-- dump date   	20140620_043334
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
454166000016	zinc metalloproteinase Mpr protein; this gene contains a frame shift which may be the result of sequencing error
454166000083	BcfH; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01323
454166000084	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166000127	transcriptional activatory protein CaiF; this gene contains a frame shift which may be the result of sequencing error
454166000159	DNA polymerase II (Pol II); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00136; match to protein family HMM PF03104
454166000161	homologous to EryA gene product in L07626; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766
454166000201	secretion monitor protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06558
454166000288	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166000337	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166000360	transposase IS66; this gene contains a premature stop which may be the result of sequencing error
454166000366	rhs core protein with extension; this gene contains a frame shift which may be the result of sequencing error
454166000369	cytoplasmic protein; this gene contains a premature stop which may be the result of sequencing error
454166000390	acyl-coenzyme A dehydrogenase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00441; match to protein family HMM PF09317
454166000410	'3-isopropylmalate dehydratase, large subunit; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00330; match to protein family HMM TIGR00170'
454166000422	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166000457	inner membrane protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00027
454166000497	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166000513	'2-aminoethylphosphonate ABC transporter, permease protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00528; match to protein family HMM TIGR03226'
454166000532	lipoprotein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03923
454166000700	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
454166000920	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166000926	sugar phosphatase SupH; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF08282
454166000968	inner membrane protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02302
454166000997	transposase for insertion sequence element isrm3; this gene contains a frame shift which may be the result of sequencing error
454166000998	transposase for insertion sequence element isrm3; this gene contains a frame shift which may be the result of sequencing error
454166001022	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166001082	CoA-binding protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02629
454166001166	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166001168	cold-shock' DNA-binding domain; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00313
454166001211	protein FliZ; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02899
454166001237	L-arabinose transport system permease protein AraH; this gene contains a premature stop which may be the result of sequencing error
454166001331	'transporter, major facilitator family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07690'
454166001376	membrane-bound lytic murein transglycosylase E (Mureinhydrolase E); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01464
454166001440	inner membrane protein; this gene contains a frame shift which may be the result of sequencing error
454166001447	protein YciU; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF04269
454166001490	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166001634	'formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04879; match to protein family HMM TIGR01409'
454166001681	protein YneE; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05249
454166001829	proline iminopeptidase like protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00561; match to protein family HMM TIGR01250
454166001843	cytoplasmic protein; this gene contains a frame shift which may be the result of sequencing error
454166001862	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166001936	'transcriptional regulator, AraC family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00165'
454166001944	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
454166001981	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166002098	transposase //family protein; this gene contains a frame shift which may be the result of sequencing error
454166002099	transposase for insertion sequence element A; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01548; match to protein family HMM PF02371
454166002127	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166002137	integrase; this gene contains a frame shift which may be the result of sequencing error
454166002141	DNA-binding prophage protein; this gene contains a frame shift which may be the result of sequencing error
454166002152	mate efflux family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797
454166002155	ACR3 permease; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01758
454166002276	protein YegH; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00571; match to protein family HMM PF03471; match to protein family HMM PF03741
454166002293	inner membrane protein; this gene contains a frame shift which may be the result of sequencing error
454166002314	fructose-bisphosphate aldolase class 1 (Fructose-biphosphate aldolase class I) (FBP aldolase); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01791
454166002355	'transcriptional regulator, LysR family; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00126; match to protein family HMM PF03466'
454166002389	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR02178
454166002421	ferredoxin-type protein NapH; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00037; match to protein family HMM TIGR02163
454166002424	NapD protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03927
454166002482	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166002554	ribosomal large subunit L3 protein glutamine methyltransferase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03533
454166002571	lipid A biosynthesis lauroyl acyltransferase (Heat shockprotein B); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03279; match to protein family HMM TIGR02207
454166002638	ethanolamine utilization protein EutM; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00936
454166002657	acetyltransferase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF05127
454166002685	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166002691	RatB; this gene contains a frame shift which may be the result of sequencing error
454166002697	ribosome-associated GTPase EngA; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03594
454166002750	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518
454166002778	identified by match to protein family HMM PF05175
454166002850	cytochrome C assembly protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01578
454166002862	'type I secretion outer membrane protein, TolC family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02321; match to protein family HMM TIGR01844'
454166002871	'phage tail protein, P2 GpE family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06528'
454166002898	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06183
454166002901	bacteriophage replication gene A; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF05840
454166002928	protein CsiD; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF08943
454166003017	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
454166003032	cell invasion protein SipC (Effector protein sipC); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF09599; match to protein family HMM TIGR02101
454166003052	probable transposase for transposon; this gene contains a frame shift which may be the result of sequencing error
454166003088	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
454166003090	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
454166003101	Sop effector protein SopD; this gene contains a frame shift which may be the result of sequencing error
454166003129	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003159	membrane-bound lytic murein transglycosylase A (Murein hydrolase A) (Mlt38); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03562; match to protein family HMM PF06725
454166003162	N-acetylmuramoyl-L-alanine amidase AmiC; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01520; match to protein family HMM TIGR01409
454166003205	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003222	peptide chain release factor 2; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020
454166003249	ribose 5-phosphate isomerase A; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021
454166003251	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003311	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003362	AraC-type transcriptional regulator N-terminus domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00165; match to protein family HMM PF06719
454166003366	2-oxoglutarate/malate translocator; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00939; match to protein family HMM PF03600; match to protein family HMM TIGR00785
454166003459	hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by glimmer
454166003461	glycerate kinase 2; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045
454166003493	polyribonucleotide nucleotidyltransferase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591
454166003544	'glutamate synthase (NADPH), large subunit; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898'
454166003618	protein YrdA; this gene contains a frame shift which may be the result of sequencing error
454166003637	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003664	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003842	2-dehydro-3-deoxygluconokinase (2-keto-3-deoxygluconokinase) (3-deoxy-2-oxo-D-gluconate kinase) (KDG kinase); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00294
454166003856	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003857	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166003969	phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521
454166004024	purine ribonucleoside efflux pump NepI; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07690
454166004193	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004194	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004212	'hydrolase, Cof family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484'
454166004292	'formate dehydrogenase-O, major subunit; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04879; match to protein family HMM TIGR01409'
454166004329	CDP-diacylglycerol pyrophosphatase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02611; match to protein family HMM TIGR00672
454166004334	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
454166004335	CDP-diacylglycerol pyrophosphatase; this gene contains a premature stop which may be the result of sequencing error
454166004387	fatty acid biosynthesis regulator; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00440
454166004415	inner membrane protein; this gene contains a frame shift which may be the result of sequencing error
454166004416	cytoplasmic protein; this gene contains a frame shift which may be the result of sequencing error
454166004417	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004437	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004446	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004516	phage shock protein G; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF09583; match to protein family HMM TIGR02975
454166004537	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004561	formate dehydrogenase H; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF04879
454166004585	oxidoreductase component; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06192
454166004596	transposase; this gene contains a frame shift which may be the result of sequencing error
454166004597	'ISSod4, transposase, interruption; this gene contains a frame shift which may be the result of sequencing error'
454166004598	transposase for insertion sequence element isrm3; this gene contains a frame shift which may be the result of sequencing error
454166004601	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
454166004603	pts system mannose-specific eiiab component (eiiab-man); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03610; match to protein family HMM TIGR00824
454166004604	mannose-specific pts system component iicd; this gene contains a frame shift which may be the result of sequencing error
454166004627	transcriptional regulatory protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00196
454166004629	quaternary ammonium compound-resistance protein SugE; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00893
454166004693	'transcriptional regulator, HxlR family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01638'
454166004752	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004801	'phage tail protein, P2 GpE family; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF06528'
454166004803	truncated transposase; this gene contains a premature stop which may be the result of sequencing error
454166004810	relaxase; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF07514
454166004812	DNA primase TraC (Replication primase); this gene contains a frame shift which may be the result of sequencing error
454166004813	antirestriction protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF08401
454166004818	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
454166004835	filamentation induced by cAMP protein Fic; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02661
454166004872	methyl-accepting chemotaxis protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02203
454166004912	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
454166004932	periplasmic protein; this gene contains a frame shift which may be the result of sequencing error