-- dump date   	20140620_053948
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
423368000079	transposase InsC1 for insertion sequence ISEc9, truncation; identified by match to protein family HMM PF01609
423368000080	type IV conjugative transfer system protein TraC, truncation; identified by similarity to GB:AAL59681.1
423368000083	transcriptional regulatory protein EntR, truncation; identified by similarity to SP:O69280
423368000087	transposase InsC2 for insertion sequence ISEc9, truncation
423368000092	transcriptional regulatory protein EntR, truncation; identified by similarity to SP:O69280
423368000142	resolvase TnpR for transposon Tn21, truncation; identified by match to protein family HMM PF00239; match to protein family HMM PF02796
423368000158	transposase TniA for transposition module tni, truncation
423368000195	conserved hypothetical protein, truncation
423368000202	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
423368000305	homologous to EryA gene product in L07626; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766
423368000507	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
423368000520	cytoplasmic protein; this gene contains a premature stop which may be the result of sequencing error
423368000522	cytoplasmic protein; this gene contains a frame shift which may be the result of sequencing error
423368000524	transposase B; this gene contains a frame shift which may be the result of sequencing error
423368000554	transposase InsF for insertion sequence IS3A/B/C/D/E/fA; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00665
423368000555	glycerol dehydratase reactivation factor large subunit; this gene contains a frame shift which may be the result of sequencing error
423368000844	identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR03140
423368001108	soluble aldose sugar dehydrogenase YliI (Asd); this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF03811; match to protein family HMM PF07995
423368001231	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
423368001256	attachment/invasion protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06316
423368001266	'ISAfe4, transposase Orf3; this gene contains a frame shift which may be the result of sequencing error'
423368001292	CoA-binding protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02629
423368001514	conserved domain protein; this gene contains a frame shift which may be the result of sequencing error
423368001830	coiled-coil protein; this gene contains a frame shift which may be the result of sequencing error
423368001846	'formate dehydrogenase, nitrate inducible, alpha subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01553'
423368002164	integrase; this gene contains a frame shift which may be the result of sequencing error
423368002167	'lipopolysaccharide 1,2-N-acetylglucosaminetransferase; this gene contains a frame shift which may be the result of sequencing error'
423368002170	IS256 family transposase; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00872
423368002182	protein gp55; this gene contains a frame shift which may be the result of sequencing error
423368002270	protein FliZ; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02899
423368002319	integrase; this gene contains a frame shift which may be the result of sequencing error
423368002323	branched chain amino acid transport protein; this gene contains a frame shift which may be the result of sequencing error
423368002420	'CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase (CDP-6-deoxy-delta-3,4-glucoseen reductase) (E3); this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970'
423368002929	tail assembly protein K; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00877
423368002984	identified by match to protein family HMM PF05175
423368003192	secreted effector protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF03421
423368003264	conserved hypothetical protein; this region contains one or more premature stops and/or frameshifts
423368003265	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error
423368003273	crispr-associated helicase Cas3; this gene contains a premature stop which may be the result of sequencing error
423368003280	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
423368003525	AraC-type transcriptional regulator N-terminus domain protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00165; match to protein family HMM PF06719
423368003529	2-oxoglutarate/malate translocator; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00939; match to protein family HMM PF03600; match to protein family HMM TIGR00785
423368003604	pirin family protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF02678
423368003698	conserved hypothetical protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06250
423368003699	hypothetical cytosolic protein; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF06250
423368003770	protein YrdA; this gene contains a frame shift which may be the result of sequencing error
423368003848	BigA; this gene contains a premature stop which may be the result of sequencing error
423368003849	BigB; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF03797
423368003993	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
423368004312	exported protein; this gene contains a frame shift which may be the result of sequencing error
423368004401	'formate dehydrogenase-O, major subunit, selenocysteine-containing; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01553'
423368004435	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error
423368004655	phage shock protein G; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF09583; match to protein family HMM TIGR02975
423368004698	'formate dehydrogenase, alpha subunit; this gene contains a premature stop which may be the result of sequencing error; identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01591'
423368004731	conserved hypothetical protein; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM TIGR01784
423368004735	outer membrane usher protein AfaC; this gene contains a frame shift which may be the result of sequencing error
423368004736	outer membrane usher protein FimD; this gene contains a frame shift which may be the result of sequencing error; identified by match to protein family HMM PF00577
423368004909	HNH nuclease; this gene contains a premature stop which may be the result of sequencing error
423368005010	periplasmic protein; this gene contains a frame shift which may be the result of sequencing error