC_009767.1 2680059 2680622 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2988 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2680059..2680622 Roseiflexus castenholzii DSM 13941 5539567 YP_001432192.1 CDS Rcas_2088 NC_009767.1 2681114 2681470 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: rrs:RoseRS_2989 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 2681114..2681470 Roseiflexus castenholzii DSM 13941 5539568 YP_001432193.1 CDS Rcas_2089 NC_009767.1 2681937 2682743 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2681937..2682743 Roseiflexus castenholzii DSM 13941 5539569 YP_001432194.1 CDS Rcas_2090 NC_009767.1 2682721 2683290 D PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: rrs:RoseRS_2991 NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase (ubiquinone) 30 kDa subunit 2682721..2683290 Roseiflexus castenholzii DSM 13941 5539570 YP_001432195.1 CDS Rcas_2091 NC_009767.1 2683311 2684435 D PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: rrs:RoseRS_2992 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2683311..2684435 Roseiflexus castenholzii DSM 13941 5539571 YP_001432196.1 CDS Rcas_2092 NC_009767.1 2684598 2685947 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2993 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2684598..2685947 Roseiflexus castenholzii DSM 13941 5539572 YP_001432197.1 CDS Rcas_2093 NC_009767.1 2685962 2687320 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rrs:RoseRS_2994 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 2685962..2687320 Roseiflexus castenholzii DSM 13941 5539573 YP_001432198.1 CDS Rcas_2094 NC_009767.1 2687348 2688001 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rrs:RoseRS_2995 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 2687348..2688001 Roseiflexus castenholzii DSM 13941 5539574 YP_001432199.1 CDS Rcas_2095 NC_009767.1 2688056 2688382 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2996 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L 2688056..2688382 Roseiflexus castenholzii DSM 13941 5539575 YP_001432200.1 CDS Rcas_2096 NC_009767.1 2689201 2691381 D KEGG: rrs:RoseRS_2997 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L 2689201..2691381 Roseiflexus castenholzii DSM 13941 5539576 YP_001432201.1 CDS Rcas_2097 NC_009767.1 2691768 2693468 D KEGG: rrs:RoseRS_2998 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2691768..2693468 Roseiflexus castenholzii DSM 13941 5539577 YP_001432202.1 CDS Rcas_2098 NC_009767.1 2693476 2694993 D KEGG: rrs:RoseRS_2999 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 2693476..2694993 Roseiflexus castenholzii DSM 13941 5539578 YP_001432203.1 CDS Rcas_2099 NC_009767.1 2695720 2697342 D KEGG: rrs:RoseRS_3000 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N 2695720..2697342 Roseiflexus castenholzii DSM 13941 5539579 YP_001432204.1 CDS Rcas_2100 NC_009767.1 2697461 2698024 D KEGG: rrs:RoseRS_3001 hypothetical protein; hypothetical protein 2697461..2698024 Roseiflexus castenholzii DSM 13941 5539580 YP_001432205.1 CDS Rcas_2101 NC_009767.1 2698472 2700412 D KEGG: rrs:RoseRS_3002 hypothetical protein; hypothetical protein 2698472..2700412 Roseiflexus castenholzii DSM 13941 5539581 YP_001432206.1 CDS Rcas_2103 NC_009767.1 2701415 2702209 D PFAM: Abortive infection protein; KEGG: mth:MTH623 hypothetical protein; abortive infection protein 2701415..2702209 Roseiflexus castenholzii DSM 13941 5539583 YP_001432207.1 CDS Rcas_2104 NC_009767.1 2702634 2704049 D TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3003 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2702634..2704049 Roseiflexus castenholzii DSM 13941 5539584 YP_001432208.1 CDS Rcas_2105 NC_009767.1 2704068 2704433 D KEGG: rrs:RoseRS_3004 hypothetical protein; hypothetical protein 2704068..2704433 Roseiflexus castenholzii DSM 13941 5539585 YP_001432209.1 CDS Rcas_2106 NC_009767.1 2705393 2706028 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_3005 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(2705393..2706028) Roseiflexus castenholzii DSM 13941 5539586 YP_001432210.1 CDS Rcas_2107 NC_009767.1 2706219 2708639 R PFAM: peptidase S16 lon domain protein; KEGG: rrs:RoseRS_3006 ATP-dependent protease-like protein; peptidase S16 lon domain-containing protein complement(2706219..2708639) Roseiflexus castenholzii DSM 13941 5539587 YP_001432211.1 CDS Rcas_2108 NC_009767.1 2708694 2709644 R TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_3007 agmatinase; agmatinase complement(2708694..2709644) Roseiflexus castenholzii DSM 13941 5539588 YP_001432212.1 CDS Rcas_2109 NC_009767.1 2709889 2710446 D KEGG: rrs:RoseRS_3051 hypothetical protein; hypothetical protein 2709889..2710446 Roseiflexus castenholzii DSM 13941 5539589 YP_001432213.1 CDS Rcas_2110 NC_009767.1 2710683 2712890 D PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_3050 extracellular solute-binding protein, family 5; extracellular solute-binding protein 2710683..2712890 Roseiflexus castenholzii DSM 13941 5539590 YP_001432214.1 CDS Rcas_2111 NC_009767.1 2712985 2713971 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3049 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2712985..2713971 Roseiflexus castenholzii DSM 13941 5539591 YP_001432215.1 CDS Rcas_2112 NC_009767.1 2713991 2715121 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_3048 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2713991..2715121 Roseiflexus castenholzii DSM 13941 5539592 YP_001432216.1 CDS Rcas_2113 NC_009767.1 2715191 2716186 D KEGG: rrs:RoseRS_3047 hypothetical protein; hypothetical protein 2715191..2716186 Roseiflexus castenholzii DSM 13941 5539593 YP_001432217.1 CDS Rcas_2114 NC_009767.1 2716338 2717852 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_L_2591 D-ribose transport system ATP-binding protein; ABC transporter-like protein complement(2716338..2717852) Roseiflexus castenholzii DSM 13941 5539594 YP_001432218.1 CDS Rcas_2115 NC_009767.1 2717916 2719010 R KEGG: mes:Meso_1605 sugar ABC transporter, periplasmic sugar-binding protein; sugar ABC transporter periplasmic sugar-binding protein complement(2717916..2719010) Roseiflexus castenholzii DSM 13941 5539595 YP_001432219.1 CDS Rcas_2116 NC_009767.1 2719087 2720109 R PFAM: inner-membrane translocator; KEGG: mes:Meso_1606 inner-membrane translocator; monosaccharide-transporting ATPase complement(2719087..2720109) Roseiflexus castenholzii DSM 13941 5539596 YP_001432220.1 CDS Rcas_2117 NC_009767.1 2720149 2721390 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sen:SACE_3937 mandelate racemase/muconate lactonizing enzyme; mandelate racemase/muconate lactonizing protein complement(2720149..2721390) Roseiflexus castenholzii DSM 13941 5539597 YP_001432221.1 CDS Rcas_2118 NC_009767.1 2721415 2722197 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:pRL110166 cyclohexadiene dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2721415..2722197) Roseiflexus castenholzii DSM 13941 5539598 YP_001432222.1 CDS Rcas_2119 NC_009767.1 2722187 2723335 R PFAM: extracellular solute-binding protein family 1; KEGG: rxy:Rxyl_3005 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(2722187..2723335) Roseiflexus castenholzii DSM 13941 5539599 YP_001432223.1 CDS Rcas_2120 NC_009767.1 2723332 2724054 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: aau:AAur_1100 transcription regulator, GntR family; GntR family transcriptional regulator complement(2723332..2724054) Roseiflexus castenholzii DSM 13941 5539600 YP_001432224.1 CDS Rcas_2121 NC_009767.1 2725043 2726044 D KEGG: rrs:RoseRS_3491 response regulator receiver and SARP domain protein; response regulator receiver/SARP domain-containing protein 2725043..2726044 Roseiflexus castenholzii DSM 13941 5539601 YP_001432225.1 CDS Rcas_2122 NC_009767.1 2726262 2726963 D KEGG: rrs:RoseRS_3492 hypothetical protein; hypothetical protein 2726262..2726963 Roseiflexus castenholzii DSM 13941 5539602 YP_001432226.1 CDS Rcas_2123 NC_009767.1 2727034 2727315 D PFAM: protein of unknown function DUF909; KEGG: rrs:RoseRS_3493 protein of unknown function DUF909; hypothetical protein 2727034..2727315 Roseiflexus castenholzii DSM 13941 5539603 YP_001432227.1 CDS Rcas_2124 NC_009767.1 2727349 2732088 D PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: rrs:RoseRS_3495 cell divisionFtsK/SpoIIIE; cell division protein FtsK 2727349..2732088 Roseiflexus castenholzii DSM 13941 5539604 YP_001432228.1 CDS Rcas_2125 NC_009767.1 2732085 2732933 D PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_3496 FHA domain containing protein; FHA domain-containing protein 2732085..2732933 Roseiflexus castenholzii DSM 13941 5539605 YP_001432229.1 CDS Rcas_2126 NC_009767.1 2732930 2734156 D KEGG: rrs:RoseRS_3497 von Willebrand factor, type A; von Willebrand factor, type A 2732930..2734156 Roseiflexus castenholzii DSM 13941 5539606 YP_001432230.1 CDS Rcas_2127 NC_009767.1 2734166 2735203 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3498 protein kinase; serine/threonine protein kinase 2734166..2735203 Roseiflexus castenholzii DSM 13941 5539607 YP_001432231.1 CDS Rcas_2128 NC_009767.1 2735434 2737509 D PFAM: PASTA domain containing protein; Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_3499 PASTA domain containing protein; Ser/Thr phosphatase 2735434..2737509 Roseiflexus castenholzii DSM 13941 5539608 YP_001432232.1 CDS Rcas_2129 NC_009767.1 2737629 2739041 D KEGG: rrs:RoseRS_3500 hypothetical protein; hypothetical protein 2737629..2739041 Roseiflexus castenholzii DSM 13941 5539609 YP_001432233.1 CDS Rcas_2130 NC_009767.1 2739152 2740018 D PFAM: CHAP domain containing protein; KEGG: rrs:RoseRS_3502 CHAP domain containing protein; CHAP domain-containing protein 2739152..2740018 Roseiflexus castenholzii DSM 13941 5539610 YP_001432234.1 CDS Rcas_2131 NC_009767.1 2740405 2741562 D KEGG: rrs:RoseRS_3501 hypothetical protein; hypothetical protein 2740405..2741562 Roseiflexus castenholzii DSM 13941 5539611 YP_001432235.1 CDS Rcas_2132 NC_009767.1 2741682 2742518 D hypothetical protein 2741682..2742518 Roseiflexus castenholzii DSM 13941 5539612 YP_001432236.1 CDS Rcas_2133 NC_009767.1 2742916 2744046 D KEGG: rrs:RoseRS_3044 hypothetical protein; hypothetical protein 2742916..2744046 Roseiflexus castenholzii DSM 13941 5539613 YP_001432237.1 CDS Rcas_2134 NC_009767.1 2744052 2744921 D PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: rrs:RoseRS_3043 D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase 2744052..2744921 Roseiflexus castenholzii DSM 13941 5539614 YP_001432238.1 CDS Rcas_2135 NC_009767.1 2745006 2746343 R KEGG: rrs:RoseRS_3039 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(2745006..2746343) Roseiflexus castenholzii DSM 13941 5539615 YP_001432239.1 CDS Rcas_2136 NC_009767.1 2746787 2747560 R in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE complement(2746787..2747560) Roseiflexus castenholzii DSM 13941 5539616 YP_001432240.1 CDS Rcas_2137 NC_009767.1 2747564 2748577 R TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rrs:RoseRS_3037 ribosomal protein L11 methyltransferase; 50S ribosomal protein L11 methyltransferase complement(2747564..2748577) Roseiflexus castenholzii DSM 13941 5539617 YP_001432241.1 CDS cysS NC_009767.1 2748547 2749983 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2748547..2749983) Roseiflexus castenholzii DSM 13941 5539618 YP_001432242.1 CDS Rcas_2139 NC_009767.1 2749989 2750768 R TIGRFAM: serine O-acetyltransferase; KEGG: rrs:RoseRS_3035 serine O-acetyltransferase; serine O-acetyltransferase complement(2749989..2750768) Roseiflexus castenholzii DSM 13941 5539619 YP_001432243.1 CDS Rcas_2140 NC_009767.1 2750948 2751247 R TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_3034 regulatory protein, FmdB family; FmdB family regulatory protein complement(2750948..2751247) Roseiflexus castenholzii DSM 13941 5539620 YP_001432244.1 CDS Rcas_2141 NC_009767.1 2751333 2752553 R PFAM: protein of unknown function DUF1006; KEGG: rrs:RoseRS_3033 protein of unknown function DUF1006; hypothetical protein complement(2751333..2752553) Roseiflexus castenholzii DSM 13941 5539621 YP_001432245.1 CDS Rcas_2142 NC_009767.1 2752643 2753110 D KEGG: rrs:RoseRS_3032 hypothetical protein; hypothetical protein 2752643..2753110 Roseiflexus castenholzii DSM 13941 5539622 YP_001432246.1 CDS Rcas_2143 NC_009767.1 2753123 2753755 R KEGG: rrs:RoseRS_3031 hypothetical protein; hypothetical protein complement(2753123..2753755) Roseiflexus castenholzii DSM 13941 5539623 YP_001432247.1 CDS Rcas_2144 NC_009767.1 2753978 2754616 R PFAM: peptidase M23B; KEGG: rrs:RoseRS_3030 peptidase M23B; peptidase M23B complement(2753978..2754616) Roseiflexus castenholzii DSM 13941 5539624 YP_001432248.1 CDS Rcas_2145 NC_009767.1 2754592 2755584 R KEGG: rrs:RoseRS_3029 hypothetical protein; hypothetical protein complement(2754592..2755584) Roseiflexus castenholzii DSM 13941 5539625 YP_001432249.1 CDS Rcas_2146 NC_009767.1 2755581 2756108 R KEGG: rrs:RoseRS_3028 hypothetical protein; hypothetical protein complement(2755581..2756108) Roseiflexus castenholzii DSM 13941 5539626 YP_001432250.1 CDS Rcas_2147 NC_009767.1 2756240 2757169 R PFAM: initiation factor 2B related; KEGG: rrs:RoseRS_3027 initiation factor 2B related; initiation factor 2B-like protein complement(2756240..2757169) Roseiflexus castenholzii DSM 13941 5539627 YP_001432251.1 CDS Rcas_2148 NC_009767.1 2757315 2759774 R KEGG: rrs:RoseRS_3026 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(2757315..2759774) Roseiflexus castenholzii DSM 13941 5539628 YP_001432252.1 CDS Rcas_2149 NC_009767.1 2759985 2761223 D PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3025 2-alkenal reductase; 2-alkenal reductase 2759985..2761223 Roseiflexus castenholzii DSM 13941 5539629 YP_001432253.1 CDS Rcas_2151 NC_009767.1 2761604 2762695 R KEGG: rrs:RoseRS_3024 hypothetical protein; hypothetical protein complement(2761604..2762695) Roseiflexus castenholzii DSM 13941 5539631 YP_001432254.1 CDS Rcas_2152 NC_009767.1 2762850 2764391 D KEGG: rrs:RoseRS_3023 hypothetical protein; hypothetical protein 2762850..2764391 Roseiflexus castenholzii DSM 13941 5539632 YP_001432255.1 CDS trpD NC_009767.1 2764760 2765782 R Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase complement(2764760..2765782) Roseiflexus castenholzii DSM 13941 5539633 YP_001432256.1 CDS Rcas_2154 NC_009767.1 2765769 2767196 R PFAM: protein of unknown function DUF407; KEGG: rrs:RoseRS_1453 hypothetical protein; hypothetical protein complement(2765769..2767196) Roseiflexus castenholzii DSM 13941 5539634 YP_001432257.1 CDS Rcas_2155 NC_009767.1 2767199 2767765 R TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: rrs:RoseRS_1454 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase complement(2767199..2767765) Roseiflexus castenholzii DSM 13941 5539635 YP_001432258.1 CDS Rcas_2156 NC_009767.1 2767762 2769315 R KEGG: rrs:RoseRS_1455 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; anthranilate synthase component I complement(2767762..2769315) Roseiflexus castenholzii DSM 13941 5539636 YP_001432259.1 CDS Rcas_2157 NC_009767.1 2770716 2771723 R catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase complement(2770716..2771723) Roseiflexus castenholzii DSM 13941 5539637 YP_001432260.1 CDS Rcas_2158 NC_009767.1 2771944 2773869 D KEGG: rrs:RoseRS_1457 hypothetical protein; hypothetical protein 2771944..2773869 Roseiflexus castenholzii DSM 13941 5539638 YP_001432261.1 CDS Rcas_2159 NC_009767.1 2774087 2775445 R catalyzes the formation of L-tryptophan from indole and L-serine; tryptophan synthase subunit beta complement(2774087..2775445) Roseiflexus castenholzii DSM 13941 5539639 YP_001432262.1 CDS Rcas_2160 NC_009767.1 2776440 2776685 R KEGG: rrs:RoseRS_1461 hypothetical protein; hypothetical protein complement(2776440..2776685) Roseiflexus castenholzii DSM 13941 5539640 YP_001432263.1 CDS Rcas_2161 NC_009767.1 2776698 2777219 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1462 FHA domain containing protein; FHA domain-containing protein complement(2776698..2777219) Roseiflexus castenholzii DSM 13941 5539641 YP_001432264.1 CDS Rcas_2162 NC_009767.1 2777336 2778613 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1463 von Willebrand factor, type A; von Willebrand factor A complement(2777336..2778613) Roseiflexus castenholzii DSM 13941 5539642 YP_001432265.1 CDS Rcas_2163 NC_009767.1 2778765 2779778 R PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_1464 protein phosphatase 2C domain protein; Ser/Thr phosphatase complement(2778765..2779778) Roseiflexus castenholzii DSM 13941 5539643 YP_001432266.1 CDS Rcas_2164 NC_009767.1 2779812 2781770 R PFAM: protein kinase; Pyrrolo-quinoline quinone; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1465 protein kinase; serine/threonine protein kinase complement(2779812..2781770) Roseiflexus castenholzii DSM 13941 5539644 YP_001432267.1 CDS Rcas_2165 NC_009767.1 2782173 2782808 D KEGG: rrs:RoseRS_1466 hypothetical protein; hypothetical protein 2782173..2782808 Roseiflexus castenholzii DSM 13941 5539645 YP_001432268.1 CDS Rcas_2166 NC_009767.1 2782816 2783976 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1467 radical SAM domain protein; radical SAM domain-containing protein complement(2782816..2783976) Roseiflexus castenholzii DSM 13941 5539646 YP_001432269.1 CDS Rcas_2167 NC_009767.1 2784194 2784568 R hypothetical protein complement(2784194..2784568) Roseiflexus castenholzii DSM 13941 5539647 YP_001432270.1 CDS Rcas_2168 NC_009767.1 2785088 2786113 D KEGG: rrs:RoseRS_1468 transcriptional regulator-like protein; transcriptional regulator-like protein 2785088..2786113 Roseiflexus castenholzii DSM 13941 5539649 YP_001432271.1 CDS Rcas_2169 NC_009767.1 2786163 2788628 R KEGG: rrs:RoseRS_1469 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(2786163..2788628) Roseiflexus castenholzii DSM 13941 5539650 YP_001432272.1 CDS Rcas_2170 NC_009767.1 2788758 2790788 R PFAM: Amylo-alpha-16-glucosidase; KEGG: rrs:RoseRS_1790 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase complement(2788758..2790788) Roseiflexus castenholzii DSM 13941 5539651 YP_001432273.1 CDS Rcas_2171 NC_009767.1 2791078 2791605 R KEGG: rrs:RoseRS_1791 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2791078..2791605) Roseiflexus castenholzii DSM 13941 5539652 YP_001432274.1 CDS Rcas_2172 NC_009767.1 2791744 2793441 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Polysulphide reductase NrfD; KEGG: rrs:RoseRS_1792 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cyclic nucleotide-binding protein 2791744..2793441 Roseiflexus castenholzii DSM 13941 5539653 YP_001432275.1 CDS Rcas_2173 NC_009767.1 2793460 2796510 D PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_1793 formate dehydrogenase; nitrate reductase 2793460..2796510 Roseiflexus castenholzii DSM 13941 5539654 YP_001432276.1 CDS Rcas_2174 NC_009767.1 2796513 2797562 D KEGG: rrs:RoseRS_1794 uncharacterized component of anaerobic dehydrogenase-like protein; anaerobic dehydrogenase-like protein 2796513..2797562 Roseiflexus castenholzii DSM 13941 5539655 YP_001432277.1 CDS Rcas_2175 NC_009767.1 2797604 2798296 D PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: rrs:RoseRS_1795 formylmethanofuran dehydrogenase, subunit E region; formylmethanofuran dehydrogenase subunit E 2797604..2798296 Roseiflexus castenholzii DSM 13941 5539656 YP_001432278.1 CDS Rcas_2176 NC_009767.1 2798191 2799387 R PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1796 ABC transporter related; ABC transporter-like protein complement(2798191..2799387) Roseiflexus castenholzii DSM 13941 5539657 YP_001432279.1 CDS Rcas_2177 NC_009767.1 2799384 2800064 R TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1797 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit complement(2799384..2800064) Roseiflexus castenholzii DSM 13941 5539658 YP_001432280.1 CDS Rcas_2178 NC_009767.1 2800061 2800867 R TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1798 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein complement(2800061..2800867) Roseiflexus castenholzii DSM 13941 5539659 YP_001432281.1 CDS Rcas_2179 NC_009767.1 2801216 2801776 R PFAM: transcriptional regulator PadR family protein; KEGG: sma:SAV6305 PadR-family transcriptional regulator; PadR-like family transcriptional regulator complement(2801216..2801776) Roseiflexus castenholzii DSM 13941 5539660 YP_001432282.1 CDS Rcas_2180 NC_009767.1 2801850 2803163 R KEGG: rrs:RoseRS_1799 hypothetical protein; hypothetical protein complement(2801850..2803163) Roseiflexus castenholzii DSM 13941 5539661 YP_001432283.1 CDS Rcas_2181 NC_009767.1 2803500 2804174 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1800 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(2803500..2804174) Roseiflexus castenholzii DSM 13941 5539662 YP_001432284.1 CDS Rcas_2182 NC_009767.1 2804191 2804928 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1801 ABC transporter related; ABC transporter-like protein complement(2804191..2804928) Roseiflexus castenholzii DSM 13941 5539663 YP_001432285.1 CDS Rcas_2183 NC_009767.1 2804960 2805613 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1802 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit complement(2804960..2805613) Roseiflexus castenholzii DSM 13941 5539664 YP_001432286.1 CDS Rcas_2184 NC_009767.1 2805618 2806505 R PFAM: extracellular solute-binding protein family 3; KEGG: rrs:RoseRS_1803 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(2805618..2806505) Roseiflexus castenholzii DSM 13941 5539665 YP_001432287.1 CDS Rcas_2186 NC_009767.1 2807631 2808965 R KEGG: rrs:RoseRS_1804 hypothetical protein; hypothetical protein complement(2807631..2808965) Roseiflexus castenholzii DSM 13941 5539667 YP_001432288.1 CDS Rcas_2187 NC_009767.1 2809167 2810570 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1074 peptidase M20; peptidase M20 complement(2809167..2810570) Roseiflexus castenholzii DSM 13941 5539668 YP_001432289.1 CDS Rcas_2188 NC_009767.1 2810582 2813125 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KR domain protein; KEGG: rrs:RoseRS_1073 thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate protein central region complement(2810582..2813125) Roseiflexus castenholzii DSM 13941 5539669 YP_001432290.1 CDS Rcas_2189 NC_009767.1 2813143 2814384 R KEGG: sat:SYN_01507 ATPase; ATPase complement(2813143..2814384) Roseiflexus castenholzii DSM 13941 5539670 YP_001432291.1 CDS Rcas_2190 NC_009767.1 2814450 2815874 R PFAM: aminotransferase class V; Pyridoxal-dependent decarboxylase; KEGG: rrs:RoseRS_1072 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase complement(2814450..2815874) Roseiflexus castenholzii DSM 13941 5539671 YP_001432292.1 CDS Rcas_2191 NC_009767.1 2815871 2817208 R KEGG: rrs:RoseRS_1071 Na+/melibiose symporter and related transporter-like protein; Na+/melibiose symporter and related transporter-like protein complement(2815871..2817208) Roseiflexus castenholzii DSM 13941 5539672 YP_001432293.1 CDS Rcas_2192 NC_009767.1 2817246 2817923 R PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_1070 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2817246..2817923) Roseiflexus castenholzii DSM 13941 5539673 YP_001432294.1 CDS Rcas_2193 NC_009767.1 2818490 2819224 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2818490..2819224 Roseiflexus castenholzii DSM 13941 5539674 YP_001432295.1 CDS Rcas_2194 NC_009767.1 2819246 2820022 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2819246..2820022 Roseiflexus castenholzii DSM 13941 5539675 YP_001432296.1 CDS Rcas_2195 NC_009767.1 2820044 2820736 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2820044..2820736 Roseiflexus castenholzii DSM 13941 5539676 YP_001432297.1 CDS Rcas_2196 NC_009767.1 2820758 2821411 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_1069 protein of unknown function DUF820; hypothetical protein 2820758..2821411 Roseiflexus castenholzii DSM 13941 5539677 YP_001432298.1 CDS Rcas_2197 NC_009767.1 2821552 2837163 R TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Cna B domain protein; KEGG: rrs:RoseRS_1068 conserved repeat domain; hypothetical protein complement(2821552..2837163) Roseiflexus castenholzii DSM 13941 5539678 YP_001432299.1 CDS Rcas_2198 NC_009767.1 2840286 2841044 R PFAM: dienelactone hydrolase; KEGG: rrs:RoseRS_2684 dienelactone hydrolase; dienelactone hydrolase complement(2840286..2841044) Roseiflexus castenholzii DSM 13941 5539679 YP_001432300.1 CDS Rcas_2199 NC_009767.1 2841246 2841989 D PFAM: YhhN family protein; KEGG: rrs:RoseRS_2683 YhhN family protein; YhhN family protein 2841246..2841989 Roseiflexus castenholzii DSM 13941 5539680 YP_001432301.1 CDS Rcas_2200 NC_009767.1 2841907 2842773 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: aau:AAur_0524 sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein complement(2841907..2842773) Roseiflexus castenholzii DSM 13941 5539681 YP_001432302.1 CDS Rcas_2201 NC_009767.1 2842770 2843546 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_2682 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(2842770..2843546) Roseiflexus castenholzii DSM 13941 5539682 YP_001432303.1 CDS Rcas_2202 NC_009767.1 2843575 2844645 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_2681 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(2843575..2844645) Roseiflexus castenholzii DSM 13941 5539683 YP_001432304.1 CDS Rcas_2203 NC_009767.1 2844642 2845769 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2680 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(2844642..2845769) Roseiflexus castenholzii DSM 13941 5539684 YP_001432305.1 CDS nadE NC_009767.1 2845959 2848037 R catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2845959..2848037) Roseiflexus castenholzii DSM 13941 5539685 YP_001432306.1 CDS Rcas_2205 NC_009767.1 2848099 2848425 R KEGG: rrs:RoseRS_2640 protein of unknown function DUF820; hypothetical protein complement(2848099..2848425) Roseiflexus castenholzii DSM 13941 5539686 YP_001432307.1 CDS Rcas_2206 NC_009767.1 2848949 2849431 R KEGG: rrs:RoseRS_2640 protein of unknown function DUF820; hypothetical protein complement(2848949..2849431) Roseiflexus castenholzii DSM 13941 5539687 YP_001432308.1 CDS Rcas_2207 NC_009767.1 2849491 2850420 D PFAM: pseudouridine synthase; KEGG: rrs:RoseRS_2639 pseudouridine synthase; pseudouridine synthase 2849491..2850420 Roseiflexus castenholzii DSM 13941 5539688 YP_001432309.1 CDS Rcas_2208 NC_009767.1 2850458 2851786 R PFAM: beta-lactamase; KEGG: rrs:RoseRS_2638 beta-lactamase; serine-type D-Ala-D-Ala carboxypeptidase complement(2850458..2851786) Roseiflexus castenholzii DSM 13941 5539689 YP_001432310.1 CDS Rcas_2209 NC_009767.1 2852690 2853955 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2637 glycosyl transferase, group 1; group 1 glycosyl transferase complement(2852690..2853955) Roseiflexus castenholzii DSM 13941 5539690 YP_001432311.1 CDS Rcas_2210 NC_009767.1 2854927 2855313 R TIGRFAM: death-on-curing family protein; PFAM: Death-on-curing protein; KEGG: ana:alr9029 death on curing protein; death-on-curing family protein complement(2854927..2855313) Roseiflexus castenholzii DSM 13941 5539691 YP_001432312.1 CDS Rcas_2211 NC_009767.1 2855313 2855510 R KEGG: ana:asr9028 unknown protein; hypothetical protein complement(2855313..2855510) Roseiflexus castenholzii DSM 13941 5539692 YP_001432313.1 CDS Rcas_2212 NC_009767.1 2856395 2857375 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_2636 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(2856395..2857375) Roseiflexus castenholzii DSM 13941 5539693 YP_001432314.1 CDS Rcas_2213 NC_009767.1 2858349 2859452 D PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_2430 radical SAM domain protein; radical SAM domain-containing protein 2858349..2859452 Roseiflexus castenholzii DSM 13941 5539694 YP_001432315.1 CDS Rcas_2214 NC_009767.1 2859929 2861113 R TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: rrs:RoseRS_2436 DNA replication and repair protein RecF; DNA replication and repair protein RecF complement(2859929..2861113) Roseiflexus castenholzii DSM 13941 5539695 YP_001432316.1 CDS Rcas_2215 NC_009767.1 2861140 2862177 R catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate; isopentenyl pyrophosphate isomerase complement(2861140..2862177) Roseiflexus castenholzii DSM 13941 5539696 YP_001432317.1 CDS Rcas_2216 NC_009767.1 2862709 2863473 D PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rrs:RoseRS_2438 peptidylprolyl isomerase; peptidyl-prolyl isomerase 2862709..2863473 Roseiflexus castenholzii DSM 13941 5539697 YP_001432318.1 CDS Rcas_2217 NC_009767.1 2863973 2866003 R KEGG: rrs:RoseRS_2439 hypothetical protein; hypothetical protein complement(2863973..2866003) Roseiflexus castenholzii DSM 13941 5539698 YP_001432319.1 CDS Rcas_2218 NC_009767.1 2866024 2866671 R KEGG: rrs:RoseRS_2440 hypothetical protein; hypothetical protein complement(2866024..2866671) Roseiflexus castenholzii DSM 13941 5539699 YP_001432320.1 CDS Rcas_2219 NC_009767.1 2866668 2869655 R KEGG: rrs:RoseRS_2441 hypothetical protein; FHA domain-containing protein complement(2866668..2869655) Roseiflexus castenholzii DSM 13941 5539700 YP_001432321.1 CDS Rcas_2220 NC_009767.1 2869713 2870384 R KEGG: rrs:RoseRS_2442 hypothetical protein; hypothetical protein complement(2869713..2870384) Roseiflexus castenholzii DSM 13941 5539701 YP_001432322.1 CDS Rcas_2221 NC_009767.1 2870550 2871314 R KEGG: rrs:RoseRS_2443 hypothetical protein; hypothetical protein complement(2870550..2871314) Roseiflexus castenholzii DSM 13941 5539702 YP_001432323.1 CDS Rcas_2222 NC_009767.1 2871390 2871632 R KEGG: rrs:RoseRS_2444 hypothetical protein; hypothetical protein complement(2871390..2871632) Roseiflexus castenholzii DSM 13941 5539703 YP_001432324.1 CDS Rcas_2223 NC_009767.1 2871629 2872102 R hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase complement(2871629..2872102) Roseiflexus castenholzii DSM 13941 5539704 YP_001432325.1 CDS Rcas_2224 NC_009767.1 2872099 2872527 R PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_2446 thioesterase superfamily protein; thioesterase superfamily protein complement(2872099..2872527) Roseiflexus castenholzii DSM 13941 5539705 YP_001432326.1 CDS Rcas_2225 NC_009767.1 2872558 2873064 R KEGG: cph:Cpha266_1502 type II site-specific deoxyribonuclease; hypothetical protein complement(2872558..2873064) Roseiflexus castenholzii DSM 13941 5539706 YP_001432327.1 CDS Rcas_2226 NC_009767.1 2873088 2875601 R KEGG: pmm:PMM0384 possible uncharacterized restriction enzyme, interrupted-C; restriction enzyme complement(2873088..2875601) Roseiflexus castenholzii DSM 13941 5539707 YP_001432328.1 CDS Rcas_2227 NC_009767.1 2875929 2876252 R PFAM: Excinuclease ABC C subunit domain protein; KEGG: cph:Cpha266_2317 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C complement(2875929..2876252) Roseiflexus castenholzii DSM 13941 5539708 YP_001432329.1 CDS Rcas_2228 NC_009767.1 2876810 2878390 R PFAM: Eco57I restriction endonuclease; KEGG: ajs:Ajs_0197 Eco57I restriction endonuclease; adenine-specific DNA methyltransferase complement(2876810..2878390) Roseiflexus castenholzii DSM 13941 5539709 YP_001432330.1 CDS Rcas_2229 NC_009767.1 2878365 2879030 R KEGG: cte:CT1159 type III restriction system methylase; type III restriction system methylase complement(2878365..2879030) Roseiflexus castenholzii DSM 13941 5539710 YP_001432331.1 CDS Rcas_2230 NC_009767.1 2879043 2879306 R hypothetical protein complement(2879043..2879306) Roseiflexus castenholzii DSM 13941 5539711 YP_001432332.1 CDS Rcas_2231 NC_009767.1 2879315 2880424 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sil:SPO3451 modification methylase; DNA methylase N-4/N-6 domain-containing protein complement(2879315..2880424) Roseiflexus castenholzii DSM 13941 5539712 YP_001432333.1 CDS Rcas_2232 NC_009767.1 2880538 2881158 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sen:SACE_4996 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2880538..2881158) Roseiflexus castenholzii DSM 13941 5539713 YP_001432334.1 CDS Rcas_2233 NC_009767.1 2881205 2881765 R PFAM: GCN5-related N-acetyltransferase; KEGG: probable aminoglycoside 2-N-acetyltransferase; N-acetyltransferase GCN5 complement(2881205..2881765) Roseiflexus castenholzii DSM 13941 5539714 YP_001432335.1 CDS Rcas_2234 NC_009767.1 2881829 2882752 R PFAM: peptidase M23B; KEGG: saj:SaurJH9_2233 peptidase M23B; peptidase M23B complement(2881829..2882752) Roseiflexus castenholzii DSM 13941 5539715 YP_001432336.1 CDS Rcas_2235 NC_009767.1 2882941 2883402 R KEGG: dps:DP2348 hypothetical protein; hypothetical protein complement(2882941..2883402) Roseiflexus castenholzii DSM 13941 5539716 YP_001432337.1 CDS Rcas_2236 NC_009767.1 2883548 2884492 R KEGG: hhe:HH0238 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(2883548..2884492) Roseiflexus castenholzii DSM 13941 5539717 YP_001432338.1 CDS Rcas_2237 NC_009767.1 2884591 2885271 R PFAM: Restriction endonuclease EcoRV; KEGG: hhe:HH0239 type II restriction endonuclease; restriction endonuclease EcoRV complement(2884591..2885271) Roseiflexus castenholzii DSM 13941 5539718 YP_001432339.1 CDS Rcas_2238 NC_009767.1 2885625 2885981 R hypothetical protein complement(2885625..2885981) Roseiflexus castenholzii DSM 13941 5539719 YP_001432340.1 CDS Rcas_2239 NC_009767.1 2886047 2888383 D PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_2447 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit 2886047..2888383 Roseiflexus castenholzii DSM 13941 5539720 YP_001432341.1 CDS Rcas_2240 NC_009767.1 2888448 2889062 D PFAM: SH3 type 3 domain protein; KEGG: rrs:RoseRS_2448 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 2888448..2889062 Roseiflexus castenholzii DSM 13941 5539721 YP_001432342.1 CDS Rcas_2241 NC_009767.1 2889069 2890274 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rrs:RoseRS_2449 chromate transporter, chromate ion transporter (CHR) family; chromate transporter 2889069..2890274 Roseiflexus castenholzii DSM 13941 5539722 YP_001432343.1 CDS Rcas_2242 NC_009767.1 2890287 2892539 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_2450 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2890287..2892539 Roseiflexus castenholzii DSM 13941 5539723 YP_001432344.1 CDS Rcas_2243 NC_009767.1 2892799 2894190 D PFAM: Amidase; KEGG: rrs:RoseRS_3083 amidase; amidase 2892799..2894190 Roseiflexus castenholzii DSM 13941 5539724 YP_001432345.1 CDS Rcas_2244 NC_009767.1 2894194 2895075 D PFAM: protein of unknown function DUF72; KEGG: rrs:RoseRS_3084 protein of unknown function DUF72; hypothetical protein 2894194..2895075 Roseiflexus castenholzii DSM 13941 5539725 YP_001432346.1 CDS Rcas_2245 NC_009767.1 2895570 2895908 R hypothetical protein complement(2895570..2895908) Roseiflexus castenholzii DSM 13941 5539726 YP_001432347.1 CDS Rcas_2246 NC_009767.1 2896113 2897888 D KEGG: aav:Aave_2156 polymorphic outer membrane protein; hypothetical protein 2896113..2897888 Roseiflexus castenholzii DSM 13941 5539727 YP_001432348.1 CDS Rcas_2247 NC_009767.1 2898314 2898526 D KEGG: rrs:RoseRS_3085 hypothetical protein; hypothetical protein 2898314..2898526 Roseiflexus castenholzii DSM 13941 5539728 YP_001432349.1 CDS Rcas_2248 NC_009767.1 2898648 2899952 D PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3086 periplasmic binding protein; periplasmic binding protein 2898648..2899952 Roseiflexus castenholzii DSM 13941 5539729 YP_001432350.1 CDS Rcas_2249 NC_009767.1 2899967 2900305 D KEGG: rrs:RoseRS_3087 ferredoxin-like protein; ferredoxin-like protein 2899967..2900305 Roseiflexus castenholzii DSM 13941 5539730 YP_001432351.1 CDS Rcas_2250 NC_009767.1 2900342 2901466 D PFAM: transport system permease; KEGG: rrs:RoseRS_3088 transport system permease; transport system permease 2900342..2901466 Roseiflexus castenholzii DSM 13941 5539731 YP_001432352.1 CDS Rcas_2251 NC_009767.1 2901463 2902491 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3089 ABC transporter related; ABC transporter-like protein 2901463..2902491 Roseiflexus castenholzii DSM 13941 5539732 YP_001432353.1 CDS Rcas_2252 NC_009767.1 2902643 2903218 D KEGG: rrs:RoseRS_3090 hypothetical protein; hypothetical protein 2902643..2903218 Roseiflexus castenholzii DSM 13941 5539733 YP_001432354.1 CDS Rcas_2253 NC_009767.1 2903805 2905361 D PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; GAF domain protein; KEGG: rrs:RoseRS_1638 adenylate/guanylate cyclase; adenylate cyclase 2903805..2905361 Roseiflexus castenholzii DSM 13941 5539734 YP_001432355.1 CDS Rcas_2254 NC_009767.1 2905400 2906620 D PFAM: PSP1 domain protein; KEGG: rrs:RoseRS_1637 PSP1 domain protein; PSP1 domain-containing protein 2905400..2906620 Roseiflexus castenholzii DSM 13941 5539735 YP_001432356.1 CDS Rcas_2255 NC_009767.1 2906638 2907687 D PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_1636 oxidoreductase domain protein; oxidoreductase domain-containing protein 2906638..2907687 Roseiflexus castenholzii DSM 13941 5539736 YP_001432357.1 CDS Rcas_2256 NC_009767.1 2907691 2908563 D PFAM: protein of unknown function DUF344; KEGG: rrs:RoseRS_1635 protein of unknown function DUF344; hypothetical protein 2907691..2908563 Roseiflexus castenholzii DSM 13941 5539737 YP_001432358.1 CDS Rcas_2257 NC_009767.1 2908560 2909375 D TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: rrs:RoseRS_1634 maf protein; maf protein 2908560..2909375 Roseiflexus castenholzii DSM 13941 5539738 YP_001432359.1 CDS Rcas_2258 NC_009767.1 2909354 2910118 D PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; KEGG: rrs:RoseRS_1633 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2909354..2910118 Roseiflexus castenholzii DSM 13941 5539739 YP_001432360.1 CDS Rcas_2259 NC_009767.1 2910111 2911205 D PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_1632 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 2910111..2911205 Roseiflexus castenholzii DSM 13941 5539740 YP_001432361.1 CDS Rcas_2260 NC_009767.1 2911208 2912254 D PFAM: WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1631 WD40 domain protein beta propeller; WD40 domain-containing protein 2911208..2912254 Roseiflexus castenholzii DSM 13941 5539741 YP_001432362.1 CDS Rcas_2261 NC_009767.1 2912254 2913546 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1630 glycosyl transferase, group 1; group 1 glycosyl transferase 2912254..2913546 Roseiflexus castenholzii DSM 13941 5539742 YP_001432363.1 CDS Rcas_2262 NC_009767.1 2913976 2914578 D hypothetical protein 2913976..2914578 Roseiflexus castenholzii DSM 13941 5539743 YP_001432364.1 CDS Rcas_2263 NC_009767.1 2914950 2915231 D KEGG: rrs:RoseRS_1629 membrane protein-like protein; hypothetical protein 2914950..2915231 Roseiflexus castenholzii DSM 13941 5539744 YP_001432365.1 CDS Rcas_2264 NC_009767.1 2915250 2917418 D PFAM: Na+/solute symporter; KEGG: rrs:RoseRS_1628 Na+/solute symporter; Na+/solute symporter 2915250..2917418 Roseiflexus castenholzii DSM 13941 5539745 YP_001432366.1 CDS Rcas_2265 NC_009767.1 2917624 2918826 D PFAM: sodium/hydrogen exchanger; KEGG: pfu:PF0275 Na+/H+ antiporter; sodium/hydrogen exchanger 2917624..2918826 Roseiflexus castenholzii DSM 13941 5539746 YP_001432367.1 CDS Rcas_2266 NC_009767.1 2919456 2920628 R KEGG: rrs:RoseRS_1626 hypothetical protein; hypothetical protein complement(2919456..2920628) Roseiflexus castenholzii DSM 13941 5539747 YP_001432368.1 CDS Rcas_2267 NC_009767.1 2920643 2920906 R KEGG: rrs:RoseRS_1625 hypothetical protein; hypothetical protein complement(2920643..2920906) Roseiflexus castenholzii DSM 13941 5539748 YP_001432369.1 CDS Rcas_2268 NC_009767.1 2920903 2921166 R KEGG: rrs:RoseRS_1624 hypothetical protein; hypothetical protein complement(2920903..2921166) Roseiflexus castenholzii DSM 13941 5539749 YP_001432370.1 CDS Rcas_2269 NC_009767.1 2921420 2924032 R KEGG: rrs:RoseRS_1623 helicase; helicase complement(2921420..2924032) Roseiflexus castenholzii DSM 13941 5539750 YP_001432371.1 CDS Rcas_2270 NC_009767.1 2924204 2925037 R KEGG: rrs:RoseRS_1622 hypothetical protein; hypothetical protein complement(2924204..2925037) Roseiflexus castenholzii DSM 13941 5539751 YP_001432372.1 CDS Rcas_2271 NC_009767.1 2925105 2925800 R KEGG: rrs:RoseRS_1621 FHA domain containing protein; FHA domain-containing protein complement(2925105..2925800) Roseiflexus castenholzii DSM 13941 5539752 YP_001432373.1 CDS Rcas_2272 NC_009767.1 2926403 2927188 R KEGG: gvi:glr3087 hypothetical protein; hypothetical protein complement(2926403..2927188) Roseiflexus castenholzii DSM 13941 5539753 YP_001432374.1 CDS Rcas_2273 NC_009767.1 2927291 2927665 R hypothetical protein complement(2927291..2927665) Roseiflexus castenholzii DSM 13941 5539754 YP_001432375.1 CDS Rcas_2274 NC_009767.1 2927860 2931207 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: rrs:RoseRS_1513 protease-associated PA domain protein; protease domain-containing protein 2927860..2931207 Roseiflexus castenholzii DSM 13941 5539755 YP_001432376.1 CDS Rcas_2275 NC_009767.1 2931960 2932649 R KEGG: rrs:RoseRS_1515 hypothetical protein; hypothetical protein complement(2931960..2932649) Roseiflexus castenholzii DSM 13941 5539756 YP_001432377.1 CDS Rcas_2276 NC_009767.1 2933225 2934475 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: gsu:GSU0493 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2933225..2934475) Roseiflexus castenholzii DSM 13941 5539757 YP_001432378.1 CDS Rcas_2277 NC_009767.1 2934626 2937370 D PFAM: peptidase C11 clostripain; KEGG: rrs:RoseRS_1520 FHA domain containing protein; peptidase C11 clostripain 2934626..2937370 Roseiflexus castenholzii DSM 13941 5539758 YP_001432379.1 CDS Rcas_2278 NC_009767.1 2937843 2940101 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1519 protein kinase; serine/threonine protein kinase 2937843..2940101 Roseiflexus castenholzii DSM 13941 5539759 YP_001432380.1 CDS Rcas_2279 NC_009767.1 2940049 2940777 R KEGG: rrs:RoseRS_1518 hypothetical protein; hypothetical protein complement(2940049..2940777) Roseiflexus castenholzii DSM 13941 5539760 YP_001432381.1 CDS Rcas_2280 NC_009767.1 2940933 2941832 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bha:BH3305 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2940933..2941832 Roseiflexus castenholzii DSM 13941 5539761 YP_001432382.1 CDS Rcas_2281 NC_009767.1 2942014 2943570 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 complement(2942014..2943570) Roseiflexus castenholzii DSM 13941 5539762 YP_001432383.1 CDS Rcas_2282 NC_009767.1 2944074 2944991 R KEGG: rrs:RoseRS_1523 hypothetical protein; hypothetical protein complement(2944074..2944991) Roseiflexus castenholzii DSM 13941 5539763 YP_001432384.1 CDS Rcas_2283 NC_009767.1 2945210 2946547 R PFAM: glycine cleavage system P-protein; KEGG: rrs:RoseRS_1524 glycine dehydrogenase (decarboxylating); glycine dehydrogenase complement(2945210..2946547) Roseiflexus castenholzii DSM 13941 5539764 YP_001432385.1 CDS Rcas_2284 NC_009767.1 2946790 2947179 R TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: rrs:RoseRS_1525 glycine cleavage system H protein; glycine cleavage system H protein complement(2946790..2947179) Roseiflexus castenholzii DSM 13941 5539765 YP_001432386.1 CDS Rcas_2285 NC_009767.1 2947221 2948333 R TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rrs:RoseRS_1526 glycine cleavage system T protein; glycine cleavage system T protein complement(2947221..2948333) Roseiflexus castenholzii DSM 13941 5539766 YP_001432387.1 CDS Rcas_2286 NC_009767.1 2948618 2949409 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_1527 response regulator receiver protein; response regulator receiver protein complement(2948618..2949409) Roseiflexus castenholzii DSM 13941 5539767 YP_001432388.1 CDS Rcas_2287 NC_009767.1 2949372 2952338 R SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_1528 PBS lyase heat domain protein repeat-containing protein; PBS lyase complement(2949372..2952338) Roseiflexus castenholzii DSM 13941 5539768 YP_001432389.1 CDS Rcas_2288 NC_009767.1 2952581 2954896 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1529 protein kinase; serine/threonine protein kinase 2952581..2954896 Roseiflexus castenholzii DSM 13941 5539769 YP_001432390.1 CDS Rcas_2289 NC_009767.1 2954953 2956095 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1530 glycosyl transferase, group 1; group 1 glycosyl transferase 2954953..2956095 Roseiflexus castenholzii DSM 13941 5539770 YP_001432391.1 CDS Rcas_2290 NC_009767.1 2956290 2957477 D KEGG: rrs:RoseRS_1532 PT repeat-containing protein; PT repeat-containing protein 2956290..2957477 Roseiflexus castenholzii DSM 13941 5539771 YP_001432392.1 CDS recR NC_009767.1 2957634 2958251 R involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR complement(2957634..2958251) Roseiflexus castenholzii DSM 13941 5539772 YP_001432393.1 CDS Rcas_2292 NC_009767.1 2958458 2958760 R PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1534 conserved hypothetical protein 103; hypothetical protein complement(2958458..2958760) Roseiflexus castenholzii DSM 13941 5539773 YP_001432394.1 CDS Rcas_2293 NC_009767.1 2958776 2960710 R KEGG: rrs:RoseRS_1535 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(2958776..2960710) Roseiflexus castenholzii DSM 13941 5539774 YP_001432395.1 CDS Rcas_2294 NC_009767.1 2960847 2961806 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2797 protein of unknown function DUF820; hypothetical protein complement(2960847..2961806) Roseiflexus castenholzii DSM 13941 5539775 YP_001432396.1 CDS Rcas_2295 NC_009767.1 2962197 2963141 D KEGG: rrs:RoseRS_1536 hypothetical protein; hypothetical protein 2962197..2963141 Roseiflexus castenholzii DSM 13941 5539776 YP_001432397.1 CDS Rcas_2296 NC_009767.1 2963303 2964157 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1537 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(2963303..2964157) Roseiflexus castenholzii DSM 13941 5539777 YP_001432398.1 CDS Rcas_2297 NC_009767.1 2964179 2965111 R PFAM: protein of unknown function DUF849; KEGG: rrs:RoseRS_1538 protein of unknown function DUF849; hypothetical protein complement(2964179..2965111) Roseiflexus castenholzii DSM 13941 5539778 YP_001432399.1 CDS Rcas_2298 NC_009767.1 2965130 2965834 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1539 ABC transporter related; ABC transporter-like protein complement(2965130..2965834) Roseiflexus castenholzii DSM 13941 5539779 YP_001432400.1 CDS Rcas_2299 NC_009767.1 2965821 2966549 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1540 ABC transporter related; ABC transporter-like protein complement(2965821..2966549) Roseiflexus castenholzii DSM 13941 5539780 YP_001432401.1 CDS Rcas_2300 NC_009767.1 2966843 2967604 R PFAM: cyclase family protein; KEGG: rrs:RoseRS_1541 cyclase family protein; cyclase family protein complement(2966843..2967604) Roseiflexus castenholzii DSM 13941 5539781 YP_001432402.1 CDS Rcas_2301 NC_009767.1 2967601 2968587 R PFAM: inner-membrane translocator; KEGG: bbr:BB1491 high-affinity branched-chain amino acid transporter membrane protein; inner-membrane translocator complement(2967601..2968587) Roseiflexus castenholzii DSM 13941 5539782 YP_001432403.1 CDS Rcas_2302 NC_009767.1 2968600 2969469 R PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_1543 inner-membrane translocator; inner-membrane translocator complement(2968600..2969469) Roseiflexus castenholzii DSM 13941 5539783 YP_001432404.1 CDS Rcas_2303 NC_009767.1 2969476 2970774 R PFAM: Extracellular ligand-binding receptor; KEGG: rrs:RoseRS_1544 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2969476..2970774) Roseiflexus castenholzii DSM 13941 5539784 YP_001432405.1 CDS Rcas_2304 NC_009767.1 2970814 2971488 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rrs:RoseRS_1545 GntR domain protein; GntR family transcriptional regulator complement(2970814..2971488) Roseiflexus castenholzii DSM 13941 5539785 YP_001432406.1 CDS Rcas_2305 NC_009767.1 2971655 2973205 D TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_1548 delta-1-pyrroline-5-carboxylate dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 2971655..2973205 Roseiflexus castenholzii DSM 13941 5539786 YP_001432407.1 CDS Rcas_2306 NC_009767.1 2973974 2975470 D PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: rrs:RoseRS_1549 carboxypeptidase Taq; carboxypeptidase Taq 2973974..2975470 Roseiflexus castenholzii DSM 13941 5539787 YP_001432408.1 CDS Rcas_2307 NC_009767.1 2975561 2976274 D PFAM: Rare lipoprotein A; KEGG: rrs:RoseRS_1550 rare lipoprotein A; rare lipoprotein A 2975561..2976274 Roseiflexus castenholzii DSM 13941 5539788 YP_001432409.1 CDS Rcas_2308 NC_009767.1 2976530 2978377 D PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rrs:RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 2976530..2978377 Roseiflexus castenholzii DSM 13941 5539789 YP_001432410.1 CDS Rcas_2309 NC_009767.1 2978672 2979718 D catalyzes the coenzyme A-dependent formation of succinyl-CoA from 2-oxoglutarate and ferredoxin; 2-oxoglutarate ferredoxin oxidoreductase subunit beta 2978672..2979718 Roseiflexus castenholzii DSM 13941 5539790 YP_001432411.1 CDS Rcas_2310 NC_009767.1 2979827 2980192 D PFAM: regulatory protein ArsR; KEGG: rrs:RoseRS_1223 regulatory protein, ArsR; ArsR family transcriptional regulator 2979827..2980192 Roseiflexus castenholzii DSM 13941 5539791 YP_001432412.1 CDS Rcas_2311 NC_009767.1 2980459 2980953 D PFAM: GCN5-related N-acetyltransferase; KEGG: rxy:Rxyl_2877 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2980459..2980953 Roseiflexus castenholzii DSM 13941 5539792 YP_001432413.1 CDS Rcas_2312 NC_009767.1 2980904 2981734 D PFAM: RNA methylase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1224 methyltransferase type 11; type 11 methyltransferase 2980904..2981734 Roseiflexus castenholzii DSM 13941 5539793 YP_001432414.1 CDS Rcas_2313 NC_009767.1 2981839 2983137 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1225 major facilitator superfamily MFS_1; major facilitator transporter complement(2981839..2983137) Roseiflexus castenholzii DSM 13941 5539794 YP_001432415.1 CDS Rcas_2314 NC_009767.1 2983185 2984195 R KEGG: rrs:RoseRS_1226 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(2983185..2984195) Roseiflexus castenholzii DSM 13941 5539795 YP_001432416.1 CDS Rcas_2315 NC_009767.1 2984225 2985001 R PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein ArsR; KEGG: rrs:RoseRS_1227 protein tyrosine phosphatase; ArsR family transcriptional regulator complement(2984225..2985001) Roseiflexus castenholzii DSM 13941 5539796 YP_001432417.1 CDS Rcas_2316 NC_009767.1 2985019 2985786 R PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein ArsR; KEGG: rrs:RoseRS_1228 protein tyrosine phosphatase; ArsR family transcriptional regulator complement(2985019..2985786) Roseiflexus castenholzii DSM 13941 5539797 YP_001432418.1 CDS Rcas_2317 NC_009767.1 2986741 2988759 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rrs:RoseRS_1692 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(2986741..2988759) Roseiflexus castenholzii DSM 13941 5539798 YP_001432419.1 CDS Rcas_2318 NC_009767.1 2988883 2989398 R KEGG: rrs:RoseRS_1693 hypothetical protein; hypothetical protein complement(2988883..2989398) Roseiflexus castenholzii DSM 13941 5539799 YP_001432420.1 CDS Rcas_2319 NC_009767.1 2989535 2990473 R KEGG: rrs:RoseRS_1694 UV damage repair endonuclease-like protein; UV damage repair endonuclease-like protein complement(2989535..2990473) Roseiflexus castenholzii DSM 13941 5539800 YP_001432421.1 CDS Rcas_2320 NC_009767.1 2990594 2992117 D TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: rrs:RoseRS_1695 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 2990594..2992117 Roseiflexus castenholzii DSM 13941 5539801 YP_001432422.1 CDS Rcas_2321 NC_009767.1 2992108 2992665 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1696 FHA domain containing protein; FHA domain-containing protein complement(2992108..2992665) Roseiflexus castenholzii DSM 13941 5539802 YP_001432423.1 CDS Rcas_2322 NC_009767.1 2992991 2994235 D PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rrs:RoseRS_1697 protein of unknown function DUF190; hypothetical protein 2992991..2994235 Roseiflexus castenholzii DSM 13941 5539803 YP_001432424.1 CDS Rcas_2323 NC_009767.1 2994260 2995309 R PFAM: Polyprenyl synthetase; KEGG: rrs:RoseRS_1698 polyprenyl synthetase; polyprenyl synthetase complement(2994260..2995309) Roseiflexus castenholzii DSM 13941 5539804 YP_001432425.1 CDS Rcas_2324 NC_009767.1 2995568 2996209 R PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1699 phosphoglycerate mutase; phosphoglycerate mutase complement(2995568..2996209) Roseiflexus castenholzii DSM 13941 5539805 YP_001432426.1 CDS Rcas_2325 NC_009767.1 2996345 2997277 D KEGG: rrs:RoseRS_1700 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2996345..2997277 Roseiflexus castenholzii DSM 13941 5539806 YP_001432427.1 CDS Rcas_2326 NC_009767.1 2997320 2999758 R PFAM: peptidase C1A papain; KEGG: rrs:RoseRS_2451 peptidase C1A, papain; peptidase C1A papain complement(2997320..2999758) Roseiflexus castenholzii DSM 13941 5539807 YP_001432428.1 CDS Rcas_2327 NC_009767.1 3000323 3004528 D PFAM: Fibronectin type III domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_2452 alpha amylase, catalytic region; alpha amylase catalytic domain-containing protein 3000323..3004528 Roseiflexus castenholzii DSM 13941 5539808 YP_001432429.1 CDS Rcas_2328 NC_009767.1 3005108 3005878 R PFAM: Protein of unknown function DUF1626; KEGG: rrs:RoseRS_0534 protein of unknown function DUF1626; hypothetical protein complement(3005108..3005878) Roseiflexus castenholzii DSM 13941 5539809 YP_001432430.1 CDS Rcas_2329 NC_009767.1 3005881 3006480 R KEGG: rrs:RoseRS_0620 hypothetical protein; hypothetical protein complement(3005881..3006480) Roseiflexus castenholzii DSM 13941 5539810 YP_001432431.1 CDS Rcas_2330 NC_009767.1 3006681 3006959 D PFAM: PspC domain protein; KEGG: rrs:RoseRS_2455 phage shock protein C, PspC; phage shock protein PspC 3006681..3006959 Roseiflexus castenholzii DSM 13941 5539811 YP_001432432.1 CDS Rcas_2331 NC_009767.1 3007069 3008667 R TIGRFAM: Acyltransferase WS/DGAT/MGAT family protein; PFAM: protein of unknown function UPF0089; KEGG: rrs:RoseRS_2456 protein of unknown function UPF0089; acyltransferase complement(3007069..3008667) Roseiflexus castenholzii DSM 13941 5539812 YP_001432433.1 CDS Rcas_2332 NC_009767.1 3008793 3009248 D KEGG: rrs:RoseRS_2458 hypothetical protein; hypothetical protein 3008793..3009248 Roseiflexus castenholzii DSM 13941 5539813 YP_001432434.1 CDS Rcas_2333 NC_009767.1 3009451 3010239 D PFAM: purine or other phosphorylase family 1; KEGG: rrs:RoseRS_2457 purine or other phosphorylase, family 1; purine phosphorylase family 1 3009451..3010239 Roseiflexus castenholzii DSM 13941 5539814 YP_001432435.1 CDS Rcas_2334 NC_009767.1 3010976 3012634 D KEGG: rrs:RoseRS_2459 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 3010976..3012634 Roseiflexus castenholzii DSM 13941 5539815 YP_001432436.1 CDS Rcas_2335 NC_009767.1 3012659 3013765 D PFAM: NAD/NADP octopine/nopaline dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: rrs:RoseRS_2460 NAD/NADP octopine/nopaline dehydrogenase; NAD/NADP octopine/nopaline dehydrogenase 3012659..3013765 Roseiflexus castenholzii DSM 13941 5539816 YP_001432437.1 CDS asnB NC_009767.1 3014989 3016485 D functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 3014989..3016485 Roseiflexus castenholzii DSM 13941 5539817 YP_001432438.1 CDS Rcas_2337 NC_009767.1 3016792 3017232 D KEGG: rrs:RoseRS_2464 hypothetical protein; hypothetical protein 3016792..3017232 Roseiflexus castenholzii DSM 13941 5539818 YP_001432439.1 CDS Rcas_2338 NC_009767.1 3017318 3017845 R PFAM: Ferritin Dps family protein; KEGG: rrs:RoseRS_2466 ferritin, Dps family protein; ferritin Dps family protein complement(3017318..3017845) Roseiflexus castenholzii DSM 13941 5539819 YP_001432440.1 CDS Rcas_2339 NC_009767.1 3017945 3018286 R KEGG: rrs:RoseRS_2467 hypothetical protein; hypothetical protein complement(3017945..3018286) Roseiflexus castenholzii DSM 13941 5539820 YP_001432441.1 CDS Rcas_2340 NC_009767.1 3018836 3019615 R TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: rrs:RoseRS_2469 LPXTG-motif cell wall anchor domain; cell wall anchor domain-containing protein complement(3018836..3019615) Roseiflexus castenholzii DSM 13941 5539821 YP_001432442.1 CDS Rcas_2341 NC_009767.1 3019879 3020916 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2470 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3019879..3020916) Roseiflexus castenholzii DSM 13941 5539822 YP_001432443.1 CDS Rcas_2342 NC_009767.1 3020926 3022137 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2471 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3020926..3022137) Roseiflexus castenholzii DSM 13941 5539823 YP_001432444.1 CDS Rcas_2343 NC_009767.1 3022380 3023483 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2472 methyltransferase type 11; type 11 methyltransferase complement(3022380..3023483) Roseiflexus castenholzii DSM 13941 5539824 YP_001432445.1 CDS Rcas_2344 NC_009767.1 3023825 3024859 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2473 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3023825..3024859 Roseiflexus castenholzii DSM 13941 5539825 YP_001432446.1 CDS Rcas_2345 NC_009767.1 3025402 3031011 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2009 TPR repeat-containing protein; hypothetical protein 3025402..3031011 Roseiflexus castenholzii DSM 13941 5539826 YP_001432447.1 CDS Rcas_2346 NC_009767.1 3031076 3031468 R PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3040 HEPN domain protein; HEPN domain-containing protein complement(3031076..3031468) Roseiflexus castenholzii DSM 13941 5539827 YP_001432448.1 CDS Rcas_2347 NC_009767.1 3031452 3031802 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3041 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(3031452..3031802) Roseiflexus castenholzii DSM 13941 5539828 YP_001432449.1 CDS Rcas_2348 NC_009767.1 3031884 3032648 D KEGG: rrs:RoseRS_2010 hypothetical protein; hypothetical protein 3031884..3032648 Roseiflexus castenholzii DSM 13941 5539829 YP_001432450.1 CDS Rcas_2349 NC_009767.1 3033190 3033450 D PFAM: protein of unknown function UPF0175; KEGG: cph:Cpha266_0647 hypothetical protein; hypothetical protein 3033190..3033450 Roseiflexus castenholzii DSM 13941 5539830 YP_001432451.1 CDS Rcas_2350 NC_009767.1 3033443 3033937 D KEGG: tko:TK0918 hypothetical protein; hypothetical protein 3033443..3033937 Roseiflexus castenholzii DSM 13941 5539831 YP_001432452.1 CDS Rcas_2351 NC_009767.1 3034170 3034409 R hypothetical protein complement(3034170..3034409) Roseiflexus castenholzii DSM 13941 5539832 YP_001432453.1 CDS Rcas_2352 NC_009767.1 3034888 3035088 D hypothetical protein 3034888..3035088 Roseiflexus castenholzii DSM 13941 5539833 YP_001432454.1 CDS Rcas_2353 NC_009767.1 3035121 3036050 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2474 ABC transporter related; ABC transporter-like protein 3035121..3036050 Roseiflexus castenholzii DSM 13941 5539834 YP_001432455.1 CDS Rcas_2354 NC_009767.1 3036070 3036972 D TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: rrs:RoseRS_2475 ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A 3036070..3036972 Roseiflexus castenholzii DSM 13941 5539835 YP_001432456.1 CDS Rcas_2355 NC_009767.1 3037144 3037746 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2476 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3037144..3037746 Roseiflexus castenholzii DSM 13941 5539836 YP_001432457.1 CDS Rcas_2356 NC_009767.1 3037750 3038610 D PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2477 ABC-2 type transporter; ABC-2 type transporter 3037750..3038610 Roseiflexus castenholzii DSM 13941 5539837 YP_001432458.1 CDS Rcas_2357 NC_009767.1 3039417 3040775 D KEGG: rrs:RoseRS_2478 hypothetical protein; hypothetical protein 3039417..3040775 Roseiflexus castenholzii DSM 13941 5539838 YP_001432459.1 CDS Rcas_2358 NC_009767.1 3042809 3043939 R PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_2479 ABC-2 type transporter; ABC-2 type transporter complement(3042809..3043939) Roseiflexus castenholzii DSM 13941 5539839 YP_001432460.1 CDS Rcas_2359 NC_009767.1 3043952 3045187 R PFAM: beta-lactamase; KEGG: rrs:RoseRS_2480 beta-lactamase; beta-lactamase complement(3043952..3045187) Roseiflexus castenholzii DSM 13941 5539840 YP_001432461.1 CDS Rcas_2360 NC_009767.1 3045255 3046490 R PFAM: PAS fold-4 domain protein; KEGG: rrs:RoseRS_2481 PAS fold-4 domain protein; PAS domain-containing protein complement(3045255..3046490) Roseiflexus castenholzii DSM 13941 5539841 YP_001432462.1 CDS Rcas_2362 NC_009767.1 3047442 3049628 D KEGG: rrs:RoseRS_2483 dehydrogenase-like protein; dehydrogenase-like protein 3047442..3049628 Roseiflexus castenholzii DSM 13941 5539843 YP_001432463.1 CDS Rcas_2363 NC_009767.1 3049633 3050049 D PFAM: cytochrome c class I; KEGG: rrs:RoseRS_2484 cytochrome c, class I; cytochrome c class I 3049633..3050049 Roseiflexus castenholzii DSM 13941 5539844 YP_001432464.1 CDS Rcas_2364 NC_009767.1 3050152 3051210 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2485 alpha/beta hydrolase fold; alpha/beta hydrolase complement(3050152..3051210) Roseiflexus castenholzii DSM 13941 5539845 YP_001432465.1 CDS Rcas_2365 NC_009767.1 3051213 3051983 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_2486 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase complement(3051213..3051983) Roseiflexus castenholzii DSM 13941 5539846 YP_001432466.1 CDS Rcas_2366 NC_009767.1 3052067 3052678 R KEGG: rrs:RoseRS_2487 conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family-like protein; flavoprotein oxygenase DIM6/NTAB family-like protein complement(3052067..3052678) Roseiflexus castenholzii DSM 13941 5539847 YP_001432467.1 CDS Rcas_2367 NC_009767.1 3052834 3053814 D KEGG: rrs:RoseRS_2488 hypothetical protein; hypothetical protein 3052834..3053814 Roseiflexus castenholzii DSM 13941 5539848 YP_001432468.1 CDS Rcas_2368 NC_009767.1 3053811 3054239 D PFAM: protein of unknown function DUF55; KEGG: rrs:RoseRS_2489 protein of unknown function DUF55; hypothetical protein 3053811..3054239 Roseiflexus castenholzii DSM 13941 5539849 YP_001432469.1 CDS Rcas_2369 NC_009767.1 3054394 3055929 R KEGG: rrs:RoseRS_2490 hypothetical protein; hypothetical protein complement(3054394..3055929) Roseiflexus castenholzii DSM 13941 5539850 YP_001432470.1 CDS Rcas_2370 NC_009767.1 3056127 3057278 D KEGG: eca:ECA2426 oligogalacturonate lyase; oligogalacturonide lyase 3056127..3057278 Roseiflexus castenholzii DSM 13941 5539851 YP_001432471.1 CDS Rcas_2371 NC_009767.1 3057305 3059119 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: llm:llmg_0063 sulphate transporter; sulfate transporter complement(3057305..3059119) Roseiflexus castenholzii DSM 13941 5539852 YP_001432472.1 CDS Rcas_2372 NC_009767.1 3059333 3059683 R PFAM: regulatory protein ArsR; KEGG: bcz:pE33L466_0439 transcriptional regulator; ArsR family transcriptional regulator complement(3059333..3059683) Roseiflexus castenholzii DSM 13941 5539853 YP_001432473.1 CDS Rcas_2373 NC_009767.1 3059941 3061215 R KEGG: rrs:RoseRS_4189 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor protein complement(3059941..3061215) Roseiflexus castenholzii DSM 13941 5539854 YP_001432474.1 CDS Rcas_2374 NC_009767.1 3061383 3061874 R KEGG: hch:HCH_02935 hypothetical protein; hypothetical protein complement(3061383..3061874) Roseiflexus castenholzii DSM 13941 5539855 YP_001432475.1 CDS Rcas_2375 NC_009767.1 3061893 3062372 R hypothetical protein complement(3061893..3062372) Roseiflexus castenholzii DSM 13941 5539856 YP_001432476.1 CDS Rcas_2376 NC_009767.1 3062419 3063447 D PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr1331 probable transcriptional regulator; AraC family transcriptional regulator 3062419..3063447 Roseiflexus castenholzii DSM 13941 5539857 YP_001432477.1 CDS Rcas_2377 NC_009767.1 3063554 3066370 D PFAM: phosphoenolpyruvate carboxylase; KEGG: rrs:RoseRS_2753 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 3063554..3066370 Roseiflexus castenholzii DSM 13941 5539858 YP_001432478.1 CDS Rcas_2378 NC_009767.1 3066379 3067011 R KEGG: rrs:RoseRS_2754 hypothetical protein; hypothetical protein complement(3066379..3067011) Roseiflexus castenholzii DSM 13941 5539859 YP_001432479.1 CDS Rcas_2379 NC_009767.1 3067343 3069370 D PFAM: VanW family protein; KEGG: rrs:RoseRS_2755 VanW family protein; von Willebrand factor A 3067343..3069370 Roseiflexus castenholzii DSM 13941 5539860 YP_001432480.1 CDS Rcas_2380 NC_009767.1 3069420 3069965 R KEGG: rrs:RoseRS_2756 hypothetical protein; hypothetical protein complement(3069420..3069965) Roseiflexus castenholzii DSM 13941 5539861 YP_001432481.1 CDS Rcas_2381 NC_009767.1 3070217 3070684 D KEGG: rrs:RoseRS_2757 hypothetical protein; hypothetical protein 3070217..3070684 Roseiflexus castenholzii DSM 13941 5539862 YP_001432482.1 CDS Rcas_2382 NC_009767.1 3070697 3071365 D PFAM: Endonuclease V; KEGG: rrs:RoseRS_2758 deoxyribonuclease V; deoxyribonuclease V 3070697..3071365 Roseiflexus castenholzii DSM 13941 5539863 YP_001432483.1 CDS Rcas_2383 NC_009767.1 3071713 3072366 D hypothetical protein 3071713..3072366 Roseiflexus castenholzii DSM 13941 5539864 YP_001432484.1 CDS Rcas_2384 NC_009767.1 3072445 3072876 D KEGG: rrs:RoseRS_2759 hypothetical protein; hypothetical protein 3072445..3072876 Roseiflexus castenholzii DSM 13941 5539865 YP_001432485.1 CDS Rcas_2385 NC_009767.1 3073093 3073764 R PFAM: protein of unknown function DUF192; KEGG: rrs:RoseRS_2760 protein of unknown function DUF192; hypothetical protein complement(3073093..3073764) Roseiflexus castenholzii DSM 13941 5539866 YP_001432486.1 CDS Rcas_2386 NC_009767.1 3073770 3075209 R TIGRFAM: Acyltransferase WS/DGAT/MGAT family protein; PFAM: protein of unknown function UPF0089; KEGG: rrs:RoseRS_2761 protein of unknown function UPF0089; acyltransferase complement(3073770..3075209) Roseiflexus castenholzii DSM 13941 5539867 YP_001432487.1 CDS Rcas_2387 NC_009767.1 3075360 3075734 D hypothetical protein 3075360..3075734 Roseiflexus castenholzii DSM 13941 5539868 YP_001432488.1 CDS Rcas_2388 NC_009767.1 3076177 3077223 R PFAM: NMT1/THI5 like domain protein; KEGG: rrs:RoseRS_2762 membrane lipoprotein lipid attachment site; NMT1/THI5-like domain-containing protein complement(3076177..3077223) Roseiflexus castenholzii DSM 13941 5539869 YP_001432489.1 CDS Rcas_2389 NC_009767.1 3077223 3078050 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2763 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3077223..3078050) Roseiflexus castenholzii DSM 13941 5539870 YP_001432490.1 CDS Rcas_2390 NC_009767.1 3078516 3079562 R PFAM: ROK family protein; KEGG: rrs:RoseRS_2764 ROK family protein; ROK family protein complement(3078516..3079562) Roseiflexus castenholzii DSM 13941 5539871 YP_001432491.1 CDS Rcas_2391 NC_009767.1 3079731 3080999 D PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2765 protein phosphatase 2C domain protein; Ser/Thr phosphatase 3079731..3080999 Roseiflexus castenholzii DSM 13941 5539872 YP_001432492.1 CDS Rcas_2392 NC_009767.1 3081040 3082833 D PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2766 protein phosphatase 2C domain protein; Ser/Thr phosphatase 3081040..3082833 Roseiflexus castenholzii DSM 13941 5539873 YP_001432493.1 CDS Rcas_2393 NC_009767.1 3082835 3084208 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2767 protein kinase; serine/threonine protein kinase 3082835..3084208 Roseiflexus castenholzii DSM 13941 5539874 YP_001432494.1 CDS Rcas_2394 NC_009767.1 3084284 3085522 D PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2768 von Willebrand factor, type A; von Willebrand factor A 3084284..3085522 Roseiflexus castenholzii DSM 13941 5539875 YP_001432495.1 CDS Rcas_2395 NC_009767.1 3085550 3087067 D PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2769 FHA domain containing protein; FHA domain-containing protein 3085550..3087067 Roseiflexus castenholzii DSM 13941 5539876 YP_001432496.1 CDS Rcas_2397 NC_009767.1 3088442 3089275 R KEGG: rrs:RoseRS_2772 TIM-barrel enzyme possibly a dioxygenase-like protein; hypothetical protein complement(3088442..3089275) Roseiflexus castenholzii DSM 13941 5539878 YP_001432497.1 CDS Rcas_2398 NC_009767.1 3089277 3090512 R PFAM: protein of unknown function UPF0261; KEGG: rrs:RoseRS_2773 protein of unknown function UPF0261; hypothetical protein complement(3089277..3090512) Roseiflexus castenholzii DSM 13941 5539879 YP_001432498.1 CDS Rcas_2399 NC_009767.1 3090543 3090947 R KEGG: rrs:RoseRS_2774 hypothetical protein; hypothetical protein complement(3090543..3090947) Roseiflexus castenholzii DSM 13941 5539880 YP_001432499.1 CDS Rcas_2400 NC_009767.1 3091029 3092426 R KEGG: rrs:RoseRS_2775 hypothetical protein; hypothetical protein complement(3091029..3092426) Roseiflexus castenholzii DSM 13941 5539881 YP_001432500.1 CDS Rcas_2401 NC_009767.1 3092677 3093765 R TIGRFAM: polymorphic outer membrane protein; SMART: Parallel beta-helix repeat; KEGG: rba:RB4375 probable extracellular nuclease; polymorphic outer membrane protein complement(3092677..3093765) Roseiflexus castenholzii DSM 13941 5539882 YP_001432501.1 CDS Rcas_2403 NC_009767.1 3097145 3097669 R PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_2580 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(3097145..3097669) Roseiflexus castenholzii DSM 13941 5539884 YP_001432502.1 CDS Rcas_2404 NC_009767.1 3098584 3098784 R KEGG: rrs:RoseRS_2579 hypothetical protein; hypothetical protein complement(3098584..3098784) Roseiflexus castenholzii DSM 13941 5539885 YP_001432503.1 CDS Rcas_2405 NC_009767.1 3098798 3099601 R PFAM: Hydratase/decarboxylase; KEGG: rrs:RoseRS_2578 4-oxalocrotonate decarboxylase; 4-oxalocrotonate decarboxylase complement(3098798..3099601) Roseiflexus castenholzii DSM 13941 5539886 YP_001432504.1 CDS Rcas_2406 NC_009767.1 3099583 3101037 R PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_2577 aldehyde dehydrogenase; aldehyde dehydrogenase complement(3099583..3101037) Roseiflexus castenholzii DSM 13941 5539887 YP_001432505.1 CDS Rcas_2407 NC_009767.1 3101037 3101771 R PFAM: Hydratase/decarboxylase; KEGG: rrs:RoseRS_2576 hydratase/decarboxylase; hydratase/decarboxylase complement(3101037..3101771) Roseiflexus castenholzii DSM 13941 5539888 YP_001432506.1 CDS Rcas_2408 NC_009767.1 3101755 3101967 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: rrs:RoseRS_2575 4-oxalocrotonate tautomerase family enzyme; 4-oxalocrotonate tautomerase complement(3101755..3101967) Roseiflexus castenholzii DSM 13941 5539889 YP_001432507.1 CDS Rcas_2409 NC_009767.1 3101980 3102525 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rrs:RoseRS_2574 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein complement(3101980..3102525) Roseiflexus castenholzii DSM 13941 5539890 YP_001432508.1 CDS Rcas_2410 NC_009767.1 3103018 3104028 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(3103018..3104028) Roseiflexus castenholzii DSM 13941 5539891 YP_001432509.1 CDS Rcas_2411 NC_009767.1 3104025 3104942 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(3104025..3104942) Roseiflexus castenholzii DSM 13941 5539892 YP_001432510.1 CDS Rcas_2412 NC_009767.1 3104924 3105700 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: rrs:RoseRS_2571 regulatory protein, IclR; IclR family transcriptional regulator complement(3104924..3105700) Roseiflexus castenholzii DSM 13941 5539893 YP_001432511.1 CDS Rcas_2413 NC_009767.1 3106211 3107218 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2570 catechol 2,3-dioxygenase; catechol 2,3-dioxygenase complement(3106211..3107218) Roseiflexus castenholzii DSM 13941 5539894 YP_001432512.1 CDS Rcas_2414 NC_009767.1 3107245 3108810 R PFAM: 4-hydroxyphenylacetate 3-hydroxylase; KEGG: rrs:RoseRS_2569 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-hydroxylase complement(3107245..3108810) Roseiflexus castenholzii DSM 13941 5539895 YP_001432513.1 CDS Rcas_2415 NC_009767.1 3108854 3109150 R hypothetical protein complement(3108854..3109150) Roseiflexus castenholzii DSM 13941 5539896 YP_001432514.1 CDS Rcas_2416 NC_009767.1 3109254 3109565 D PFAM: DNA polymerase beta domain protein region; KEGG: gme:Gmet_0479 DNA polymerase, beta-like region; DNA polymerase subunit beta 3109254..3109565 Roseiflexus castenholzii DSM 13941 5539897 YP_001432515.1 CDS Rcas_2417 NC_009767.1 3109546 3109920 D PFAM: protein of unknown function DUF86; KEGG: syf:Synpcc7942_0275 hypothetical protein; hypothetical protein 3109546..3109920 Roseiflexus castenholzii DSM 13941 5539898 YP_001432516.1 CDS Rcas_2418 NC_009767.1 3109947 3111056 D KEGG: rrs:RoseRS_2567 hypothetical protein; hypothetical protein 3109947..3111056 Roseiflexus castenholzii DSM 13941 5539899 YP_001432517.1 CDS Rcas_2419 NC_009767.1 3111121 3112695 R hypothetical protein complement(3111121..3112695) Roseiflexus castenholzii DSM 13941 5539900 YP_001432518.1 CDS Rcas_2420 NC_009767.1 3113063 3114172 R KEGG: rrs:RoseRS_2812 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3113063..3114172) Roseiflexus castenholzii DSM 13941 5539901 YP_001432519.1 CDS Rcas_2421 NC_009767.1 3114182 3115231 R KEGG: rrs:RoseRS_2811 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3114182..3115231) Roseiflexus castenholzii DSM 13941 5539902 YP_001432520.1 CDS Rcas_2422 NC_009767.1 3115244 3116371 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2810 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3115244..3116371) Roseiflexus castenholzii DSM 13941 5539903 YP_001432521.1 CDS Rcas_2423 NC_009767.1 3116417 3117400 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2809 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3116417..3117400) Roseiflexus castenholzii DSM 13941 5539904 YP_001432522.1 CDS Rcas_2424 NC_009767.1 3117599 3119785 R PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_2808 extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(3117599..3119785) Roseiflexus castenholzii DSM 13941 5539905 YP_001432523.1 CDS Rcas_2425 NC_009767.1 3121155 3121574 R KEGG: rrs:RoseRS_2806 hypothetical protein; hypothetical protein complement(3121155..3121574) Roseiflexus castenholzii DSM 13941 5539906 YP_001432524.1 CDS Rcas_2426 NC_009767.1 3121608 3122039 R KEGG: rrs:RoseRS_2807 hypothetical protein; hypothetical protein complement(3121608..3122039) Roseiflexus castenholzii DSM 13941 5539907 YP_001432525.1 CDS Rcas_2427 NC_009767.1 3122132 3122749 R KEGG: rrs:RoseRS_2805 hypothetical protein; hypothetical protein complement(3122132..3122749) Roseiflexus castenholzii DSM 13941 5539908 YP_001432526.1 CDS Rcas_2428 NC_009767.1 3123073 3123267 D TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 3123073..3123267 Roseiflexus castenholzii DSM 13941 5539909 YP_001432527.1 CDS prfA NC_009767.1 3123367 3124461 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3123367..3124461 Roseiflexus castenholzii DSM 13941 5539910 YP_001432528.1 CDS Rcas_2430 NC_009767.1 3124812 3125912 D KEGG: rrs:RoseRS_2867 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase 3124812..3125912 Roseiflexus castenholzii DSM 13941 5539911 YP_001432529.1 CDS Rcas_2431 NC_009767.1 3125935 3126435 R KEGG: rrs:RoseRS_2866 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(3125935..3126435) Roseiflexus castenholzii DSM 13941 5539912 YP_001432530.1 CDS Rcas_2432 NC_009767.1 3126553 3126990 D PFAM: cyclase/dehydrase; KEGG: rrs:RoseRS_2865 cyclase/dehydrase; cyclase/dehydrase 3126553..3126990 Roseiflexus castenholzii DSM 13941 5539913 YP_001432531.1 CDS Rcas_2433 NC_009767.1 3126996 3127550 D PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_2864 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 3126996..3127550 Roseiflexus castenholzii DSM 13941 5539914 YP_001432532.1 CDS pyrB NC_009767.1 3127561 3128517 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 3127561..3128517 Roseiflexus castenholzii DSM 13941 5539915 YP_001432533.1 CDS Rcas_2435 NC_009767.1 3128529 3130022 D KEGG: rrs:RoseRS_2862 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; dihydroorotase, multifunctional complex type 3128529..3130022 Roseiflexus castenholzii DSM 13941 5539916 YP_001432534.1 CDS Rcas_2436 NC_009767.1 3130022 3130813 D KEGG: rrs:RoseRS_2861 hypothetical protein; hypothetical protein 3130022..3130813 Roseiflexus castenholzii DSM 13941 5539917 YP_001432535.1 CDS Rcas_2437 NC_009767.1 3131731 3132834 D PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_2860 dihydroorotate oxidase; dihydroorotate oxidase 3131731..3132834 Roseiflexus castenholzii DSM 13941 5539918 YP_001432536.1 CDS Rcas_2438 NC_009767.1 3133138 3134250 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2859 mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; mandelate racemase/muconate lactonizing protein complement(3133138..3134250) Roseiflexus castenholzii DSM 13941 5539919 YP_001432537.1 CDS Rcas_2439 NC_009767.1 3134247 3135098 R KEGG: rrs:RoseRS_2858 hypothetical protein; hypothetical protein complement(3134247..3135098) Roseiflexus castenholzii DSM 13941 5539920 YP_001432538.1 CDS Rcas_2440 NC_009767.1 3135099 3135962 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2857 alpha/beta hydrolase fold; alpha/beta hydrolase complement(3135099..3135962) Roseiflexus castenholzii DSM 13941 5539921 YP_001432539.1 CDS Rcas_2441 NC_009767.1 3136108 3137193 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rle:pRL90296 GFO/IDH/MocA oxidoreductase; oxidoreductase domain-containing protein complement(3136108..3137193) Roseiflexus castenholzii DSM 13941 5539922 YP_001432540.1 CDS Rcas_2442 NC_009767.1 3137211 3138239 R PFAM: oxidoreductase domain protein; KEGG: sme:SMc04138 oxidoreductase; oxidoreductase domain-containing protein complement(3137211..3138239) Roseiflexus castenholzii DSM 13941 5539923 YP_001432541.1 CDS Rcas_2443 NC_009767.1 3138256 3138591 R hypothetical protein complement(3138256..3138591) Roseiflexus castenholzii DSM 13941 5539924 YP_001432542.1 CDS Rcas_2444 NC_009767.1 3138601 3140886 R KEGG: aor:AO090124000067 predicted protein; hypothetical protein complement(3138601..3140886) Roseiflexus castenholzii DSM 13941 5539925 YP_001432543.1 CDS Rcas_2445 NC_009767.1 3140905 3141495 R hypothetical protein complement(3140905..3141495) Roseiflexus castenholzii DSM 13941 5539926 YP_001432544.1 CDS Rcas_2446 NC_009767.1 3141510 3144122 R KEGG: sen:SACE_4832 hypothetical protein; hypothetical protein complement(3141510..3144122) Roseiflexus castenholzii DSM 13941 5539927 YP_001432545.1 CDS Rcas_2447 NC_009767.1 3144125 3144880 R PFAM: Cupin 2 conserved barrel domain protein; KEGG: aau:AAur_pTC20129 cupin domain protein; cupin complement(3144125..3144880) Roseiflexus castenholzii DSM 13941 5539928 YP_001432546.1 CDS Rcas_2448 NC_009767.1 3144944 3146119 R KEGG: ent:Ent638_3297 oligogalacturonide lyase; hypothetical protein complement(3144944..3146119) Roseiflexus castenholzii DSM 13941 5539929 YP_001432547.1 CDS Rcas_2449 NC_009767.1 3146131 3147492 R PFAM: glycoside hydrolase family 4; KEGG: tpt:Tpet_0970 glycoside hydrolase, family 4; glycoside hydrolase family protein complement(3146131..3147492) Roseiflexus castenholzii DSM 13941 5539930 YP_001432548.1 CDS Rcas_2450 NC_009767.1 3147562 3149334 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: deh:cbdb_A1620 radical SAM/B12 binding domain protein; radical SAM domain-containing protein complement(3147562..3149334) Roseiflexus castenholzii DSM 13941 5539931 YP_001432549.1 CDS Rcas_2451 NC_009767.1 3149363 3150493 R KEGG: rrs:RoseRS_2811 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3149363..3150493) Roseiflexus castenholzii DSM 13941 5539932 YP_001432550.1 CDS Rcas_2452 NC_009767.1 3150468 3151631 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_0865 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3150468..3151631) Roseiflexus castenholzii DSM 13941 5539933 YP_001432551.1 CDS Rcas_2453 NC_009767.1 3151635 3152624 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tpt:Tpet_1683 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component complement(3151635..3152624) Roseiflexus castenholzii DSM 13941 5539934 YP_001432552.1 CDS Rcas_2454 NC_009767.1 3152757 3154805 R PFAM: extracellular solute-binding protein family 5; KEGG: tpt:Tpet_1687 extracellular solute-binding protein, family 5; extracellular solute-binding protein complement(3152757..3154805) Roseiflexus castenholzii DSM 13941 5539935 YP_001432553.1 CDS Rcas_2455 NC_009767.1 3154966 3156015 R KEGG: rrs:RoseRS_2812 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(3154966..3156015) Roseiflexus castenholzii DSM 13941 5539936 YP_001432554.1 CDS Rcas_2456 NC_009767.1 3156193 3157251 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: rrs:RoseRS_2856 periplasmic binding protein/LacI transcriptional regulator; LacI family transcriptional regulator 3156193..3157251 Roseiflexus castenholzii DSM 13941 5539937 YP_001432555.1 CDS Rcas_2457 NC_009767.1 3157339 3158490 D PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_2855 oxidoreductase domain protein; oxidoreductase domain-containing protein 3157339..3158490 Roseiflexus castenholzii DSM 13941 5539938 YP_001432556.1 CDS Rcas_2458 NC_009767.1 3158506 3159672 D PFAM: protein of unknown function DUF993; KEGG: rrs:RoseRS_2854 protein of unknown function DUF993; hypothetical protein 3158506..3159672 Roseiflexus castenholzii DSM 13941 5539939 YP_001432557.1 CDS Rcas_2459 NC_009767.1 3159676 3160554 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_2853 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3159676..3160554 Roseiflexus castenholzii DSM 13941 5539940 YP_001432558.1 CDS Rcas_2460 NC_009767.1 3160762 3161682 D TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_2851 PAS/PAC sensor protein; PAS/PAC sensor protein 3160762..3161682 Roseiflexus castenholzii DSM 13941 5539941 YP_001432559.1 CDS Rcas_2461 NC_009767.1 3161679 3162824 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2850 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 3161679..3162824 Roseiflexus castenholzii DSM 13941 5539942 YP_001432560.1 CDS Rcas_2462 NC_009767.1 3162920 3163216 D PFAM: DNA polymerase beta domain protein region; KEGG: ttj:TTHA1512 nucleotidyltransferase; DNA polymerase subunit beta 3162920..3163216 Roseiflexus castenholzii DSM 13941 5539943 YP_001432561.1 CDS Rcas_2463 NC_009767.1 3163295 3163531 D PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_3558 protein of unknown function DUF86; hypothetical protein 3163295..3163531 Roseiflexus castenholzii DSM 13941 5539944 YP_001432562.1 CDS Rcas_2464 NC_009767.1 3163572 3164615 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2849 oxidoreductase domain protein; oxidoreductase domain-containing protein 3163572..3164615 Roseiflexus castenholzii DSM 13941 5539945 YP_001432563.1 CDS Rcas_2465 NC_009767.1 3164612 3165046 D KEGG: rrs:RoseRS_2848 hypothetical protein; hypothetical protein 3164612..3165046 Roseiflexus castenholzii DSM 13941 5539946 YP_001432564.1 CDS Rcas_2466 NC_009767.1 3165037 3167655 D PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: rrs:RoseRS_2847 polynucleotide adenylyltransferase region; polynucleotide adenylyltransferase 3165037..3167655 Roseiflexus castenholzii DSM 13941 5539947 YP_001432565.1 CDS Rcas_2467 NC_009767.1 3167709 3169028 R KEGG: rrs:RoseRS_2846 Rossmann fold nucleotide-binding protein involved in DNA uptake-like protein; DNA uptake Rossmann fold nucleotide-binding protein complement(3167709..3169028) Roseiflexus castenholzii DSM 13941 5539948 YP_001432566.1 CDS Rcas_2468 NC_009767.1 3169040 3171166 R KEGG: ana:alr3451 ATP-dependent DNA helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ complement(3169040..3171166) Roseiflexus castenholzii DSM 13941 5539949 YP_001432567.1 CDS Rcas_2469 NC_009767.1 3171315 3173282 R KEGG: rrs:RoseRS_2844 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(3171315..3173282) Roseiflexus castenholzii DSM 13941 5539950 YP_001432568.1 CDS Rcas_2470 NC_009767.1 3173335 3175605 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_2842 diguanylate cyclase; GAF sensor-containing diguanylate cyclase complement(3173335..3175605) Roseiflexus castenholzii DSM 13941 5539951 YP_001432569.1 CDS Rcas_2471 NC_009767.1 3175840 3178170 D KEGG: rrs:RoseRS_1099 glycosyl transferase, family 39; hypothetical protein 3175840..3178170 Roseiflexus castenholzii DSM 13941 5539952 YP_001432570.1 CDS Rcas_2472 NC_009767.1 3178177 3179436 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2841 glycosyl transferase, group 1; group 1 glycosyl transferase 3178177..3179436 Roseiflexus castenholzii DSM 13941 5539953 YP_001432571.1 CDS Rcas_2473 NC_009767.1 3179441 3180652 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2840 glycosyl transferase, group 1; group 1 glycosyl transferase 3179441..3180652 Roseiflexus castenholzii DSM 13941 5539954 YP_001432572.1 CDS Rcas_2474 NC_009767.1 3181924 3183510 R PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_2839 Orn/DAP/Arg decarboxylase 2; Orn/DAP/Arg decarboxylase 2 complement(3181924..3183510) Roseiflexus castenholzii DSM 13941 5539955 YP_001432573.1 CDS Rcas_2475 NC_009767.1 3183623 3183877 R hypothetical protein complement(3183623..3183877) Roseiflexus castenholzii DSM 13941 5539956 YP_001432574.1 CDS Rcas_2476 NC_009767.1 3184111 3185577 R PFAM: glycosyl transferase group 1; Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_2527 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase complement(3184111..3185577) Roseiflexus castenholzii DSM 13941 5539957 YP_001432575.1 CDS Rcas_2477 NC_009767.1 3186249 3187400 R KEGG: rrs:RoseRS_0181 ATPase (AAA+ superfamily)-like protein; ATPase AAA complement(3186249..3187400) Roseiflexus castenholzii DSM 13941 5539958 YP_001432576.1 CDS Rcas_2478 NC_009767.1 3187446 3190577 R KEGG: rrs:RoseRS_2542 hypothetical protein; hypothetical protein complement(3187446..3190577) Roseiflexus castenholzii DSM 13941 5539959 YP_001432577.1 CDS Rcas_2479 NC_009767.1 3191174 3192106 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3191174..3192106 Roseiflexus castenholzii DSM 13941 5539960 YP_001432578.1 CDS Rcas_2480 NC_009767.1 3192109 3193266 D TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: rrs:RoseRS_2545 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 3192109..3193266 Roseiflexus castenholzii DSM 13941 5539961 YP_001432579.1 CDS Rcas_2481 NC_009767.1 3193275 3193892 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0685 protein of unknown function DUF820; hypothetical protein complement(3193275..3193892) Roseiflexus castenholzii DSM 13941 5539962 YP_001432580.1 CDS Rcas_2482 NC_009767.1 3194339 3197008 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 3194339..3197008 Roseiflexus castenholzii DSM 13941 5539963 YP_001432581.1 CDS Rcas_2483 NC_009767.1 3197790 3199034 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1065 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3197790..3199034) Roseiflexus castenholzii DSM 13941 5539964 YP_001432582.1 CDS Rcas_2484 NC_009767.1 3199448 3200632 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1066 major facilitator superfamily MFS_1; major facilitator transporter 3199448..3200632 Roseiflexus castenholzii DSM 13941 5539965 YP_001432583.1 CDS Rcas_2485 NC_009767.1 3201011 3202318 R PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_2291 protein of unknown function UPF0118; hypothetical protein complement(3201011..3202318) Roseiflexus castenholzii DSM 13941 5539966 YP_001432584.1 CDS Rcas_2486 NC_009767.1 3202404 3203330 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rrs:RoseRS_2633 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3202404..3203330 Roseiflexus castenholzii DSM 13941 5539967 YP_001432585.1 CDS Rcas_2487 NC_009767.1 3203343 3204017 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2290 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(3203343..3204017) Roseiflexus castenholzii DSM 13941 5539968 YP_001432586.1 CDS Rcas_2488 NC_009767.1 3204124 3204879 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2289 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3204124..3204879 Roseiflexus castenholzii DSM 13941 5539969 YP_001432587.1 CDS Rcas_2489 NC_009767.1 3204959 3206020 D PFAM: peptidase M23B; SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_2287 peptidase M23B; XRE family transcriptional regulator 3204959..3206020 Roseiflexus castenholzii DSM 13941 5539970 YP_001432588.1 CDS Rcas_2490 NC_009767.1 3206250 3207671 D PFAM: amino acid-binding ACT domain protein; malic protein domain protein; malic protein NAD-binding; KEGG: rrs:RoseRS_2286 malate dehydrogenase (oxaloacetate-decarboxylating); malate dehydrogenase 3206250..3207671 Roseiflexus castenholzii DSM 13941 5539971 YP_001432589.1 CDS Rcas_2491 NC_009767.1 3207974 3209605 R KEGG: rrs:RoseRS_2713 hypothetical protein; hypothetical protein complement(3207974..3209605) Roseiflexus castenholzii DSM 13941 5539972 YP_001432590.1 CDS Rcas_2492 NC_009767.1 3209914 3210561 D KEGG: rrs:RoseRS_4171 flavodoxin-like protein; flavodoxin-like protein 3209914..3210561 Roseiflexus castenholzii DSM 13941 5539973 YP_001432591.1 CDS Rcas_2493 NC_009767.1 3210643 3213774 R PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_2714 beta-galactosidase; beta-galactosidase complement(3210643..3213774) Roseiflexus castenholzii DSM 13941 5539974 YP_001432592.1 CDS Rcas_2494 NC_009767.1 3213973 3215403 R PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rrs:RoseRS_2715 glutamine synthetase, catalytic region; glutamine synthetase complement(3213973..3215403) Roseiflexus castenholzii DSM 13941 5539975 YP_001432593.1 CDS Rcas_2495 NC_009767.1 3215749 3217455 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_2716 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3215749..3217455 Roseiflexus castenholzii DSM 13941 5539976 YP_001432594.1 CDS Rcas_2496 NC_009767.1 3217665 3218819 D KEGG: ava:Ava_2329 hypothetical protein; hypothetical protein 3217665..3218819 Roseiflexus castenholzii DSM 13941 5539977 YP_001432595.1 CDS Rcas_2497 NC_009767.1 3219035 3220879 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2717 ABC transporter related; ABC transporter-like protein complement(3219035..3220879) Roseiflexus castenholzii DSM 13941 5539978 YP_001432596.1 CDS Rcas_2498 NC_009767.1 3220876 3221349 R KEGG: rrs:RoseRS_2718 hypothetical protein; hypothetical protein complement(3220876..3221349) Roseiflexus castenholzii DSM 13941 5539979 YP_001432597.1 CDS Rcas_2499 NC_009767.1 3221406 3223211 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2719 ABC transporter related; ABC transporter transmembrane region complement(3221406..3223211) Roseiflexus castenholzii DSM 13941 5539980 YP_001432598.1 CDS Rcas_2500 NC_009767.1 3223208 3223609 R PFAM: regulatory protein MarR; KEGG: rrs:RoseRS_2720 transcriptional regulator, MarR family; MarR family transcriptional regulator complement(3223208..3223609) Roseiflexus castenholzii DSM 13941 5539981 YP_001432599.1 CDS Rcas_2501 NC_009767.1 3224019 3224309 D PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rrs:RoseRS_1842 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3224019..3224309 Roseiflexus castenholzii DSM 13941 5539982 YP_001432600.1 CDS Rcas_2502 NC_009767.1 3224466 3226064 R KEGG: rrs:RoseRS_1841 hypothetical protein; hypothetical protein complement(3224466..3226064) Roseiflexus castenholzii DSM 13941 5539984 YP_001432601.1 CDS Rcas_2503 NC_009767.1 3226382 3228805 R KEGG: rrs:RoseRS_1840 hypothetical protein; hypothetical protein complement(3226382..3228805) Roseiflexus castenholzii DSM 13941 5539985 YP_001432602.1 CDS Rcas_2504 NC_009767.1 3228872 3229639 R KEGG: rrs:RoseRS_1839 hypothetical protein; hypothetical protein complement(3228872..3229639) Roseiflexus castenholzii DSM 13941 5539986 YP_001432603.1 CDS Rcas_2505 NC_009767.1 3229896 3232202 R KEGG: mxa:MXAN_5387 hypothetical protein; hypothetical protein complement(3229896..3232202) Roseiflexus castenholzii DSM 13941 5539987 YP_001432604.1 CDS Rcas_2506 NC_009767.1 3232268 3234394 R KEGG: rrs:RoseRS_1838 hypothetical protein; hypothetical protein complement(3232268..3234394) Roseiflexus castenholzii DSM 13941 5539988 YP_001432605.1 CDS Rcas_2507 NC_009767.1 3234400 3235218 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1837 methyltransferase type 12; type 12 methyltransferase complement(3234400..3235218) Roseiflexus castenholzii DSM 13941 5539989 YP_001432606.1 CDS Rcas_2508 NC_009767.1 3235482 3236804 R PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_1836 protein of unknown function DUF58; hypothetical protein complement(3235482..3236804) Roseiflexus castenholzii DSM 13941 5539990 YP_001432607.1 CDS Rcas_2509 NC_009767.1 3237675 3238622 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1835 ATPase associated with various cellular activities, AAA_3; ATPase complement(3237675..3238622) Roseiflexus castenholzii DSM 13941 5539991 YP_001432608.1 CDS Rcas_2510 NC_009767.1 3238682 3239626 R KEGG: rrs:RoseRS_1834 hypothetical protein; hypothetical protein complement(3238682..3239626) Roseiflexus castenholzii DSM 13941 5539992 YP_001432609.1 CDS Rcas_2511 NC_009767.1 3239648 3240811 R KEGG: rrs:RoseRS_1833 hypothetical protein; hypothetical protein complement(3239648..3240811) Roseiflexus castenholzii DSM 13941 5539993 YP_001432610.1 CDS Rcas_2512 NC_009767.1 3240808 3241794 R KEGG: rrs:RoseRS_1832 hypothetical protein; hypothetical protein complement(3240808..3241794) Roseiflexus castenholzii DSM 13941 5539994 YP_001432611.1 CDS Rcas_2513 NC_009767.1 3242225 3243382 D PFAM: phosphofructokinase; KEGG: rrs:RoseRS_1831 6-phosphofructokinase; 6-phosphofructokinase 3242225..3243382 Roseiflexus castenholzii DSM 13941 5539995 YP_001432612.1 CDS Rcas_2514 NC_009767.1 3243395 3244435 D catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in Streptococcus pyogenes there are two paralogs of tagatose-bisphosphate aldolase, encoded by lacD1 and lacD2; expression of lacD1 is highly regulated by environmental conditions while lacD2 specializes in an efficient utilization of carbohydrate sources; tagatose 1,6-diphosphate aldolase 3243395..3244435 Roseiflexus castenholzii DSM 13941 5539996 YP_001432613.1 CDS Rcas_2515 NC_009767.1 3244679 3245797 D PFAM: phosphofructokinase; KEGG: rrs:RoseRS_1829 6-phosphofructokinase; 6-phosphofructokinase 3244679..3245797 Roseiflexus castenholzii DSM 13941 5539997 YP_001432614.1 CDS Rcas_2516 NC_009767.1 3245835 3247172 R KEGG: rrs:RoseRS_1828 glycogen debranching enzyme-like protein; glycogen debranching enzyme-like protein complement(3245835..3247172) Roseiflexus castenholzii DSM 13941 5539998 YP_001432615.1 CDS Rcas_2517 NC_009767.1 3247318 3247692 D KEGG: rrs:RoseRS_1827 hypothetical protein; hypothetical protein 3247318..3247692 Roseiflexus castenholzii DSM 13941 5539999 YP_001432616.1 CDS Rcas_2518 NC_009767.1 3247714 3249108 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_1826 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein 3247714..3249108 Roseiflexus castenholzii DSM 13941 5540000 YP_001432617.1 CDS Rcas_2519 NC_009767.1 3249795 3250526 D PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_1825 alpha/beta hydrolase fold; alpha/beta hydrolase 3249795..3250526 Roseiflexus castenholzii DSM 13941 5540001 YP_001432618.1 CDS Rcas_2520 NC_009767.1 3250523 3251887 D TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: ttj:TTHA1060 Mg2+ transporter MgtE; magnesium transporter 3250523..3251887 Roseiflexus castenholzii DSM 13941 5540002 YP_001432619.1 CDS Rcas_2521 NC_009767.1 3252091 3254931 D PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1823 FHA domain containing protein; FHA domain-containing protein 3252091..3254931 Roseiflexus castenholzii DSM 13941 5540003 YP_001432620.1 CDS Rcas_2522 NC_009767.1 3255228 3255689 D KEGG: rrs:RoseRS_2555 hypothetical protein; hypothetical protein 3255228..3255689 Roseiflexus castenholzii DSM 13941 5540004 YP_001432621.1 CDS Rcas_2523 NC_009767.1 3255724 3256482 D PFAM: peptidase C26; KEGG: rrs:RoseRS_1822 peptidase C26; peptidase C26 3255724..3256482 Roseiflexus castenholzii DSM 13941 5540005 YP_001432622.1 CDS Rcas_2524 NC_009767.1 3256770 3257267 D KEGG: rrs:RoseRS_1821 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3256770..3257267 Roseiflexus castenholzii DSM 13941 5540006 YP_001432623.1 CDS Rcas_2525 NC_009767.1 3257264 3258391 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3257264..3258391 Roseiflexus castenholzii DSM 13941 5540007 YP_001432624.1 CDS Rcas_2526 NC_009767.1 3258524 3260209 D KEGG: rrs:RoseRS_1819 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type 3258524..3260209 Roseiflexus castenholzii DSM 13941 5540008 YP_001432625.1 CDS Rcas_2527 NC_009767.1 3260283 3261164 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rrs:RoseRS_1818 thioredoxin; thioredoxin 3260283..3261164 Roseiflexus castenholzii DSM 13941 5540009 YP_001432626.1 CDS Rcas_2528 NC_009767.1 3261406 3262059 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1817 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3261406..3262059 Roseiflexus castenholzii DSM 13941 5540010 YP_001432627.1 CDS Rcas_2529 NC_009767.1 3262077 3263027 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: rrs:RoseRS_1816 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 3262077..3263027 Roseiflexus castenholzii DSM 13941 5540011 YP_001432628.1 CDS Rcas_2530 NC_009767.1 3263032 3264012 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1815 ABC transporter related; ABC transporter-like protein 3263032..3264012 Roseiflexus castenholzii DSM 13941 5540012 YP_001432629.1 CDS Rcas_2531 NC_009767.1 3263996 3264637 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1814 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3263996..3264637 Roseiflexus castenholzii DSM 13941 5540013 YP_001432630.1 CDS Rcas_2533 NC_009767.1 3265323 3266507 D PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1813 alpha/beta hydrolase fold; alpha/beta hydrolase 3265323..3266507 Roseiflexus castenholzii DSM 13941 5540015 YP_001432631.1 CDS Rcas_2534 NC_009767.1 3266874 3268412 R KEGG: rrs:RoseRS_1812 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; glycosyltransferase complement(3266874..3268412) Roseiflexus castenholzii DSM 13941 5540016 YP_001432632.1 CDS Rcas_2535 NC_009767.1 3269858 3271333 D TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1811 phytoene dehydrogenase-related protein; zeta-phytoene desaturase 3269858..3271333 Roseiflexus castenholzii DSM 13941 5540017 YP_001432633.1 CDS Rcas_2536 NC_009767.1 3271810 3272559 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1807 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(3271810..3272559) Roseiflexus castenholzii DSM 13941 5540018 YP_001432634.1 CDS Rcas_2537 NC_009767.1 3272826 3275207 R PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_1075 protein of unknown function DUF214; hypothetical protein complement(3272826..3275207) Roseiflexus castenholzii DSM 13941 5540019 YP_001432635.1 CDS Rcas_2538 NC_009767.1 3275358 3277439 R PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: rrs:RoseRS_2826 TAP domain protein; TAP domain-containing protein complement(3275358..3277439) Roseiflexus castenholzii DSM 13941 5540020 YP_001432636.1 CDS Rcas_2539 NC_009767.1 3277577 3278935 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_2827 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3277577..3278935 Roseiflexus castenholzii DSM 13941 5540021 YP_001432637.1 CDS Rcas_2540 NC_009767.1 3279012 3280838 R KEGG: rrs:RoseRS_2823 magnesium chelatase ATPase subunit D; TIGRFAM: magnesium chelatase ATPase subunit D; PFAM: von Willebrand factor type A; ATPase associated with various cellular activities AAA_5; magnesium chelatase ATPase subunit D complement(3279012..3280838) Roseiflexus castenholzii DSM 13941 5540022 YP_001432638.1 CDS Rcas_2541 NC_009767.1 3280838 3281581 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2822 FHA domain containing protein; FHA domain-containing protein complement(3280838..3281581) Roseiflexus castenholzii DSM 13941 5540023 YP_001432639.1 CDS Rcas_2542 NC_009767.1 3281782 3282303 D hypothetical protein 3281782..3282303 Roseiflexus castenholzii DSM 13941 5540024 YP_001432640.1 CDS Rcas_2543 NC_009767.1 3282665 3283741 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: rrs:RoseRS_2821 ParB-like partition protein; parB-like partition protein 3282665..3283741 Roseiflexus castenholzii DSM 13941 5540025 YP_001432641.1 CDS Rcas_2544 NC_009767.1 3284165 3285064 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2820 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3284165..3285064) Roseiflexus castenholzii DSM 13941 5540026 YP_001432642.1 CDS Rcas_2545 NC_009767.1 3285107 3286057 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2819 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3285107..3286057) Roseiflexus castenholzii DSM 13941 5540027 YP_001432643.1 CDS Rcas_2546 NC_009767.1 3286148 3287614 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2818 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(3286148..3287614) Roseiflexus castenholzii DSM 13941 5540028 YP_001432644.1 CDS Rcas_2547 NC_009767.1 3287777 3288859 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: vei:Veis_2277 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(3287777..3288859) Roseiflexus castenholzii DSM 13941 5540029 YP_001432645.1 CDS Rcas_2548 NC_009767.1 3288965 3289279 R KEGG: rrs:RoseRS_2817 hypothetical protein; hypothetical protein complement(3288965..3289279) Roseiflexus castenholzii DSM 13941 5540030 YP_001432646.1 CDS Rcas_2549 NC_009767.1 3289284 3289748 R PFAM: MaoC domain protein dehydratase; KEGG: vei:Veis_2272 MaoC domain protein dehydratase; dehydratase complement(3289284..3289748) Roseiflexus castenholzii DSM 13941 5540031 YP_001432647.1 CDS Rcas_2550 NC_009767.1 3289752 3290906 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_2274 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(3289752..3290906) Roseiflexus castenholzii DSM 13941 5540032 YP_001432648.1 CDS Rcas_2552 NC_009767.1 3291621 3292358 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rrs:RoseRS_2816 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(3291621..3292358) Roseiflexus castenholzii DSM 13941 5540034 YP_001432649.1 CDS Rcas_2553 NC_009767.1 3293036 3294340 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rrs:RoseRS_2815 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 3293036..3294340 Roseiflexus castenholzii DSM 13941 5540035 YP_001432650.1 CDS Rcas_2554 NC_009767.1 3294633 3296069 D PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rrs:RoseRS_2814 alpha-L-fucosidase; alpha-L-fucosidase 3294633..3296069 Roseiflexus castenholzii DSM 13941 5540036 YP_001432651.1 CDS Rcas_2555 NC_009767.1 3296577 3296999 R PFAM: OsmC family protein; KEGG: rrs:RoseRS_2813 OsmC family protein; OsmC family protein complement(3296577..3296999) Roseiflexus castenholzii DSM 13941 5540037 YP_001432652.1 CDS Rcas_2556 NC_009767.1 3297185 3298372 R PFAM: beta-lactamase; KEGG: rrs:RoseRS_2777 beta-lactamase; beta-lactamase complement(3297185..3298372) Roseiflexus castenholzii DSM 13941 5540038 YP_001432653.1 CDS Rcas_2557 NC_009767.1 3298669 3301077 R KEGG: rrs:RoseRS_2778 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La complement(3298669..3301077) Roseiflexus castenholzii DSM 13941 5540039 YP_001432654.1 CDS Rcas_2558 NC_009767.1 3301074 3301493 R KEGG: rrs:RoseRS_2779 molecular chaperone (small heat shock protein)-like protein; molecular chaperone (small heat shock protein)-like protein complement(3301074..3301493) Roseiflexus castenholzii DSM 13941 5540040 YP_001432655.1 CDS Rcas_2559 NC_009767.1 3301512 3301742 R KEGG: tde:TDE0599 PIN domain protein; hypothetical protein complement(3301512..3301742) Roseiflexus castenholzii DSM 13941 5540041 YP_001432656.1 CDS Rcas_2560 NC_009767.1 3301925 3302842 R PFAM: luciferase family protein; KEGG: rrs:RoseRS_2780 luciferase family protein; luciferase family protein complement(3301925..3302842) Roseiflexus castenholzii DSM 13941 5540042 YP_001432657.1 CDS rplS NC_009767.1 3302911 3303261 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3302911..3303261 Roseiflexus castenholzii DSM 13941 5540043 YP_001432658.1 CDS Rcas_2562 NC_009767.1 3303283 3303966 D PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2782 methyltransferase type 11; type 11 methyltransferase 3303283..3303966 Roseiflexus castenholzii DSM 13941 5540044 YP_001432659.1 CDS rnhB NC_009767.1 3303963 3304637 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3303963..3304637 Roseiflexus castenholzii DSM 13941 5540045 YP_001432660.1 CDS Rcas_2564 NC_009767.1 3304634 3305383 D KEGG: rrs:RoseRS_2784 hypothetical protein; hypothetical protein 3304634..3305383 Roseiflexus castenholzii DSM 13941 5540046 YP_001432661.1 CDS Rcas_2565 NC_009767.1 3305389 3306435 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3305389..3306435 Roseiflexus castenholzii DSM 13941 5540047 YP_001432662.1 CDS Rcas_2566 NC_009767.1 3306565 3307596 R PFAM: PfkB domain protein; KEGG: rrs:RoseRS_2788 PfkB domain protein; ribokinase-like domain-containing protein complement(3306565..3307596) Roseiflexus castenholzii DSM 13941 5540048 YP_001432663.1 CDS Rcas_2567 NC_009767.1 3307709 3308050 D KEGG: rrs:RoseRS_2789 hypothetical protein; hypothetical protein 3307709..3308050 Roseiflexus castenholzii DSM 13941 5540049 YP_001432664.1 CDS Rcas_2568 NC_009767.1 3308056 3308655 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Tellurite resistance protein TehB; thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2790 methyltransferase type 11; type 11 methyltransferase complement(3308056..3308655) Roseiflexus castenholzii DSM 13941 5540050 YP_001432665.1 CDS Rcas_2569 NC_009767.1 3308790 3309371 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_2791 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3308790..3309371 Roseiflexus castenholzii DSM 13941 5540051 YP_001432666.1 CDS Rcas_2570 NC_009767.1 3309390 3309650 D KEGG: rrs:RoseRS_2792 hypothetical protein; hypothetical protein 3309390..3309650 Roseiflexus castenholzii DSM 13941 5540052 YP_001432667.1 CDS Rcas_2571 NC_009767.1 3309694 3310296 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_2793 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3309694..3310296 Roseiflexus castenholzii DSM 13941 5540053 YP_001432668.1 CDS Rcas_2572 NC_009767.1 3310328 3310639 D KEGG: rrs:RoseRS_2794 hypothetical protein; hypothetical protein 3310328..3310639 Roseiflexus castenholzii DSM 13941 5540054 YP_001432669.1 CDS Rcas_2573 NC_009767.1 3310715 3311017 D KEGG: rrs:RoseRS_2795 hypothetical protein; hypothetical protein 3310715..3311017 Roseiflexus castenholzii DSM 13941 5540055 YP_001432670.1 CDS Rcas_2574 NC_009767.1 3311719 3323304 R SMART: LamG domain protein jellyroll fold domain protein; KEGG: ana:alr7304 similar to hlyA; LamG domain-containing protein complement(3311719..3323304) Roseiflexus castenholzii DSM 13941 5540056 YP_001432671.1 CDS Rcas_2575 NC_009767.1 3323722 3325365 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2796 von Willebrand factor, type A; von Willebrand factor type A complement(3323722..3325365) Roseiflexus castenholzii DSM 13941 5540057 YP_001432672.1 CDS Rcas_2576 NC_009767.1 3325607 3326359 R KEGG: rrs:RoseRS_2798 hypothetical protein; hypothetical protein complement(3325607..3326359) Roseiflexus castenholzii DSM 13941 5540058 YP_001432673.1 CDS Rcas_2577 NC_009767.1 3326375 3328063 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2799 von Willebrand factor, type A; von Willebrand factor type A complement(3326375..3328063) Roseiflexus castenholzii DSM 13941 5540059 YP_001432674.1 CDS Rcas_2578 NC_009767.1 3328180 3329424 R KEGG: rrs:RoseRS_2800 hypothetical protein; hypothetical protein complement(3328180..3329424) Roseiflexus castenholzii DSM 13941 5540060 YP_001432675.1 CDS Rcas_2580 NC_009767.1 3330434 3331063 D hypothetical protein 3330434..3331063 Roseiflexus castenholzii DSM 13941 5540062 YP_001432676.1 CDS Rcas_2582 NC_009767.1 3332275 3333363 R PFAM: RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2801 RNA methylase; RNA methylase complement(3332275..3333363) Roseiflexus castenholzii DSM 13941 5540064 YP_001432677.1 CDS Rcas_2583 NC_009767.1 3333365 3334594 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1; major facilitator transporter complement(3333365..3334594) Roseiflexus castenholzii DSM 13941 5540065 YP_001432678.1 CDS Rcas_2584 NC_009767.1 3335021 3337807 D KEGG: rrs:RoseRS_2803 chromosome segregation ATPase-like protein; chromosome segregation ATPase-like protein 3335021..3337807 Roseiflexus castenholzii DSM 13941 5540066 YP_001432679.1 CDS Rcas_2585 NC_009767.1 3337957 3338376 R KEGG: rrs:RoseRS_2804 hypothetical protein; hypothetical protein complement(3337957..3338376) Roseiflexus castenholzii DSM 13941 5540067 YP_001432680.1 CDS Rcas_2586 NC_009767.1 3338657 3340474 R PFAM: Citrate transporter; TrkA-C domain protein; KEGG: rrs:RoseRS_2058 citrate transporter; TrkA domain-containing protein complement(3338657..3340474) Roseiflexus castenholzii DSM 13941 5540068 YP_001432681.1 CDS Rcas_2587 NC_009767.1 3340498 3340929 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_4976 protein of unknown function DUF6, transmembrane; hypothetical protein complement(3340498..3340929) Roseiflexus castenholzii DSM 13941 5540069 YP_001432682.1 CDS Rcas_2588 NC_009767.1 3340945 3341463 R hypothetical protein complement(3340945..3341463) Roseiflexus castenholzii DSM 13941 5540070 YP_001432683.1 CDS Rcas_2589 NC_009767.1 3341473 3342519 R PFAM: protein of unknown function UPF0118; KEGG: ava:Ava_2233 hypothetical protein; hypothetical protein complement(3341473..3342519) Roseiflexus castenholzii DSM 13941 5540071 YP_001432684.1 CDS Rcas_2590 NC_009767.1 3342527 3344935 R KEGG: nha:Nham_0995 glucan 1,4-alpha-glucosidase; TIGRFAM: glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related; Glucodextranase N; glucan 1,4-alpha-glucosidase complement(3342527..3344935) Roseiflexus castenholzii DSM 13941 5540072 YP_001432685.1 CDS Rcas_2591 NC_009767.1 3344932 3346044 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_6169 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase complement(3344932..3346044) Roseiflexus castenholzii DSM 13941 5540073 YP_001432686.1 CDS Rcas_2592 NC_009767.1 3346063 3347355 R PFAM: major facilitator superfamily MFS_1; KEGG: tac:Ta0156 hypothetical protein; major facilitator transporter complement(3346063..3347355) Roseiflexus castenholzii DSM 13941 5540074 YP_001432687.1 CDS Rcas_2593 NC_009767.1 3347556 3347732 R hypothetical protein complement(3347556..3347732) Roseiflexus castenholzii DSM 13941 5540075 YP_001432688.1 CDS Rcas_2594 NC_009767.1 3348173 3348736 D PFAM: Propeptide PepSY amd peptidase M4; KEGG: dge:Dgeo_2786 propeptide, PepSY amd peptidase M4; peptidase 3348173..3348736 Roseiflexus castenholzii DSM 13941 5540076 YP_001432689.1 CDS Rcas_2595 NC_009767.1 3348938 3349462 R KEGG: gsu:GSU2763 hypothetical protein; hypothetical protein complement(3348938..3349462) Roseiflexus castenholzii DSM 13941 5540077 YP_001432690.1 CDS Rcas_2596 NC_009767.1 3349494 3350237 R PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2417 conserved hypothetical protein 374; hypothetical protein complement(3349494..3350237) Roseiflexus castenholzii DSM 13941 5540078 YP_001432691.1 CDS Rcas_2597 NC_009767.1 3350264 3350611 R hypothetical protein complement(3350264..3350611) Roseiflexus castenholzii DSM 13941 5540079 YP_001432692.1 CDS Rcas_2598 NC_009767.1 3350611 3352020 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mta:Moth_1477 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3350611..3352020) Roseiflexus castenholzii DSM 13941 5540080 YP_001432693.1 CDS Rcas_2599 NC_009767.1 3352007 3352705 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mta:Moth_1478 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(3352007..3352705) Roseiflexus castenholzii DSM 13941 5540081 YP_001432694.1 CDS Rcas_2603 NC_009767.1 3356496 3356708 R hypothetical protein complement(3356496..3356708) Roseiflexus castenholzii DSM 13941 5540085 YP_001432695.1 CDS Rcas_2604 NC_009767.1 3357153 3363740 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: rrs:RoseRS_2870 alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain-containing protein complement(3357153..3363740) Roseiflexus castenholzii DSM 13941 5540086 YP_001432696.1 CDS Rcas_2605 NC_009767.1 3364598 3367159 R KEGG: rrs:RoseRS_2871 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; 1A family penicillin-binding protein complement(3364598..3367159) Roseiflexus castenholzii DSM 13941 5540087 YP_001432697.1 CDS Rcas_2606 NC_009767.1 3367301 3368134 D PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2872 metallophosphoesterase; metallophosphoesterase 3367301..3368134 Roseiflexus castenholzii DSM 13941 5540088 YP_001432698.1 CDS Rcas_2607 NC_009767.1 3368213 3369013 R KEGG: rrs:RoseRS_2873 hypothetical protein; hypothetical protein complement(3368213..3369013) Roseiflexus castenholzii DSM 13941 5540089 YP_001432699.1 CDS Rcas_2608 NC_009767.1 3369062 3369868 R KEGG: rrs:RoseRS_2873 hypothetical protein; hypothetical protein complement(3369062..3369868) Roseiflexus castenholzii DSM 13941 5540090 YP_001432700.1 CDS Rcas_2609 NC_009767.1 3369926 3370192 D PFAM: protein of unknown function UPF0153; KEGG: rrs:RoseRS_2875 protein of unknown function UPF0153; hypothetical protein 3369926..3370192 Roseiflexus castenholzii DSM 13941 5540091 YP_001432701.1 CDS Rcas_2610 NC_009767.1 3370208 3370639 D KEGG: rrs:RoseRS_2876 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3370208..3370639 Roseiflexus castenholzii DSM 13941 5540092 YP_001432702.1 CDS Rcas_2611 NC_009767.1 3370641 3371843 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2877 major facilitator superfamily MFS_1; major facilitator transporter 3370641..3371843 Roseiflexus castenholzii DSM 13941 5540093 YP_001432703.1 CDS Rcas_2612 NC_009767.1 3372019 3372312 R KEGG: rrs:RoseRS_2878 hypothetical protein; hypothetical protein complement(3372019..3372312) Roseiflexus castenholzii DSM 13941 5540094 YP_001432704.1 CDS Rcas_2613 NC_009767.1 3372575 3372961 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2879 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 3372575..3372961 Roseiflexus castenholzii DSM 13941 5540095 YP_001432705.1 CDS Rcas_2614 NC_009767.1 3372999 3374162 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2880 oxidoreductase domain protein; oxidoreductase domain-containing protein 3372999..3374162 Roseiflexus castenholzii DSM 13941 5540096 YP_001432706.1 CDS Rcas_2615 NC_009767.1 3374519 3375517 D PFAM: AP endonuclease 2 domain protein; Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_2881 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3374519..3375517 Roseiflexus castenholzii DSM 13941 5540097 YP_001432707.1 CDS Rcas_2616 NC_009767.1 3375539 3376315 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2882 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3375539..3376315 Roseiflexus castenholzii DSM 13941 5540098 YP_001432708.1 CDS Rcas_2617 NC_009767.1 3376414 3376836 D KEGG: rrs:RoseRS_2883 hypothetical protein; hypothetical protein 3376414..3376836 Roseiflexus castenholzii DSM 13941 5540099 YP_001432709.1 CDS Rcas_2618 NC_009767.1 3377070 3378239 D catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 3377070..3378239 Roseiflexus castenholzii DSM 13941 5540100 YP_001432710.1 CDS Rcas_2619 NC_009767.1 3378521 3381517 D PFAM: PKD domain containing protein; KEGG: rrs:RoseRS_2885 PKD domain containing protein; PKD domain-containing protein 3378521..3381517 Roseiflexus castenholzii DSM 13941 5540101 YP_001432711.1 CDS Rcas_2620 NC_009767.1 3381596 3383116 D TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_2886 xylulokinase; xylulokinase 3381596..3383116 Roseiflexus castenholzii DSM 13941 5540102 YP_001432712.1 CDS Rcas_2621 NC_009767.1 3383217 3383927 D KEGG: rrs:RoseRS_2887 hypothetical protein; hypothetical protein 3383217..3383927 Roseiflexus castenholzii DSM 13941 5540103 YP_001432713.1 CDS Rcas_2622 NC_009767.1 3384060 3385211 R KEGG: rrs:RoseRS_2888 hypothetical protein; hypothetical protein complement(3384060..3385211) Roseiflexus castenholzii DSM 13941 5540104 YP_001432714.1 CDS Rcas_2623 NC_009767.1 3385437 3386114 D KEGG: rrs:RoseRS_2889 hypothetical protein; hypothetical protein 3385437..3386114 Roseiflexus castenholzii DSM 13941 5540105 YP_001432715.1 CDS Rcas_2624 NC_009767.1 3386122 3386346 R KEGG: rrs:RoseRS_1493 hypothetical protein; hypothetical protein complement(3386122..3386346) Roseiflexus castenholzii DSM 13941 5540106 YP_001432716.1 CDS Rcas_2625 NC_009767.1 3386451 3386855 D PFAM: Endoribonuclease L-PSP; KEGG: rrs:RoseRS_1494 endoribonuclease L-PSP; endoribonuclease L-PSP 3386451..3386855 Roseiflexus castenholzii DSM 13941 5540107 YP_001432717.1 CDS Rcas_2626 NC_009767.1 3386843 3387442 R PFAM: ThiJ/PfpI domain protein; KEGG: rrs:RoseRS_1495 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein complement(3386843..3387442) Roseiflexus castenholzii DSM 13941 5540108 YP_001432718.1 CDS Rcas_2627 NC_009767.1 3387496 3389007 R PFAM: conserved hypothetical protein; MlrC domain protein; KEGG: gtn:GTNG_2000 hypothetical protein; MlrC domain-containing protein complement(3387496..3389007) Roseiflexus castenholzii DSM 13941 5540109 YP_001432719.1 CDS Rcas_2628 NC_009767.1 3389004 3390314 R PFAM: aminotransferase class-III; KEGG: dsy:DSY2219 hypothetical protein; class III aminotransferase complement(3389004..3390314) Roseiflexus castenholzii DSM 13941 5540110 YP_001432720.1 CDS Rcas_2629 NC_009767.1 3390497 3391120 R KEGG: rde:RD1_0666 oxidoreductase; hypothetical protein complement(3390497..3391120) Roseiflexus castenholzii DSM 13941 5540111 YP_001432721.1 CDS Rcas_2630 NC_009767.1 3391861 3392439 R KEGG: rrs:RoseRS_1496 hypothetical protein; hypothetical protein complement(3391861..3392439) Roseiflexus castenholzii DSM 13941 5540112 YP_001432722.1 CDS Rcas_2631 NC_009767.1 3392752 3393195 R PFAM: cytochrome c class I; KEGG: rrs:RoseRS_1498 cytochrome c, class I; cytochrome c class I complement(3392752..3393195) Roseiflexus castenholzii DSM 13941 5540113 YP_001432723.1 CDS Rcas_2632 NC_009767.1 3393310 3393771 R KEGG: rrs:RoseRS_1499 hypothetical protein; hypothetical protein complement(3393310..3393771) Roseiflexus castenholzii DSM 13941 5540114 YP_001432724.1 CDS Rcas_2633 NC_009767.1 3393910 3395751 R PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: rrs:RoseRS_1500 copper resistance protein CopC; copper resistance protein CopC complement(3393910..3395751) Roseiflexus castenholzii DSM 13941 5540115 YP_001432725.1 CDS Rcas_2634 NC_009767.1 3396145 3396666 R PFAM: copper resistance protein CopC; KEGG: rrs:RoseRS_1501 copper resistance protein CopC; copper resistance protein CopC complement(3396145..3396666) Roseiflexus castenholzii DSM 13941 5540116 YP_001432726.1 CDS Rcas_2635 NC_009767.1 3396991 3397479 R KEGG: rrs:RoseRS_1502 hypothetical protein; hypothetical protein complement(3396991..3397479) Roseiflexus castenholzii DSM 13941 5540117 YP_001432727.1 CDS Rcas_2636 NC_009767.1 3397746 3398456 R PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: rrs:RoseRS_1504 ferric reductase domain protein transmembrane component, N-terminal domain; ferric reductase domain-containing protein complement(3397746..3398456) Roseiflexus castenholzii DSM 13941 5540118 YP_001432728.1 CDS Rcas_2637 NC_009767.1 3398475 3399110 R KEGG: rrs:RoseRS_3065 hypothetical protein; hypothetical protein complement(3398475..3399110) Roseiflexus castenholzii DSM 13941 5540119 YP_001432729.1 CDS Rcas_2638 NC_009767.1 3399542 3400405 R KEGG: rrs:RoseRS_1581 rhamnulose-1-phosphate aldolase; rhamnulose-1-phosphate aldolase complement(3399542..3400405) Roseiflexus castenholzii DSM 13941 5540120 YP_001432730.1 CDS Rcas_2639 NC_009767.1 3400646 3402571 D KEGG: rrs:RoseRS_2402 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3400646..3402571 Roseiflexus castenholzii DSM 13941 5540121 YP_001432731.1 CDS Rcas_2641 NC_009767.1 3403522 3405582 D PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: rrs:RoseRS_1579 oligopeptidase B; oligopeptidase B 3403522..3405582 Roseiflexus castenholzii DSM 13941 5540123 YP_001432732.1 CDS Rcas_2642 NC_009767.1 3405794 3406516 R KEGG: rrs:RoseRS_1578 hypothetical protein; hypothetical protein complement(3405794..3406516) Roseiflexus castenholzii DSM 13941 5540124 YP_001432733.1 CDS Rcas_2643 NC_009767.1 3406755 3407165 D KEGG: rrs:RoseRS_1577 hypothetical protein; hypothetical protein 3406755..3407165 Roseiflexus castenholzii DSM 13941 5540125 YP_001432734.1 CDS Rcas_2644 NC_009767.1 3407373 3409874 D PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1576 beta-mannosidase; beta-mannosidase 3407373..3409874 Roseiflexus castenholzii DSM 13941 5540126 YP_001432735.1 CDS Rcas_2645 NC_009767.1 3409884 3411434 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(3409884..3411434) Roseiflexus castenholzii DSM 13941 5540127 YP_001432736.1 CDS Rcas_2646 NC_009767.1 3411624 3412055 R KEGG: rrs:RoseRS_1573 hypothetical protein; hypothetical protein complement(3411624..3412055) Roseiflexus castenholzii DSM 13941 5540128 YP_001432737.1 CDS Rcas_2647 NC_009767.1 3412374 3413948 R PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1572 major facilitator superfamily MFS_1; major facilitator transporter complement(3412374..3413948) Roseiflexus castenholzii DSM 13941 5540129 YP_001432738.1 CDS Rcas_2648 NC_009767.1 3415142 3415453 D KEGG: rrs:RoseRS_1571 hypothetical protein; hypothetical protein 3415142..3415453 Roseiflexus castenholzii DSM 13941 5540130 YP_001432739.1 CDS Rcas_2649 NC_009767.1 3415716 3416363 D KEGG: rrs:RoseRS_1570 hypothetical protein; hypothetical protein 3415716..3416363 Roseiflexus castenholzii DSM 13941 5540131 YP_001432740.1 CDS Rcas_2650 NC_009767.1 3416443 3417504 D KEGG: rrs:RoseRS_1569 hypothetical protein; hypothetical protein 3416443..3417504 Roseiflexus castenholzii DSM 13941 5540132 YP_001432741.1 CDS Rcas_2651 NC_009767.1 3417501 3417740 D KEGG: rrs:RoseRS_1568 hypothetical protein; hypothetical protein 3417501..3417740 Roseiflexus castenholzii DSM 13941 5540133 YP_001432742.1 CDS Rcas_2652 NC_009767.1 3417756 3419069 D KEGG: rrs:RoseRS_1567 hypothetical protein; hypothetical protein 3417756..3419069 Roseiflexus castenholzii DSM 13941 5540134 YP_001432743.1 CDS Rcas_2653 NC_009767.1 3419143 3420861 R PFAM: transcriptional activator domain; KEGG: rrs:RoseRS_1512 response regulator receiver and SARP domain protein; response regulator receiver/SARP domain-containing protein complement(3419143..3420861) Roseiflexus castenholzii DSM 13941 5540135 YP_001432744.1 CDS Rcas_2654 NC_009767.1 3421599 3422588 R TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: rrs:RoseRS_1509 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(3421599..3422588) Roseiflexus castenholzii DSM 13941 5540136 YP_001432745.1 CDS Rcas_2655 NC_009767.1 3423305 3423736 D KEGG: rrs:RoseRS_1508 hypothetical protein; hypothetical protein 3423305..3423736 Roseiflexus castenholzii DSM 13941 5540137 YP_001432746.1 CDS Rcas_2656 NC_009767.1 3423728 3425095 R KEGG: rrs:RoseRS_1507 hypothetical protein; hypothetical protein complement(3423728..3425095) Roseiflexus castenholzii DSM 13941 5540138 YP_001432747.1 CDS Rcas_2657 NC_009767.1 3425402 3426331 D TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_1506 cysteine synthase A; cysteine synthase A 3425402..3426331 Roseiflexus castenholzii DSM 13941 5540139 YP_001432748.1 CDS Rcas_2658 NC_009767.1 3426580 3427515 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3426580..3427515 Roseiflexus castenholzii DSM 13941 5540140 YP_001432749.1 CDS Rcas_2659 NC_009767.1 3427714 3430518 D TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_3064 ATPase, P-type (transporting), HAD superfamily, subfamily IC; HAD superfamily ATPase 3427714..3430518 Roseiflexus castenholzii DSM 13941 5540141 YP_001432750.1 CDS Rcas_2660 NC_009767.1 3430542 3431186 D PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_3063 TrkA-N domain protein; TrkA domain-containing protein 3430542..3431186 Roseiflexus castenholzii DSM 13941 5540142 YP_001432751.1 CDS Rcas_2661 NC_009767.1 3431191 3431853 D PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_3062 TrkA-N domain protein; TrkA domain-containing protein 3431191..3431853 Roseiflexus castenholzii DSM 13941 5540143 YP_001432752.1 CDS Rcas_2663 NC_009767.1 3432333 3434471 D KEGG: rrs:RoseRS_3061 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor signal transduction histidine kinase 3432333..3434471 Roseiflexus castenholzii DSM 13941 5540145 YP_001432753.1 CDS Rcas_2664 NC_009767.1 3434437 3434880 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_3060 response regulator receiver protein; response regulator receiver protein 3434437..3434880 Roseiflexus castenholzii DSM 13941 5540146 YP_001432754.1 CDS Rcas_2665 NC_009767.1 3434895 3436808 D KEGG: rrs:RoseRS_3059 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3434895..3436808 Roseiflexus castenholzii DSM 13941 5540147 YP_001432755.1 CDS Rcas_2666 NC_009767.1 3437135 3438253 D KEGG: rrs:RoseRS_3058 ABC-type sugar transport system periplasmic component-like protein; sugar ABC transporter periplasmic component-like protein 3437135..3438253 Roseiflexus castenholzii DSM 13941 5540148 YP_001432756.1 CDS Rcas_2667 NC_009767.1 3438258 3439775 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3057 ABC transporter related; ABC transporter-like protein 3438258..3439775 Roseiflexus castenholzii DSM 13941 5540149 YP_001432757.1 CDS Rcas_2668 NC_009767.1 3439772 3440740 D PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_3056 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 3439772..3440740 Roseiflexus castenholzii DSM 13941 5540150 YP_001432758.1 CDS Rcas_2669 NC_009767.1 3440737 3441699 D PFAM: inner-membrane translocator; KEGG: rrs:RoseRS_3055 inner-membrane translocator; inner-membrane translocator 3440737..3441699 Roseiflexus castenholzii DSM 13941 5540151 YP_001432759.1 CDS Rcas_2670 NC_009767.1 3441820 3443862 D KEGG: rrs:RoseRS_3054 hypothetical protein; hypothetical protein 3441820..3443862 Roseiflexus castenholzii DSM 13941 5540152 YP_001432760.1 CDS Rcas_2671 NC_009767.1 3443934 3446312 D PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: rrs:RoseRS_3053 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 3443934..3446312 Roseiflexus castenholzii DSM 13941 5540153 YP_001432761.1 CDS Rcas_2672 NC_009767.1 3446331 3447101 D KEGG: rrs:RoseRS_3052 hypothetical protein; hypothetical protein 3446331..3447101 Roseiflexus castenholzii DSM 13941 5540154 YP_001432762.1 CDS Rcas_2673 NC_009767.1 3453182 3455278 D KEGG: rrs:RoseRS_2546 hypothetical protein; hypothetical protein 3453182..3455278 Roseiflexus castenholzii DSM 13941 5540155 YP_001432763.1 CDS Rcas_2674 NC_009767.1 3455478 3455753 R TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: rrs:RoseRS_3010 CRISPR-associated protein Cas2; CRISPR-associated Cas2 family protein complement(3455478..3455753) Roseiflexus castenholzii DSM 13941 5540156 YP_001432764.1 CDS Rcas_2675 NC_009767.1 3455933 3458266 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_3011 von Willebrand factor, type A; von Willebrand factor type A complement(3455933..3458266) Roseiflexus castenholzii DSM 13941 5540157 YP_001432765.1 CDS Rcas_2676 NC_009767.1 3458387 3459385 R TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rrs:RoseRS_3012 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein complement(3458387..3459385) Roseiflexus castenholzii DSM 13941 5540158 YP_001432766.1 CDS Rcas_2677 NC_009767.1 3459724 3461067 R PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: rrs:RoseRS_3013 RNA-directed DNA polymerase (reverse transcriptase); RNA-directed DNA polymerase complement(3459724..3461067) Roseiflexus castenholzii DSM 13941 5540159 YP_001432767.1 CDS Rcas_2678 NC_009767.1 3461083 3462543 R KEGG: lma:LmjF27.0240 kinetoplast-associated protein-like protein; hypothetical protein complement(3461083..3462543) Roseiflexus castenholzii DSM 13941 5540160 YP_001432768.1 CDS Rcas_2679 NC_009767.1 3462558 3463007 R KEGG: rrs:RoseRS_3014 hypothetical protein; hypothetical protein complement(3462558..3463007) Roseiflexus castenholzii DSM 13941 5540161 YP_001432769.1 CDS Rcas_2680 NC_009767.1 3463004 3463192 R hypothetical protein complement(3463004..3463192) Roseiflexus castenholzii DSM 13941 5540162 YP_001432770.1 CDS Rcas_2681 NC_009767.1 3463969 3464346 R KEGG: rrs:RoseRS_3018 hypothetical protein; hypothetical protein complement(3463969..3464346) Roseiflexus castenholzii DSM 13941 5540163 YP_001432771.1 CDS Rcas_2682 NC_009767.1 3464343 3465086 R KEGG: rrs:RoseRS_3019 hypothetical protein; hypothetical protein complement(3464343..3465086) Roseiflexus castenholzii DSM 13941 5540164 YP_001432772.1 CDS Rcas_2683 NC_009767.1 3465083 3466129 R KEGG: rrs:RoseRS_3020 transcriptional regulator-like protein; transcriptional regulator-like protein complement(3465083..3466129) Roseiflexus castenholzii DSM 13941 5540165 YP_001432773.1 CDS Rcas_2684 NC_009767.1 3466291 3467688 R TIGRFAM: CRISPR-associated protein Cas02710; KEGG: rrs:RoseRS_3021 hypothetical protein; CRISPR-associated protein complement(3466291..3467688) Roseiflexus castenholzii DSM 13941 5540166 YP_001432774.1 CDS Rcas_2685 NC_009767.1 3467895 3468467 R PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rrs:RoseRS_2500 CMP/dCMP deaminase, zinc-binding; CMP/dCMP deaminase complement(3467895..3468467) Roseiflexus castenholzii DSM 13941 5540167 YP_001432775.1 CDS Rcas_2686 NC_009767.1 3469717 3470457 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2979 methyltransferase type 12; type 12 methyltransferase 3469717..3470457 Roseiflexus castenholzii DSM 13941 5540168 YP_001432776.1 CDS Rcas_2687 NC_009767.1 3470461 3471210 R KEGG: rrs:RoseRS_2501 hypothetical protein; hypothetical protein complement(3470461..3471210) Roseiflexus castenholzii DSM 13941 5540169 YP_001432777.1 CDS Rcas_2688 NC_009767.1 3471207 3472370 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2502 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3471207..3472370) Roseiflexus castenholzii DSM 13941 5540170 YP_001432778.1 CDS Rcas_2689 NC_009767.1 3472416 3473360 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2503 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(3472416..3473360) Roseiflexus castenholzii DSM 13941 5540171 YP_001432779.1 CDS Rcas_2690 NC_009767.1 3473526 3475928 D PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2641 lytic transglycosylase, catalytic; lytic transglycosylase catalytic 3473526..3475928 Roseiflexus castenholzii DSM 13941 5540172 YP_001432780.1 CDS Rcas_2691 NC_009767.1 3475929 3476210 R KEGG: rrs:RoseRS_2642 hypothetical protein; hypothetical protein complement(3475929..3476210) Roseiflexus castenholzii DSM 13941 5540173 YP_001432781.1 CDS Rcas_2692 NC_009767.1 3476267 3477121 R PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1229 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(3476267..3477121) Roseiflexus castenholzii DSM 13941 5540174 YP_001432782.1 CDS Rcas_2693 NC_009767.1 3477246 3478511 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1230 glycosyl transferase, group 1; group 1 glycosyl transferase complement(3477246..3478511) Roseiflexus castenholzii DSM 13941 5540175 YP_001432783.1 CDS Rcas_2694 NC_009767.1 3478839 3479672 R KEGG: rrs:RoseRS_1231 hypothetical protein; hypothetical protein complement(3478839..3479672) Roseiflexus castenholzii DSM 13941 5540176 YP_001432784.1 CDS Rcas_2695 NC_009767.1 3479669 3480235 R PFAM: protein of unknown function DUF123; KEGG: rrs:RoseRS_1232 protein of unknown function DUF123; hypothetical protein complement(3479669..3480235) Roseiflexus castenholzii DSM 13941 5540177 YP_001432785.1 CDS Rcas_2696 NC_009767.1 3480715 3482694 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1233 ABC transporter related; ABC transporter-like protein complement(3480715..3482694) Roseiflexus castenholzii DSM 13941 5540178 YP_001432786.1 CDS Rcas_2697 NC_009767.1 3482768 3483403 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1234 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3482768..3483403 Roseiflexus castenholzii DSM 13941 5540179 YP_001432787.1 CDS Rcas_2698 NC_009767.1 3483400 3484545 D KEGG: rrs:RoseRS_1235 transmembrane anti-sigma factor; transmembrane anti-sigma factor 3483400..3484545 Roseiflexus castenholzii DSM 13941 5540180 YP_001432788.1 CDS Rcas_2699 NC_009767.1 3484929 3485861 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1236 ABC transporter related; ABC transporter-like protein 3484929..3485861 Roseiflexus castenholzii DSM 13941 5540181 YP_001432789.1 CDS Rcas_2700 NC_009767.1 3486120 3487028 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1237 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 3486120..3487028 Roseiflexus castenholzii DSM 13941 5540182 YP_001432790.1 CDS Rcas_2701 NC_009767.1 3487025 3487939 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1238 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3487025..3487939 Roseiflexus castenholzii DSM 13941 5540183 YP_001432791.1 CDS Rcas_2702 NC_009767.1 3487946 3488458 D KEGG: rrs:RoseRS_1239 hypothetical protein; hypothetical protein 3487946..3488458 Roseiflexus castenholzii DSM 13941 5540184 YP_001432792.1 CDS Rcas_2703 NC_009767.1 3488597 3491197 R KEGG: rrs:RoseRS_1240 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' complement(3488597..3491197) Roseiflexus castenholzii DSM 13941 5540185 YP_001432793.1 CDS Rcas_2704 NC_009767.1 3491963 3492673 R KEGG: rrs:RoseRS_3218 hypothetical protein; hypothetical protein complement(3491963..3492673) Roseiflexus castenholzii DSM 13941 5540186 YP_001432794.1 CDS Rcas_2705 NC_009767.1 3493209 3493697 R KEGG: rrs:RoseRS_3217 hypothetical protein; hypothetical protein complement(3493209..3493697) Roseiflexus castenholzii DSM 13941 5540190 YP_001432795.1 CDS Rcas_2706 NC_009767.1 3493843 3494505 R catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase complement(3493843..3494505) Roseiflexus castenholzii DSM 13941 5540191 YP_001432796.1 CDS Rcas_2707 NC_009767.1 3494706 3495971 R KEGG: rrs:RoseRS_3215 hypothetical protein; hypothetical protein complement(3494706..3495971) Roseiflexus castenholzii DSM 13941 5540192 YP_001432797.1 CDS Rcas_2708 NC_009767.1 3495983 3496306 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_3214 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein complement(3495983..3496306) Roseiflexus castenholzii DSM 13941 5540193 YP_001432798.1 CDS Rcas_2709 NC_009767.1 3496571 3498076 R KEGG: rrs:RoseRS_3213 multidrug resistance efflux pump-like protein; multidrug resistance efflux pump-like protein complement(3496571..3498076) Roseiflexus castenholzii DSM 13941 5540195 YP_001432799.1 CDS Rcas_2710 NC_009767.1 3498116 3499282 R PFAM: cyclic nucleotide-binding; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3212 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(3498116..3499282) Roseiflexus castenholzii DSM 13941 5540196 YP_001432800.1 CDS Rcas_2711 NC_009767.1 3499515 3500756 R KEGG: rrs:RoseRS_2643 lycopene cyclase family protein; TIGRFAM: lycopene cyclase family protein; PFAM: FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; lycopene cyclase family protein complement(3499515..3500756) Roseiflexus castenholzii DSM 13941 5540197 YP_001432801.1 CDS Rcas_2712 NC_009767.1 3500753 3501853 R PFAM: peptidase M29 aminopeptidase II; KEGG: rrs:RoseRS_2644 peptidase M29, aminopeptidase II; peptidase M29 aminopeptidase II complement(3500753..3501853) Roseiflexus castenholzii DSM 13941 5540198 YP_001432802.1 CDS Rcas_2713 NC_009767.1 3501846 3502871 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: rrs:RoseRS_2645 protein of unknown function UPF0052 and CofD; hypothetical protein complement(3501846..3502871) Roseiflexus castenholzii DSM 13941 5540199 YP_001432803.1 CDS Rcas_2714 NC_009767.1 3503143 3503523 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2635 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(3503143..3503523) Roseiflexus castenholzii DSM 13941 5540200 YP_001432804.1 CDS Rcas_2715 NC_009767.1 3503797 3504822 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2646 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(3503797..3504822) Roseiflexus castenholzii DSM 13941 5540201 YP_001432805.1 CDS Rcas_2716 NC_009767.1 3505039 3506013 D KEGG: rrs:RoseRS_2648 hypothetical protein; hypothetical protein 3505039..3506013 Roseiflexus castenholzii DSM 13941 5540202 YP_001432806.1 CDS Rcas_2717 NC_009767.1 3506143 3507516 R KEGG: rrs:RoseRS_2649 hypothetical protein; hypothetical protein complement(3506143..3507516) Roseiflexus castenholzii DSM 13941 5540203 YP_001432807.1 CDS Rcas_2718 NC_009767.1 3507541 3508731 R PFAM: protein of unknown function UPF0052 and CofD; KEGG: rrs:RoseRS_2650 hypothetical protein; hypothetical protein complement(3507541..3508731) Roseiflexus castenholzii DSM 13941 5540204 YP_001432808.1 CDS Rcas_2719 NC_009767.1 3508760 3509866 R PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: rrs:RoseRS_2651 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/subunit complement(3508760..3509866) Roseiflexus castenholzii DSM 13941 5540205 YP_001432809.1 CDS Rcas_2720 NC_009767.1 3509905 3511311 R PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: rrs:RoseRS_2652 phosphomannomutase; phosphomannomutase complement(3509905..3511311) Roseiflexus castenholzii DSM 13941 5540206 YP_001432810.1 CDS Rcas_2721 NC_009767.1 3511615 3512478 R PFAM: protein of unknown function DUF81; KEGG: rsq:Rsph17025_4316 hypothetical protein; hypothetical protein complement(3511615..3512478) Roseiflexus castenholzii DSM 13941 5540207 YP_001432811.1 CDS Rcas_2722 NC_009767.1 3514300 3515793 R PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2653 O-antigen polymerase; O-antigen polymerase complement(3514300..3515793) Roseiflexus castenholzii DSM 13941 5540208 YP_001432812.1 CDS Rcas_2723 NC_009767.1 3515832 3517484 R KEGG: rrs:RoseRS_2654 hypothetical protein; hypothetical protein complement(3515832..3517484) Roseiflexus castenholzii DSM 13941 5540209 YP_001432813.1 CDS Rcas_2724 NC_009767.1 3518263 3520746 D KEGG: rrs:RoseRS_2656 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3518263..3520746 Roseiflexus castenholzii DSM 13941 5540210 YP_001432814.1 CDS Rcas_2725 NC_009767.1 3520769 3523117 D KEGG: rrs:RoseRS_2657 hypothetical protein; hypothetical protein 3520769..3523117 Roseiflexus castenholzii DSM 13941 5540211 YP_001432815.1 CDS Rcas_2726 NC_009767.1 3523177 3525240 D PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_2658 glycosyl transferase, family 39; hypothetical protein 3523177..3525240 Roseiflexus castenholzii DSM 13941 5540212 YP_001432816.1 CDS Rcas_2727 NC_009767.1 3525212 3527401 D PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_2659 glycosyl transferase, family 39; glycosyl transferase family protein 3525212..3527401 Roseiflexus castenholzii DSM 13941 5540213 YP_001432817.1 CDS Rcas_2728 NC_009767.1 3528038 3528511 D KEGG: rrs:RoseRS_4066 hypothetical protein; hypothetical protein 3528038..3528511 Roseiflexus castenholzii DSM 13941 5540214 YP_001432818.1 CDS Rcas_2729 NC_009767.1 3529089 3529307 R KEGG: rrs:RoseRS_2661 hypothetical protein; hypothetical protein complement(3529089..3529307) Roseiflexus castenholzii DSM 13941 5540215 YP_001432819.1 CDS Rcas_2730 NC_009767.1 3529338 3533627 R PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2662 adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing adenylate/guanylate cyclase complement(3529338..3533627) Roseiflexus castenholzii DSM 13941 5540216 YP_001432820.1 CDS Rcas_2731 NC_009767.1 3533703 3535214 R KEGG: rrs:RoseRS_2663 hypothetical protein; hypothetical protein complement(3533703..3535214) Roseiflexus castenholzii DSM 13941 5540217 YP_001432821.1 CDS Rcas_2732 NC_009767.1 3535244 3535546 R SMART: regulatory protein ArsR; KEGG: rrs:RoseRS_2664 regulatory protein, ArsR; ArsR family transcriptional regulator complement(3535244..3535546) Roseiflexus castenholzii DSM 13941 5540218 YP_001432822.1 CDS Rcas_2733 NC_009767.1 3535946 3536707 R KEGG: rrs:RoseRS_2665 hypothetical protein; hypothetical protein complement(3535946..3536707) Roseiflexus castenholzii DSM 13941 5540219 YP_001432823.1 CDS Rcas_2734 NC_009767.1 3536704 3537729 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2666 ABC transporter related; ABC transporter-like protein complement(3536704..3537729) Roseiflexus castenholzii DSM 13941 5540220 YP_001432824.1 CDS Rcas_2735 NC_009767.1 3537793 3538641 R KEGG: rrs:RoseRS_2667 hypothetical protein; hypothetical protein complement(3537793..3538641) Roseiflexus castenholzii DSM 13941 5540221 YP_001432825.1 CDS Rcas_2736 NC_009767.1 3538669 3539046 R PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: rrs:RoseRS_2668 NADH ubiquinone oxidoreductase, 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit complement(3538669..3539046) Roseiflexus castenholzii DSM 13941 5540222 YP_001432826.1 CDS Rcas_2737 NC_009767.1 3539112 3540566 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rrs:RoseRS_2669 NADH/ubiquinone/plastoquinone (complex I); NADH/ubiquinone/plastoquinone (complex I) complement(3539112..3540566) Roseiflexus castenholzii DSM 13941 5540223 YP_001432827.1 CDS Rcas_2738 NC_009767.1 3540615 3541334 R KEGG: rrs:RoseRS_2670 hypothetical protein; hypothetical protein complement(3540615..3541334) Roseiflexus castenholzii DSM 13941 5540224 YP_001432828.1 CDS Rcas_2739 NC_009767.1 3541338 3543062 R KEGG: rrs:RoseRS_2671 hypothetical protein; hypothetical protein complement(3541338..3543062) Roseiflexus castenholzii DSM 13941 5540225 YP_001432829.1 CDS Rcas_2740 NC_009767.1 3543070 3544146 R PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: rrs:RoseRS_2672 NADH-ubiquinone oxidoreductase, chain 49kDa; NADH-ubiquinone oxidoreductase chain 49kDa complement(3543070..3544146) Roseiflexus castenholzii DSM 13941 5540226 YP_001432830.1 CDS Rcas_2741 NC_009767.1 3544478 3544855 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2673 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(3544478..3544855) Roseiflexus castenholzii DSM 13941 5540227 YP_001432831.1 CDS Rcas_2742 NC_009767.1 3545181 3546797 R KEGG: rrs:RoseRS_2674 AAA ATPase; ATPase AAA complement(3545181..3546797) Roseiflexus castenholzii DSM 13941 5540228 YP_001432832.1 CDS Rcas_2743 NC_009767.1 3547043 3547915 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2675 hypothetical protein; type 12 methyltransferase 3547043..3547915 Roseiflexus castenholzii DSM 13941 5540229 YP_001432833.1 CDS Rcas_2744 NC_009767.1 3547932 3549638 D KEGG: rrs:RoseRS_2676 glycosyl transferase, group 1; group 1 glycosyl transferase 3547932..3549638 Roseiflexus castenholzii DSM 13941 5540230 YP_001432834.1 CDS Rcas_2745 NC_009767.1 3549631 3553434 D PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_2677 glycosyl transferase, family 2; glycosyl transferase family protein 3549631..3553434 Roseiflexus castenholzii DSM 13941 5540231 YP_001432835.1 CDS Rcas_2746 NC_009767.1 3553831 3554361 R TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2678 phosphodiesterase, MJ0936 family; phosphodiesterase complement(3553831..3554361) Roseiflexus castenholzii DSM 13941 5540232 YP_001432836.1 CDS Rcas_2747 NC_009767.1 3554909 3556411 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2504 drug resistance transporter, EmrB/QacA subfamily; EmrB/QacA family drug resistance transporter 3554909..3556411 Roseiflexus castenholzii DSM 13941 5540233 YP_001432837.1 CDS Rcas_2748 NC_009767.1 3556602 3557897 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2506 major facilitator superfamily MFS_1; major facilitator transporter 3556602..3557897 Roseiflexus castenholzii DSM 13941 5540234 YP_001432838.1 CDS Rcas_2749 NC_009767.1 3557780 3559963 R KEGG: rrs:RoseRS_2507 membrane protein-like protein; hypothetical protein complement(3557780..3559963) Roseiflexus castenholzii DSM 13941 5540235 YP_001432839.1 CDS Rcas_2750 NC_009767.1 3560027 3561169 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rrs:RoseRS_2508 diguanylate cyclase; diguanylate cyclase complement(3560027..3561169) Roseiflexus castenholzii DSM 13941 5540236 YP_001432840.1 CDS Rcas_2751 NC_009767.1 3561377 3562450 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2509 anti-sigma-factor antagonist; anti-sigma-factor antagonist 3561377..3562450 Roseiflexus castenholzii DSM 13941 5540237 YP_001432841.1 CDS Rcas_2752 NC_009767.1 3562475 3563515 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2510 glycosyl transferase, group 1; group 1 glycosyl transferase 3562475..3563515 Roseiflexus castenholzii DSM 13941 5540238 YP_001432842.1 CDS Rcas_2753 NC_009767.1 3563512 3565905 D PFAM: FG-GAP repeat protein; KEGG: rrs:RoseRS_2511 FG-GAP repeat protein; FG-GAP repeat-containing protein 3563512..3565905 Roseiflexus castenholzii DSM 13941 5540239 YP_001432843.1 CDS Rcas_2754 NC_009767.1 3566294 3567292 D PFAM: ROK family protein; KEGG: rrs:RoseRS_2512 ROK family protein; ROK family protein 3566294..3567292 Roseiflexus castenholzii DSM 13941 5540240 YP_001432844.1 CDS Rcas_2755 NC_009767.1 3567289 3568488 D PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_2513 oxidoreductase domain protein; oxidoreductase domain-containing protein 3567289..3568488 Roseiflexus castenholzii DSM 13941 5540241 YP_001432845.1 CDS Rcas_2756 NC_009767.1 3568579 3569391 D KEGG: rrs:RoseRS_2514 uncharacterized protein containing SIS (sugar isomerase) phosphosugar binding domain-like protein; hypothetical protein 3568579..3569391 Roseiflexus castenholzii DSM 13941 5540242 YP_001432846.1 CDS Rcas_2757 NC_009767.1 3569406 3570176 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2515 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3569406..3570176 Roseiflexus castenholzii DSM 13941 5540243 YP_001432847.1 CDS Rcas_2758 NC_009767.1 3570202 3571224 D PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; KEGG: rrs:RoseRS_2516 methionine synthase, vitamin-B12 independent; vitamin-B12 independent methionine synthase 3570202..3571224 Roseiflexus castenholzii DSM 13941 5540244 YP_001432848.1 CDS Rcas_2759 NC_009767.1 3571299 3571541 R KEGG: rrs:RoseRS_2517 hypothetical protein; hypothetical protein complement(3571299..3571541) Roseiflexus castenholzii DSM 13941 5540245 YP_001432849.1 CDS Rcas_2760 NC_009767.1 3571668 3572582 D PFAM: diacylglycerol kinase catalytic region; KEGG: rrs:RoseRS_2518 diacylglycerol kinase, catalytic region; diacylglycerol kinase catalytic subunit 3571668..3572582 Roseiflexus castenholzii DSM 13941 5540246 YP_001432850.1 CDS Rcas_2761 NC_009767.1 3572589 3573539 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_2519 protein of unknown function DUF6, transmembrane; hypothetical protein complement(3572589..3573539) Roseiflexus castenholzii DSM 13941 5540247 YP_001432851.1 CDS Rcas_2762 NC_009767.1 3574600 3575958 D PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_2520 von Willebrand factor, type A; von Willebrand factor A 3574600..3575958 Roseiflexus castenholzii DSM 13941 5540248 YP_001432852.1 CDS Rcas_2763 NC_009767.1 3575977 3577197 D catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 3575977..3577197 Roseiflexus castenholzii DSM 13941 5540249 YP_001432853.1 CDS Rcas_2764 NC_009767.1 3577219 3577695 D KEGG: rrs:RoseRS_2522 hypothetical protein; hypothetical protein 3577219..3577695 Roseiflexus castenholzii DSM 13941 5540250 YP_001432854.1 CDS Rcas_2765 NC_009767.1 3577692 3578351 D KEGG: rrs:RoseRS_2523 DNA-(apurinic or apyrimidinic site) lyase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase 3577692..3578351 Roseiflexus castenholzii DSM 13941 5540251 YP_001432855.1 CDS Rcas_2766 NC_009767.1 3578422 3578844 D KEGG: rrs:RoseRS_2524 hypothetical protein; hypothetical protein 3578422..3578844 Roseiflexus castenholzii DSM 13941 5540252 YP_001432856.1 CDS Rcas_2767 NC_009767.1 3578901 3582656 R KEGG: rrs:RoseRS_2525 magnesium chelatase, H subunit; TIGRFAM: magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase; magnesium chelatase subunit H complement(3578901..3582656) Roseiflexus castenholzii DSM 13941 5540253 YP_001432857.1 CDS Rcas_2768 NC_009767.1 3582921 3584006 D KEGG: rrs:RoseRS_2835 hypothetical protein; hypothetical protein 3582921..3584006 Roseiflexus castenholzii DSM 13941 5540254 YP_001432858.1 CDS Rcas_2769 NC_009767.1 3584006 3584251 D KEGG: rrs:RoseRS_2834 hypothetical protein; hypothetical protein 3584006..3584251 Roseiflexus castenholzii DSM 13941 5540255 YP_001432859.1 CDS Rcas_2770 NC_009767.1 3584305 3584448 D KEGG: rrs:RoseRS_2832 hypothetical protein; hypothetical protein 3584305..3584448 Roseiflexus castenholzii DSM 13941 5540256 YP_001432860.1 CDS Rcas_2771 NC_009767.1 3584528 3585202 R PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_2831 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(3584528..3585202) Roseiflexus castenholzii DSM 13941 5540257 YP_001432861.1 CDS Rcas_2772 NC_009767.1 3585325 3585774 R KEGG: rrs:RoseRS_2830 hypothetical protein; hypothetical protein complement(3585325..3585774) Roseiflexus castenholzii DSM 13941 5540258 YP_001432862.1 CDS Rcas_2773 NC_009767.1 3585820 3588813 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_2829 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(3585820..3588813) Roseiflexus castenholzii DSM 13941 5540259 YP_001432863.1 CDS Rcas_2774 NC_009767.1 3589185 3594110 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rrs:RoseRS_2828 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3589185..3594110 Roseiflexus castenholzii DSM 13941 5540260 YP_001432864.1 CDS Rcas_2775 NC_009767.1 3594206 3594595 D KEGG: ppd:Ppro_2335 hypothetical protein; hypothetical protein 3594206..3594595 Roseiflexus castenholzii DSM 13941 5540261 YP_001432865.1 CDS Rcas_2776 NC_009767.1 3594715 3594948 D PFAM: protein of unknown function DUF433; KEGG: sus:Acid_6200 protein of unknown function DUF433; hypothetical protein 3594715..3594948 Roseiflexus castenholzii DSM 13941 5540262 YP_001432866.1 CDS Rcas_2777 NC_009767.1 3594945 3595319 D hypothetical protein 3594945..3595319 Roseiflexus castenholzii DSM 13941 5540263 YP_001432867.1 CDS Rcas_2778 NC_009767.1 3595424 3595720 D PFAM: chaperonin Cpn10; KEGG: rrs:RoseRS_1076 chaperonin Cpn10; chaperonin Cpn10 3595424..3595720 Roseiflexus castenholzii DSM 13941 5540264 YP_001432868.1 CDS Rcas_2779 NC_009767.1 3595724 3597364 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: rrs:RoseRS_1077 chaperonin GroEL; chaperonin GroEL 3595724..3597364 Roseiflexus castenholzii DSM 13941 5540265 YP_001432869.1 CDS Rcas_2780 NC_009767.1 3597502 3597996 R PFAM: cytochrome c class I; KEGG: sil:SPOA0361 cytochrome c family protein; cytochrome c class I complement(3597502..3597996) Roseiflexus castenholzii DSM 13941 5540266 YP_001432870.1 CDS Rcas_2781 NC_009767.1 3598025 3599167 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0113 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3598025..3599167) Roseiflexus castenholzii DSM 13941 5540267 YP_001432871.1 CDS Rcas_2782 NC_009767.1 3599167 3599862 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0114 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(3599167..3599862) Roseiflexus castenholzii DSM 13941 5540268 YP_001432872.1 CDS Rcas_2783 NC_009767.1 3599896 3600504 R PFAM: protein of unknown function DUF305; KEGG: rrs:RoseRS_4123 protein of unknown function DUF305; hypothetical protein complement(3599896..3600504) Roseiflexus castenholzii DSM 13941 5540269 YP_001432873.1 CDS Rcas_2784 NC_009767.1 3600697 3601308 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_4336 protein of unknown function DUF820; hypothetical protein 3600697..3601308 Roseiflexus castenholzii DSM 13941 5540270 YP_001432874.1 CDS Rcas_2785 NC_009767.1 3602342 3602641 R KEGG: rrs:RoseRS_1079 hypothetical protein; hypothetical protein complement(3602342..3602641) Roseiflexus castenholzii DSM 13941 5540272 YP_001432875.1 CDS Rcas_2786 NC_009767.1 3602651 3604258 R PFAM: protein of unknown function DUF344; KEGG: rrs:RoseRS_1080 protein of unknown function DUF344; hypothetical protein complement(3602651..3604258) Roseiflexus castenholzii DSM 13941 5540273 YP_001432876.1 CDS Rcas_2787 NC_009767.1 3604261 3605790 R KEGG: rrs:RoseRS_1081 glycogen/starch synthase, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; glycogen/starch synthase complement(3604261..3605790) Roseiflexus castenholzii DSM 13941 5540274 YP_001432877.1 CDS Rcas_2788 NC_009767.1 3605806 3606882 R KEGG: rrs:RoseRS_1082 hypothetical protein; hypothetical protein complement(3605806..3606882) Roseiflexus castenholzii DSM 13941 5540275 YP_001432878.1 CDS Rcas_2789 NC_009767.1 3607080 3608051 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; KEGG: rrs:RoseRS_3536 PAS/PAC sensor protein; PAS/PAC sensor protein complement(3607080..3608051) Roseiflexus castenholzii DSM 13941 5540276 YP_001432879.1 CDS Rcas_2790 NC_009767.1 3608227 3608973 R KEGG: rrs:RoseRS_1083 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(3608227..3608973) Roseiflexus castenholzii DSM 13941 5540277 YP_001432880.1 CDS Rcas_2791 NC_009767.1 3609425 3610573 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_1084 oxidoreductase domain protein; oxidoreductase domain-containing protein 3609425..3610573 Roseiflexus castenholzii DSM 13941 5540278 YP_001432881.1 CDS Rcas_2792 NC_009767.1 3610592 3611509 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rrs:RoseRS_1085 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein 3610592..3611509 Roseiflexus castenholzii DSM 13941 5540279 YP_001432882.1 CDS Rcas_2793 NC_009767.1 3611585 3612205 R PFAM: oxidoreductase molybdopterin binding; KEGG: rrs:RoseRS_1086 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase complement(3611585..3612205) Roseiflexus castenholzii DSM 13941 5540280 YP_001432883.1 CDS Rcas_2794 NC_009767.1 3612220 3612612 R KEGG: rrs:RoseRS_1087 hypothetical protein; hypothetical protein complement(3612220..3612612) Roseiflexus castenholzii DSM 13941 5540281 YP_001432884.1 CDS Rcas_2795 NC_009767.1 3612955 3613755 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_1088 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3612955..3613755 Roseiflexus castenholzii DSM 13941 5540282 YP_001432885.1 CDS Rcas_2796 NC_009767.1 3614095 3615183 R PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_1089 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(3614095..3615183) Roseiflexus castenholzii DSM 13941 5540283 YP_001432886.1 CDS Rcas_2797 NC_009767.1 3615334 3615549 D KEGG: rrs:RoseRS_1090 hypothetical protein; hypothetical protein 3615334..3615549 Roseiflexus castenholzii DSM 13941 5540284 YP_001432887.1 CDS Rcas_2798 NC_009767.1 3615740 3616558 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1091 methyltransferase type 11; type 11 methyltransferase complement(3615740..3616558) Roseiflexus castenholzii DSM 13941 5540285 YP_001432888.1 CDS Rcas_2799 NC_009767.1 3616849 3620202 R PFAM: peptidase S41; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1092 peptidase S41; peptidase S41 complement(3616849..3620202) Roseiflexus castenholzii DSM 13941 5540286 YP_001432889.1 CDS Rcas_2800 NC_009767.1 3620835 3622727 D PFAM: extracellular solute-binding protein family 5; KEGG: rrs:RoseRS_1093 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3620835..3622727 Roseiflexus castenholzii DSM 13941 5540287 YP_001432890.1 CDS Rcas_2801 NC_009767.1 3622821 3623744 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1094 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3622821..3623744 Roseiflexus castenholzii DSM 13941 5540288 YP_001432891.1 CDS Rcas_2802 NC_009767.1 3623763 3624665 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1095 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3623763..3624665 Roseiflexus castenholzii DSM 13941 5540289 YP_001432892.1 CDS Rcas_2803 NC_009767.1 3624935 3625585 D PFAM: regulatory protein ArsR; KEGG: ava:Ava_3702 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 3624935..3625585 Roseiflexus castenholzii DSM 13941 5540290 YP_001432893.1 CDS Rcas_2804 NC_009767.1 3625709 3627046 D PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rrs:RoseRS_1675 catalytic domain of components of various dehydrogenase complexes; dehydrogenase catalytic domain-containing protein 3625709..3627046 Roseiflexus castenholzii DSM 13941 5540291 YP_001432894.1 CDS Rcas_2805 NC_009767.1 3627056 3630529 R PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1674 protein kinase; serine/threonine kinase complement(3627056..3630529) Roseiflexus castenholzii DSM 13941 5540292 YP_001432895.1 CDS Rcas_2806 NC_009767.1 3630588 3632048 R KEGG: cac:CAC2045 secreted protein containing domain of murein hydrolase (MltA homolog); hypothetical protein complement(3630588..3632048) Roseiflexus castenholzii DSM 13941 5540293 YP_001432896.1 CDS Rcas_2807 NC_009767.1 3632063 3636337 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_1673 FHA domain containing protein; FHA domain-containing protein complement(3632063..3636337) Roseiflexus castenholzii DSM 13941 5540294 YP_001432897.1 CDS Rcas_2808 NC_009767.1 3636374 3639058 R TIGRFAM: conserved repeat domain; PFAM: Forkhead-associated protein; Na-Ca exchanger/integrin-beta4; KEGG: rrs:RoseRS_1672 forkhead-associated protein; FHA domain-containing protein complement(3636374..3639058) Roseiflexus castenholzii DSM 13941 5540295 YP_001432898.1 CDS Rcas_2809 NC_009767.1 3639079 3640935 R PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1671 protein kinase; serine/threonine kinase complement(3639079..3640935) Roseiflexus castenholzii DSM 13941 5540296 YP_001432899.1 CDS Rcas_2810 NC_009767.1 3640935 3644039 R PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1670 protein kinase; serine/threonine kinase complement(3640935..3644039) Roseiflexus castenholzii DSM 13941 5540297 YP_001432900.1 CDS Rcas_2811 NC_009767.1 3644101 3647274 R PFAM: Forkhead-associated protein; protein kinase; tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_1669 protein kinase; serine/threonine kinase complement(3644101..3647274) Roseiflexus castenholzii DSM 13941 5540298 YP_001432901.1 CDS Rcas_2812 NC_009767.1 3647292 3648899 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1668 methyltransferase type 12; type 12 methyltransferase complement(3647292..3648899) Roseiflexus castenholzii DSM 13941 5540299 YP_001432902.1 CDS Rcas_2813 NC_009767.1 3648896 3649960 R TIGRFAM: phage tail protein; PFAM: Forkhead-associated protein; tail domain protein; KEGG: rrs:RoseRS_1667 FHA domain containing protein; FHA domain-containing protein complement(3648896..3649960) Roseiflexus castenholzii DSM 13941 5540300 YP_001432903.1 CDS Rcas_2814 NC_009767.1 3650110 3652140 R KEGG: rrs:RoseRS_1666 hypothetical protein; hypothetical protein complement(3650110..3652140) Roseiflexus castenholzii DSM 13941 5540301 YP_001432904.1 CDS Rcas_2815 NC_009767.1 3652152 3652544 R PFAM: GPW/gp25 family protein; KEGG: rrs:RoseRS_1665 gpW/GP25 family protein; GPW/gp25 family protein complement(3652152..3652544) Roseiflexus castenholzii DSM 13941 5540302 YP_001432905.1 CDS Rcas_2816 NC_009767.1 3652551 3652841 R PFAM: PAAR repeat-containing protein; KEGG: rrs:RoseRS_1664 PaaR repeat-containing protein; PAAR repeat-containing protein complement(3652551..3652841) Roseiflexus castenholzii DSM 13941 5540303 YP_001432906.1 CDS Rcas_2817 NC_009767.1 3652855 3654636 R PFAM: Rhs element Vgr protein; KEGG: rrs:RoseRS_1663 rhs element Vgr protein; Rhs element Vgr protein complement(3652855..3654636) Roseiflexus castenholzii DSM 13941 5540304 YP_001432907.1 CDS Rcas_2818 NC_009767.1 3654629 3655306 R PFAM: Peptidoglycan-binding LysM; KEGG: rrs:RoseRS_1662 hypothetical protein; peptidoglycan-binding protein LysM complement(3654629..3655306) Roseiflexus castenholzii DSM 13941 5540305 YP_001432908.1 CDS Rcas_2819 NC_009767.1 3655321 3657939 R KEGG: rrs:RoseRS_1661 hypothetical protein; hypothetical protein complement(3655321..3657939) Roseiflexus castenholzii DSM 13941 5540306 YP_001432909.1 CDS Rcas_2820 NC_009767.1 3658127 3658555 R TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1660 conserved hypothetical phage tail protein; phage tail protein complement(3658127..3658555) Roseiflexus castenholzii DSM 13941 5540307 YP_001432910.1 CDS Rcas_2821 NC_009767.1 3658756 3659124 R KEGG: rrs:RoseRS_1659 hypothetical protein; hypothetical protein complement(3658756..3659124) Roseiflexus castenholzii DSM 13941 5540308 YP_001432911.1 CDS Rcas_2822 NC_009767.1 3659528 3659968 R TIGRFAM: conserved hypothetical phage tail protein; PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_1658 conserved hypothetical phage tail protein; phage tail protein complement(3659528..3659968) Roseiflexus castenholzii DSM 13941 5540309 YP_001432912.1 CDS Rcas_2823 NC_009767.1 3659987 3661552 R PFAM: tail sheath protein; KEGG: rrs:RoseRS_1657 phage tail sheath protein; tail sheath protein complement(3659987..3661552) Roseiflexus castenholzii DSM 13941 5540310 YP_001432913.1 CDS Rcas_2824 NC_009767.1 3661565 3662527 R KEGG: rrs:RoseRS_1656 hypothetical protein; hypothetical protein complement(3661565..3662527) Roseiflexus castenholzii DSM 13941 5540311 YP_001432914.1 CDS Rcas_2825 NC_009767.1 3662524 3662946 R KEGG: rrs:RoseRS_1655 hypothetical protein; hypothetical protein complement(3662524..3662946) Roseiflexus castenholzii DSM 13941 5540312 YP_001432915.1 CDS Rcas_2826 NC_009767.1 3662970 3664634 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rrs:RoseRS_1654 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(3662970..3664634) Roseiflexus castenholzii DSM 13941 5540313 YP_001432916.1 CDS Rcas_2827 NC_009767.1 3664724 3666616 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rrs:RoseRS_1654 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein complement(3664724..3666616) Roseiflexus castenholzii DSM 13941 5540314 YP_001432917.1 CDS Rcas_2828 NC_009767.1 3666636 3667565 R KEGG: rrs:RoseRS_1653 hypothetical protein; hypothetical protein complement(3666636..3667565) Roseiflexus castenholzii DSM 13941 5540315 YP_001432918.1 CDS Rcas_2829 NC_009767.1 3667584 3669236 R KEGG: rrs:RoseRS_1652 hypothetical protein; hypothetical protein complement(3667584..3669236) Roseiflexus castenholzii DSM 13941 5540316 YP_001432919.1 CDS Rcas_2830 NC_009767.1 3670056 3672029 R PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1651 AAA ATPase, central domain protein; ATPase central domain-containing protein complement(3670056..3672029) Roseiflexus castenholzii DSM 13941 5540317 YP_001432920.1 CDS Rcas_2831 NC_009767.1 3672057 3672635 R KEGG: rrs:RoseRS_1650 hypothetical protein; hypothetical protein complement(3672057..3672635) Roseiflexus castenholzii DSM 13941 5540318 YP_001432921.1 CDS Rcas_2832 NC_009767.1 3672925 3674508 D KEGG: rrs:RoseRS_1649 hypothetical protein; hypothetical protein 3672925..3674508 Roseiflexus castenholzii DSM 13941 5540319 YP_001432922.1 CDS Rcas_2833 NC_009767.1 3674568 3674966 R hypothetical protein complement(3674568..3674966) Roseiflexus castenholzii DSM 13941 5540320 YP_001432923.1 CDS Rcas_2834 NC_009767.1 3675132 3675551 R PFAM: RbsD or FucU transport; KEGG: rrs:RoseRS_1648 RbsD or FucU transport; transport protein RbsD/FucU complement(3675132..3675551) Roseiflexus castenholzii DSM 13941 5540321 YP_001432924.1 CDS Rcas_2835 NC_009767.1 3675625 3675918 R PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_1647 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(3675625..3675918) Roseiflexus castenholzii DSM 13941 5540322 YP_001432925.1 CDS Rcas_2836 NC_009767.1 3675933 3676796 R PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_1646 chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein complement(3675933..3676796) Roseiflexus castenholzii DSM 13941 5540323 YP_001432926.1 CDS Rcas_2837 NC_009767.1 3677271 3678461 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1645 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(3677271..3678461) Roseiflexus castenholzii DSM 13941 5540326 YP_001432927.1 CDS Rcas_2838 NC_009767.1 3679327 3680187 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1644 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(3679327..3680187) Roseiflexus castenholzii DSM 13941 5540327 YP_001432928.1 CDS Rcas_2839 NC_009767.1 3680335 3681243 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1642 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(3680335..3681243) Roseiflexus castenholzii DSM 13941 5540328 YP_001432929.1 CDS Rcas_2840 NC_009767.1 3681259 3682377 R KEGG: rrs:RoseRS_1641 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase complement(3681259..3682377) Roseiflexus castenholzii DSM 13941 5540329 YP_001432930.1 CDS Rcas_2841 NC_009767.1 3683137 3685416 D TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rrs:RoseRS_1640 polymorphic outer membrane protein; polymorphic outer membrane protein 3683137..3685416 Roseiflexus castenholzii DSM 13941 5540330 YP_001432931.1 CDS Rcas_2842 NC_009767.1 3685693 3686268 D TIGRFAM: LPXTG-motif cell wall anchor domain; KEGG: rrs:RoseRS_1639 LPXTG-motif cell wall anchor domain; cell wall anchor domain-containing protein 3685693..3686268 Roseiflexus castenholzii DSM 13941 5540331 YP_001432932.1 CDS Rcas_2843 NC_009767.1 3686578 3686970 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3686578..3686970 Roseiflexus castenholzii DSM 13941 5540332 YP_001432933.1 CDS Rcas_2844 NC_009767.1 3686985 3688271 D PFAM: CBS domain containing protein; protein of unknown function DUF190; KEGG: rrs:RoseRS_2494 CBS domain containing protein; hypothetical protein 3686985..3688271 Roseiflexus castenholzii DSM 13941 5540333 YP_001432934.1 CDS Rcas_2845 NC_009767.1 3688502 3690181 D ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3688502..3690181 Roseiflexus castenholzii DSM 13941 5540334 YP_001432935.1 CDS Rcas_2846 NC_009767.1 3690307 3692166 D catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase 3690307..3692166 Roseiflexus castenholzii DSM 13941 5540335 YP_001432936.1 CDS Rcas_2847 NC_009767.1 3692385 3693503 D PFAM: oxidoreductase domain protein; KEGG: rrs:RoseRS_2497 oxidoreductase domain protein; oxidoreductase domain-containing protein 3692385..3693503 Roseiflexus castenholzii DSM 13941 5540336 YP_001432937.1 CDS Rcas_2848 NC_009767.1 3693873 3694718 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rrs:RoseRS_2498 gluconolactonase; gluconolactonase complement(3693873..3694718) Roseiflexus castenholzii DSM 13941 5540337 YP_001432938.1 CDS Rcas_2849 NC_009767.1 3694858 3697743 D PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2499 protein serine phosphatase with GAF(s) sensor(s); GAF sensor-containing protein serine phosphatase 3694858..3697743 Roseiflexus castenholzii DSM 13941 5540338 YP_001432939.1 CDS Rcas_2851 NC_009767.1 3698492 3701677 D PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: rrs:RoseRS_1434 alpha-mannosidase; alpha-mannosidase 3698492..3701677 Roseiflexus castenholzii DSM 13941 5540340 YP_001432940.1 CDS Rcas_2852 NC_009767.1 3702157 3703170 D PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rrs:RoseRS_1433 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 3702157..3703170 Roseiflexus castenholzii DSM 13941 5540341 YP_001432941.1 CDS Rcas_2854 NC_009767.1 3703783 3704754 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_1431 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3703783..3704754 Roseiflexus castenholzii DSM 13941 5540343 YP_001432942.1 CDS Rcas_2855 NC_009767.1 3705244 3707424 D PFAM: cell surface receptor IPT/TIG domain protein; KEGG: rrs:RoseRS_1250 cell surface receptor IPT/TIG domain protein; cell surface receptor IPT/TIG domain-containing protein 3705244..3707424 Roseiflexus castenholzii DSM 13941 5540344 YP_001432943.1 CDS Rcas_2856 NC_009767.1 3707915 3709039 D PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2631 twin-arginine translocation pathway signal; major facilitator transporter 3707915..3709039 Roseiflexus castenholzii DSM 13941 5540345 YP_001432944.1 CDS Rcas_2857 NC_009767.1 3709080 3710528 D PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rrs:RoseRS_1251 peptidase S41; peptidase S41 3709080..3710528 Roseiflexus castenholzii DSM 13941 5540346 YP_001432945.1 CDS trpC NC_009767.1 3710885 3711694 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 3710885..3711694 Roseiflexus castenholzii DSM 13941 5540347 YP_001432946.1 CDS Rcas_2859 NC_009767.1 3711731 3712171 D KEGG: rrs:RoseRS_1253 hypothetical protein; hypothetical protein 3711731..3712171 Roseiflexus castenholzii DSM 13941 5540348 YP_001432947.1 CDS Rcas_2860 NC_009767.1 3712168 3713601 D PFAM: Amidase; KEGG: rrs:RoseRS_1254 amidase; amidase 3712168..3713601 Roseiflexus castenholzii DSM 13941 5540349 YP_001432948.1 CDS Rcas_2861 NC_009767.1 3713986 3714195 D TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: gur:Gura_1405 transcriptional regulator, AbrB family; AbrB family transcriptional regulator 3713986..3714195 Roseiflexus castenholzii DSM 13941 5540350 YP_001432949.1 CDS Rcas_2863 NC_009767.1 3714771 3715253 R KEGG: rrs:RoseRS_2902 response regulator receiver protein; response regulator receiver protein complement(3714771..3715253) Roseiflexus castenholzii DSM 13941 5540352 YP_001432950.1 CDS Rcas_2866 NC_009767.1 3716862 3717692 R TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: tbd:Tbd_1215 integron integrase; integron integrase complement(3716862..3717692) Roseiflexus castenholzii DSM 13941 5540355 YP_001432951.1 CDS Rcas_2867 NC_009767.1 3718619 3718951 D KEGG: mhu:Mhun_2566 hypothetical protein; hypothetical protein 3718619..3718951 Roseiflexus castenholzii DSM 13941 5540356 YP_001432952.1 CDS Rcas_2869 NC_009767.1 3719327 3719641 D KEGG: cph:Cpha266_1139 hypothetical protein; hypothetical protein 3719327..3719641 Roseiflexus castenholzii DSM 13941 5540358 YP_001432953.1 CDS Rcas_2873 NC_009767.1 3721198 3723351 D TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rba:RB4375 probable extracellular nuclease; polymorphic outer membrane protein 3721198..3723351 Roseiflexus castenholzii DSM 13941 5540362 YP_001432954.1 CDS Rcas_2874 NC_009767.1 3723455 3724693 D TIGRFAM: polymorphic outer membrane protein; PFAM: Polymorphic membrane protein Chlamydia; KEGG: rba:RB1661 hypothetical protein; polymorphic outer membrane protein 3723455..3724693 Roseiflexus castenholzii DSM 13941 5540363 YP_001432955.1 CDS Rcas_2875 NC_009767.1 3724683 3724988 D hypothetical protein 3724683..3724988 Roseiflexus castenholzii DSM 13941 5540364 YP_001432956.1 CDS Rcas_2876 NC_009767.1 3724985 3725500 D hypothetical protein 3724985..3725500 Roseiflexus castenholzii DSM 13941 5540365 YP_001432957.1 CDS Rcas_2877 NC_009767.1 3726037 3726585 R KEGG: rrs:RoseRS_2903 hypothetical protein; hypothetical protein complement(3726037..3726585) Roseiflexus castenholzii DSM 13941 5540366 YP_001432958.1 CDS Rcas_2878 NC_009767.1 3726715 3728388 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2904 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 3726715..3728388 Roseiflexus castenholzii DSM 13941 5540367 YP_001432959.1 CDS Rcas_2879 NC_009767.1 3728402 3737749 D PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: rrs:RoseRS_2905 beta-ketoacyl synthase; beta-ketoacyl synthase 3728402..3737749 Roseiflexus castenholzii DSM 13941 5540368 YP_001432960.1 CDS Rcas_2880 NC_009767.1 3737821 3738585 D KEGG: rrs:RoseRS_2906 phosphopantetheinyl transferase-like protein; phosphopantetheinyl transferase-like protein 3737821..3738585 Roseiflexus castenholzii DSM 13941 5540369 YP_001432961.1 CDS Rcas_2881 NC_009767.1 3738582 3740126 D PFAM: carboxyl transferase; KEGG: rrs:RoseRS_2907 propionyl-CoA carboxylase; carboxyl transferase 3738582..3740126 Roseiflexus castenholzii DSM 13941 5540370 YP_001432962.1 CDS Rcas_2882 NC_009767.1 3740137 3741618 D PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_2908 biotin carboxylase domain protein; carbamoyl-phosphate synthase L chain ATP-binding 3740137..3741618 Roseiflexus castenholzii DSM 13941 5540371 YP_001432963.1 CDS Rcas_2883 NC_009767.1 3741630 3742124 D PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rrs:RoseRS_2909 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein 3741630..3742124 Roseiflexus castenholzii DSM 13941 5540372 YP_001432964.1 CDS Rcas_2884 NC_009767.1 3743533 3743697 D PFAM: YcfA family protein; KEGG: bte:BTH_II1999 hypothetical protein; hypothetical protein 3743533..3743697 Roseiflexus castenholzii DSM 13941 5540373 YP_001432965.1 CDS Rcas_2885 NC_009767.1 3743704 3744117 D PFAM: CopG domain protein DNA-binding domain protein; protein of unknown function UPF0150; KEGG: lpf:plpl0034 hypothetical protein; hypothetical protein 3743704..3744117 Roseiflexus castenholzii DSM 13941 5540374 YP_001432966.1 CDS Rcas_2886 NC_009767.1 3744098 3744670 D PFAM: protein of unknown function DUF820; KEGG: rba:RB8456 hypothetical protein; hypothetical protein 3744098..3744670 Roseiflexus castenholzii DSM 13941 5540375 YP_001432967.1 CDS Rcas_2887 NC_009767.1 3744677 3745732 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_3157 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor complement(3744677..3745732) Roseiflexus castenholzii DSM 13941 5540376 YP_001432968.1 CDS Rcas_2888 NC_009767.1 3745802 3747082 R PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_3160 protein of unknown function DUF58; hypothetical protein complement(3745802..3747082) Roseiflexus castenholzii DSM 13941 5540377 YP_001432969.1 CDS trmE NC_009767.1 3747091 3748485 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3747091..3748485) Roseiflexus castenholzii DSM 13941 5540378 YP_001432970.1 CDS Rcas_2890 NC_009767.1 3748787 3750160 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_3162 response regulator receiver protein; response regulator receiver protein complement(3748787..3750160) Roseiflexus castenholzii DSM 13941 5540379 YP_001432971.1 CDS Rcas_2891 NC_009767.1 3750232 3751221 D PFAM: dihydrodipicolinate reductase; KEGG: rrs:RoseRS_3163 dihydrodipicolinate reductase; dihydrodipicolinate reductase 3750232..3751221 Roseiflexus castenholzii DSM 13941 5540380 YP_001432972.1 CDS Rcas_2892 NC_009767.1 3751226 3752005 R KEGG: rrs:RoseRS_3164 hypothetical protein; hypothetical protein complement(3751226..3752005) Roseiflexus castenholzii DSM 13941 5540381 YP_001432973.1 CDS Rcas_2893 NC_009767.1 3752933 3754357 R PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3165 PucC protein; PUCC protein complement(3752933..3754357) Roseiflexus castenholzii DSM 13941 5540382 YP_001432974.1 CDS Rcas_2894 NC_009767.1 3754474 3755922 R PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_3166 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(3754474..3755922) Roseiflexus castenholzii DSM 13941 5540383 YP_001432975.1 CDS Rcas_2895 NC_009767.1 3755929 3756525 R KEGG: rrs:RoseRS_3167 hypothetical protein; hypothetical protein complement(3755929..3756525) Roseiflexus castenholzii DSM 13941 5540384 YP_001432976.1 CDS Rcas_2896 NC_009767.1 3756567 3758597 D GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3756567..3758597 Roseiflexus castenholzii DSM 13941 5540385 YP_001432977.1 CDS Rcas_2897 NC_009767.1 3758833 3759771 R PFAM: ROK family protein; KEGG: rrs:RoseRS_3170 ROK family protein; ROK family protein complement(3758833..3759771) Roseiflexus castenholzii DSM 13941 5540387 YP_001432978.1 CDS Rcas_2898 NC_009767.1 3759768 3760334 R PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_3171 sugar isomerase (SIS); sugar isomerase (SIS) complement(3759768..3760334) Roseiflexus castenholzii DSM 13941 5540388 YP_001432979.1 CDS Rcas_2899 NC_009767.1 3760606 3761154 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: rrs:RoseRS_3172 acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 3760606..3761154 Roseiflexus castenholzii DSM 13941 5540389 YP_001432980.1 CDS Rcas_2900 NC_009767.1 3761205 3762386 D KEGG: rrs:RoseRS_3173 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 3761205..3762386 Roseiflexus castenholzii DSM 13941 5540390 YP_001432981.1 CDS Rcas_2901 NC_009767.1 3762608 3762850 D PFAM: Exonuclease VII small subunit; KEGG: rrs:RoseRS_3174 exodeoxyribonuclease VII, small subunit; exonuclease VII small subunit 3762608..3762850 Roseiflexus castenholzii DSM 13941 5540391 YP_001432982.1 CDS Rcas_2902 NC_009767.1 3762847 3764721 D KEGG: rrs:RoseRS_3175 hypothetical protein; hypothetical protein 3762847..3764721 Roseiflexus castenholzii DSM 13941 5540392 YP_001432983.1 CDS Rcas_2903 NC_009767.1 3764954 3765877 R PFAM: Auxin Efflux Carrier; KEGG: rrs:RoseRS_3176 auxin efflux carrier; auxin efflux carrier complement(3764954..3765877) Roseiflexus castenholzii DSM 13941 5540393 YP_001432984.1 CDS Rcas_2904 NC_009767.1 3765982 3767637 R KEGG: rrs:RoseRS_3177 spermidine synthase-like protein; spermidine synthase-like protein complement(3765982..3767637) Roseiflexus castenholzii DSM 13941 5540394 YP_001432985.1 CDS Rcas_2905 NC_009767.1 3767752 3768009 R PFAM: protein of unknown function YGGT; KEGG: rrs:RoseRS_3178 protein of unknown function YGGT; hypothetical protein complement(3767752..3768009) Roseiflexus castenholzii DSM 13941 5540395 YP_001432986.1 CDS Rcas_2906 NC_009767.1 3768163 3769506 R PFAM: histidinol dehydrogenase; KEGG: rrs:RoseRS_3179 histidinol dehydrogenase; histidinol dehydrogenase complement(3768163..3769506) Roseiflexus castenholzii DSM 13941 5540396 YP_001432987.1 CDS Rcas_2907 NC_009767.1 3769506 3770522 R KEGG: rrs:RoseRS_3180 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase complement(3769506..3770522) Roseiflexus castenholzii DSM 13941 5540397 YP_001432988.1 CDS Rcas_2908 NC_009767.1 3770522 3771073 R KEGG: rrs:RoseRS_3181 hypothetical protein; hypothetical protein complement(3770522..3771073) Roseiflexus castenholzii DSM 13941 5540398 YP_001432989.1 CDS Rcas_2909 NC_009767.1 3771081 3772013 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2797 protein of unknown function DUF820; hypothetical protein complement(3771081..3772013) Roseiflexus castenholzii DSM 13941 5540399 YP_001432990.1 CDS Rcas_2910 NC_009767.1 3772024 3772821 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein complement(3772024..3772821) Roseiflexus castenholzii DSM 13941 5540400 YP_001432991.1 CDS Rcas_2911 NC_009767.1 3772892 3774151 R PFAM: protein of unknown function DUF58; KEGG: rrs:RoseRS_3183 protein of unknown function DUF58; hypothetical protein complement(3772892..3774151) Roseiflexus castenholzii DSM 13941 5540401 YP_001432992.1 CDS Rcas_2912 NC_009767.1 3774148 3775104 R PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_3184 ATPase associated with various cellular activities, AAA_3; ATPase complement(3774148..3775104) Roseiflexus castenholzii DSM 13941 5540402 YP_001432993.1 CDS Rcas_2913 NC_009767.1 3775120 3775701 R KEGG: rrs:RoseRS_3185 hypothetical protein; hypothetical protein complement(3775120..3775701) Roseiflexus castenholzii DSM 13941 5540403 YP_001432994.1 CDS Rcas_2914 NC_009767.1 3776015 3776890 R KEGG: rrs:RoseRS_3186 hypothetical protein; hypothetical protein complement(3776015..3776890) Roseiflexus castenholzii DSM 13941 5540404 YP_001432995.1 CDS Rcas_2915 NC_009767.1 3776894 3778348 R KEGG: rrs:RoseRS_3187 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase complement(3776894..3778348) Roseiflexus castenholzii DSM 13941 5540405 YP_001432996.1 CDS Rcas_2916 NC_009767.1 3778449 3780179 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3188 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3778449..3780179) Roseiflexus castenholzii DSM 13941 5540406 YP_001432997.1 CDS Rcas_2917 NC_009767.1 3780227 3781180 D PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: rrs:RoseRS_3189 HhH-GPD family protein; HhH-GPD family protein 3780227..3781180 Roseiflexus castenholzii DSM 13941 5540407 YP_001432998.1 CDS Rcas_2918 NC_009767.1 3781214 3782251 D PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_3190 histone deacetylase superfamily; histone deacetylase superfamily protein 3781214..3782251 Roseiflexus castenholzii DSM 13941 5540408 YP_001432999.1 CDS hisH NC_009767.1 3782337 3782960 D with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3782337..3782960 Roseiflexus castenholzii DSM 13941 5540409 YP_001433000.1 CDS Rcas_2920 NC_009767.1 3782960 3783673 D catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3782960..3783673 Roseiflexus castenholzii DSM 13941 5540410 YP_001433001.1 CDS Rcas_2921 NC_009767.1 3783683 3784789 D KEGG: rrs:RoseRS_3193 hypothetical protein; hypothetical protein 3783683..3784789 Roseiflexus castenholzii DSM 13941 5540411 YP_001433002.1 CDS Rcas_2922 NC_009767.1 3784819 3785595 D catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3784819..3785595 Roseiflexus castenholzii DSM 13941 5540412 YP_001433003.1 CDS Rcas_2923 NC_009767.1 3785696 3786409 D TIGRFAM: molybdopterin converting factor, subunit 1; MoaD family protein; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; KEGG: rrs:RoseRS_3195 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 3785696..3786409 Roseiflexus castenholzii DSM 13941 5540413 YP_001433004.1 CDS Rcas_2924 NC_009767.1 3786391 3788025 R KEGG: rrs:RoseRS_3196 hypothetical protein; hypothetical protein complement(3786391..3788025) Roseiflexus castenholzii DSM 13941 5540414 YP_001433005.1 CDS Rcas_2925 NC_009767.1 3788091 3789488 R PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rrs:RoseRS_3197 protein of unknown function DUF21; hypothetical protein complement(3788091..3789488) Roseiflexus castenholzii DSM 13941 5540415 YP_001433006.1 CDS Rcas_2926 NC_009767.1 3790230 3790826 R KEGG: xom:XOO_3972 hypothetical protein; hypothetical protein complement(3790230..3790826) Roseiflexus castenholzii DSM 13941 5540416 YP_001433007.1 CDS Rcas_2927 NC_009767.1 3791235 3792221 D TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: rrs:RoseRS_3199 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase subunit beta 3791235..3792221 Roseiflexus castenholzii DSM 13941 5540417 YP_001433008.1 CDS Rcas_2928 NC_009767.1 3792242 3793072 D KEGG: rrs:RoseRS_3200 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 3792242..3793072 Roseiflexus castenholzii DSM 13941 5540418 YP_001433009.1 CDS Rcas_2929 NC_009767.1 3793352 3797041 D PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KEGG: rrs:RoseRS_3201 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3793352..3797041 Roseiflexus castenholzii DSM 13941 5540419 YP_001433010.1 CDS Rcas_2930 NC_009767.1 3797073 3802811 D PFAM: AMP-dependent synthetase and ligase; Enoyl-CoA hydratase/isomerase; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3202 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 3797073..3802811 Roseiflexus castenholzii DSM 13941 5540420 YP_001433011.1 CDS Rcas_2931 NC_009767.1 3803096 3804460 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: rrs:RoseRS_3203 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 3803096..3804460 Roseiflexus castenholzii DSM 13941 5540421 YP_001433012.1 CDS Rcas_2932 NC_009767.1 3804665 3806212 D PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_3204 aldehyde dehydrogenase; aldehyde dehydrogenase 3804665..3806212 Roseiflexus castenholzii DSM 13941 5540422 YP_001433013.1 CDS Rcas_2933 NC_009767.1 3806277 3807275 D TIGRFAM: Quinone oxidoreductase YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3205 alcohol dehydrogenase, zinc-binding domain protein; quinone oxidoreductase YhdH/YhfP 3806277..3807275 Roseiflexus castenholzii DSM 13941 5540423 YP_001433014.1 CDS Rcas_2934 NC_009767.1 3807315 3809417 D KEGG: rrs:RoseRS_3206 hypothetical protein; hypothetical protein 3807315..3809417 Roseiflexus castenholzii DSM 13941 5540424 YP_001433015.1 CDS Rcas_2935 NC_009767.1 3809423 3811498 R PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3207 peptidase S41; peptidase S41 complement(3809423..3811498) Roseiflexus castenholzii DSM 13941 5540425 YP_001433016.1 CDS Rcas_2937 NC_009767.1 3812771 3813583 R PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3091 periplasmic binding protein; periplasmic binding protein complement(3812771..3813583) Roseiflexus castenholzii DSM 13941 5540427 YP_001433017.1 CDS Rcas_2938 NC_009767.1 3813729 3814124 R PFAM: thioesterase superfamily protein; KEGG: rrs:RoseRS_3092 thioesterase superfamily protein; thioesterase superfamily protein complement(3813729..3814124) Roseiflexus castenholzii DSM 13941 5540428 YP_001433018.1 CDS Rcas_2939 NC_009767.1 3814121 3815014 R KEGG: rrs:RoseRS_3093 periplasmic binding protein; periplasmic binding protein complement(3814121..3815014) Roseiflexus castenholzii DSM 13941 5540429 YP_001433019.1 CDS Rcas_2940 NC_009767.1 3815256 3816203 D PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_3094 chaperone DnaJ domain protein; chaperone DnaJ domain-containing protein 3815256..3816203 Roseiflexus castenholzii DSM 13941 5540430 YP_001433020.1 CDS Rcas_2941 NC_009767.1 3816548 3816874 D KEGG: rrs:RoseRS_3095 hypothetical protein; hypothetical protein 3816548..3816874 Roseiflexus castenholzii DSM 13941 5540431 YP_001433021.1 CDS Rcas_2942 NC_009767.1 3816898 3817593 D PFAM: Rhomboid family protein; KEGG: rrs:RoseRS_3096 rhomboid family protein; rhomboid family protein 3816898..3817593 Roseiflexus castenholzii DSM 13941 5540432 YP_001433022.1 CDS Rcas_2943 NC_009767.1 3817609 3818448 D PFAM: protein of unknown function DUF114; KEGG: rrs:RoseRS_3097 protein of unknown function DUF114; hypothetical protein 3817609..3818448 Roseiflexus castenholzii DSM 13941 5540433 YP_001433023.1 CDS Rcas_2944 NC_009767.1 3818850 3819227 R KEGG: rrs:RoseRS_3104 hypothetical protein; hypothetical protein complement(3818850..3819227) Roseiflexus castenholzii DSM 13941 5540434 YP_001433024.1 CDS Rcas_2945 NC_009767.1 3819276 3820496 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rrs:RoseRS_3105 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K complement(3819276..3820496) Roseiflexus castenholzii DSM 13941 5540435 YP_001433025.1 CDS Rcas_2946 NC_009767.1 3821430 3823481 D PFAM: Ig family protein; KEGG: rso:RSc0115 hemagglutinin-related protein; Ig family protein 3821430..3823481 Roseiflexus castenholzii DSM 13941 5540436 YP_001433026.1 CDS Rcas_2947 NC_009767.1 3823663 3824166 R PFAM: glutathione peroxidase; KEGG: rrs:RoseRS_3106 glutathione peroxidase; glutathione peroxidase complement(3823663..3824166) Roseiflexus castenholzii DSM 13941 5540437 YP_001433027.1 CDS Rcas_2948 NC_009767.1 3824316 3824558 D TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_3107 regulatory protein, FmdB family; FmdB family regulatory protein 3824316..3824558 Roseiflexus castenholzii DSM 13941 5540438 YP_001433028.1 CDS Rcas_2949 NC_009767.1 3824589 3825698 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rrs:RoseRS_3108 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 3824589..3825698 Roseiflexus castenholzii DSM 13941 5540439 YP_001433029.1 CDS Rcas_2950 NC_009767.1 3826018 3829002 R KEGG: rrs:RoseRS_3141 hypothetical protein; hypothetical protein complement(3826018..3829002) Roseiflexus castenholzii DSM 13941 5540440 YP_001433030.1 CDS Rcas_2951 NC_009767.1 3830423 3830674 R hypothetical protein complement(3830423..3830674) Roseiflexus castenholzii DSM 13941 5540441 YP_001433031.1 CDS Rcas_2952 NC_009767.1 3830685 3830981 R PFAM: protein of unknown function DUF497; KEGG: rrs:RoseRS_0832 protein of unknown function DUF497; hypothetical protein complement(3830685..3830981) Roseiflexus castenholzii DSM 13941 5540442 YP_001433032.1 CDS Rcas_2954 NC_009767.1 3831291 3833348 R PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: cph:Cpha266_1063 biotin/lipoyl attachment domain-containing protein; biotin/lipoyl attachment domain-containing protein complement(3831291..3833348) Roseiflexus castenholzii DSM 13941 5540444 YP_001433033.1 CDS Rcas_2955 NC_009767.1 3833357 3834811 R PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: cph:Cpha266_1064 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding complement(3833357..3834811) Roseiflexus castenholzii DSM 13941 5540445 YP_001433034.1 CDS fabZ NC_009767.1 3835558 3835989 R in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase complement(3835558..3835989) Roseiflexus castenholzii DSM 13941 5540447 YP_001433035.1 CDS Rcas_2957 NC_009767.1 3836383 3837570 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3121 glycosyl transferase, group 1; group 1 glycosyl transferase 3836383..3837570 Roseiflexus castenholzii DSM 13941 5540448 YP_001433036.1 CDS Rcas_2958 NC_009767.1 3838009 3839109 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3120 glycosyl transferase, group 1; group 1 glycosyl transferase 3838009..3839109 Roseiflexus castenholzii DSM 13941 5540449 YP_001433037.1 CDS Rcas_2959 NC_009767.1 3839281 3840177 D PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_3119 peptidase C60, sortase A and B; peptidase C60 sortase A and B 3839281..3840177 Roseiflexus castenholzii DSM 13941 5540450 YP_001433038.1 CDS recA NC_009767.1 3840391 3841452 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 3840391..3841452 Roseiflexus castenholzii DSM 13941 5540451 YP_001433039.1 CDS Rcas_2961 NC_009767.1 3841660 3842343 D PFAM: regulatory protein RecX; KEGG: rrs:RoseRS_3117 regulatory protein RecX; regulatory protein RecX 3841660..3842343 Roseiflexus castenholzii DSM 13941 5540452 YP_001433040.1 CDS Rcas_2962 NC_009767.1 3842363 3843025 D KEGG: rrs:RoseRS_3116 Zn-dependent hydrolase of the beta-lactamase fold-like protein; Zn-dependent hydrolase 3842363..3843025 Roseiflexus castenholzii DSM 13941 5540453 YP_001433041.1 CDS pyrG NC_009767.1 3843245 3844912 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3843245..3844912 Roseiflexus castenholzii DSM 13941 5540454 YP_001433042.1 CDS Rcas_2965 NC_009767.1 3845860 3846279 D KEGG: rrs:RoseRS_3147 hypothetical protein; hypothetical protein 3845860..3846279 Roseiflexus castenholzii DSM 13941 5540456 YP_001433043.1 CDS Rcas_2966 NC_009767.1 3846842 3847738 D KEGG: rrs:RoseRS_3109 hypothetical protein; hypothetical protein 3846842..3847738 Roseiflexus castenholzii DSM 13941 5540457 YP_001433044.1 CDS Rcas_2967 NC_009767.1 3847935 3850667 R PFAM: phosphoenolpyruvate carboxylase; KEGG: rrs:RoseRS_3110 phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase complement(3847935..3850667) Roseiflexus castenholzii DSM 13941 5540458 YP_001433045.1 CDS Rcas_2968 NC_009767.1 3850702 3852279 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(3850702..3852279) Roseiflexus castenholzii DSM 13941 5540459 YP_001433046.1 CDS Rcas_2969 NC_009767.1 3852395 3854119 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; Proprotein convertase P; KEGG: rrs:RoseRS_3112 conserved repeat domain; hypothetical protein 3852395..3854119 Roseiflexus castenholzii DSM 13941 5540460 YP_001433047.1 CDS Rcas_2970 NC_009767.1 3854116 3854619 D TIGRFAM: conserved repeat domain; PFAM: protein of unknown function DUF11; KEGG: rrs:RoseRS_3112 conserved repeat domain; hypothetical protein 3854116..3854619 Roseiflexus castenholzii DSM 13941 5540461 YP_001433048.1 CDS Rcas_2971 NC_009767.1 3854884 3856116 D KEGG: rrs:RoseRS_3113 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; cysteine desulfurase 3854884..3856116 Roseiflexus castenholzii DSM 13941 5540462 YP_001433049.1 CDS Rcas_2972 NC_009767.1 3856647 3857693 D TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_3114 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 3856647..3857693 Roseiflexus castenholzii DSM 13941 5540464 YP_001433050.1 CDS Rcas_2975 NC_009767.1 3858579 3860228 D KEGG: rrs:RoseRS_3152 O-antigen polymerase; O-antigen polymerase 3858579..3860228 Roseiflexus castenholzii DSM 13941 5540467 YP_001433051.1 CDS Rcas_2976 NC_009767.1 3860249 3860698 R PFAM: PilT protein domain protein; KEGG: rrs:RoseRS_3045 PilT protein domain protein; twitching motility protein PilT complement(3860249..3860698) Roseiflexus castenholzii DSM 13941 5540468 YP_001433052.1 CDS Rcas_2977 NC_009767.1 3860676 3860888 R KEGG: rrs:RoseRS_3046 hypothetical protein; hypothetical protein complement(3860676..3860888) Roseiflexus castenholzii DSM 13941 5540469 YP_001433053.1 CDS Rcas_2978 NC_009767.1 3860978 3862975 R KEGG: rrs:RoseRS_3154 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; helix-hairpin-helix motif; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C complement(3860978..3862975) Roseiflexus castenholzii DSM 13941 5540470 YP_001433054.1 CDS Rcas_2979 NC_009767.1 3863087 3864766 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 3863087..3864766 Roseiflexus castenholzii DSM 13941 5540471 YP_001433055.1 CDS Rcas_2980 NC_009767.1 3864907 3865611 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(3864907..3865611) Roseiflexus castenholzii DSM 13941 5540472 YP_001433056.1 CDS Rcas_2981 NC_009767.1 3865625 3865999 R KEGG: rrs:RoseRS_2911 hypothetical protein; hypothetical protein complement(3865625..3865999) Roseiflexus castenholzii DSM 13941 5540473 YP_001433057.1 CDS Rcas_2982 NC_009767.1 3866003 3866596 R PFAM: electron transport protein SCO1/SenC; KEGG: rrs:RoseRS_2912 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC complement(3866003..3866596) Roseiflexus castenholzii DSM 13941 5540474 YP_001433058.1 CDS Rcas_2983 NC_009767.1 3866866 3867240 D PFAM: ferredoxin; KEGG: rrs:RoseRS_2914 ferredoxin; ferredoxin 3866866..3867240 Roseiflexus castenholzii DSM 13941 5540475 YP_001433059.1 CDS Rcas_2984 NC_009767.1 3868307 3870895 R PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; KEGG: rrs:RoseRS_2921 DEAD/DEAH box helicase domain protein; helicase superfamily protein complement(3868307..3870895) Roseiflexus castenholzii DSM 13941 5540476 YP_001433060.1 CDS Rcas_2985 NC_009767.1 3871146 3871895 D KEGG: rrs:RoseRS_2922 hypothetical protein; hypothetical protein 3871146..3871895 Roseiflexus castenholzii DSM 13941 5540477 YP_001433061.1 CDS Rcas_2986 NC_009767.1 3872571 3873224 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_2923 pyrimidine 5'-nucleotidase; pyrimidine 5'-nucleotidase 3872571..3873224 Roseiflexus castenholzii DSM 13941 5540478 YP_001433062.1 CDS Rcas_2987 NC_009767.1 3873301 3874248 R PFAM: band 7 protein; KEGG: rrs:RoseRS_2924 band 7 protein; hypothetical protein complement(3873301..3874248) Roseiflexus castenholzii DSM 13941 5540479 YP_001433063.1 CDS Rcas_2988 NC_009767.1 3874745 3876472 D TIGRFAM: polymorphic outer membrane protein; KEGG: rrs:RoseRS_2283 polymorphic outer membrane protein; polymorphic outer membrane protein 3874745..3876472 Roseiflexus castenholzii DSM 13941 5540480 YP_001433064.1 CDS Rcas_2989 NC_009767.1 3876487 3876876 R KEGG: rrs:RoseRS_2282 hypothetical protein; hypothetical protein complement(3876487..3876876) Roseiflexus castenholzii DSM 13941 5540481 YP_001433065.1 CDS Rcas_2990 NC_009767.1 3876888 3878978 R PFAM: protein of unknown function DUF255; KEGG: rrs:RoseRS_2279 protein of unknown function DUF255; hypothetical protein complement(3876888..3878978) Roseiflexus castenholzii DSM 13941 5540482 YP_001433066.1 CDS Rcas_2991 NC_009767.1 3879161 3879652 D KEGG: rrs:RoseRS_2278 hypothetical protein; hypothetical protein 3879161..3879652 Roseiflexus castenholzii DSM 13941 5540483 YP_001433067.1 CDS Rcas_2992 NC_009767.1 3879913 3881607 D PFAM: Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region; KEGG: rrs:RoseRS_2277 proline--tRNA ligase; proline--tRNA ligase 3879913..3881607 Roseiflexus castenholzii DSM 13941 5540484 YP_001433068.1 CDS Rcas_2993 NC_009767.1 3881709 3882761 R PFAM: RNA methylase; Methyltransferase type 11; KEGG: rrs:RoseRS_2276 RNA methylase; RNA methylase complement(3881709..3882761) Roseiflexus castenholzii DSM 13941 5540485 YP_001433069.1 CDS Rcas_2994 NC_009767.1 3888161 3889456 D PFAM: glycosyl transferase group 1; Glycosyltransferase 28 domain; Monogalactosyldiacylglycerol synthase; KEGG: rrs:RoseRS_2020 monogalactosyldiacylglycerol synthase; monogalactosyldiacylglycerol synthase 3888161..3889456 Roseiflexus castenholzii DSM 13941 5540490 YP_001433070.1 CDS Rcas_2995 NC_009767.1 3889951 3890433 D SMART: PDZ/DHR/GLGF domain protein; KEGG: chy:CHY_0057 serine protease Do; PDZ/DHR/GLGF domain-containing protein 3889951..3890433 Roseiflexus castenholzii DSM 13941 5540491 YP_001433071.1 CDS Rcas_2996 NC_009767.1 3890430 3891059 D KEGG: rrs:RoseRS_2022 hypothetical protein; hypothetical protein 3890430..3891059 Roseiflexus castenholzii DSM 13941 5540492 YP_001433072.1 CDS Rcas_2997 NC_009767.1 3891056 3892042 D PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_2023 prephenate dehydrogenase; prephenate dehydrogenase 3891056..3892042 Roseiflexus castenholzii DSM 13941 5540493 YP_001433073.1 CDS Rcas_2998 NC_009767.1 3892054 3892458 D PFAM: cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_2024 cobalamin B12-binding domain protein; cobalamin B12-binding domain-containing protein 3892054..3892458 Roseiflexus castenholzii DSM 13941 5540494 YP_001433074.1 CDS Rcas_2999 NC_009767.1 3892463 3893413 D KEGG: rrs:RoseRS_2025 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase; LAO/AO transport system ATPase 3892463..3893413 Roseiflexus castenholzii DSM 13941 5540495 YP_001433075.1 CDS Rcas_3000 NC_009767.1 3893518 3894036 D PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_2026 metal dependent phosphohydrolase; metal dependent phosphohydrolase 3893518..3894036 Roseiflexus castenholzii DSM 13941 5540496 YP_001433076.1 CDS Rcas_3001 NC_009767.1 3894042 3895193 R PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_2027 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(3894042..3895193) Roseiflexus castenholzii DSM 13941 5540497 YP_001433077.1 CDS Rcas_3002 NC_009767.1 3895388 3899092 R KEGG: rrs:RoseRS_2028 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase complement(3895388..3899092) Roseiflexus castenholzii DSM 13941 5540498 YP_001433078.1 CDS Rcas_3003 NC_009767.1 3899281 3899979 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rrs:RoseRS_2029 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 3899281..3899979 Roseiflexus castenholzii DSM 13941 5540499 YP_001433079.1 CDS Rcas_3004 NC_009767.1 3900122 3900799 D KEGG: rrs:RoseRS_2030 hypothetical protein; hypothetical protein 3900122..3900799 Roseiflexus castenholzii DSM 13941 5540500 YP_001433080.1 CDS Rcas_3005 NC_009767.1 3900803 3902212 R KEGG: rrs:RoseRS_2031 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase complement(3900803..3902212) Roseiflexus castenholzii DSM 13941 5540501 YP_001433081.1 CDS Rcas_3006 NC_009767.1 3902372 3903301 R PFAM: methylenetetrahydrofolate reductase; KEGG: rrs:RoseRS_2032 methylenetetrahydrofolate reductase; methylenetetrahydrofolate reductase complement(3902372..3903301) Roseiflexus castenholzii DSM 13941 5540502 YP_001433082.1 CDS Rcas_3007 NC_009767.1 3903323 3904138 R PFAM: UspA domain protein; KEGG: rrs:RoseRS_2033 UspA domain protein; UspA domain-containing protein complement(3903323..3904138) Roseiflexus castenholzii DSM 13941 5540503 YP_001433083.1 CDS Rcas_3008 NC_009767.1 3904141 3905271 R KEGG: rrs:RoseRS_2034 hypothetical protein; hypothetical protein complement(3904141..3905271) Roseiflexus castenholzii DSM 13941 5540504 YP_001433084.1 CDS Rcas_3009 NC_009767.1 3905253 3906158 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2035 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(3905253..3906158) Roseiflexus castenholzii DSM 13941 5540505 YP_001433085.1 CDS Rcas_3010 NC_009767.1 3906239 3906580 R KEGG: rrs:RoseRS_2036 hypothetical protein; hypothetical protein complement(3906239..3906580) Roseiflexus castenholzii DSM 13941 5540506 YP_001433086.1 CDS Rcas_3011 NC_009767.1 3906682 3908460 R TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: rrs:RoseRS_2037 methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(3906682..3908460) Roseiflexus castenholzii DSM 13941 5540507 YP_001433087.1 CDS Rcas_3014 NC_009767.1 3910268 3910744 D hypothetical protein 3910268..3910744 Roseiflexus castenholzii DSM 13941 5540510 YP_001433088.1 CDS Rcas_3015 NC_009767.1 3910731 3911159 D PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4528 DNA polymerase, beta domain protein region; DNA polymerase subunit beta 3910731..3911159 Roseiflexus castenholzii DSM 13941 5540511 YP_001433089.1 CDS Rcas_3016 NC_009767.1 3911152 3911547 D PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4529 protein of unknown function DUF86; hypothetical protein 3911152..3911547 Roseiflexus castenholzii DSM 13941 5540512 YP_001433090.1 CDS Rcas_3017 NC_009767.1 3911826 3912512 D KEGG: rrs:RoseRS_2040 hypothetical protein; hypothetical protein 3911826..3912512 Roseiflexus castenholzii DSM 13941 5540513 YP_001433091.1 CDS Rcas_3018 NC_009767.1 3912513 3913685 D KEGG: rrs:RoseRS_2041 hypothetical protein; hypothetical protein 3912513..3913685 Roseiflexus castenholzii DSM 13941 5540514 YP_001433092.1 CDS Rcas_3019 NC_009767.1 3913694 3914653 D KEGG: rrs:RoseRS_2042 hypothetical protein; hypothetical protein 3913694..3914653 Roseiflexus castenholzii DSM 13941 5540515 YP_001433093.1 CDS Rcas_3020 NC_009767.1 3914669 3915265 D KEGG: rrs:RoseRS_2043 hypothetical protein; hypothetical protein 3914669..3915265 Roseiflexus castenholzii DSM 13941 5540516 YP_001433094.1 CDS Rcas_3021 NC_009767.1 3915262 3916992 D PFAM: asparagine synthase; KEGG: rrs:RoseRS_2044 asparagine synthase; asparagine synthase 3915262..3916992 Roseiflexus castenholzii DSM 13941 5540517 YP_001433095.1 CDS Rcas_3022 NC_009767.1 3917037 3918473 D KEGG: rrs:RoseRS_2045 hypothetical protein; hypothetical protein 3917037..3918473 Roseiflexus castenholzii DSM 13941 5540518 YP_001433096.1 CDS Rcas_3023 NC_009767.1 3918757 3919584 R PFAM: Dimethylmenaquinone methyltransferase; KEGG: rrs:RoseRS_2046 dimethylmenaquinone methyltransferase; hypothetical protein complement(3918757..3919584) Roseiflexus castenholzii DSM 13941 5540519 YP_001433097.1 CDS Rcas_3024 NC_009767.1 3919766 3920695 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2047 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3919766..3920695) Roseiflexus castenholzii DSM 13941 5540520 YP_001433098.1 CDS Rcas_3025 NC_009767.1 3921028 3921843 D KEGG: rrs:RoseRS_2048 hypothetical protein; hypothetical protein 3921028..3921843 Roseiflexus castenholzii DSM 13941 5540521 YP_001433099.1 CDS Rcas_3026 NC_009767.1 3922695 3923834 D PFAM: protein of unknown function DUF100; KEGG: rrs:RoseRS_2049 protein of unknown function DUF100; hypothetical protein 3922695..3923834 Roseiflexus castenholzii DSM 13941 5540522 YP_001433100.1 CDS Rcas_3027 NC_009767.1 3924026 3924226 D hypothetical protein 3924026..3924226 Roseiflexus castenholzii DSM 13941 5540523 YP_001433101.1 CDS Rcas_3028 NC_009767.1 3924223 3924498 R KEGG: rrs:RoseRS_2050 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3924223..3924498) Roseiflexus castenholzii DSM 13941 5540524 YP_001433102.1 CDS Rcas_3029 NC_009767.1 3924568 3925335 R KEGG: rrs:RoseRS_2052 hypothetical protein; hypothetical protein complement(3924568..3925335) Roseiflexus castenholzii DSM 13941 5540525 YP_001433103.1 CDS Rcas_3030 NC_009767.1 3925498 3927432 R PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_2053 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase complement(3925498..3927432) Roseiflexus castenholzii DSM 13941 5540526 YP_001433104.1 CDS Rcas_3031 NC_009767.1 3927464 3928705 R KEGG: rrs:RoseRS_2056 hypothetical protein; hypothetical protein complement(3927464..3928705) Roseiflexus castenholzii DSM 13941 5540527 YP_001433105.1 CDS Rcas_3032 NC_009767.1 3929299 3930828 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2057 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 3929299..3930828 Roseiflexus castenholzii DSM 13941 5540528 YP_001433106.1 CDS Rcas_3033 NC_009767.1 3930825 3932663 D PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_2058 citrate transporter; citrate transporter 3930825..3932663 Roseiflexus castenholzii DSM 13941 5540529 YP_001433107.1 CDS Rcas_3034 NC_009767.1 3932686 3933771 D KEGG: rrs:RoseRS_2060 hypothetical protein; hypothetical protein 3932686..3933771 Roseiflexus castenholzii DSM 13941 5540530 YP_001433108.1 CDS Rcas_3035 NC_009767.1 3933793 3934440 D PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2061 hypothetical protein; metallophosphoesterase 3933793..3934440 Roseiflexus castenholzii DSM 13941 5540531 YP_001433109.1 CDS Rcas_3036 NC_009767.1 3934440 3935408 D KEGG: rrs:RoseRS_2062 hypothetical protein; hypothetical protein 3934440..3935408 Roseiflexus castenholzii DSM 13941 5540532 YP_001433110.1 CDS Rcas_3037 NC_009767.1 3935380 3936372 D KEGG: rrs:RoseRS_2063 hypothetical protein; hypothetical protein 3935380..3936372 Roseiflexus castenholzii DSM 13941 5540533 YP_001433111.1 CDS Rcas_3039 NC_009767.1 3937649 3940060 R KEGG: rrs:RoseRS_2630 hypothetical protein; hypothetical protein complement(3937649..3940060) Roseiflexus castenholzii DSM 13941 5540535 YP_001433112.1 CDS Rcas_3040 NC_009767.1 3940165 3941940 R PFAM: protein of unknown function RIO1; protein kinase; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_2631 protein kinase; PASTA sensor-containing serine/threonine protein kinase complement(3940165..3941940) Roseiflexus castenholzii DSM 13941 5540536 YP_001433113.1 CDS Rcas_3041 NC_009767.1 3941947 3942453 R KEGG: rrs:RoseRS_2632 exonuclease-like protein; exonuclease-like protein complement(3941947..3942453) Roseiflexus castenholzii DSM 13941 5540537 YP_001433114.1 CDS Rcas_3042 NC_009767.1 3942789 3943814 D PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: rrs:RoseRS_2633 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 3942789..3943814 Roseiflexus castenholzii DSM 13941 5540538 YP_001433115.1 CDS Rcas_3043 NC_009767.1 3943882 3946674 D KEGG: rrs:RoseRS_2634 hypothetical protein; hypothetical protein 3943882..3946674 Roseiflexus castenholzii DSM 13941 5540539 YP_001433116.1 CDS Rcas_3044 NC_009767.1 3947010 3947729 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2431 ABC transporter related; ABC transporter-like protein complement(3947010..3947729) Roseiflexus castenholzii DSM 13941 5540540 YP_001433117.1 CDS Rcas_3045 NC_009767.1 3948008 3948616 R KEGG: rrs:RoseRS_2432 hypothetical protein; hypothetical protein complement(3948008..3948616) Roseiflexus castenholzii DSM 13941 5540541 YP_001433118.1 CDS Rcas_3046 NC_009767.1 3948870 3950357 R PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2433 TPR repeat-containing protein; molecular chaperone DnaJ complement(3948870..3950357) Roseiflexus castenholzii DSM 13941 5540542 YP_001433119.1 CDS Rcas_3047 NC_009767.1 3950360 3951187 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2434 FHA domain containing protein; FHA domain-containing protein complement(3950360..3951187) Roseiflexus castenholzii DSM 13941 5540543 YP_001433120.1 CDS Rcas_3048 NC_009767.1 3951658 3952146 D KEGG: rrs:RoseRS_2435 hypothetical protein; hypothetical protein 3951658..3952146 Roseiflexus castenholzii DSM 13941 5540544 YP_001433121.1 CDS Rcas_3049 NC_009767.1 3952676 3953224 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_2429 NUDIX hydrolase; NUDIX hydrolase complement(3952676..3953224) Roseiflexus castenholzii DSM 13941 5540545 YP_001433122.1 CDS Rcas_3050 NC_009767.1 3953299 3954051 D PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: rrs:RoseRS_2428 peptidase C26; peptidase C26 3953299..3954051 Roseiflexus castenholzii DSM 13941 5540546 YP_001433123.1 CDS Rcas_3051 NC_009767.1 3954029 3954907 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2427 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3954029..3954907) Roseiflexus castenholzii DSM 13941 5540547 YP_001433124.1 CDS Rcas_3052 NC_009767.1 3954926 3956566 R PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_2426 amidohydrolase 3; amidohydrolase complement(3954926..3956566) Roseiflexus castenholzii DSM 13941 5540548 YP_001433125.1 CDS ruvB NC_009767.1 3956680 3957723 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3956680..3957723 Roseiflexus castenholzii DSM 13941 5540549 YP_001433126.1 CDS Rcas_3054 NC_009767.1 3957724 3958191 R TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: rrs:RoseRS_2424 methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase complement(3957724..3958191) Roseiflexus castenholzii DSM 13941 5540550 YP_001433127.1 CDS Rcas_3055 NC_009767.1 3958427 3959203 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2423 methyltransferase type 11; type 11 methyltransferase 3958427..3959203 Roseiflexus castenholzii DSM 13941 5540551 YP_001433128.1 CDS Rcas_3056 NC_009767.1 3959469 3960140 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2422 methyltransferase type 11; type 11 methyltransferase 3959469..3960140 Roseiflexus castenholzii DSM 13941 5540552 YP_001433129.1 CDS Rcas_3057 NC_009767.1 3960142 3960822 D PFAM: SNARE associated Golgi protein; KEGG: rrs:RoseRS_2421 hypothetical protein; hypothetical protein 3960142..3960822 Roseiflexus castenholzii DSM 13941 5540553 YP_001433130.1 CDS Rcas_3058 NC_009767.1 3960736 3961803 R KEGG: rrs:RoseRS_2420 hypothetical protein; hypothetical protein complement(3960736..3961803) Roseiflexus castenholzii DSM 13941 5540554 YP_001433131.1 CDS Rcas_3059 NC_009767.1 3961879 3962865 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2419 ABC transporter related; ABC transporter-like protein 3961879..3962865 Roseiflexus castenholzii DSM 13941 5540555 YP_001433132.1 CDS Rcas_3060 NC_009767.1 3962876 3963781 D KEGG: rrs:RoseRS_2418 hypothetical protein; hypothetical protein 3962876..3963781 Roseiflexus castenholzii DSM 13941 5540556 YP_001433133.1 CDS Rcas_3061 NC_009767.1 3963791 3964828 R PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_2417 conserved hypothetical protein 374; hypothetical protein complement(3963791..3964828) Roseiflexus castenholzii DSM 13941 5540557 YP_001433134.1 CDS Rcas_3062 NC_009767.1 3964838 3965821 R PFAM: Transketolase central region; Transketolase domain protein; KEGG: rrs:RoseRS_2416 transketolase, central region; transketolase central region complement(3964838..3965821) Roseiflexus castenholzii DSM 13941 5540558 YP_001433135.1 CDS Rcas_3063 NC_009767.1 3965902 3966903 R PFAM: dehydrogenase E1 component; KEGG: rrs:RoseRS_2415 pyruvate dehydrogenase (acetyl-transferring); pyruvate dehydrogenase complement(3965902..3966903) Roseiflexus castenholzii DSM 13941 5540559 YP_001433136.1 CDS Rcas_3064 NC_009767.1 3966937 3968571 R PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_2414 GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase complement(3966937..3968571) Roseiflexus castenholzii DSM 13941 5540560 YP_001433137.1 CDS Rcas_3065 NC_009767.1 3968910 3970412 D KEGG: rrs:RoseRS_2413 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3968910..3970412 Roseiflexus castenholzii DSM 13941 5540561 YP_001433138.1 CDS Rcas_3066 NC_009767.1 3970412 3971233 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2412 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3970412..3971233 Roseiflexus castenholzii DSM 13941 5540562 YP_001433139.1 CDS Rcas_3067 NC_009767.1 3971609 3972205 D TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rrs:RoseRS_2411 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 3971609..3972205 Roseiflexus castenholzii DSM 13941 5540563 YP_001433140.1 CDS Rcas_3068 NC_009767.1 3972221 3973054 R PFAM: protein of unknown function DUF52; KEGG: rrs:RoseRS_2409 protein of unknown function DUF52; hypothetical protein complement(3972221..3973054) Roseiflexus castenholzii DSM 13941 5540564 YP_001433141.1 CDS Rcas_3069 NC_009767.1 3973705 3976053 D KEGG: rrs:RoseRS_1013 hypothetical protein; hypothetical protein 3973705..3976053 Roseiflexus castenholzii DSM 13941 5540565 YP_001433142.1 CDS Rcas_3070 NC_009767.1 3976292 3977311 R TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rrs:RoseRS_2408 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA complement(3976292..3977311) Roseiflexus castenholzii DSM 13941 5540566 YP_001433143.1 CDS Rcas_3071 NC_009767.1 3977313 3977975 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_2407 TrkA-N domain protein; TrkA domain-containing protein complement(3977313..3977975) Roseiflexus castenholzii DSM 13941 5540567 YP_001433144.1 CDS Rcas_3072 NC_009767.1 3977991 3978635 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_2406 TrkA-N domain protein; TrkA domain-containing protein complement(3977991..3978635) Roseiflexus castenholzii DSM 13941 5540568 YP_001433145.1 CDS Rcas_3073 NC_009767.1 3978645 3979586 R TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: rrs:RoseRS_2405 ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(3978645..3979586) Roseiflexus castenholzii DSM 13941 5540569 YP_001433146.1 CDS Rcas_3074 NC_009767.1 3979650 3980216 R KEGG: rrs:RoseRS_2404 protein of unknown function DUF820; hypothetical protein complement(3979650..3980216) Roseiflexus castenholzii DSM 13941 5540570 YP_001433147.1 CDS Rcas_3075 NC_009767.1 3981384 3982751 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3981384..3982751 Roseiflexus castenholzii DSM 13941 5540571 YP_001433148.1 CDS Rcas_3076 NC_009767.1 3983275 3985125 R KEGG: rrs:RoseRS_2402 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(3983275..3985125) Roseiflexus castenholzii DSM 13941 5540572 YP_001433149.1 CDS Rcas_3077 NC_009767.1 3985241 3985615 R PFAM: response regulator receiver; KEGG: sat:SYN_01078 response regulator receiver domain; response regulator receiver protein complement(3985241..3985615) Roseiflexus castenholzii DSM 13941 5540573 YP_001433150.1 CDS Rcas_3078 NC_009767.1 3985773 3986651 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rrs:RoseRS_2401 protein tyrosine phosphatase; protein tyrosine phosphatase 3985773..3986651 Roseiflexus castenholzii DSM 13941 5540574 YP_001433151.1 CDS Rcas_3079 NC_009767.1 3986948 3987628 D TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: rrs:RoseRS_2400 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase/fumarate reductase cytochrome b subunit 3986948..3987628 Roseiflexus castenholzii DSM 13941 5540575 YP_001433152.1 CDS sdhA NC_009767.1 3987694 3989664 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3987694..3989664 Roseiflexus castenholzii DSM 13941 5540576 YP_001433153.1 CDS Rcas_3081 NC_009767.1 3989758 3990507 D TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2398 succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase/fumarate reductase iron-sulfur subunit 3989758..3990507 Roseiflexus castenholzii DSM 13941 5540577 YP_001433154.1 CDS Rcas_3082 NC_009767.1 3991574 3994024 D KEGG: rrs:RoseRS_2397 hypothetical protein; hypothetical protein 3991574..3994024 Roseiflexus castenholzii DSM 13941 5540578 YP_001433155.1 CDS Rcas_3083 NC_009767.1 3994000 3995307 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: rrs:RoseRS_2396 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase complement(3994000..3995307) Roseiflexus castenholzii DSM 13941 5540579 YP_001433156.1 CDS Rcas_3084 NC_009767.1 3995304 3996248 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_2395 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3995304..3996248) Roseiflexus castenholzii DSM 13941 5540580 YP_001433157.1 CDS Rcas_3085 NC_009767.1 3996347 3997393 R KEGG: rrs:RoseRS_2394 signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA, 36K type complement(3996347..3997393) Roseiflexus castenholzii DSM 13941 5540581 YP_001433158.1 CDS Rcas_3086 NC_009767.1 3998794 4000791 R TIGRFAM: polymorphic outer membrane protein; KEGG: rrs:RoseRS_2393 polymorphic outer membrane protein; polymorphic outer membrane protein complement(3998794..4000791) Roseiflexus castenholzii DSM 13941 5540582 YP_001433159.1 CDS Rcas_3087 NC_009767.1 4001275 4002513 D KEGG: rrs:RoseRS_2392 hypothetical protein; hypothetical protein 4001275..4002513 Roseiflexus castenholzii DSM 13941 5540583 YP_001433160.1 CDS Rcas_3088 NC_009767.1 4002527 4003747 R PFAM: C-methyltransferase; KEGG: rrs:RoseRS_2391 methyltransferase type 12; C-methyltransferase complement(4002527..4003747) Roseiflexus castenholzii DSM 13941 5540584 YP_001433161.1 CDS Rcas_3089 NC_009767.1 4003756 4004814 R PFAM: glycosyl transferase group 1; KEGG: swi:Swit_2376 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4003756..4004814) Roseiflexus castenholzii DSM 13941 5540585 YP_001433162.1 CDS Rcas_3090 NC_009767.1 4004924 4007512 R PFAM: Fibronectin type III domain protein; KEGG: rrs:RoseRS_2388 fibronectin, type III domain protein; fibronectin type III domain-containing protein complement(4004924..4007512) Roseiflexus castenholzii DSM 13941 5540586 YP_001433163.1 CDS Rcas_3091 NC_009767.1 4007782 4009002 R PFAM: C-methyltransferase; KEGG: rrs:RoseRS_2387 C-methyltransferase; C-methyltransferase complement(4007782..4009002) Roseiflexus castenholzii DSM 13941 5540587 YP_001433164.1 CDS Rcas_3092 NC_009767.1 4009190 4010422 R PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: rrs:RoseRS_2386 C-methyltransferase; C-methyltransferase complement(4009190..4010422) Roseiflexus castenholzii DSM 13941 5540588 YP_001433165.1 CDS Rcas_3093 NC_009767.1 4010444 4011496 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_2385 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4010444..4011496) Roseiflexus castenholzii DSM 13941 5540589 YP_001433166.1 CDS Rcas_3094 NC_009767.1 4011549 4012319 R TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_2384 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase complement(4011549..4012319) Roseiflexus castenholzii DSM 13941 5540590 YP_001433167.1 CDS Rcas_3095 NC_009767.1 4012316 4013278 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2383 glycosyl transferase, family 2; glycosyl transferase family protein complement(4012316..4013278) Roseiflexus castenholzii DSM 13941 5540591 YP_001433168.1 CDS Rcas_3096 NC_009767.1 4013402 4014046 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(4013402..4014046) Roseiflexus castenholzii DSM 13941 5540592 YP_001433169.1 CDS Rcas_3097 NC_009767.1 4014024 4015196 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2380 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4014024..4015196) Roseiflexus castenholzii DSM 13941 5540593 YP_001433170.1 CDS Rcas_3098 NC_009767.1 4015214 4016389 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2379 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4015214..4016389) Roseiflexus castenholzii DSM 13941 5540594 YP_001433171.1 CDS Rcas_3099 NC_009767.1 4016397 4017308 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2382 glycosyl transferase, family 2; glycosyl transferase family protein complement(4016397..4017308) Roseiflexus castenholzii DSM 13941 5540595 YP_001433172.1 CDS Rcas_3100 NC_009767.1 4017335 4018312 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2378 glycosyl transferase, family 2; glycosyl transferase family protein complement(4017335..4018312) Roseiflexus castenholzii DSM 13941 5540596 YP_001433173.1 CDS Rcas_3101 NC_009767.1 4018357 4019826 R PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: rrs:RoseRS_2377 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4018357..4019826) Roseiflexus castenholzii DSM 13941 5540597 YP_001433174.1 CDS Rcas_3102 NC_009767.1 4019886 4020785 R KEGG: rrs:RoseRS_2376 hypothetical protein; hypothetical protein complement(4019886..4020785) Roseiflexus castenholzii DSM 13941 5540598 YP_001433175.1 CDS Rcas_3103 NC_009767.1 4020824 4022320 R PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_2375 O-antigen polymerase; O-antigen polymerase complement(4020824..4022320) Roseiflexus castenholzii DSM 13941 5540599 YP_001433176.1 CDS Rcas_3104 NC_009767.1 4022421 4023110 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_2374 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein complement(4022421..4023110) Roseiflexus castenholzii DSM 13941 5540600 YP_001433177.1 CDS Rcas_3105 NC_009767.1 4023107 4024372 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2373 glycosyl transferase, family 2; glycosyl transferase family protein complement(4023107..4024372) Roseiflexus castenholzii DSM 13941 5540601 YP_001433178.1 CDS Rcas_3106 NC_009767.1 4024369 4025517 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2372 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4024369..4025517) Roseiflexus castenholzii DSM 13941 5540602 YP_001433179.1 CDS Rcas_3107 NC_009767.1 4025517 4026797 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2371 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4025517..4026797) Roseiflexus castenholzii DSM 13941 5540603 YP_001433180.1 CDS Rcas_3108 NC_009767.1 4026839 4027528 R PFAM: sugar transferase; KEGG: rrs:RoseRS_2370 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase complement(4026839..4027528) Roseiflexus castenholzii DSM 13941 5540604 YP_001433181.1 CDS Rcas_3109 NC_009767.1 4027626 4028504 R KEGG: rrs:RoseRS_2369 diguanylate cyclase; diguanylate cyclase complement(4027626..4028504) Roseiflexus castenholzii DSM 13941 5540605 YP_001433182.1 CDS Rcas_3110 NC_009767.1 4028501 4029442 R KEGG: rrs:RoseRS_2368 hypothetical protein; hypothetical protein complement(4028501..4029442) Roseiflexus castenholzii DSM 13941 5540606 YP_001433183.1 CDS Rcas_3111 NC_009767.1 4029863 4030906 D PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_2367 glutamine--fructose-6-phosphate transaminase (isomerizing); glutamine--fructose-6-phosphate transaminase 4029863..4030906 Roseiflexus castenholzii DSM 13941 5540607 YP_001433184.1 CDS Rcas_3112 NC_009767.1 4031115 4031594 R PFAM: blue (type 1) copper domain protein; KEGG: rrs:RoseRS_2366 blue (type 1) copper domain protein; blue (type1) copper domain-containing protein complement(4031115..4031594) Roseiflexus castenholzii DSM 13941 5540608 YP_001433185.1 CDS Rcas_3113 NC_009767.1 4031764 4032348 R KEGG: rrs:RoseRS_2365 hypothetical protein; hypothetical protein complement(4031764..4032348) Roseiflexus castenholzii DSM 13941 5540609 YP_001433186.1 CDS Rcas_3114 NC_009767.1 4032564 4034498 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2364 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 4032564..4034498 Roseiflexus castenholzii DSM 13941 5540610 YP_001433187.1 CDS Rcas_3115 NC_009767.1 4034531 4034743 R hypothetical protein complement(4034531..4034743) Roseiflexus castenholzii DSM 13941 5540611 YP_001433188.1 CDS Rcas_3116 NC_009767.1 4034874 4036418 D KEGG: rrs:RoseRS_2363 hypothetical protein; hypothetical protein 4034874..4036418 Roseiflexus castenholzii DSM 13941 5540612 YP_001433189.1 CDS Rcas_3117 NC_009767.1 4036422 4037507 D PFAM: beta-lactamase; KEGG: rrs:RoseRS_2362 beta-lactamase; beta-lactamase 4036422..4037507 Roseiflexus castenholzii DSM 13941 5540613 YP_001433190.1 CDS Rcas_3118 NC_009767.1 4037607 4038197 D PFAM: response regulator receiver; ANTAR domain protein; KEGG: rrs:RoseRS_2361 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 4037607..4038197 Roseiflexus castenholzii DSM 13941 5540614 YP_001433191.1 CDS Rcas_3119 NC_009767.1 4038416 4038829 D TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: rrs:RoseRS_2360 chorismate mutase; chorismate mutase 4038416..4038829 Roseiflexus castenholzii DSM 13941 5540615 YP_001433192.1 CDS Rcas_3120 NC_009767.1 4038966 4040117 D KEGG: rrs:RoseRS_2359 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 4038966..4040117 Roseiflexus castenholzii DSM 13941 5540616 YP_001433193.1 CDS Rcas_3121 NC_009767.1 4040313 4042691 D KEGG: rrs:RoseRS_2358 hypothetical protein; hypothetical protein 4040313..4042691 Roseiflexus castenholzii DSM 13941 5540617 YP_001433194.1 CDS Rcas_3122 NC_009767.1 4042927 4044105 D KEGG: rrs:RoseRS_2357 hypothetical protein; hypothetical protein 4042927..4044105 Roseiflexus castenholzii DSM 13941 5540618 YP_001433195.1 CDS Rcas_3123 NC_009767.1 4044113 4045474 R PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: rrs:RoseRS_2356 ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein complement(4044113..4045474) Roseiflexus castenholzii DSM 13941 5540619 YP_001433196.1 CDS Rcas_3124 NC_009767.1 4045516 4046361 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2355 alpha/beta hydrolase fold; alpha/beta hydrolase complement(4045516..4046361) Roseiflexus castenholzii DSM 13941 5540620 YP_001433197.1 CDS Rcas_3125 NC_009767.1 4046548 4049754 D PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_2354 transcriptional activator domain; transcriptional activator domain-containing protein 4046548..4049754 Roseiflexus castenholzii DSM 13941 5540621 YP_001433198.1 CDS Rcas_3126 NC_009767.1 4050052 4051830 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0494 ABC transporter related; ABC transporter-like protein complement(4050052..4051830) Roseiflexus castenholzii DSM 13941 5540622 YP_001433199.1 CDS Rcas_3127 NC_009767.1 4051827 4053581 R PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0495 ABC transporter related; ABC transporter-like protein complement(4051827..4053581) Roseiflexus castenholzii DSM 13941 5540623 YP_001433200.1 CDS Rcas_3128 NC_009767.1 4054029 4054835 D KEGG: rrs:RoseRS_2352 hypothetical protein; hypothetical protein 4054029..4054835 Roseiflexus castenholzii DSM 13941 5540624 YP_001433201.1 CDS Rcas_3129 NC_009767.1 4054933 4056126 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2351 histidine kinase; histidine kinase 4054933..4056126 Roseiflexus castenholzii DSM 13941 5540625 YP_001433202.1 CDS Rcas_3130 NC_009767.1 4056134 4056667 R PFAM: PspC domain protein; KEGG: rrs:RoseRS_2350 phage shock protein C, PspC; phage shock protein PspC complement(4056134..4056667) Roseiflexus castenholzii DSM 13941 5540626 YP_001433203.1 CDS Rcas_3131 NC_009767.1 4056764 4057867 R PFAM: cell cycle protein; KEGG: rrs:RoseRS_2349 cell cycle protein; cell cycle protein complement(4056764..4057867) Roseiflexus castenholzii DSM 13941 5540627 YP_001433204.1 CDS Rcas_3132 NC_009767.1 4057936 4059576 R PFAM: Polymorphic membrane protein Chlamydia; KEGG: rrs:RoseRS_2348 conserved repeat domain; polymorphic membrane protein complement(4057936..4059576) Roseiflexus castenholzii DSM 13941 5540628 YP_001433205.1 CDS Rcas_3133 NC_009767.1 4060134 4061123 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4060134..4061123 Roseiflexus castenholzii DSM 13941 5540631 YP_001433206.1 CDS Rcas_3134 NC_009767.1 4061269 4061871 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_2347 response regulator receiver protein; response regulator receiver protein complement(4061269..4061871) Roseiflexus castenholzii DSM 13941 5540632 YP_001433207.1 CDS Rcas_3135 NC_009767.1 4061868 4065431 R TIGRFAM: PAS sensor protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_2344 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor hybrid histidine kinase complement(4061868..4065431) Roseiflexus castenholzii DSM 13941 5540633 YP_001433208.1 CDS Rcas_3136 NC_009767.1 4065428 4068187 R KEGG: rrs:RoseRS_2343 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(4065428..4068187) Roseiflexus castenholzii DSM 13941 5540634 YP_001433209.1 CDS Rcas_3137 NC_009767.1 4068588 4068971 D TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: rrs:RoseRS_2342 large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein 4068588..4068971 Roseiflexus castenholzii DSM 13941 5540635 YP_001433210.1 CDS Rcas_3138 NC_009767.1 4069069 4069779 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2341 glycosyl transferase, family 2; glycosyl transferase family protein 4069069..4069779 Roseiflexus castenholzii DSM 13941 5540636 YP_001433211.1 CDS Rcas_3139 NC_009767.1 4069776 4070480 D PFAM: SNARE associated Golgi protein; KEGG: rrs:RoseRS_2340 hypothetical protein; hypothetical protein 4069776..4070480 Roseiflexus castenholzii DSM 13941 5540637 YP_001433212.1 CDS Rcas_3140 NC_009767.1 4070829 4071974 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2339 glycosyl transferase, group 1; group 1 glycosyl transferase 4070829..4071974 Roseiflexus castenholzii DSM 13941 5540638 YP_001433213.1 CDS Rcas_3141 NC_009767.1 4071971 4072693 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_2338 PHP C-terminal domain protein; phosphotransferase domain-containing protein 4071971..4072693 Roseiflexus castenholzii DSM 13941 5540639 YP_001433214.1 CDS Rcas_3142 NC_009767.1 4072871 4074361 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rrs:RoseRS_2337 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 4072871..4074361 Roseiflexus castenholzii DSM 13941 5540640 YP_001433215.1 CDS Rcas_3143 NC_009767.1 4074325 4075254 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2335 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4074325..4075254) Roseiflexus castenholzii DSM 13941 5540641 YP_001433216.1 CDS Rcas_3144 NC_009767.1 4075255 4076619 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: rrs:RoseRS_2334 small GTP-binding protein; small GTP-binding protein complement(4075255..4076619) Roseiflexus castenholzii DSM 13941 5540642 YP_001433217.1 CDS Rcas_3145 NC_009767.1 4076762 4077241 R TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; hydrogenase maturation peptidase superfamily; PFAM: peptidase M52 hydrogen uptake protein; KEGG: rrs:RoseRS_2322 hydrogenase expression/formation protein; hydrogenase expression/formation protein complement(4076762..4077241) Roseiflexus castenholzii DSM 13941 5540643 YP_001433218.1 CDS Rcas_3146 NC_009767.1 4077347 4078123 R TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: rrs:RoseRS_2321 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit complement(4077347..4078123) Roseiflexus castenholzii DSM 13941 5540644 YP_001433219.1 CDS Rcas_3147 NC_009767.1 4078132 4079844 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: rrs:RoseRS_2320 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit complement(4078132..4079844) Roseiflexus castenholzii DSM 13941 5540645 YP_001433220.1 CDS Rcas_3148 NC_009767.1 4079875 4081128 R KEGG: rrs:RoseRS_2319 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA complement(4079875..4081128) Roseiflexus castenholzii DSM 13941 5540646 YP_001433221.1 CDS Rcas_3149 NC_009767.1 4081277 4082968 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2318 ABC transporter related; ABC transporter-like protein complement(4081277..4082968) Roseiflexus castenholzii DSM 13941 5540647 YP_001433222.1 CDS Rcas_3150 NC_009767.1 4083451 4086297 R PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_2317 protein of unknown function DUF214; hypothetical protein complement(4083451..4086297) Roseiflexus castenholzii DSM 13941 5540648 YP_001433223.1 CDS Rcas_3151 NC_009767.1 4086301 4087902 R PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_2316 secretion protein HlyD family protein; secretion protein HlyD family protein complement(4086301..4087902) Roseiflexus castenholzii DSM 13941 5540649 YP_001433224.1 CDS Rcas_3152 NC_009767.1 4088059 4090971 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2315 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(4088059..4090971) Roseiflexus castenholzii DSM 13941 5540650 YP_001433225.1 CDS Rcas_3153 NC_009767.1 4091527 4094799 D PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2312 peptidase S41; peptidase S41 4091527..4094799 Roseiflexus castenholzii DSM 13941 5540651 YP_001433226.1 CDS Rcas_3154 NC_009767.1 4094845 4095897 D PFAM: Aldose 1-epimerase; KEGG: rrs:RoseRS_2311 aldose 1-epimerase; aldose 1-epimerase 4094845..4095897 Roseiflexus castenholzii DSM 13941 5540652 YP_001433227.1 CDS Rcas_3155 NC_009767.1 4096442 4096639 D KEGG: rrs:RoseRS_2310 hypothetical protein; hypothetical protein 4096442..4096639 Roseiflexus castenholzii DSM 13941 5540653 YP_001433228.1 CDS Rcas_3156 NC_009767.1 4096646 4097638 D KEGG: rrs:RoseRS_2309 hypothetical protein; hypothetical protein 4096646..4097638 Roseiflexus castenholzii DSM 13941 5540654 YP_001433229.1 CDS Rcas_3157 NC_009767.1 4097716 4098864 D PFAM: CBS domain containing protein; peptidase M50; KEGG: rrs:RoseRS_2308 peptidase M50; peptidase M50 4097716..4098864 Roseiflexus castenholzii DSM 13941 5540655 YP_001433230.1 CDS Rcas_3158 NC_009767.1 4098956 4100293 R PFAM: periplasmic binding protein/LacI transcriptional regulator; Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_2307 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(4098956..4100293) Roseiflexus castenholzii DSM 13941 5540656 YP_001433231.1 CDS Rcas_3159 NC_009767.1 4100353 4100925 R KEGG: rrs:RoseRS_2306 hypothetical protein; hypothetical protein complement(4100353..4100925) Roseiflexus castenholzii DSM 13941 5540657 YP_001433232.1 CDS Rcas_3160 NC_009767.1 4101057 4101944 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2305 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(4101057..4101944) Roseiflexus castenholzii DSM 13941 5540658 YP_001433233.1 CDS Rcas_3161 NC_009767.1 4101938 4103983 R KEGG: rrs:RoseRS_2304 signal transduction histidine kinase, nitrogen specific, NtrB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; nitrogen specific signal transduction histidine kinase NtrB complement(4101938..4103983) Roseiflexus castenholzii DSM 13941 5540659 YP_001433234.1 CDS Rcas_3162 NC_009767.1 4104282 4105046 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_2303 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR complement(4104282..4105046) Roseiflexus castenholzii DSM 13941 5540660 YP_001433235.1 CDS Rcas_3163 NC_009767.1 4105896 4106681 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_2302 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4105896..4106681 Roseiflexus castenholzii DSM 13941 5540661 YP_001433236.1 CDS Rcas_3164 NC_009767.1 4106948 4108309 D KEGG: rrs:RoseRS_2301 permease of the major facilitator superfamily-like protein; major facilitator superfamily permease 4106948..4108309 Roseiflexus castenholzii DSM 13941 5540662 YP_001433237.1 CDS Rcas_3165 NC_009767.1 4108519 4109856 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_2300 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase 4108519..4109856 Roseiflexus castenholzii DSM 13941 5540663 YP_001433238.1 CDS Rcas_3166 NC_009767.1 4109978 4110754 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_2299 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 4109978..4110754 Roseiflexus castenholzii DSM 13941 5540664 YP_001433239.1 CDS Rcas_3167 NC_009767.1 4110768 4111754 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_2298 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 4110768..4111754 Roseiflexus castenholzii DSM 13941 5540665 YP_001433240.1 CDS Rcas_3168 NC_009767.1 4112260 4112694 D PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_2297 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 4112260..4112694 Roseiflexus castenholzii DSM 13941 5540666 YP_001433241.1 CDS Rcas_3169 NC_009767.1 4112691 4113269 D PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_2296 stage II sporulation E family protein; Ser/Thr phosphatase 4112691..4113269 Roseiflexus castenholzii DSM 13941 5540667 YP_001433242.1 CDS Rcas_3170 NC_009767.1 4113290 4116025 D KEGG: rrs:RoseRS_2295 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 4113290..4116025 Roseiflexus castenholzii DSM 13941 5540668 YP_001433243.1 CDS Rcas_3171 NC_009767.1 4116578 4117726 D PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_2294 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4116578..4117726 Roseiflexus castenholzii DSM 13941 5540669 YP_001433244.1 CDS Rcas_3172 NC_009767.1 4117856 4119478 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_2293 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4117856..4119478 Roseiflexus castenholzii DSM 13941 5540670 YP_001433245.1 CDS Rcas_3173 NC_009767.1 4119495 4120277 R KEGG: rrs:RoseRS_0260 hypothetical protein; hypothetical protein complement(4119495..4120277) Roseiflexus castenholzii DSM 13941 5540671 YP_001433246.1 CDS Rcas_3174 NC_009767.1 4120519 4121070 R KEGG: pna:Pnap_2774 2-nitropropane dioxygenase, NPD; hypothetical protein complement(4120519..4121070) Roseiflexus castenholzii DSM 13941 5540672 YP_001433247.1 CDS Rcas_3175 NC_009767.1 4121214 4122470 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4121214..4122470 Roseiflexus castenholzii DSM 13941 5540673 YP_001433248.1 CDS Rcas_3176 NC_009767.1 4122467 4123114 D TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: rrs:RoseRS_2693 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 4122467..4123114 Roseiflexus castenholzii DSM 13941 5540674 YP_001433249.1 CDS Rcas_3177 NC_009767.1 4123430 4126345 R TIGRFAM: PAS sensor protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; GAF domain protein; PAS fold-4 domain protein; KEGG: rrs:RoseRS_2694 PAS/PAC sensor protein; GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase complement(4123430..4126345) Roseiflexus castenholzii DSM 13941 5540675 YP_001433250.1 CDS Rcas_3178 NC_009767.1 4127041 4127445 R KEGG: rrs:RoseRS_1706 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase complement(4127041..4127445) Roseiflexus castenholzii DSM 13941 5540676 YP_001433251.1 CDS Rcas_3179 NC_009767.1 4127782 4128630 D KEGG: rrs:RoseRS_1705 hypothetical protein; hypothetical protein 4127782..4128630 Roseiflexus castenholzii DSM 13941 5540677 YP_001433252.1 CDS Rcas_3180 NC_009767.1 4128955 4130049 D PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rrs:RoseRS_1704 peptidase M20; peptidase M20 4128955..4130049 Roseiflexus castenholzii DSM 13941 5540678 YP_001433253.1 CDS Rcas_3181 NC_009767.1 4130456 4131640 R KEGG: rrs:RoseRS_1703 hypothetical protein; hypothetical protein complement(4130456..4131640) Roseiflexus castenholzii DSM 13941 5540679 YP_001433254.1 CDS Rcas_3182 NC_009767.1 4131826 4136076 R KEGG: rrs:RoseRS_1702 hypothetical protein; hypothetical protein complement(4131826..4136076) Roseiflexus castenholzii DSM 13941 5540680 YP_001433255.1 CDS Rcas_3183 NC_009767.1 4136573 4138189 D PFAM: protein of unknown function DUF87; KEGG: rrs:RoseRS_1701 protein of unknown function DUF87; hypothetical protein 4136573..4138189 Roseiflexus castenholzii DSM 13941 5540681 YP_001433256.1 CDS Rcas_3184 NC_009767.1 4138418 4140223 R PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_3082 peptidase M61 domain protein; peptidase M61 domain-containing protein complement(4138418..4140223) Roseiflexus castenholzii DSM 13941 5540682 YP_001433257.1 CDS Rcas_3185 NC_009767.1 4140284 4142200 R KEGG: rrs:RoseRS_3081 hypothetical protein; hypothetical protein complement(4140284..4142200) Roseiflexus castenholzii DSM 13941 5540683 YP_001433258.1 CDS Rcas_3186 NC_009767.1 4142639 4143679 D TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_3080 threonine synthase; threonine synthase 4142639..4143679 Roseiflexus castenholzii DSM 13941 5540684 YP_001433259.1 CDS Rcas_3187 NC_009767.1 4143699 4145102 D KEGG: rrs:RoseRS_3079 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 4143699..4145102 Roseiflexus castenholzii DSM 13941 5540685 YP_001433260.1 CDS Rcas_3188 NC_009767.1 4145378 4146436 D KEGG: rrs:RoseRS_3078 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; aspartate-semialdehyde dehydrogenase 4145378..4146436 Roseiflexus castenholzii DSM 13941 5540686 YP_001433261.1 CDS Rcas_3189 NC_009767.1 4146762 4147655 D PFAM: MCP methyltransferase CheR-type; Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mlo:mll3672 methyl transferase-like protein; chemotaxis protein CheR 4146762..4147655 Roseiflexus castenholzii DSM 13941 5540687 YP_001433262.1 CDS Rcas_3190 NC_009767.1 4147824 4149623 R TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: rrs:RoseRS_3077 integral membrane protein MviN; integral membrane protein MviN complement(4147824..4149623) Roseiflexus castenholzii DSM 13941 5540688 YP_001433263.1 CDS Rcas_3191 NC_009767.1 4149985 4150191 D PFAM: ribosomal protein S20; KEGG: rrs:RoseRS_3076 ribosomal protein S20; 30S ribosomal protein S20 4149985..4150191 Roseiflexus castenholzii DSM 13941 5540689 YP_001433264.1 CDS Rcas_3192 NC_009767.1 4150198 4151262 R TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: rrs:RoseRS_3075 DNA polymerase III, delta subunit; DNA polymerase III subunit delta complement(4150198..4151262) Roseiflexus castenholzii DSM 13941 5540690 YP_001433265.1 CDS Rcas_3193 NC_009767.1 4151383 4152384 R PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_3074 aldo/keto reductase; aldo/keto reductase complement(4151383..4152384) Roseiflexus castenholzii DSM 13941 5540691 YP_001433266.1 CDS Rcas_3194 NC_009767.1 4152862 4154586 D KEGG: rrs:RoseRS_3073 hypothetical protein; hypothetical protein 4152862..4154586 Roseiflexus castenholzii DSM 13941 5540692 YP_001433267.1 CDS Rcas_3195 NC_009767.1 4154693 4156084 R KEGG: rrs:RoseRS_0993 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing CheR-type MCP methyltransferase complement(4154693..4156084) Roseiflexus castenholzii DSM 13941 5540693 YP_001433268.1 CDS Rcas_3196 NC_009767.1 4156081 4157121 R PFAM: CheB methylesterase; response regulator receiver; KEGG: rrs:RoseRS_0994 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase complement(4156081..4157121) Roseiflexus castenholzii DSM 13941 5540694 YP_001433269.1 CDS Rcas_3197 NC_009767.1 4157118 4157594 R PFAM: CheW domain protein; KEGG: rrs:RoseRS_0995 CheW protein; CheW protein complement(4157118..4157594) Roseiflexus castenholzii DSM 13941 5540695 YP_001433270.1 CDS Rcas_3198 NC_009767.1 4157587 4157958 R KEGG: rrs:RoseRS_0996 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor complement(4157587..4157958) Roseiflexus castenholzii DSM 13941 5540696 YP_001433271.1 CDS Rcas_3199 NC_009767.1 4157971 4158351 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_0997 response regulator receiver protein; response regulator receiver protein complement(4157971..4158351) Roseiflexus castenholzii DSM 13941 5540697 YP_001433272.1 CDS Rcas_3200 NC_009767.1 4158363 4160708 R PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: rrs:RoseRS_0998 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase complement(4158363..4160708) Roseiflexus castenholzii DSM 13941 5540698 YP_001433273.1 CDS Rcas_3201 NC_009767.1 4160726 4162552 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rrs:RoseRS_0999 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4160726..4162552) Roseiflexus castenholzii DSM 13941 5540699 YP_001433274.1 CDS Rcas_3202 NC_009767.1 4162643 4163191 R PFAM: CheW domain protein; KEGG: rrs:RoseRS_1000 CheW protein; CheW protein complement(4162643..4163191) Roseiflexus castenholzii DSM 13941 5540700 YP_001433275.1 CDS sucC NC_009767.1 4163559 4164698 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(4163559..4164698) Roseiflexus castenholzii DSM 13941 5540701 YP_001433276.1 CDS Rcas_3204 NC_009767.1 4164759 4165151 R KEGG: rrs:RoseRS_3931 hypothetical protein; hypothetical protein complement(4164759..4165151) Roseiflexus castenholzii DSM 13941 5540702 YP_001433277.1 CDS Rcas_3205 NC_009767.1 4165246 4165536 D PFAM: PspC domain protein; KEGG: rrs:RoseRS_3932 phage shock protein C, PspC; phage shock protein PspC 4165246..4165536 Roseiflexus castenholzii DSM 13941 5540703 YP_001433278.1 CDS Rcas_3206 NC_009767.1 4165778 4166959 R KEGG: rrs:RoseRS_3911 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase complement(4165778..4166959) Roseiflexus castenholzii DSM 13941 5540704 YP_001433279.1 CDS Rcas_3207 NC_009767.1 4166972 4170445 R PFAM: WD-40 repeat protein; KEGG: rrs:RoseRS_3910 WD-40 repeat protein; hypothetical protein complement(4166972..4170445) Roseiflexus castenholzii DSM 13941 5540705 YP_001433280.1 CDS Rcas_3208 NC_009767.1 4170442 4172511 R KEGG: rrs:RoseRS_3909 hypothetical protein; hypothetical protein complement(4170442..4172511) Roseiflexus castenholzii DSM 13941 5540706 YP_001433281.1 CDS Rcas_3209 NC_009767.1 4172585 4176016 D KEGG: rrs:RoseRS_3908 hypothetical protein; hypothetical protein 4172585..4176016 Roseiflexus castenholzii DSM 13941 5540707 YP_001433282.1 CDS Rcas_3210 NC_009767.1 4176061 4178190 D KEGG: rrs:RoseRS_3907 hypothetical protein; hypothetical protein 4176061..4178190 Roseiflexus castenholzii DSM 13941 5540708 YP_001433283.1 CDS thrH NC_009767.1 4179070 4179684 D catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; phosphoserine phosphatase 4179070..4179684 Roseiflexus castenholzii DSM 13941 5540709 YP_001433284.1 CDS Rcas_3212 NC_009767.1 4179849 4180784 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3901 glycosyl transferase, family 2; glycosyl transferase family protein 4179849..4180784 Roseiflexus castenholzii DSM 13941 5540710 YP_001433285.1 CDS Rcas_3213 NC_009767.1 4180781 4181776 D PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_3900 conserved hypothetical protein 374; hypothetical protein 4180781..4181776 Roseiflexus castenholzii DSM 13941 5540711 YP_001433286.1 CDS Rcas_3214 NC_009767.1 4182162 4182581 D KEGG: rrs:RoseRS_3899 hypothetical protein; hypothetical protein 4182162..4182581 Roseiflexus castenholzii DSM 13941 5540712 YP_001433287.1 CDS Rcas_3215 NC_009767.1 4182606 4183595 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_3898 oxidoreductase domain protein; oxidoreductase domain-containing protein 4182606..4183595 Roseiflexus castenholzii DSM 13941 5540713 YP_001433288.1 CDS Rcas_3216 NC_009767.1 4183607 4184569 D PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_3897 aldo/keto reductase; aldo/keto reductase 4183607..4184569 Roseiflexus castenholzii DSM 13941 5540714 YP_001433289.1 CDS Rcas_3217 NC_009767.1 4184874 4185839 D TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: rrs:RoseRS_3928 GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 4184874..4185839 Roseiflexus castenholzii DSM 13941 5540715 YP_001433290.1 CDS Rcas_3218 NC_009767.1 4185828 4186472 R KEGG: rrs:RoseRS_3927 hypothetical protein; hypothetical protein complement(4185828..4186472) Roseiflexus castenholzii DSM 13941 5540716 YP_001433291.1 CDS Rcas_3219 NC_009767.1 4186509 4187837 R PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_3926 aminotransferase class-III; class III aminotransferase complement(4186509..4187837) Roseiflexus castenholzii DSM 13941 5540717 YP_001433292.1 CDS Rcas_3220 NC_009767.1 4187853 4191389 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: RNA-processing protein HAT helix repeating-containing protein; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3925 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(4187853..4191389) Roseiflexus castenholzii DSM 13941 5540718 YP_001433293.1 CDS Rcas_3221 NC_009767.1 4191394 4192725 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: rrs:RoseRS_3924 response regulator receiver modulated diguanylate cyclase; response regulator receiver modulated diguanylate cyclase complement(4191394..4192725) Roseiflexus castenholzii DSM 13941 5540719 YP_001433294.1 CDS Rcas_3222 NC_009767.1 4192816 4193760 R PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3923 PfkB domain protein; ribokinase-like domain-containing protein complement(4192816..4193760) Roseiflexus castenholzii DSM 13941 5540720 YP_001433295.1 CDS Rcas_3223 NC_009767.1 4193744 4194916 R PFAM: band 7 protein; KEGG: rrs:RoseRS_3922 band 7 protein; hypothetical protein complement(4193744..4194916) Roseiflexus castenholzii DSM 13941 5540721 YP_001433296.1 CDS Rcas_3224 NC_009767.1 4194917 4195870 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3921 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(4194917..4195870) Roseiflexus castenholzii DSM 13941 5540722 YP_001433297.1 CDS Rcas_3225 NC_009767.1 4196213 4197154 D TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: rrs:RoseRS_3920 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 4196213..4197154 Roseiflexus castenholzii DSM 13941 5540723 YP_001433298.1 CDS Rcas_3226 NC_009767.1 4197455 4197784 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_3919 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(4197455..4197784) Roseiflexus castenholzii DSM 13941 5540724 YP_001433299.1 CDS Rcas_3227 NC_009767.1 4197771 4198154 R PFAM: HEPN domain protein; KEGG: rrs:RoseRS_3918 HEPN domain protein; HEPN domain-containing protein complement(4197771..4198154) Roseiflexus castenholzii DSM 13941 5540725 YP_001433300.1 CDS Rcas_3228 NC_009767.1 4198165 4198785 R PFAM: protein of unknown function DUF37; KEGG: rrs:RoseRS_3917 protein of unknown function DUF37; hypothetical protein complement(4198165..4198785) Roseiflexus castenholzii DSM 13941 5540726 YP_001433301.1 CDS Rcas_3229 NC_009767.1 4198812 4199321 R TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_3916 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein complement(4198812..4199321) Roseiflexus castenholzii DSM 13941 5540727 YP_001433302.1 CDS Rcas_3230 NC_009767.1 4199728 4200261 R TIGRFAM: small GTP-binding protein; PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: rrs:RoseRS_3915 protein of unknown function, ATP binding; small GTP-binding protein complement(4199728..4200261) Roseiflexus castenholzii DSM 13941 5540728 YP_001433303.1 CDS Rcas_3231 NC_009767.1 4200275 4201030 R KEGG: rrs:RoseRS_3914 hypothetical protein; hypothetical protein complement(4200275..4201030) Roseiflexus castenholzii DSM 13941 5540729 YP_001433304.1 CDS Rcas_3232 NC_009767.1 4201053 4201604 R KEGG: rrs:RoseRS_3913 hypothetical protein; hypothetical protein complement(4201053..4201604) Roseiflexus castenholzii DSM 13941 5540730 YP_001433305.1 CDS Rcas_3233 NC_009767.1 4201787 4202158 R PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_3912 roadblock/LC7 family protein; roadblock/LC7 family protein complement(4201787..4202158) Roseiflexus castenholzii DSM 13941 5540731 YP_001433306.1 CDS Rcas_3234 NC_009767.1 4202549 4204078 D hypothetical protein 4202549..4204078 Roseiflexus castenholzii DSM 13941 5540732 YP_001433307.1 CDS Rcas_3235 NC_009767.1 4204026 4204886 R PFAM: Abortive infection protein; KEGG: rrs:RoseRS_1918 abortive infection protein; abortive infection protein complement(4204026..4204886) Roseiflexus castenholzii DSM 13941 5540733 YP_001433308.1 CDS Rcas_3236 NC_009767.1 4205224 4206666 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 4205224..4206666 Roseiflexus castenholzii DSM 13941 5540734 YP_001433309.1 CDS Rcas_3237 NC_009767.1 4206663 4207502 D PFAM: Abortive infection protein; KEGG: rrs:RoseRS_1880 abortive infection protein; abortive infection protein 4206663..4207502 Roseiflexus castenholzii DSM 13941 5540735 YP_001433310.1 CDS Rcas_3238 NC_009767.1 4207510 4208370 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1879 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4207510..4208370 Roseiflexus castenholzii DSM 13941 5540736 YP_001433311.1 CDS Rcas_3239 NC_009767.1 4208527 4209219 D KEGG: rrs:RoseRS_1878 hypothetical protein; hypothetical protein 4208527..4209219 Roseiflexus castenholzii DSM 13941 5540737 YP_001433312.1 CDS Rcas_3240 NC_009767.1 4209216 4210595 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1877 AAA ATPase, central domain protein; ATPase central domain-containing protein 4209216..4210595 Roseiflexus castenholzii DSM 13941 5540738 YP_001433313.1 CDS Rcas_3241 NC_009767.1 4210611 4212047 D PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_1876 type II secretion system protein E; type II secretion system protein E 4210611..4212047 Roseiflexus castenholzii DSM 13941 5540739 YP_001433314.1 CDS Rcas_3242 NC_009767.1 4213110 4213817 R PFAM: phosphoribosyltransferase; KEGG: rrs:RoseRS_1875 amidophosphoribosyltransferase-like protein; phosphoribosyltransferase complement(4213110..4213817) Roseiflexus castenholzii DSM 13941 5540740 YP_001433315.1 CDS Rcas_3243 NC_009767.1 4214230 4215156 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_2143 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4214230..4215156) Roseiflexus castenholzii DSM 13941 5540741 YP_001433316.1 CDS Rcas_3244 NC_009767.1 4216223 4218973 D PFAM: glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_0991 glycoside hydrolase family 2, sugar binding; glycoside hydrolase family protein 4216223..4218973 Roseiflexus castenholzii DSM 13941 5540742 YP_001433317.1 CDS Rcas_3246 NC_009767.1 4222340 4222828 D hypothetical protein 4222340..4222828 Roseiflexus castenholzii DSM 13941 5540744 YP_001433318.1 CDS Rcas_3247 NC_009767.1 4222936 4223664 D hypothetical protein 4222936..4223664 Roseiflexus castenholzii DSM 13941 5540745 YP_001433319.1 CDS Rcas_3249 NC_009767.1 4224101 4224421 D hypothetical protein 4224101..4224421 Roseiflexus castenholzii DSM 13941 5540747 YP_001433320.1 CDS Rcas_3250 NC_009767.1 4224438 4225493 D KEGG: hma:rrnB0181 hypothetical protein; hypothetical protein 4224438..4225493 Roseiflexus castenholzii DSM 13941 5540748 YP_001433321.1 CDS nrdR NC_009767.1 4227305 4227763 D PFAM: ATP-cone domain protein; KEGG: rrs:RoseRS_0989 ATP-cone domain protein; transcriptional regulator NrdR 4227305..4227763 Roseiflexus castenholzii DSM 13941 5540749 YP_001433322.1 CDS Rcas_3252 NC_009767.1 4227779 4228672 D PFAM: restriction endonuclease; KEGG: rrs:RoseRS_0988 restriction endonuclease; restriction endonuclease 4227779..4228672 Roseiflexus castenholzii DSM 13941 5540750 YP_001433323.1 CDS Rcas_3253 NC_009767.1 4228692 4229444 D TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0987 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 4228692..4229444 Roseiflexus castenholzii DSM 13941 5540751 YP_001433324.1 CDS Rcas_3254 NC_009767.1 4229517 4229867 D KEGG: rrs:RoseRS_0986 protein of unknown function DUF322; hypothetical protein 4229517..4229867 Roseiflexus castenholzii DSM 13941 5540752 YP_001433325.1 CDS Rcas_3255 NC_009767.1 4229860 4230288 D TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: rrs:RoseRS_0985 NusB antitermination factor; NusB antitermination factor 4229860..4230288 Roseiflexus castenholzii DSM 13941 5540753 YP_001433326.1 CDS acpP NC_009767.1 4230340 4230588 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 4230340..4230588 Roseiflexus castenholzii DSM 13941 5540754 YP_001433327.1 CDS Rcas_3257 NC_009767.1 4230719 4231717 D PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_0983 sec-independent translocation protein MttA/Hcf106; sec-independent translocation protein mttA/Hcf106 4230719..4231717 Roseiflexus castenholzii DSM 13941 5540755 YP_001433328.1 CDS Rcas_3258 NC_009767.1 4231730 4232665 D TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rrs:RoseRS_0982 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 4231730..4232665 Roseiflexus castenholzii DSM 13941 5540756 YP_001433329.1 CDS Rcas_3259 NC_009767.1 4232705 4233598 D PFAM: ribosomal RNA methyltransferase; KEGG: rrs:RoseRS_1981 ribosomal RNA methyltransferase; ribosomal RNA methyltransferase 4232705..4233598 Roseiflexus castenholzii DSM 13941 5540757 YP_001433330.1 CDS Rcas_3260 NC_009767.1 4234317 4235201 D PFAM: peptidase M48 Ste24p; KEGG: rrs:RoseRS_1982 peptidase M48, Ste24p; peptidase M48 Ste24p 4234317..4235201 Roseiflexus castenholzii DSM 13941 5540758 YP_001433331.1 CDS Rcas_3261 NC_009767.1 4235292 4236683 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_1983 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 4235292..4236683 Roseiflexus castenholzii DSM 13941 5540759 YP_001433332.1 CDS Rcas_3262 NC_009767.1 4236790 4237458 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_1984 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4236790..4237458 Roseiflexus castenholzii DSM 13941 5540760 YP_001433333.1 CDS Rcas_3263 NC_009767.1 4237479 4238447 R PFAM: protein of unknown function DUF897; KEGG: rrs:RoseRS_1985 protein of unknown function DUF897; hypothetical protein complement(4237479..4238447) Roseiflexus castenholzii DSM 13941 5540761 YP_001433334.1 CDS Rcas_3264 NC_009767.1 4238566 4239279 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1986 methyltransferase type 11; type 11 methyltransferase 4238566..4239279 Roseiflexus castenholzii DSM 13941 5540762 YP_001433335.1 CDS Rcas_3265 NC_009767.1 4239489 4239746 R KEGG: rrs:RoseRS_1987 hypothetical protein; hypothetical protein complement(4239489..4239746) Roseiflexus castenholzii DSM 13941 5540763 YP_001433336.1 CDS Rcas_3266 NC_009767.1 4239986 4241143 D KEGG: rrs:RoseRS_1988 tRNA-guanine transglycosylase, various specificities; TIGRFAM: tRNA-guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities 4239986..4241143 Roseiflexus castenholzii DSM 13941 5540764 YP_001433337.1 CDS Rcas_3267 NC_009767.1 4241525 4241758 R KEGG: rrs:RoseRS_1989 hypothetical protein; hypothetical protein complement(4241525..4241758) Roseiflexus castenholzii DSM 13941 5540765 YP_001433338.1 CDS Rcas_3268 NC_009767.1 4242288 4243862 D PFAM: Alkaline phosphatase; KEGG: rrs:RoseRS_1990 alkaline phosphatase; alkaline phosphatase 4242288..4243862 Roseiflexus castenholzii DSM 13941 5540766 YP_001433339.1 CDS Rcas_3269 NC_009767.1 4244033 4244857 R PFAM: molybdopterin binding domain; KEGG: rrs:RoseRS_1991 molybdopterin binding domain; molybdopterin binding domain-containing protein complement(4244033..4244857) Roseiflexus castenholzii DSM 13941 5540767 YP_001433340.1 CDS Rcas_3270 NC_009767.1 4245068 4245481 D hypothetical protein 4245068..4245481 Roseiflexus castenholzii DSM 13941 5540768 YP_001433341.1 CDS Rcas_3272 NC_009767.1 4246755 4248131 R PFAM: MOFRL domain protein; KEGG: rrs:RoseRS_1997 hydroxypyruvate reductase; hydroxypyruvate reductase complement(4246755..4248131) Roseiflexus castenholzii DSM 13941 5540770 YP_001433342.1 CDS Rcas_3273 NC_009767.1 4248128 4249939 R TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rrs:RoseRS_1998 oligoendopeptidase, PepF/M3 family; pepF/M3 family oligoendopeptidase complement(4248128..4249939) Roseiflexus castenholzii DSM 13941 5540771 YP_001433343.1 CDS Rcas_3274 NC_009767.1 4250336 4251586 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1999 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(4250336..4251586) Roseiflexus castenholzii DSM 13941 5540772 YP_001433344.1 CDS Rcas_3275 NC_009767.1 4251750 4253009 R PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1843 von Willebrand factor, type A; von Willebrand factor A complement(4251750..4253009) Roseiflexus castenholzii DSM 13941 5540773 YP_001433345.1 CDS Rcas_3276 NC_009767.1 4253607 4255034 D PFAM: Forkhead-associated protein; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_1844 protein kinase; serine/threonine kinase 4253607..4255034 Roseiflexus castenholzii DSM 13941 5540774 YP_001433346.1 CDS Rcas_3277 NC_009767.1 4255038 4255838 D TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: rrs:RoseRS_1845 phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 4255038..4255838 Roseiflexus castenholzii DSM 13941 5540775 YP_001433347.1 CDS Rcas_3278 NC_009767.1 4257337 4258167 R PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: rrs:RoseRS_1846 extracellular solute-binding protein, family 3; extracellular solute-binding protein complement(4257337..4258167) Roseiflexus castenholzii DSM 13941 5540776 YP_001433348.1 CDS Rcas_3279 NC_009767.1 4258350 4259012 D KEGG: rrs:RoseRS_1847 hypothetical protein; hypothetical protein 4258350..4259012 Roseiflexus castenholzii DSM 13941 5540777 YP_001433349.1 CDS Rcas_3280 NC_009767.1 4259222 4261204 D PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_1848 AAA ATPase, central domain protein; ATPase central domain-containing protein 4259222..4261204 Roseiflexus castenholzii DSM 13941 5540778 YP_001433350.1 CDS Rcas_3281 NC_009767.1 4261807 4262766 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: rrs:RoseRS_1853 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 4261807..4262766 Roseiflexus castenholzii DSM 13941 5540779 YP_001433351.1 CDS Rcas_3282 NC_009767.1 4262763 4263875 D PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: rrs:RoseRS_1852 nucleotidyl transferase; nucleotidyl transferase 4262763..4263875 Roseiflexus castenholzii DSM 13941 5540780 YP_001433352.1 CDS Rcas_3283 NC_009767.1 4263962 4265005 D KEGG: rrs:RoseRS_1851 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 4263962..4265005 Roseiflexus castenholzii DSM 13941 5540781 YP_001433353.1 CDS Rcas_3284 NC_009767.1 4265096 4265896 R KEGG: rrs:RoseRS_1850 hypothetical protein; hypothetical protein complement(4265096..4265896) Roseiflexus castenholzii DSM 13941 5540782 YP_001433354.1 CDS Rcas_3285 NC_009767.1 4266206 4266745 R KEGG: rrs:RoseRS_1849 hypothetical protein; hypothetical protein complement(4266206..4266745) Roseiflexus castenholzii DSM 13941 5540783 YP_001433355.1 CDS Rcas_3286 NC_009767.1 4267266 4268048 R KEGG: rrs:RoseRS_1854 hypothetical protein; hypothetical protein complement(4267266..4268048) Roseiflexus castenholzii DSM 13941 5540784 YP_001433356.1 CDS Rcas_3287 NC_009767.1 4268381 4268884 D PFAM: Ferritin Dps family protein; KEGG: rrs:RoseRS_1855 ferroxidase; ferroxidase 4268381..4268884 Roseiflexus castenholzii DSM 13941 5540785 YP_001433357.1 CDS Rcas_3288 NC_009767.1 4270864 4272114 R TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein DxTHG; KEGG: cyb:CYB_0843 CRISPR-associated protein, TM1812 family; CRISPR-associated TM1812 family protein complement(4270864..4272114) Roseiflexus castenholzii DSM 13941 5540786 YP_001433358.1 CDS Rcas_3289 NC_009767.1 4272123 4274222 R KEGG: rrs:RoseRS_1856 hypothetical protein; hypothetical protein complement(4272123..4274222) Roseiflexus castenholzii DSM 13941 5540787 YP_001433359.1 CDS Rcas_3290 NC_009767.1 4274685 4276784 R KEGG: rrs:RoseRS_1857 hypothetical protein; hypothetical protein complement(4274685..4276784) Roseiflexus castenholzii DSM 13941 5540788 YP_001433360.1 CDS Rcas_3291 NC_009767.1 4276781 4277446 R KEGG: rrs:RoseRS_1858 hypothetical protein; hypothetical protein complement(4276781..4277446) Roseiflexus castenholzii DSM 13941 5540789 YP_001433361.1 CDS Rcas_3292 NC_009767.1 4277443 4279311 R PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1859 protein of unknown function DUF324; hypothetical protein complement(4277443..4279311) Roseiflexus castenholzii DSM 13941 5540790 YP_001433362.1 CDS Rcas_3293 NC_009767.1 4279315 4281645 R PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_1860 protein of unknown function DUF324; hypothetical protein complement(4279315..4281645) Roseiflexus castenholzii DSM 13941 5540791 YP_001433363.1 CDS Rcas_3294 NC_009767.1 4281642 4283270 R KEGG: rrs:RoseRS_1861 hypothetical protein; hypothetical protein complement(4281642..4283270) Roseiflexus castenholzii DSM 13941 5540792 YP_001433364.1 CDS Rcas_3295 NC_009767.1 4283292 4285025 R KEGG: rrs:RoseRS_1862 hypothetical protein; hypothetical protein complement(4283292..4285025) Roseiflexus castenholzii DSM 13941 5540793 YP_001433365.1 CDS Rcas_3296 NC_009767.1 4285180 4286058 R PFAM: regulatory protein LuxR; KEGG: rrs:RoseRS_1863 response regulator receiver protein; LuxR family transcriptional regulator complement(4285180..4286058) Roseiflexus castenholzii DSM 13941 5540794 YP_001433366.1 CDS Rcas_3297 NC_009767.1 4286214 4287389 D KEGG: rrs:RoseRS_1864 hypothetical protein; hypothetical protein 4286214..4287389 Roseiflexus castenholzii DSM 13941 5540795 YP_001433367.1 CDS Rcas_3298 NC_009767.1 4287700 4289205 D TIGRFAM: CRISPR-associated CXXC_CXXC protein Cst1; KEGG: rrs:RoseRS_1865 CRISPR-associated CXXC_CXXC protein Cst1; CRISPR-associated Cst1 family protein 4287700..4289205 Roseiflexus castenholzii DSM 13941 5540796 YP_001433368.1 CDS Rcas_3299 NC_009767.1 4289294 4290385 D TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated regulatory protein, DevR family; KEGG: rrs:RoseRS_1866 CRISPR-associated autoregulator, DevR family; CRISPR-associated autoregulator DevR family protein 4289294..4290385 Roseiflexus castenholzii DSM 13941 5540797 YP_001433369.1 CDS Rcas_3300 NC_009767.1 4290395 4291132 D TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: rrs:RoseRS_1867 CRISPR-associated protein Cas5 family; CRISPR-associated Cas5 family protein 4290395..4291132 Roseiflexus castenholzii DSM 13941 5540798 YP_001433370.1 CDS Rcas_3301 NC_009767.1 4291110 4293449 D KEGG: rrs:RoseRS_1868 CRISPR-associated helicase Cas3; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; CRISPR-associated helicase Cas3 4291110..4293449 Roseiflexus castenholzii DSM 13941 5540799 YP_001433371.1 CDS Rcas_3302 NC_009767.1 4293456 4294412 D KEGG: rrs:RoseRS_1869 hypothetical protein; hypothetical protein 4293456..4294412 Roseiflexus castenholzii DSM 13941 5540800 YP_001433372.1 CDS Rcas_3303 NC_009767.1 4295005 4296021 D TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: rrs:RoseRS_1870 CRISPR-associated protein Cas1; CRISPR-associated Cas1 family protein 4295005..4296021 Roseiflexus castenholzii DSM 13941 5540801 YP_001433373.1 CDS Rcas_3304 NC_009767.1 4296101 4296358 D TIGRFAM: CRISPR-associated protein Cas2; KEGG: rrs:RoseRS_1871 CRISPR-associated protein Cas2; CRISPR-associated Cas2 family protein 4296101..4296358 Roseiflexus castenholzii DSM 13941 5540802 YP_001433374.1 CDS Rcas_3305 NC_009767.1 4296351 4296947 D TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: rrs:RoseRS_1872 CRISPR-associated protein Cas4; CRISPR-associated Cas4 family protein 4296351..4296947 Roseiflexus castenholzii DSM 13941 5540803 YP_001433375.1 CDS Rcas_3306 NC_009767.1 4313548 4314819 R KEGG: rrs:RoseRS_3875 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(4313548..4314819) Roseiflexus castenholzii DSM 13941 5540804 YP_001433376.1 CDS Rcas_3307 NC_009767.1 4315115 4318126 D KEGG: rrs:RoseRS_3876 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; CHASE4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor hybrid histidine kinase 4315115..4318126 Roseiflexus castenholzii DSM 13941 5540805 YP_001433377.1 CDS Rcas_3308 NC_009767.1 4318147 4318539 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_3877 response regulator receiver protein; response regulator receiver protein 4318147..4318539 Roseiflexus castenholzii DSM 13941 5540806 YP_001433378.1 CDS Rcas_3309 NC_009767.1 4318599 4321301 D KEGG: rrs:RoseRS_3878 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4318599..4321301 Roseiflexus castenholzii DSM 13941 5540807 YP_001433379.1 CDS Rcas_3310 NC_009767.1 4321333 4322139 D KEGG: rrs:RoseRS_3879 hypothetical protein; hypothetical protein 4321333..4322139 Roseiflexus castenholzii DSM 13941 5540808 YP_001433380.1 CDS Rcas_3311 NC_009767.1 4322170 4322511 R KEGG: rrs:RoseRS_3881 hypothetical protein; hypothetical protein complement(4322170..4322511) Roseiflexus castenholzii DSM 13941 5540809 YP_001433381.1 CDS Rcas_3312 NC_009767.1 4322582 4323610 D PFAM: peptidase M19 renal dipeptidase; KEGG: rrs:RoseRS_3883 membrane dipeptidase; membrane dipeptidase 4322582..4323610 Roseiflexus castenholzii DSM 13941 5540810 YP_001433382.1 CDS Rcas_3313 NC_009767.1 4323768 4324556 D PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_3884 nucleotidyl transferase; nucleotidyl transferase 4323768..4324556 Roseiflexus castenholzii DSM 13941 5540811 YP_001433383.1 CDS Rcas_3314 NC_009767.1 4325999 4327501 R KEGG: rrs:RoseRS_3885 hypothetical protein; hypothetical protein complement(4325999..4327501) Roseiflexus castenholzii DSM 13941 5540812 YP_001433384.1 CDS Rcas_3315 NC_009767.1 4327693 4329105 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: rrs:RoseRS_3886 phosphate butyryltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 4327693..4329105 Roseiflexus castenholzii DSM 13941 5540813 YP_001433385.1 CDS Rcas_3316 NC_009767.1 4329136 4329492 R KEGG: rrs:RoseRS_3887 hypothetical protein; hypothetical protein complement(4329136..4329492) Roseiflexus castenholzii DSM 13941 5540814 YP_001433386.1 CDS Rcas_3317 NC_009767.1 4331550 4332833 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3888 major facilitator superfamily MFS_1; major facilitator transporter 4331550..4332833 Roseiflexus castenholzii DSM 13941 5540815 YP_001433387.1 CDS Rcas_3318 NC_009767.1 4332836 4333426 D PFAM: protein of unknown function DUF45; KEGG: rrs:RoseRS_3889 protein of unknown function DUF45; hypothetical protein 4332836..4333426 Roseiflexus castenholzii DSM 13941 5540816 YP_001433388.1 CDS Rcas_3319 NC_009767.1 4333498 4334787 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_3989 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 4333498..4334787 Roseiflexus castenholzii DSM 13941 5540817 YP_001433389.1 CDS Rcas_3320 NC_009767.1 4334784 4335197 D KEGG: rrs:RoseRS_3988 hypothetical protein; hypothetical protein 4334784..4335197 Roseiflexus castenholzii DSM 13941 5540818 YP_001433390.1 CDS Rcas_3322 NC_009767.1 4335437 4336129 R PFAM: iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_3986 FeoA family protein; DtxR family iron dependent repressor complement(4335437..4336129) Roseiflexus castenholzii DSM 13941 5540820 YP_001433391.1 CDS Rcas_3323 NC_009767.1 4336197 4337285 D KEGG: rrs:RoseRS_3985 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; metalloendopeptidase 4336197..4337285 Roseiflexus castenholzii DSM 13941 5540821 YP_001433392.1 CDS Rcas_3324 NC_009767.1 4337611 4338345 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_3984 methyltransferase type 11; type 11 methyltransferase 4337611..4338345 Roseiflexus castenholzii DSM 13941 5540822 YP_001433393.1 CDS Rcas_3325 NC_009767.1 4338358 4339332 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rrs:RoseRS_3983 protein-export membrane protein SecF; protein-export membrane protein SecF complement(4338358..4339332) Roseiflexus castenholzii DSM 13941 5540823 YP_001433394.1 CDS Rcas_3326 NC_009767.1 4339353 4340777 R TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rrs:RoseRS_3982 protein-export membrane protein SecD; protein-export membrane protein SecD complement(4339353..4340777) Roseiflexus castenholzii DSM 13941 5540824 YP_001433395.1 CDS Rcas_3327 NC_009767.1 4341001 4341768 R PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_3981 DsbA oxidoreductase; DSBA oxidoreductase complement(4341001..4341768) Roseiflexus castenholzii DSM 13941 5540825 YP_001433396.1 CDS Rcas_3328 NC_009767.1 4342132 4345332 D KEGG: rrs:RoseRS_3980 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; non-specific serine/threonine protein kinase 4342132..4345332 Roseiflexus castenholzii DSM 13941 5540826 YP_001433397.1 CDS Rcas_3329 NC_009767.1 4345325 4346686 D PFAM: peptidase M14 carboxypeptidase A; KEGG: rrs:RoseRS_3979 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 4345325..4346686 Roseiflexus castenholzii DSM 13941 5540827 YP_001433398.1 CDS Rcas_3330 NC_009767.1 4346693 4347220 D PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1012 phosphoglycerate mutase; phosphoglycerate mutase 4346693..4347220 Roseiflexus castenholzii DSM 13941 5540828 YP_001433399.1 CDS Rcas_3331 NC_009767.1 4347661 4348410 D KEGG: rrs:RoseRS_1011 hypothetical protein; hypothetical protein 4347661..4348410 Roseiflexus castenholzii DSM 13941 5540829 YP_001433400.1 CDS Rcas_3332 NC_009767.1 4348343 4349236 R PFAM: HhH-GPD family protein; KEGG: rrs:RoseRS_1010 HhH-GPD family protein; HhH-GPD family protein complement(4348343..4349236) Roseiflexus castenholzii DSM 13941 5540830 YP_001433401.1 CDS Rcas_3333 NC_009767.1 4349233 4350789 R KEGG: rrs:RoseRS_1009 hypothetical protein; hypothetical protein complement(4349233..4350789) Roseiflexus castenholzii DSM 13941 5540831 YP_001433402.1 CDS rpmG NC_009767.1 4350878 4351042 R in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 complement(4350878..4351042) Roseiflexus castenholzii DSM 13941 5540832 YP_001433403.1 CDS Rcas_3335 NC_009767.1 4351226 4352764 D PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_1007 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 4351226..4352764 Roseiflexus castenholzii DSM 13941 5540833 YP_001433404.1 CDS Rcas_3336 NC_009767.1 4352886 4353665 R TIGRFAM: thioredoxin; PFAM: glutaredoxin 2; Redoxin domain protein; Thioredoxin domain; KEGG: rrs:RoseRS_1006 thioredoxin; thioredoxin complement(4352886..4353665) Roseiflexus castenholzii DSM 13941 5540834 YP_001433405.1 CDS Rcas_3337 NC_009767.1 4353742 4355955 R KEGG: rrs:RoseRS_3896 hypothetical protein; hypothetical protein complement(4353742..4355955) Roseiflexus castenholzii DSM 13941 5540835 YP_001433406.1 CDS Rcas_3338 NC_009767.1 4356330 4356812 R KEGG: rrs:RoseRS_3895 hypothetical protein; hypothetical protein complement(4356330..4356812) Roseiflexus castenholzii DSM 13941 5540836 YP_001433407.1 CDS Rcas_3339 NC_009767.1 4356918 4358135 D PFAM: conserved hypothetical protein; (Uracil-5)-methyltransferase; KEGG: rrs:RoseRS_3894 (uracil-5)-methyltransferase; (uracil-5)-methyltransferase 4356918..4358135 Roseiflexus castenholzii DSM 13941 5540837 YP_001433408.1 CDS Rcas_3340 NC_009767.1 4358681 4360153 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3893 protein kinase; serine/threonine protein kinase 4358681..4360153 Roseiflexus castenholzii DSM 13941 5540838 YP_001433409.1 CDS Rcas_3341 NC_009767.1 4360428 4360898 D KEGG: rrs:RoseRS_3891 hypothetical protein; hypothetical protein 4360428..4360898 Roseiflexus castenholzii DSM 13941 5540839 YP_001433410.1 CDS Rcas_3342 NC_009767.1 4360911 4361339 R KEGG: rrs:RoseRS_3890 hypothetical protein; hypothetical protein complement(4360911..4361339) Roseiflexus castenholzii DSM 13941 5540840 YP_001433411.1 CDS Rcas_3343 NC_009767.1 4362230 4363141 R PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_3990 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase complement(4362230..4363141) Roseiflexus castenholzii DSM 13941 5540842 YP_001433412.1 CDS Rcas_3344 NC_009767.1 4363320 4364681 D KEGG: rrs:RoseRS_3991 hypothetical protein; hypothetical protein 4363320..4364681 Roseiflexus castenholzii DSM 13941 5540843 YP_001433413.1 CDS Rcas_3345 NC_009767.1 4364674 4366668 D KEGG: rrs:RoseRS_3992 hypothetical protein; hypothetical protein 4364674..4366668 Roseiflexus castenholzii DSM 13941 5540844 YP_001433414.1 CDS Rcas_3346 NC_009767.1 4366773 4367285 R hypothetical protein complement(4366773..4367285) Roseiflexus castenholzii DSM 13941 5540845 YP_001433415.1 CDS Rcas_3347 NC_009767.1 4367337 4369226 R PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mxa:MXAN_0560 penicillin-resistant dd-carboxypeptidase; peptidoglycan binding domain-containing protein complement(4367337..4369226) Roseiflexus castenholzii DSM 13941 5540846 YP_001433416.1 CDS Rcas_3348 NC_009767.1 4369623 4371668 D KEGG: rrs:RoseRS_3993 PKD domain containing protein; PKD domain-containing protein 4369623..4371668 Roseiflexus castenholzii DSM 13941 5540847 YP_001433417.1 CDS Rcas_3349 NC_009767.1 4371865 4374093 D KEGG: rrs:RoseRS_3994 hypothetical protein; hypothetical protein 4371865..4374093 Roseiflexus castenholzii DSM 13941 5540848 YP_001433418.1 CDS Rcas_3350 NC_009767.1 4374099 4374587 R KEGG: rrs:RoseRS_3995 hypothetical protein; hypothetical protein complement(4374099..4374587) Roseiflexus castenholzii DSM 13941 5540849 YP_001433419.1 CDS Rcas_3351 NC_009767.1 4375206 4377218 R KEGG: rrs:RoseRS_4063 hypothetical protein; hypothetical protein complement(4375206..4377218) Roseiflexus castenholzii DSM 13941 5540850 YP_001433420.1 CDS Rcas_3352 NC_009767.1 4377230 4377601 R KEGG: rrs:RoseRS_4062 hypothetical protein; hypothetical protein complement(4377230..4377601) Roseiflexus castenholzii DSM 13941 5540851 YP_001433421.1 CDS Rcas_3353 NC_009767.1 4377611 4377973 R KEGG: rrs:RoseRS_4061 hypothetical protein; hypothetical protein complement(4377611..4377973) Roseiflexus castenholzii DSM 13941 5540852 YP_001433422.1 CDS Rcas_3354 NC_009767.1 4378400 4380580 R KEGG: rrs:RoseRS_4060 hypothetical protein; hypothetical protein complement(4378400..4380580) Roseiflexus castenholzii DSM 13941 5540853 YP_001433423.1 CDS Rcas_3355 NC_009767.1 4380902 4382125 R KEGG: rrs:RoseRS_4059 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(4380902..4382125) Roseiflexus castenholzii DSM 13941 5540854 YP_001433424.1 CDS Rcas_3356 NC_009767.1 4382517 4383725 R catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase complement(4382517..4383725) Roseiflexus castenholzii DSM 13941 5540855 YP_001433425.1 CDS Rcas_3357 NC_009767.1 4383722 4387060 R TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: rrs:RoseRS_4057 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(4383722..4387060) Roseiflexus castenholzii DSM 13941 5540856 YP_001433426.1 CDS Rcas_3358 NC_009767.1 4387138 4387611 R PFAM: histidine kinase A domain protein; KEGG: rrs:RoseRS_4056 histidine kinase A domain protein; histidine kinase A domain-containing protein complement(4387138..4387611) Roseiflexus castenholzii DSM 13941 5540857 YP_001433427.1 CDS Rcas_3359 NC_009767.1 4387729 4388889 R TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: rrs:RoseRS_4055 carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(4387729..4388889) Roseiflexus castenholzii DSM 13941 5540858 YP_001433428.1 CDS Rcas_3360 NC_009767.1 4388925 4389440 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4054 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(4388925..4389440) Roseiflexus castenholzii DSM 13941 5540859 YP_001433429.1 CDS Rcas_3361 NC_009767.1 4389437 4390216 R KEGG: rrs:RoseRS_4053 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(4389437..4390216) Roseiflexus castenholzii DSM 13941 5540860 YP_001433430.1 CDS Rcas_3362 NC_009767.1 4391237 4392247 R KEGG: rrs:RoseRS_4052 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase complement(4391237..4392247) Roseiflexus castenholzii DSM 13941 5540861 YP_001433431.1 CDS Rcas_3363 NC_009767.1 4392649 4393734 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 4392649..4393734 Roseiflexus castenholzii DSM 13941 5540862 YP_001433432.1 CDS Rcas_3364 NC_009767.1 4393749 4395866 D PFAM: ADP-ribosylation/Crystallin J1; KEGG: rrs:RoseRS_2215 ADP-ribosylation/crystallin J1; ADP-ribosylation/crystallin J1 4393749..4395866 Roseiflexus castenholzii DSM 13941 5540863 YP_001433433.1 CDS gidB NC_009767.1 4395875 4396579 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(4395875..4396579) Roseiflexus castenholzii DSM 13941 5540864 YP_001433434.1 CDS Rcas_3366 NC_009767.1 4396603 4397202 R KEGG: rrs:RoseRS_2217 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase complement(4396603..4397202) Roseiflexus castenholzii DSM 13941 5540865 YP_001433435.1 CDS Rcas_3367 NC_009767.1 4397199 4397450 R KEGG: rrs:RoseRS_2218 hypothetical protein; hypothetical protein complement(4397199..4397450) Roseiflexus castenholzii DSM 13941 5540866 YP_001433436.1 CDS Rcas_3368 NC_009767.1 4397456 4398409 R KEGG: rrs:RoseRS_2219 hypothetical protein; hypothetical protein complement(4397456..4398409) Roseiflexus castenholzii DSM 13941 5540867 YP_001433437.1 CDS Rcas_3369 NC_009767.1 4398428 4398991 R KEGG: rrs:RoseRS_2220 hypothetical protein; hypothetical protein complement(4398428..4398991) Roseiflexus castenholzii DSM 13941 5540868 YP_001433438.1 CDS Rcas_3370 NC_009767.1 4399222 4400142 R PFAM: band 7 protein; KEGG: rrs:RoseRS_2221 band 7 protein; hypothetical protein complement(4399222..4400142) Roseiflexus castenholzii DSM 13941 5540869 YP_001433439.1 CDS Rcas_3371 NC_009767.1 4400139 4401128 R PFAM: band 7 protein; KEGG: rrs:RoseRS_2222 band 7 protein; hypothetical protein complement(4400139..4401128) Roseiflexus castenholzii DSM 13941 5540870 YP_001433440.1 CDS Rcas_3372 NC_009767.1 4401289 4402068 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4401289..4402068 Roseiflexus castenholzii DSM 13941 5540871 YP_001433441.1 CDS Rcas_3373 NC_009767.1 4402109 4402846 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4402109..4402846 Roseiflexus castenholzii DSM 13941 5540872 YP_001433442.1 CDS Rcas_3374 NC_009767.1 4402887 4403666 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4402887..4403666 Roseiflexus castenholzii DSM 13941 5540873 YP_001433443.1 CDS Rcas_3375 NC_009767.1 4403707 4404444 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2223 protein of unknown function DUF820; hypothetical protein 4403707..4404444 Roseiflexus castenholzii DSM 13941 5540874 YP_001433444.1 CDS Rcas_3376 NC_009767.1 4404431 4406410 D PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_2224 UvrD/REP helicase; UvrD/REP helicase 4404431..4406410 Roseiflexus castenholzii DSM 13941 5540875 YP_001433445.1 CDS Rcas_3377 NC_009767.1 4406893 4407714 D PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_2225 alpha/beta hydrolase fold; alpha/beta hydrolase 4406893..4407714 Roseiflexus castenholzii DSM 13941 5540876 YP_001433446.1 CDS Rcas_3378 NC_009767.1 4407778 4408215 D KEGG: rrs:RoseRS_2226 hypothetical protein; hypothetical protein 4407778..4408215 Roseiflexus castenholzii DSM 13941 5540877 YP_001433447.1 CDS Rcas_3379 NC_009767.1 4408234 4408437 D hypothetical protein 4408234..4408437 Roseiflexus castenholzii DSM 13941 5540878 YP_001433448.1 CDS Rcas_3380 NC_009767.1 4408434 4408691 D hypothetical protein 4408434..4408691 Roseiflexus castenholzii DSM 13941 5540879 YP_001433449.1 CDS Rcas_3381 NC_009767.1 4408935 4409804 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_2229 protein kinase; serine/threonine protein kinase 4408935..4409804 Roseiflexus castenholzii DSM 13941 5540880 YP_001433450.1 CDS Rcas_3382 NC_009767.1 4410002 4411498 R KEGG: rrs:RoseRS_2230 proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit N complement(4410002..4411498) Roseiflexus castenholzii DSM 13941 5540881 YP_001433451.1 CDS Rcas_3383 NC_009767.1 4411513 4413036 R KEGG: rrs:RoseRS_2231 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M complement(4411513..4413036) Roseiflexus castenholzii DSM 13941 5540882 YP_001433452.1 CDS Rcas_3384 NC_009767.1 4413042 4415006 R KEGG: rrs:RoseRS_2232 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit L complement(4413042..4415006) Roseiflexus castenholzii DSM 13941 5540883 YP_001433453.1 CDS Rcas_3385 NC_009767.1 4415075 4415377 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rrs:RoseRS_2233 NADH-ubiquinone oxidoreductase, chain 4L; NADH-ubiquinone oxidoreductase chain 4L complement(4415075..4415377) Roseiflexus castenholzii DSM 13941 5540884 YP_001433454.1 CDS Rcas_3386 NC_009767.1 4415548 4416060 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: rrs:RoseRS_2234 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(4415548..4416060) Roseiflexus castenholzii DSM 13941 5540885 YP_001433455.1 CDS Rcas_3387 NC_009767.1 4416074 4416571 R TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_2235 NADH-quinone oxidoreductase, chain I; NADH-quinone oxidoreductase subunit I complement(4416074..4416571) Roseiflexus castenholzii DSM 13941 5540886 YP_001433456.1 CDS Rcas_3388 NC_009767.1 4416613 4417785 R PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: rrs:RoseRS_2236 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(4416613..4417785) Roseiflexus castenholzii DSM 13941 5540887 YP_001433457.1 CDS Rcas_3389 NC_009767.1 4417782 4420553 R TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: ferredoxin; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rrs:RoseRS_2237 NADH-quinone oxidoreductase, chain G; NADH-quinone oxidoreductase subunit G complement(4417782..4420553) Roseiflexus castenholzii DSM 13941 5540888 YP_001433458.1 CDS Rcas_3390 NC_009767.1 4420565 4421158 R KEGG: ava:Ava_2609 protein of unknown function DUF820; response regulator receiver protein complement(4420565..4421158) Roseiflexus castenholzii DSM 13941 5540889 YP_001433459.1 CDS Rcas_3391 NC_009767.1 4421168 4422523 R KEGG: rrs:RoseRS_2238 NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(4421168..4422523) Roseiflexus castenholzii DSM 13941 5540890 YP_001433460.1 CDS Rcas_3392 NC_009767.1 4422670 4423890 D KEGG: rrs:RoseRS_2239 hypothetical protein; hypothetical protein 4422670..4423890 Roseiflexus castenholzii DSM 13941 5540891 YP_001433461.1 CDS solA NC_009767.1 4423906 4425051 D catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 4423906..4425051 Roseiflexus castenholzii DSM 13941 5540892 YP_001433462.1 CDS Rcas_3394 NC_009767.1 4425032 4426891 R KEGG: rrs:RoseRS_2240 hypothetical protein; hypothetical protein complement(4425032..4426891) Roseiflexus castenholzii DSM 13941 5540893 YP_001433463.1 CDS Rcas_3395 NC_009767.1 4427098 4428228 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein complement(4427098..4428228) Roseiflexus castenholzii DSM 13941 5540894 YP_001433464.1 CDS Rcas_3396 NC_009767.1 4428678 4429340 R PFAM: adenylate kinase; KEGG: rrs:RoseRS_1214 adenylate kinase; adenylate kinase complement(4428678..4429340) Roseiflexus castenholzii DSM 13941 5540895 YP_001433465.1 CDS Rcas_3397 NC_009767.1 4429366 4430061 R PFAM: Translin; KEGG: rrs:RoseRS_1215 translin; haloacid dehalogenase complement(4429366..4430061) Roseiflexus castenholzii DSM 13941 5540896 YP_001433466.1 CDS Rcas_3398 NC_009767.1 4430214 4432010 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1216 ABC transporter related; ABC transporter-like protein 4430214..4432010 Roseiflexus castenholzii DSM 13941 5540897 YP_001433467.1 CDS Rcas_3399 NC_009767.1 4432250 4433230 D PFAM: deoxyhypusine synthase; KEGG: rrs:RoseRS_1218 deoxyhypusine synthase; deoxyhypusine synthase 4432250..4433230 Roseiflexus castenholzii DSM 13941 5540898 YP_001433468.1 CDS Rcas_3400 NC_009767.1 4433208 4433450 D hypothetical protein 4433208..4433450 Roseiflexus castenholzii DSM 13941 5540899 YP_001433469.1 CDS Rcas_3401 NC_009767.1 4433451 4433738 D hypothetical protein 4433451..4433738 Roseiflexus castenholzii DSM 13941 5540900 YP_001433470.1 CDS Rcas_3402 NC_009767.1 4434144 4434323 D hypothetical protein 4434144..4434323 Roseiflexus castenholzii DSM 13941 5540901 YP_001433471.1 CDS Rcas_3403 NC_009767.1 4434535 4434822 R hypothetical protein complement(4434535..4434822) Roseiflexus castenholzii DSM 13941 5540902 YP_001433472.1 CDS Rcas_3404 NC_009767.1 4435090 4435701 D PFAM: peptidase S14 ClpP; KEGG: rrs:RoseRS_1553 endopeptidase Clp; endopeptidase Clp 4435090..4435701 Roseiflexus castenholzii DSM 13941 5540903 YP_001433473.1 CDS Rcas_3405 NC_009767.1 4435704 4436777 R PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1554 alpha/beta hydrolase fold; alpha/beta hydrolase complement(4435704..4436777) Roseiflexus castenholzii DSM 13941 5540904 YP_001433474.1 CDS Rcas_3406 NC_009767.1 4436855 4437634 D KEGG: rrs:RoseRS_1555 enoyl-(acyl-carrier-protein)-like protein; enoyl-(acyl-carrier-protein)-like protein 4436855..4437634 Roseiflexus castenholzii DSM 13941 5540905 YP_001433475.1 CDS Rcas_3407 NC_009767.1 4437618 4438841 R PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_1556 protein of unknown function UPF0118; hypothetical protein complement(4437618..4438841) Roseiflexus castenholzii DSM 13941 5540906 YP_001433476.1 CDS Rcas_3408 NC_009767.1 4439176 4439439 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(4439176..4439439) Roseiflexus castenholzii DSM 13941 5540907 YP_001433477.1 CDS Rcas_3409 NC_009767.1 4439508 4440320 R TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rrs:RoseRS_1558 septum site-determining protein MinD; septum site-determining protein MinD complement(4439508..4440320) Roseiflexus castenholzii DSM 13941 5540908 YP_001433478.1 CDS Rcas_3410 NC_009767.1 4440361 4441038 R TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: rrs:RoseRS_1559 septum site-determining protein MinC; septum site-determining protein MinC complement(4440361..4441038) Roseiflexus castenholzii DSM 13941 5540909 YP_001433479.1 CDS Rcas_3411 NC_009767.1 4441150 4442316 R PFAM: aminotransferase class I and II; KEGG: rrs:RoseRS_1560 aminotransferase, class I and II; class I/II aminotransferase complement(4441150..4442316) Roseiflexus castenholzii DSM 13941 5540910 YP_001433480.1 CDS Rcas_3412 NC_009767.1 4442413 4443648 D KEGG: rrs:RoseRS_1561 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 4442413..4443648 Roseiflexus castenholzii DSM 13941 5540911 YP_001433481.1 CDS Rcas_3413 NC_009767.1 4443656 4444765 D PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: rrs:RoseRS_1562 PBS lyase heat domain protein repeat-containing protein; PBS lyase 4443656..4444765 Roseiflexus castenholzii DSM 13941 5540912 YP_001433482.1 CDS Rcas_3414 NC_009767.1 4444784 4445893 D PFAM: aminodeoxychorismate lyase; KEGG: rrs:RoseRS_1563 aminodeoxychorismate lyase; aminodeoxychorismate lyase 4444784..4445893 Roseiflexus castenholzii DSM 13941 5540913 YP_001433483.1 CDS Rcas_3415 NC_009767.1 4445878 4446729 D TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: rrs:RoseRS_1564 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 4445878..4446729 Roseiflexus castenholzii DSM 13941 5540914 YP_001433484.1 CDS Rcas_3416 NC_009767.1 4446741 4447505 D PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: rrs:RoseRS_1565 peptidase A24A domain protein; peptidase A24A domain-containing protein 4446741..4447505 Roseiflexus castenholzii DSM 13941 5540915 YP_001433485.1 CDS Rcas_3417 NC_009767.1 4447620 4451195 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rrs:RoseRS_1566 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 4447620..4451195 Roseiflexus castenholzii DSM 13941 5540916 YP_001433486.1 CDS Rcas_3418 NC_009767.1 4452705 4454066 R TIGRFAM: conserved repeat domain; KEGG: rrs:RoseRS_1620 hypothetical protein; hypothetical protein complement(4452705..4454066) Roseiflexus castenholzii DSM 13941 5540917 YP_001433487.1 CDS Rcas_3419 NC_009767.1 4454095 4456794 R KEGG: rrs:RoseRS_1619 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(4454095..4456794) Roseiflexus castenholzii DSM 13941 5540918 YP_001433488.1 CDS Rcas_3420 NC_009767.1 4457044 4459203 R KEGG: rrs:RoseRS_1618 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase complement(4457044..4459203) Roseiflexus castenholzii DSM 13941 5540919 YP_001433489.1 CDS Rcas_3421 NC_009767.1 4459336 4460748 R PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: rrs:RoseRS_1617 UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase complement(4459336..4460748) Roseiflexus castenholzii DSM 13941 5540920 YP_001433490.1 CDS Rcas_3422 NC_009767.1 4460780 4462168 R KEGG: rrs:RoseRS_1616 hypothetical protein; FHA domain-containing protein complement(4460780..4462168) Roseiflexus castenholzii DSM 13941 5540921 YP_001433491.1 CDS Rcas_3423 NC_009767.1 4462226 4464523 R TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rrs:RoseRS_1615 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase complement(4462226..4464523) Roseiflexus castenholzii DSM 13941 5540922 YP_001433492.1 CDS Rcas_3424 NC_009767.1 4464685 4465611 R TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_1614 RarD protein, DMT superfamily transporter; transporter DMT superfamily protein complement(4464685..4465611) Roseiflexus castenholzii DSM 13941 5540923 YP_001433493.1 CDS Rcas_3425 NC_009767.1 4465747 4465995 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mem:Memar_0224 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4465747..4465995 Roseiflexus castenholzii DSM 13941 5540924 YP_001433494.1 CDS Rcas_3426 NC_009767.1 4465992 4466411 D KEGG: rrs:RoseRS_0757 hypothetical protein; hypothetical protein 4465992..4466411 Roseiflexus castenholzii DSM 13941 5540925 YP_001433495.1 CDS Rcas_3427 NC_009767.1 4466418 4467089 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rrs:RoseRS_0292 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator complement(4466418..4467089) Roseiflexus castenholzii DSM 13941 5540926 YP_001433496.1 CDS Rcas_3428 NC_009767.1 4467978 4468406 D PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rrs:RoseRS_1613 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidyl-prolyl cis-trans isomerase 4467978..4468406 Roseiflexus castenholzii DSM 13941 5540927 YP_001433497.1 CDS Rcas_3429 NC_009767.1 4468782 4471445 D PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_1612 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase 4468782..4471445 Roseiflexus castenholzii DSM 13941 5540928 YP_001433498.1 CDS Rcas_3430 NC_009767.1 4471569 4473641 D PFAM: cytochrome d1 heme region; KEGG: hch:HCH_04416 cytochrome c, mono- and diheme variants; hydroxylamine reductase 4471569..4473641 Roseiflexus castenholzii DSM 13941 5540929 YP_001433499.1 CDS Rcas_3431 NC_009767.1 4473996 4475009 R TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_1611 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(4473996..4475009) Roseiflexus castenholzii DSM 13941 5540930 YP_001433500.1 CDS Rcas_3432 NC_009767.1 4475230 4478124 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: rrs:RoseRS_1610 N-acetylmuramoyl-L-alanine amidase, family 2; N-acetylmuramoyl-L-alanine amidase complement(4475230..4478124) Roseiflexus castenholzii DSM 13941 5540931 YP_001433501.1 CDS Rcas_3433 NC_009767.1 4478717 4480201 D PFAM: ComEC/Rec2-related protein; KEGG: rrs:RoseRS_1609 ComEC/Rec2-related protein; ComEC/Rec2-like protein 4478717..4480201 Roseiflexus castenholzii DSM 13941 5540932 YP_001433502.1 CDS Rcas_3434 NC_009767.1 4480215 4482467 R PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rrs:RoseRS_1510 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(4480215..4482467) Roseiflexus castenholzii DSM 13941 5540933 YP_001433503.1 CDS Rcas_3435 NC_009767.1 4483035 4483736 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2937 protein of unknown function DUF820; hypothetical protein complement(4483035..4483736) Roseiflexus castenholzii DSM 13941 5540934 YP_001433504.1 CDS Rcas_3436 NC_009767.1 4484124 4484957 R PFAM: LmbE family protein; KEGG: rrs:RoseRS_1608 LmbE family protein; LmbE family protein complement(4484124..4484957) Roseiflexus castenholzii DSM 13941 5540935 YP_001433505.1 CDS Rcas_3437 NC_009767.1 4484968 4486968 R KEGG: rrs:RoseRS_1607 hypothetical protein; hypothetical protein complement(4484968..4486968) Roseiflexus castenholzii DSM 13941 5540936 YP_001433506.1 CDS Rcas_3438 NC_009767.1 4487433 4487690 R KEGG: rrs:RoseRS_1606 hypothetical protein; hypothetical protein complement(4487433..4487690) Roseiflexus castenholzii DSM 13941 5540937 YP_001433507.1 CDS Rcas_3439 NC_009767.1 4488170 4490680 D KEGG: rrs:RoseRS_1605 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 4488170..4490680 Roseiflexus castenholzii DSM 13941 5540938 YP_001433508.1 CDS Rcas_3440 NC_009767.1 4490680 4491612 D PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: rrs:RoseRS_1604 aminoglycoside/hydroxyurea antibiotic resistance kinase; aminoglycoside/hydroxyurea antibiotic resistance kinase 4490680..4491612 Roseiflexus castenholzii DSM 13941 5540939 YP_001433509.1 CDS Rcas_3441 NC_009767.1 4491609 4492652 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_1603 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4491609..4492652 Roseiflexus castenholzii DSM 13941 5540940 YP_001433510.1 CDS Rcas_3442 NC_009767.1 4492677 4493531 D PFAM: SEC-C motif domain protein; KEGG: rrs:RoseRS_1602 sec-C motif domain protein; SecC motif-containing protein 4492677..4493531 Roseiflexus castenholzii DSM 13941 5540941 YP_001433511.1 CDS Rcas_3443 NC_009767.1 4495036 4497003 D KEGG: rrs:RoseRS_1601 hypothetical protein; hypothetical protein 4495036..4497003 Roseiflexus castenholzii DSM 13941 5540942 YP_001433512.1 CDS Rcas_3444 NC_009767.1 4497290 4497853 D KEGG: rrs:RoseRS_1600 CopG domain protein DNA-binding domain protein; CopG/DNA-binding domain-containing protein 4497290..4497853 Roseiflexus castenholzii DSM 13941 5540943 YP_001433513.1 CDS Rcas_3445 NC_009767.1 4499248 4499919 D PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_1599 phosphoglycerate mutase; phosphoglycerate mutase 4499248..4499919 Roseiflexus castenholzii DSM 13941 5540944 YP_001433514.1 CDS Rcas_3446 NC_009767.1 4501580 4503349 R PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_1597 allergen V5/TPX-1 family protein; SCP-like extracellular complement(4501580..4503349) Roseiflexus castenholzii DSM 13941 5540945 YP_001433515.1 CDS Rcas_3447 NC_009767.1 4503478 4504242 D PFAM: RDD domain containing protein; KEGG: rrs:RoseRS_1596 RDD domain containing protein; RDD domain-containing protein 4503478..4504242 Roseiflexus castenholzii DSM 13941 5540946 YP_001433516.1 CDS Rcas_3448 NC_009767.1 4504301 4505194 R PFAM: histone deacetylase superfamily; KEGG: rrs:RoseRS_1584 histone deacetylase superfamily; histone deacetylase superfamily protein complement(4504301..4505194) Roseiflexus castenholzii DSM 13941 5540947 YP_001433517.1 CDS Rcas_3449 NC_009767.1 4505191 4506825 R PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: rrs:RoseRS_1583 ATP dependent DNA ligase; ATP dependent DNA ligase complement(4505191..4506825) Roseiflexus castenholzii DSM 13941 5540948 YP_001433518.1 CDS Rcas_3450 NC_009767.1 4507059 4508276 D PFAM: SCP-like extracellular; KEGG: rrs:RoseRS_2195 allergen V5/TPX-1 family protein; SCP-like extracellular 4507059..4508276 Roseiflexus castenholzii DSM 13941 5540949 YP_001433519.1 CDS Rcas_3451 NC_009767.1 4508337 4508891 D KEGG: rrs:RoseRS_2194 hypothetical protein; hypothetical protein 4508337..4508891 Roseiflexus castenholzii DSM 13941 5540950 YP_001433520.1 CDS Rcas_3452 NC_009767.1 4508891 4509154 D hypothetical protein 4508891..4509154 Roseiflexus castenholzii DSM 13941 5540951 YP_001433521.1 CDS Rcas_3453 NC_009767.1 4510571 4512013 R PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_2732 carbohydrate kinase, FGGY; carbohydrate kinase FGGY complement(4510571..4512013) Roseiflexus castenholzii DSM 13941 5540952 YP_001433522.1 CDS Rcas_3454 NC_009767.1 4512026 4514218 R TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_2731 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; short chain dehydrogenase complement(4512026..4514218) Roseiflexus castenholzii DSM 13941 5540953 YP_001433523.1 CDS Rcas_3455 NC_009767.1 4514608 4515894 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(4514608..4515894) Roseiflexus castenholzii DSM 13941 5540954 YP_001433524.1 CDS Rcas_3456 NC_009767.1 4515922 4516245 R PFAM: protein of unknown function DUF718; KEGG: rrs:RoseRS_2729 protein of unknown function DUF718; hypothetical protein complement(4515922..4516245) Roseiflexus castenholzii DSM 13941 5540955 YP_001433525.1 CDS Rcas_3457 NC_009767.1 4516408 4517205 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_2724 transcriptional regulator, DeoR family; DeoR family transcriptional regulator complement(4516408..4517205) Roseiflexus castenholzii DSM 13941 5540956 YP_001433526.1 CDS Rcas_3458 NC_009767.1 4517344 4517967 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2260 protein of unknown function DUF820; hypothetical protein 4517344..4517967 Roseiflexus castenholzii DSM 13941 5540957 YP_001433527.1 CDS Rcas_3459 NC_009767.1 4517971 4519029 R catalyzes N(2)-acetyl-L-lysine + H(2)O = acetate + L-lysine; acetyl-lysine deacetylase complement(4517971..4519029) Roseiflexus castenholzii DSM 13941 5540958 YP_001433528.1 CDS Rcas_3460 NC_009767.1 4519026 4520192 R TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rrs:RoseRS_2722 acetylornithine and succinylornithine aminotransferase; acetylornithine and succinylornithine aminotransferase complement(4519026..4520192) Roseiflexus castenholzii DSM 13941 5540959 YP_001433529.1 CDS Rcas_3461 NC_009767.1 4521185 4521697 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_2721 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4521185..4521697 Roseiflexus castenholzii DSM 13941 5540960 YP_001433530.1 CDS Rcas_3462 NC_009767.1 4521823 4523061 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_1063 major facilitator superfamily MFS_1; major facilitator transporter complement(4521823..4523061) Roseiflexus castenholzii DSM 13941 5540961 YP_001433531.1 CDS Rcas_3463 NC_009767.1 4523136 4523507 D hypothetical protein 4523136..4523507 Roseiflexus castenholzii DSM 13941 5540962 YP_001433532.1 CDS Rcas_3464 NC_009767.1 4523876 4524355 R KEGG: mlo:mlr9643 transposase; hypothetical protein complement(4523876..4524355) Roseiflexus castenholzii DSM 13941 5540963 YP_001433533.1 CDS Rcas_3465 NC_009767.1 4524444 4525802 R KEGG: pna:Pnap_4710 hypothetical protein; hypothetical protein complement(4524444..4525802) Roseiflexus castenholzii DSM 13941 5540964 YP_001433534.1 CDS Rcas_3466 NC_009767.1 4526068 4526871 R catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate and N-acetyl-L-aminoadipate to form N-acetyl-L-aminoadipate 5-phosphate in arginine and lysine biosynthesis; acetylglutamate/acetylaminoadipate kinase complement(4526068..4526871) Roseiflexus castenholzii DSM 13941 5540965 YP_001433535.1 CDS Rcas_3467 NC_009767.1 4526868 4528991 R PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_1061 pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(4526868..4528991) Roseiflexus castenholzii DSM 13941 5540966 YP_001433536.1 CDS Rcas_3468 NC_009767.1 4529223 4530269 R KEGG: rrs:RoseRS_1060 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase complement(4529223..4530269) Roseiflexus castenholzii DSM 13941 5540967 YP_001433537.1 CDS Rcas_3469 NC_009767.1 4530266 4531123 R TIGRFAM: alpha-L-glutamate ligase, RimK family; lysine biosynthesis enzyme LysX; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; RimK domain protein ATP-grasp; KEGG: rrs:RoseRS_1059 lysine biosynthesis enzyme LysX; lysine biosynthesis protein LysX complement(4530266..4531123) Roseiflexus castenholzii DSM 13941 5540968 YP_001433538.1 CDS Rcas_3470 NC_009767.1 4531127 4531294 R TIGRFAM: lysine biosynthesis protein LysW; PFAM: PhnA protein; KEGG: rrs:RoseRS_1058 lysine biosynthesis protein LysW; lysine biosynthesis protein LysW complement(4531127..4531294) Roseiflexus castenholzii DSM 13941 5540969 YP_001433539.1 CDS Rcas_3471 NC_009767.1 4531309 4532391 R PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rrs:RoseRS_1057 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(4531309..4532391) Roseiflexus castenholzii DSM 13941 5540970 YP_001433540.1 CDS Rcas_3472 NC_009767.1 4532388 4532888 R catalyzes the formation of homoisocitrate from cis-homoaconitate; homoaconitate hydratase small subunit complement(4532388..4532888) Roseiflexus castenholzii DSM 13941 5540971 YP_001433541.1 CDS Rcas_3473 NC_009767.1 4533113 4534231 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_1055 cystathionine gamma-synthase; cystathionine gamma-synthase complement(4533113..4534231) Roseiflexus castenholzii DSM 13941 5540972 YP_001433542.1 CDS Rcas_3474 NC_009767.1 4534622 4535881 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit complement(4534622..4535881) Roseiflexus castenholzii DSM 13941 5540973 YP_001433543.1 CDS Rcas_3475 NC_009767.1 4538012 4538569 D KEGG: rrs:RoseRS_1052 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 4538012..4538569 Roseiflexus castenholzii DSM 13941 5540974 YP_001433544.1 CDS Rcas_3476 NC_009767.1 4538994 4539974 D KEGG: rrs:RoseRS_1050 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 4538994..4539974 Roseiflexus castenholzii DSM 13941 5540975 YP_001433545.1 CDS Rcas_3477 NC_009767.1 4539991 4540197 D KEGG: rrs:RoseRS_1049 hypothetical protein; hypothetical protein 4539991..4540197 Roseiflexus castenholzii DSM 13941 5540976 YP_001433546.1 CDS Rcas_3478 NC_009767.1 4540190 4540642 D KEGG: rrs:RoseRS_1048 hypothetical protein; hypothetical protein 4540190..4540642 Roseiflexus castenholzii DSM 13941 5540977 YP_001433547.1 CDS Rcas_3479 NC_009767.1 4540639 4541973 D KEGG: rrs:RoseRS_1047 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I 4540639..4541973 Roseiflexus castenholzii DSM 13941 5540978 YP_001433548.1 CDS Rcas_3480 NC_009767.1 4542200 4543627 D KEGG: rrs:RoseRS_1046 hypothetical protein; hypothetical protein 4542200..4543627 Roseiflexus castenholzii DSM 13941 5540979 YP_001433549.1 CDS Rcas_3481 NC_009767.1 4543632 4544042 D TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: rrs:RoseRS_1045 holo-acyl-carrier-protein synthase; holo-acyl-carrier-protein synthase 4543632..4544042 Roseiflexus castenholzii DSM 13941 5540980 YP_001433550.1 CDS Rcas_3482 NC_009767.1 4544036 4544425 D KEGG: rrs:RoseRS_1044 hypothetical protein; hypothetical protein 4544036..4544425 Roseiflexus castenholzii DSM 13941 5540981 YP_001433551.1 CDS Rcas_3483 NC_009767.1 4545065 4546726 D PFAM: Protein of unknown function DUF1800; KEGG: rrs:RoseRS_2159 hypothetical protein; hypothetical protein 4545065..4546726 Roseiflexus castenholzii DSM 13941 5540982 YP_001433552.1 CDS Rcas_3484 NC_009767.1 4546735 4548054 D PFAM: protein of unknown function DUF1501; KEGG: rrs:RoseRS_2158 protein of unknown function DUF1501; hypothetical protein 4546735..4548054 Roseiflexus castenholzii DSM 13941 5540983 YP_001433553.1 CDS Rcas_3485 NC_009767.1 4548061 4548480 R PFAM: protein of unknown function UPF0047; KEGG: rrs:RoseRS_2157 protein of unknown function UPF0047; hypothetical protein complement(4548061..4548480) Roseiflexus castenholzii DSM 13941 5540984 YP_001433554.1 CDS Rcas_3486 NC_009767.1 4548532 4549554 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0728 protein of unknown function DUF820; hypothetical protein complement(4548532..4549554) Roseiflexus castenholzii DSM 13941 5540985 YP_001433555.1 CDS Rcas_3487 NC_009767.1 4549593 4550156 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_2156 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase complement(4549593..4550156) Roseiflexus castenholzii DSM 13941 5540986 YP_001433556.1 CDS Rcas_3488 NC_009767.1 4550422 4552080 D TIGRFAM: Zeta-phytoene desaturase; PFAM: amine oxidase; KEGG: rrs:RoseRS_2155 phytoene dehydrogenase-related protein; zeta-phytoene desaturase 4550422..4552080 Roseiflexus castenholzii DSM 13941 5540987 YP_001433557.1 CDS Rcas_3489 NC_009767.1 4552145 4555264 D PFAM: WD-40 repeat protein; SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_2154 WD-40 repeat protein; hypothetical protein 4552145..4555264 Roseiflexus castenholzii DSM 13941 5540988 YP_001433558.1 CDS Rcas_3490 NC_009767.1 4555278 4556471 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: rrs:RoseRS_2153 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein complement(4555278..4556471) Roseiflexus castenholzii DSM 13941 5540989 YP_001433559.1 CDS Rcas_3491 NC_009767.1 4556596 4557240 R PFAM: isochorismatase hydrolase; KEGG: rrs:RoseRS_0048 isochorismatase hydrolase; N-carbamoylsarcosine amidase complement(4556596..4557240) Roseiflexus castenholzii DSM 13941 5540990 YP_001433560.1 CDS Rcas_3492 NC_009767.1 4557521 4559458 R PFAM: Hydantoinase B/oxoprolinase; KEGG: nar:Saro_0175 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase complement(4557521..4559458) Roseiflexus castenholzii DSM 13941 5540991 YP_001433561.1 CDS Rcas_3493 NC_009767.1 4559503 4561548 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: nar:Saro_0176 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase complement(4559503..4561548) Roseiflexus castenholzii DSM 13941 5540992 YP_001433562.1 CDS Rcas_3494 NC_009767.1 4561594 4562547 R PFAM: pyruvate carboxyltransferase; KEGG: rrs:RoseRS_0049 pyruvate carboxyltransferase; pyruvate carboxyltransferase complement(4561594..4562547) Roseiflexus castenholzii DSM 13941 5540993 YP_001433563.1 CDS Rcas_3495 NC_009767.1 4562547 4563755 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rrs:RoseRS_0050 formyl-CoA transferase; formyl-CoA transferase complement(4562547..4563755) Roseiflexus castenholzii DSM 13941 5540994 YP_001433564.1 CDS Rcas_3496 NC_009767.1 4563761 4564474 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rrs:RoseRS_0051 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(4563761..4564474) Roseiflexus castenholzii DSM 13941 5540995 YP_001433565.1 CDS Rcas_3497 NC_009767.1 4564809 4565255 R hypothetical protein complement(4564809..4565255) Roseiflexus castenholzii DSM 13941 5540996 YP_001433566.1 CDS Rcas_3498 NC_009767.1 4565258 4565968 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_4073 ABC transporter related; ABC transporter-like protein complement(4565258..4565968) Roseiflexus castenholzii DSM 13941 5540997 YP_001433567.1 CDS Rcas_3499 NC_009767.1 4565995 4567845 R PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_4103 ABC transporter related; ABC transporter-like protein complement(4565995..4567845) Roseiflexus castenholzii DSM 13941 5540998 YP_001433568.1 CDS Rcas_3500 NC_009767.1 4567859 4568734 R PFAM: inner-membrane translocator; KEGG: nca:Noca_4104 inner-membrane translocator; inner-membrane translocator complement(4567859..4568734) Roseiflexus castenholzii DSM 13941 5540999 YP_001433569.1 CDS Rcas_3501 NC_009767.1 4568846 4570192 R PFAM: Extracellular ligand-binding receptor; KEGG: nca:Noca_4105 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(4568846..4570192) Roseiflexus castenholzii DSM 13941 5541000 YP_001433570.1 CDS Rcas_3502 NC_009767.1 4570236 4571000 R KEGG: nca:Noca_4076 hypothetical protein; hypothetical protein complement(4570236..4571000) Roseiflexus castenholzii DSM 13941 5541001 YP_001433571.1 CDS Rcas_3503 NC_009767.1 4571050 4571490 R KEGG: ana:all5013 unknown protein; hypothetical protein complement(4571050..4571490) Roseiflexus castenholzii DSM 13941 5541002 YP_001433572.1 CDS Rcas_3504 NC_009767.1 4571490 4572914 R PFAM: aldehyde dehydrogenase; KEGG: ana:all5022 aldehyde dehydrogenase; aldehyde dehydrogenase complement(4571490..4572914) Roseiflexus castenholzii DSM 13941 5541003 YP_001433573.1 CDS Rcas_3505 NC_009767.1 4572914 4574011 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ana:all5023 probable hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4572914..4574011) Roseiflexus castenholzii DSM 13941 5541004 YP_001433574.1 CDS Rcas_3506 NC_009767.1 4574116 4574496 R KEGG: nca:Noca_4101 hypothetical protein; hypothetical protein complement(4574116..4574496) Roseiflexus castenholzii DSM 13941 5541005 YP_001433575.1 CDS Rcas_3507 NC_009767.1 4574576 4575256 R KEGG: ava:Ava_2261 hypothetical protein; hypothetical protein complement(4574576..4575256) Roseiflexus castenholzii DSM 13941 5541006 YP_001433576.1 CDS Rcas_3508 NC_009767.1 4575357 4576097 D PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: gtn:GTNG_2203 transcriptional regulator GntR family; GntR family transcriptional regulator 4575357..4576097 Roseiflexus castenholzii DSM 13941 5541007 YP_001433577.1 CDS Rcas_3509 NC_009767.1 4576112 4576966 R hypothetical protein complement(4576112..4576966) Roseiflexus castenholzii DSM 13941 5541008 YP_001433578.1 CDS Rcas_3510 NC_009767.1 4576983 4577882 R hypothetical protein complement(4576983..4577882) Roseiflexus castenholzii DSM 13941 5541009 YP_001433579.1 CDS Rcas_3511 NC_009767.1 4577896 4578711 R KEGG: sth:STH1729 hypothetical protein; hypothetical protein complement(4577896..4578711) Roseiflexus castenholzii DSM 13941 5541010 YP_001433580.1 CDS Rcas_3512 NC_009767.1 4578717 4579169 R hypothetical protein complement(4578717..4579169) Roseiflexus castenholzii DSM 13941 5541011 YP_001433581.1 CDS Rcas_3513 NC_009767.1 4579225 4579701 R PFAM: protein of unknown function DUF296; KEGG: gme:Gmet_0490 protein of unknown function DUF296; hypothetical protein complement(4579225..4579701) Roseiflexus castenholzii DSM 13941 5541012 YP_001433582.1 CDS Rcas_3514 NC_009767.1 4579807 4580280 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sus:Acid_7719 redoxin domain protein; alkyl hydroperoxide reductase 4579807..4580280 Roseiflexus castenholzii DSM 13941 5541013 YP_001433583.1 CDS Rcas_3515 NC_009767.1 4580299 4581192 D PFAM: pyruvate carboxyltransferase; KEGG: sru:SRU_1246 3-hydroxy-3-methylglutaryl-CoA lyase; pyruvate carboxyltransferase 4580299..4581192 Roseiflexus castenholzii DSM 13941 5541014 YP_001433584.1 CDS Rcas_3516 NC_009767.1 4581228 4582460 D KEGG: pth:PTH_2519 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase 4581228..4582460 Roseiflexus castenholzii DSM 13941 5541015 YP_001433585.1 CDS Rcas_3517 NC_009767.1 4582470 4582982 D TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: mtp:Mthe_0853 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 4582470..4582982 Roseiflexus castenholzii DSM 13941 5541016 YP_001433586.1 CDS Rcas_3518 NC_009767.1 4583032 4584234 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: acr:Acry_2696 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 4583032..4584234 Roseiflexus castenholzii DSM 13941 5541017 YP_001433587.1 CDS Rcas_3519 NC_009767.1 4584266 4585732 D PFAM: amidohydrolase; KEGG: ana:alr5010 D-hydantoinase; dihydropyrimidinase 4584266..4585732 Roseiflexus castenholzii DSM 13941 5541018 YP_001433588.1 CDS Rcas_3520 NC_009767.1 4586180 4587322 D KEGG: rrs:RoseRS_2152 hypothetical protein; hypothetical protein 4586180..4587322 Roseiflexus castenholzii DSM 13941 5541019 YP_001433589.1 CDS Rcas_3521 NC_009767.1 4587198 4588343 R hypothetical protein complement(4587198..4588343) Roseiflexus castenholzii DSM 13941 5541020 YP_001433590.1 CDS Rcas_3522 NC_009767.1 4588472 4589629 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_2150 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4588472..4589629) Roseiflexus castenholzii DSM 13941 5541021 YP_001433591.1 CDS Rcas_3523 NC_009767.1 4589651 4590382 R KEGG: rrs:RoseRS_2149 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; signal peptidase I complement(4589651..4590382) Roseiflexus castenholzii DSM 13941 5541022 YP_001433592.1 CDS Rcas_3524 NC_009767.1 4590532 4591524 D KEGG: rrs:RoseRS_2148 pyruvate-formate lyase-activating enzyme-like protein; pyruvate-formate lyase-activating enzyme-like protein 4590532..4591524 Roseiflexus castenholzii DSM 13941 5541023 YP_001433593.1 CDS Rcas_3525 NC_009767.1 4591595 4592014 D PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_2147 FHA domain containing protein; FHA domain-containing protein 4591595..4592014 Roseiflexus castenholzii DSM 13941 5541024 YP_001433594.1 CDS engA NC_009767.1 4592015 4593499 R EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA complement(4592015..4593499) Roseiflexus castenholzii DSM 13941 5541025 YP_001433595.1 CDS Rcas_3527 NC_009767.1 4593505 4595193 R PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_2145 metal dependent phosphohydrolase; metal dependent phosphohydrolase complement(4593505..4595193) Roseiflexus castenholzii DSM 13941 5541026 YP_001433596.1 CDS Rcas_3528 NC_009767.1 4595227 4596774 R PFAM: protein of unknown function DUF512; SMART: PDZ/DHR/GLGF domain protein; KEGG: rrs:RoseRS_2144 protein of unknown function DUF512; hypothetical protein complement(4595227..4596774) Roseiflexus castenholzii DSM 13941 5541027 YP_001433597.1 CDS Rcas_3529 NC_009767.1 4597148 4598854 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(4597148..4598854) Roseiflexus castenholzii DSM 13941 5541028 YP_001433598.1 CDS Rcas_3530 NC_009767.1 4598986 4600998 R The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B complement(4598986..4600998) Roseiflexus castenholzii DSM 13941 5541029 YP_001433599.1 CDS Rcas_3531 NC_009767.1 4601515 4604781 D TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: rrs:RoseRS_3706 DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 4601515..4604781 Roseiflexus castenholzii DSM 13941 5541030 YP_001433600.1 CDS Rcas_3532 NC_009767.1 4604784 4605365 R PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rrs:RoseRS_3707 isoprenylcysteine carboxyl methyltransferase; isoprenylcysteine carboxyl methyltransferase complement(4604784..4605365) Roseiflexus castenholzii DSM 13941 5541031 YP_001433601.1 CDS Rcas_3533 NC_009767.1 4605458 4606471 D PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rrs:RoseRS_3708 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein 4605458..4606471 Roseiflexus castenholzii DSM 13941 5541032 YP_001433602.1 CDS Rcas_3535 NC_009767.1 4607786 4609576 R KEGG: rrs:RoseRS_3712 hypothetical protein; hypothetical protein complement(4607786..4609576) Roseiflexus castenholzii DSM 13941 5541034 YP_001433603.1 CDS Rcas_3536 NC_009767.1 4609596 4611401 R KEGG: rrs:RoseRS_3713 hypothetical protein; hypothetical protein complement(4609596..4611401) Roseiflexus castenholzii DSM 13941 5541035 YP_001433604.1 CDS Rcas_3537 NC_009767.1 4611598 4612761 R KEGG: rrs:RoseRS_3714 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(4611598..4612761) Roseiflexus castenholzii DSM 13941 5541036 YP_001433605.1 CDS Rcas_3538 NC_009767.1 4612842 4614062 R PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_3715 protein of unknown function UPF0118; hypothetical protein complement(4612842..4614062) Roseiflexus castenholzii DSM 13941 5541037 YP_001433606.1 CDS Rcas_3539 NC_009767.1 4615176 4615781 R TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rrs:RoseRS_3716 2'-5' RNA ligase; 2'-5' RNA ligase complement(4615176..4615781) Roseiflexus castenholzii DSM 13941 5541038 YP_001433607.1 CDS Rcas_3540 NC_009767.1 4615890 4618016 R PFAM: Polyphosphate kinase; KEGG: rrs:RoseRS_3717 polyphosphate kinase; polyphosphate kinase complement(4615890..4618016) Roseiflexus castenholzii DSM 13941 5541039 YP_001433608.1 CDS Rcas_3541 NC_009767.1 4618527 4619873 D KEGG: rrs:RoseRS_1743 Cna B domain protein; hypothetical protein 4618527..4619873 Roseiflexus castenholzii DSM 13941 5541040 YP_001433609.1 CDS Rcas_3542 NC_009767.1 4620779 4621396 R PFAM: protein of unknown function DUF1405; KEGG: rrs:RoseRS_3718 protein of unknown function DUF1405; hypothetical protein complement(4620779..4621396) Roseiflexus castenholzii DSM 13941 5541043 YP_001433610.1 CDS Rcas_3543 NC_009767.1 4621670 4622293 R PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_3719 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase complement(4621670..4622293) Roseiflexus castenholzii DSM 13941 5541044 YP_001433611.1 CDS Rcas_3544 NC_009767.1 4622300 4622791 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rrs:RoseRS_3720 peptidylprolyl isomerase; peptidyl-prolyl isomerase complement(4622300..4622791) Roseiflexus castenholzii DSM 13941 5541045 YP_001433612.1 CDS Rcas_3545 NC_009767.1 4623344 4624612 D PFAM: peptidase M16 domain protein; KEGG: rrs:RoseRS_2274 peptidase M16 domain protein; peptidase M16 domain-containing protein 4623344..4624612 Roseiflexus castenholzii DSM 13941 5541046 YP_001433613.1 CDS Rcas_3546 NC_009767.1 4624698 4626008 D PFAM: peptidase M16 domain protein; KEGG: rrs:RoseRS_2273 peptidase M16 domain protein; peptidase M16 domain-containing protein 4624698..4626008 Roseiflexus castenholzii DSM 13941 5541047 YP_001433614.1 CDS Rcas_3547 NC_009767.1 4625989 4627365 D PFAM: protein of unknown function DUF262; KEGG: pth:PTH_0153 hypothetical protein; hypothetical protein 4625989..4627365 Roseiflexus castenholzii DSM 13941 5541048 YP_001433615.1 CDS Rcas_3548 NC_009767.1 4627362 4628468 D KEGG: pth:PTH_0154 hypothetical protein; hypothetical protein 4627362..4628468 Roseiflexus castenholzii DSM 13941 5541049 YP_001433616.1 CDS Rcas_3549 NC_009767.1 4629503 4631347 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2272 ABC transporter related; ABC transporter-like protein 4629503..4631347 Roseiflexus castenholzii DSM 13941 5541050 YP_001433617.1 CDS Rcas_3550 NC_009767.1 4631344 4632075 D KEGG: rrs:RoseRS_2271 protein tyrosine/serine phosphatase; protein tyrosine/serine phosphatase 4631344..4632075 Roseiflexus castenholzii DSM 13941 5541051 YP_001433618.1 CDS Rcas_3551 NC_009767.1 4632603 4634501 D PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2270 ABC transporter related; ABC transporter-like protein 4632603..4634501 Roseiflexus castenholzii DSM 13941 5541052 YP_001433619.1 CDS Rcas_3552 NC_009767.1 4634754 4635332 R KEGG: rrs:RoseRS_2269 hypothetical protein; hypothetical protein complement(4634754..4635332) Roseiflexus castenholzii DSM 13941 5541053 YP_001433620.1 CDS Rcas_3553 NC_009767.1 4635551 4635886 D PFAM: Cupin 2 conserved barrel domain protein; KEGG: rrs:RoseRS_2268 cupin 2, conserved barrel domain protein; cupin 4635551..4635886 Roseiflexus castenholzii DSM 13941 5541054 YP_001433621.1 CDS Rcas_3554 NC_009767.1 4639589 4640383 R KEGG: rrs:RoseRS_2267 membrane protein-like protein; hypothetical protein complement(4639589..4640383) Roseiflexus castenholzii DSM 13941 5541055 YP_001433622.1 CDS Rcas_3555 NC_009767.1 4640399 4640740 R KEGG: rrs:RoseRS_2266 caa(3)-type oxidase, subunit IV; caa(3)-type oxidase subunit IV complement(4640399..4640740) Roseiflexus castenholzii DSM 13941 5541056 YP_001433623.1 CDS Rcas_3556 NC_009767.1 4640756 4641367 R PFAM: cytochrome c oxidase subunit III; KEGG: rrs:RoseRS_2265 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III complement(4640756..4641367) Roseiflexus castenholzii DSM 13941 5541057 YP_001433624.1 CDS Rcas_3557 NC_009767.1 4641640 4643565 R KEGG: rrs:RoseRS_2264 cytochrome-c oxidase; TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I type complement(4641640..4643565) Roseiflexus castenholzii DSM 13941 5541058 YP_001433625.1 CDS Rcas_3558 NC_009767.1 4643587 4644699 R TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: rrs:RoseRS_2263 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II complement(4643587..4644699) Roseiflexus castenholzii DSM 13941 5541059 YP_001433626.1 CDS hppA NC_009767.1 4646434 4648773 D pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 4646434..4648773 Roseiflexus castenholzii DSM 13941 5541060 YP_001433627.1 CDS Rcas_3560 NC_009767.1 4648891 4649277 R KEGG: rrs:RoseRS_2261 hypothetical protein; hypothetical protein complement(4648891..4649277) Roseiflexus castenholzii DSM 13941 5541061 YP_001433628.1 CDS Rcas_3561 NC_009767.1 4649472 4650554 R PFAM: transposase IS4 family protein; KEGG: fra:Francci3_4220 transposase, IS4; transposase IS4 family protein complement(4649472..4650554) Roseiflexus castenholzii DSM 13941 5541062 YP_001433629.1 CDS Rcas_3562 NC_009767.1 4650644 4651603 D PFAM: regulatory protein GntR HTH; KEGG: rrs:RoseRS_1355 regulatory protein GntR, HTH; GntR family transcriptional regulator 4650644..4651603 Roseiflexus castenholzii DSM 13941 5541063 YP_001433630.1 CDS Rcas_3563 NC_009767.1 4651600 4653654 D PFAM: glycoside hydrolase clan GH-D; KEGG: rrs:RoseRS_1356 glycoside hydrolase, clan GH-D; glycoside hydrolase clan GH-D 4651600..4653654 Roseiflexus castenholzii DSM 13941 5541064 YP_001433631.1 CDS Rcas_3564 NC_009767.1 4653848 4654798 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1357 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4653848..4654798 Roseiflexus castenholzii DSM 13941 5541065 YP_001433632.1 CDS Rcas_3565 NC_009767.1 4654798 4655673 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_1358 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport systems inner membrane component 4654798..4655673 Roseiflexus castenholzii DSM 13941 5541066 YP_001433633.1 CDS Rcas_3566 NC_009767.1 4655754 4657118 D PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_1359 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4655754..4657118 Roseiflexus castenholzii DSM 13941 5541067 YP_001433634.1 CDS Rcas_3567 NC_009767.1 4657124 4659151 D PFAM: glycoside hydrolase clan GH-D; KEGG: rrs:RoseRS_1360 glycoside hydrolase, clan GH-D; glycoside hydrolase clan GH-D 4657124..4659151 Roseiflexus castenholzii DSM 13941 5541068 YP_001433635.1 CDS Rcas_3568 NC_009767.1 4659333 4660325 D KEGG: rrs:RoseRS_1361 hypothetical protein; hypothetical protein 4659333..4660325 Roseiflexus castenholzii DSM 13941 5541069 YP_001433636.1 CDS Rcas_3569 NC_009767.1 4660322 4661095 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1362 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4660322..4661095 Roseiflexus castenholzii DSM 13941 5541070 YP_001433637.1 CDS Rcas_3570 NC_009767.1 4661564 4663975 D KEGG: rrs:RoseRS_1363 spermine synthase; spermine synthase 4661564..4663975 Roseiflexus castenholzii DSM 13941 5541071 YP_001433638.1 CDS Rcas_3571 NC_009767.1 4664115 4665113 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1364 oxidoreductase domain protein; oxidoreductase domain-containing protein 4664115..4665113 Roseiflexus castenholzii DSM 13941 5541072 YP_001433639.1 CDS Rcas_3572 NC_009767.1 4665152 4666231 D PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1365 oxidoreductase domain protein; oxidoreductase domain-containing protein 4665152..4666231 Roseiflexus castenholzii DSM 13941 5541073 YP_001433640.1 CDS Rcas_3573 NC_009767.1 4666337 4666957 D KEGG: rrs:RoseRS_1366 hypothetical protein; hypothetical protein 4666337..4666957 Roseiflexus castenholzii DSM 13941 5541074 YP_001433641.1 CDS Rcas_3574 NC_009767.1 4666960 4667226 D TIGRFAM: conserved hypothetical selenoprotein; KEGG: rrs:RoseRS_1367 conserved hypothetical selenoprotein; selenoprotein 4666960..4667226 Roseiflexus castenholzii DSM 13941 5541075 YP_001433642.1 CDS Rcas_3575 NC_009767.1 4667195 4667746 R PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rrs:RoseRS_1368 pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(4667195..4667746) Roseiflexus castenholzii DSM 13941 5541076 YP_001433643.1 CDS Rcas_3576 NC_009767.1 4668687 4669436 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rrs:RoseRS_1369 thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate binding domain-containing protein complement(4668687..4669436) Roseiflexus castenholzii DSM 13941 5541077 YP_001433644.1 CDS Rcas_3577 NC_009767.1 4669433 4670536 R PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: rrs:RoseRS_1370 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein complement(4669433..4670536) Roseiflexus castenholzii DSM 13941 5541078 YP_001433645.1 CDS Rcas_3578 NC_009767.1 4670576 4670848 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_1371 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin complement(4670576..4670848) Roseiflexus castenholzii DSM 13941 5541079 YP_001433646.1 CDS Rcas_3579 NC_009767.1 4670861 4672090 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1372 radical SAM domain protein; radical SAM domain-containing protein complement(4670861..4672090) Roseiflexus castenholzii DSM 13941 5541080 YP_001433647.1 CDS Rcas_3580 NC_009767.1 4672107 4673420 R KEGG: rrs:RoseRS_1373 hypothetical protein; hypothetical protein complement(4672107..4673420) Roseiflexus castenholzii DSM 13941 5541081 YP_001433648.1 CDS Rcas_3581 NC_009767.1 4673602 4674639 D PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_1374 GHMP kinase; GHMP kinase 4673602..4674639 Roseiflexus castenholzii DSM 13941 5541082 YP_001433649.1 CDS Rcas_3582 NC_009767.1 4675347 4676264 D PFAM: Indigoidine synthase A family protein; KEGG: rrs:RoseRS_1375 indigoidine synthase A family protein; indigoidine synthase A family protein 4675347..4676264 Roseiflexus castenholzii DSM 13941 5541083 YP_001433650.1 CDS Rcas_3583 NC_009767.1 4676261 4677460 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 4676261..4677460 Roseiflexus castenholzii DSM 13941 5541084 YP_001433651.1 CDS Rcas_3584 NC_009767.1 4677637 4678803 D PFAM: aminotransferase class V; KEGG: rrs:RoseRS_1377 aminotransferase, class V; class V aminotransferase 4677637..4678803 Roseiflexus castenholzii DSM 13941 5541085 YP_001433652.1 CDS Rcas_3585 NC_009767.1 4678816 4680633 R TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: rrs:RoseRS_1255 oligoendopeptidase F; oligoendopeptidase F complement(4678816..4680633) Roseiflexus castenholzii DSM 13941 5541086 YP_001433653.1 CDS Rcas_3586 NC_009767.1 4680656 4682821 R PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: rrs:RoseRS_0947 CHAD domain containing protein; CHAD domain-containing protein complement(4680656..4682821) Roseiflexus castenholzii DSM 13941 5541087 YP_001433654.1 CDS rpsO NC_009767.1 4682997 4683266 D primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 4682997..4683266 Roseiflexus castenholzii DSM 13941 5541088 YP_001433655.1 CDS Rcas_3588 NC_009767.1 4683571 4685811 D KEGG: rrs:RoseRS_0949 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 2 domain protein; KH type 1 domain protein; SMART: KH domain protein; polynucleotide phosphorylase 4683571..4685811 Roseiflexus castenholzii DSM 13941 5541089 YP_001433656.1 CDS Rcas_3589 NC_009767.1 4685914 4687128 D PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: rrs:RoseRS_0950 citrate transporter; citrate transporter 4685914..4687128 Roseiflexus castenholzii DSM 13941 5541090 YP_001433657.1 CDS Rcas_3590 NC_009767.1 4687131 4687826 R PFAM: Abortive infection protein; KEGG: rrs:RoseRS_0951 abortive infection protein; abortive infection protein complement(4687131..4687826) Roseiflexus castenholzii DSM 13941 5541091 YP_001433658.1 CDS Rcas_3591 NC_009767.1 4687823 4688158 R hypothetical protein complement(4687823..4688158) Roseiflexus castenholzii DSM 13941 5541092 YP_001433659.1 CDS Rcas_3592 NC_009767.1 4688182 4689246 R PFAM: GHMP kinase; KEGG: rrs:RoseRS_0952 GHMP kinase; GHMP kinase complement(4688182..4689246) Roseiflexus castenholzii DSM 13941 5541093 YP_001433660.1 CDS Rcas_3593 NC_009767.1 4689215 4690333 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rrs:RoseRS_0953 DNA methylase N-4/N-6 domain protein; DNA methylase N-4/N-6 domain-containing protein complement(4689215..4690333) Roseiflexus castenholzii DSM 13941 5541094 YP_001433661.1 CDS Rcas_3594 NC_009767.1 4691015 4692739 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rrs:RoseRS_0954 thiamine pyrophosphate enzyme TPP binding domain protein; thiamine pyrophosphate binding domain-containing protein complement(4691015..4692739) Roseiflexus castenholzii DSM 13941 5541095 YP_001433662.1 CDS Rcas_3595 NC_009767.1 4692875 4693195 D KEGG: rrs:RoseRS_0955 hypothetical protein; hypothetical protein 4692875..4693195 Roseiflexus castenholzii DSM 13941 5541096 YP_001433663.1 CDS Rcas_3596 NC_009767.1 4694701 4695537 D PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: rrs:RoseRS_0956 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 4694701..4695537 Roseiflexus castenholzii DSM 13941 5541097 YP_001433664.1 CDS Rcas_3597 NC_009767.1 4695542 4696570 D PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: rrs:RoseRS_0957 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 4695542..4696570 Roseiflexus castenholzii DSM 13941 5541098 YP_001433665.1 CDS Rcas_3598 NC_009767.1 4696548 4697864 D PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0958 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 4696548..4697864 Roseiflexus castenholzii DSM 13941 5541099 YP_001433666.1 CDS Rcas_3599 NC_009767.1 4697868 4698203 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rrs:RoseRS_0959 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4697868..4698203 Roseiflexus castenholzii DSM 13941 5541100 YP_001433667.1 CDS Rcas_3600 NC_009767.1 4698272 4699918 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0960 histidine kinase; histidine kinase complement(4698272..4699918) Roseiflexus castenholzii DSM 13941 5541101 YP_001433668.1 CDS Rcas_3601 NC_009767.1 4699923 4701266 R KEGG: mlo:mll3244 hypothetical protein; hypothetical protein complement(4699923..4701266) Roseiflexus castenholzii DSM 13941 5541102 YP_001433669.1 CDS Rcas_3602 NC_009767.1 4701273 4702007 R KEGG: mlo:mll3246 hypothetical protein; hypothetical protein complement(4701273..4702007) Roseiflexus castenholzii DSM 13941 5541103 YP_001433670.1 CDS Rcas_3603 NC_009767.1 4702004 4702528 R KEGG: cme:CMF181C small GTP-binding protein of Rab family; TIGRFAM: small GTP-binding protein; PFAM: Miro domain protein; Ras family protein; SMART: Ras small GTPase, Ras type; Ras small GTPase, Rho type; Ras small GTPase, Rab type; small GTP-binding protein complement(4702004..4702528) Roseiflexus castenholzii DSM 13941 5541104 YP_001433671.1 CDS Rcas_3604 NC_009767.1 4702858 4704717 D KEGG: rrs:RoseRS_3371 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; metal dependent phophohydrolase; PFAM: response regulator receiver; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region; PAS/PAC sensor protein 4702858..4704717 Roseiflexus castenholzii DSM 13941 5541105 YP_001433672.1 CDS Rcas_3605 NC_009767.1 4706393 4707181 R PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0962 methyltransferase type 12; type 11 methyltransferase complement(4706393..4707181) Roseiflexus castenholzii DSM 13941 5541106 YP_001433673.1 CDS Rcas_3606 NC_009767.1 4707159 4707773 R KEGG: rrs:RoseRS_0963 hypothetical protein; hypothetical protein complement(4707159..4707773) Roseiflexus castenholzii DSM 13941 5541107 YP_001433674.1 CDS Rcas_3607 NC_009767.1 4707872 4708546 R TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: rrs:RoseRS_3933 thiamine pyrophosphokinase; thiamine pyrophosphokinase complement(4707872..4708546) Roseiflexus castenholzii DSM 13941 5541108 YP_001433675.1 CDS Rcas_3608 NC_009767.1 4708554 4709420 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rrs:RoseRS_3934 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(4708554..4709420) Roseiflexus castenholzii DSM 13941 5541109 YP_001433676.1 CDS Rcas_3609 NC_009767.1 4712322 4715033 R PFAM: Forkhead-associated protein; ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: rrs:RoseRS_3935 FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits; FHA modulated ABC efflux pump ATPase/integral membrane protein complement(4712322..4715033) Roseiflexus castenholzii DSM 13941 5541110 YP_001433677.1 CDS Rcas_3610 NC_009767.1 4715366 4718617 R PFAM: Forkhead-associated protein; KEGG: rrs:RoseRS_3936 hypothetical protein; FHA domain-containing protein complement(4715366..4718617) Roseiflexus castenholzii DSM 13941 5541111 YP_001433678.1 CDS Rcas_3611 NC_009767.1 4718997 4721168 D PFAM: Amylo-alpha-16-glucosidase; KEGG: rrs:RoseRS_3939 amylo-alpha-1,6-glucosidase; amylo-alpha-1,6-glucosidase 4718997..4721168 Roseiflexus castenholzii DSM 13941 5541113 YP_001433679.1 CDS Rcas_3612 NC_009767.1 4722552 4723787 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_3940 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(4722552..4723787) Roseiflexus castenholzii DSM 13941 5541114 YP_001433680.1 CDS Rcas_3613 NC_009767.1 4723859 4724476 R PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rrs:RoseRS_3941 NADP oxidoreductase, coenzyme F420-dependent; coenzyme F420-dependent NADP oxidoreductase complement(4723859..4724476) Roseiflexus castenholzii DSM 13941 5541115 YP_001433681.1 CDS Rcas_3614 NC_009767.1 4724473 4725477 R PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: rrs:RoseRS_3942 ATPase, BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase complement(4724473..4725477) Roseiflexus castenholzii DSM 13941 5541116 YP_001433682.1 CDS Rcas_3615 NC_009767.1 4725483 4726772 R PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: rrs:RoseRS_3943 alpha-L-fucosidase; alpha-L-fucosidase complement(4725483..4726772) Roseiflexus castenholzii DSM 13941 5541117 YP_001433683.1 CDS Rcas_3616 NC_009767.1 4726807 4727763 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_3944 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(4726807..4727763) Roseiflexus castenholzii DSM 13941 5541118 YP_001433684.1 CDS Rcas_3617 NC_009767.1 4727795 4728529 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_3945 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4727795..4728529) Roseiflexus castenholzii DSM 13941 5541119 YP_001433685.1 CDS Rcas_3618 NC_009767.1 4728976 4729344 D PFAM: regulatory protein ArsR; KEGG: rrs:RoseRS_1709 regulatory protein, ArsR; ArsR family transcriptional regulator 4728976..4729344 Roseiflexus castenholzii DSM 13941 5541120 YP_001433686.1 CDS Rcas_3619 NC_009767.1 4729352 4729591 D TIGRFAM: redox-active disulfide protein 2; KEGG: rrs:RoseRS_1708 redox-active disulfide protein 2; redox-active disulfide protein 2 4729352..4729591 Roseiflexus castenholzii DSM 13941 5541121 YP_001433687.1 CDS Rcas_3620 NC_009767.1 4729684 4730739 D PFAM: permease; KEGG: rrs:RoseRS_1707 permease; permease 4729684..4730739 Roseiflexus castenholzii DSM 13941 5541122 YP_001433688.1 CDS Rcas_3621 NC_009767.1 4730839 4731594 D PFAM: protein of unknown function DUF81; KEGG: rrs:RoseRS_2089 protein of unknown function DUF81; hypothetical protein 4730839..4731594 Roseiflexus castenholzii DSM 13941 5541123 YP_001433689.1 CDS Rcas_3622 NC_009767.1 4731615 4732067 D hypothetical protein 4731615..4732067 Roseiflexus castenholzii DSM 13941 5541124 YP_001433690.1 CDS Rcas_3623 NC_009767.1 4732992 4733651 R TIGRFAM: glutaredoxin-like domain protein; KEGG: rrs:RoseRS_3949 glutaredoxin-like domain protein; glutaredoxin-like domain-containing protein complement(4732992..4733651) Roseiflexus castenholzii DSM 13941 5541125 YP_001433691.1 CDS Rcas_3624 NC_009767.1 4733721 4734506 R PFAM: LmbE family protein; KEGG: rrs:RoseRS_3950 LmbE family protein; LmbE family protein complement(4733721..4734506) Roseiflexus castenholzii DSM 13941 5541126 YP_001433692.1 CDS Rcas_3625 NC_009767.1 4734734 4735168 D KEGG: rrs:RoseRS_3951 hypothetical protein; hypothetical protein 4734734..4735168 Roseiflexus castenholzii DSM 13941 5541127 YP_001433693.1 CDS Rcas_3626 NC_009767.1 4735169 4736410 D PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3952 major facilitator superfamily MFS_1; major facilitator transporter 4735169..4736410 Roseiflexus castenholzii DSM 13941 5541128 YP_001433694.1 CDS Rcas_3627 NC_009767.1 4736489 4736908 R KEGG: rrs:RoseRS_1018 hypothetical protein; hypothetical protein complement(4736489..4736908) Roseiflexus castenholzii DSM 13941 5541129 YP_001433695.1 CDS Rcas_3628 NC_009767.1 4737675 4738868 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rrs:RoseRS_3954 DegT/DnrJ/EryC1/StrS aminotransferase; glutamine--scyllo-inositol transaminase 4737675..4738868 Roseiflexus castenholzii DSM 13941 5541130 YP_001433696.1 CDS Rcas_3629 NC_009767.1 4738852 4740069 D PFAM: protein of unknown function DUF52; KEGG: rrs:RoseRS_3955 protein of unknown function DUF52; hypothetical protein 4738852..4740069 Roseiflexus castenholzii DSM 13941 5541131 YP_001433697.1 CDS Rcas_3630 NC_009767.1 4740931 4741698 D PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: rrs:RoseRS_3956 SH3, type 3 domain protein; SH3 type 3 domain-containing protein 4740931..4741698 Roseiflexus castenholzii DSM 13941 5541132 YP_001433698.1 CDS Rcas_3631 NC_009767.1 4743953 4744933 D KEGG: rrs:RoseRS_3487 hypothetical protein; hypothetical protein 4743953..4744933 Roseiflexus castenholzii DSM 13941 5541133 YP_001433699.1 CDS Rcas_3632 NC_009767.1 4746358 4747824 R PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: rrs:RoseRS_3957 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4746358..4747824) Roseiflexus castenholzii DSM 13941 5541134 YP_001433700.1 CDS Rcas_3633 NC_009767.1 4748791 4749981 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_3958 uncharacterized NAD(FAD)-dependent dehydrogenase-like protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4748791..4749981) Roseiflexus castenholzii DSM 13941 5541135 YP_001433701.1 CDS Rcas_3634 NC_009767.1 4750005 4750670 R PFAM: protein of unknown function DUF1641; KEGG: rrs:RoseRS_3959 protein of unknown function DUF1641; hypothetical protein complement(4750005..4750670) Roseiflexus castenholzii DSM 13941 5541136 YP_001433702.1 CDS Rcas_3635 NC_009767.1 4751001 4751957 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_3960 transcriptional regulator, LysR family; LysR family transcriptional regulator 4751001..4751957 Roseiflexus castenholzii DSM 13941 5541137 YP_001433703.1 CDS Rcas_3636 NC_009767.1 4752273 4753241 R PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4073 glycosyl transferase, family 2; glycosyl transferase family protein complement(4752273..4753241) Roseiflexus castenholzii DSM 13941 5541138 YP_001433704.1 CDS Rcas_3637 NC_009767.1 4755711 4757981 R PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_4074 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4755711..4757981) Roseiflexus castenholzii DSM 13941 5541139 YP_001433705.1 CDS Rcas_3638 NC_009767.1 4758025 4759734 R KEGG: mxa:MXAN_4618 hypothetical protein; hypothetical protein complement(4758025..4759734) Roseiflexus castenholzii DSM 13941 5541140 YP_001433706.1 CDS Rcas_3639 NC_009767.1 4759735 4760175 R hypothetical protein complement(4759735..4760175) Roseiflexus castenholzii DSM 13941 5541141 YP_001433707.1 CDS Rcas_3640 NC_009767.1 4760153 4762249 R PFAM: glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein; group 1 glycosyl transferase complement(4760153..4762249) Roseiflexus castenholzii DSM 13941 5541142 YP_001433708.1 CDS Rcas_3641 NC_009767.1 4762246 4764522 R KEGG: tte:TTE0500 predicted glycosyltransferase; hypothetical protein complement(4762246..4764522) Roseiflexus castenholzii DSM 13941 5541143 YP_001433709.1 CDS Rcas_3642 NC_009767.1 4764581 4765648 R PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: mxa:MXAN_4620 hypothetical protein; type 11 methyltransferase complement(4764581..4765648) Roseiflexus castenholzii DSM 13941 5541144 YP_001433710.1 CDS Rcas_3643 NC_009767.1 4765645 4766976 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4089 ABC transporter related; ABC transporter-like protein complement(4765645..4766976) Roseiflexus castenholzii DSM 13941 5541145 YP_001433711.1 CDS Rcas_3644 NC_009767.1 4767574 4769010 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4094 glycosyl transferase, group 1; group 1 glycosyl transferase complement(4767574..4769010) Roseiflexus castenholzii DSM 13941 5541146 YP_001433712.1 CDS Rcas_3645 NC_009767.1 4769672 4770832 R PFAM: glycosyl transferase group 1; KEGG: gbe:GbCGDNIH1_0743 glycosyltransferase; group 1 glycosyl transferase complement(4769672..4770832) Roseiflexus castenholzii DSM 13941 5541147 YP_001433713.1 CDS Rcas_3646 NC_009767.1 4770837 4772360 R PFAM: glycosyl transferase family 2; Methyltransferase type 11; KEGG: syn:slr2120 hypothetical protein; glycosyl transferase family protein complement(4770837..4772360) Roseiflexus castenholzii DSM 13941 5541148 YP_001433714.1 CDS Rcas_3647 NC_009767.1 4773406 4774560 R PFAM: glycosyl transferase group 1; KEGG: ssa:SSA_1513 glycosyltransferase; group 1 glycosyl transferase complement(4773406..4774560) Roseiflexus castenholzii DSM 13941 5541149 YP_001433715.1 CDS Rcas_3648 NC_009767.1 4774557 4776773 R PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mxa:MXAN_4616 glycosyl transferase family protein; glycosyl transferase family protein complement(4774557..4776773) Roseiflexus castenholzii DSM 13941 5541150 YP_001433716.1 CDS Rcas_3649 NC_009767.1 4776810 4778912 R PFAM: Polymorphic membrane protein Chlamydia; Fibronectin type III domain protein; KEGG: rba:RB4375 probable extracellular nuclease; fibronectin type III domain-containing protein complement(4776810..4778912) Roseiflexus castenholzii DSM 13941 5541151 YP_001433717.1 CDS Rcas_3650 NC_009767.1 4779329 4780180 R PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_4096 ABC-2 type transporter; ABC-2 type transporter complement(4779329..4780180) Roseiflexus castenholzii DSM 13941 5541152 YP_001433718.1 CDS Rcas_3651 NC_009767.1 4780587 4781729 D KEGG: noc:Noc_0388 transposase (probable), IS891/IS1136/IS1341; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; IS605 family transposase OrfB 4780587..4781729 Roseiflexus castenholzii DSM 13941 5541153 YP_001433719.1 CDS Rcas_3652 NC_009767.1 4781793 4782374 R KEGG: rrs:RoseRS_4097 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase complement(4781793..4782374) Roseiflexus castenholzii DSM 13941 5541154 YP_001433720.1 CDS Rcas_3653 NC_009767.1 4782629 4783042 R PFAM: protein of unknown function DUF86; KEGG: rrs:RoseRS_4098 protein of unknown function DUF86; hypothetical protein complement(4782629..4783042) Roseiflexus castenholzii DSM 13941 5541155 YP_001433721.1 CDS Rcas_3654 NC_009767.1 4783032 4783445 R KEGG: rrs:RoseRS_4099 hypothetical protein; hypothetical protein complement(4783032..4783445) Roseiflexus castenholzii DSM 13941 5541156 YP_001433722.1 CDS Rcas_3655 NC_009767.1 4783442 4784386 R PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2241 protein of unknown function DUF820; hypothetical protein complement(4783442..4784386) Roseiflexus castenholzii DSM 13941 5541157 YP_001433723.1 CDS Rcas_3656 NC_009767.1 4784414 4785391 R PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_4100 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(4784414..4785391) Roseiflexus castenholzii DSM 13941 5541158 YP_001433724.1 CDS Rcas_3657 NC_009767.1 4785657 4786214 R KEGG: rrs:RoseRS_4101 hypothetical protein; hypothetical protein complement(4785657..4786214) Roseiflexus castenholzii DSM 13941 5541159 YP_001433725.1 CDS Rcas_3658 NC_009767.1 4786294 4786878 R PFAM: response regulator receiver; ANTAR domain protein; KEGG: rrs:RoseRS_4102 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein complement(4786294..4786878) Roseiflexus castenholzii DSM 13941 5541160 YP_001433726.1 CDS Rcas_3659 NC_009767.1 4787064 4787882 D TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: rrs:RoseRS_4051 biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 4787064..4787882 Roseiflexus castenholzii DSM 13941 5541161 YP_001433727.1 CDS Rcas_3660 NC_009767.1 4789216 4789572 R KEGG: rrs:RoseRS_4050 hypothetical protein; hypothetical protein complement(4789216..4789572) Roseiflexus castenholzii DSM 13941 5541162 YP_001433728.1 CDS Rcas_3661 NC_009767.1 4789613 4790293 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_4049 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(4789613..4790293) Roseiflexus castenholzii DSM 13941 5541163 YP_001433729.1 CDS Rcas_3662 NC_009767.1 4790428 4791219 D PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_4048 conserved hypothetical protein 730; hypothetical protein 4790428..4791219 Roseiflexus castenholzii DSM 13941 5541164 YP_001433730.1 CDS Rcas_3663 NC_009767.1 4791352 4792056 R KEGG: rrs:RoseRS_4047 hypothetical protein; hypothetical protein complement(4791352..4792056) Roseiflexus castenholzii DSM 13941 5541165 YP_001433731.1 CDS Rcas_3664 NC_009767.1 4792077 4793141 R KEGG: rrs:RoseRS_4046 hypothetical protein; hypothetical protein complement(4792077..4793141) Roseiflexus castenholzii DSM 13941 5541166 YP_001433732.1 CDS Rcas_3665 NC_009767.1 4793365 4794456 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_4045 glycosyl transferase, group 1; group 1 glycosyl transferase 4793365..4794456 Roseiflexus castenholzii DSM 13941 5541167 YP_001433733.1 CDS Rcas_3666 NC_009767.1 4794596 4795222 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4044 hypothetical protein; lipopolysaccharide biosynthesis protein 4794596..4795222 Roseiflexus castenholzii DSM 13941 5541168 YP_001433734.1 CDS Rcas_3667 NC_009767.1 4795224 4795913 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: rrs:RoseRS_4043 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 4795224..4795913 Roseiflexus castenholzii DSM 13941 5541169 YP_001433735.1 CDS Rcas_3668 NC_009767.1 4795910 4796611 D KEGG: rrs:RoseRS_4042 non-specific protein-tyrosine kinase; non-specific protein-tyrosine kinase 4795910..4796611 Roseiflexus castenholzii DSM 13941 5541170 YP_001433736.1 CDS Rcas_3669 NC_009767.1 4796836 4797219 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_4041 response regulator receiver protein; response regulator receiver protein 4796836..4797219 Roseiflexus castenholzii DSM 13941 5541171 YP_001433737.1 CDS Rcas_3670 NC_009767.1 4797258 4798610 R KEGG: rrs:RoseRS_4040 hypothetical protein; hypothetical protein complement(4797258..4798610) Roseiflexus castenholzii DSM 13941 5541172 YP_001433738.1 CDS Rcas_3671 NC_009767.1 4799130 4802234 R PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_4039 multi-sensor hybrid histidine kinase; multi-sensor hybrid histidine kinase complement(4799130..4802234) Roseiflexus castenholzii DSM 13941 5541173 YP_001433739.1 CDS Rcas_3672 NC_009767.1 4802385 4803659 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rrs:RoseRS_4038 cystathionine gamma-synthase; cystathionine gamma-lyase complement(4802385..4803659) Roseiflexus castenholzii DSM 13941 5541174 YP_001433740.1 CDS Rcas_3673 NC_009767.1 4803705 4804409 R PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_4037 metallophosphoesterase; metallophosphoesterase complement(4803705..4804409) Roseiflexus castenholzii DSM 13941 5541175 YP_001433741.1 CDS Rcas_3674 NC_009767.1 4804692 4805714 R SMART: serine/threonine protein kinase; KEGG: rrs:RoseRS_4032 protein kinase; serine/threonine protein kinase complement(4804692..4805714) Roseiflexus castenholzii DSM 13941 5541176 YP_001433742.1 CDS Rcas_3675 NC_009767.1 4805711 4806166 R KEGG: rrs:RoseRS_4031 hypothetical protein; hypothetical protein complement(4805711..4806166) Roseiflexus castenholzii DSM 13941 5541177 YP_001433743.1 CDS Rcas_3676 NC_009767.1 4807955 4810078 R KEGG: rrs:RoseRS_4030 hypothetical protein; hypothetical protein complement(4807955..4810078) Roseiflexus castenholzii DSM 13941 5541178 YP_001433744.1 CDS Rcas_3677 NC_009767.1 4810382 4812460 R KEGG: rrs:RoseRS_4029 transcriptional regulator, MerR family; MerR family transcriptional regulator complement(4810382..4812460) Roseiflexus castenholzii DSM 13941 5541179 YP_001433745.1 CDS Rcas_3678 NC_009767.1 4813196 4814074 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_4028 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4813196..4814074 Roseiflexus castenholzii DSM 13941 5541180 YP_001433746.1 CDS Rcas_3679 NC_009767.1 4814028 4814678 R PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_4027 cyclic nucleotide-binding protein; Crp/FNR family transcriptional regulator complement(4814028..4814678) Roseiflexus castenholzii DSM 13941 5541181 YP_001433747.1 CDS Rcas_3680 NC_009767.1 4814919 4815446 D PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_4026 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4814919..4815446 Roseiflexus castenholzii DSM 13941 5541182 YP_001433748.1 CDS Rcas_3681 NC_009767.1 4816203 4816934 D PFAM: peptidase C60 sortase A and B; KEGG: rrs:RoseRS_3728 peptidase C60, sortase A and B; peptidase C60 sortase A and B 4816203..4816934 Roseiflexus castenholzii DSM 13941 5541183 YP_001433749.1 CDS Rcas_3682 NC_009767.1 4817678 4818814 D PFAM: peptidase M50; KEGG: rrs:RoseRS_1247 peptidase M50; peptidase M50 4817678..4818814 Roseiflexus castenholzii DSM 13941 5541184 YP_001433750.1 CDS Rcas_3684 NC_009767.1 4820380 4821753 D PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_1246 nucleotidyl transferase; nucleotidyl transferase 4820380..4821753 Roseiflexus castenholzii DSM 13941 5541186 YP_001433751.1 CDS Rcas_3686 NC_009767.1 4824131 4824355 D KEGG: rrs:RoseRS_1996 prevent-host-death family protein; prevent-host-death family protein 4824131..4824355 Roseiflexus castenholzii DSM 13941 5541188 YP_001433752.1 CDS Rcas_3687 NC_009767.1 4824352 4824738 D PFAM: PilT protein domain protein; KEGG: rrs:RoseRS_1995 PilT protein domain protein; twitching motility protein PilT 4824352..4824738 Roseiflexus castenholzii DSM 13941 5541189 YP_001433753.1 CDS Rcas_3690 NC_009767.1 4828883 4829320 D hypothetical protein 4828883..4829320 Roseiflexus castenholzii DSM 13941 5541192 YP_001433754.1 CDS Rcas_3691 NC_009767.1 4829376 4829879 D hypothetical protein 4829376..4829879 Roseiflexus castenholzii DSM 13941 5541193 YP_001433755.1 CDS Rcas_3693 NC_009767.1 4830307 4831305 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ecs:ECs4134 methyltransferase; DNA methylase N-4/N-6 domain-containing protein 4830307..4831305 Roseiflexus castenholzii DSM 13941 5541195 YP_001433756.1 CDS Rcas_3694 NC_009767.1 4831302 4832258 D hypothetical protein 4831302..4832258 Roseiflexus castenholzii DSM 13941 5541196 YP_001433757.1 CDS Rcas_3699 NC_009767.1 4835683 4836588 D hypothetical protein 4835683..4836588 Roseiflexus castenholzii DSM 13941 5541201 YP_001433758.1 CDS Rcas_3700 NC_009767.1 4836618 4837307 R hypothetical protein complement(4836618..4837307) Roseiflexus castenholzii DSM 13941 5541202 YP_001433759.1 CDS Rcas_3701 NC_009767.1 4837476 4840670 R PFAM: TPR repeat-containing protein; transcriptional regulator domain protein; transcriptional activator domain; Tetratricopeptide TPR_4; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein; SARP family transcriptional regulator complement(4837476..4840670) Roseiflexus castenholzii DSM 13941 5541203 YP_001433760.1 CDS Rcas_3702 NC_009767.1 4840692 4841318 R PFAM: protein of unknown function DUF1568; KEGG: sus:Acid_5308 protein of unknown function DUF1568; hypothetical protein complement(4840692..4841318) Roseiflexus castenholzii DSM 13941 5541204 YP_001433761.1 CDS Rcas_3703 NC_009767.1 4841764 4853832 D SMART: Dystroglycan-type cadherin domain protein; PA14-related domain protein; KEGG: rso:RS05070 hemagglutinin/hemolysin-related protein; dystroglycan-type cadherin domain-containing protein 4841764..4853832 Roseiflexus castenholzii DSM 13941 5541205 YP_001433762.1 CDS Rcas_3704 NC_009767.1 4854278 4854784 D KEGG: tel:tlr0976 hypothetical protein; hypothetical protein 4854278..4854784 Roseiflexus castenholzii DSM 13941 5541206 YP_001433763.1 CDS Rcas_3705 NC_009767.1 4854775 4859127 R PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1245 NB-ARC domain protein; hypothetical protein complement(4854775..4859127) Roseiflexus castenholzii DSM 13941 5541207 YP_001433764.1 CDS Rcas_3706 NC_009767.1 4859124 4859483 R KEGG: rrs:RoseRS_1244 hypothetical protein; hypothetical protein complement(4859124..4859483) Roseiflexus castenholzii DSM 13941 5541208 YP_001433765.1 CDS Rcas_3707 NC_009767.1 4860112 4860564 R PFAM: NUDIX hydrolase; KEGG: rrs:RoseRS_3219 NUDIX hydrolase; NUDIX hydrolase complement(4860112..4860564) Roseiflexus castenholzii DSM 13941 5541209 YP_001433766.1 CDS Rcas_3708 NC_009767.1 4860582 4861136 R PFAM: Inorganic pyrophosphatase; KEGG: rrs:RoseRS_3220 inorganic diphosphatase; inorganic diphosphatase complement(4860582..4861136) Roseiflexus castenholzii DSM 13941 5541210 YP_001433767.1 CDS Rcas_3709 NC_009767.1 4861499 4862458 R PFAM: protein of unknown function DUF124; KEGG: rrs:RoseRS_3221 protein of unknown function DUF124; hypothetical protein complement(4861499..4862458) Roseiflexus castenholzii DSM 13941 5541211 YP_001433768.1 CDS rho NC_009767.1 4862737 4864074 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(4862737..4864074) Roseiflexus castenholzii DSM 13941 5541212 YP_001433769.1 CDS alaS NC_009767.1 4864674 4867391 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 4864674..4867391 Roseiflexus castenholzii DSM 13941 5541213 YP_001433770.1 CDS Rcas_3712 NC_009767.1 4867409 4869403 D KEGG: rrs:RoseRS_3224 hypothetical protein; hypothetical protein 4867409..4869403 Roseiflexus castenholzii DSM 13941 5541214 YP_001433771.1 CDS Rcas_3713 NC_009767.1 4869432 4869872 D PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: rrs:RoseRS_3225 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 4869432..4869872 Roseiflexus castenholzii DSM 13941 5541215 YP_001433772.1 CDS Rcas_3714 NC_009767.1 4869826 4870410 R KEGG: rrs:RoseRS_3226 hypothetical protein; hypothetical protein complement(4869826..4870410) Roseiflexus castenholzii DSM 13941 5541216 YP_001433773.1 CDS Rcas_3715 NC_009767.1 4871871 4872737 R PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rrs:RoseRS_3227 6-phosphogluconate dehydrogenase, NAD-binding; NADP oxidoreductase coenzyme F420-dependent complement(4871871..4872737) Roseiflexus castenholzii DSM 13941 5541217 YP_001433774.1 CDS Rcas_3716 NC_009767.1 4875108 4876097 R PFAM: peptidase S58 DmpA; KEGG: rrs:RoseRS_3228 peptidase S58, DmpA; peptidase S58 DmpA complement(4875108..4876097) Roseiflexus castenholzii DSM 13941 5541218 YP_001433775.1 CDS Rcas_3717 NC_009767.1 4876100 4876906 R PFAM: DSBA oxidoreductase; KEGG: rrs:RoseRS_3229 DsbA oxidoreductase; DSBA oxidoreductase complement(4876100..4876906) Roseiflexus castenholzii DSM 13941 5541219 YP_001433776.1 CDS Rcas_3718 NC_009767.1 4876908 4877417 R KEGG: rrs:RoseRS_3230 hypothetical protein; hypothetical protein complement(4876908..4877417) Roseiflexus castenholzii DSM 13941 5541220 YP_001433777.1 CDS Rcas_3719 NC_009767.1 4877488 4877835 R PFAM: protein of unknown function DUF970; KEGG: rrs:RoseRS_3231 protein of unknown function DUF970; hypothetical protein complement(4877488..4877835) Roseiflexus castenholzii DSM 13941 5541221 YP_001433778.1 CDS Rcas_3720 NC_009767.1 4877845 4878534 R PFAM: thymidylate kinase; KEGG: rrs:RoseRS_3232 dTMP kinase; dTMP kinase complement(4877845..4878534) Roseiflexus castenholzii DSM 13941 5541222 YP_001433779.1 CDS Rcas_3721 NC_009767.1 4878561 4880177 R PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_3233 single-stranded nucleic acid binding R3H domain protein; single-stranded nucleic acid binding R3H domain-containing protein complement(4878561..4880177) Roseiflexus castenholzii DSM 13941 5541223 YP_001433780.1 CDS Rcas_3722 NC_009767.1 4880098 4881168 R KEGG: rrs:RoseRS_3234 hypothetical protein; hypothetical protein complement(4880098..4881168) Roseiflexus castenholzii DSM 13941 5541224 YP_001433781.1 CDS Rcas_3723 NC_009767.1 4881196 4881765 R PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: rrs:RoseRS_3235 SNO glutamine amidotransferase; SNO glutamine amidotransferase complement(4881196..4881765) Roseiflexus castenholzii DSM 13941 5541225 YP_001433782.1 CDS Rcas_3724 NC_009767.1 4881815 4882696 R with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate; pyridoxal biosynthesis lyase PdxS complement(4881815..4882696) Roseiflexus castenholzii DSM 13941 5541226 YP_001433783.1 CDS Rcas_3725 NC_009767.1 4882882 4883487 R PFAM: manganese and iron superoxide dismutase; KEGG: rrs:RoseRS_3237 superoxide dismutase; superoxide dismutase complement(4882882..4883487) Roseiflexus castenholzii DSM 13941 5541227 YP_001433784.1 CDS Rcas_3726 NC_009767.1 4883531 4884169 R PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: rrs:RoseRS_3238 transcriptional regulator; transcriptional regulator complement(4883531..4884169) Roseiflexus castenholzii DSM 13941 5541228 YP_001433785.1 CDS Rcas_3727 NC_009767.1 4884326 4885102 D PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_3239 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 4884326..4885102 Roseiflexus castenholzii DSM 13941 5541229 YP_001433786.1 CDS Rcas_3728 NC_009767.1 4885115 4886278 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: rrs:RoseRS_3240 aminotransferase, class I and II; class I/II aminotransferase 4885115..4886278 Roseiflexus castenholzii DSM 13941 5541230 YP_001433787.1 CDS Rcas_3729 NC_009767.1 4886301 4886651 D KEGG: rrs:RoseRS_3241 hypothetical protein; hypothetical protein 4886301..4886651 Roseiflexus castenholzii DSM 13941 5541231 YP_001433788.1 CDS Rcas_3730 NC_009767.1 4886663 4887346 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3242 glycosyl transferase, family 2; glycosyl transferase family protein 4886663..4887346 Roseiflexus castenholzii DSM 13941 5541232 YP_001433789.1 CDS Rcas_3731 NC_009767.1 4888956 4889429 R catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase complement(4888956..4889429) Roseiflexus castenholzii DSM 13941 5541233 YP_001433790.1 CDS Rcas_3732 NC_009767.1 4889426 4894894 R SMART: Parallel beta-helix repeat; KEGG: rrs:RoseRS_3244 parallel beta-helix repeat; parallel beta-helix repeat-containing protein complement(4889426..4894894) Roseiflexus castenholzii DSM 13941 5541234 YP_001433791.1 CDS Rcas_3733 NC_009767.1 4894910 4899229 R TIGRFAM: conserved repeat domain; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: rrs:RoseRS_3245 hypothetical protein; hypothetical protein complement(4894910..4899229) Roseiflexus castenholzii DSM 13941 5541235 YP_001433792.1 CDS Rcas_3734 NC_009767.1 4899496 4901364 D KEGG: rrs:RoseRS_3246 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 4899496..4901364 Roseiflexus castenholzii DSM 13941 5541236 YP_001433793.1 CDS Rcas_3735 NC_009767.1 4901919 4902476 D PFAM: Colicin V production protein; KEGG: rrs:RoseRS_3247 colicin V production protein; colicin V production protein 4901919..4902476 Roseiflexus castenholzii DSM 13941 5541237 YP_001433794.1 CDS Rcas_3736 NC_009767.1 4902666 4903868 R KEGG: rrs:RoseRS_0889 hypothetical protein; hypothetical protein complement(4902666..4903868) Roseiflexus castenholzii DSM 13941 5541238 YP_001433795.1 CDS Rcas_3737 NC_009767.1 4904936 4905250 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rrs:RoseRS_3248 iojap-like protein; iojap family protein 4904936..4905250 Roseiflexus castenholzii DSM 13941 5541239 YP_001433796.1 CDS Rcas_3738 NC_009767.1 4905263 4905451 D KEGG: rrs:RoseRS_3249 hypothetical protein; hypothetical protein 4905263..4905451 Roseiflexus castenholzii DSM 13941 5541240 YP_001433797.1 CDS Rcas_3739 NC_009767.1 4905509 4906381 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: rrs:RoseRS_3250 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(4905509..4906381) Roseiflexus castenholzii DSM 13941 5541241 YP_001433798.1 CDS Rcas_3740 NC_009767.1 4906458 4907180 R PFAM: alanine racemase domain protein; KEGG: rrs:RoseRS_3251 alanine racemase domain protein; alanine racemase complement(4906458..4907180) Roseiflexus castenholzii DSM 13941 5541242 YP_001433799.1 CDS Rcas_3741 NC_009767.1 4907244 4907732 D PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: rrs:RoseRS_3252 protein tyrosine phosphatase; protein tyrosine phosphatase 4907244..4907732 Roseiflexus castenholzii DSM 13941 5541243 YP_001433800.1 CDS Rcas_3742 NC_009767.1 4907767 4908840 D KEGG: syn:sll1755 hypothetical protein; hypothetical protein 4907767..4908840 Roseiflexus castenholzii DSM 13941 5541244 YP_001433801.1 CDS Rcas_3743 NC_009767.1 4908844 4910325 R TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: rrs:RoseRS_3256 chlorophyllide reductase subunit Z; chlorophyllide reductase subunit Z complement(4908844..4910325) Roseiflexus castenholzii DSM 13941 5541245 YP_001433802.1 CDS Rcas_3744 NC_009767.1 4910332 4911600 R TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: rrs:RoseRS_3257 chlorophyllide reductase subunit Y; chlorophyllide reductase subunit Y complement(4910332..4911600) Roseiflexus castenholzii DSM 13941 5541246 YP_001433803.1 CDS Rcas_3745 NC_009767.1 4912703 4913434 R PFAM: protein of unknown function DUF169; KEGG: rrs:RoseRS_3259 protein of unknown function DUF169; hypothetical protein complement(4912703..4913434) Roseiflexus castenholzii DSM 13941 5541247 YP_001433804.1 CDS Rcas_3746 NC_009767.1 4914721 4915899 R KEGG: rrs:RoseRS_3260 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein; chlorophyllide reductase iron protein subunit X complement(4914721..4915899) Roseiflexus castenholzii DSM 13941 5541248 YP_001433805.1 CDS Rcas_3747 NC_009767.1 4916366 4917337 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_3261 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase complement(4916366..4917337) Roseiflexus castenholzii DSM 13941 5541249 YP_001433806.1 CDS Rcas_3748 NC_009767.1 4917350 4917832 R PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: rrs:RoseRS_3262 2-vinyl bacteriochlorophyllide hydratase; 2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit CD complement(4917350..4917832) Roseiflexus castenholzii DSM 13941 5541250 YP_001433807.1 CDS Rcas_3749 NC_009767.1 4918126 4918971 D PFAM: UspA domain protein; KEGG: rrs:RoseRS_3263 UspA domain protein; UspA domain-containing protein 4918126..4918971 Roseiflexus castenholzii DSM 13941 5541251 YP_001433808.1 CDS Rcas_3750 NC_009767.1 4918952 4919719 R KEGG: rrs:RoseRS_3264 hypothetical protein; hypothetical protein complement(4918952..4919719) Roseiflexus castenholzii DSM 13941 5541252 YP_001433809.1 CDS Rcas_3751 NC_009767.1 4919750 4920970 R TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: rrs:RoseRS_3265 geranylgeranyl reductase; geranylgeranyl reductase complement(4919750..4920970) Roseiflexus castenholzii DSM 13941 5541253 YP_001433810.1 CDS Rcas_3752 NC_009767.1 4922397 4923311 R TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_3266 bacteriochlorophyll/chlorophyll synthetase; bacteriochlorophyll/chlorophyll a synthase complement(4922397..4923311) Roseiflexus castenholzii DSM 13941 5541254 YP_001433811.1 CDS Rcas_3753 NC_009767.1 4923456 4924418 R KEGG: rrs:RoseRS_3267 hypothetical protein; hypothetical protein complement(4923456..4924418) Roseiflexus castenholzii DSM 13941 5541255 YP_001433812.1 CDS Rcas_3754 NC_009767.1 4924518 4926443 R TIGRFAM: photosynthetic reaction center, M subunit; photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: rrs:RoseRS_3268 photosynthetic reaction center, M subunit; bifunctional photosynthetic reaction center subunit L/M complement(4924518..4926443) Roseiflexus castenholzii DSM 13941 5541256 YP_001433813.1 CDS Rcas_3756 NC_009767.1 4926835 4927002 R PFAM: antenna complex alpha/beta subunit; KEGG: rrs:RoseRS_3270 antenna complex, alpha/beta subunit; antenna complex alpha/subunit beta complement(4926835..4927002) Roseiflexus castenholzii DSM 13941 5541258 YP_001433814.1 CDS Rcas_3757 NC_009767.1 4927506 4928507 D PFAM: regulatory protein MerR; KEGG: rrs:RoseRS_3271 transcriptional regulator, MerR family; MerR family transcriptional regulator 4927506..4928507 Roseiflexus castenholzii DSM 13941 5541259 YP_001433815.1 CDS Rcas_3758 NC_009767.1 4928574 4929038 D KEGG: rrs:RoseRS_3272 hypothetical protein; hypothetical protein 4928574..4929038 Roseiflexus castenholzii DSM 13941 5541260 YP_001433816.1 CDS Rcas_3759 NC_009767.1 4929082 4930017 R PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rrs:RoseRS_3273 transglutaminase, N-terminal domain protein; transglutaminase domain-containing protein complement(4929082..4930017) Roseiflexus castenholzii DSM 13941 5541261 YP_001433817.1 CDS Rcas_3760 NC_009767.1 4931187 4932146 R PFAM: protein of unknown function DUF403; KEGG: rrs:RoseRS_3275 protein of unknown function DUF403; hypothetical protein complement(4931187..4932146) Roseiflexus castenholzii DSM 13941 5541262 YP_001433818.1 CDS Rcas_3761 NC_009767.1 4932139 4933569 R PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rrs:RoseRS_3276 protein of unknown function DUF404; hypothetical protein complement(4932139..4933569) Roseiflexus castenholzii DSM 13941 5541263 YP_001433819.1 CDS Rcas_3762 NC_009767.1 4934094 4935113 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: rrs:RoseRS_3277 histidine kinase; histidine kinase 4934094..4935113 Roseiflexus castenholzii DSM 13941 5541264 YP_001433820.1 CDS Rcas_3763 NC_009767.1 4935110 4935775 D PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3278 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 4935110..4935775 Roseiflexus castenholzii DSM 13941 5541265 YP_001433821.1 CDS Rcas_3764 NC_009767.1 4935775 4936605 D KEGG: rrs:RoseRS_3279 hypothetical protein; hypothetical protein 4935775..4936605 Roseiflexus castenholzii DSM 13941 5541266 YP_001433822.1 CDS Rcas_3765 NC_009767.1 4937501 4938415 D TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3280 ribokinase; ribokinase 4937501..4938415 Roseiflexus castenholzii DSM 13941 5541267 YP_001433823.1 CDS Rcas_3766 NC_009767.1 4938419 4939108 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3281 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 4938419..4939108 Roseiflexus castenholzii DSM 13941 5541268 YP_001433824.1 CDS Rcas_3767 NC_009767.1 4939312 4939686 D PFAM: LrgA family protein; KEGG: rrs:RoseRS_3282 LrgA family protein; LrgA family protein 4939312..4939686 Roseiflexus castenholzii DSM 13941 5541269 YP_001433825.1 CDS Rcas_3768 NC_009767.1 4939667 4940389 D PFAM: LrgB family protein; KEGG: rrs:RoseRS_3283 LrgB family protein; LrgB family protein 4939667..4940389 Roseiflexus castenholzii DSM 13941 5541270 YP_001433826.1 CDS Rcas_3769 NC_009767.1 4941135 4942457 D PFAM: short-chain dehydrogenase/reductase SDR; conserved hypothetical protein; KR domain protein; KEGG: rrs:RoseRS_3285 conserved hypothetical protein 730; hypothetical protein 4941135..4942457 Roseiflexus castenholzii DSM 13941 5541271 YP_001433827.1 CDS Rcas_3770 NC_009767.1 4942487 4943746 R PFAM: glycosyl transferase family 28; KEGG: rrs:RoseRS_0907 sterol 3-beta-glucosyltransferase; sterol 3-beta-glucosyltransferase complement(4942487..4943746) Roseiflexus castenholzii DSM 13941 5541272 YP_001433828.1 CDS Rcas_3771 NC_009767.1 4943756 4944043 R PFAM: Fe(II) trafficking protein YggX; KEGG: rrs:RoseRS_0908 Fe(II) trafficking protein YggX; hypothetical protein complement(4943756..4944043) Roseiflexus castenholzii DSM 13941 5541273 YP_001433829.1 CDS Rcas_3772 NC_009767.1 4944174 4945265 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rrs:RoseRS_0909 alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 4944174..4945265 Roseiflexus castenholzii DSM 13941 5541274 YP_001433830.1 CDS Rcas_3773 NC_009767.1 4945535 4946830 D PFAM: acetyl-CoA hydrolase/transferase; KEGG: rrs:RoseRS_0911 acetyl-CoA hydrolase/transferase; acetyl-CoA hydrolase/transferase 4945535..4946830 Roseiflexus castenholzii DSM 13941 5541275 YP_001433831.1 CDS Rcas_3774 NC_009767.1 4946834 4947787 R PFAM: UspA domain protein; KEGG: rrs:RoseRS_0912 UspA domain protein; UspA domain-containing protein complement(4946834..4947787) Roseiflexus castenholzii DSM 13941 5541276 YP_001433832.1 CDS Rcas_3775 NC_009767.1 4948015 4948431 D PFAM: UspA domain protein; KEGG: rrs:RoseRS_0913 UspA domain protein; UspA domain-containing protein 4948015..4948431 Roseiflexus castenholzii DSM 13941 5541277 YP_001433833.1 CDS Rcas_3776 NC_009767.1 4948480 4949373 D PFAM: UspA domain protein; KEGG: rrs:RoseRS_0914 UspA domain protein; UspA domain-containing protein 4948480..4949373 Roseiflexus castenholzii DSM 13941 5541278 YP_001433834.1 CDS Rcas_3777 NC_009767.1 4949600 4950301 R KEGG: rrs:RoseRS_0915 phosphoribosyltransferase-like protein; phosphoribosyltransferase-like protein complement(4949600..4950301) Roseiflexus castenholzii DSM 13941 5541279 YP_001433835.1 CDS Rcas_3778 NC_009767.1 4950319 4950996 R PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0916 CBS domain containing protein; hypothetical protein complement(4950319..4950996) Roseiflexus castenholzii DSM 13941 5541280 YP_001433836.1 CDS Rcas_3779 NC_009767.1 4951452 4951940 D PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_0917 CBS domain containing protein; hypothetical protein 4951452..4951940 Roseiflexus castenholzii DSM 13941 5541281 YP_001433837.1 CDS Rcas_3780 NC_009767.1 4952173 4953060 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(4952173..4953060) Roseiflexus castenholzii DSM 13941 5541282 YP_001433838.1 CDS Rcas_3781 NC_009767.1 4953057 4954052 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rrs:RoseRS_1974 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(4953057..4954052) Roseiflexus castenholzii DSM 13941 5541283 YP_001433839.1 CDS Rcas_3782 NC_009767.1 4954067 4955191 R TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: cpf:CPF_1624 calcium/proton exchanger; calcium/cation antiporter complement(4954067..4955191) Roseiflexus castenholzii DSM 13941 5541284 YP_001433840.1 CDS Rcas_3783 NC_009767.1 4955344 4955772 D PFAM: CoA-binding domain protein; KEGG: rrs:RoseRS_1976 CoA-binding domain protein; CoA-binding domain-containing protein 4955344..4955772 Roseiflexus castenholzii DSM 13941 5541285 YP_001433841.1 CDS Rcas_3784 NC_009767.1 4955816 4956994 D PFAM: N-acylglucosamine 2-epimerase; KEGG: rrs:RoseRS_1977 N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 4955816..4956994 Roseiflexus castenholzii DSM 13941 5541286 YP_001433842.1 CDS Rcas_3785 NC_009767.1 4956938 4957693 R KEGG: rrs:RoseRS_1978 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4956938..4957693) Roseiflexus castenholzii DSM 13941 5541287 YP_001433843.1 CDS Rcas_3786 NC_009767.1 4957812 4959581 D TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: rrs:RoseRS_1979 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 4957812..4959581 Roseiflexus castenholzii DSM 13941 5541288 YP_001433844.1 CDS Rcas_3787 NC_009767.1 4959594 4960169 D TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rrs:RoseRS_1980 ATP--cobalamin adenosyltransferase; ATP--cobalamin adenosyltransferase 4959594..4960169 Roseiflexus castenholzii DSM 13941 5541289 YP_001433845.1 CDS Rcas_3788 NC_009767.1 4960383 4961033 D KEGG: rrs:RoseRS_3211 hypothetical protein; hypothetical protein 4960383..4961033 Roseiflexus castenholzii DSM 13941 5541290 YP_001433846.1 CDS Rcas_3789 NC_009767.1 4961937 4962530 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0980 protein of unknown function DUF820; hypothetical protein 4961937..4962530 Roseiflexus castenholzii DSM 13941 5541291 YP_001433847.1 CDS Rcas_3790 NC_009767.1 4962727 4963320 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_0981 protein of unknown function DUF820; hypothetical protein 4962727..4963320 Roseiflexus castenholzii DSM 13941 5541292 YP_001433848.1 CDS Rcas_3791 NC_009767.1 4963330 4964418 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: rrs:RoseRS_0979 Rieske (2Fe-2S) domain protein; Rieske (2Fe-2S) domain-containing protein complement(4963330..4964418) Roseiflexus castenholzii DSM 13941 5541293 YP_001433849.1 CDS Rcas_3792 NC_009767.1 4964557 4965705 R KEGG: sth:STH567 hypothetical protein; hypothetical protein complement(4964557..4965705) Roseiflexus castenholzii DSM 13941 5541294 YP_001433850.1 CDS Rcas_3793 NC_009767.1 4965702 4966145 R hypothetical protein complement(4965702..4966145) Roseiflexus castenholzii DSM 13941 5541295 YP_001433851.1 CDS Rcas_3794 NC_009767.1 4966145 4966600 R hypothetical protein complement(4966145..4966600) Roseiflexus castenholzii DSM 13941 5541296 YP_001433852.1 CDS Rcas_3795 NC_009767.1 4967038 4968096 R TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: rrs:RoseRS_0975 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE complement(4967038..4968096) Roseiflexus castenholzii DSM 13941 5541297 YP_001433853.1 CDS Rcas_3796 NC_009767.1 4968093 4969208 R TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: rrs:RoseRS_0974 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD complement(4968093..4969208) Roseiflexus castenholzii DSM 13941 5541298 YP_001433854.1 CDS Rcas_3797 NC_009767.1 4969205 4969474 R TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: rrs:RoseRS_0973 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF complement(4969205..4969474) Roseiflexus castenholzii DSM 13941 5541299 YP_001433855.1 CDS Rcas_3798 NC_009767.1 4969544 4970647 R PFAM: NHL repeat containing protein; KEGG: msm:MSMEG_2269 NHL repeat protein; NHL repeat-containing protein complement(4969544..4970647) Roseiflexus castenholzii DSM 13941 5541300 YP_001433856.1 CDS Rcas_3799 NC_009767.1 4970658 4971533 R PFAM: nitrogen-fixing NifU domain protein; Rieske [2Fe-2S] domain protein; KEGG: mva:Mvan_2369 Rieske (2Fe-2S) domain protein; NifU domain-containing protein complement(4970658..4971533) Roseiflexus castenholzii DSM 13941 5541301 YP_001433857.1 CDS Rcas_3800 NC_009767.1 4971557 4972027 R hypothetical protein complement(4971557..4972027) Roseiflexus castenholzii DSM 13941 5541302 YP_001433858.1 CDS Rcas_3801 NC_009767.1 4972017 4973294 R PFAM: Tetratricopeptide TPR_4; KEGG: rrs:RoseRS_0968 hypothetical protein; hypothetical protein complement(4972017..4973294) Roseiflexus castenholzii DSM 13941 5541303 YP_001433859.1 CDS Rcas_3802 NC_009767.1 4973389 4973667 D hypothetical protein 4973389..4973667 Roseiflexus castenholzii DSM 13941 5541304 YP_001433860.1 CDS Rcas_3803 NC_009767.1 4973639 4973944 R KEGG: mva:Mvan_2367 hydrogenase maturation protease; hydrogenase maturation protease complement(4973639..4973944) Roseiflexus castenholzii DSM 13941 5541305 YP_001433861.1 CDS Rcas_3804 NC_009767.1 4973931 4974404 R TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: msm:MSMEG_2264 peptidase M52, hydrogen uptake protein; hydrogenase maturation protease complement(4973931..4974404) Roseiflexus castenholzii DSM 13941 5541306 YP_001433862.1 CDS Rcas_3805 NC_009767.1 4974405 4976027 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: fra:Francci3_1076 hydrogen:quinone oxidoreductase; nickel-dependent hydrogenase large subunit complement(4974405..4976027) Roseiflexus castenholzii DSM 13941 5541307 YP_001433863.1 CDS Rcas_3806 NC_009767.1 4976055 4977026 R PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: fra:Francci3_1077 hydrogenase (NiFe) small subunit (HydA); NADH ubiquinone oxidoreductase 20 kDa subunit complement(4976055..4977026) Roseiflexus castenholzii DSM 13941 5541308 YP_001433864.1 CDS Rcas_3807 NC_009767.1 4977059 4977754 R TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: rrs:RoseRS_0972 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB complement(4977059..4977754) Roseiflexus castenholzii DSM 13941 5541309 YP_001433865.1 CDS Rcas_3808 NC_009767.1 4977732 4978643 R KEGG: rrs:RoseRS_0971 hypothetical protein; hypothetical protein complement(4977732..4978643) Roseiflexus castenholzii DSM 13941 5541310 YP_001433866.1 CDS Rcas_3809 NC_009767.1 4979268 4980485 R KEGG: rrs:RoseRS_0968 hypothetical protein; hypothetical protein complement(4979268..4980485) Roseiflexus castenholzii DSM 13941 5541311 YP_001433867.1 CDS Rcas_3810 NC_009767.1 4980573 4980989 R TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: rrs:RoseRS_0967 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA complement(4980573..4980989) Roseiflexus castenholzii DSM 13941 5541312 YP_001433868.1 CDS Rcas_3811 NC_009767.1 4981210 4982019 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_0966 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(4981210..4982019) Roseiflexus castenholzii DSM 13941 5541313 YP_001433869.1 CDS Rcas_3812 NC_009767.1 4982032 4982979 R KEGG: rrs:RoseRS_0965 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase complement(4982032..4982979) Roseiflexus castenholzii DSM 13941 5541314 YP_001433870.1 CDS Rcas_3813 NC_009767.1 4983561 4984823 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rpa:RPA3350 aminotransferase; glutamine--scyllo-inositol transaminase 4983561..4984823 Roseiflexus castenholzii DSM 13941 5541315 YP_001433871.1 CDS Rcas_3815 NC_009767.1 4986366 4986794 D KEGG: rrs:RoseRS_1885 hypothetical protein; hypothetical protein 4986366..4986794 Roseiflexus castenholzii DSM 13941 5541318 YP_001433872.1 CDS Rcas_3816 NC_009767.1 4986806 4988614 D KEGG: rrs:RoseRS_1886 hypothetical protein; hypothetical protein 4986806..4988614 Roseiflexus castenholzii DSM 13941 5541319 YP_001433873.1 CDS Rcas_3817 NC_009767.1 4988621 4988860 D KEGG: rrs:RoseRS_1887 hypothetical protein; hypothetical protein 4988621..4988860 Roseiflexus castenholzii DSM 13941 5541320 YP_001433874.1 CDS Rcas_3818 NC_009767.1 4988873 4989877 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_1888 ATPase associated with various cellular activities, AAA_3; ATPase 4988873..4989877 Roseiflexus castenholzii DSM 13941 5541321 YP_001433875.1 CDS Rcas_3819 NC_009767.1 4990144 4991034 D KEGG: rrs:RoseRS_1889 protein of unknown function DUF58; hypothetical protein 4990144..4991034 Roseiflexus castenholzii DSM 13941 5541322 YP_001433876.1 CDS Rcas_3820 NC_009767.1 4991048 4992982 D TIGRFAM: conserved hypothetical membrane protein; PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1890 hypothetical protein; hypothetical protein 4991048..4992982 Roseiflexus castenholzii DSM 13941 5541323 YP_001433877.1 CDS Rcas_3821 NC_009767.1 4992984 4995794 D PFAM: von Willebrand factor type A; KEGG: rrs:RoseRS_1891 von Willebrand factor, type A; von Willebrand factor A 4992984..4995794 Roseiflexus castenholzii DSM 13941 5541324 YP_001433878.1 CDS Rcas_3822 NC_009767.1 4996500 4996976 D KEGG: rrs:RoseRS_1893 hypothetical protein; hypothetical protein 4996500..4996976 Roseiflexus castenholzii DSM 13941 5541325 YP_001433879.1 CDS Rcas_3823 NC_009767.1 4997170 4998204 D PFAM: aminoglycoside phosphotransferase; KEGG: rrs:RoseRS_1892 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4997170..4998204 Roseiflexus castenholzii DSM 13941 5541326 YP_001433880.1 CDS Rcas_3824 NC_009767.1 4998394 4998813 R PFAM: CBS domain containing protein; KEGG: rrs:RoseRS_1895 CBS domain containing protein; hypothetical protein complement(4998394..4998813) Roseiflexus castenholzii DSM 13941 5541327 YP_001433881.1 CDS Rcas_3825 NC_009767.1 4998972 4999280 R KEGG: rrs:RoseRS_1896 hypothetical protein; hypothetical protein complement(4998972..4999280) Roseiflexus castenholzii DSM 13941 5541328 YP_001433882.1 CDS Rcas_3826 NC_009767.1 4999461 5000939 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_1897 GAF sensor signal transduction histidine kinase; GAF sensor signal transduction histidine kinase 4999461..5000939 Roseiflexus castenholzii DSM 13941 5541329 YP_001433883.1 CDS Rcas_3827 NC_009767.1 5001354 5001755 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_1955 response regulator receiver protein; response regulator receiver protein 5001354..5001755 Roseiflexus castenholzii DSM 13941 5541330 YP_001433884.1 CDS Rcas_3828 NC_009767.1 5001779 5002408 R KEGG: rrs:RoseRS_1954 hypothetical protein; hypothetical protein complement(5001779..5002408) Roseiflexus castenholzii DSM 13941 5541331 YP_001433885.1 CDS Rcas_3829 NC_009767.1 5002412 5004385 R AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase complement(5002412..5004385) Roseiflexus castenholzii DSM 13941 5541332 YP_001433886.1 CDS Rcas_3830 NC_009767.1 5004407 5005483 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(5004407..5005483) Roseiflexus castenholzii DSM 13941 5541333 YP_001433887.1 CDS Rcas_3831 NC_009767.1 5005503 5006897 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1951 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(5005503..5006897) Roseiflexus castenholzii DSM 13941 5541334 YP_001433888.1 CDS Rcas_3832 NC_009767.1 5006921 5008591 R PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_1950 amidohydrolase 3; amidohydrolase complement(5006921..5008591) Roseiflexus castenholzii DSM 13941 5541335 YP_001433889.1 CDS Rcas_3833 NC_009767.1 5008785 5010983 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: rrs:RoseRS_1949 diguanylate cyclase; GAF sensor-containing diguanylate cyclase 5008785..5010983 Roseiflexus castenholzii DSM 13941 5541336 YP_001433890.1 CDS Rcas_3834 NC_009767.1 5011137 5013722 R TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_1948 penicillin-binding protein, 1A family; 1A family penicillin-binding protein complement(5011137..5013722) Roseiflexus castenholzii DSM 13941 5541337 YP_001433891.1 CDS Rcas_3835 NC_009767.1 5013808 5014626 R KEGG: rrs:RoseRS_1947 hypothetical protein; hypothetical protein complement(5013808..5014626) Roseiflexus castenholzii DSM 13941 5541338 YP_001433892.1 CDS Rcas_3836 NC_009767.1 5014807 5015658 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 5014807..5015658 Roseiflexus castenholzii DSM 13941 5541339 YP_001433893.1 CDS Rcas_3837 NC_009767.1 5015624 5016199 R KEGG: rrs:RoseRS_1943 hypothetical protein; hypothetical protein complement(5015624..5016199) Roseiflexus castenholzii DSM 13941 5541340 YP_001433894.1 CDS Rcas_3838 NC_009767.1 5016209 5017093 R KEGG: rrs:RoseRS_1942 hypothetical protein; hypothetical protein complement(5016209..5017093) Roseiflexus castenholzii DSM 13941 5541341 YP_001433895.1 CDS Rcas_3840 NC_009767.1 5019819 5020715 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease; binding-protein-dependent transport system inner membrane protein complement(5019819..5020715) Roseiflexus castenholzii DSM 13941 5541344 YP_001433896.1 CDS Rcas_3841 NC_009767.1 5020708 5021658 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_B0720 ABC-type transporter, permease component: PepT family; binding-protein-dependent transport system inner membrane protein complement(5020708..5021658) Roseiflexus castenholzii DSM 13941 5541345 YP_001433897.1 CDS Rcas_3842 NC_009767.1 5021678 5023384 R PFAM: extracellular solute-binding protein family 5; KEGG: fnu:FN0396 dipeptide-binding protein; extracellular solute-binding protein complement(5021678..5023384) Roseiflexus castenholzii DSM 13941 5541346 YP_001433898.1 CDS Rcas_3843 NC_009767.1 5023605 5024924 R PFAM: aminotransferase class-III; KEGG: pai:PAE0594 glutamate-1-semialdehyde aminotransferase (hemL); class III aminotransferase complement(5023605..5024924) Roseiflexus castenholzii DSM 13941 5541347 YP_001433899.1 CDS Rcas_3844 NC_009767.1 5024921 5025703 R PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: swi:Swit_0278 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(5024921..5025703) Roseiflexus castenholzii DSM 13941 5541348 YP_001433900.1 CDS Rcas_3845 NC_009767.1 5026004 5027698 D PFAM: extracellular solute-binding protein family 5; KEGG: xac:XAC0856 ABC transporter oligopeptide binding protein; extracellular solute-binding protein 5026004..5027698 Roseiflexus castenholzii DSM 13941 5541349 YP_001433901.1 CDS Rcas_3846 NC_009767.1 5027899 5028822 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_2185 ABC transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein 5027899..5028822 Roseiflexus castenholzii DSM 13941 5541350 YP_001433902.1 CDS Rcas_3847 NC_009767.1 5028836 5029729 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0398 dipeptide transport system permease dppC; binding-protein-dependent transport system inner membrane protein 5028836..5029729 Roseiflexus castenholzii DSM 13941 5541351 YP_001433903.1 CDS Rcas_3848 NC_009767.1 5029785 5030951 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mlo:mll7085 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase; mandelate racemase/muconate lactonizing protein 5029785..5030951 Roseiflexus castenholzii DSM 13941 5541352 YP_001433904.1 CDS Rcas_3849 NC_009767.1 5031008 5032270 D KEGG: rxy:Rxyl_1897 hypothetical protein; hypothetical protein 5031008..5032270 Roseiflexus castenholzii DSM 13941 5541353 YP_001433905.1 CDS Rcas_3850 NC_009767.1 5032273 5033691 D KEGG: sth:STH1938 hypothetical protein; hypothetical protein 5032273..5033691 Roseiflexus castenholzii DSM 13941 5541354 YP_001433906.1 CDS Rcas_3851 NC_009767.1 5033741 5034511 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rxy:Rxyl_0541 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5033741..5034511 Roseiflexus castenholzii DSM 13941 5541355 YP_001433907.1 CDS Rcas_3852 NC_009767.1 5035015 5035989 D PFAM: regulatory protein GntR HTH; KEGG: rrs:RoseRS_1355 regulatory protein GntR, HTH; GntR family transcriptional regulator 5035015..5035989 Roseiflexus castenholzii DSM 13941 5541356 YP_001433908.1 CDS Rcas_3853 NC_009767.1 5036152 5037531 D KEGG: sth:STH1938 hypothetical protein; hypothetical protein 5036152..5037531 Roseiflexus castenholzii DSM 13941 5541357 YP_001433909.1 CDS Rcas_3854 NC_009767.1 5037528 5038532 D PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: atc:AGR_L_249 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 5037528..5038532 Roseiflexus castenholzii DSM 13941 5541358 YP_001433910.1 CDS Rcas_3855 NC_009767.1 5038548 5039660 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: csc:Csac_2739 mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; mandelate racemase/muconate lactonizing protein 5038548..5039660 Roseiflexus castenholzii DSM 13941 5541359 YP_001433911.1 CDS Rcas_3856 NC_009767.1 5040112 5040636 D KEGG: rrs:RoseRS_1919 hypothetical protein; hypothetical protein 5040112..5040636 Roseiflexus castenholzii DSM 13941 5541360 YP_001433912.1 CDS Rcas_3857 NC_009767.1 5040640 5041590 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_1936 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(5040640..5041590) Roseiflexus castenholzii DSM 13941 5541361 YP_001433913.1 CDS Rcas_3858 NC_009767.1 5041587 5042660 R PFAM: Sulfate transporter/antisigma-factor antagonist STAS; histidine kinase HAMP region domain protein; KEGG: rrs:RoseRS_1935 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(5041587..5042660) Roseiflexus castenholzii DSM 13941 5541362 YP_001433914.1 CDS Rcas_3859 NC_009767.1 5042689 5043765 D PFAM: transposase IS4 family protein; KEGG: pna:Pnap_4408 transposase, IS4 family protein; transposase IS4 family protein 5042689..5043765 Roseiflexus castenholzii DSM 13941 5541363 YP_001433915.1 CDS Rcas_3861 NC_009767.1 5044427 5045839 D PFAM: FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1934 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5044427..5045839 Roseiflexus castenholzii DSM 13941 5541365 YP_001433916.1 CDS Rcas_3862 NC_009767.1 5046414 5047814 R PFAM: NERD domain protein; KEGG: rrs:RoseRS_1932 hypothetical protein; NERD domain-containing protein complement(5046414..5047814) Roseiflexus castenholzii DSM 13941 5541366 YP_001433917.1 CDS Rcas_3863 NC_009767.1 5048026 5049651 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1931 alpha amylase, catalytic region; alpha amylase complement(5048026..5049651) Roseiflexus castenholzii DSM 13941 5541367 YP_001433918.1 CDS Rcas_3864 NC_009767.1 5050359 5052335 D KEGG: rrs:RoseRS_3306 hypothetical protein; hypothetical protein 5050359..5052335 Roseiflexus castenholzii DSM 13941 5541368 YP_001433919.1 CDS Rcas_3865 NC_009767.1 5052569 5055151 R KEGG: rrs:RoseRS_4300 hypothetical protein; hypothetical protein complement(5052569..5055151) Roseiflexus castenholzii DSM 13941 5541369 YP_001433920.1 CDS Rcas_3866 NC_009767.1 5055295 5055459 D KEGG: rrs:RoseRS_4299 hypothetical protein; hypothetical protein 5055295..5055459 Roseiflexus castenholzii DSM 13941 5541370 YP_001433921.1 CDS Rcas_3867 NC_009767.1 5056079 5057131 D PFAM: protein of unknown function DUF820; KEGG: rrs:RoseRS_2797 protein of unknown function DUF820; hypothetical protein 5056079..5057131 Roseiflexus castenholzii DSM 13941 5541371 YP_001433922.1 CDS Rcas_3868 NC_009767.1 5057442 5058293 D PFAM: photosystem I assembly BtpA; KEGG: rrs:RoseRS_0541 photosystem I assembly BtpA; photosystem I assembly BtpA 5057442..5058293 Roseiflexus castenholzii DSM 13941 5541372 YP_001433923.1 CDS Rcas_3869 NC_009767.1 5058344 5059072 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_0542 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5058344..5059072 Roseiflexus castenholzii DSM 13941 5541373 YP_001433924.1 CDS Rcas_3870 NC_009767.1 5059227 5059703 R TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: rrs:RoseRS_0543 molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein C complement(5059227..5059703) Roseiflexus castenholzii DSM 13941 5541374 YP_001433925.1 CDS Rcas_3871 NC_009767.1 5060091 5062253 D KEGG: rrs:RoseRS_0544 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 5060091..5062253 Roseiflexus castenholzii DSM 13941 5541376 YP_001433926.1 CDS Rcas_3872 NC_009767.1 5062250 5064472 D MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 5062250..5064472 Roseiflexus castenholzii DSM 13941 5541377 YP_001433927.1 CDS Rcas_3873 NC_009767.1 5064469 5065611 D functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 5064469..5065611 Roseiflexus castenholzii DSM 13941 5541378 YP_001433928.1 CDS Rcas_3874 NC_009767.1 5066293 5067045 D PFAM: iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_0550 FeoA family protein; DtxR family iron dependent repressor 5066293..5067045 Roseiflexus castenholzii DSM 13941 5541379 YP_001433929.1 CDS Rcas_3875 NC_009767.1 5067112 5068611 D KEGG: rrs:RoseRS_0167 nuclease (RecB family)-like protein; recombinase B 5067112..5068611 Roseiflexus castenholzii DSM 13941 5541380 YP_001433930.1 CDS Rcas_3876 NC_009767.1 5068544 5069011 R KEGG: rrs:RoseRS_0166 hypothetical protein; hypothetical protein complement(5068544..5069011) Roseiflexus castenholzii DSM 13941 5541381 YP_001433931.1 CDS Rcas_3877 NC_009767.1 5069015 5069368 R KEGG: rrs:RoseRS_0165 hypothetical protein; hypothetical protein complement(5069015..5069368) Roseiflexus castenholzii DSM 13941 5541382 YP_001433932.1 CDS Rcas_3878 NC_009767.1 5070127 5073753 D TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; Vitamin B12 dependent methionine synthase activation region; cobalamin B12-binding domain protein; KEGG: rrs:RoseRS_0064 methionine synthase; methionine synthase 5070127..5073753 Roseiflexus castenholzii DSM 13941 5541384 YP_001433933.1 CDS Rcas_3879 NC_009767.1 5073843 5075018 D PFAM: class II aldolase/adducin family protein; KEGG: rrs:RoseRS_0002 class II aldolase/adducin family protein; class II aldolase/adducin family protein 5073843..5075018 Roseiflexus castenholzii DSM 13941 5541385 YP_001433934.1 CDS Rcas_3880 NC_009767.1 5075134 5075844 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rrs:RoseRS_0003 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5075134..5075844 Roseiflexus castenholzii DSM 13941 5541386 YP_001433935.1 CDS Rcas_3881 NC_009767.1 5076139 5076996 R KEGG: rrs:RoseRS_0004 hypothetical protein; hypothetical protein complement(5076139..5076996) Roseiflexus castenholzii DSM 13941 5541387 YP_001433936.1 CDS Rcas_3882 NC_009767.1 5077209 5078519 D KEGG: rrs:RoseRS_0857 hypothetical protein; hypothetical protein 5077209..5078519 Roseiflexus castenholzii DSM 13941 5541388 YP_001433937.1 CDS Rcas_3883 NC_009767.1 5078461 5081109 R KEGG: rrs:RoseRS_0856 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase complement(5078461..5081109) Roseiflexus castenholzii DSM 13941 5541389 YP_001433938.1 CDS Rcas_3884 NC_009767.1 5081313 5082392 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0855 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5081313..5082392) Roseiflexus castenholzii DSM 13941 5541390 YP_001433939.1 CDS Rcas_3885 NC_009767.1 5082544 5084841 D KEGG: rrs:RoseRS_0854 hypothetical protein; hypothetical protein 5082544..5084841 Roseiflexus castenholzii DSM 13941 5541391 YP_001433940.1 CDS Rcas_3886 NC_009767.1 5085330 5087090 D KEGG: rrs:RoseRS_0853 membrane protein-like protein; hypothetical protein 5085330..5087090 Roseiflexus castenholzii DSM 13941 5541392 YP_001433941.1 CDS Rcas_3887 NC_009767.1 5087102 5089372 D KEGG: rrs:RoseRS_0852 hypothetical protein; hypothetical protein 5087102..5089372 Roseiflexus castenholzii DSM 13941 5541393 YP_001433942.1 CDS Rcas_3888 NC_009767.1 5089447 5091633 D KEGG: rrs:RoseRS_0850 hypothetical protein; hypothetical protein 5089447..5091633 Roseiflexus castenholzii DSM 13941 5541394 YP_001433943.1 CDS Rcas_3889 NC_009767.1 5091633 5092478 D PFAM: RNA methylase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0849 methyltransferase type 11; type 11 methyltransferase 5091633..5092478 Roseiflexus castenholzii DSM 13941 5541395 YP_001433944.1 CDS Rcas_3890 NC_009767.1 5092479 5094143 D KEGG: rrs:RoseRS_0848 hypothetical protein; hypothetical protein 5092479..5094143 Roseiflexus castenholzii DSM 13941 5541396 YP_001433945.1 CDS Rcas_3891 NC_009767.1 5094209 5095342 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0847 glycosyl transferase, group 1; group 1 glycosyl transferase 5094209..5095342 Roseiflexus castenholzii DSM 13941 5541397 YP_001433946.1 CDS Rcas_3892 NC_009767.1 5095727 5096953 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0846 glycosyl transferase, group 1; group 1 glycosyl transferase 5095727..5096953 Roseiflexus castenholzii DSM 13941 5541398 YP_001433947.1 CDS Rcas_3893 NC_009767.1 5097377 5097949 D KEGG: rrs:RoseRS_0845 hypothetical protein; hypothetical protein 5097377..5097949 Roseiflexus castenholzii DSM 13941 5541399 YP_001433948.1 CDS Rcas_3894 NC_009767.1 5098013 5099143 D PFAM: permease; KEGG: rrs:RoseRS_0592 permease; permease 5098013..5099143 Roseiflexus castenholzii DSM 13941 5541400 YP_001433949.1 CDS Rcas_3895 NC_009767.1 5099258 5099734 R PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_0593 ferric uptake regulator, Fur family; ferric uptake regulator family protein complement(5099258..5099734) Roseiflexus castenholzii DSM 13941 5541401 YP_001433950.1 CDS Rcas_3896 NC_009767.1 5099931 5100350 D KEGG: rrs:RoseRS_0594 hypothetical protein; hypothetical protein 5099931..5100350 Roseiflexus castenholzii DSM 13941 5541402 YP_001433951.1 CDS Rcas_3897 NC_009767.1 5100464 5101147 D PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rrs:RoseRS_0595 transcriptional regulator, Crp/Fnr family; Crp/FNR family transcriptional regulator 5100464..5101147 Roseiflexus castenholzii DSM 13941 5541403 YP_001433952.1 CDS Rcas_3898 NC_009767.1 5101620 5103023 D KEGG: rrs:RoseRS_0596 hypothetical protein; hypothetical protein 5101620..5103023 Roseiflexus castenholzii DSM 13941 5541404 YP_001433953.1 CDS Rcas_3899 NC_009767.1 5103027 5104226 D KEGG: rrs:RoseRS_0597 hypothetical protein; hypothetical protein 5103027..5104226 Roseiflexus castenholzii DSM 13941 5541405 YP_001433954.1 CDS Rcas_3900 NC_009767.1 5105465 5106034 D KEGG: rrs:RoseRS_0598 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 5105465..5106034 Roseiflexus castenholzii DSM 13941 5541406 YP_001433955.1 CDS Rcas_3901 NC_009767.1 5106352 5106858 D PFAM: ferric-uptake regulator; KEGG: nca:Noca_1934 ferric-uptake regulator; ferric uptake regulator family protein 5106352..5106858 Roseiflexus castenholzii DSM 13941 5541407 YP_001433956.1 CDS Rcas_3902 NC_009767.1 5106874 5107197 R KEGG: mfa:Mfla_2613 hypothetical protein; hypothetical protein complement(5106874..5107197) Roseiflexus castenholzii DSM 13941 5541408 YP_001433957.1 CDS Rcas_3903 NC_009767.1 5107308 5107574 R binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 complement(5107308..5107574) Roseiflexus castenholzii DSM 13941 5541409 YP_001433958.1 CDS Rcas_3904 NC_009767.1 5107571 5107846 R PFAM: ribosomal protein L28; KEGG: rrs:RoseRS_0601 ribosomal protein L28; 50S ribosomal protein L28 complement(5107571..5107846) Roseiflexus castenholzii DSM 13941 5541410 YP_001433959.1 CDS Rcas_3905 NC_009767.1 5107874 5108107 R KEGG: rrs:RoseRS_0602 hypothetical protein; hypothetical protein complement(5107874..5108107) Roseiflexus castenholzii DSM 13941 5541411 YP_001433960.1 CDS Rcas_3907 NC_009767.1 5109580 5110011 D KEGG: rrs:RoseRS_1353 hypothetical protein; hypothetical protein 5109580..5110011 Roseiflexus castenholzii DSM 13941 5541413 YP_001433961.1 CDS Rcas_3908 NC_009767.1 5110021 5110839 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: rrs:RoseRS_1352 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5110021..5110839 Roseiflexus castenholzii DSM 13941 5541414 YP_001433962.1 CDS Rcas_3909 NC_009767.1 5110820 5111800 D PFAM: ornithine cyclodeaminase/mu-crystallin; Shikimate/quinate 5-dehydrogenase; KEGG: rrs:RoseRS_1351 ornithine cyclodeaminase; ornithine cyclodeaminase 5110820..5111800 Roseiflexus castenholzii DSM 13941 5541415 YP_001433963.1 CDS Rcas_3910 NC_009767.1 5111970 5112473 R PFAM: cyclic nucleotide-binding; KEGG: rrs:RoseRS_3727 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein complement(5111970..5112473) Roseiflexus castenholzii DSM 13941 5541416 YP_001433964.1 CDS Rcas_3911 NC_009767.1 5112576 5113160 D KEGG: rrs:RoseRS_3726 hypothetical protein; hypothetical protein 5112576..5113160 Roseiflexus castenholzii DSM 13941 5541417 YP_001433965.1 CDS Rcas_3912 NC_009767.1 5113403 5114011 R KEGG: rrs:RoseRS_3725 hypothetical protein; hypothetical protein complement(5113403..5114011) Roseiflexus castenholzii DSM 13941 5541418 YP_001433966.1 CDS Rcas_3913 NC_009767.1 5114141 5115010 R KEGG: rrs:RoseRS_3724 hypothetical protein; hypothetical protein complement(5114141..5115010) Roseiflexus castenholzii DSM 13941 5541419 YP_001433967.1 CDS Rcas_3914 NC_009767.1 5115252 5116085 R Converts D-mannonate to D-mannuronate; D-mannonate oxidoreductase complement(5115252..5116085) Roseiflexus castenholzii DSM 13941 5541420 YP_001433968.1 CDS Rcas_3915 NC_009767.1 5116383 5118371 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_3722 alpha amylase, catalytic region; alpha amylase 5116383..5118371 Roseiflexus castenholzii DSM 13941 5541421 YP_001433969.1 CDS Rcas_3916 NC_009767.1 5118572 5118958 D KEGG: rrs:RoseRS_3721 hypothetical protein; hypothetical protein 5118572..5118958 Roseiflexus castenholzii DSM 13941 5541422 YP_001433970.1 CDS Rcas_3917 NC_009767.1 5119110 5119802 R KEGG: rrs:RoseRS_1449 hypothetical protein; hypothetical protein complement(5119110..5119802) Roseiflexus castenholzii DSM 13941 5541423 YP_001433971.1 CDS Rcas_3919 NC_009767.1 5120181 5120579 R KEGG: rrs:RoseRS_2588 hypothetical protein; hypothetical protein complement(5120181..5120579) Roseiflexus castenholzii DSM 13941 5541425 YP_001433972.1 CDS Rcas_3920 NC_009767.1 5120609 5120893 R KEGG: rrs:RoseRS_2590 hypothetical protein; hypothetical protein complement(5120609..5120893) Roseiflexus castenholzii DSM 13941 5541426 YP_001433973.1 CDS Rcas_3921 NC_009767.1 5120890 5121273 R PFAM: HEPN domain protein; KEGG: rrs:RoseRS_1451 HEPN domain protein; HEPN domain-containing protein complement(5120890..5121273) Roseiflexus castenholzii DSM 13941 5541427 YP_001433974.1 CDS Rcas_3922 NC_009767.1 5121260 5121613 R PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_1450 DNA polymerase, beta domain protein region; DNA polymerase subunit beta complement(5121260..5121613) Roseiflexus castenholzii DSM 13941 5541428 YP_001433975.1 CDS Rcas_3923 NC_009767.1 5121750 5122259 R KEGG: rrs:RoseRS_2591 protein of unknown function DUF324; hypothetical protein complement(5121750..5122259) Roseiflexus castenholzii DSM 13941 5541429 YP_001433976.1 CDS rpsB NC_009767.1 5123520 5124311 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 5123520..5124311 Roseiflexus castenholzii DSM 13941 5541431 YP_001433977.1 CDS Rcas_3926 NC_009767.1 5124401 5124931 D TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; Translation elongation factor EFTs/EF1B dimerisation; KEGG: rrs:RoseRS_2018 translation elongation factor Ts; translation elongation factor Ts 5124401..5124931 Roseiflexus castenholzii DSM 13941 5541432 YP_001433978.1 CDS pyrH NC_009767.1 5125170 5125901 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 5125170..5125901 Roseiflexus castenholzii DSM 13941 5541433 YP_001433979.1 CDS frr NC_009767.1 5125922 5126479 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 5125922..5126479 Roseiflexus castenholzii DSM 13941 5541434 YP_001433980.1 CDS Rcas_3929 NC_009767.1 5126602 5127312 D KEGG: rrs:RoseRS_2015 UDP diphosphate synthase; TIGRFAM: UDP diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase 5126602..5127312 Roseiflexus castenholzii DSM 13941 5541435 YP_001433981.1 CDS Rcas_3930 NC_009767.1 5127317 5128165 D PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_2014 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 5127317..5128165 Roseiflexus castenholzii DSM 13941 5541436 YP_001433982.1 CDS Rcas_3931 NC_009767.1 5128266 5129984 D TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rrs:RoseRS_2008 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 5128266..5129984 Roseiflexus castenholzii DSM 13941 5541437 YP_001433983.1 CDS Rcas_3932 NC_009767.1 5129997 5131868 D PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase KEGG: rrs:RoseRS_2007 CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; hypothetical protein 5129997..5131868 Roseiflexus castenholzii DSM 13941 5541438 YP_001433984.1 CDS Rcas_3933 NC_009767.1 5131878 5132576 D KEGG: rrs:RoseRS_2006 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 5131878..5132576 Roseiflexus castenholzii DSM 13941 5541439 YP_001433985.1 CDS Rcas_3934 NC_009767.1 5132793 5134712 D TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2004 acetate--CoA ligase; acetate--CoA ligase 5132793..5134712 Roseiflexus castenholzii DSM 13941 5541440 YP_001433986.1 CDS Rcas_3935 NC_009767.1 5134760 5136712 D TIGRFAM: acetate--CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_2003 acetate--CoA ligase; acetate--CoA ligase 5134760..5136712 Roseiflexus castenholzii DSM 13941 5541441 YP_001433987.1 CDS Rcas_3936 NC_009767.1 5136757 5137305 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_2002 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5136757..5137305) Roseiflexus castenholzii DSM 13941 5541442 YP_001433988.1 CDS Rcas_3937 NC_009767.1 5137386 5138171 D KEGG: rrs:RoseRS_2001 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; ribonuclease PH 5137386..5138171 Roseiflexus castenholzii DSM 13941 5541443 YP_001433989.1 CDS Rcas_3938 NC_009767.1 5138222 5140036 R KEGG: rrs:RoseRS_1096 hypothetical protein; hypothetical protein complement(5138222..5140036) Roseiflexus castenholzii DSM 13941 5541444 YP_001433990.1 CDS Rcas_3939 NC_009767.1 5140937 5146210 R PFAM: alpha-2-macroglobulin domain protein; KEGG: rrs:RoseRS_1097 large extracellular alpha-helical protein-like protein; alpha-2-macroglobulin domain-containing protein complement(5140937..5146210) Roseiflexus castenholzii DSM 13941 5541445 YP_001433991.1 CDS Rcas_3940 NC_009767.1 5146292 5147500 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1098 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5146292..5147500) Roseiflexus castenholzii DSM 13941 5541446 YP_001433992.1 CDS Rcas_3941 NC_009767.1 5147502 5148215 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1103 methyltransferase type 11; type 11 methyltransferase complement(5147502..5148215) Roseiflexus castenholzii DSM 13941 5541447 YP_001433993.1 CDS Rcas_3942 NC_009767.1 5148229 5149416 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_1104 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5148229..5149416) Roseiflexus castenholzii DSM 13941 5541448 YP_001433994.1 CDS Rcas_3943 NC_009767.1 5149413 5151518 R KEGG: rrs:RoseRS_1105 hypothetical protein; hypothetical protein complement(5149413..5151518) Roseiflexus castenholzii DSM 13941 5541449 YP_001433995.1 CDS Rcas_3944 NC_009767.1 5151540 5152076 R PFAM: Dual specificity protein phosphatase; KEGG: rrs:RoseRS_1106 dual specificity protein phosphatase; dual specificity protein phosphatase complement(5151540..5152076) Roseiflexus castenholzii DSM 13941 5541450 YP_001433996.1 CDS Rcas_3945 NC_009767.1 5152230 5152508 D PFAM: regulatory protein AsnC/Lrp family; KEGG: rrs:RoseRS_1107 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 5152230..5152508 Roseiflexus castenholzii DSM 13941 5541451 YP_001433997.1 CDS Rcas_3946 NC_009767.1 5152521 5152895 D KEGG: rrs:RoseRS_1108 hypothetical protein; hypothetical protein 5152521..5152895 Roseiflexus castenholzii DSM 13941 5541452 YP_001433998.1 CDS Rcas_3947 NC_009767.1 5152921 5153529 R KEGG: rrs:RoseRS_1109 hypothetical protein; hypothetical protein complement(5152921..5153529) Roseiflexus castenholzii DSM 13941 5541453 YP_001433999.1 CDS Rcas_3948 NC_009767.1 5153558 5154046 D PFAM: protein of unknown function DUF355; KEGG: rrs:RoseRS_1110 protein of unknown function DUF355; hypothetical protein 5153558..5154046 Roseiflexus castenholzii DSM 13941 5541454 YP_001434000.1 CDS Rcas_3949 NC_009767.1 5154091 5155542 D TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: rrs:RoseRS_1111 glutamyl-tRNA(Gln) amidotransferase, B subunit; glutamyl-tRNA(Gln) amidotransferase subunit B 5154091..5155542 Roseiflexus castenholzii DSM 13941 5541455 YP_001434001.1 CDS Rcas_3950 NC_009767.1 5155646 5156839 D PFAM: esterase; KEGG: rrs:RoseRS_1112 esterase; esterase 5155646..5156839 Roseiflexus castenholzii DSM 13941 5541456 YP_001434002.1 CDS Rcas_3951 NC_009767.1 5156854 5157756 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1113 ABC transporter related; ABC transporter-like protein 5156854..5157756 Roseiflexus castenholzii DSM 13941 5541457 YP_001434003.1 CDS Rcas_3952 NC_009767.1 5157756 5158628 D KEGG: rrs:RoseRS_1114 hypothetical protein; hypothetical protein 5157756..5158628 Roseiflexus castenholzii DSM 13941 5541458 YP_001434004.1 CDS Rcas_3953 NC_009767.1 5158641 5159486 R KEGG: rrs:RoseRS_1115 hypothetical protein; hypothetical protein complement(5158641..5159486) Roseiflexus castenholzii DSM 13941 5541459 YP_001434005.1 CDS Rcas_3954 NC_009767.1 5159493 5160596 R TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: rrs:RoseRS_1116 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter complement(5159493..5160596) Roseiflexus castenholzii DSM 13941 5541460 YP_001434006.1 CDS Rcas_3955 NC_009767.1 5160730 5162091 D PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_1117 signal transduction histidine kinase; signal transduction histidine kinase 5160730..5162091 Roseiflexus castenholzii DSM 13941 5541461 YP_001434007.1 CDS Rcas_3956 NC_009767.1 5162136 5163848 D PFAM: penicillin-binding protein transpeptidase; KEGG: rrs:RoseRS_1118 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 5162136..5163848 Roseiflexus castenholzii DSM 13941 5541462 YP_001434008.1 CDS Rcas_3957 NC_009767.1 5163901 5165274 D PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: rrs:RoseRS_1119 peptidase S41; peptidase S41 5163901..5165274 Roseiflexus castenholzii DSM 13941 5541463 YP_001434009.1 CDS hisB NC_009767.1 5165274 5165864 D catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 5165274..5165864 Roseiflexus castenholzii DSM 13941 5541464 YP_001434010.1 CDS Rcas_3959 NC_009767.1 5165861 5166889 D PFAM: luciferase family protein; KEGG: rrs:RoseRS_1121 luciferase family protein; luciferase family protein 5165861..5166889 Roseiflexus castenholzii DSM 13941 5541465 YP_001434011.1 CDS Rcas_3960 NC_009767.1 5166899 5167213 D PFAM: DNA polymerase beta domain protein region; KEGG: gme:Gmet_0479 DNA polymerase, beta-like region; DNA polymerase subunit beta 5166899..5167213 Roseiflexus castenholzii DSM 13941 5541466 YP_001434012.1 CDS Rcas_3961 NC_009767.1 5167200 5167541 D PFAM: protein of unknown function DUF86; KEGG: syf:Synpcc7942_0032 hypothetical protein; hypothetical protein 5167200..5167541 Roseiflexus castenholzii DSM 13941 5541467 YP_001434013.1 CDS Rcas_3962 NC_009767.1 5167561 5168766 D KEGG: rrs:RoseRS_1122 laminin G; laminin G 5167561..5168766 Roseiflexus castenholzii DSM 13941 5541468 YP_001434014.1 CDS Rcas_3963 NC_009767.1 5168856 5169785 D KEGG: rrs:RoseRS_1123 LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 5168856..5169785 Roseiflexus castenholzii DSM 13941 5541469 YP_001434015.1 CDS Rcas_3964 NC_009767.1 5169785 5170879 D KEGG: rrs:RoseRS_1124 LamG domain protein jellyroll fold domain protein; LamG domain-containing protein 5169785..5170879 Roseiflexus castenholzii DSM 13941 5541470 YP_001434016.1 CDS Rcas_3965 NC_009767.1 5171089 5171412 D KEGG: rrs:RoseRS_1125 hypothetical protein; hypothetical protein 5171089..5171412 Roseiflexus castenholzii DSM 13941 5541471 YP_001434017.1 CDS Rcas_3966 NC_009767.1 5171424 5172131 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_1126 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 5171424..5172131 Roseiflexus castenholzii DSM 13941 5541472 YP_001434018.1 CDS Rcas_3967 NC_009767.1 5172161 5173504 D PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_1127 AMP-dependent synthetase and ligase; AMP-dependent synthetase/ligase 5172161..5173504 Roseiflexus castenholzii DSM 13941 5541473 YP_001434019.1 CDS Rcas_3968 NC_009767.1 5173506 5175011 D KEGG: rrs:RoseRS_1128 hypothetical protein; hypothetical protein 5173506..5175011 Roseiflexus castenholzii DSM 13941 5541474 YP_001434020.1 CDS Rcas_3969 NC_009767.1 5175011 5176030 D PFAM: transferase hexapeptide repeat containing protein; KEGG: rrs:RoseRS_1129 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 5175011..5176030 Roseiflexus castenholzii DSM 13941 5541475 YP_001434021.1 CDS Rcas_3970 NC_009767.1 5176182 5176940 D PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_1130 glycosyl transferase, family 2; glycosyl transferase family protein 5176182..5176940 Roseiflexus castenholzii DSM 13941 5541476 YP_001434022.1 CDS Rcas_3971 NC_009767.1 5176937 5178022 D PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_1131 UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 5176937..5178022 Roseiflexus castenholzii DSM 13941 5541477 YP_001434023.1 CDS Rcas_3972 NC_009767.1 5178263 5178640 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rrs:RoseRS_1132 protein of unknown function DUF6, transmembrane; hypothetical protein 5178263..5178640 Roseiflexus castenholzii DSM 13941 5541478 YP_001434024.1 CDS Rcas_3973 NC_009767.1 5178822 5180174 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_1133 FAD dependent oxidoreductase; hypothetical protein 5178822..5180174 Roseiflexus castenholzii DSM 13941 5541479 YP_001434025.1 CDS Rcas_3974 NC_009767.1 5180220 5181686 D PFAM: sugar transferase; KEGG: rrs:RoseRS_1134 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 5180220..5181686 Roseiflexus castenholzii DSM 13941 5541480 YP_001434026.1 CDS Rcas_3975 NC_009767.1 5181702 5182787 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rrs:RoseRS_1135 oxidoreductase domain protein; oxidoreductase domain-containing protein 5181702..5182787 Roseiflexus castenholzii DSM 13941 5541481 YP_001434027.1 CDS Rcas_3976 NC_009767.1 5182827 5183117 D hypothetical protein 5182827..5183117 Roseiflexus castenholzii DSM 13941 5541482 YP_001434028.1 CDS Rcas_3977 NC_009767.1 5188712 5189467 D TIGRFAM: F420-dependent oxidoreductase, PFAM: protein of unknown function DUF129; KEGG: rrs:RoseRS_1136 F420-dependent oxidoreductase; F420-dependent oxidoreductase 5188712..5189467 Roseiflexus castenholzii DSM 13941 5541487 YP_001434029.1 CDS Rcas_3978 NC_009767.1 5189505 5190134 D PFAM: nitroreductase; KEGG: rrs:RoseRS_1137 nitroreductase; nitroreductase 5189505..5190134 Roseiflexus castenholzii DSM 13941 5541488 YP_001434030.1 CDS Rcas_3979 NC_009767.1 5190153 5191097 D catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); LPPG:FO 2-phospho-L-lactate transferase 5190153..5191097 Roseiflexus castenholzii DSM 13941 5541489 YP_001434031.1 CDS Rcas_3980 NC_009767.1 5191344 5191976 D PFAM: protein of unknown function DUF121; KEGG: rrs:RoseRS_1139 protein of unknown function DUF121; hypothetical protein 5191344..5191976 Roseiflexus castenholzii DSM 13941 5541490 YP_001434032.1 CDS Rcas_3981 NC_009767.1 5191970 5192959 D PFAM: luciferase family protein; KEGG: rrs:RoseRS_1140 luciferase family protein; luciferase family protein 5191970..5192959 Roseiflexus castenholzii DSM 13941 5541491 YP_001434033.1 CDS Rcas_3982 NC_009767.1 5192971 5193387 D PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: rrs:RoseRS_1141 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 5192971..5193387 Roseiflexus castenholzii DSM 13941 5541492 YP_001434034.1 CDS Rcas_3983 NC_009767.1 5193882 5196200 R PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rrs:RoseRS_1142 xanthine dehydrogenase; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(5193882..5196200) Roseiflexus castenholzii DSM 13941 5541493 YP_001434035.1 CDS Rcas_3984 NC_009767.1 5196213 5196509 R TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: rrs:RoseRS_1143 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C complement(5196213..5196509) Roseiflexus castenholzii DSM 13941 5541494 YP_001434036.1 CDS Rcas_3985 NC_009767.1 5196530 5197885 R PFAM: YbbR family protein; KEGG: rrs:RoseRS_1144 YbbR family protein; YbbR family protein complement(5196530..5197885) Roseiflexus castenholzii DSM 13941 5541495 YP_001434037.1 CDS Rcas_3986 NC_009767.1 5197904 5198788 R PFAM: protein of unknown function DUF147; KEGG: rrs:RoseRS_1145 protein of unknown function DUF147; hypothetical protein complement(5197904..5198788) Roseiflexus castenholzii DSM 13941 5541496 YP_001434038.1 CDS Rcas_3987 NC_009767.1 5198892 5202170 R PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_1146 tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(5198892..5202170) Roseiflexus castenholzii DSM 13941 5541497 YP_001434039.1 CDS Rcas_3988 NC_009767.1 5202317 5203108 R PFAM: IstB domain protein ATP-binding protein; Chromosomal replication initiator DnaA; SMART: AAA ATPase; KEGG: rrs:RoseRS_1147 IstB domain protein ATP-binding protein; IstB ATP binding domain-containing protein complement(5202317..5203108) Roseiflexus castenholzii DSM 13941 5541498 YP_001434040.1 CDS Rcas_3989 NC_009767.1 5203035 5203754 R TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region; KEGG: rrs:RoseRS_1148 primosome, DnaD subunit; primosome subunit DnaD complement(5203035..5203754) Roseiflexus castenholzii DSM 13941 5541499 YP_001434041.1 CDS Rcas_3990 NC_009767.1 5204025 5205359 R KEGG: rrs:RoseRS_1149 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase complement(5204025..5205359) Roseiflexus castenholzii DSM 13941 5541500 YP_001434042.1 CDS rplI NC_009767.1 5205569 5206066 R in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 complement(5205569..5206066) Roseiflexus castenholzii DSM 13941 5541501 YP_001434043.1 CDS Rcas_3992 NC_009767.1 5206185 5206847 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_1151 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase complement(5206185..5206847) Roseiflexus castenholzii DSM 13941 5541502 YP_001434044.1 CDS Rcas_3993 NC_009767.1 5206997 5207962 R PFAM: beta-lactamase domain protein; KEGG: rrs:RoseRS_1152 beta-lactamase domain protein; beta-lactamase domain-containing protein complement(5206997..5207962) Roseiflexus castenholzii DSM 13941 5541503 YP_001434045.1 CDS Rcas_3994 NC_009767.1 5208004 5208777 D PFAM: inositol monophosphatase; KEGG: rrs:RoseRS_1153 inositol-phosphate phosphatase; inositol monophosphatase 5208004..5208777 Roseiflexus castenholzii DSM 13941 5541504 YP_001434046.1 CDS Rcas_3995 NC_009767.1 5208921 5209319 R PFAM: ribosomal protein S9; KEGG: rrs:RoseRS_1154 ribosomal protein S9; 30S ribosomal protein S9 complement(5208921..5209319) Roseiflexus castenholzii DSM 13941 5541505 YP_001434047.1 CDS rplM NC_009767.1 5209340 5209780 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(5209340..5209780) Roseiflexus castenholzii DSM 13941 5541506 YP_001434048.1 CDS Rcas_3997 NC_009767.1 5209777 5210589 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase ACD complement(5209777..5210589) Roseiflexus castenholzii DSM 13941 5541507 YP_001434049.1 CDS rplQ NC_009767.1 5210589 5210939 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(5210589..5210939) Roseiflexus castenholzii DSM 13941 5541508 YP_001434050.1 CDS Rcas_3999 NC_009767.1 5210954 5211925 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(5210954..5211925) Roseiflexus castenholzii DSM 13941 5541509 YP_001434051.1 CDS Rcas_4000 NC_009767.1 5212020 5212640 R PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: rrs:RoseRS_1159 ribosomal protein S4; 30S ribosomal protein S4 complement(5212020..5212640) Roseiflexus castenholzii DSM 13941 5541510 YP_001434052.1 CDS Rcas_4001 NC_009767.1 5212661 5213077 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(5212661..5213077) Roseiflexus castenholzii DSM 13941 5541511 YP_001434053.1 CDS rpsM NC_009767.1 5213143 5213526 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(5213143..5213526) Roseiflexus castenholzii DSM 13941 5541512 YP_001434054.1 CDS rpmJ NC_009767.1 5213618 5213734 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(5213618..5213734) Roseiflexus castenholzii DSM 13941 5541513 YP_001434055.1 CDS infA NC_009767.1 5213843 5214064 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(5213843..5214064) Roseiflexus castenholzii DSM 13941 5541514 YP_001434056.1 CDS Rcas_4005 NC_009767.1 5214081 5214761 R PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: rrs:RoseRS_1164 nucleoside-triphosphate--adenylate kinase; nucleoside-triphosphate--adenylate kinase complement(5214081..5214761) Roseiflexus castenholzii DSM 13941 5541515 YP_001434057.1 CDS Rcas_4006 NC_009767.1 5214797 5216149 R TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: rrs:RoseRS_1165 preprotein translocase, SecY subunit; preprotein translocase subunit SecY complement(5214797..5216149) Roseiflexus castenholzii DSM 13941 5541516 YP_001434058.1 CDS rplO NC_009767.1 5216196 5216720 R late assembly protein; 50S ribosomal protein L15 complement(5216196..5216720) Roseiflexus castenholzii DSM 13941 5541517 YP_001434059.1 CDS rpmD NC_009767.1 5216786 5217013 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(5216786..5217013) Roseiflexus castenholzii DSM 13941 5541518 YP_001434060.1 CDS rpsE NC_009767.1 5217017 5217559 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(5217017..5217559) Roseiflexus castenholzii DSM 13941 5541519 YP_001434061.1 CDS rplR NC_009767.1 5217658 5218023 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(5217658..5218023) Roseiflexus castenholzii DSM 13941 5541520 YP_001434062.1 CDS rplF NC_009767.1 5218095 5218658 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(5218095..5218658) Roseiflexus castenholzii DSM 13941 5541521 YP_001434063.1 CDS rpsH NC_009767.1 5218679 5219077 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(5218679..5219077) Roseiflexus castenholzii DSM 13941 5541522 YP_001434064.1 CDS rpsN NC_009767.1 5219132 5219317 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 complement(5219132..5219317) Roseiflexus castenholzii DSM 13941 5541523 YP_001434065.1 CDS rplE NC_009767.1 5219383 5219925 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(5219383..5219925) Roseiflexus castenholzii DSM 13941 5541524 YP_001434066.1 CDS rplX NC_009767.1 5219976 5220308 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(5219976..5220308) Roseiflexus castenholzii DSM 13941 5541525 YP_001434067.1 CDS rplN NC_009767.1 5220329 5220697 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(5220329..5220697) Roseiflexus castenholzii DSM 13941 5541526 YP_001434068.1 CDS rpsQ NC_009767.1 5220700 5220960 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(5220700..5220960) Roseiflexus castenholzii DSM 13941 5541527 YP_001434069.1 CDS Rcas_4018 NC_009767.1 5220972 5221172 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(5220972..5221172) Roseiflexus castenholzii DSM 13941 5541528 YP_001434070.1 CDS rplP NC_009767.1 5221169 5221594 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(5221169..5221594) Roseiflexus castenholzii DSM 13941 5541529 YP_001434071.1 CDS Rcas_4020 NC_009767.1 5221609 5222391 R KEGG: rrs:RoseRS_1179 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein; 30S ribosomal protein S3 complement(5221609..5222391) Roseiflexus castenholzii DSM 13941 5541530 YP_001434072.1 CDS rplV NC_009767.1 5222437 5222778 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(5222437..5222778) Roseiflexus castenholzii DSM 13941 5541531 YP_001434073.1 CDS rpsS NC_009767.1 5222811 5223098 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(5222811..5223098) Roseiflexus castenholzii DSM 13941 5541532 YP_001434074.1 CDS rplB NC_009767.1 5223123 5223950 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(5223123..5223950) Roseiflexus castenholzii DSM 13941 5541533 YP_001434075.1 CDS rplW NC_009767.1 5223954 5224238 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(5223954..5224238) Roseiflexus castenholzii DSM 13941 5541534 YP_001434076.1 CDS Rcas_4025 NC_009767.1 5224238 5224903 R PFAM: ribosomal protein L4/L1e; KEGG: rrs:RoseRS_1184 ribosomal protein L4/L1e; 50S ribosomal protein L4 complement(5224238..5224903) Roseiflexus castenholzii DSM 13941 5541535 YP_001434077.1 CDS rplC NC_009767.1 5224956 5225588 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(5224956..5225588) Roseiflexus castenholzii DSM 13941 5541536 YP_001434078.1 CDS rpsJ NC_009767.1 5225648 5225956 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(5225648..5225956) Roseiflexus castenholzii DSM 13941 5541537 YP_001434079.1 CDS Rcas_4028 NC_009767.1 5226052 5227257 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(5226052..5227257) Roseiflexus castenholzii DSM 13941 5541538 YP_001434080.1 CDS Rcas_4029 NC_009767.1 5227316 5229421 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(5227316..5229421) Roseiflexus castenholzii DSM 13941 5541539 YP_001434081.1 CDS Rcas_4030 NC_009767.1 5229517 5229990 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(5229517..5229990) Roseiflexus castenholzii DSM 13941 5541540 YP_001434082.1 CDS rpsL NC_009767.1 5230049 5230483 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(5230049..5230483) Roseiflexus castenholzii DSM 13941 5541541 YP_001434083.1 CDS Rcas_4032 NC_009767.1 5230790 5231704 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_1191 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5230790..5231704 Roseiflexus castenholzii DSM 13941 5541542 YP_001434084.1 CDS Rcas_4033 NC_009767.1 5231849 5232325 D KEGG: rrs:RoseRS_1192 hypothetical protein; hypothetical protein 5231849..5232325 Roseiflexus castenholzii DSM 13941 5541543 YP_001434085.1 CDS Rcas_4034 NC_009767.1 5235124 5235447 D hypothetical protein 5235124..5235447 Roseiflexus castenholzii DSM 13941 5541545 YP_001434086.1 CDS Rcas_4035 NC_009767.1 5235462 5236538 D KEGG: rrs:RoseRS_1193 hypothetical protein; hypothetical protein 5235462..5236538 Roseiflexus castenholzii DSM 13941 5541546 YP_001434087.1 CDS Rcas_4036 NC_009767.1 5236544 5237146 R KEGG: pas:Pars_2160 hypothetical protein; hypothetical protein complement(5236544..5237146) Roseiflexus castenholzii DSM 13941 5541547 YP_001434088.1 CDS Rcas_4037 NC_009767.1 5237197 5238051 R KEGG: ngo:NGO0874 type II DNA restriction endonuclease R.NGOI; type II site-specific deoxyribonuclease complement(5237197..5238051) Roseiflexus castenholzii DSM 13941 5541548 YP_001434089.1 CDS Rcas_4038 NC_009767.1 5238059 5239510 R PFAM: RNA methylase; KEGG: rrs:RoseRS_2251 hypothetical protein; RNA methylase complement(5238059..5239510) Roseiflexus castenholzii DSM 13941 5541549 YP_001434090.1 CDS Rcas_4039 NC_009767.1 5239745 5239957 R KEGG: rrs:RoseRS_1197 hypothetical protein; hypothetical protein complement(5239745..5239957) Roseiflexus castenholzii DSM 13941 5541550 YP_001434091.1 CDS Rcas_4040 NC_009767.1 5240325 5241752 R PFAM: oxidoreductase/nitrogenase component 1; KEGG: rrs:RoseRS_1198 nitrogenase; nitrogenase complement(5240325..5241752) Roseiflexus castenholzii DSM 13941 5541551 YP_001434092.1 CDS Rcas_4041 NC_009767.1 5241749 5243179 R KEGG: rrs:RoseRS_1199 nitrogenase component I, alpha chain; TIGRFAM: nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1; nitrogenase component I subunit alpha complement(5241749..5243179) Roseiflexus castenholzii DSM 13941 5541552 YP_001434093.1 CDS Rcas_4042 NC_009767.1 5243148 5244089 R PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_1200 radical SAM domain protein; radical SAM domain-containing protein complement(5243148..5244089) Roseiflexus castenholzii DSM 13941 5541553 YP_001434094.1 CDS Rcas_4043 NC_009767.1 5244117 5244938 R KEGG: rrs:RoseRS_1201 nitrogenase iron protein; TIGRFAM: nitrogenase iron protein; PFAM: NifH/frxC-family protein; nitrogenase iron protein complement(5244117..5244938) Roseiflexus castenholzii DSM 13941 5541554 YP_001434095.1 CDS Rcas_4044 NC_009767.1 5245820 5246725 D KEGG: rrs:RoseRS_1202 hypothetical protein; hypothetical protein 5245820..5246725 Roseiflexus castenholzii DSM 13941 5541555 YP_001434096.1 CDS Rcas_4045 NC_009767.1 5246738 5249644 D PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_1203 protein of unknown function DUF214; hypothetical protein 5246738..5249644 Roseiflexus castenholzii DSM 13941 5541556 YP_001434097.1 CDS Rcas_4046 NC_009767.1 5249730 5250293 D KEGG: ddi:DDBDRAFT_0187057 hypothetical protein; hypothetical protein 5249730..5250293 Roseiflexus castenholzii DSM 13941 5541557 YP_001434098.1 CDS Rcas_4047 NC_009767.1 5250349 5252997 D KEGG: rrs:RoseRS_1205 hypothetical protein; hypothetical protein 5250349..5252997 Roseiflexus castenholzii DSM 13941 5541558 YP_001434099.1 CDS Rcas_4048 NC_009767.1 5253533 5253904 D KEGG: rrs:RoseRS_1413 protein of unknown function DUF820; hypothetical protein 5253533..5253904 Roseiflexus castenholzii DSM 13941 5541559 YP_001434100.1 CDS Rcas_4049 NC_009767.1 5253999 5254508 R KEGG: rrs:RoseRS_2848 hypothetical protein; hypothetical protein complement(5253999..5254508) Roseiflexus castenholzii DSM 13941 5541560 YP_001434101.1 CDS Rcas_4050 NC_009767.1 5254696 5255523 D PFAM: cyclase family protein; KEGG: rrs:RoseRS_1211 cyclase family protein; cyclase family protein 5254696..5255523 Roseiflexus castenholzii DSM 13941 5541561 YP_001434102.1 CDS Rcas_4051 NC_009767.1 5255528 5255938 R KEGG: rrs:RoseRS_1212 hypothetical protein; hypothetical protein complement(5255528..5255938) Roseiflexus castenholzii DSM 13941 5541562 YP_001434103.1 CDS Rcas_4052 NC_009767.1 5256431 5260009 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rrs:RoseRS_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 5256431..5260009 Roseiflexus castenholzii DSM 13941 5541563 YP_001434104.1 CDS Rcas_4054 NC_009767.1 5260684 5261997 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_2242 major facilitator superfamily MFS_1; major facilitator transporter 5260684..5261997 Roseiflexus castenholzii DSM 13941 5541565 YP_001434105.1 CDS Rcas_4055 NC_009767.1 5262300 5263751 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rrs:RoseRS_2243 MATE efflux family protein; MATE efflux family protein 5262300..5263751 Roseiflexus castenholzii DSM 13941 5541566 YP_001434106.1 CDS Rcas_4056 NC_009767.1 5265333 5266073 D KEGG: rrs:RoseRS_2244 hypothetical protein; hypothetical protein 5265333..5266073 Roseiflexus castenholzii DSM 13941 5541567 YP_001434107.1 CDS Rcas_4057 NC_009767.1 5266468 5266797 D PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: rrs:RoseRS_2245 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS 5266468..5266797 Roseiflexus castenholzii DSM 13941 5541568 YP_001434108.1 CDS Rcas_4058 NC_009767.1 5266803 5267873 R KEGG: rrs:RoseRS_2246 virion core protein (lumpy skin disease virus)-like protein; virion core protein (lumpy skin disease virus)-like protein complement(5266803..5267873) Roseiflexus castenholzii DSM 13941 5541569 YP_001434109.1 CDS Rcas_4059 NC_009767.1 5268171 5268980 R PFAM: aspartate/glutamate/uridylate kinase; KEGG: rrs:RoseRS_2247 aspartate/glutamate/uridylate kinase; aspartate/glutamate/uridylate kinase complement(5268171..5268980) Roseiflexus castenholzii DSM 13941 5541570 YP_001434110.1 CDS Rcas_4060 NC_009767.1 5269613 5270596 R PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_2248 UbiA prenyltransferase; UbiA prenyltransferase complement(5269613..5270596) Roseiflexus castenholzii DSM 13941 5541571 YP_001434111.1 CDS Rcas_4061 NC_009767.1 5270727 5271341 D TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: rrs:RoseRS_2249 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 5270727..5271341 Roseiflexus castenholzii DSM 13941 5541572 YP_001434112.1 CDS Rcas_4062 NC_009767.1 5271338 5272999 D KEGG: rrs:RoseRS_2250 hypothetical protein; hypothetical protein 5271338..5272999 Roseiflexus castenholzii DSM 13941 5541573 YP_001434113.1 CDS Rcas_4063 NC_009767.1 5273055 5275148 R PFAM: UvrD/REP helicase; KEGG: rrs:RoseRS_2259 UvrD/REP helicase; UvrD/REP helicase complement(5273055..5275148) Roseiflexus castenholzii DSM 13941 5541574 YP_001434114.1 CDS Rcas_4064 NC_009767.1 5275284 5276120 D PFAM: transposase IS4 family protein; KEGG: pcu:pc1688 hypothetical protein; transposase IS4 family protein 5275284..5276120 Roseiflexus castenholzii DSM 13941 5541575 YP_001434115.1 CDS Rcas_4065 NC_009767.1 5276151 5277038 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0603 methyltransferase type 11; type 11 methyltransferase 5276151..5277038 Roseiflexus castenholzii DSM 13941 5541576 YP_001434116.1 CDS Rcas_4066 NC_009767.1 5277082 5279229 D KEGG: rrs:RoseRS_1838 hypothetical protein; hypothetical protein 5277082..5279229 Roseiflexus castenholzii DSM 13941 5541577 YP_001434117.1 CDS Rcas_4067 NC_009767.1 5279387 5280676 D KEGG: rrs:RoseRS_0604 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor protein 5279387..5280676 Roseiflexus castenholzii DSM 13941 5541578 YP_001434118.1 CDS Rcas_4068 NC_009767.1 5280673 5281971 R KEGG: rrs:RoseRS_0605 hypothetical protein; hypothetical protein complement(5280673..5281971) Roseiflexus castenholzii DSM 13941 5541579 YP_001434119.1 CDS Rcas_4069 NC_009767.1 5282028 5283299 R KEGG: rrs:RoseRS_0582 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease complement(5282028..5283299) Roseiflexus castenholzii DSM 13941 5541580 YP_001434120.1 CDS upp NC_009767.1 5283825 5284451 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 5283825..5284451 Roseiflexus castenholzii DSM 13941 5541581 YP_001434121.1 CDS Rcas_4071 NC_009767.1 5284590 5285717 D PFAM: glycosyl transferase family 4; KEGG: rrs:RoseRS_0580 glycosyl transferase, family 4; glycosyl transferase family protein 5284590..5285717 Roseiflexus castenholzii DSM 13941 5541582 YP_001434122.1 CDS Rcas_4072 NC_009767.1 5285726 5286277 R PFAM: PEBP family protein; KEGG: rrs:RoseRS_0579 PEBP family protein; PEBP family protein complement(5285726..5286277) Roseiflexus castenholzii DSM 13941 5541583 YP_001434123.1 CDS Rcas_4073 NC_009767.1 5286524 5287732 R KEGG: ade:Adeh_2376 SAM-dependent methyltransferase; SAM-dependent methyltransferase complement(5286524..5287732) Roseiflexus castenholzii DSM 13941 5541584 YP_001434124.1 CDS Rcas_4074 NC_009767.1 5288163 5288354 D KEGG: rrs:RoseRS_0871 hypothetical protein; hypothetical protein 5288163..5288354 Roseiflexus castenholzii DSM 13941 5541585 YP_001434125.1 CDS Rcas_4075 NC_009767.1 5288382 5288825 D KEGG: rrs:RoseRS_0872 hypothetical protein; hypothetical protein 5288382..5288825 Roseiflexus castenholzii DSM 13941 5541586 YP_001434126.1 CDS Rcas_4076 NC_009767.1 5288844 5289482 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: rrs:RoseRS_0873 phage SPO1 DNA polymerase-related protein; phage SPO1 DNA polymerase-like protein 5288844..5289482 Roseiflexus castenholzii DSM 13941 5541587 YP_001434127.1 CDS Rcas_4077 NC_009767.1 5289489 5290064 D KEGG: rrs:RoseRS_0874 hypothetical protein; hypothetical protein 5289489..5290064 Roseiflexus castenholzii DSM 13941 5541588 YP_001434128.1 CDS Rcas_4078 NC_009767.1 5290185 5291870 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: rrs:RoseRS_0875 beta-lactamase domain protein; beta-lactamase domain-containing protein 5290185..5291870 Roseiflexus castenholzii DSM 13941 5541589 YP_001434129.1 CDS Rcas_4079 NC_009767.1 5292031 5292699 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_0876 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(5292031..5292699) Roseiflexus castenholzii DSM 13941 5541590 YP_001434130.1 CDS Rcas_4080 NC_009767.1 5292714 5293532 R KEGG: rrs:RoseRS_0877 hypothetical protein; hypothetical protein complement(5292714..5293532) Roseiflexus castenholzii DSM 13941 5541591 YP_001434131.1 CDS Rcas_4081 NC_009767.1 5293727 5294371 D KEGG: rrs:RoseRS_0878 hypothetical protein; hypothetical protein 5293727..5294371 Roseiflexus castenholzii DSM 13941 5541592 YP_001434132.1 CDS Rcas_4082 NC_009767.1 5294433 5295287 D PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: rrs:RoseRS_0879 alpha/beta hydrolase fold; alpha/beta hydrolase 5294433..5295287 Roseiflexus castenholzii DSM 13941 5541593 YP_001434133.1 CDS Rcas_4083 NC_009767.1 5295450 5295677 D TIGRFAM: regulatory protein, FmdB family; PFAM: regulatory protein FmdB; KEGG: rrs:RoseRS_0880 regulatory protein, FmdB family; FmdB family regulatory protein 5295450..5295677 Roseiflexus castenholzii DSM 13941 5541594 YP_001434134.1 CDS Rcas_4084 NC_009767.1 5295697 5296692 D PFAM: Nucleotidyl transferase; KEGG: rrs:RoseRS_0881 nucleotidyl transferase; nucleotidyl transferase 5295697..5296692 Roseiflexus castenholzii DSM 13941 5541595 YP_001434135.1 CDS Rcas_4085 NC_009767.1 5296712 5297845 D KEGG: rrs:RoseRS_0882 hypothetical protein; hypothetical protein 5296712..5297845 Roseiflexus castenholzii DSM 13941 5541596 YP_001434136.1 CDS Rcas_4086 NC_009767.1 5297790 5298878 R KEGG: rrs:RoseRS_0883 magnesium chelatase; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; magnesium chelatase complement(5297790..5298878) Roseiflexus castenholzii DSM 13941 5541597 YP_001434137.1 CDS Rcas_4087 NC_009767.1 5298887 5299171 R PFAM: protein of unknown function DUF503; KEGG: rrs:RoseRS_0884 protein of unknown function DUF503; hypothetical protein complement(5298887..5299171) Roseiflexus castenholzii DSM 13941 5541598 YP_001434138.1 CDS Rcas_4088 NC_009767.1 5299190 5299891 R PFAM: peptidase S16 lon domain protein; KEGG: rrs:RoseRS_0885 peptidase S16, lon domain protein; peptidase S16 lon domain-containing protein complement(5299190..5299891) Roseiflexus castenholzii DSM 13941 5541599 YP_001434139.1 CDS Rcas_4089 NC_009767.1 5299895 5301088 R KEGG: rrs:RoseRS_0886 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; arginine biosynthesis bifunctional protein ArgJ complement(5299895..5301088) Roseiflexus castenholzii DSM 13941 5541600 YP_001434140.1 CDS Rcas_4090 NC_009767.1 5301095 5302285 R SMART: PUA domain containing protein; KEGG: rrs:RoseRS_0887 PUA domain containing protein; PUA domain-containing protein complement(5301095..5302285) Roseiflexus castenholzii DSM 13941 5541601 YP_001434141.1 CDS Rcas_4091 NC_009767.1 5302431 5303114 R PFAM: protein of unknown function DUF1498; KEGG: rrs:RoseRS_0888 protein of unknown function DUF1498; hypothetical protein complement(5302431..5303114) Roseiflexus castenholzii DSM 13941 5541602 YP_001434142.1 CDS Rcas_4092 NC_009767.1 5303116 5303877 R PFAM: protein of unknown function DUF323; KEGG: rrs:RoseRS_0904 protein of unknown function DUF323; hypothetical protein complement(5303116..5303877) Roseiflexus castenholzii DSM 13941 5541603 YP_001434143.1 CDS Rcas_4093 NC_009767.1 5303902 5306970 R KEGG: rrs:RoseRS_0905 SMC domain protein; SMC domain-containing protein complement(5303902..5306970) Roseiflexus castenholzii DSM 13941 5541604 YP_001434144.1 CDS Rcas_4094 NC_009767.1 5307035 5308204 R KEGG: rrs:RoseRS_0906 biotin carboxylase-like protein; biotin carboxylase-like protein complement(5307035..5308204) Roseiflexus castenholzii DSM 13941 5541605 YP_001434145.1 CDS Rcas_4095 NC_009767.1 5309134 5310027 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: cac:CAC3467 uncharacterized conserved protein, PhnB family; 3-demethylubiquinone-9 3-methyltransferase complement(5309134..5310027) Roseiflexus castenholzii DSM 13941 5541606 YP_001434146.1 CDS Rcas_4096 NC_009767.1 5310218 5311468 D PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_4478 major facilitator superfamily MFS_1; major facilitator transporter 5310218..5311468 Roseiflexus castenholzii DSM 13941 5541607 YP_001434147.1 CDS Rcas_4097 NC_009767.1 5311440 5311796 R KEGG: rrs:RoseRS_3287 hypothetical protein; hypothetical protein complement(5311440..5311796) Roseiflexus castenholzii DSM 13941 5541608 YP_001434148.1 CDS Rcas_4098 NC_009767.1 5311811 5312173 R TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_3288 anti-sigma-factor antagonist; anti-sigma-factor antagonist complement(5311811..5312173) Roseiflexus castenholzii DSM 13941 5541609 YP_001434149.1 CDS Rcas_4099 NC_009767.1 5312279 5312722 R KEGG: rrs:RoseRS_3289 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor complement(5312279..5312722) Roseiflexus castenholzii DSM 13941 5541610 YP_001434150.1 CDS Rcas_4100 NC_009767.1 5312726 5313190 R PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_3290 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor complement(5312726..5313190) Roseiflexus castenholzii DSM 13941 5541611 YP_001434151.1 CDS Rcas_4101 NC_009767.1 5313444 5314958 R KEGG: rba:RB3053 hypothetical protein; hypothetical protein complement(5313444..5314958) Roseiflexus castenholzii DSM 13941 5541612 YP_001434152.1 CDS Rcas_4102 NC_009767.1 5315577 5317127 R PFAM: carboxyl transferase; KEGG: rrs:RoseRS_3291 carboxyl transferase; carboxyl transferase complement(5315577..5317127) Roseiflexus castenholzii DSM 13941 5541613 YP_001434153.1 CDS Rcas_4103 NC_009767.1 5317294 5317635 D KEGG: rrs:RoseRS_3292 hypothetical protein; hypothetical protein 5317294..5317635 Roseiflexus castenholzii DSM 13941 5541614 YP_001434154.1 CDS Rcas_4104 NC_009767.1 5317643 5318155 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3293 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5317643..5318155) Roseiflexus castenholzii DSM 13941 5541615 YP_001434155.1 CDS Rcas_4105 NC_009767.1 5318260 5318589 D TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rrs:RoseRS_3294 thioredoxin; thioredoxin 5318260..5318589 Roseiflexus castenholzii DSM 13941 5541616 YP_001434156.1 CDS Rcas_4106 NC_009767.1 5318608 5318892 D PFAM: protein of unknown function DUF156; KEGG: rrs:RoseRS_3295 protein of unknown function DUF156; hypothetical protein 5318608..5318892 Roseiflexus castenholzii DSM 13941 5541617 YP_001434157.1 CDS Rcas_4107 NC_009767.1 5319430 5320149 R KEGG: osa:4324628 Os01g0750600; hypothetical protein complement(5319430..5320149) Roseiflexus castenholzii DSM 13941 5541618 YP_001434158.1 CDS Rcas_4108 NC_009767.1 5320139 5320726 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_3810 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor complement(5320139..5320726) Roseiflexus castenholzii DSM 13941 5541619 YP_001434159.1 CDS Rcas_4109 NC_009767.1 5320923 5321915 D with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; dihydroxyacetone kinase subunit DhaK 5320923..5321915 Roseiflexus castenholzii DSM 13941 5541620 YP_001434160.1 CDS Rcas_4110 NC_009767.1 5321999 5322661 D TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: rrs:RoseRS_3298 dihydroxyacetone kinase, L subunit; dihydroxyacetone kinase subunit L 5321999..5322661 Roseiflexus castenholzii DSM 13941 5541621 YP_001434161.1 CDS Rcas_4111 NC_009767.1 5322679 5324349 D PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rrs:RoseRS_3299 FAD dependent oxidoreductase; FAD dependent oxidoreductase 5322679..5324349 Roseiflexus castenholzii DSM 13941 5541622 YP_001434162.1 CDS Rcas_4112 NC_009767.1 5324413 5325657 D sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 5324413..5325657 Roseiflexus castenholzii DSM 13941 5541623 YP_001434163.1 CDS glpC NC_009767.1 5325657 5326907 D anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 5325657..5326907 Roseiflexus castenholzii DSM 13941 5541624 YP_001434164.1 CDS Rcas_4114 NC_009767.1 5326909 5327319 D PFAM: PTS system fructose subfamily IIA component; KEGG: rrs:RoseRS_3302 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA 5326909..5327319 Roseiflexus castenholzii DSM 13941 5541625 YP_001434165.1 CDS Rcas_4115 NC_009767.1 5327375 5327650 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: rrs:RoseRS_3303 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 5327375..5327650 Roseiflexus castenholzii DSM 13941 5541626 YP_001434166.1 CDS Rcas_4116 NC_009767.1 5327651 5329321 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: rrs:RoseRS_3304 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 5327651..5329321 Roseiflexus castenholzii DSM 13941 5541627 YP_001434167.1 CDS Rcas_4117 NC_009767.1 5329318 5331321 D PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rrs:RoseRS_3305 protein kinase; serine/threonine protein kinase 5329318..5331321 Roseiflexus castenholzii DSM 13941 5541628 YP_001434168.1 CDS Rcas_4118 NC_009767.1 5331455 5332831 D PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: rrs:RoseRS_1930 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; polynucleotide adenylyltransferase 5331455..5332831 Roseiflexus castenholzii DSM 13941 5541629 YP_001434169.1 CDS Rcas_4119 NC_009767.1 5332923 5333372 D PFAM: heat shock protein Hsp20; KEGG: rrs:RoseRS_1929 heat shock protein HSP20; heat shock protein Hsp20 5332923..5333372 Roseiflexus castenholzii DSM 13941 5541630 YP_001434170.1 CDS Rcas_4120 NC_009767.1 5333563 5334453 D PFAM: peptidase M48 Ste24p; KEGG: rrs:RoseRS_1928 peptidase M48, Ste24p; peptidase M48 Ste24p 5333563..5334453 Roseiflexus castenholzii DSM 13941 5541631 YP_001434171.1 CDS thiE NC_009767.1 5334717 5335403 D Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 5334717..5335403 Roseiflexus castenholzii DSM 13941 5541632 YP_001434172.1 CDS Rcas_4122 NC_009767.1 5335476 5336288 D catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 5335476..5336288 Roseiflexus castenholzii DSM 13941 5541633 YP_001434173.1 CDS Rcas_4123 NC_009767.1 5336538 5337062 D TIGRFAM: thiW protein; PFAM: ThiW family protein; KEGG: rrs:RoseRS_1925 ThiW protein; thiW protein 5336538..5337062 Roseiflexus castenholzii DSM 13941 5541634 YP_001434174.1 CDS Rcas_4124 NC_009767.1 5337059 5338639 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1924 ABC transporter related; ABC transporter-like protein 5337059..5338639 Roseiflexus castenholzii DSM 13941 5541635 YP_001434175.1 CDS Rcas_4125 NC_009767.1 5340649 5341302 D PFAM: cobalt transport protein; KEGG: rrs:RoseRS_1922 cobalt transport protein; cobalt transport protein 5340649..5341302 Roseiflexus castenholzii DSM 13941 5541636 YP_001434176.1 CDS Rcas_4126 NC_009767.1 5341313 5342113 D TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: rrs:RoseRS_1921 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 5341313..5342113 Roseiflexus castenholzii DSM 13941 5541637 YP_001434177.1 CDS Rcas_4127 NC_009767.1 5342245 5342820 D KEGG: rrs:RoseRS_4091 DNA polymerase, beta domain protein region; hypothetical protein 5342245..5342820 Roseiflexus castenholzii DSM 13941 5541638 YP_001434178.1 CDS Rcas_4128 NC_009767.1 5342798 5343202 D PFAM: HEPN domain protein; KEGG: rrs:RoseRS_4090 HEPN domain protein; HEPN domain-containing protein 5342798..5343202 Roseiflexus castenholzii DSM 13941 5541639 YP_001434179.1 CDS Rcas_4129 NC_009767.1 5343216 5344934 R PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; WD40 domain protein beta Propeller; KEGG: rrs:RoseRS_1915 WD40 domain protein beta propeller; WD40 domain-containing protein complement(5343216..5344934) Roseiflexus castenholzii DSM 13941 5541640 YP_001434180.1 CDS Rcas_4130 NC_009767.1 5345129 5345998 D PFAM: alpha/beta hydrolase fold; KEGG: rrs:RoseRS_1914 alpha/beta hydrolase fold; alpha/beta hydrolase 5345129..5345998 Roseiflexus castenholzii DSM 13941 5541641 YP_001434181.1 CDS Rcas_4131 NC_009767.1 5346011 5348044 D PFAM: glycosyl transferase family 39; KEGG: rrs:RoseRS_0410 glycosyl transferase, family 39; glycosyl transferase family protein 5346011..5348044 Roseiflexus castenholzii DSM 13941 5541642 YP_001434182.1 CDS Rcas_4132 NC_009767.1 5348252 5349199 D KEGG: rrs:RoseRS_1913 hypothetical protein; hypothetical protein 5348252..5349199 Roseiflexus castenholzii DSM 13941 5541643 YP_001434183.1 CDS Rcas_4134 NC_009767.1 5351524 5351877 D KEGG: rrs:RoseRS_3372 hypothetical protein; hypothetical protein 5351524..5351877 Roseiflexus castenholzii DSM 13941 5541645 YP_001434184.1 CDS Rcas_4135 NC_009767.1 5352339 5354291 R KEGG: rrs:RoseRS_3371 PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region; PAS/PAC sensor protein complement(5352339..5354291) Roseiflexus castenholzii DSM 13941 5541646 YP_001434185.1 CDS Rcas_4136 NC_009767.1 5354657 5355172 R KEGG: rrs:RoseRS_3370 hypothetical protein; hypothetical protein complement(5354657..5355172) Roseiflexus castenholzii DSM 13941 5541647 YP_001434186.1 CDS Rcas_4137 NC_009767.1 5355178 5356473 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3369 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5355178..5356473) Roseiflexus castenholzii DSM 13941 5541648 YP_001434187.1 CDS Rcas_4138 NC_009767.1 5356473 5358347 R PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: rrs:RoseRS_3368 glycosyl transferase, family 2; glycosyl transferase family protein complement(5356473..5358347) Roseiflexus castenholzii DSM 13941 5541649 YP_001434188.1 CDS Rcas_4139 NC_009767.1 5358374 5360194 R PFAM: ABC-2 type transporter; KEGG: rrs:RoseRS_3367 ABC-2 type transporter; ABC-2 type transporter complement(5358374..5360194) Roseiflexus castenholzii DSM 13941 5541650 YP_001434189.1 CDS Rcas_4140 NC_009767.1 5360198 5361937 R KEGG: rrs:RoseRS_3366 hypothetical protein; hypothetical protein complement(5360198..5361937) Roseiflexus castenholzii DSM 13941 5541651 YP_001434190.1 CDS Rcas_4141 NC_009767.1 5361925 5363790 R PFAM: polysaccharide deacetylase; KEGG: rrs:RoseRS_3365 polysaccharide deacetylase; polysaccharide deacetylase complement(5361925..5363790) Roseiflexus castenholzii DSM 13941 5541652 YP_001434191.1 CDS Rcas_4142 NC_009767.1 5364017 5364577 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 5364017..5364577 Roseiflexus castenholzii DSM 13941 5541653 YP_001434192.1 CDS Rcas_4143 NC_009767.1 5364580 5365284 R PFAM: phosphatidate cytidylyltransferase; KEGG: rrs:RoseRS_3363 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(5364580..5365284) Roseiflexus castenholzii DSM 13941 5541654 YP_001434193.1 CDS Rcas_4144 NC_009767.1 5365885 5367171 R PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3362 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein complement(5365885..5367171) Roseiflexus castenholzii DSM 13941 5541655 YP_001434194.1 CDS Rcas_4145 NC_009767.1 5367188 5367586 R KEGG: pth:PTH_2559 uncharacterized protein conserved in cyanobacteria; hypothetical protein complement(5367188..5367586) Roseiflexus castenholzii DSM 13941 5541656 YP_001434195.1 CDS Rcas_4146 NC_009767.1 5367656 5369137 R PFAM: FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3360 D-lactate dehydrogenase (cytochrome); D-lactate dehydrogenase complement(5367656..5369137) Roseiflexus castenholzii DSM 13941 5541657 YP_001434196.1 CDS Rcas_4147 NC_009767.1 5369134 5369886 R PFAM: Peptidoglycan-binding LysM; KEGG: par:Psyc_1273 probable membrane-bound lytic murein transglycosylase D precursor; peptidoglycan-binding protein LysM complement(5369134..5369886) Roseiflexus castenholzii DSM 13941 5541658 YP_001434197.1 CDS Rcas_4148 NC_009767.1 5370042 5371574 R acts as a promotor non-specific transcription repressor; circadian clock protein KaiC complement(5370042..5371574) Roseiflexus castenholzii DSM 13941 5541659 YP_001434198.1 CDS Rcas_4149 NC_009767.1 5371571 5371876 R PFAM: KaiB domain protein; KEGG: rrs:RoseRS_3358 KaiB domain protein; KaiB domain-containing protein complement(5371571..5371876) Roseiflexus castenholzii DSM 13941 5541660 YP_001434199.1 CDS Rcas_4150 NC_009767.1 5371950 5372825 R PFAM: response regulator receiver; KEGG: rrs:RoseRS_3357 response regulator receiver protein; response regulator receiver protein complement(5371950..5372825) Roseiflexus castenholzii DSM 13941 5541661 YP_001434200.1 CDS Rcas_4151 NC_009767.1 5372848 5374086 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: rrs:RoseRS_3356 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase complement(5372848..5374086) Roseiflexus castenholzii DSM 13941 5541662 YP_001434201.1 CDS Rcas_4152 NC_009767.1 5374259 5374627 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_3355 two component transcriptional regulator, fis family; response regulator receiver protein 5374259..5374627 Roseiflexus castenholzii DSM 13941 5541663 YP_001434202.1 CDS Rcas_4153 NC_009767.1 5375062 5375865 D PFAM: SAF domain protein; KEGG: rrs:RoseRS_3354 SAF domain; SAF domain-containing protein 5375062..5375865 Roseiflexus castenholzii DSM 13941 5541664 YP_001434203.1 CDS Rcas_4154 NC_009767.1 5376054 5377313 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_3353 response regulator receiver protein; response regulator receiver protein 5376054..5377313 Roseiflexus castenholzii DSM 13941 5541665 YP_001434204.1 CDS Rcas_4155 NC_009767.1 5377329 5378744 D PFAM: type II secretion system protein E; KEGG: rrs:RoseRS_3352 type II secretion system protein E; type II secretion system protein E 5377329..5378744 Roseiflexus castenholzii DSM 13941 5541666 YP_001434205.1 CDS Rcas_4156 NC_009767.1 5378759 5379730 D PFAM: type II secretion system protein; KEGG: rrs:RoseRS_3351 type II secretion system protein; type II secretion system protein 5378759..5379730 Roseiflexus castenholzii DSM 13941 5541667 YP_001434206.1 CDS Rcas_4157 NC_009767.1 5379730 5380659 D PFAM: type II secretion system protein; KEGG: rrs:RoseRS_3350 type II secretion system protein; type II secretion system protein 5379730..5380659 Roseiflexus castenholzii DSM 13941 5541668 YP_001434207.1 CDS Rcas_4158 NC_009767.1 5380656 5381945 D PFAM: von Willebrand factor type A; VWA containing CoxE family protein; KEGG: rrs:RoseRS_3349 von Willebrand factor, type A; von Willebrand factor A 5380656..5381945 Roseiflexus castenholzii DSM 13941 5541669 YP_001434208.1 CDS Rcas_4159 NC_009767.1 5382198 5383595 D PFAM: TadE family protein; KEGG: rrs:RoseRS_3348 TadE family protein; TadE family protein 5382198..5383595 Roseiflexus castenholzii DSM 13941 5541670 YP_001434209.1 CDS Rcas_4160 NC_009767.1 5383732 5384127 D PFAM: TadE family protein; KEGG: rrs:RoseRS_3347 TadE family protein; TadE family protein 5383732..5384127 Roseiflexus castenholzii DSM 13941 5541671 YP_001434210.1 CDS Rcas_4161 NC_009767.1 5384124 5385302 D KEGG: rrs:RoseRS_3346 hypothetical protein; hypothetical protein 5384124..5385302 Roseiflexus castenholzii DSM 13941 5541672 YP_001434211.1 CDS Rcas_4162 NC_009767.1 5385428 5386381 R TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: rrs:RoseRS_3345 peptide chain release factor 2; peptide chain release factor 2 complement(5385428..5386381) Roseiflexus castenholzii DSM 13941 5541673 YP_001434212.1 CDS Rcas_4163 NC_009767.1 5386548 5387318 R PFAM: Silent information regulator protein Sir2; KEGG: rrs:RoseRS_3344 silent information regulator protein Sir2; silent information regulator protein Sir2 complement(5386548..5387318) Roseiflexus castenholzii DSM 13941 5541674 YP_001434213.1 CDS Rcas_4164 NC_009767.1 5387671 5388396 D PFAM: LIM zinc-binding protein; KEGG: rrs:RoseRS_3343 LIM, zinc-binding protein; LIM zinc-binding protein 5387671..5388396 Roseiflexus castenholzii DSM 13941 5541675 YP_001434214.1 CDS Rcas_4165 NC_009767.1 5388520 5389707 D KEGG: rrs:RoseRS_3512 hypothetical protein; hypothetical protein 5388520..5389707 Roseiflexus castenholzii DSM 13941 5541676 YP_001434215.1 CDS Rcas_4166 NC_009767.1 5389990 5390550 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rrs:RoseRS_3311 metal dependent phosphohydrolase; metal dependent phosphohydrolase 5389990..5390550 Roseiflexus castenholzii DSM 13941 5541677 YP_001434216.1 CDS Rcas_4167 NC_009767.1 5390600 5392324 D PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_3310 alpha amylase, catalytic region; alpha amylase 5390600..5392324 Roseiflexus castenholzii DSM 13941 5541678 YP_001434217.1 CDS Rcas_4168 NC_009767.1 5392676 5394565 R molecular chaperone; heat shock protein 90 complement(5392676..5394565) Roseiflexus castenholzii DSM 13941 5541679 YP_001434218.1 CDS Rcas_4169 NC_009767.1 5394790 5396223 R PFAM: secretion protein HlyD family protein; KEGG: rrs:RoseRS_4302 secretion protein HlyD family protein; secretion protein HlyD family protein complement(5394790..5396223) Roseiflexus castenholzii DSM 13941 5541680 YP_001434219.1 CDS Rcas_4170 NC_009767.1 5396332 5399847 R PFAM: acriflavin resistance protein; KEGG: rrs:RoseRS_4303 acriflavin resistance protein; acriflavin resistance protein complement(5396332..5399847) Roseiflexus castenholzii DSM 13941 5541681 YP_001434220.1 CDS Rcas_4171 NC_009767.1 5400440 5401051 D PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_4304 transcriptional regulator, TetR family; TetR family transcriptional regulator 5400440..5401051 Roseiflexus castenholzii DSM 13941 5541682 YP_001434221.1 CDS Rcas_4172 NC_009767.1 5401974 5402972 R hypothetical protein complement(5401974..5402972) Roseiflexus castenholzii DSM 13941 5541683 YP_001434222.1 CDS Rcas_4173 NC_009767.1 5403268 5404989 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rrs:RoseRS_4311 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase complement(5403268..5404989) Roseiflexus castenholzii DSM 13941 5541684 YP_001434223.1 CDS Rcas_4174 NC_009767.1 5405540 5406457 D PFAM: Radical SAM domain protein; KEGG: rrs:RoseRS_4313 radical SAM domain protein; radical SAM domain-containing protein 5405540..5406457 Roseiflexus castenholzii DSM 13941 5541685 YP_001434224.1 CDS Rcas_4175 NC_009767.1 5406454 5406951 D KEGG: rrs:RoseRS_4314 hypothetical protein; hypothetical protein 5406454..5406951 Roseiflexus castenholzii DSM 13941 5541686 YP_001434225.1 CDS Rcas_4176 NC_009767.1 5407008 5407778 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: btl:BALH_2563 methyltransferase; type 11 methyltransferase 5407008..5407778 Roseiflexus castenholzii DSM 13941 5541687 YP_001434226.1 CDS Rcas_4177 NC_009767.1 5407934 5408581 D KEGG: nma:NMA0324 adhesin; hypothetical protein 5407934..5408581 Roseiflexus castenholzii DSM 13941 5541688 YP_001434227.1 CDS Rcas_4178 NC_009767.1 5408600 5408806 D hypothetical protein 5408600..5408806 Roseiflexus castenholzii DSM 13941 5541689 YP_001434228.1 CDS Rcas_4179 NC_009767.1 5408961 5410016 R PFAM: oxidoreductase molybdopterin binding; KEGG: rrs:RoseRS_4315 oxidoreductase, molybdopterin binding; molybdopterin binding oxidoreductase complement(5408961..5410016) Roseiflexus castenholzii DSM 13941 5541690 YP_001434229.1 CDS Rcas_4180 NC_009767.1 5410020 5410634 R KEGG: rrs:RoseRS_4316 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(5410020..5410634) Roseiflexus castenholzii DSM 13941 5541691 YP_001434230.1 CDS Rcas_4181 NC_009767.1 5410647 5412638 R PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rrs:RoseRS_4317 amidohydrolase; amidohydrolase complement(5410647..5412638) Roseiflexus castenholzii DSM 13941 5541692 YP_001434231.1 CDS Rcas_4183 NC_009767.1 5413189 5414301 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: xfa:XF0641 DNA methyltransferase; DNA methylase N-4/N-6 domain-containing protein complement(5413189..5414301) Roseiflexus castenholzii DSM 13941 5541694 YP_001434232.1 CDS Rcas_4184 NC_009767.1 5414309 5414878 R KEGG: rrs:RoseRS_4319 hypothetical protein; hypothetical protein complement(5414309..5414878) Roseiflexus castenholzii DSM 13941 5541695 YP_001434233.1 CDS Rcas_4185 NC_009767.1 5414899 5415249 R KEGG: rrs:RoseRS_4320 hypothetical protein; hypothetical protein complement(5414899..5415249) Roseiflexus castenholzii DSM 13941 5541696 YP_001434234.1 CDS Rcas_4186 NC_009767.1 5415292 5416359 R TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: rrs:RoseRS_4321 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein complement(5415292..5416359) Roseiflexus castenholzii DSM 13941 5541697 YP_001434235.1 CDS Rcas_4187 NC_009767.1 5416356 5416826 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rrs:RoseRS_4322 flavin reductase domain protein, FMN-binding; flavin reductase domain-containing protein complement(5416356..5416826) Roseiflexus castenholzii DSM 13941 5541698 YP_001434236.1 CDS Rcas_4188 NC_009767.1 5417054 5420596 R PFAM: UvrD/REP helicase; protein of unknown function DUF955; KEGG: rrs:RoseRS_0060 UvrD/REP helicase; UvrD/REP helicase complement(5417054..5420596) Roseiflexus castenholzii DSM 13941 5541699 YP_001434237.1 CDS Rcas_4189 NC_009767.1 5421031 5421651 R SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0059 helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(5421031..5421651) Roseiflexus castenholzii DSM 13941 5541700 YP_001434238.1 CDS Rcas_4190 NC_009767.1 5421648 5422310 R TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_0058 RNA polymerase, sigma-24 subunit, ECF subfamily; FliA/WhiG family RNA polymerase sigma 28 subunit complement(5421648..5422310) Roseiflexus castenholzii DSM 13941 5541701 YP_001434239.1 CDS Rcas_4191 NC_009767.1 5422770 5423069 D KEGG: rrs:RoseRS_0057 hypothetical protein; hypothetical protein 5422770..5423069 Roseiflexus castenholzii DSM 13941 5541702 YP_001434240.1 CDS Rcas_4192 NC_009767.1 5423293 5423511 R KEGG: rrs:RoseRS_0054 hypothetical protein; hypothetical protein complement(5423293..5423511) Roseiflexus castenholzii DSM 13941 5541703 YP_001434241.1 CDS Rcas_4193 NC_009767.1 5423743 5424909 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0053 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5423743..5424909 Roseiflexus castenholzii DSM 13941 5541704 YP_001434242.1 CDS Rcas_4194 NC_009767.1 5425194 5426342 D PFAM: peptidase M23B; KEGG: rrs:RoseRS_0052 peptidase M23B; peptidase M23B 5425194..5426342 Roseiflexus castenholzii DSM 13941 5541705 YP_001434243.1 CDS Rcas_4195 NC_009767.1 5426755 5428716 R KEGG: rrs:RoseRS_0047 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B complement(5426755..5428716) Roseiflexus castenholzii DSM 13941 5541706 YP_001434244.1 CDS Rcas_4196 NC_009767.1 5428872 5429843 R KEGG: rrs:RoseRS_0046 hypothetical protein; hypothetical protein complement(5428872..5429843) Roseiflexus castenholzii DSM 13941 5541707 YP_001434245.1 CDS Rcas_4197 NC_009767.1 5430074 5431810 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: rrs:RoseRS_0045 GTPase subunit of restriction endonuclease-like protein; ATPase 5430074..5431810 Roseiflexus castenholzii DSM 13941 5541708 YP_001434246.1 CDS Rcas_4199 NC_009767.1 5433872 5435227 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 5433872..5435227 Roseiflexus castenholzii DSM 13941 5541710 YP_001434247.1 CDS Rcas_4200 NC_009767.1 5435298 5435717 R PFAM: protein of unknown function DUF454; KEGG: rrs:RoseRS_0042 protein of unknown function DUF454; hypothetical protein complement(5435298..5435717) Roseiflexus castenholzii DSM 13941 5541711 YP_001434248.1 CDS Rcas_4203 NC_009767.1 5436772 5437263 D PFAM: CheW domain protein; KEGG: rrs:RoseRS_0039 CheW protein; CheW protein 5436772..5437263 Roseiflexus castenholzii DSM 13941 5541714 YP_001434249.1 CDS Rcas_4204 NC_009767.1 5437672 5438091 D KEGG: rrs:RoseRS_0038 hypothetical protein; hypothetical protein 5437672..5438091 Roseiflexus castenholzii DSM 13941 5541715 YP_001434250.1 CDS Rcas_4205 NC_009767.1 5438099 5439640 D PFAM: chemotaxis sensory transducer; KEGG: rrs:RoseRS_0037 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 5438099..5439640 Roseiflexus castenholzii DSM 13941 5541716 YP_001434251.1 CDS Rcas_4206 NC_009767.1 5439744 5441969 D PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rrs:RoseRS_0036 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase 5439744..5441969 Roseiflexus castenholzii DSM 13941 5541717 YP_001434252.1 CDS Rcas_4207 NC_009767.1 5442041 5442403 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_0035 response regulator receiver protein; response regulator receiver protein 5442041..5442403 Roseiflexus castenholzii DSM 13941 5541718 YP_001434253.1 CDS Rcas_4208 NC_009767.1 5442584 5443717 D PFAM: CheB methylesterase; response regulator receiver; KEGG: rrs:RoseRS_0034 response regulator receiver modulated CheB methylesterase; response regulator receiver modulated CheB methylesterase 5442584..5443717 Roseiflexus castenholzii DSM 13941 5541719 YP_001434254.1 CDS Rcas_4209 NC_009767.1 5444002 5445510 D KEGG: rrs:RoseRS_0033 protein-glutamate O-methyltransferase; PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; TPR repeat-containing CheR-type MCP methyltransferase 5444002..5445510 Roseiflexus castenholzii DSM 13941 5541720 YP_001434255.1 CDS Rcas_4210 NC_009767.1 5445517 5446602 D PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_0032 stage II sporulation E family protein; Ser/Thr phosphatase 5445517..5446602 Roseiflexus castenholzii DSM 13941 5541721 YP_001434256.1 CDS Rcas_4211 NC_009767.1 5446724 5448292 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0031 TPR repeat-containing protein; hypothetical protein 5446724..5448292 Roseiflexus castenholzii DSM 13941 5541722 YP_001434257.1 CDS Rcas_4212 NC_009767.1 5448314 5448748 D PFAM: ATP-binding region ATPase domain protein; KEGG: rrs:RoseRS_0030 anti-sigma regulatory factor, serine/threonine protein kinase; anti-sigma regulatory factor 5448314..5448748 Roseiflexus castenholzii DSM 13941 5541723 YP_001434258.1 CDS Rcas_4213 NC_009767.1 5448738 5449082 D PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rrs:RoseRS_0029 anti-sigma-factor antagonist; anti-sigma-factor antagonist 5448738..5449082 Roseiflexus castenholzii DSM 13941 5541724 YP_001434259.1 CDS Rcas_4214 NC_009767.1 5449502 5450632 R KEGG: rrs:RoseRS_0028 hypothetical protein; hypothetical protein complement(5449502..5450632) Roseiflexus castenholzii DSM 13941 5541725 YP_001434260.1 CDS Rcas_4215 NC_009767.1 5450649 5451458 D PFAM: regulatory protein TetR; KEGG: rrs:RoseRS_0027 transcriptional regulator, TetR family; TetR family transcriptional regulator 5450649..5451458 Roseiflexus castenholzii DSM 13941 5541726 YP_001434261.1 CDS Rcas_4216 NC_009767.1 5453613 5455073 D KEGG: rrs:RoseRS_0026 isochorismate synthase; TIGRFAM: isochorismate synthase; PFAM: Anthranilate synthase component I and chorismate binding protein; isochorismate synthase 5453613..5455073 Roseiflexus castenholzii DSM 13941 5541727 YP_001434262.1 CDS Rcas_4217 NC_009767.1 5455439 5457181 D TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: rrs:RoseRS_0025 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 5455439..5457181 Roseiflexus castenholzii DSM 13941 5541728 YP_001434263.1 CDS Rcas_4218 NC_009767.1 5457280 5458143 D TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rrs:RoseRS_0024 naphthoate synthase; naphthoate synthase 5457280..5458143 Roseiflexus castenholzii DSM 13941 5541729 YP_001434264.1 CDS Rcas_4219 NC_009767.1 5458140 5459615 D TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: rrs:RoseRS_0023 O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase 5458140..5459615 Roseiflexus castenholzii DSM 13941 5541730 YP_001434265.1 CDS Rcas_4220 NC_009767.1 5459900 5460847 R PFAM: aminoglycoside phosphotransferase; KEGG: sma:SAV5110 phosphotransferase; aminoglycoside phosphotransferase complement(5459900..5460847) Roseiflexus castenholzii DSM 13941 5541731 YP_001434266.1 CDS Rcas_4221 NC_009767.1 5461271 5461570 R KEGG: rrs:RoseRS_0018 hypothetical protein; hypothetical protein complement(5461271..5461570) Roseiflexus castenholzii DSM 13941 5541732 YP_001434267.1 CDS Rcas_4222 NC_009767.1 5461758 5462687 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; KEGG: reh:H16_B0754 transcriptional regulator, LuxR-family; ATP-dependent transcription regulator LuxR 5461758..5462687 Roseiflexus castenholzii DSM 13941 5541733 YP_001434268.1 CDS Rcas_4223 NC_009767.1 5462974 5463612 D PFAM: protein of unknown function DUF1568; KEGG: rba:RB693 hypothetical protein; hypothetical protein 5462974..5463612 Roseiflexus castenholzii DSM 13941 5541734 YP_001434269.1 CDS Rcas_4224 NC_009767.1 5464244 5464756 D PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRA0622 acetyltransferase; N-acetyltransferase GCN5 5464244..5464756 Roseiflexus castenholzii DSM 13941 5541735 YP_001434270.1 CDS Rcas_4225 NC_009767.1 5464796 5465557 R PFAM: Abortive infection protein; KEGG: mac:MA2652 hypothetical protein; abortive infection protein complement(5464796..5465557) Roseiflexus castenholzii DSM 13941 5541736 YP_001434271.1 CDS Rcas_4226 NC_009767.1 5465677 5467725 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: two-component sensor; integral membrane sensor signal transduction histidine kinase complement(5465677..5467725) Roseiflexus castenholzii DSM 13941 5541737 YP_001434272.1 CDS Rcas_4227 NC_009767.1 5467730 5468371 R PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: DNA-binding response regulator; two component LuxR family transcriptional regulator complement(5467730..5468371) Roseiflexus castenholzii DSM 13941 5541738 YP_001434273.1 CDS Rcas_4228 NC_009767.1 5469867 5470247 D PFAM: response regulator receiver; KEGG: tfu:Tfu_2233 regulatory protein, LuxR:response regulator receiver; response regulator receiver protein 5469867..5470247 Roseiflexus castenholzii DSM 13941 5541739 YP_001434274.1 CDS Rcas_4229 NC_009767.1 5470244 5470540 D KEGG: pcu:pc1644 hypothetical protein; hypothetical protein 5470244..5470540 Roseiflexus castenholzii DSM 13941 5541740 YP_001434275.1 CDS Rcas_4230 NC_009767.1 5470547 5471155 D PFAM: protein of unknown function DUF1211; KEGG: rxy:Rxyl_2895 protein of unknown function DUF1211; hypothetical protein 5470547..5471155 Roseiflexus castenholzii DSM 13941 5541741 YP_001434276.1 CDS Rcas_4231 NC_009767.1 5471339 5471959 R KEGG: tel:tll2424 unknown protein; hypothetical protein complement(5471339..5471959) Roseiflexus castenholzii DSM 13941 5541742 YP_001434277.1 CDS Rcas_4232 NC_009767.1 5471902 5472561 R TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: mth:MTH328 hypothetical protein; CRISPR-associated RAMP Cmr1 family protein complement(5471902..5472561) Roseiflexus castenholzii DSM 13941 5541743 YP_001434278.1 CDS Rcas_4233 NC_009767.1 5472683 5472985 R hypothetical protein complement(5472683..5472985) Roseiflexus castenholzii DSM 13941 5541744 YP_001434279.1 CDS Rcas_4234 NC_009767.1 5473213 5473872 R KEGG: vco:VC0395_0898 hypothetical protein; hypothetical protein complement(5473213..5473872) Roseiflexus castenholzii DSM 13941 5541745 YP_001434280.1 CDS Rcas_4235 NC_009767.1 5474275 5474733 R PFAM: AIG2 family protein; KEGG: cyb:CYB_1529 hypothetical protein; AIG2 family protein complement(5474275..5474733) Roseiflexus castenholzii DSM 13941 5541746 YP_001434281.1 CDS Rcas_4236 NC_009767.1 5475351 5476025 R KEGG: plu:plu3301 hypothetical protein; hypothetical protein complement(5475351..5476025) Roseiflexus castenholzii DSM 13941 5541747 YP_001434282.1 CDS Rcas_4237 NC_009767.1 5476022 5477134 R KEGG: aav:Aave_0765 hypothetical protein; hypothetical protein complement(5476022..5477134) Roseiflexus castenholzii DSM 13941 5541748 YP_001434283.1 CDS Rcas_4238 NC_009767.1 5477491 5478318 R KEGG: rrs:RoseRS_2587 hypothetical protein; hypothetical protein complement(5477491..5478318) Roseiflexus castenholzii DSM 13941 5541749 YP_001434284.1 CDS Rcas_4239 NC_009767.1 5478329 5478718 R KEGG: rrs:RoseRS_2588 hypothetical protein; hypothetical protein complement(5478329..5478718) Roseiflexus castenholzii DSM 13941 5541750 YP_001434285.1 CDS Rcas_4240 NC_009767.1 5478708 5479694 R TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_2589 CRISPR-associated RAMP protein, Cmr4 family; CRISPR-associated RAMP Cmr4 family protein complement(5478708..5479694) Roseiflexus castenholzii DSM 13941 5541751 YP_001434286.1 CDS Rcas_4241 NC_009767.1 5479705 5482494 R TIGRFAM: CRISPR-associated protein Csx11; KEGG: rrs:RoseRS_2590 hypothetical protein; CRISPR-associated Csx11 family protein complement(5479705..5482494) Roseiflexus castenholzii DSM 13941 5541752 YP_001434287.1 CDS Rcas_4242 NC_009767.1 5482491 5483810 R PFAM: protein of unknown function DUF324; KEGG: rrs:RoseRS_2591 protein of unknown function DUF324; hypothetical protein complement(5482491..5483810) Roseiflexus castenholzii DSM 13941 5541753 YP_001434288.1 CDS Rcas_4243 NC_009767.1 5483807 5484511 R hypothetical protein complement(5483807..5484511) Roseiflexus castenholzii DSM 13941 5541754 YP_001434289.1 CDS Rcas_4244 NC_009767.1 5484508 5486124 R KEGG: rrs:RoseRS_2592 hypothetical protein; hypothetical protein complement(5484508..5486124) Roseiflexus castenholzii DSM 13941 5541755 YP_001434290.1 CDS Rcas_4245 NC_009767.1 5486121 5487191 R TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: rrs:RoseRS_2593 CRISPR-associated RAMP protein, Cmr1 family; CRISPR-associated RAMP Cmr1 family protein complement(5486121..5487191) Roseiflexus castenholzii DSM 13941 5541756 YP_001434291.1 CDS Rcas_4246 NC_009767.1 5488068 5489849 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_0014 alpha amylase, catalytic region; alpha amylase catalytic domain-containing protein complement(5488068..5489849) Roseiflexus castenholzii DSM 13941 5541757 YP_001434292.1 CDS Rcas_4247 NC_009767.1 5489846 5490298 R KEGG: rrs:RoseRS_0013 hypothetical protein; hypothetical protein complement(5489846..5490298) Roseiflexus castenholzii DSM 13941 5541758 YP_001434293.1 CDS Rcas_4248 NC_009767.1 5490621 5491574 R PFAM: phospholipid/glycerol acyltransferase; KEGG: rrs:RoseRS_0012 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase complement(5490621..5491574) Roseiflexus castenholzii DSM 13941 5541759 YP_001434294.1 CDS Rcas_4249 NC_009767.1 5491582 5492394 R KEGG: rrs:RoseRS_0011 deoxyribodipyrimidine photolyase-like protein; deoxyribodipyrimidine photolyase-like protein complement(5491582..5492394) Roseiflexus castenholzii DSM 13941 5541760 YP_001434295.1 CDS Rcas_4250 NC_009767.1 5492439 5492600 R KEGG: cme:CML092C hypothetical protein, conserved Pfam: zf-HIT; hypothetical protein complement(5492439..5492600) Roseiflexus castenholzii DSM 13941 5541761 YP_001434296.1 CDS Rcas_4251 NC_009767.1 5492720 5494246 R PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: rrs:RoseRS_0009 deoxyribodipyrimidine photolyase-related protein; deoxyribodipyrimidine photolyase-like protein complement(5492720..5494246) Roseiflexus castenholzii DSM 13941 5541762 YP_001434297.1 CDS Rcas_4252 NC_009767.1 5494738 5495475 D PFAM: Phosphoglycerate mutase; KEGG: rrs:RoseRS_0008 phosphoglycerate mutase; phosphoglycerate mutase 5494738..5495475 Roseiflexus castenholzii DSM 13941 5541763 YP_001434298.1 CDS Rcas_4253 NC_009767.1 5495503 5496015 D KEGG: rrs:RoseRS_0007 hypothetical protein; hypothetical protein 5495503..5496015 Roseiflexus castenholzii DSM 13941 5541764 YP_001434299.1 CDS Rcas_4254 NC_009767.1 5496017 5496748 D KEGG: rrs:RoseRS_0006 hypothetical protein; hypothetical protein 5496017..5496748 Roseiflexus castenholzii DSM 13941 5541765 YP_001434300.1 CDS Rcas_4255 NC_009767.1 5496935 5498338 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rrs:RoseRS_0005 ferredoxin--NADP(+) reductase; ferredoxin--NADP(+) reductase 5496935..5498338 Roseiflexus castenholzii DSM 13941 5541766 YP_001434301.1 CDS Rcas_4256 NC_009767.1 5498316 5498615 R KEGG: rrs:RoseRS_0556 hypothetical protein; hypothetical protein complement(5498316..5498615) Roseiflexus castenholzii DSM 13941 5541767 YP_001434302.1 CDS Rcas_4257 NC_009767.1 5498792 5499223 D hypothetical protein 5498792..5499223 Roseiflexus castenholzii DSM 13941 5541768 YP_001434303.1 CDS Rcas_4258 NC_009767.1 5499337 5501070 R PFAM: Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: rrs:RoseRS_0555 ferrous iron transport protein B domain protein; ferrous iron transport B domain-containing protein complement(5499337..5501070) Roseiflexus castenholzii DSM 13941 5541769 YP_001434304.1 CDS Rcas_4259 NC_009767.1 5501070 5501600 R TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: rrs:RoseRS_0554 small GTP-binding protein; small GTP-binding protein complement(5501070..5501600) Roseiflexus castenholzii DSM 13941 5541770 YP_001434305.1 CDS Rcas_4260 NC_009767.1 5501600 5501851 R PFAM: FeoA family protein; KEGG: rrs:RoseRS_0553 FeoA family protein; FeoA family protein complement(5501600..5501851) Roseiflexus castenholzii DSM 13941 5541771 YP_001434306.1 CDS Rcas_4261 NC_009767.1 5501838 5502092 R PFAM: FeoA family protein; KEGG: rrs:RoseRS_0552 FeoA family protein; FeoA family protein complement(5501838..5502092) Roseiflexus castenholzii DSM 13941 5541772 YP_001434307.1 CDS Rcas_4262 NC_009767.1 5502508 5503695 R PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0168 aminotransferase, class V; class V aminotransferase complement(5502508..5503695) Roseiflexus castenholzii DSM 13941 5541773 YP_001434308.1 CDS Rcas_4263 NC_009767.1 5503688 5504467 R KEGG: rrs:RoseRS_0169 cobalt ABC transporter, ATPase subunit; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; cobalt ABC transporter ATPase complement(5503688..5504467) Roseiflexus castenholzii DSM 13941 5541774 YP_001434309.1 CDS Rcas_4264 NC_009767.1 5505003 5505209 D TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rrs:RoseRS_3576 twin-arginine translocation protein, TatA/E family subunit; twin arginine-targeting protein translocase 5505003..5505209 Roseiflexus castenholzii DSM 13941 5541775 YP_001434310.1 CDS Rcas_4265 NC_009767.1 5505288 5506652 D TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: rrs:RoseRS_3577 GTP1/OBG sub domain protein; GTP-binding protein Obg/CgtA 5505288..5506652 Roseiflexus castenholzii DSM 13941 5541776 YP_001434311.1 CDS Rcas_4266 NC_009767.1 5506695 5508233 D PFAM: sugar transferase; KEGG: rrs:RoseRS_3578 UDP-phosphate galactose phosphotransferase; UDP-phosphate galactose phosphotransferase 5506695..5508233 Roseiflexus castenholzii DSM 13941 5541777 YP_001434312.1 CDS Rcas_4267 NC_009767.1 5508468 5509421 D PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3579 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5508468..5509421 Roseiflexus castenholzii DSM 13941 5541778 YP_001434313.1 CDS Rcas_4268 NC_009767.1 5509423 5510934 D PFAM: O-antigen polymerase; KEGG: rrs:RoseRS_3580 O-antigen polymerase; O-antigen polymerase 5509423..5510934 Roseiflexus castenholzii DSM 13941 5541779 YP_001434314.1 CDS Rcas_4269 NC_009767.1 5510919 5511872 D PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rrs:RoseRS_3581 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 5510919..5511872 Roseiflexus castenholzii DSM 13941 5541780 YP_001434315.1 CDS Rcas_4270 NC_009767.1 5511934 5513046 D PFAM: conserved hypothetical protein; KEGG: rrs:RoseRS_3582 conserved hypothetical protein 374; hypothetical protein 5511934..5513046 Roseiflexus castenholzii DSM 13941 5541781 YP_001434316.1 CDS Rcas_4271 NC_009767.1 5513061 5514263 D PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3583 glycosyl transferase, group 1; group 1 glycosyl transferase 5513061..5514263 Roseiflexus castenholzii DSM 13941 5541782 YP_001434317.1 CDS Rcas_4272 NC_009767.1 5514235 5514864 D KEGG: rrs:RoseRS_3584 hypothetical protein; hypothetical protein 5514235..5514864 Roseiflexus castenholzii DSM 13941 5541783 YP_001434318.1 CDS Rcas_4273 NC_009767.1 5514957 5516561 D PFAM: carbohydrate kinase FGGY; KEGG: rrs:RoseRS_3585 carbohydrate kinase, FGGY; carbohydrate kinase FGGY 5514957..5516561 Roseiflexus castenholzii DSM 13941 5541784 YP_001434319.1 CDS Rcas_4274 NC_009767.1 5516534 5517172 R PFAM: Tetratricopeptide TPR_4; KEGG: hypothetical protein; hypothetical protein complement(5516534..5517172) Roseiflexus castenholzii DSM 13941 5541785 YP_001434320.1 CDS Rcas_4275 NC_009767.1 5517169 5518233 R TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: rrs:RoseRS_3588 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' complement(5517169..5518233) Roseiflexus castenholzii DSM 13941 5541786 YP_001434321.1 CDS Rcas_4276 NC_009767.1 5518311 5518697 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_3589 response regulator receiver protein; response regulator receiver protein 5518311..5518697 Roseiflexus castenholzii DSM 13941 5541787 YP_001434322.1 CDS Rcas_4277 NC_009767.1 5518731 5520161 R PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_3590 beta-ketoacyl synthase; beta-ketoacyl synthase complement(5518731..5520161) Roseiflexus castenholzii DSM 13941 5541788 YP_001434323.1 CDS Rcas_4278 NC_009767.1 5520204 5521124 R KEGG: rrs:RoseRS_3591 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase complement(5520204..5521124) Roseiflexus castenholzii DSM 13941 5541789 YP_001434324.1 CDS Rcas_4279 NC_009767.1 5521528 5521893 D KEGG: rrs:RoseRS_3592 hypothetical protein; hypothetical protein 5521528..5521893 Roseiflexus castenholzii DSM 13941 5541790 YP_001434325.1 CDS Rcas_4280 NC_009767.1 5521903 5523033 R PFAM: phospholipase D/Transphosphatidylase; KEGG: rrs:RoseRS_3593 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase complement(5521903..5523033) Roseiflexus castenholzii DSM 13941 5541791 YP_001434326.1 CDS Rcas_4281 NC_009767.1 5523152 5524408 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3594 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5523152..5524408) Roseiflexus castenholzii DSM 13941 5541792 YP_001434327.1 CDS Rcas_4282 NC_009767.1 5524417 5524857 R PFAM: diacylglycerol kinase; KEGG: rrs:RoseRS_3595 diacylglycerol kinase; diacylglycerol kinase complement(5524417..5524857) Roseiflexus castenholzii DSM 13941 5541793 YP_001434328.1 CDS Rcas_4283 NC_009767.1 5524917 5525396 R PFAM: protein of unknown function UPF0054; KEGG: rrs:RoseRS_3596 protein of unknown function UPF0054; hypothetical protein complement(5524917..5525396) Roseiflexus castenholzii DSM 13941 5541794 YP_001434329.1 CDS Rcas_4284 NC_009767.1 5525423 5527609 R KEGG: rrs:RoseRS_3597 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(5525423..5527609) Roseiflexus castenholzii DSM 13941 5541795 YP_001434330.1 CDS Rcas_4285 NC_009767.1 5527643 5528164 R KEGG: rrs:RoseRS_3598 GatB/YqeY domain protein; GatB/YqeY domain-containing protein complement(5527643..5528164) Roseiflexus castenholzii DSM 13941 5541796 YP_001434331.1 CDS gmk NC_009767.1 5528196 5528828 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(5528196..5528828) Roseiflexus castenholzii DSM 13941 5541797 YP_001434332.1 CDS Rcas_4287 NC_009767.1 5528871 5530622 D PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: rrs:RoseRS_3600 fibronectin-binding A domain protein; fibronectin-binding A domain-containing protein 5528871..5530622 Roseiflexus castenholzii DSM 13941 5541798 YP_001434333.1 CDS Rcas_4288 NC_009767.1 5530704 5530934 R KEGG: rrs:RoseRS_3601 hypothetical protein; hypothetical protein complement(5530704..5530934) Roseiflexus castenholzii DSM 13941 5541799 YP_001434334.1 CDS Rcas_4289 NC_009767.1 5531320 5531583 D KEGG: rrs:RoseRS_3602 hypothetical protein; hypothetical protein 5531320..5531583 Roseiflexus castenholzii DSM 13941 5541800 YP_001434335.1 CDS Rcas_4290 NC_009767.1 5531604 5533379 D TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: rrs:RoseRS_3603 acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 5531604..5533379 Roseiflexus castenholzii DSM 13941 5541801 YP_001434336.1 CDS Rcas_4291 NC_009767.1 5533395 5534282 D PFAM: dihydrodipicolinate synthetase; KEGG: rrs:RoseRS_3604 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 5533395..5534282 Roseiflexus castenholzii DSM 13941 5541802 YP_001434337.1 CDS Rcas_4293 NC_009767.1 5535489 5537108 D KEGG: rrs:RoseRS_1243 hypothetical protein; hypothetical protein 5535489..5537108 Roseiflexus castenholzii DSM 13941 5541804 YP_001434338.1 CDS Rcas_4294 NC_009767.1 5537644 5538861 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3605 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5537644..5538861) Roseiflexus castenholzii DSM 13941 5541805 YP_001434339.1 CDS Rcas_4295 NC_009767.1 5538882 5539652 R PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3606 haloacid dehalogenase domain protein hydrolase; hydrolase complement(5538882..5539652) Roseiflexus castenholzii DSM 13941 5541806 YP_001434340.1 CDS Rcas_4296 NC_009767.1 5541065 5542390 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rrs:RoseRS_3607 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein complement(5541065..5542390) Roseiflexus castenholzii DSM 13941 5541807 YP_001434341.1 CDS Rcas_4297 NC_009767.1 5542796 5544706 D PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: mxa:MXAN_3847 transporter; TrkA domain-containing protein 5542796..5544706 Roseiflexus castenholzii DSM 13941 5541808 YP_001434342.1 CDS Rcas_4298 NC_009767.1 5544837 5545520 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_3608 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(5544837..5545520) Roseiflexus castenholzii DSM 13941 5541809 YP_001434343.1 CDS Rcas_4299 NC_009767.1 5546101 5547174 D PFAM: sodium/calcium exchanger membrane region; KEGG: rrs:RoseRS_3609 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane region 5546101..5547174 Roseiflexus castenholzii DSM 13941 5541810 YP_001434344.1 CDS Rcas_4300 NC_009767.1 5547415 5548524 D TIGRFAM: phosphate binding protein; KEGG: rrs:RoseRS_3610 phosphate binding protein; phosphate binding protein 5547415..5548524 Roseiflexus castenholzii DSM 13941 5541811 YP_001434345.1 CDS Rcas_4301 NC_009767.1 5548521 5550260 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3611 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 5548521..5550260 Roseiflexus castenholzii DSM 13941 5541812 YP_001434346.1 CDS Rcas_4302 NC_009767.1 5550274 5550648 D PFAM: response regulator receiver; KEGG: rrs:RoseRS_3612 response regulator receiver protein; response regulator receiver protein 5550274..5550648 Roseiflexus castenholzii DSM 13941 5541813 YP_001434347.1 CDS Rcas_4303 NC_009767.1 5550822 5552360 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: rrs:RoseRS_0222 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 5550822..5552360 Roseiflexus castenholzii DSM 13941 5541814 YP_001434348.1 CDS Rcas_4304 NC_009767.1 5552513 5554120 D TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: rrs:RoseRS_0224 protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 5552513..5554120 Roseiflexus castenholzii DSM 13941 5541815 YP_001434349.1 CDS Rcas_4305 NC_009767.1 5554341 5555879 D PFAM: sulfatase; KEGG: rrs:RoseRS_3340 sulfatase; sulfatase 5554341..5555879 Roseiflexus castenholzii DSM 13941 5541816 YP_001434350.1 CDS Rcas_4306 NC_009767.1 5555888 5556760 D PFAM: prolipoprotein diacylglyceryl transferase; KEGG: rrs:RoseRS_3339 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 5555888..5556760 Roseiflexus castenholzii DSM 13941 5541817 YP_001434351.1 CDS Rcas_4307 NC_009767.1 5556845 5558251 D PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: rrs:RoseRS_3337 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 5556845..5558251 Roseiflexus castenholzii DSM 13941 5541818 YP_001434352.1 CDS Rcas_4308 NC_009767.1 5558266 5559975 D in Rhizobium meliloti this protein is involved in the synthesis of nodulation factors that are active on the roots of alfalfa; catalyzes formation of activated sulfate intermediate; converts ATP and sulfate to diphosphate and adenylylsulfate and then ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; the activated intermediate is transferred to the nodulation factors by NodH; may interact with NodP and NodQ; similar to the CysD and CysN proteins from Escherichia coli involved in cysteine biosynthesis; bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase 5558266..5559975 Roseiflexus castenholzii DSM 13941 5541819 YP_001434353.1 CDS Rcas_4309 NC_009767.1 5561179 5562081 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_3335 PHP C-terminal domain protein; phosphotransferase domain-containing protein 5561179..5562081 Roseiflexus castenholzii DSM 13941 5541820 YP_001434354.1 CDS miaA NC_009767.1 5562089 5563009 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 5562089..5563009 Roseiflexus castenholzii DSM 13941 5541821 YP_001434355.1 CDS Rcas_4312 NC_009767.1 5563469 5563960 R KEGG: rrs:RoseRS_4066 hypothetical protein; hypothetical protein complement(5563469..5563960) Roseiflexus castenholzii DSM 13941 5541823 YP_001434356.1 CDS Rcas_4313 NC_009767.1 5563964 5565187 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3333 major facilitator superfamily MFS_1; major facilitator transporter complement(5563964..5565187) Roseiflexus castenholzii DSM 13941 5541824 YP_001434357.1 CDS Rcas_4314 NC_009767.1 5565199 5566311 R PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_3332 glycosyl transferase, group 1; group 1 glycosyl transferase complement(5565199..5566311) Roseiflexus castenholzii DSM 13941 5541825 YP_001434358.1 CDS Rcas_4315 NC_009767.1 5566412 5567617 D TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; KEGG: rrs:RoseRS_3331 cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 5566412..5567617 Roseiflexus castenholzii DSM 13941 5541826 YP_001434359.1 CDS rplL NC_009767.1 5568428 5568850 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(5568428..5568850) Roseiflexus castenholzii DSM 13941 5541828 YP_001434360.1 CDS rplJ NC_009767.1 5568930 5569493 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(5568930..5569493) Roseiflexus castenholzii DSM 13941 5541829 YP_001434361.1 CDS rplA NC_009767.1 5569715 5570437 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(5569715..5570437) Roseiflexus castenholzii DSM 13941 5541830 YP_001434362.1 CDS rplK NC_009767.1 5570488 5570913 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(5570488..5570913) Roseiflexus castenholzii DSM 13941 5541831 YP_001434363.1 CDS Rcas_4321 NC_009767.1 5570933 5571517 R KEGG: rrs:RoseRS_3325 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protein; NusG antitermination factor complement(5570933..5571517) Roseiflexus castenholzii DSM 13941 5541832 YP_001434364.1 CDS Rcas_4322 NC_009767.1 5571541 5571795 R TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: rrs:RoseRS_3324 preprotein translocase, SecE subunit; preprotein translocase subunit SecE complement(5571541..5571795) Roseiflexus castenholzii DSM 13941 5541833 YP_001434365.1 CDS Rcas_4323 NC_009767.1 5571911 5573116 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(5571911..5573116) Roseiflexus castenholzii DSM 13941 5541834 YP_001434366.1 CDS Rcas_4324 NC_009767.1 5573471 5574496 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rrs:RoseRS_0216 glyoxylate reductase; glyoxylate reductase complement(5573471..5574496) Roseiflexus castenholzii DSM 13941 5541837 YP_001434367.1 CDS Rcas_4325 NC_009767.1 5574447 5575061 R KEGG: rrs:RoseRS_0215 hypothetical protein; hypothetical protein complement(5574447..5575061) Roseiflexus castenholzii DSM 13941 5541838 YP_001434368.1 CDS Rcas_4326 NC_009767.1 5575146 5576837 D KEGG: rrs:RoseRS_0214 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; methylmalonyl-CoA mutase large subunit 5575146..5576837 Roseiflexus castenholzii DSM 13941 5541839 YP_001434369.1 CDS Rcas_4327 NC_009767.1 5577109 5580174 D PFAM: regulatory protein LuxR; KEGG: rrs:RoseRS_2963 regulatory protein, LuxR; ATP-dependent transcription regulator LuxR 5577109..5580174 Roseiflexus castenholzii DSM 13941 5541840 YP_001434370.1 CDS Rcas_4328 NC_009767.1 5580887 5582179 D PFAM: major facilitator superfamily MFS_1; KEGG: bfs:BF2379 membrane protein; major facilitator transporter 5580887..5582179 Roseiflexus castenholzii DSM 13941 5541841 YP_001434371.1 CDS Rcas_4329 NC_009767.1 5582490 5583656 D KEGG: rrs:RoseRS_0213 hypothetical protein; hypothetical protein 5582490..5583656 Roseiflexus castenholzii DSM 13941 5541842 YP_001434372.1 CDS Rcas_4330 NC_009767.1 5583659 5584945 D adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 5583659..5584945 Roseiflexus castenholzii DSM 13941 5541843 YP_001434373.1 CDS Rcas_4331 NC_009767.1 5584946 5585401 R KEGG: rrs:RoseRS_0211 hypothetical protein; hypothetical protein complement(5584946..5585401) Roseiflexus castenholzii DSM 13941 5541844 YP_001434374.1 CDS Rcas_4332 NC_009767.1 5585470 5585829 D KEGG: rrs:RoseRS_0210 hypothetical protein; hypothetical protein 5585470..5585829 Roseiflexus castenholzii DSM 13941 5541845 YP_001434375.1 CDS Rcas_4333 NC_009767.1 5586444 5586746 D KEGG: rrs:RoseRS_0209 hypothetical protein; hypothetical protein 5586444..5586746 Roseiflexus castenholzii DSM 13941 5541846 YP_001434376.1 CDS Rcas_4334 NC_009767.1 5586757 5588034 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_0208 histidine kinase; histidine kinase complement(5586757..5588034) Roseiflexus castenholzii DSM 13941 5541847 YP_001434377.1 CDS Rcas_4335 NC_009767.1 5588040 5588651 R PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: rrs:RoseRS_0207 phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(5588040..5588651) Roseiflexus castenholzii DSM 13941 5541848 YP_001434378.1 CDS purH NC_009767.1 5588663 5590180 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(5588663..5590180) Roseiflexus castenholzii DSM 13941 5541849 YP_001434379.1 CDS Rcas_4337 NC_009767.1 5590165 5590473 R hypothetical protein complement(5590165..5590473) Roseiflexus castenholzii DSM 13941 5541850 YP_001434380.1 CDS Rcas_4338 NC_009767.1 5590595 5591398 R KEGG: rrs:RoseRS_0201 hypothetical protein; hypothetical protein complement(5590595..5591398) Roseiflexus castenholzii DSM 13941 5541851 YP_001434381.1 CDS Rcas_4339 NC_009767.1 5591458 5592033 R KEGG: rrs:RoseRS_0200 hypothetical protein; hypothetical protein complement(5591458..5592033) Roseiflexus castenholzii DSM 13941 5541852 YP_001434382.1 CDS Rcas_4340 NC_009767.1 5592096 5592635 R PFAM: Roadblock/LC7 family protein; KEGG: rrs:RoseRS_0199 roadblock/LC7 family protein; roadblock/LC7 family protein complement(5592096..5592635) Roseiflexus castenholzii DSM 13941 5541853 YP_001434383.1 CDS Rcas_4341 NC_009767.1 5593136 5593420 R KEGG: rrs:RoseRS_0198 hypothetical protein; hypothetical protein complement(5593136..5593420) Roseiflexus castenholzii DSM 13941 5541854 YP_001434384.1 CDS Rcas_4342 NC_009767.1 5593742 5594185 R PFAM: heat shock protein Hsp20; KEGG: rrs:RoseRS_0197 heat shock protein HSP20; heat shock protein Hsp20 complement(5593742..5594185) Roseiflexus castenholzii DSM 13941 5541855 YP_001434385.1 CDS Rcas_4343 NC_009767.1 5594309 5595979 D KEGG: rrs:RoseRS_0196 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 5594309..5595979 Roseiflexus castenholzii DSM 13941 5541856 YP_001434386.1 CDS Rcas_4344 NC_009767.1 5595993 5596712 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0195 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5595993..5596712 Roseiflexus castenholzii DSM 13941 5541857 YP_001434387.1 CDS Rcas_4345 NC_009767.1 5597810 5598574 R PFAM: chromosome segregation and condensation protein ScpA; KEGG: rrs:RoseRS_0194 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA complement(5597810..5598574) Roseiflexus castenholzii DSM 13941 5541858 YP_001434388.1 CDS Rcas_4346 NC_009767.1 5598581 5599096 R KEGG: rrs:RoseRS_0193 hypothetical protein; hypothetical protein complement(5598581..5599096) Roseiflexus castenholzii DSM 13941 5541859 YP_001434389.1 CDS Rcas_4347 NC_009767.1 5599127 5599408 R PFAM: transcriptional coactivator/pterin dehydratase; KEGG: rrs:RoseRS_0192 transcriptional coactivator/pterin dehydratase; transcriptional coactivator/pterin dehydratase complement(5599127..5599408) Roseiflexus castenholzii DSM 13941 5541860 YP_001434390.1 CDS Rcas_4348 NC_009767.1 5599697 5600896 R TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: rrs:RoseRS_0191 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor complement(5599697..5600896) Roseiflexus castenholzii DSM 13941 5541861 YP_001434391.1 CDS pyrF NC_009767.1 5601311 5602129 D type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 5601311..5602129 Roseiflexus castenholzii DSM 13941 5541862 YP_001434392.1 CDS smpB NC_009767.1 5602175 5602651 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 5602175..5602651 Roseiflexus castenholzii DSM 13941 5541863 YP_001434393.1 CDS Rcas_4351 NC_009767.1 5602657 5603394 R PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0188 two component transcriptional regulator, winged helix family; two component transcriptional regulator complement(5602657..5603394) Roseiflexus castenholzii DSM 13941 5541864 YP_001434394.1 CDS Rcas_4352 NC_009767.1 5603587 5604795 D PFAM: ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: rrs:RoseRS_0187 ATPase AAA-2 domain protein; ATPase 5603587..5604795 Roseiflexus castenholzii DSM 13941 5541865 YP_001434395.1 CDS Rcas_4353 NC_009767.1 5605418 5605801 D KEGG: bfs:BF0554 hypothetical protein; hypothetical protein 5605418..5605801 Roseiflexus castenholzii DSM 13941 5541866 YP_001434396.1 CDS Rcas_4354 NC_009767.1 5606188 5606880 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_0180 ABC transporter related; ABC transporter-like protein complement(5606188..5606880) Roseiflexus castenholzii DSM 13941 5541867 YP_001434397.1 CDS Rcas_4355 NC_009767.1 5606899 5607888 R KEGG: rrs:RoseRS_0179 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: ABC transporter related; SpoVT/AbrB domain protein; SMART: AAA ATPase; AbrB family transcriptional regulator complement(5606899..5607888) Roseiflexus castenholzii DSM 13941 5541868 YP_001434398.1 CDS Rcas_4356 NC_009767.1 5607920 5610841 R PFAM: protein of unknown function DUF214; KEGG: rrs:RoseRS_0178 protein of unknown function DUF214; hypothetical protein complement(5607920..5610841) Roseiflexus castenholzii DSM 13941 5541869 YP_001434399.1 CDS Rcas_4357 NC_009767.1 5611043 5612587 R PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: rrs:RoseRS_0177 secretion protein HlyD family protein; H+transporting two-sector ATPase delta/subunit epsilon complement(5611043..5612587) Roseiflexus castenholzii DSM 13941 5541870 YP_001434400.1 CDS Rcas_4358 NC_009767.1 5612649 5613929 R PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_0176 major facilitator superfamily MFS_1; major facilitator transporter complement(5612649..5613929) Roseiflexus castenholzii DSM 13941 5541871 YP_001434401.1 CDS Rcas_4359 NC_009767.1 5614128 5615093 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rrs:RoseRS_0175 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 5614128..5615093 Roseiflexus castenholzii DSM 13941 5541872 YP_001434402.1 CDS Rcas_4360 NC_009767.1 5615486 5616472 D PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: rrs:RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 5615486..5616472 Roseiflexus castenholzii DSM 13941 5541873 YP_001434403.1 CDS Rcas_4361 NC_009767.1 5616477 5617286 D TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: rrs:RoseRS_0170 cobalt ABC transporter, inner membrane subunit CbiQ; cobalt ABC transporter inner membrane subunit CbiQ 5616477..5617286 Roseiflexus castenholzii DSM 13941 5541874 YP_001434404.1 CDS Rcas_4362 NC_009767.1 5617680 5618876 D PFAM: cytochrome P450; KEGG: rrs:RoseRS_0765 cytochrome P450; cytochrome P450 5617680..5618876 Roseiflexus castenholzii DSM 13941 5541875 YP_001434405.1 CDS Rcas_4363 NC_009767.1 5618873 5619583 R PFAM: iron dependent repressor; KEGG: rrs:RoseRS_3574 iron dependent repressor; DtxR family iron dependent repressor complement(5618873..5619583) Roseiflexus castenholzii DSM 13941 5541876 YP_001434406.1 CDS Rcas_4364 NC_009767.1 5619846 5620379 R KEGG: rrs:RoseRS_3573 hypothetical protein; hypothetical protein complement(5619846..5620379) Roseiflexus castenholzii DSM 13941 5541877 YP_001434407.1 CDS Rcas_4365 NC_009767.1 5620376 5620792 R KEGG: rrs:RoseRS_3572 hypothetical protein; hypothetical protein complement(5620376..5620792) Roseiflexus castenholzii DSM 13941 5541878 YP_001434408.1 CDS Rcas_4366 NC_009767.1 5621157 5622137 R PFAM: transport system permease; KEGG: rrs:RoseRS_3571 transport system permease; transport system permease complement(5621157..5622137) Roseiflexus castenholzii DSM 13941 5541879 YP_001434409.1 CDS Rcas_4367 NC_009767.1 5622258 5622617 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rrs:RoseRS_3570 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(5622258..5622617) Roseiflexus castenholzii DSM 13941 5541880 YP_001434410.1 CDS Rcas_4368 NC_009767.1 5622650 5622961 R KEGG: rrs:RoseRS_3569 hypothetical protein; hypothetical protein complement(5622650..5622961) Roseiflexus castenholzii DSM 13941 5541881 YP_001434411.1 CDS Rcas_4369 NC_009767.1 5622958 5623923 R PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_3568 cytochrome c assembly protein; cytochrome c assembly protein complement(5622958..5623923) Roseiflexus castenholzii DSM 13941 5541882 YP_001434412.1 CDS Rcas_4370 NC_009767.1 5624091 5624474 R KEGG: rrs:RoseRS_3567 hypothetical protein; hypothetical protein complement(5624091..5624474) Roseiflexus castenholzii DSM 13941 5541883 YP_001434413.1 CDS Rcas_4371 NC_009767.1 5624492 5625568 R PFAM: transport system permease; KEGG: rrs:RoseRS_3566 transport system permease; transport system permease complement(5624492..5625568) Roseiflexus castenholzii DSM 13941 5541884 YP_001434414.1 CDS Rcas_4372 NC_009767.1 5625565 5626653 R PFAM: periplasmic binding protein; KEGG: rrs:RoseRS_3565 periplasmic binding protein; periplasmic binding protein complement(5625565..5626653) Roseiflexus castenholzii DSM 13941 5541885 YP_001434415.1 CDS Rcas_4373 NC_009767.1 5626634 5627449 R PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3564 ABC transporter related; ABC transporter-like protein complement(5626634..5627449) Roseiflexus castenholzii DSM 13941 5541886 YP_001434416.1 CDS Rcas_4374 NC_009767.1 5627847 5628515 R PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3837 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(5627847..5628515) Roseiflexus castenholzii DSM 13941 5541887 YP_001434417.1 CDS Rcas_4375 NC_009767.1 5628515 5629801 R TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: rrs:RoseRS_4164 isocitrate lyase; isocitrate lyase complement(5628515..5629801) Roseiflexus castenholzii DSM 13941 5541888 YP_001434418.1 CDS Rcas_4376 NC_009767.1 5629822 5631393 R Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase complement(5629822..5631393) Roseiflexus castenholzii DSM 13941 5541889 YP_001434419.1 CDS Rcas_4381 NC_009767.1 5634450 5634866 D PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: ana:alr4952 hypothetical protein; twitching motility protein PilT 5634450..5634866 Roseiflexus castenholzii DSM 13941 5541894 YP_001434420.1 CDS Rcas_4382 NC_009767.1 5634987 5635214 D KEGG: rrs:RoseRS_2013 hypothetical protein; hypothetical protein 5634987..5635214 Roseiflexus castenholzii DSM 13941 5541895 YP_001434421.1 CDS Rcas_4385 NC_009767.1 5636811 5637677 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rrs:RoseRS_4019 formate dehydrogenase family accessory protein FdhD; formate dehydrogenase family accessory protein FdhD complement(5636811..5637677) Roseiflexus castenholzii DSM 13941 5541898 YP_001434422.1 CDS Rcas_4386 NC_009767.1 5637822 5640050 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rrs:RoseRS_4018 oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(5637822..5640050) Roseiflexus castenholzii DSM 13941 5541899 YP_001434423.1 CDS Rcas_4387 NC_009767.1 5640513 5640881 R PFAM: protein of unknown function DUF45; KEGG: rrs:RoseRS_2686 protein of unknown function DUF45; hypothetical protein complement(5640513..5640881) Roseiflexus castenholzii DSM 13941 5541900 YP_001434424.1 CDS Rcas_4388 NC_009767.1 5640878 5641039 R KEGG: rrs:RoseRS_2687 type I site-specific deoxyribonuclease, HsdR family; HsdR family type I site-specific deoxyribonuclease complement(5640878..5641039) Roseiflexus castenholzii DSM 13941 5541901 YP_001434425.1 CDS Rcas_4389 NC_009767.1 5641245 5642426 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rrs:RoseRS_3729 radical SAM domain protein; radical SAM domain-containing protein 5641245..5642426 Roseiflexus castenholzii DSM 13941 5541902 YP_001434426.1 CDS Rcas_4390 NC_009767.1 5642910 5643989 D TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: rrs:RoseRS_3462 heat-inducible transcription repressor HrcA; heat-inducible transcription repressor HrcA 5642910..5643989 Roseiflexus castenholzii DSM 13941 5541903 YP_001434427.1 CDS Rcas_4391 NC_009767.1 5644020 5644634 D PFAM: GrpE protein; KEGG: rrs:RoseRS_3461 GrpE protein; heat shock protein GrpE 5644020..5644634 Roseiflexus castenholzii DSM 13941 5541904 YP_001434428.1 CDS Rcas_4392 NC_009767.1 5644627 5646474 D KEGG: rrs:RoseRS_3460 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; molecular chaperone DnaK 5644627..5646474 Roseiflexus castenholzii DSM 13941 5541905 YP_001434429.1 CDS Rcas_4393 NC_009767.1 5646494 5647606 D TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: rrs:RoseRS_3459 chaperone protein DnaJ; chaperone protein DnaJ 5646494..5647606 Roseiflexus castenholzii DSM 13941 5541906 YP_001434430.1 CDS Rcas_4394 NC_009767.1 5647624 5648370 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rrs:RoseRS_3458 RNA methyltransferase, TrmH family, group 3; RNA methyltransferase 5647624..5648370 Roseiflexus castenholzii DSM 13941 5541907 YP_001434431.1 CDS Rcas_4395 NC_009767.1 5648346 5648711 D KEGG: rrs:RoseRS_3457 DNA polymerase, beta domain protein region; hypothetical protein 5648346..5648711 Roseiflexus castenholzii DSM 13941 5541908 YP_001434432.1 CDS Rcas_4396 NC_009767.1 5648846 5649802 R TIGRFAM: integron integrase; PFAM: integrase family protein; KEGG: mfa:Mfla_0410 integron integrase; integron integrase complement(5648846..5649802) Roseiflexus castenholzii DSM 13941 5541909 YP_001434433.1 CDS Rcas_4397 NC_009767.1 5650058 5651485 D KEGG: rrs:RoseRS_2284 hypothetical protein; hypothetical protein 5650058..5651485 Roseiflexus castenholzii DSM 13941 5541910 YP_001434434.1 CDS Rcas_4398 NC_009767.1 5651490 5652284 D KEGG: xoo:XOO0608 endonuclease; endonuclease 5651490..5652284 Roseiflexus castenholzii DSM 13941 5541911 YP_001434435.1 CDS Rcas_4399 NC_009767.1 5652461 5653153 D hypothetical protein 5652461..5653153 Roseiflexus castenholzii DSM 13941 5541912 YP_001434436.1 CDS Rcas_4400 NC_009767.1 5653360 5653629 D KEGG: sma:SAV4429 hypothetical protein; hypothetical protein 5653360..5653629 Roseiflexus castenholzii DSM 13941 5541913 YP_001434437.1 CDS Rcas_4403 NC_009767.1 5654413 5655054 D TIGRFAM: metal dependent phophohydrolase; KEGG: rrs:RoseRS_3456 metal dependent phophohydrolase; metal dependent phophohydrolase 5654413..5655054 Roseiflexus castenholzii DSM 13941 5541916 YP_001434438.1 CDS Rcas_4404 NC_009767.1 5655326 5656294 R PFAM: PfkB domain protein; KEGG: rrs:RoseRS_3455 PfkB domain protein; ribokinase-like domain-containing protein complement(5655326..5656294) Roseiflexus castenholzii DSM 13941 5541917 YP_001434439.1 CDS Rcas_4405 NC_009767.1 5656302 5657411 R PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; KEGG: rrs:RoseRS_3454 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(5656302..5657411) Roseiflexus castenholzii DSM 13941 5541918 YP_001434440.1 CDS Rcas_4406 NC_009767.1 5657871 5658524 R KEGG: rrs:RoseRS_3453 hypothetical protein; hypothetical protein complement(5657871..5658524) Roseiflexus castenholzii DSM 13941 5541919 YP_001434441.1 CDS Rcas_4407 NC_009767.1 5658915 5659508 D KEGG: rrs:RoseRS_3452 signal transduction histidine kinase, LytS; signal transduction histidine kinase, LytS 5658915..5659508 Roseiflexus castenholzii DSM 13941 5541920 YP_001434442.1 CDS Rcas_4408 NC_009767.1 5659522 5660304 D PFAM: cobalt transport protein; KEGG: rrs:RoseRS_3451 cobalt transport protein; cobalt transport protein 5659522..5660304 Roseiflexus castenholzii DSM 13941 5541921 YP_001434443.1 CDS Rcas_4409 NC_009767.1 5660362 5662068 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_3450 ABC transporter related; ABC transporter-like protein 5660362..5662068 Roseiflexus castenholzii DSM 13941 5541922 YP_001434444.1 CDS Rcas_4410 NC_009767.1 5662150 5663232 D PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3449 tetratricopeptide TPR_2 repeat protein; hypothetical protein 5662150..5663232 Roseiflexus castenholzii DSM 13941 5541923 YP_001434445.1 CDS Rcas_4411 NC_009767.1 5663229 5664692 D PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: rrs:RoseRS_3446 deoxyribodipyrimidine photo-lyase; deoxyribodipyrimidine photo-lyase 5663229..5664692 Roseiflexus castenholzii DSM 13941 5541924 YP_001434446.1 CDS Rcas_4412 NC_009767.1 5665141 5667504 D PFAM: protein of unknown function DUF88; KEGG: rrs:RoseRS_3445 protein of unknown function DUF88; hypothetical protein 5665141..5667504 Roseiflexus castenholzii DSM 13941 5541925 YP_001434447.1 CDS Rcas_4413 NC_009767.1 5667527 5668165 D PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: rrs:RoseRS_3444 phosphoribosylanthranilate isomerase; phosphoribosylanthranilate isomerase 5667527..5668165 Roseiflexus castenholzii DSM 13941 5541926 YP_001434448.1 CDS Rcas_4414 NC_009767.1 5668170 5669552 D KEGG: rrs:RoseRS_3443 metallophosphoesterase; metallophosphoesterase 5668170..5669552 Roseiflexus castenholzii DSM 13941 5541927 YP_001434449.1 CDS Rcas_4415 NC_009767.1 5669719 5670084 D PFAM: protein of unknown function DUF343; KEGG: rrs:RoseRS_3442 protein of unknown function DUF343; hypothetical protein 5669719..5670084 Roseiflexus castenholzii DSM 13941 5541928 YP_001434450.1 CDS Rcas_4416 NC_009767.1 5670214 5670999 D PFAM: protein of unknown function DUF540; KEGG: rrs:RoseRS_3441 protein of unknown function DUF540; hypothetical protein 5670214..5670999 Roseiflexus castenholzii DSM 13941 5541929 YP_001434451.1 CDS Rcas_4417 NC_009767.1 5671757 5672803 D TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: rrs:RoseRS_3440 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 5671757..5672803 Roseiflexus castenholzii DSM 13941 5541930 YP_001434452.1 CDS Rcas_4418 NC_009767.1 5673061 5675346 D TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rrs:RoseRS_3439 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 5673061..5675346 Roseiflexus castenholzii DSM 13941 5541931 YP_001434453.1 CDS Rcas_4419 NC_009767.1 5676480 5679611 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: rrs:RoseRS_3438 excinuclease ABC, A subunit; excinuclease ABC subunit A complement(5676480..5679611) Roseiflexus castenholzii DSM 13941 5541932 YP_001434454.1 CDS Rcas_4420 NC_009767.1 5680114 5681841 D KEGG: swo:Swol_1757 hypothetical protein; hypothetical protein 5680114..5681841 Roseiflexus castenholzii DSM 13941 5541933 YP_001434455.1 CDS Rcas_4421 NC_009767.1 5682248 5683552 R PFAM: major facilitator superfamily MFS_1; KEGG: rrs:RoseRS_3435 major facilitator superfamily MFS_1; major facilitator transporter complement(5682248..5683552) Roseiflexus castenholzii DSM 13941 5541934 YP_001434456.1 CDS Rcas_4422 NC_009767.1 5684675 5685646 R PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_3434 pyridoxal 4-dehydrogenase; aldo/keto reductase complement(5684675..5685646) Roseiflexus castenholzii DSM 13941 5541935 YP_001434457.1 CDS Rcas_4423 NC_009767.1 5686364 5687617 R PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: rrs:RoseRS_0455 protein of unknown function DUF418; hypothetical protein complement(5686364..5687617) Roseiflexus castenholzii DSM 13941 5541936 YP_001434458.1 CDS Rcas_4424 NC_009767.1 5688342 5691509 D PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4327 transcriptional activator domain; transcriptional activator domain-containing protein 5688342..5691509 Roseiflexus castenholzii DSM 13941 5541937 YP_001434459.1 CDS Rcas_4425 NC_009767.1 5691650 5692216 D PFAM: YceI family protein; KEGG: rrs:RoseRS_4326 YceI family protein; hypothetical protein 5691650..5692216 Roseiflexus castenholzii DSM 13941 5541938 YP_001434460.1 CDS Rcas_4426 NC_009767.1 5692164 5694242 R PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rrs:RoseRS_4325 5-oxoprolinase (ATP-hydrolyzing); 5-oxoprolinase complement(5692164..5694242) Roseiflexus castenholzii DSM 13941 5541939 YP_001434461.1 CDS Rcas_4427 NC_009767.1 5694242 5696104 R KEGG: rrs:RoseRS_4324 hypothetical protein; hypothetical protein complement(5694242..5696104) Roseiflexus castenholzii DSM 13941 5541940 YP_001434462.1 CDS Rcas_4428 NC_009767.1 5696451 5697146 R PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Helix-turn-helix type 11 domain protein; Sigma-70 region 4 type 2; KEGG: rrs:RoseRS_4323 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(5696451..5697146) Roseiflexus castenholzii DSM 13941 5541941 YP_001434463.1 CDS Rcas_4429 NC_009767.1 5697498 5698790 R PFAM: extracellular solute-binding protein family 1; KEGG: rrs:RoseRS_0747 extracellular solute-binding protein, family 1; extracellular solute-binding protein complement(5697498..5698790) Roseiflexus castenholzii DSM 13941 5541942 YP_001434464.1 CDS Rcas_4430 NC_009767.1 5699048 5699974 R PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0748 asparaginase; asparaginase complement(5699048..5699974) Roseiflexus castenholzii DSM 13941 5541943 YP_001434465.1 CDS Rcas_4431 NC_009767.1 5699971 5700858 R PFAM: UbiE/COQ5 methyltransferase; Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_0749 methyltransferase type 11; type 11 methyltransferase complement(5699971..5700858) Roseiflexus castenholzii DSM 13941 5541944 YP_001434466.1 CDS Rcas_4432 NC_009767.1 5700842 5702101 R PFAM: Beta-ketoacyl synthase; KEGG: rrs:RoseRS_0750 beta-ketoacyl synthase; beta-ketoacyl synthase complement(5700842..5702101) Roseiflexus castenholzii DSM 13941 5541945 YP_001434467.1 CDS Rcas_4433 NC_009767.1 5702098 5702382 R hypothetical protein complement(5702098..5702382) Roseiflexus castenholzii DSM 13941 5541946 YP_001434468.1 CDS Rcas_4434 NC_009767.1 5702579 5703604 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rrs:RoseRS_0752 alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase complement(5702579..5703604) Roseiflexus castenholzii DSM 13941 5541947 YP_001434469.1 CDS Rcas_4435 NC_009767.1 5704362 5704988 D KEGG: rrs:RoseRS_0753 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; heme exporter protein CcmA 5704362..5704988 Roseiflexus castenholzii DSM 13941 5541948 YP_001434470.1 CDS Rcas_4436 NC_009767.1 5705050 5705796 D PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: rrs:RoseRS_0754 cytochrome c-type biogenesis protein CcmB; cytochrome c-type biogenesis protein CcmB 5705050..5705796 Roseiflexus castenholzii DSM 13941 5541949 YP_001434471.1 CDS Rcas_4437 NC_009767.1 5705854 5706861 D PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_0755 cytochrome c assembly protein; cytochrome c assembly protein 5705854..5706861 Roseiflexus castenholzii DSM 13941 5541950 YP_001434472.1 CDS Rcas_4438 NC_009767.1 5706845 5707075 D KEGG: rrs:RoseRS_0756 hypothetical protein; hypothetical protein 5706845..5707075 Roseiflexus castenholzii DSM 13941 5541951 YP_001434473.1 CDS Rcas_4439 NC_009767.1 5707100 5707522 D KEGG: rrs:RoseRS_0757 hypothetical protein; hypothetical protein 5707100..5707522 Roseiflexus castenholzii DSM 13941 5541952 YP_001434474.1 CDS Rcas_4440 NC_009767.1 5707668 5710031 D PFAM: cytochrome c assembly protein; KEGG: rrs:RoseRS_0758 cytochrome c assembly protein; cytochrome c assembly protein 5707668..5710031 Roseiflexus castenholzii DSM 13941 5541953 YP_001434475.1 CDS Rcas_4441 NC_009767.1 5710033 5710998 D PFAM: heat shock protein DnaJ domain protein; KEGG: rrs:RoseRS_0759 heat shock protein DnaJ domain protein; molecular chaperone DnaJ 5710033..5710998 Roseiflexus castenholzii DSM 13941 5541954 YP_001434476.1 CDS Rcas_4442 NC_009767.1 5711107 5711637 R PFAM: PilT protein domain protein; KEGG: sfu:Sfum_1407 PilT protein domain protein; twitching motility protein PilT complement(5711107..5711637) Roseiflexus castenholzii DSM 13941 5541955 YP_001434477.1 CDS Rcas_4443 NC_009767.1 5711634 5711852 R KEGG: sfu:Sfum_1406 prevent-host-death family protein; prevent-host-death family protein complement(5711634..5711852) Roseiflexus castenholzii DSM 13941 5541956 YP_001434478.1 CDS Rcas_4444 NC_009767.1 5712293 5712883 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rrs:RoseRS_0760 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 5712293..5712883 Roseiflexus castenholzii DSM 13941 5541957 YP_001434479.1 CDS Rcas_4445 NC_009767.1 5712968 5713657 D PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_0761 two component transcriptional regulator, winged helix family; two component transcriptional regulator 5712968..5713657 Roseiflexus castenholzii DSM 13941 5541958 YP_001434480.1 CDS Rcas_4446 NC_009767.1 5713675 5714856 D catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 5713675..5714856 Roseiflexus castenholzii DSM 13941 5541959 YP_001434481.1 CDS proA NC_009767.1 5714901 5716172 D Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 5714901..5716172 Roseiflexus castenholzii DSM 13941 5541960 YP_001434482.1 CDS Rcas_4448 NC_009767.1 5716197 5717003 R PFAM: dihydroorotate dehydrogenase; KEGG: rrs:RoseRS_0764 dihydroorotate dehydrogenase family protein; dihydroorotate dehydrogenase complement(5716197..5717003) Roseiflexus castenholzii DSM 13941 5541961 YP_001434483.1 CDS Rcas_4449 NC_009767.1 5717148 5718353 D PFAM: cytochrome P450; KEGG: rrs:RoseRS_0765 cytochrome P450; cytochrome P450 5717148..5718353 Roseiflexus castenholzii DSM 13941 5541962 YP_001434484.1 CDS Rcas_4450 NC_009767.1 5718373 5719275 R KEGG: rrs:RoseRS_0766 hypothetical protein; hypothetical protein complement(5718373..5719275) Roseiflexus castenholzii DSM 13941 5541963 YP_001434485.1 CDS Rcas_4451 NC_009767.1 5719492 5721435 D PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: rrs:RoseRS_4627 GAF sensor signal transduction histidine kinase; signal transduction histidine kinase 5719492..5721435 Roseiflexus castenholzii DSM 13941 5541964 YP_001434486.1 CDS Rcas_4452 NC_009767.1 5721435 5722556 D PFAM: creatinase; peptidase M24; KEGG: rrs:RoseRS_4628 peptidase M24; peptidase M24 5721435..5722556 Roseiflexus castenholzii DSM 13941 5541965 YP_001434487.1 CDS Rcas_4453 NC_009767.1 5722662 5723225 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rrs:RoseRS_4629 transcriptional regulator; segregation and condensation protein B 5722662..5723225 Roseiflexus castenholzii DSM 13941 5541966 Rcas_R0001 tRNA Rcas_R0001 NC_009767.1 41302 41378 D tRNA-Pro 41302..41378 Roseiflexus castenholzii DSM 13941 5537489 Rcas_R0002 tRNA Rcas_R0002 NC_009767.1 75981 76055 D tRNA-Gly 75981..76055 Roseiflexus castenholzii DSM 13941 5537519 Rcas_R0003 tRNA Rcas_R0003 NC_009767.1 133844 133920 D tRNA-Glu 133844..133920 Roseiflexus castenholzii DSM 13941 5537571 Rcas_R0004 tRNA Rcas_R0004 NC_009767.1 196893 196967 R tRNA-Thr complement(196893..196967) Roseiflexus castenholzii DSM 13941 5537622 Rcas_R0005 tRNA Rcas_R0005 NC_009767.1 258771 258844 R tRNA-Gly complement(258771..258844) Roseiflexus castenholzii DSM 13941 5537670 Rcas_R0006 tRNA Rcas_R0006 NC_009767.1 540627 540702 D tRNA-Arg 540627..540702 Roseiflexus castenholzii DSM 13941 5537889 Rcas_R0007 tRNA Rcas_R0007 NC_009767.1 872572 872647 R tRNA-Met complement(872572..872647) Roseiflexus castenholzii DSM 13941 5538125 Rcas_R0009 tRNA Rcas_R0009 NC_009767.1 962602 962675 D tRNA-Gln 962602..962675 Roseiflexus castenholzii DSM 13941 5538201 Rcas_R0010 tRNA Rcas_R0010 NC_009767.1 1572991 1573075 R tRNA-Leu complement(1572991..1573075) Roseiflexus castenholzii DSM 13941 5538684 Rcas_R0011 tRNA Rcas_R0011 NC_009767.1 1586291 1586366 R tRNA-Asp complement(1586291..1586366) Roseiflexus castenholzii DSM 13941 5538694 Rcas_R0012 tRNA Rcas_R0012 NC_009767.1 1586377 1586453 R tRNA-Glu complement(1586377..1586453) Roseiflexus castenholzii DSM 13941 5538695 Rcas_R0013 tRNA Rcas_R0013 NC_009767.1 1609324 1609399 R tRNA-Phe complement(1609324..1609399) Roseiflexus castenholzii DSM 13941 5538715 Rcas_R0014 tRNA Rcas_R0014 NC_009767.1 1609442 1609517 R tRNA-Val complement(1609442..1609517) Roseiflexus castenholzii DSM 13941 5538716 Rcas_R0015 tRNA Rcas_R0015 NC_009767.1 1609519 1609607 R tRNA-Leu complement(1609519..1609607) Roseiflexus castenholzii DSM 13941 5538717 Rcas_R0016 tRNA Rcas_R0016 NC_009767.1 1757168 1757243 R tRNA-Thr complement(1757168..1757243) Roseiflexus castenholzii DSM 13941 5538846 Rcas_R0017 tRNA Rcas_R0017 NC_009767.1 1846648 1846722 D tRNA-Asn 1846648..1846722 Roseiflexus castenholzii DSM 13941 5538919 Rcas_R0019 tRNA Rcas_R0019 NC_009767.1 1922170 1922245 D tRNA-Arg 1922170..1922245 Roseiflexus castenholzii DSM 13941 5538981 Rcas_R0020 tRNA Rcas_R0020 NC_009767.1 2187193 2187269 D tRNA-Ile 2187193..2187269 Roseiflexus castenholzii DSM 13941 5539171 Rcas_R0021 tRNA Rcas_R0021 NC_009767.1 2187313 2187388 D tRNA-Ala 2187313..2187388 Roseiflexus castenholzii DSM 13941 5539172 Rcas_R0022 tRNA Rcas_R0022 NC_009767.1 2629831 2629916 D tRNA-Leu 2629831..2629916 Roseiflexus castenholzii DSM 13941 5539529 Rcas_R0023 tRNA Rcas_R0023 NC_009767.1 2629938 2630014 D tRNA-Pro 2629938..2630014 Roseiflexus castenholzii DSM 13941 5539530 Rcas_R0024 tRNA Rcas_R0024 NC_009767.1 2784838 2784914 R tRNA-Val complement(2784838..2784914) Roseiflexus castenholzii DSM 13941 5539648 Rcas_R0025 tRNA Rcas_R0025 NC_009767.1 3224354 3224428 D tRNA-Met 3224354..3224428 Roseiflexus castenholzii DSM 13941 5539983 Rcas_R0026 tRNA Rcas_R0026 NC_009767.1 3492830 3492920 R tRNA-Ser complement(3492830..3492920) Roseiflexus castenholzii DSM 13941 5540187 Rcas_R0027 tRNA Rcas_R0027 NC_009767.1 3492941 3493032 R tRNA-Ser complement(3492941..3493032) Roseiflexus castenholzii DSM 13941 5540188 Rcas_R0028 tRNA Rcas_R0028 NC_009767.1 3493071 3493146 R tRNA-Trp complement(3493071..3493146) Roseiflexus castenholzii DSM 13941 5540189 Rcas_R0029 tRNA Rcas_R0029 NC_009767.1 3496423 3496513 D tRNA-Ser 3496423..3496513 Roseiflexus castenholzii DSM 13941 5540194 Rcas_R0030 tRNA Rcas_R0030 NC_009767.1 3602007 3602081 R tRNA-Lys complement(3602007..3602081) Roseiflexus castenholzii DSM 13941 5540271 Rcas_R0031 tRNA Rcas_R0031 NC_009767.1 3676935 3677021 D tRNA-Leu 3676935..3677021 Roseiflexus castenholzii DSM 13941 5540324 Rcas_R0032 tRNA Rcas_R0032 NC_009767.1 3677058 3677131 D tRNA-Gln 3677058..3677131 Roseiflexus castenholzii DSM 13941 5540325 Rcas_R0033 tRNA Rcas_R0033 NC_009767.1 3758719 3758795 R tRNA-Arg complement(3758719..3758795) Roseiflexus castenholzii DSM 13941 5540386 Rcas_R0034 tRNA Rcas_R0034 NC_009767.1 3835323 3835408 R tRNA-Leu complement(3835323..3835408) Roseiflexus castenholzii DSM 13941 5540446 Rcas_R0035 tRNA Rcas_R0035 NC_009767.1 3856207 3856283 D tRNA-Pro 3856207..3856283 Roseiflexus castenholzii DSM 13941 5540463 Rcas_R0036 tRNA Rcas_R0036 NC_009767.1 3882829 3882903 R tRNA-Met complement(3882829..3882903) Roseiflexus castenholzii DSM 13941 5540486 Rcas_R0040 tRNA Rcas_R0040 NC_009767.1 4059892 4059967 D tRNA-Ala 4059892..4059967 Roseiflexus castenholzii DSM 13941 5540629 Rcas_R0041 tRNA Rcas_R0041 NC_009767.1 4059974 4060049 D tRNA-Ala 4059974..4060049 Roseiflexus castenholzii DSM 13941 5540630 Rcas_R0042 tRNA Rcas_R0042 NC_009767.1 4361874 4361948 R tRNA-Cys complement(4361874..4361948) Roseiflexus castenholzii DSM 13941 5540841 Rcas_R0043 tRNA Rcas_R0043 NC_009767.1 4620290 4620366 D tRNA-Arg 4620290..4620366 Roseiflexus castenholzii DSM 13941 5541041 Rcas_R0044 tRNA Rcas_R0044 NC_009767.1 4620422 4620511 D tRNA-Ser 4620422..4620511 Roseiflexus castenholzii DSM 13941 5541042 Rcas_R0045 tRNA Rcas_R0045 NC_009767.1 4718817 4718891 D tRNA-His 4718817..4718891 Roseiflexus castenholzii DSM 13941 5541112 Rcas_R0046 tRNA Rcas_R0046 NC_009767.1 4986130 4986205 R tRNA-Lys complement(4986130..4986205) Roseiflexus castenholzii DSM 13941 5541317 Rcas_R0047 tRNA Rcas_R0047 NC_009767.1 5017289 5017364 D tRNA-Arg 5017289..5017364 Roseiflexus castenholzii DSM 13941 5541342 Rcas_R0048 tRNA Rcas_R0048 NC_009767.1 5059752 5059827 R tRNA-Gly complement(5059752..5059827) Roseiflexus castenholzii DSM 13941 5541375 Rcas_R0049 tRNA Rcas_R0049 NC_009767.1 5069471 5069547 R tRNA-Val complement(5069471..5069547) Roseiflexus castenholzii DSM 13941 5541383 Rcas_R0053 tRNA Rcas_R0053 NC_009767.1 5188287 5188361 D tRNA-Met 5188287..5188361 Roseiflexus castenholzii DSM 13941 5541486 Rcas_R0054 tRNA Rcas_R0054 NC_009767.1 5232470 5232546 D tRNA-Glu 5232470..5232546 Roseiflexus castenholzii DSM 13941 5541544 Rcas_R0055 tRNA Rcas_R0055 NC_009767.1 5573172 5573247 R tRNA-Thr complement(5573172..5573247) Roseiflexus castenholzii DSM 13941 5541835 Rcas_R0056 tRNA Rcas_R0056 NC_009767.1 5573324 5573410 R tRNA-Tyr complement(5573324..5573410) Roseiflexus castenholzii DSM 13941 5541836 Rcas_R0037 rRNA Rcas_R0037 NC_009767.1 3882909 3883024 R 5S ribosomal RNA complement(3882909..3883024) Roseiflexus castenholzii DSM 13941 5540487 Rcas_R0038 rRNA Rcas_R0038 NC_009767.1 3883094 3886016 R 23S ribosomal RNA complement(3883094..3886016) Roseiflexus castenholzii DSM 13941 5540488 Rcas_R0039 rRNA Rcas_R0039 NC_009767.1 3886210 3887678 R 16S ribosomal RNA complement(3886210..3887678) Roseiflexus castenholzii DSM 13941 5540489 Rcas_R0050 rRNA Rcas_R0050 NC_009767.1 5183512 5184980 D 16S ribosomal RNA 5183512..5184980 Roseiflexus castenholzii DSM 13941 5541483 Rcas_R0051 rRNA Rcas_R0051 NC_009767.1 5185174 5188096 D 23S ribosomal RNA 5185174..5188096 Roseiflexus castenholzii DSM 13941 5541484 Rcas_R0052 rRNA Rcas_R0052 NC_009767.1 5188166 5188281 D 5S ribosomal RNA 5188166..5188281 Roseiflexus castenholzii DSM 13941 5541485