-- dump date   	20240420_081443
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_009380.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP000667.1.REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul JensenREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu)REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166 Pseudo Genes (incomplete)         :: 124 of 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166 Pseudo Genes (incomplete)         :: 124 of 166 Pseudo Genes (internal stop)      :: 10 of 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166 Pseudo Genes (incomplete)         :: 124 of 166 Pseudo Genes (internal stop)      :: 10 of 166 Pseudo Genes (multiple problems)  :: 44 of 166REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166 Pseudo Genes (incomplete)         :: 124 of 166 Pseudo Genes (internal stop)      :: 10 of 166 Pseudo Genes (multiple problems)  :: 44 of 166 CRISPR Arrays                     :: 1REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166 Pseudo Genes (incomplete)         :: 124 of 166 Pseudo Genes (internal stop)      :: 10 of 166 Pseudo Genes (multiple problems)  :: 44 of 166 CRISPR Arrays                     :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP000667.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4001585 Source DNA and bacteria available from Paul Jensen (pjensen@ucsd.edu) Contacts: Paul Jensen (pjensen@ucsd.edu)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-PGF Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Name                   :: GCF_000016425.1-RS_2024_03_27 Annotation Date                   :: 03/27/2024 01:02:22 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.7 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,764 CDSs (total)                      :: 4,700 Genes (coding)                    :: 4,534 CDSs (with protein)               :: 4,534 Genes (RNA)                       :: 64 rRNAs                             :: 3, 3, 3 (5S, 16S, 23S) complete rRNAs                    :: 3, 3, 3 (5S, 16S, 23S) tRNAs                             :: 52 ncRNAs                            :: 3 Pseudo Genes (total)              :: 166 CDSs (without protein)            :: 166 Pseudo Genes (ambiguous residues) :: 0 of 166 Pseudo Genes (frameshifted)       :: 77 of 166 Pseudo Genes (incomplete)         :: 124 of 166 Pseudo Genes (internal stop)      :: 10 of 166 Pseudo Genes (multiple problems)  :: 44 of 166 CRISPR Arrays                     :: 1 ##Genome-Annotation-Data-END## COMPLETENESS: full length.