-- dump date   	20140620_042201
-- class       	Genbank::tRNA
-- table       	trna_note
-- id	note
Runsl_R0007	KEGG: dfe:Dfer_2989 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0008	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: sli:Slin_6324 amidase; PFAM: Amidase; PRIAM: Amidase; SPTR: Amidase
Runsl_R0010	KEGG: sli:Slin_4082 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0012	COGs: COG2262 GTPase; InterPro IPR016496:IPR005225:IPR002917; KEGG: sli:Slin_6253 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding proten HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein
Runsl_R0013	COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: dfe:Dfer_3744 beta-lactamase domain protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Beta-lactamase domain protein
Runsl_R0014	COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: sli:Slin_1088 PfkB domain protein; PFAM: Carbohydrate/purine kinase; PRIAM: Fructokinase; SPTR: PfkB domain protein
Runsl_R0020	KEGG: dfe:Dfer_4027 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0023	COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795:IPR004161:IPR004160:IPR004541:IPR 005225; KEGG: dfe:Dfer_3456 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein
Runsl_R0024	InterPro IPR001901:IPR005807; KEGG: sli:Slin_4483 preprotein translocase, SecE subunit; PFAM: Protein secE/sec61-gamma protein; SPTR: Preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; manually curated
Runsl_R0025	InterPro IPR003088; KEGG: dfe:Dfer_3477 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I
Runsl_R0026	COGs: COG0058 Glucan phosphorylase; InterPro IPR011834; KEGG: dfe:Dfer_3228 alpha-glucan phosphorylase; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: Alpha-glucan phosphorylase
Runsl_R0027	KEGG: phe:Phep_0144 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0028	COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847; KEGG: cpi:Cpin_4134 ModE family transcriptional regulator; PFAM: HTH transcriptional regulator, LysR; SPTR:  transcriptional regulator, ModE family
Runsl_R0029	KEGG: dfe:Dfer_4027 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0030	COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: dfe:Dfer_4729 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0031	COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR008881:IPR005215; KEGG: dfe:Dfer_4576 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor
Runsl_R0034	COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: lby:Lbys_2499 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SPTR: (Acyl-carrier-protein) S-malonyltransferase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase
Runsl_R0035	KEGG: bvu:BVU_2900  transposase; SPTR:  uncharacterized protein
Runsl_R0036	InterPro IPR002711:IPR003615; KEGG: pmz:HMPREF0659_A7222 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: H-N-H endonuclease F-TflIV
Runsl_R0038	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: sli:Slin_0085 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Serine 3-dehydrogenase; SPTR: Short-chain dehydrogenase/reductase SDR
Runsl_R0039	KEGG: dfe:Dfer_4027 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0040	COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: sli:Slin_3123 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR:  uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3
Runsl_R0041	InterPro IPR002694; KEGG: bfr:BF1279 DNA primase; SPTR: DNA primase
Runsl_R0042	COGs: COG0153 Galactokinase; InterPro IPR019539:IPR006204:IPR013750:IPR000705; KEGG: dfe:Dfer_2819 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: Galactokinase; TIGRFAM: Galactokinase
Runsl_R0044	InterPro IPR007139; KEGG: sli:Slin_2892 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR:  uncharacterized protein
Runsl_R0045	Prodigal; manually curated
Runsl_R0047	COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: dfe:Dfer_2108 aromatic amino acid hydroxylase; PFAM: Aromatic amino acid hydroxylase, C-terminal; PRIAM: Phenylalanine 4-monooxygenase; SPTR: Aromatic amino acid hydroxylase
Runsl_R0048	COGs: COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; KEGG: cpc:Cpar_0509 isoprenoid biosynthesis protein with amidotransferase-like domain; SPTR: Uncharacterized protein involved in an early stage of isoprenoid biosynthesis
Runsl_R0049	KEGG: dfe:Dfer_4027 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0050	KEGG: shg:Sph21_1434 hypothetical protein; SPTR:  uncharacterized protein
Runsl_R0051	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: dfe:Dfer_5739 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas E; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: Ureidoglycolate lyase; SPTR: 5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e
Runsl_R0052	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: sli:Slin_3277 beta-lactamase; SPTR: Beta-lactamase domain protein