-- dump date   	20240506_001315
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_011898.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001348.1.REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong ZhouREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52 Pseudo Genes (incomplete)         :: 38 of 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52 Pseudo Genes (incomplete)         :: 38 of 52 Pseudo Genes (internal stop)      :: 9 of 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52 Pseudo Genes (incomplete)         :: 38 of 52 Pseudo Genes (internal stop)      :: 9 of 52 Pseudo Genes (multiple problems)  :: 7 of 52REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52 Pseudo Genes (incomplete)         :: 38 of 52 Pseudo Genes (internal stop)      :: 9 of 52 Pseudo Genes (multiple problems)  :: 7 of 52 CRISPR Arrays                     :: 3REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52 Pseudo Genes (incomplete)         :: 38 of 52 Pseudo Genes (internal stop)      :: 9 of 52 Pseudo Genes (multiple problems)  :: 7 of 52 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001348.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4002584 Source DNA and bacteria available from Jizhong Zhou (jzhou@rccc.ou.edu) Contacts: Jizhong Zhou (jzhou@rccc.ou.edu)           David Bruce (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000022065.1-RS_2024_04_07 Annotation Date                   :: 04/07/2024 08:30:09 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 3,555 CDSs (total)                      :: 3,465 Genes (coding)                    :: 3,413 CDSs (with protein)               :: 3,413 Genes (RNA)                       :: 90 rRNAs                             :: 8, 8, 8 (5S, 16S, 23S) complete rRNAs                    :: 8, 8, 8 (5S, 16S, 23S) tRNAs                             :: 62 ncRNAs                            :: 4 Pseudo Genes (total)              :: 52 CDSs (without protein)            :: 52 Pseudo Genes (ambiguous residues) :: 0 of 52 Pseudo Genes (frameshifted)       :: 12 of 52 Pseudo Genes (incomplete)         :: 38 of 52 Pseudo Genes (internal stop)      :: 9 of 52 Pseudo Genes (multiple problems)  :: 7 of 52 CRISPR Arrays                     :: 3 ##Genome-Annotation-Data-END## COMPLETENESS: full length.