-- dump date 20140620_041625 -- class Genbank::CDS -- table cds_note -- id note YP_003361654.1 PCNA homolog YP_003361655.1 RecF pathway YP_003361656.1 DNA gyrase/topo II, topoisomerase IV YP_003361658.1 DNA gyrase/topo II, topoisomerase IV YP_003361662.1 related transporter YP_003361665.1 rotamase YP_003361666.1 homolog of Drosophila rhomboid YP_003361668.1 homolog of Drosophila rhomboid YP_003361676.1 related enzyme YP_003361680.1 PIN domain superfamily YP_003361688.1 superfamily II helicase YP_003361695.1 related permease, Major Intrinsic Protein Family YP_003361696.1 related deacylases YP_003361697.1 conserved domain typically associated with flavoprotein oxygenase, DIM6/NTAB family YP_003361708.1 contains sigma factor-related N-terminal domain YP_003361717.1 mostly Fe transport YP_003361730.1 mu-crystallin homolog YP_003361731.1 related permease YP_003361733.1 RecF pathway YP_003361735.1 thioredoxin YP_003361743.1 implicated in the recycling of the 50S subunit (S4 paralog) YP_003361749.1 glutamine-hydrolyzing YP_003361758.1 related acetyltransferase YP_003361764.1 enzyme related to eukaryotic diacylglycerol kinase YP_003361766.1 AMP-(fatty) acid ligase YP_003361779.1 catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase YP_003361788.1 related Mg-chelatases YP_003361794.1 involved in molybdopterin and thiamine biosynthesis family 2 YP_003361796.1 helicase subunit YP_003361797.1 penicillin-binding protein 4 YP_003361807.1 related enzyme YP_003361810.1 related PRPP-binding protein YP_003361818.1 class II YP_003361823.1 related protein, alkaline phosphatase superfamily YP_003361824.1 contains the HHH domain YP_003361830.1 distant homolog of PhoU YP_003361831.1 related acetyltransferase YP_003361832.1 archaeal Glu-tRNAGln amidotransferase subunit D YP_003361852.1 cytochrome oxidase assembly factor YP_003361854.1 related Zn-dependent oxidoreductases YP_003361867.1 cobyric acid decarboxylase YP_003361871.1 related enzyme YP_003361875.1 isoleucine patch superfamily YP_003361876.1 AMP-acid ligases II, AMP-forming YP_003361887.1 related fructose-6-phosphate kinase, PfkB YP_003361890.1 PTS system EI component in bacteria YP_003361895.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_003361898.1 HSP60 family YP_003361903.1 related enzyme YP_003361906.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003361910.1 typically selenocysteine-containing YP_003361918.1 invasion-associated protein YP_003361922.1 alpha/beta hydrolase superfamily YP_003361924.1 metallo-beta-lactamase superfamily YP_003361925.1 deaminating YP_003361927.1 oxidative damage protectant YP_003361931.1 SIR2 family YP_003361933.1 YG repeat YP_003361934.1 YG repeat YP_003361946.1 AIR YP_003361952.1 SAICAR synthase YP_003361954.1 some protein contain HAMP domain YP_003361964.1 related enzyme YP_003361971.1 penicillin-binding protein YP_003361976.1 catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase YP_003361977.1 typically periplasmic, contain C-terminal PDZ domain YP_003361981.1 3'-5' exonuclease and polymerase domains YP_003361985.1 Sec1 family YP_003361988.1 with a unique C-terminal domain including a metal-binding cysteine cluster YP_003361991.1 related flavin-dependent oxidoreductases YP_003361993.1 related flavin-dependent oxidoreductases YP_003361996.1 RNase L inhibitor (RLI) homolog YP_003362013.1 related enzyme YP_003362015.1 AMP-acid ligases II, AMP-forming YP_003362019.1 related uncharacterized enzyme YP_003362024.1 related enzyme of enolase superfamily YP_003362026.1 contains double-stranded beta-helix domain YP_003362027.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003362029.1 AMP-forming YP_003362031.1 ABC-type amino acid transport/signal transduction system, periplasmic component/domain YP_003362038.1 HAD superfamily YP_003362041.1 permuted catalytic motifs YP_003362049.1 related to CMP and AMP kinases YP_003362050.1 thioredoxin YP_003362054.1 related flavin-dependent oxidoreductases YP_003362072.1 helicase subunit YP_003362083.1 related permease YP_003362087.1 levanase /invertase YP_003362089.1 related acetyltransferase YP_003362101.1 involved in molybdopterin and thiamine biosynthesis family 2 YP_003362109.1 consists of a metallo-beta-lactamase domain and an RNA-binding KH domain YP_003362110.1 pyridoxal-binding, C-terminal domain YP_003362111.1 aminomethyltransferase YP_003362115.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_003362116.1 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_003362117.1 ClpP class YP_003362121.1 GTPase YP_003362153.1 related kinases YP_003362156.1 IF-1 YP_003362159.1 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_003362170.1 contains amidotransferase and phosphosugar isomerase domains YP_003362172.1 holo-ACP synthase YP_003362174.1 involved in lipopolysaccharide synthesis YP_003362183.1 with possible chaperone activity YP_003362186.1 HSP10 YP_003362188.1 HSP60 family YP_003362193.1 related metal-dependent hydrolases YP_003362194.1 PP-ATPase domain/subunit YP_003362203.1 helicase subunit YP_003362213.1 osmoprotectant binding protein YP_003362233.1 related protein YP_003362234.1 azaleucine resistance YP_003362235.1 azaleucine resistance YP_003362236.1 azaleucine resistance YP_003362237.1 regulator of disulfide bond formation YP_003362239.1 AMP-(fatty) acid ligase YP_003362242.1 N-terminal pyroglutamyl peptidase YP_003362246.1 probably nucleic-acid-binding YP_003362248.1 LmbE homologs YP_003362253.1 ABC-type amino acid transport/signal transduction system, periplasmic component/domain YP_003362258.1 mostly Fe transport YP_003362259.1 related deacylases YP_003362266.1 contains CBS domain YP_003362270.1 PHP family YP_003362281.1 ferrochelatase YP_003362291.1 related 3'-5' exonucleases YP_003362305.1 suppresses sigma54-dependent transcription, IM30 YP_003362307.1 related protein YP_003362309.1 typically periplasmic, contain C-terminal PDZ domain YP_003362311.1 SpoU class YP_003362312.1 related enzyme YP_003362313.1 contains the PP-loop ATPase domain, 5-methylaminomethyl-2-thiouridylate YP_003362315.1 PfkB; related fructose-6-phosphate kinase YP_003362320.1 related hydrolases of the PHP family YP_003362322.1 RRM domain YP_003362323.1 PSrp-1 YP_003362324.1 ATPase, RNA helicase YP_003362325.1 mu-crystallin homolog YP_003362356.1 related enzyme of inositol monophosphatase family YP_003362361.1 sigma24 homolog YP_003362362.1 related esterases YP_003362363.1 related enzyme YP_003362364.1 related protein containing CBS domains YP_003362365.1 related protein containing CBS domains YP_003362371.1 other HIT family hydrolase YP_003362380.1 related enzyme YP_003362381.1 related enzyme YP_003362383.1 thioredoxin YP_003362384.1 cobalamin-binding domain YP_003362387.1 sigma70/sigma32 YP_003362391.1 contains CBS domain YP_003362395.1 alpha/beta hydrolase superfamily YP_003362401.1 acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_003362420.1 typically periplasmic, contain C-terminal PDZ domain YP_003362421.1 catechol pathway YP_003362437.1 related enzyme YP_003362441.1 related protein YP_003362451.1 ATPase YP_003362452.1 mostly Fe transport YP_003362454.1 dynamin-related YP_003362459.1 typically selenocysteine-containing YP_003362465.1 related ATP-grasp enzyme YP_003362477.1 AMP-acid ligases II, AMP-forming YP_003362485.1 1,4-beta-N-acetylmuramidase YP_003362494.1 contains KH domain YP_003362495.1 PX YP_003362502.1 with duplicated ATPase domains YP_003362506.1 related enzyme YP_003362508.1 replication factor Y YP_003362516.1 trigger factor YP_003362524.1 alpha/beta hydrolase superfamily YP_003362536.1 typically selenocysteine-containing YP_003362537.1 ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase YP_003362538.1 1,4-beta-cellobiosidase A YP_003362543.1 RAMP superfamily YP_003362555.1 23S RNA-specific YP_003362556.1 flavoprotein YP_003362557.1 uncharacterized homolog of plant Iojap protein YP_003362571.1 related Zn-dependent dehydrogenase YP_003362578.1 related acetyltransferase YP_003362581.1 catechol pathway YP_003362591.1 other HIT family hydrolases YP_003362609.1 related helicase YP_003362619.1 related kinases YP_003362622.1 deaminating YP_003362625.1 related protein YP_003362627.1 related deacylases YP_003362629.1 possible Holliday junction resolvase in Mycoplasmas and B. subtilis YP_003362636.1 EF-P/eIF-5A YP_003362642.1 related cyclic amidohydrolases YP_003362646.1 split gene in MJ YP_003362647.1 some protein contain HAMP domain YP_003362657.1 related DNA-binding protein YP_003362665.1 related Fe-S oxidoreductases YP_003362670.1 related protein YP_003362671.1 predicted ATPase YP_003362673.1 related protein containing CBS domains YP_003362677.1 trigger factor YP_003362679.1 family B YP_003362684.1 related methyltransferase YP_003362699.1 including yeast histone deacetylase and acetoin utilization protein YP_003362701.1 related Ca2+-binding protein YP_003362702.1 stomatin/prohibitin homologs YP_003362704.1 consists of S1 domain and a Zn-ribbon domain YP_003362707.1 related deacylases YP_003362713.1 RecF pathway YP_003362715.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003362719.1 related Zn-dependent dehydrogenase YP_003362721.1 containing PCI domain YP_003362726.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003362729.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003362734.1 acylaminoacyl-peptidase YP_003362736.1 acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_003362752.1 involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 YP_003362753.1 exonuclease V YP_003362770.1 alpha/beta hydrolase superfamily YP_003362772.1 NDP forming YP_003362774.1 MutS family YP_003362778.1 replication factor Y YP_003362785.1 stomatin/prohibitin homolog YP_003362790.1 alpha/beta hydrolase superfamily YP_003362792.1 contains GAD domain YP_003362798.1 related enzyme YP_003362802.1 polynucleotide phosphorylase YP_003362804.1 3'-5' exonuclease and polymerase domains YP_003362806.1 possibly involved in aromatic compounds catabolism YP_003362810.1 involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC protein YP_003362824.1 probably nucleic-acid-binding YP_003362841.1 3'->5' exoribonuclease YP_003362845.1 related flavin-dependent oxidoreductases YP_003362846.1 precorrin-2 oxidase/ferrochelatase domain YP_003362853.1 consists of a PIN domain and a Zn-ribbon module YP_003362856.1 related polyferredoxins YP_003362861.1 AAA+ superfamily YP_003362863.1 contains nucleotidyltransferase and I-patch acetyltransferase domains YP_003362883.1 conserved domain protein associated with peptide methionine sulfoxide reductase YP_003362886.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003362895.1 contains forkhead-associated domain YP_003362898.1 related deacylases YP_003362902.1 DNA gyrase/topo II, topoisomerase IV YP_003362908.1 protein PII YP_003362912.1 DNA gyrase/topo II, topoisomerase IV YP_003362923.1 middle subunit CoxM/CutM homologs YP_003362928.1 PCNA homolog YP_003362934.1 mitochondrial delta subunit YP_003362940.1 mitochondrial oligomycin sensitivity protein YP_003362943.1 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_003362945.1 penicillin-binding protein YP_003362951.1 SUA5 YP_003362965.1 related Zn-dependent oxidoreductases YP_003362967.1 periplasmic molybdate-binding domain YP_003362977.1 4-oxalocrotonate tautomerase homolog YP_003362979.1 AMP-acid ligases II, AMP-forming YP_003362981.1 consists of a Zn-ribbon and ATP-cone domains YP_003362982.1 stomatin/prohibitin homolog YP_003362985.1 23S RNA-specific YP_003363011.1 involved in heme utilization or adhesion YP_003363018.1 DNA gyrase/topo II, topoisomerase IV YP_003363024.1 AMP-forming YP_003363025.1 related enzyme YP_003363029.1 lipoate-binding YP_003363032.1 AMP-forming YP_003363035.1 contains sigma factor-related N-terminal domain YP_003363037.1 related permease, Major Intrinsic Protein Family YP_003363049.1 related pseudouridylate synthases YP_003363056.1 UTP-ammonia lyase YP_003363059.1 related enzyme YP_003363069.1 related PRPP-binding protein YP_003363070.1 AMP-acid ligases II, AMP-forming YP_003363076.1 contain duplicated ATPase YP_003363087.1 IF-3 YP_003363090.1 ProFAR isomerase YP_003363093.1 RecA-mediated autopeptidases YP_003363109.1 competence- and mitomycin-induced YP_003363117.1 related cyclic amidohydrolases YP_003363120.1 polynucleotide phosphorylase YP_003363123.1 related permease YP_003363133.1 IF-2; GTPase YP_003363157.1 bacterial type YP_003363159.1 related acetyltransferase YP_003363161.1 class II YP_003363176.1 PET112 homolog YP_003363177.1 related amidases YP_003363181.1 contains BRCT domain type II YP_003363183.1 some protein contain HAMP domain YP_003363188.1 subunits alpha and beta YP_003363189.1 related transporter, MFS superfamily YP_003363191.1 related ATP-grasp enzyme YP_003363199.1 related flavoprotein YP_003363202.1 related enzyme YP_003363203.1 superfamily II helicase YP_003363208.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003363222.1 general stress protein Ctc YP_003363223.1 related enzyme YP_003363238.1 isoleucine patch superfamily YP_003363246.1 contains nucleotidyltransferase and I-patch acetyltransferase domains YP_003363250.1 rRNA methylation YP_003363261.1 NCAIR synthetase YP_003363262.1 NCAIR mutase YP_003363264.1 related protein YP_003363270.1 acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase YP_003363272.1 related peptidases YP_003363274.1 LmbE homolog YP_003363289.1 related regulatory protein, some contain LysM/invasin domains YP_003363303.1 related PLP-dependent protein YP_003363313.1 only IMP cyclohydrolase domain in Aful YP_003363315.1 related hemolysin YP_003363317.1 contains PIN domain YP_003363319.1 SNF2 family YP_003363320.1 containing a CheY-like receiver domain and a methylesterase domain YP_003363325.1 related permease YP_003363326.1 related permease YP_003363327.1 related ATPases involved in archaeal flagella biosynthesis YP_003363331.1 heat shock protein YP_003363340.1 related kinases YP_003363342.1 split gene in MJ YP_003363344.1 related transporter YP_003363352.1 deaminating YP_003363355.1 involved in molybdopterin and thiamine biosynthesis family 2 YP_003363356.1 SCO1 /SenC/PrrC, involved in biogenesis of respiratory and photosynthetic system YP_003363359.1 mostly Fe transport YP_003363360.1 thioredoxin YP_003363363.1 putative virulence factor YP_003363372.1 related esterases YP_003363376.1 catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase YP_003363391.1 alpha/beta hydrolase superfamily YP_003363398.1 GTP YP_003363408.1 23S RNA-specific YP_003363415.1 related protein, alkaline phosphatase superfamily YP_003363417.1 related permease YP_003363418.1 related permease YP_003363424.1 RecF pathway YP_003363428.1 FGAM synthase, PurS component YP_003363429.1 FGAM synthase, glutamine amidotransferase domain YP_003363431.1 FGAM synthase, synthetase domain YP_003363433.1 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_003363459.1 related enzyme YP_003363468.1 osmoprotectant binding protein YP_003363474.1 related oxidoreductases YP_003363481.1 related flavin-dependent oxidoreductases YP_003363486.1 AMP-(fatty) acid ligase YP_003363502.1 related enzyme of enolase superfamily YP_003363508.1 ABC-type amino acid transport/signal transduction system, periplasmic component/domain YP_003363510.1 ABC-type amino acid transport/signal transduction system, periplasmic component/domain YP_003363514.1 AIR YP_003363518.1 containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_003363530.1 related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit YP_003363537.1 RAD52 pathway YP_003363542.1 guanosine polyphosphate synthetase YP_003363555.1 related regulatory protein; some contain LysM/invasin domains YP_003363560.1 related to aryl-alcohol dehydrogenase YP_003363563.1 cobalamin-independent YP_003363566.1 predicted membrane domain YP_003363570.1 related Mg-chelatases YP_003363575.1 related protein YP_003363586.1 with different specificities, related to short-chain alcohol dehydrogenase YP_003363587.1 related Zn-dependent dehydrogenase YP_003363596.1 containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_003363602.1 class II YP_003363614.1 surface protein transpeptidase YP_003363615.1 trigger factor YP_003363622.1 related to UDP-glucuronosyltransferase YP_003363635.1 thioredoxin