-- dump date 20140620_054118 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 chrom_position -- field 4 chromosome -- field 5 codon_start -- field 6 contig -- field 7 description -- field 8 end_pos -- field 9 gene -- field 10 gene_id -- field 11 name -- field 12 organism -- field 13 product -- field 14 protein_id -- field 15 start_pos -- field 16 strand -- field 17 taxid -- field 18 type -- header -- id GI chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002140848.1 197361213 229..294 1 NC_011147.1 thr operon leader peptide 294 thrL 554290000001 thrL Salmonella enterica subsp. enterica serovar Paratyphi A str. thr operon leader peptide YP_002140848.1 229 D 554290 CDS YP_002140849.1 197361214 376..2838 1 NC_011147.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 2838 thrA 554290000002 thrA Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional aspartokinase I/homoserine dehydrogenase I YP_002140849.1 376 D 554290 CDS YP_002140850.1 197361215 2840..3769 1 NC_011147.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 3769 554290000003 SSPA0003 Salmonella enterica subsp. enterica serovar Paratyphi A str. homoserine kinase YP_002140850.1 2840 D 554290 CDS YP_002140851.1 197361216 3773..5059 1 NC_011147.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 5059 554290000004 SSPA0004 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonine synthase YP_002140851.1 3773 D 554290 CDS YP_002140852.1 197361217 complement(5153..5926) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 5926 554290000005 SSPA0005 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140852.1 5153 R 554290 CDS YP_002140853.1 197361218 complement(6005..7435) 1 NC_011147.1 pseudogene in Paratyphi A strain ATCC9150 (SPA0006) due to single base deletion; amino-acid transport protein 7435 554290000006 SSPA0005a Salmonella enterica subsp. enterica serovar Paratyphi A str. amino-acid transport protein YP_002140853.1 6005 R 554290 CDS YP_002140854.1 197361219 7704..8657 1 NC_011147.1 similar to Salmonella typhi CT18 transaldolase B; transaldolase B 8657 554290000007 SSPA0006 Salmonella enterica subsp. enterica serovar Paratyphi A str. transaldolase B YP_002140854.1 7704 D 554290 CDS YP_002140855.1 197361220 8768..9358 1 NC_011147.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 9358 mogA 554290000008 mogA Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdenum cofactor biosynthesis protein MogA YP_002140855.1 8768 D 554290 CDS YP_002140856.1 197361221 complement(9415..9981) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 9981 554290000009 SSPA0008 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140856.1 9415 R 554290 CDS YP_002140857.1 197361222 complement(10131..10844) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 10844 554290000010 SSPA0009 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140857.1 10131 R 554290 CDS YP_002140858.1 197361223 complement(10880..11284) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 11284 554290000011 SSPA0010 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140858.1 10880 R 554290 CDS YP_002140859.1 197361224 11634..13550 1 NC_011147.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 13550 dnaK 554290000012 dnaK Salmonella enterica subsp. enterica serovar Paratyphi A str. molecular chaperone DnaK YP_002140859.1 11634 D 554290 CDS YP_002140860.1 197361225 13636..14763 1 NC_011147.1 'chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion'; chaperone protein DnaJ 14763 554290000013 SSPA0012 Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone protein DnaJ YP_002140860.1 13636 D 554290 CDS YP_002140861.1 197361226 15047..15994 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 15994 554290000014 SSPA0013 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002140861.1 15047 D 554290 CDS YP_002140862.1 197361227 16121..16465 1 NC_011147.1 similar to Salmonella typhi CT18 phage protein; hypothetical protein 16465 554290000015 SSPA0014 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140862.1 16121 D 554290 CDS YP_002140863.1 197361228 complement(16526..17059) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 17059 554290000016 SSPA0015 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140863.1 16526 R 554290 CDS YP_002140864.1 197361229 complement(17076..17519) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 17519 554290000017 SSPA0016 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140864.1 17076 R 554290 CDS YP_002140865.2 449784909 20091..23087 1 NC_011147.1 similar to Salmonella typhimurium hydroxymethyltransferase; hydroxymethyltransferase 23087 554290000019 SSPA0017 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroxymethyltransferase YP_002140865.2 20091 D 554290 CDS YP_002140866.1 197361231 23368..24072 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 24072 554290000020 SSPA0018 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140866.1 23368 D 554290 CDS YP_002140867.1 197361232 24502..25044 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 25044 554290000021 SSPA0019 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002140867.1 24502 D 554290 CDS YP_002140868.1 197361233 25145..25831 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone; fimbrial chaperone 25831 554290000022 SSPA0020 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone YP_002140868.1 25145 D 554290 CDS YP_002140869.1 197361234 25836..28457 1 NC_011147.1 similar to Salmonella typhimurium fimbrial usher; fimbrial usher 28457 554290000023 SSPA0021 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial usher YP_002140869.1 25836 D 554290 CDS YP_002140870.1 197361235 28458..29465 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 29465 554290000024 SSPA0022 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002140870.1 28458 D 554290 CDS YP_002140871.1 197361236 29466..30011 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 30011 554290000025 SSPA0023 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002140871.1 29466 D 554290 CDS YP_002140872.1 197361237 30538..31242 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone; fimbrial chaperone 31242 554290000027 SSPA0024 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone YP_002140872.1 30538 D 554290 CDS YP_002140873.1 197361238 31307..32152 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 32152 554290000028 SSPA0025 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140873.1 31307 D 554290 CDS YP_002140874.1 197361239 32191..32478 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 32478 554290000029 SSPA0026 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140874.1 32191 D 554290 CDS YP_002140875.1 197361240 complement(32578..33027) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 33027 554290000030 SSPA0027 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140875.1 32578 R 554290 CDS YP_002140876.1 197361241 33397..34392 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator (lysR family); transcriptional regulator 34392 554290000031 SSPA0028 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002140876.1 33397 D 554290 CDS YP_002140877.1 197361242 complement(34409..34846) 1 NC_011147.1 similar to Salmonella typhimurium transcription regulator; transcriptional regulator 34846 554290000032 SSPA0029 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002140877.1 34409 R 554290 CDS YP_002140878.1 197361243 35369..37087 1 NC_011147.1 similar to Salmonella typhi CT18 possible sulfatase; sulfatase 37087 554290000033 SSPA0030 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfatase YP_002140878.1 35369 D 554290 CDS YP_002140879.1 197361244 complement(37133..38704) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted 5'-nucleotidase; secreted 5'-nucleotidase 38704 554290000034 SSPA0031 Salmonella enterica subsp. enterica serovar Paratyphi A str. secreted 5'-nucleotidase YP_002140879.1 37133 R 554290 CDS YP_002140880.1 197361245 complement(38803..39564) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 39564 554290000035 SSPA0032 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140880.1 38803 R 554290 CDS YP_002140881.1 197361246 41732..42919 1 NC_011147.1 similar to Salmonella typhi CT18 possible sulfatase regulatory protein; sulfatase regulatory protein 42919 554290000037 SSPA0033 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfatase regulatory protein YP_002140881.1 41732 D 554290 CDS YP_002140882.1 197361247 42944..44191 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 44191 554290000038 SSPA0034 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140882.1 42944 D 554290 CDS YP_002140883.1 197361248 44318..46033 1 NC_011147.1 similar to Salmonella typhi CT18 possible sulfatase; sulfatase 46033 554290000039 SSPA0035 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfatase YP_002140883.1 44318 D 554290 CDS YP_002140884.1 197361249 46196..47362 1 NC_011147.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 47362 nhaA 554290000040 nhaA Salmonella enterica subsp. enterica serovar Paratyphi A str. pH-dependent sodium/proton antiporter YP_002140884.1 46196 D 554290 CDS YP_002140885.1 197361250 47424..48323 1 NC_011147.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 48323 nhaR 554290000041 nhaR Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator NhaR YP_002140885.1 47424 D 554290 CDS YP_002140886.1 197361251 complement(48402..50432) 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyl hydrolase; glycosyl hydrolase 50432 554290000042 SSPA0038 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl hydrolase YP_002140886.1 48402 R 554290 CDS YP_002140887.1 197361252 complement(50457..51830) 1 NC_011147.1 similar to Salmonella typhi CT18 transport protein; transporter 51830 554290000043 SSPA0039 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002140887.1 50457 R 554290 CDS YP_002140888.1 197361253 complement(52286..52549) 1 NC_011147.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 52549 rpsT 554290000044 rpsT Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S20 YP_002140888.1 52286 R 554290 CDS YP_002140889.1 197361254 52655..52870 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 52870 554290000045 SSPA0041 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140889.1 52655 D 554290 CDS YP_002140890.1 197361255 52878..53816 1 NC_011147.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 53816 554290000046 SSPA0042 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional riboflavin kinase/FMN adenylyltransferase YP_002140890.1 52878 D 554290 CDS YP_002140891.1 197361256 53861..56695 1 NC_011147.1 'IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme'; isoleucyl-tRNA synthetase 56695 ileS 554290000047 ileS Salmonella enterica subsp. enterica serovar Paratyphi A str. isoleucyl-tRNA synthetase YP_002140891.1 53861 D 554290 CDS YP_002140892.1 197361257 56695..57195 1 NC_011147.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 57195 lspA 554290000048 lspA Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein signal peptidase YP_002140892.1 56695 D 554290 CDS YP_002140893.1 197361258 57350..57799 1 NC_011147.1 similar to Salmonella typhi Ty2 probable FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase; FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase 57799 554290000049 SSPA0045 Salmonella enterica subsp. enterica serovar Paratyphi A str. FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase YP_002140893.1 57350 D 554290 CDS YP_002140894.1 197361259 57802..58752 1 NC_011147.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 58752 ispH 554290000050 ispH Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002140894.1 57802 D 554290 CDS YP_002140895.1 197361260 58952..60154 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 60154 554290000051 SSPA0047 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140895.1 58952 D 554290 CDS YP_002140896.1 197361261 60170..61084 1 NC_011147.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC 61084 554290000052 SSPA0048 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleoside hydrolase RihC YP_002140896.1 60170 D 554290 CDS YP_002140897.1 197361262 complement(61106..61792) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulatory protein citb; transcriptional regulatory protein citb 61792 554290000053 SSPA0049 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulatory protein citb YP_002140897.1 61106 R 554290 CDS YP_002140898.1 197361263 complement(61794..63413) 1 NC_011147.1 similar to Salmonella typhi CT18 sensor kinase cita; transcriptional regulator 63413 554290000054 SSPA0050 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002140898.1 61794 R 554290 CDS YP_002140899.1 197361264 complement(63548..64831) 1 NC_011147.1 similar to Salmonella typhi CT18 oxaloacetate decarboxylase beta chain; oxaloacetate decarboxylase subunit beta 64831 554290000055 SSPA0051 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxaloacetate decarboxylase subunit beta YP_002140899.1 63548 R 554290 CDS YP_002140900.1 197361265 complement(64844..66610) 1 NC_011147.1 catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 66610 oadA 554290000056 oadA Salmonella enterica subsp. enterica serovar Paratyphi A str. oxaloacetate decarboxylase YP_002140900.1 64844 R 554290 CDS YP_002140901.1 197361266 complement(66626..66865) 1 NC_011147.1 catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide; oxaloacetate decarboxylase subunit gamma 66865 554290000057 SSPA0054 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxaloacetate decarboxylase subunit gamma YP_002140901.1 66626 R 554290 CDS YP_002140902.1 197361267 complement(67024..68364) 1 NC_011147.1 similar to Salmonella typhi CT18 citrate-sodium symporter; citrate-sodium symporter 68364 554290000058 SSPA0055 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate-sodium symporter YP_002140902.1 67024 R 554290 CDS YP_002140903.1 197361268 68609..69652 1 NC_011147.1 similar to Salmonella typhi Ty2 [citrate (PRO-3S)-lyase] ligase; [citrate (pro-3S)-lyase] ligase 69652 554290000059 SSPA0056 Salmonella enterica subsp. enterica serovar Paratyphi A str. [citrate (pro-3S)-lyase] ligase YP_002140903.1 68609 D 554290 CDS YP_002140904.1 197361269 69682..69975 1 NC_011147.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 69975 554290000060 SSPA0057 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate lyase subunit gamma YP_002140904.1 69682 D 554290 CDS YP_002140905.1 197361270 69972..70841 1 NC_011147.1 similar to Salmonella typhi Ty2 citrate lyase beta chain; citrate lyase subunit beta 70841 554290000061 SSPA0058 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate lyase subunit beta YP_002140905.1 69972 D 554290 CDS YP_002140906.1 197361271 70852..72372 1 NC_011147.1 similar to Salmonella typhi Ty2 citrate lyase alpha chain; citrate lyase subunit alpha 72372 554290000062 SSPA0059 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate lyase subunit alpha YP_002140906.1 70852 D 554290 CDS YP_002140907.1 197361272 72372..72923 1 NC_011147.1 similar to Salmonella typhi Ty2 citx protein; hypothetical protein 72923 554290000063 SSPA0060 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140907.1 72372 D 554290 CDS YP_002140908.1 197361273 72901..73809 1 NC_011147.1 similar to Salmonella typhi Ty2 CitG protein; CitG protein 73809 554290000064 SSPA0061 Salmonella enterica subsp. enterica serovar Paratyphi A str. CitG protein YP_002140908.1 72901 D 554290 CDS YP_002140909.1 197361274 73989..74810 1 NC_011147.1 'catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis'; dihydrodipicolinate reductase 74810 554290000065 SSPA0062 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydrodipicolinate reductase YP_002140909.1 73989 D 554290 CDS YP_002140910.1 197361275 75671..76819 1 NC_011147.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 76819 554290000067 SSPA0063 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbamoyl phosphate synthase small subunit YP_002140910.1 75671 D 554290 CDS YP_002140911.1 197361276 76838..80065 1 NC_011147.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 80065 carB 554290000068 carB Salmonella enterica subsp. enterica serovar Paratyphi A str. carbamoyl phosphate synthase large subunit YP_002140911.1 76838 D 554290 CDS YP_002140912.1 197361277 80339..80734 1 NC_011147.1 regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons; DNA-binding transcriptional activator CaiF 80734 554290000069 SSPA0065 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator CaiF YP_002140912.1 80339 D 554290 CDS YP_002140913.1 197361278 complement(80812..81408) 1 NC_011147.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; carnitine operon protein CaiE 81408 554290000070 SSPA0066 Salmonella enterica subsp. enterica serovar Paratyphi A str. carnitine operon protein CaiE YP_002140913.1 80812 R 554290 CDS YP_002140914.1 197361279 complement(81519..82304) 1 NC_011147.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase 82304 554290000071 SSPA0067 Salmonella enterica subsp. enterica serovar Paratyphi A str. carnitinyl-CoA dehydratase YP_002140914.1 81519 R 554290 CDS YP_002140915.1 197361280 complement(82358..83911) 1 NC_011147.1 similar to Salmonella typhi CT18 probable crotonobetaine/carnitine-CoA ligase; crotonobetaine/carnitine-CoA ligase 83911 caiC 554290000072 caiC Salmonella enterica subsp. enterica serovar Paratyphi A str. crotonobetaine/carnitine-CoA ligase YP_002140915.1 82358 R 554290 CDS YP_002140916.1 197361281 complement(83974..85191) 1 NC_011147.1 'catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine'; crotonobetainyl-CoA:carnitine CoA-transferase 85191 554290000073 SSPA0069 Salmonella enterica subsp. enterica serovar Paratyphi A str. crotonobetainyl-CoA:carnitine CoA-transferase YP_002140916.1 83974 R 554290 CDS YP_002140917.1 197361282 complement(85303..86445) 1 NC_011147.1 catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; crotonobetainyl-CoA dehydrogenase 86445 554290000074 SSPA0070 Salmonella enterica subsp. enterica serovar Paratyphi A str. crotonobetainyl-CoA dehydrogenase YP_002140917.1 85303 R 554290 CDS YP_002140918.1 197361283 complement(86480..87997) 1 NC_011147.1 catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; L-carnitine/gamma-butyrobetaine antiporter 87997 554290000075 SSPA0071 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-carnitine/gamma-butyrobetaine antiporter YP_002140918.1 86480 R 554290 CDS YP_002140919.1 197361284 88487..89257 1 NC_011147.1 'required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase'; electron transfer flavoprotein FixA 89257 554290000076 SSPA0072 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transfer flavoprotein FixA YP_002140919.1 88487 D 554290 CDS YP_002140920.1 197361285 89273..90214 1 NC_011147.1 involved in electron transfer during carnitine metabolism; electron transfer flavoprotein FixB 90214 fixB 554290000077 fixB Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transfer flavoprotein FixB YP_002140920.1 89273 D 554290 CDS YP_002140921.1 197361286 90264..91550 1 NC_011147.1 FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; oxidoreductase FixC 91550 554290000078 SSPA0074 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase FixC YP_002140921.1 90264 D 554290 CDS YP_002140922.1 197361287 91547..91834 1 NC_011147.1 similar to Salmonella typhi CT18 ferredoxin like protein FixX; ferredoxin like protein FixX 91834 554290000079 SSPA0075 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferredoxin like protein FixX YP_002140922.1 91547 D 554290 CDS YP_002140923.1 197361288 91982..93322 1 NC_011147.1 similar to Salmonella typhi CT18 metabolite transport protein; metabolite transport protein 93322 554290000080 SSPA0076 Salmonella enterica subsp. enterica serovar Paratyphi A str. metabolite transport protein YP_002140923.1 91982 D 554290 CDS YP_002140924.1 197361289 93411..93641 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 93641 554290000081 SSPA0077 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002140924.1 93411 D 554290 CDS YP_002140925.1 197361290 93913..94335 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 94335 554290000082 SSPA0078 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140925.1 93913 D 554290 CDS YP_002140926.1 197361291 complement(94559..94849) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 94849 554290000083 SSPA0079 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140926.1 94559 R 554290 CDS YP_002140927.1 197361292 95059..95253 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 95253 554290000084 SSPA0080 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140927.1 95059 D 554290 CDS YP_002140928.1 197361293 95747..97636 1 NC_011147.1 similar to Salmonella typhimurium sulfatase; sulfatase 97636 554290000085 SSPA0081 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfatase YP_002140928.1 95747 D 554290 CDS YP_002140929.1 197361294 98714..100576 1 NC_011147.1 transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 100576 554290000087 SSPA0082 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione-regulated potassium-efflux system protein KefC YP_002140929.1 98714 D 554290 CDS YP_002140930.1 197361295 100775..101254 1 NC_011147.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 101254 folA 554290000088 folA Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydrofolate reductase YP_002140930.1 100775 D 554290 CDS YP_002140931.1 197361296 complement(101360..102208) 1 NC_011147.1 'hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP'; diadenosine tetraphosphatase 102208 apaH 554290000089 apaH Salmonella enterica subsp. enterica serovar Paratyphi A str. diadenosine tetraphosphatase YP_002140931.1 101360 R 554290 CDS YP_002140932.1 197361297 complement(102219..102596) 1 NC_011147.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 102596 apaG 554290000090 apaG Salmonella enterica subsp. enterica serovar Paratyphi A str. ApaG protein YP_002140932.1 102219 R 554290 CDS YP_002140933.1 197361298 complement(102599..103420) 1 NC_011147.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 103420 ksgA 554290000091 ksgA Salmonella enterica subsp. enterica serovar Paratyphi A str. dimethyladenosine transferase YP_002140933.1 102599 R 554290 CDS YP_002140934.1 197361299 complement(103417..104406) 1 NC_011147.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 104406 pdxA 554290000092 pdxA Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxythreonine-4-phosphate dehydrogenase YP_002140934.1 103417 R 554290 CDS YP_002140935.1 197361300 complement(104406..105692) 1 NC_011147.1 'Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB'; peptidyl-prolyl cis-trans isomerase SurA 105692 554290000093 SSPA0089 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-prolyl cis-trans isomerase SurA YP_002140935.1 104406 R 554290 CDS YP_002140936.1 197361301 complement(105746..108100) 1 NC_011147.1 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 108100 554290000094 SSPA0090 Salmonella enterica subsp. enterica serovar Paratyphi A str. organic solvent tolerance protein YP_002140936.1 105746 R 554290 CDS YP_002140937.1 197361302 108354..109166 1 NC_011147.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 109166 djlA 554290000095 djlA Salmonella enterica subsp. enterica serovar Paratyphi A str. Dna-J like membrane chaperone protein YP_002140937.1 108354 D 554290 CDS YP_002140938.1 197361303 complement(109261..109920) 1 NC_011147.1 catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; 23S rRNA/tRNA pseudouridine synthase A 109920 554290000096 SSPA0092 Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA/tRNA pseudouridine synthase A YP_002140938.1 109261 R 554290 CDS YP_002140939.1 197361304 complement(109932..112838) 1 NC_011147.1 'transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA'; ATP-dependent helicase HepA 112838 554290000097 SSPA0093 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent helicase HepA YP_002140939.1 109932 R 554290 CDS YP_002140940.1 197361305 complement(113012..115363) 1 NC_011147.1 'Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C'; DNA polymerase II 115363 554290000098 SSPA0094 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase II YP_002140940.1 113012 R 554290 CDS YP_002140941.1 197361306 complement(115703..116143) 1 NC_011147.1 similar to Salmonella typhi CT18 IS element transposase; IS element transposase 116143 554290000099 SSPA0095 Salmonella enterica subsp. enterica serovar Paratyphi A str. IS element transposase YP_002140941.1 115703 R 554290 CDS YP_002140942.1 197361307 116163..117371 1 NC_011147.1 similar to Salmonella typhi CT18 IS element transposase; IS element transposase 117371 554290000100 SSPA0096 Salmonella enterica subsp. enterica serovar Paratyphi A str. IS element transposase YP_002140942.1 116163 D 554290 CDS YP_002140943.1 197361308 118363..118782 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 118782 554290000101 SSPA0098 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140943.1 118363 D 554290 CDS YP_002140944.1 197361309 complement(118788..119483) 1 NC_011147.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 119483 araD 554290000102 araD Salmonella enterica subsp. enterica serovar Paratyphi A str. L-ribulose-5-phosphate 4-epimerase YP_002140944.1 118788 R 554290 CDS YP_002140945.1 197361310 complement(119624..121126) 1 NC_011147.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 121126 554290000103 SSPA0100 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-arabinose isomerase YP_002140945.1 119624 R 554290 CDS YP_002140946.1 197361311 complement(121137..122846) 1 NC_011147.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 122846 554290000104 SSPA0101 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribulokinase YP_002140946.1 121137 R 554290 CDS YP_002140947.1 197361312 123187..124032 1 NC_011147.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 124032 554290000105 SSPA0102 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator AraC YP_002140947.1 123187 D 554290 CDS YP_002140948.1 197361313 124151..124918 1 NC_011147.1 similar to Salmonella typhi CT18 DedA family integral membrane protein; DedA family integral membrane protein 124918 554290000106 SSPA0103 Salmonella enterica subsp. enterica serovar Paratyphi A str. DedA family integral membrane protein YP_002140948.1 124151 D 554290 CDS YP_002140949.1 197361314 complement(124957..125664) 1 NC_011147.1 with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit 125664 thiQ 554290000107 thiQ Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine transporter ATP-binding subunit YP_002140949.1 124957 R 554290 CDS YP_002140950.1 197361315 complement(125648..127255) 1 NC_011147.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 127255 thiP 554290000108 thiP Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine transporter membrane protein YP_002140950.1 125648 R 554290 CDS YP_002140951.2 449784910 complement(127231..128214) 1 NC_011147.1 similar to Salmonella typhi CT18 thiamine-binding periplasmic protein precursor; thiamine-binding periplasmic protein 128214 554290000109 SSPA0106 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine-binding periplasmic protein YP_002140951.2 127231 R 554290 CDS YP_002140952.1 197361317 complement(128392..130050) 1 NC_011147.1 activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 130050 554290000110 SSPA0107 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator SgrR YP_002140952.1 128392 R 554290 CDS YP_002140953.1 197361318 complement(130601..131206) 1 NC_011147.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 131206 leuD 554290000111 leuD Salmonella enterica subsp. enterica serovar Paratyphi A str. isopropylmalate isomerase small subunit YP_002140953.1 130601 R 554290 CDS YP_002140954.1 197361319 complement(131217..132617) 1 NC_011147.1 'dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate'; isopropylmalate isomerase large subunit 132617 554290000112 SSPA0109 Salmonella enterica subsp. enterica serovar Paratyphi A str. isopropylmalate isomerase large subunit YP_002140954.1 131217 R 554290 CDS YP_002140955.1 197361320 complement(132620..133711) 1 NC_011147.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 133711 554290000113 SSPA0110 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-isopropylmalate dehydrogenase YP_002140955.1 132620 R 554290 CDS YP_002140956.1 197361321 complement(133711..135282) 1 NC_011147.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 135282 554290000114 SSPA0111 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-isopropylmalate synthase YP_002140956.1 133711 R 554290 CDS YP_002140957.1 197361322 complement(135370..135456) 1 NC_011147.1 involved in attenuation control of the leuABCD operon in leucine biosynthesis; leu operon leader peptide 135456 554290000115 SSPA0112 Salmonella enterica subsp. enterica serovar Paratyphi A str. leu operon leader peptide YP_002140957.1 135370 R 554290 CDS YP_002140958.1 197361323 136113..137057 1 NC_011147.1 activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator 137057 leuO 554290000116 leuO Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine transcriptional activator YP_002140958.1 136113 D 554290 CDS YP_002140959.1 197361324 137385..139103 1 NC_011147.1 'catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive'; acetolactate synthase 3 catalytic subunit 139103 554290000117 SSPA0114 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetolactate synthase 3 catalytic subunit YP_002140959.1 137385 D 554290 CDS YP_002140960.1 197361325 139103..139597 1 NC_011147.1 'with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit'; acetolactate synthase 3 regulatory subunit 139597 ilvH 554290000118 ilvH Salmonella enterica subsp. enterica serovar Paratyphi A str. acetolactate synthase 3 regulatory subunit YP_002140960.1 139103 D 554290 CDS YP_002140961.1 197361326 139881..140885 1 NC_011147.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 140885 554290000119 SSPA0116 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator FruR YP_002140961.1 139881 D 554290 CDS YP_002140962.1 197361327 141491..141949 1 NC_011147.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 141949 554290000120 SSPA0117 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein MraZ YP_002140962.1 141491 D 554290 CDS YP_002140963.1 197361328 141951..142892 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; S-adenosyl-methyltransferase MraW 142892 mraW 554290000121 mraW Salmonella enterica subsp. enterica serovar Paratyphi A str. S-adenosyl-methyltransferase MraW YP_002140963.1 141951 D 554290 CDS YP_002140964.1 197361329 142889..143254 1 NC_011147.1 membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 143254 554290000122 SSPA0119 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsL YP_002140964.1 142889 D 554290 CDS YP_002140965.1 197361330 143270..145036 1 NC_011147.1 similar to Salmonella typhi CT18 penicillin-binding protein 3 precursor; penicillin-binding protein 3 145036 554290000123 SSPA0120 Salmonella enterica subsp. enterica serovar Paratyphi A str. penicillin-binding protein 3 YP_002140965.1 143270 D 554290 CDS YP_002140966.1 197361331 145023..146510 1 NC_011147.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 146510 murE 554290000124 murE Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002140966.1 145023 D 554290 CDS YP_002140967.1 197361332 146507..147865 1 NC_011147.1 'similar to Salmonella typhi CT18 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alan alanyl ligase'; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 147865 murF 554290000125 murF Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_002140967.1 146507 D 554290 CDS YP_002140968.1 197361333 147859..148941 1 NC_011147.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 148941 mraY 554290000126 mraY Salmonella enterica subsp. enterica serovar Paratyphi A str. phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002140968.1 147859 D 554290 CDS YP_002140969.1 197361334 148944..150260 1 NC_011147.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 150260 murD 554290000127 murD Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002140969.1 148944 D 554290 CDS YP_002140970.2 449784911 150260..151504 1 NC_011147.1 integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 151504 554290000128 SSPA0125 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsW YP_002140970.2 150260 D 554290 CDS YP_002140971.1 197361336 151501..152568 1 NC_011147.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 152568 murG 554290000129 murG Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_002140971.1 151501 D 554290 CDS YP_002140972.1 197361337 152687..154162 1 NC_011147.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 154162 murC 554290000130 murC Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylmuramate--L-alanine ligase YP_002140972.1 152687 D 554290 CDS YP_002140973.1 197361338 154155..155075 1 NC_011147.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 155075 ddl 554290000131 ddl Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanine--D-alanine ligase YP_002140973.1 154155 D 554290 CDS YP_002140974.1 197361339 155077..155907 1 NC_011147.1 involved in septum formation; cell division protein FtsQ 155907 554290000132 SSPA0129 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsQ YP_002140974.1 155077 D 554290 CDS YP_002140975.1 197361340 155904..157166 1 NC_011147.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 157166 ftsA 554290000133 ftsA Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsA YP_002140975.1 155904 D 554290 CDS YP_002140976.1 197361341 157227..158378 1 NC_011147.1 'GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function'; cell division protein FtsZ 158378 554290000134 SSPA0131 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsZ YP_002140976.1 157227 D 554290 CDS YP_002140977.1 197361342 158479..159396 1 NC_011147.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 159396 lpxC 554290000135 lpxC Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002140977.1 158479 D 554290 CDS YP_002140978.2 449784912 159675..160172 1 NC_011147.1 secM translational pause allows for the initiation of secA translation; SecA regulator SecM 160172 554290000136 SSPA0133 Salmonella enterica subsp. enterica serovar Paratyphi A str. SecA regulator SecM YP_002140978.2 159675 D 554290 CDS YP_002140979.1 197361344 160234..162939 1 NC_011147.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 162939 554290000137 SSPA0134 Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecA YP_002140979.1 160234 D 554290 CDS YP_002140980.1 197361345 163091..163486 1 NC_011147.1 'similar to Salmonella typhi CT18 7,8-dihydro-8-oxoguanine-triphosphatase'; nucleoside triphosphate pyrophosphohydrolase 163486 554290000138 SSPA0135 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside triphosphate pyrophosphohydrolase YP_002140980.1 163091 D 554290 CDS YP_002140981.1 197361346 complement(163520..164509) 1 NC_011147.1 similar to Salmonella typhi CT18 aldo/keto reductase; aldo/keto reductase 164509 554290000139 SSPA0136 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldo/keto reductase YP_002140981.1 163520 R 554290 CDS YP_002140982.1 197361347 164595..165536 1 NC_011147.1 similar to Salmonella typhi Ty2 LysR-family transcriptional regulator; LysR family transcriptional regulator 165536 554290000140 SSPA0137 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002140982.1 164595 D 554290 CDS YP_002140983.1 197361348 complement(165533..165724) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; zinc-binding protein 165724 554290000141 SSPA0138 Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc-binding protein YP_002140983.1 165533 R 554290 CDS YP_002140984.1 197361349 complement(165734..166477) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 166477 554290000142 SSPA0139 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140984.1 165734 R 554290 CDS YP_002140985.1 197361350 complement(166477..167097) 1 NC_011147.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 167097 coaE 554290000143 coaE Salmonella enterica subsp. enterica serovar Paratyphi A str. dephospho-CoA kinase YP_002140985.1 166477 R 554290 CDS YP_002140986.1 197361351 167323..168366 1 NC_011147.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 168366 554290000144 SSPA0141 Salmonella enterica subsp. enterica serovar Paratyphi A str. guanosine 5'-monophosphate oxidoreductase YP_002140986.1 167323 D 554290 CDS YP_002140987.1 197361352 complement(168397..169599) 1 NC_011147.1 similar to Salmonella typhi CT18 protein transport protein HofC; type IV pilin biogenesis protein 169599 554290000145 SSPA0142 Salmonella enterica subsp. enterica serovar Paratyphi A str. type IV pilin biogenesis protein YP_002140987.1 168397 R 554290 CDS YP_002140988.1 197361353 complement(169589..170974) 1 NC_011147.1 similar to Salmonella typhi CT18 protein transport protein HofB; hypothetical protein 170974 554290000146 SSPA0143 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002140988.1 169589 R 554290 CDS YP_002140989.1 197361354 complement(170984..171421) 1 NC_011147.1 similar to Salmonella typhi CT18 prepilin peptidase dependent protein D precursor; major pilin subunit 171421 554290000147 SSPA0144 Salmonella enterica subsp. enterica serovar Paratyphi A str. major pilin subunit YP_002140989.1 170984 R 554290 CDS YP_002140990.2 449784913 complement(171643..172536) 1 NC_011147.1 similar to Salmonella typhi CT18 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 172536 554290000148 SSPA0145 Salmonella enterica subsp. enterica serovar Paratyphi A str. nicotinate-nucleotide pyrophosphorylase YP_002140990.2 171643 R 554290 CDS YP_002140991.1 197361356 172624..173187 1 NC_011147.1 similar to Salmonella typhi CT18 AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase); N-acetyl-anhydromuranmyl-L-alanine amidase 173187 554290000149 SSPA0146 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetyl-anhydromuranmyl-L-alanine amidase YP_002140991.1 172624 D 554290 CDS YP_002140992.1 197361357 173184..174038 1 NC_011147.1 involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 174038 554290000150 SSPA0147 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein AmpE YP_002140992.1 173184 D 554290 CDS YP_002140993.1 197361358 complement(174130..175080) 1 NC_011147.1 similar to Salmonella typhi CT18 putatuve glycosysl hydrolase; glycosyl hydrolase 175080 554290000151 SSPA0148 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl hydrolase YP_002140993.1 174130 R 554290 CDS YP_002140994.1 197361359 complement(175080..176486) 1 NC_011147.1 similar to Salmonella typhi CT18 symporter; symporter 176486 554290000152 SSPA0149 Salmonella enterica subsp. enterica serovar Paratyphi A str. symporter YP_002140994.1 175080 R 554290 CDS YP_002140995.1 197361360 complement(176650..178020) 1 NC_011147.1 similar to Salmonella typhi CT18 aromatic amino acid transport protein AroP; aromatic amino acid transporter 178020 554290000153 SSPA0150 Salmonella enterica subsp. enterica serovar Paratyphi A str. aromatic amino acid transporter YP_002140995.1 176650 R 554290 CDS YP_002140996.1 197361361 178586..179350 1 NC_011147.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 179350 pdhR 554290000154 pdhR Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator PdhR YP_002140996.1 178586 D 554290 CDS YP_002140997.1 197361362 179510..182173 1 NC_011147.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 182173 aceE 554290000155 aceE Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate dehydrogenase subunit E1 YP_002140997.1 179510 D 554290 CDS YP_002140998.1 197361363 182188..184077 1 NC_011147.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 184077 aceF 554290000156 aceF Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydrolipoamide acetyltransferase YP_002140998.1 182188 D 554290 CDS YP_002140999.1 197361364 184279..185703 1 NC_011147.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 185703 554290000157 SSPA0154 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydrolipoamide dehydrogenase YP_002140999.1 184279 D 554290 CDS YP_002141000.1 197361365 185992..186276 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 186276 554290000158 SSPA0155 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141000.1 185992 D 554290 CDS YP_002141001.1 197361366 complement(186314..187105) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 187105 554290000159 SSPA0156 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141001.1 186314 R 554290 CDS YP_002141002.1 197361367 complement(187118..188746) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 188746 554290000160 SSPA0157 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141002.1 187118 R 554290 CDS YP_002141003.1 197361368 189135..191732 1 NC_011147.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 191732 554290000161 SSPA0158 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_002141003.1 189135 D 554290 CDS YP_002141004.1 197361369 191920..192282 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 192282 554290000162 SSPA0159 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141004.1 191920 D 554290 CDS YP_002141005.1 197361370 192517..193470 1 NC_011147.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 193470 554290000163 SSPA0160 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-keto-3-deoxygluconate permease YP_002141005.1 192517 D 554290 CDS YP_002141006.1 197361371 193467..194738 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 194738 554290000164 SSPA0161 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141006.1 193467 D 554290 CDS YP_002141007.1 197361372 194728..195711 1 NC_011147.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 195711 pdxA 554290000165 pdxA Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxythreonine-4-phosphate dehydrogenase YP_002141007.1 194728 D 554290 CDS YP_002141008.1 197361373 195721..196488 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 196488 554290000166 SSPA0163 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141008.1 195721 D 554290 CDS YP_002141009.1 197361374 complement(196518..197312) 1 NC_011147.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 197312 speD 554290000167 speD Salmonella enterica subsp. enterica serovar Paratyphi A str. S-adenosylmethionine decarboxylase YP_002141009.1 196518 R 554290 CDS YP_002141010.1 197361375 complement(197333..198193) 1 NC_011147.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 198193 554290000168 SSPA0165 Salmonella enterica subsp. enterica serovar Paratyphi A str. spermidine synthase YP_002141010.1 197333 R 554290 CDS YP_002141011.1 197361376 complement(198300..198647) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 198647 554290000169 SSPA0166 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141011.1 198300 R 554290 CDS YP_002141012.1 197361377 198849..200459 1 NC_011147.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 200459 554290000170 SSPA0167 Salmonella enterica subsp. enterica serovar Paratyphi A str. multicopper oxidase YP_002141012.1 198849 D 554290 CDS YP_002141013.1 197361378 complement(200537..202927) 1 NC_011147.1 similar to Salmonella typhi CT18 glucose dehydrogenase; glucose dehydrogenase 202927 554290000171 SSPA0168 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose dehydrogenase YP_002141013.1 200537 R 554290 CDS YP_002141014.1 197361379 203133..203669 1 NC_011147.1 similar to Salmonella typhi CT18 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 203669 554290000172 SSPA0169 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypoxanthine phosphoribosyltransferase YP_002141014.1 203133 D 554290 CDS YP_002141015.1 197361380 complement(203727..204389) 1 NC_011147.1 catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase 204389 554290000173 SSPA0170 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbonic anhydrase YP_002141015.1 203727 R 554290 CDS YP_002141016.1 197361381 204498..205424 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; hypothetical protein 205424 554290000174 SSPA0171 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141016.1 204498 D 554290 CDS YP_002141017.1 197361382 205421..206191 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter integral membrane protein; ABC transporter 206191 554290000175 SSPA0172 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter YP_002141017.1 205421 D 554290 CDS YP_002141018.1 197361383 206296..206736 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system IIA component; PTS system transporter subunit IIA 206736 554290000176 SSPA0173 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system transporter subunit IIA YP_002141018.1 206296 D 554290 CDS YP_002141019.1 197361384 206804..208027 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 208027 554290000177 SSPA0174 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141019.1 206804 D 554290 CDS YP_002141020.1 197361385 complement(208029..209090) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 209090 554290000178 SSPA0175 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002141020.1 208029 R 554290 CDS YP_002141021.1 197361386 complement(209102..209662) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 209662 554290000179 SSPA0176 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002141021.1 209102 R 554290 CDS YP_002141022.1 197361387 complement(209720..210277) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 210277 554290000180 SSPA0177 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002141022.1 209720 R 554290 CDS YP_002141023.1 197361388 complement(210304..210876) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 210876 554290000181 SSPA0178 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002141023.1 210304 R 554290 CDS YP_002141024.1 197361389 complement(210911..213508) 1 NC_011147.1 similar to the fimbrial usher protein PapC; outer membrane usher protein 213508 554290000182 SSPA0179 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane usher protein YP_002141024.1 210911 R 554290 CDS YP_002141025.1 197361390 complement(213576..214328) 1 NC_011147.1 similar to Salmonella typhimurium fimbriae; chaparone; chaperone protein EcpD 214328 554290000183 SSPA0180 Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone protein EcpD YP_002141025.1 213576 R 554290 CDS YP_002141026.1 197361391 complement(214415..215020) 1 NC_011147.1 similar to |24528001|emb|CAD33728.1| F17-like fimbrial subunit [Escherichia coli]; major fimbrial subunit 215020 554290000184 SSPA0181 Salmonella enterica subsp. enterica serovar Paratyphi A str. major fimbrial subunit YP_002141026.1 214415 R 554290 CDS YP_002141027.1 197361392 complement(215297..215677) 1 NC_011147.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 215677 554290000185 SSPA0182 Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate alpha-decarboxylase YP_002141027.1 215297 R 554290 CDS YP_002141028.1 197361393 complement(215772..216626) 1 NC_011147.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 216626 panC 554290000186 panC Salmonella enterica subsp. enterica serovar Paratyphi A str. pantoate--beta-alanine ligase YP_002141028.1 215772 R 554290 CDS YP_002141029.1 197361394 complement(216752..217543) 1 NC_011147.1 'catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate'; 3-methyl-2-oxobutanoate hydroxymethyltransferase 217543 panB 554290000187 panB Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002141029.1 216752 R 554290 CDS YP_002141030.1 197361395 complement(217664..218143) 1 NC_011147.1 'catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP'; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 218143 554290000188 SSPA0185 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_002141030.1 217664 R 554290 CDS YP_002141031.1 197361396 complement(218140..219558) 1 NC_011147.1 Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I 219558 pcnB 554290000189 pcnB Salmonella enterica subsp. enterica serovar Paratyphi A str. poly(A) polymerase I YP_002141031.1 218140 R 554290 CDS YP_002141032.1 197361397 complement(219699..220595) 1 NC_011147.1 'this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu'; glutamyl-Q tRNA(Asp) synthetase 220595 554290000190 SSPA0187 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamyl-Q tRNA(Asp) synthetase YP_002141032.1 219699 R 554290 CDS YP_002141033.1 197361398 complement(220664..221119) 1 NC_011147.1 similar to Salmonella typhi CT18 dosage-dependent dnaK suppressor protein; RNA polymerase-binding transcription factor 221119 dksA 554290000191 dksA Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA polymerase-binding transcription factor YP_002141033.1 220664 R 554290 CDS YP_002141034.1 197361399 complement(221296..222000) 1 NC_011147.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 222000 554290000192 SSPA0189 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar fermentation stimulation protein A YP_002141034.1 221296 R 554290 CDS YP_002141035.1 197361400 complement(222017..222547) 1 NC_011147.1 similar to Salmonella typhi CT18 2'-5' RNA ligase; 2'-5' RNA ligase 222547 554290000193 SSPA0190 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2'-5' RNA ligase YP_002141035.1 222017 R 554290 CDS YP_002141036.1 197361401 222575..225049 1 NC_011147.1 similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 225049 554290000194 SSPA0191 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase HrpB YP_002141036.1 222575 D 554290 CDS YP_002141037.1 197361402 225190..227712 1 NC_011147.1 'bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell'; penicillin-binding protein 1b 227712 mrcB 554290000195 mrcB Salmonella enterica subsp. enterica serovar Paratyphi A str. penicillin-binding protein 1b YP_002141037.1 225190 D 554290 CDS YP_002141038.1 197361403 230281..231078 1 NC_011147.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 231078 554290000197 SSPA0193 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-hydroxamate transporter ATP-binding subunit YP_002141038.1 230281 D 554290 CDS YP_002141039.1 197361404 231078..231968 1 NC_011147.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 231968 554290000198 SSPA0194 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-hydroxamate transporter substrate-binding subunit YP_002141039.1 231078 D 554290 CDS YP_002141040.1 197361405 231965..234022 1 NC_011147.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease 234022 554290000199 SSPA0195 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-hydroxamate transporter permease YP_002141040.1 231965 D 554290 CDS YP_002141042.1 197361406 238284..239036 1 NC_011147.1 similar to Salmonella typhimurium periplasmic fimbrial chaperone; periplasmic fimbrial chaperone 239036 554290000201 SSPA0197 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic fimbrial chaperone YP_002141042.1 238284 D 554290 CDS YP_002141043.1 197361407 239100..239567 1 NC_011147.1 similar to Salmonella typhimurium putaive minor fimbrial subunit; minor fimbrial subunit 239567 554290000202 SSPA0198 Salmonella enterica subsp. enterica serovar Paratyphi A str. minor fimbrial subunit YP_002141043.1 239100 D 554290 CDS YP_002141044.1 197361408 240040..240570 1 NC_011147.1 similar to Salmonella typhimurium minor fimbrial subunit; adhesin; minor fimbrial subunit; adhesin 240570 554290000204 SSPA0199 Salmonella enterica subsp. enterica serovar Paratyphi A str. minor fimbrial subunit; adhesin YP_002141044.1 240040 D 554290 CDS YP_002141045.1 197361409 240570..241415 1 NC_011147.1 similar to |7388520|sp|P76498|YFCO_ECOLI Hypothetical protein yfcO precursor; hypothetical protein 241415 554290000205 SSPA0200 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141045.1 240570 D 554290 CDS YP_002141046.1 197361410 complement(241523..242803) 1 NC_011147.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 242803 554290000206 SSPA0201 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate-1-semialdehyde aminotransferase YP_002141046.1 241523 R 554290 CDS YP_002141047.1 197361411 242973..244394 1 NC_011147.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 244394 554290000207 SSPA0202 Salmonella enterica subsp. enterica serovar Paratyphi A str. chloride channel protein YP_002141047.1 242973 D 554290 CDS YP_002141048.1 197361412 244431..244820 1 NC_011147.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 244820 554290000208 SSPA0203 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-sulfur cluster insertion protein ErpA YP_002141048.1 244431 D 554290 CDS YP_002141049.1 197361413 complement(244921..245544) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 245544 554290000209 SSPA0204 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141049.1 244921 R 554290 CDS YP_002141050.1 197361414 complement(245581..246381) 1 NC_011147.1 solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF 246381 554290000210 SSPA0205 Salmonella enterica subsp. enterica serovar Paratyphi A str. vitamin B12-transporter protein BtuF YP_002141050.1 245581 R 554290 CDS YP_002141051.1 197361415 complement(246374..247072) 1 NC_011147.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 247072 554290000211 SSPA0206 Salmonella enterica subsp. enterica serovar Paratyphi A str. 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002141051.1 246374 R 554290 CDS YP_002141052.1 197361416 247157..248674 1 NC_011147.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 248674 dgt 554290000212 dgt Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxyguanosinetriphosphate triphosphohydrolase YP_002141052.1 247157 D 554290 CDS YP_002141053.1 197361417 248804..250231 1 NC_011147.1 protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 250231 554290000213 SSPA0208 Salmonella enterica subsp. enterica serovar Paratyphi A str. serine endoprotease YP_002141053.1 248804 D 554290 CDS YP_002141054.1 197361418 250384..251541 1 NC_011147.1 'regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization'; carbohydrate diacid transcriptional activator CdaR 251541 554290000214 SSPA0209 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbohydrate diacid transcriptional activator CdaR YP_002141054.1 250384 D 554290 CDS YP_002141055.1 197361419 complement(251630..252016) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 252016 554290000215 SSPA0210 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141055.1 251630 R 554290 CDS YP_002141056.1 197361420 252263..253564 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 253564 554290000216 SSPA0211 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002141056.1 252263 D 554290 CDS YP_002141057.1 197361421 complement(253601..254425) 1 NC_011147.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 254425 dapD 554290000217 dapD Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_002141057.1 253601 R 554290 CDS YP_002141058.1 197361422 complement(254455..257127) 1 NC_011147.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 257127 554290000218 SSPA0213 Salmonella enterica subsp. enterica serovar Paratyphi A str. PII uridylyl-transferase YP_002141058.1 254455 R 554290 CDS YP_002141059.1 197361423 complement(257240..258034) 1 NC_011147.1 'catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn'; methionine aminopeptidase 258034 554290000219 SSPA0214 Salmonella enterica subsp. enterica serovar Paratyphi A str. methionine aminopeptidase YP_002141059.1 257240 R 554290 CDS YP_002141060.1 197361424 258485..259210 1 NC_011147.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 259210 rpsB 554290000221 rpsB Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S2 YP_002141060.1 258485 D 554290 CDS YP_002141061.1 197361425 259468..260319 1 NC_011147.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 260319 tsf 554290000222 tsf Salmonella enterica subsp. enterica serovar Paratyphi A str. elongation factor Ts YP_002141061.1 259468 D 554290 CDS YP_002141062.1 197361426 260464..261189 1 NC_011147.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 261189 pyrH 554290000223 pyrH Salmonella enterica subsp. enterica serovar Paratyphi A str. uridylate kinase YP_002141062.1 260464 D 554290 CDS YP_002141063.1 197361427 261336..261893 1 NC_011147.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 261893 frr 554290000224 frr Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome recycling factor YP_002141063.1 261336 D 554290 CDS YP_002141064.1 197361428 262035..263231 1 NC_011147.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 263231 554290000225 SSPA0219 Salmonella enterica subsp. enterica serovar Paratyphi A str. 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002141064.1 262035 D 554290 CDS YP_002141065.1 197361429 263544..264302 1 NC_011147.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 264302 554290000226 SSPA0220 Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyl pyrophosphate synthase YP_002141065.1 263544 D 554290 CDS YP_002141066.1 197361430 264315..265172 1 NC_011147.1 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase 265172 cdsA 554290000227 cdsA Salmonella enterica subsp. enterica serovar Paratyphi A str. CDP-diglyceride synthase YP_002141066.1 264315 D 554290 CDS YP_002141067.1 197361431 265184..266536 1 NC_011147.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 266536 554290000228 SSPA0222 Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc metallopeptidase RseP YP_002141067.1 265184 D 554290 CDS YP_002141068.1 197361432 266568..268979 1 NC_011147.1 'part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins'; outer membrane protein assembly factor YaeT 268979 554290000229 SSPA0223 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein assembly factor YaeT YP_002141068.1 266568 D 554290 CDS YP_002141069.1 197361433 269102..269587 1 NC_011147.1 similar to Salmonella typhi Ty2 outer membrane protein OmpH precursor; periplasmic chaperone 269587 554290000230 SSPA0224 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic chaperone YP_002141069.1 269102 D 554290 CDS YP_002141070.1 197361434 269591..270616 1 NC_011147.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 270616 lpxD 554290000231 lpxD Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002141070.1 269591 D 554290 CDS YP_002141071.1 197361435 270722..271177 1 NC_011147.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 271177 fabZ 554290000232 fabZ Salmonella enterica subsp. enterica serovar Paratyphi A str. (3R)-hydroxymyristoyl-ACP dehydratase YP_002141071.1 270722 D 554290 CDS YP_002141072.1 197361436 271181..271969 1 NC_011147.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 271969 554290000233 SSPA0227 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylglucosamine acyltransferase YP_002141072.1 271181 D 554290 CDS YP_002141073.1 197361437 271969..273117 1 NC_011147.1 'catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM'; lipid-A-disaccharide synthase 273117 lpxB 554290000234 lpxB Salmonella enterica subsp. enterica serovar Paratyphi A str. lipid-A-disaccharide synthase YP_002141073.1 271969 D 554290 CDS YP_002141074.1 197361438 273114..273710 1 NC_011147.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 273710 rnhB 554290000235 rnhB Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease HII YP_002141074.1 273114 D 554290 CDS YP_002141075.1 197361439 273734..277216 1 NC_011147.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 277216 dnaE 554290000236 dnaE Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit alpha YP_002141075.1 273734 D 554290 CDS YP_002141076.1 197361440 277229..278188 1 NC_011147.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 278188 554290000237 SSPA0231 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002141076.1 277229 D 554290 CDS YP_002141077.1 197361441 278367..280130 1 NC_011147.1 similar to Salmonella typhi CT18 secreted chitinase; secreted chitinase 280130 554290000238 SSPA0232 Salmonella enterica subsp. enterica serovar Paratyphi A str. secreted chitinase YP_002141077.1 278367 D 554290 CDS YP_002141078.1 197361442 280206..282347 1 NC_011147.1 similar to Salmonella typhi CT18 lysine decarboxylase; lysine decarboxylase 282347 554290000239 SSPA0233 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysine decarboxylase YP_002141078.1 280206 D 554290 CDS YP_002141079.1 197361443 282403..282792 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 282792 554290000240 SSPA0234 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141079.1 282403 D 554290 CDS YP_002141080.2 449784914 282855..284147 1 NC_011147.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 284147 tilS 554290000241 tilS Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA(Ile)-lysidine synthetase YP_002141080.2 282855 D 554290 CDS YP_002141081.1 197361445 complement(284231..284485) 1 NC_011147.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 284485 554290000242 SSPA0236 Salmonella enterica subsp. enterica serovar Paratyphi A str. Rho-binding antiterminator YP_002141081.1 284231 R 554290 CDS YP_002141082.1 197361446 complement(284478..284696) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 284696 554290000243 SSPA0237 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141082.1 284478 R 554290 CDS YP_002141083.1 197361447 284876..285421 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 285421 554290000244 SSPA0238 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141083.1 284876 D 554290 CDS YP_002141084.1 197361448 285418..285840 1 NC_011147.1 similar to Salmonella typhi CT18 release factor; peptidyl-tRNA hydrolase domain-containing protein 285840 554290000245 SSPA0239 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-tRNA hydrolase domain-containing protein YP_002141084.1 285418 D 554290 CDS YP_002141085.1 197361449 285872..286573 1 NC_011147.1 similar to Salmonella typhi Ty2 copper homeostasis protein CutF precursor; copper homeostasis/adhesion lipoprotein 286573 554290000246 SSPA0240 Salmonella enterica subsp. enterica serovar Paratyphi A str. copper homeostasis/adhesion lipoprotein YP_002141085.1 285872 D 554290 CDS YP_002141086.1 197361450 complement(286647..288365) 1 NC_011147.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 288365 554290000247 SSPA0241 Salmonella enterica subsp. enterica serovar Paratyphi A str. prolyl-tRNA synthetase YP_002141086.1 286647 R 554290 CDS YP_002141087.1 197361451 complement(288476..289183) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 289183 554290000248 SSPA0242 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141087.1 288476 R 554290 CDS YP_002141088.1 197361452 complement(289180..289584) 1 NC_011147.1 similar to Salmonella typhi CT18 RcsF protein; outer membrane lipoprotein 289584 rcsF 554290000249 rcsF Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein YP_002141088.1 289180 R 554290 CDS YP_002141089.1 197361453 complement(289703..290518) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein precursor; DL-methionine transporter substrate-binding subunit 290518 metQ 554290000250 metQ Salmonella enterica subsp. enterica serovar Paratyphi A str. DL-methionine transporter substrate-binding subunit YP_002141089.1 289703 R 554290 CDS YP_002141090.1 197361454 complement(290557..291195) 1 NC_011147.1 part of the MetNIQ methionine uptake system; DL-methionine transporter permease 291195 554290000251 SSPA0245 Salmonella enterica subsp. enterica serovar Paratyphi A str. DL-methionine transporter permease YP_002141090.1 290557 R 554290 CDS YP_002141091.1 197361455 complement(291203..292234) 1 NC_011147.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 292234 metN 554290000252 metN Salmonella enterica subsp. enterica serovar Paratyphi A str. DL-methionine transporter ATP-binding subunit YP_002141091.1 291203 R 554290 CDS YP_002141092.1 197361456 292424..292990 1 NC_011147.1 'Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate'; D,D-heptose 1,7-bisphosphate phosphatase 292990 554290000253 SSPA0247 Salmonella enterica subsp. enterica serovar Paratyphi A str. D,D-heptose 1,7-bisphosphate phosphatase YP_002141092.1 292424 D 554290 CDS YP_002141093.1 197361457 298958..299413 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 299413 554290000259 SSPA0248 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141093.1 298958 D 554290 CDS YP_002141094.1 197361458 299517..300818 1 NC_011147.1 similar to Salmonella typhi CT18 alpha-ketoglutarate permease; alpha-ketoglutarate transporter 300818 554290000260 SSPA0249 Salmonella enterica subsp. enterica serovar Paratyphi A str. alpha-ketoglutarate transporter YP_002141094.1 299517 D 554290 CDS YP_002141095.1 197361459 complement(300815..301138) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 301138 554290000261 SSPA0250 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141095.1 300815 R 554290 CDS YP_002141096.1 197361460 complement(301183..302538) 1 NC_011147.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 302538 pssA 554290000262 pssA Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatidylserine synthase YP_002141096.1 301183 R 554290 CDS YP_002141097.1 197361461 complement(302653..305313) 1 NC_011147.1 similar to Salmonella typhi CT18 acyl-CoA synthetase; acyl-CoA synthetase 305313 554290000263 SSPA0252 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl-CoA synthetase YP_002141097.1 302653 R 554290 CDS YP_002141098.1 197361462 complement(305367..306047) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 306047 554290000264 SSPA0253 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141098.1 305367 R 554290 CDS YP_002141099.1 197361463 complement(306120..306539) 1 NC_011147.1 similar to Salmonella typhi Ty2 thioredoxin 2; thioredoxin 2 306539 554290000265 SSPA0254 Salmonella enterica subsp. enterica serovar Paratyphi A str. thioredoxin 2 YP_002141099.1 306120 R 554290 CDS YP_002141100.1 197361464 306743..307780 1 NC_011147.1 similar to Salmonella typhi CT18 RNA methyltransferase; methyltransferase 307780 554290000267 SSPA0255 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyltransferase YP_002141100.1 306743 D 554290 CDS YP_002141101.1 197361465 complement(307896..308585) 1 NC_011147.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 308585 554290000268 SSPA0256 Salmonella enterica subsp. enterica serovar Paratyphi A str. uracil-DNA glycosylase YP_002141101.1 307896 R 554290 CDS YP_002141102.1 197361466 308904..309287 1 NC_011147.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 309287 554290000269 SSPA0257 Salmonella enterica subsp. enterica serovar Paratyphi A str. autonomous glycyl radical cofactor GrcA YP_002141102.1 308904 D 554290 CDS YP_002141103.1 197361467 complement(309349..309936) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; neutral amino-acid efflux protein 309936 554290000270 SSPA0258 Salmonella enterica subsp. enterica serovar Paratyphi A str. neutral amino-acid efflux protein YP_002141103.1 309349 R 554290 CDS YP_002141104.1 197361468 309994..310938 1 NC_011147.1 'similar to Salmonella typhimurium transcriptional regulator, LysR family'; transcriptional regulator 310938 554290000271 SSPA0259 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141104.1 309994 D 554290 CDS YP_002141105.1 197361469 complement(310956..312290) 1 NC_011147.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 312290 554290000272 SSPA0260 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase SrmB YP_002141105.1 310956 R 554290 CDS YP_002141106.1 197361470 312420..313157 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 313157 554290000273 SSPA0261 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141106.1 312420 D 554290 CDS YP_002141107.1 197361471 complement(313142..314761) 1 NC_011147.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 314761 554290000274 SSPA0262 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-aspartate oxidase YP_002141107.1 313142 R 554290 CDS YP_002141108.1 197361472 315189..315764 1 NC_011147.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 315764 554290000275 SSPA0263 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA polymerase sigma factor RpoE YP_002141108.1 315189 D 554290 CDS YP_002141109.1 197361473 315796..316446 1 NC_011147.1 similar to Salmonella typhi CT18 sigma-E factor negative regulatory protein; anti-RNA polymerase sigma factor SigE 316446 554290000276 SSPA0264 Salmonella enterica subsp. enterica serovar Paratyphi A str. anti-RNA polymerase sigma factor SigE YP_002141109.1 315796 D 554290 CDS YP_002141110.1 197361474 316446..317402 1 NC_011147.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 317402 rseB 554290000277 rseB Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic negative regulator of sigmaE YP_002141110.1 316446 D 554290 CDS YP_002141111.1 197361475 317399..317878 1 NC_011147.1 involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 317878 554290000278 SSPA0266 Salmonella enterica subsp. enterica serovar Paratyphi A str. SoxR reducing system protein RseC YP_002141111.1 317399 D 554290 CDS YP_002141112.1 197361476 318130..319929 1 NC_011147.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 319929 554290000279 SSPA0267 Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP-binding protein LepA YP_002141112.1 318130 D 554290 CDS YP_002141113.1 197361477 319946..320920 1 NC_011147.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 320920 554290000280 SSPA0268 Salmonella enterica subsp. enterica serovar Paratyphi A str. signal peptidase I YP_002141113.1 319946 D 554290 CDS YP_002141114.1 197361478 321194..321874 1 NC_011147.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 321874 rnc 554290000281 rnc Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease III YP_002141114.1 321194 D 554290 CDS YP_002141115.1 197361479 321871..322776 1 NC_011147.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 322776 era 554290000282 era Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP-binding protein Era YP_002141115.1 321871 D 554290 CDS YP_002141116.1 197361480 322788..323516 1 NC_011147.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 323516 recO 554290000283 recO Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA repair protein RecO YP_002141116.1 322788 D 554290 CDS YP_002141117.1 197361481 323528..324259 1 NC_011147.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 324259 554290000284 SSPA0272 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyridoxine 5'-phosphate synthase YP_002141117.1 323528 D 554290 CDS YP_002141118.1 197361482 324259..324639 1 NC_011147.1 'Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids'; 4'-phosphopantetheinyl transferase 324639 acpS 554290000285 acpS Salmonella enterica subsp. enterica serovar Paratyphi A str. 4'-phosphopantetheinyl transferase YP_002141118.1 324259 D 554290 CDS YP_002141119.1 197361483 complement(324751..325011) 1 NC_011147.1 similar to Salmonella typhi CT18 ferredoxin; ferredoxin 325011 554290000286 SSPA0274 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferredoxin YP_002141119.1 324751 R 554290 CDS YP_002141120.1 197361484 complement(325049..325975) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 325975 554290000287 SSPA0275 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141120.1 325049 R 554290 CDS YP_002141121.1 197361485 326089..327285 1 NC_011147.1 similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 327285 554290000288 SSPA0276 Salmonella enterica subsp. enterica serovar Paratyphi A str. transmembrane transport protein YP_002141121.1 326089 D 554290 CDS YP_002141122.1 197361486 327358..328224 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; 2-dehydropantoate 2-reductase 328224 554290000289 SSPA0277 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-dehydropantoate 2-reductase YP_002141122.1 327358 D 554290 CDS YP_002141123.1 197361487 complement(328263..329111) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; DNA-binding transcriptional regulator 329111 554290000290 SSPA0278 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002141123.1 328263 R 554290 CDS YP_002141124.1 197361488 329227..330120 1 NC_011147.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 330120 murQ 554290000291 murQ Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmuramic acid 6-phosphate etherase YP_002141124.1 329227 D 554290 CDS YP_002141125.1 197361489 330131..331492 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system IIBC component; PTS system transporter subunit IIBC 331492 554290000292 SSPA0280 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system transporter subunit IIBC YP_002141125.1 330131 D 554290 CDS YP_002141126.1 197361490 332156..332707 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; tRNA-specific adenosine deaminase 332707 554290000294 SSPA0281 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA-specific adenosine deaminase YP_002141126.1 332156 D 554290 CDS YP_002141127.1 197361491 complement(332758..334302) 1 NC_011147.1 'YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function'; transglycosylase 334302 554290000295 SSPA0282 Salmonella enterica subsp. enterica serovar Paratyphi A str. transglycosylase YP_002141127.1 332758 R 554290 CDS YP_002141128.1 197361492 complement(334303..334533) 1 NC_011147.1 similar to Salmonella typhimurium periplasmic protein; hypothetical protein 334533 554290000296 SSPA0283 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141128.1 334303 R 554290 CDS YP_002141129.1 197361493 334558..338445 1 NC_011147.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 338445 554290000297 SSPA0284 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylformylglycinamidine synthase YP_002141129.1 334558 D 554290 CDS YP_008144947.1 516595075 339083..340525 1 NC_011147.1 sensor histidine kinase 340525 554290000299 SSPA0285 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor histidine kinase YP_008144947.1 339083 D 554290 CDS YP_002141131.1 197361495 340527..341291 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 341291 554290000300 SSPA0286 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141131.1 340527 D 554290 CDS YP_002141132.1 197361496 341288..342625 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 342625 554290000301 SSPA0287 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141132.1 341288 D 554290 CDS YP_002141133.1 197361497 342702..343040 1 NC_011147.1 'indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA'; nitrogen regulatory protein P-II 1 343040 554290000302 SSPA0288 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrogen regulatory protein P-II 1 YP_002141133.1 342702 D 554290 CDS YP_002141134.1 197361498 complement(343089..344549) 1 NC_011147.1 similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 344549 554290000303 SSPA0289 Salmonella enterica subsp. enterica serovar Paratyphi A str. transmembrane transport protein YP_002141134.1 343089 R 554290 CDS YP_002141135.1 197361499 complement(344605..346749) 1 NC_011147.1 similar to Salmonella typhi CT18 lysine decarboxylase; lysine decarboxylase 346749 554290000304 SSPA0290 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysine decarboxylase YP_002141135.1 344605 R 554290 CDS YP_002141136.1 197361500 complement(346832..348163) 1 NC_011147.1 antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; lysine/cadaverine antiporter 348163 cadB 554290000305 cadB Salmonella enterica subsp. enterica serovar Paratyphi A str. lysine/cadaverine antiporter YP_002141136.1 346832 R 554290 CDS YP_002141137.1 197361501 complement(350249..351439) 1 NC_011147.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 351439 554290000307 SSPA0292 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitric oxide dioxygenase YP_002141137.1 350249 R 554290 CDS YP_002141138.1 197361502 351764..353017 1 NC_011147.1 'catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate'; serine hydroxymethyltransferase 353017 glyA 554290000308 glyA Salmonella enterica subsp. enterica serovar Paratyphi A str. serine hydroxymethyltransferase YP_002141138.1 351764 D 554290 CDS YP_002141139.1 197361503 353213..354352 1 NC_011147.1 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter 354352 554290000309 SSPA0294 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-phenylpropionic acid transporter YP_002141139.1 353213 D 554290 CDS YP_002141140.1 197361504 complement(354347..355624) 1 NC_011147.1 similar to Salmonella typhi CT18 stationary phase inducible protein CsiE; stationary phase inducible protein CsiE 355624 554290000310 SSPA0295 Salmonella enterica subsp. enterica serovar Paratyphi A str. stationary phase inducible protein CsiE YP_002141140.1 354347 R 554290 CDS YP_002141141.1 197361505 355750..356388 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 356388 554290000311 SSPA0296 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141141.1 355750 D 554290 CDS YP_002141142.1 197361506 356379..357365 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 357365 554290000312 SSPA0297 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002141142.1 356379 D 554290 CDS YP_002141143.1 197361507 complement(357366..358379) 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic sulfite reductase subunit C; anaerobic sulfite reductase subunit C 358379 554290000313 SSPA0298 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic sulfite reductase subunit C YP_002141143.1 357366 R 554290 CDS YP_002141144.1 197361508 complement(358390..359208) 1 NC_011147.1 with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B 359208 554290000314 SSPA0299 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic sulfite reductase subunit B YP_002141144.1 358390 R 554290 CDS YP_002141145.1 197361509 complement(359212..360255) 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic sulfite reductase subunit A; anaerobic sulfite reductase subunit A 360255 554290000315 SSPA0300 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic sulfite reductase subunit A YP_002141145.1 359212 R 554290 CDS YP_002141146.1 197361510 complement(360437..361315) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 361315 554290000316 SSPA0301 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141146.1 360437 R 554290 CDS YP_002141147.1 197361511 complement(361460..362263) 1 NC_011147.1 similar to Salmonella typhi CT18 extragenic suppressor protein SuhB; inositol monophosphatase 362263 554290000317 SSPA0302 Salmonella enterica subsp. enterica serovar Paratyphi A str. inositol monophosphatase YP_002141147.1 361460 R 554290 CDS YP_002141148.1 197361512 362382..363113 1 NC_011147.1 similar to Salmonella typhi CT18 RNA methyltransferase; RNA methyltransferase 363113 554290000318 SSPA0303 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA methyltransferase YP_002141148.1 362382 D 554290 CDS YP_002141149.1 197361513 363291..363785 1 NC_011147.1 regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 363785 554290000319 SSPA0304 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator IscR YP_002141149.1 363291 D 554290 CDS YP_002141150.1 197361514 363966..365180 1 NC_011147.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 365180 554290000320 SSPA0305 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine desulfurase YP_002141150.1 363966 D 554290 CDS YP_002141151.1 197361515 365208..365594 1 NC_011147.1 similar to Salmonella typhi CT18 NifU-like protein; scaffold protein 365594 554290000321 SSPA0306 Salmonella enterica subsp. enterica serovar Paratyphi A str. scaffold protein YP_002141151.1 365208 D 554290 CDS YP_002141152.1 197361516 365623..365946 1 NC_011147.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 365946 iscA 554290000322 iscA Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-sulfur cluster assembly protein YP_002141152.1 365623 D 554290 CDS YP_002141153.1 197361517 366143..366658 1 NC_011147.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 366658 hscB 554290000323 hscB Salmonella enterica subsp. enterica serovar Paratyphi A str. co-chaperone HscB YP_002141153.1 366143 D 554290 CDS YP_002141154.1 197361518 366671..368521 1 NC_011147.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 368521 hscA 554290000324 hscA Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone protein HscA YP_002141154.1 366671 D 554290 CDS YP_002141155.1 197361519 368523..368858 1 NC_011147.1 similar to Salmonella typhi CT18 ferredoxin; ferredoxin 368858 554290000325 SSPA0310 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferredoxin YP_002141155.1 368523 D 554290 CDS YP_002141156.1 197361520 368870..369070 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 369070 554290000326 SSPA0311 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141156.1 368870 D 554290 CDS YP_002141157.1 197361521 369124..370407 1 NC_011147.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 370407 554290000327 SSPA0312 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminopeptidase B YP_002141157.1 369124 D 554290 CDS YP_002141158.1 197361522 370508..371293 1 NC_011147.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 371293 554290000328 SSPA0313 Salmonella enterica subsp. enterica serovar Paratyphi A str. enhanced serine sensitivity protein SseB YP_002141158.1 370508 D 554290 CDS YP_002141159.1 197361523 complement(371862..372530) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 372530 554290000329 SSPA0314 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141159.1 371862 R 554290 CDS YP_002141160.1 197361524 complement(372776..373618) 1 NC_011147.1 catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; 3-mercaptopyruvate sulfurtransferase 373618 sseA 554290000330 sseA Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-mercaptopyruvate sulfurtransferase YP_002141160.1 372776 R 554290 CDS YP_002141161.1 197361525 373827..378761 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 378761 554290000331 SSPA0316 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141161.1 373827 D 554290 CDS YP_002141162.1 197361526 378762..381077 1 NC_011147.1 penicillin-insensitive transglycosylase/transpeptidase; penicillin-binding protein 1C 381077 554290000332 SSPA0317 Salmonella enterica subsp. enterica serovar Paratyphi A str. penicillin-binding protein 1C YP_002141162.1 378762 D 554290 CDS YP_002141163.1 197361527 383609..384238 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic reductase component; anaerobic reductase subunit 384238 554290000334 SSPA0318 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic reductase subunit YP_002141163.1 383609 D 554290 CDS YP_002141164.1 197361528 384231..385040 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic reductase component; anaerobic reductase subunit 385040 554290000335 SSPA0319 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic reductase subunit YP_002141164.1 384231 D 554290 CDS YP_002141165.1 197361529 385040..385903 1 NC_011147.1 similar to Salmonella typhi CT18 polyferredoxin; polyferredoxin 385903 554290000336 SSPA0320 Salmonella enterica subsp. enterica serovar Paratyphi A str. polyferredoxin YP_002141165.1 385040 D 554290 CDS YP_002141166.1 197361530 386024..386455 1 NC_011147.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 386455 ndk 554290000337 ndk Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside diphosphate kinase YP_002141166.1 386024 D 554290 CDS YP_002141167.1 197361531 386662..387828 1 NC_011147.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 387828 554290000338 SSPA0322 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosomal RNA large subunit methyltransferase N YP_002141167.1 386662 D 554290 CDS YP_002141168.1 197361532 388120..389124 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; cytoskeletal protein RodZ 389124 554290000339 SSPA0323 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytoskeletal protein RodZ YP_002141168.1 388120 D 554290 CDS YP_002141169.1 197361533 389151..390269 1 NC_011147.1 'catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis'; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 390269 ispG 554290000340 ispG Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002141169.1 389151 D 554290 CDS YP_002141170.1 197361534 390380..391654 1 NC_011147.1 'catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG'; histidyl-tRNA synthetase 391654 hisS 554290000341 hisS Salmonella enterica subsp. enterica serovar Paratyphi A str. histidyl-tRNA synthetase YP_002141170.1 390380 D 554290 CDS YP_002141171.1 197361535 391668..392288 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 392288 554290000342 SSPA0326 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141171.1 391668 D 554290 CDS YP_002141172.1 197361536 392299..393477 1 NC_011147.1 'with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis'; outer membrane protein assembly complex subunit YfgL 393477 554290000343 SSPA0327 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein assembly complex subunit YfgL YP_002141172.1 392299 D 554290 CDS YP_002141173.1 197361537 393594..395066 1 NC_011147.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 395066 engA 554290000344 engA Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP-binding protein EngA YP_002141173.1 393594 D 554290 CDS YP_002141174.1 197361538 395155..395376 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 395376 554290000345 SSPA0329 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141174.1 395155 D 554290 CDS YP_002141175.1 197361539 397935..398900 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 398900 554290000347 SSPA0330 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141175.1 397935 D 554290 CDS YP_002141176.1 197361540 399020..405412 1 NC_011147.1 similar to Salmonella typhi Ty2 exported protein; hypothetical protein 405412 554290000348 SSPA0331 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141176.1 399020 D 554290 CDS YP_002141177.1 197361541 complement(418816..420165) 1 NC_011147.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 420165 xseA 554290000351 xseA Salmonella enterica subsp. enterica serovar Paratyphi A str. exodeoxyribonuclease VII large subunit YP_002141177.1 418816 R 554290 CDS YP_002141178.1 197361542 420326..421792 1 NC_011147.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 421792 554290000352 SSPA0333 Salmonella enterica subsp. enterica serovar Paratyphi A str. inosine 5'-monophosphate dehydrogenase YP_002141178.1 420326 D 554290 CDS YP_002141179.1 197361543 421862..423439 1 NC_011147.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 423439 guaA 554290000353 guaA Salmonella enterica subsp. enterica serovar Paratyphi A str. GMP synthase YP_002141179.1 421862 D 554290 CDS YP_002141180.1 197361544 423527..423685 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 423685 554290000354 SSPA0335 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141180.1 423527 D 554290 CDS YP_002141181.1 197361545 complement(424678..425217) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 425217 554290000356 SSPA0336 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141181.1 424678 R 554290 CDS YP_002141182.1 197361546 complement(425233..425748) 1 NC_011147.1 similar to Salmonella typhimurium outer membrane lipoprotein; outer membrane lipoprotein 425748 554290000357 SSPA0337 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein YP_002141182.1 425233 R 554290 CDS YP_002141183.1 197361547 426052..426291 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 426291 554290000358 SSPA0338 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141183.1 426052 D 554290 CDS YP_002141184.1 197361548 426362..426499 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 426499 554290000359 SSPA0339 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141184.1 426362 D 554290 CDS YP_002141185.1 197361549 426596..428809 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 428809 554290000360 SSPA0340 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141185.1 426596 D 554290 CDS YP_002141186.1 197361550 complement(428845..430386) 1 NC_011147.1 similar to Salmonella typhi CT18 exopolyphosphatase; exopolyphosphatase 430386 554290000361 SSPA0341 Salmonella enterica subsp. enterica serovar Paratyphi A str. exopolyphosphatase YP_002141186.1 428845 R 554290 CDS YP_002141187.1 197361551 complement(430391..432457) 1 NC_011147.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 432457 554290000362 SSPA0342 Salmonella enterica subsp. enterica serovar Paratyphi A str. polyphosphate kinase YP_002141187.1 430391 R 554290 CDS YP_002141188.1 197361552 complement(432646..433284) 1 NC_011147.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 433284 purN 554290000363 purN Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylglycinamide formyltransferase YP_002141188.1 432646 R 554290 CDS YP_002141189.1 197361553 complement(433284..434321) 1 NC_011147.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 434321 554290000364 SSPA0344 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylaminoimidazole synthetase YP_002141189.1 433284 R 554290 CDS YP_002141190.1 197361554 434734..435360 1 NC_011147.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 435360 upp 554290000365 upp Salmonella enterica subsp. enterica serovar Paratyphi A str. uracil phosphoribosyltransferase YP_002141190.1 434734 D 554290 CDS YP_002141191.1 197361555 435448..436737 1 NC_011147.1 similar to Salmonella typhi CT18 uracil permease (uracil transporter); uracil transporter 436737 554290000366 SSPA0346 Salmonella enterica subsp. enterica serovar Paratyphi A str. uracil transporter YP_002141191.1 435448 D 554290 CDS YP_002141192.1 197361556 436808..437533 1 NC_011147.1 'controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP'; DNA replication initiation factor 437533 554290000367 SSPA0347 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA replication initiation factor YP_002141192.1 436808 D 554290 CDS YP_002141193.1 197361557 complement(437560..437919) 1 NC_011147.1 similar to Salmonella typhi Ty2 arsenate reductase; arsenate reductase 437919 554290000368 SSPA0348 Salmonella enterica subsp. enterica serovar Paratyphi A str. arsenate reductase YP_002141193.1 437560 R 554290 CDS YP_002141194.1 197361558 complement(437959..439422) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 439422 554290000369 SSPA0349 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141194.1 437959 R 554290 CDS YP_002141195.1 197361559 441038..442162 1 NC_011147.1 similar to |16124105|ref|NP_407418.1| regulatory protein [Yersinia pestis]; hypothetical protein 442162 554290000371 SSPA0350 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141195.1 441038 D 554290 CDS YP_002141196.1 197361560 442230..443498 1 NC_011147.1 similar to Salmonella typhi CT18 permease; permease 443498 554290000372 SSPA0351 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease YP_002141196.1 442230 D 554290 CDS YP_002141197.1 197361561 443504..444643 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 444643 554290000373 SSPA0352 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141197.1 443504 D 554290 CDS YP_002141198.1 197361562 complement(444690..445160) 1 NC_011147.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 445160 bcp 554290000374 bcp Salmonella enterica subsp. enterica serovar Paratyphi A str. thioredoxin-dependent thiol peroxidase YP_002141198.1 444690 R 554290 CDS YP_002141199.1 197361563 complement(445160..445732) 1 NC_011147.1 negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 445732 gcvR 554290000375 gcvR Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine cleavage system transcriptional repressor YP_002141199.1 445160 R 554290 CDS YP_002141200.1 197361564 445878..446756 1 NC_011147.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 446756 554290000376 SSPA0355 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydrodipicolinate synthase YP_002141200.1 445878 D 554290 CDS YP_002141201.1 197361565 446773..447807 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 447807 554290000377 SSPA0356 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141201.1 446773 D 554290 CDS YP_002141202.1 197361566 447982..448695 1 NC_011147.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 448695 554290000378 SSPA0357 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_002141202.1 447982 D 554290 CDS YP_002141203.1 197361567 448826..449689 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 449689 554290000379 SSPA0358 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141203.1 448826 D 554290 CDS YP_002141204.1 197361568 449705..451723 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 451723 554290000380 SSPA0359 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141204.1 449705 D 554290 CDS YP_002141205.1 197361569 complement(451750..451950) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 451950 554290000381 SSPA0360 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141205.1 451750 R 554290 CDS YP_002141206.1 197361570 complement(451978..453105) 1 NC_011147.1 'dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.'; succinyl-diaminopimelate desuccinylase 453105 554290000382 SSPA0361 Salmonella enterica subsp. enterica serovar Paratyphi A str. succinyl-diaminopimelate desuccinylase YP_002141206.1 451978 R 554290 CDS YP_002141207.1 197361571 complement(453109..453465) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 453465 554290000383 SSPA0362 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141207.1 453109 R 554290 CDS YP_002141208.1 197361572 complement(454039..457152) 1 NC_011147.1 similar to Salmonella typhi CT18 efflux pump; aminoglycoside/multidrug efflux system 457152 554290000384 SSPA0363 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminoglycoside/multidrug efflux system YP_002141208.1 454039 R 554290 CDS YP_002141209.1 197361573 459225..461186 1 NC_011147.1 'unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic)'; oxidoreductase Fe-S binding subunit 461186 554290000386 SSPA0364 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase Fe-S binding subunit YP_002141209.1 459225 D 554290 CDS YP_002141210.1 197361574 complement(461634..462932) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 462932 554290000387 SSPA0365 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141210.1 461634 R 554290 CDS YP_002141211.1 197361575 463136..463711 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 463711 554290000388 SSPA0366 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141211.1 463136 D 554290 CDS YP_002141212.1 197361576 463836..464879 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 464879 554290000389 SSPA0367 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141212.1 463836 D 554290 CDS YP_002141213.1 197361577 465007..465237 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 465237 554290000390 SSPA0368 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141213.1 465007 D 554290 CDS YP_002141214.1 197361578 complement(465300..467300) 1 NC_011147.1 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase'; transketolase 467300 554290000391 SSPA0369 Salmonella enterica subsp. enterica serovar Paratyphi A str. transketolase YP_002141214.1 465300 R 554290 CDS YP_002141215.1 197361579 complement(467320..468270) 1 NC_011147.1 similar to Salmonella typhi CT18 transaldolase A; transaldolase A 468270 554290000392 SSPA0370 Salmonella enterica subsp. enterica serovar Paratyphi A str. transaldolase A YP_002141215.1 467320 R 554290 CDS YP_002141216.1 197361580 468542..470821 1 NC_011147.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 470821 554290000393 SSPA0371 Salmonella enterica subsp. enterica serovar Paratyphi A str. malic enzyme YP_002141216.1 468542 D 554290 CDS YP_002141217.1 197361581 471239..471574 1 NC_011147.1 similar to Salmonella typhi CT18 ethanolamine utilization protein EutS; ethanolamine utilization protein EutS 471574 554290000394 SSPA0372 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein EutS YP_002141217.1 471239 D 554290 CDS YP_002141218.1 197361582 471587..472066 1 NC_011147.1 similar to Salmonella typhimurium ethanolamine utilization protein; ethanolamine utilization protein 472066 554290000395 SSPA0373 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein YP_002141218.1 471587 D 554290 CDS YP_002141219.1 197361583 472044..472733 1 NC_011147.1 similar to Salmonella typhimurium ethanolamine utilization protein; ethanolamine utilization protein 472733 554290000396 SSPA0374 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein YP_002141219.1 472044 D 554290 CDS YP_002141220.1 197361584 472730..473533 1 NC_011147.1 similar to Salmonella typhi CT18 cobalamin adenosyltransferase; cobalamin adenosyltransferase 473533 554290000397 SSPA0375 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalamin adenosyltransferase YP_002141220.1 472730 D 554290 CDS YP_002141221.1 197361585 473530..474546 1 NC_011147.1 in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 474546 eutD 554290000398 eutD Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransacetylase YP_002141221.1 473530 D 554290 CDS YP_002141222.1 197361586 474587..474877 1 NC_011147.1 similar to Salmonella typhi Ty2 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN 474877 554290000399 SSPA0377 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein EutN YP_002141222.1 474587 D 554290 CDS YP_002141223.1 197361587 474930..475277 1 NC_011147.1 similar to Salmonella typhi CT18 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN 475277 554290000400 SSPA0378 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein EutN YP_002141223.1 474930 D 554290 CDS YP_002141224.1 197361588 475289..476692 1 NC_011147.1 similar to Salmonella typhi CT18 aldehyde dehydrogenase; aldehyde dehydrogenase 476692 554290000401 SSPA0379 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldehyde dehydrogenase YP_002141224.1 475289 D 554290 CDS YP_002141225.1 197361589 476703..477542 1 NC_011147.1 similar to Salmonella typhi CT18 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ 477542 554290000402 SSPA0380 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein EutJ YP_002141225.1 476703 D 554290 CDS YP_002141226.1 197361590 477532..478719 1 NC_011147.1 similar to Salmonella typhi CT18 alchohol dehydrogenase; alchohol dehydrogenase 478719 554290000403 SSPA0381 Salmonella enterica subsp. enterica serovar Paratyphi A str. alchohol dehydrogenase YP_002141226.1 477532 D 554290 CDS YP_002141227.1 197361591 478839..480065 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 480065 554290000404 SSPA0382 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141227.1 478839 D 554290 CDS YP_002141228.1 197361592 480062..481285 1 NC_011147.1 ethanolamine utilization protein EutA; reactivating factor for ethanolamine ammonia lyase 481285 eutA 554290000405 eutA Salmonella enterica subsp. enterica serovar Paratyphi A str. reactivating factor for ethanolamine ammonia lyase YP_002141228.1 480062 D 554290 CDS YP_002141229.1 197361593 481297..482658 1 NC_011147.1 similar to Salmonella typhi CT18 ethanolamine ammonia-lyase heavy chain; ethanolamine ammonia-lyase heavy subunit 482658 554290000406 SSPA0384 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine ammonia-lyase heavy subunit YP_002141229.1 481297 D 554290 CDS YP_002141230.1 197361594 482677..483573 1 NC_011147.1 catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 483573 554290000407 SSPA0385 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine ammonia-lyase small subunit YP_002141230.1 482677 D 554290 CDS YP_002141231.1 197361595 483583..484242 1 NC_011147.1 similar to Salmonella typhi CT18 ethanolamine utilization protein EutL; ethanolamine utilization protein EutL 484242 554290000408 SSPA0386 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein EutL YP_002141231.1 483583 D 554290 CDS YP_002141232.1 197361596 484255..484749 1 NC_011147.1 similar to Salmonella typhi CT18 ethanolamine utilization protein EutK; ethanolamine utilization protein EutK 484749 554290000409 SSPA0387 Salmonella enterica subsp. enterica serovar Paratyphi A str. ethanolamine utilization protein EutK YP_002141232.1 484255 D 554290 CDS YP_002141233.1 197361597 484797..485849 1 NC_011147.1 activates the transcription of the ethanolamine utilization operon; transcriptional regulator EutR 485849 554290000410 SSPA0388 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator EutR YP_002141233.1 484797 D 554290 CDS YP_002141234.1 197361598 complement(486048..486974) 1 NC_011147.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 486974 554290000411 SSPA0389 Salmonella enterica subsp. enterica serovar Paratyphi A str. coproporphyrinogen III oxidase YP_002141234.1 486048 R 554290 CDS YP_002141235.1 197361599 complement(486977..487846) 1 NC_011147.1 similar to Salmonella typhi CT18 probable N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I 487846 554290000412 SSPA0390 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmuramoyl-l-alanine amidase I YP_002141235.1 486977 R 554290 CDS YP_002141236.1 197361600 488059..488484 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 488484 554290000413 SSPA0391 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002141236.1 488059 D 554290 CDS YP_002141237.1 197361601 488471..488920 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 488920 554290000414 SSPA0392 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141237.1 488471 D 554290 CDS YP_002141238.1 197361602 488982..489557 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 489557 554290000415 SSPA0393 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141238.1 488982 D 554290 CDS YP_002141239.1 197361603 489652..490551 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 490551 554290000416 SSPA0394 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141239.1 489652 D 554290 CDS YP_002141240.1 197361604 490789..491580 1 NC_011147.1 similar to Salmonella typhi Ty2 oxidoreductase; short chain dehydrogenase 491580 554290000417 SSPA0395 Salmonella enterica subsp. enterica serovar Paratyphi A str. short chain dehydrogenase YP_002141240.1 490789 D 554290 CDS YP_002141241.1 197361605 491738..492754 1 NC_011147.1 similar to Salmonella typhi CT18 thiosulphate-binding protein precursor; thiosulfate transporter subunit 492754 554290000418 SSPA0396 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiosulfate transporter subunit YP_002141241.1 491738 D 554290 CDS YP_002141242.1 197361606 492754..493587 1 NC_011147.1 similar to Salmonella typhi CT18 sulphate transport system permease protein CysT; sulfate/thiosulfate transporter subunit 493587 554290000419 SSPA0397 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate/thiosulfate transporter subunit YP_002141242.1 492754 D 554290 CDS YP_002141243.1 197361607 493587..494462 1 NC_011147.1 Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease subunit 494462 cysW 554290000420 cysW Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate/thiosulfate transporter permease subunit YP_002141243.1 493587 D 554290 CDS YP_002141244.1 197361608 494452..495546 1 NC_011147.1 similar to Salmonella typhi CT18 sulphate transport ATP-binding protein CysA; sulfate/thiosulfate transporter subunit 495546 554290000421 SSPA0399 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate/thiosulfate transporter subunit YP_002141244.1 494452 D 554290 CDS YP_002141245.1 197361609 495667..496578 1 NC_011147.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 496578 cysM 554290000422 cysM Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine synthase B YP_002141245.1 495667 D 554290 CDS YP_002141246.1 197361610 complement(496611..496988) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 496988 554290000423 SSPA0401 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141246.1 496611 R 554290 CDS YP_002141247.1 197361611 complement(497047..497688) 1 NC_011147.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 497688 554290000424 SSPA0402 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamine amidotransferase YP_002141247.1 497047 R 554290 CDS YP_002141248.1 197361612 complement(497703..498995) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 498995 554290000425 SSPA0403 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141248.1 497703 R 554290 CDS YP_002141249.1 197361613 499078..499944 1 NC_011147.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase 499944 pdxK 554290000426 pdxK Salmonella enterica subsp. enterica serovar Paratyphi A str. pyridoxal kinase YP_002141249.1 499078 D 554290 CDS YP_002141250.1 197361614 complement(500343..500852) 1 NC_011147.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 500852 554290000427 SSPA0405 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system glucose-specific transporter YP_002141250.1 500343 R 554290 CDS YP_002141251.1 197361615 complement(500893..502620) 1 NC_011147.1 'Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system'; phosphoenolpyruvate-protein phosphotransferase 502620 554290000428 SSPA0406 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoenolpyruvate-protein phosphotransferase YP_002141251.1 500893 R 554290 CDS YP_002141252.1 197361616 complement(502669..502926) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphocarrier protein HPr; PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr 502926 554290000429 SSPA0407 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr YP_002141252.1 502669 R 554290 CDS YP_002141253.1 197361617 complement(503310..504281) 1 NC_011147.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 504281 554290000430 SSPA0408 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine synthase A YP_002141253.1 503310 R 554290 CDS YP_002141254.1 197361618 complement(504593..505354) 1 NC_011147.1 role in sulfur assimilation; sulfate transport protein CysZ 505354 554290000431 SSPA0409 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate transport protein CysZ YP_002141254.1 504593 R 554290 CDS YP_002141255.1 197361619 505586..506572 1 NC_011147.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 506572 554290000432 SSPA0410 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein ZipA YP_002141255.1 505586 D 554290 CDS YP_002141256.1 197361620 506644..508659 1 NC_011147.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 508659 ligA 554290000433 ligA Salmonella enterica subsp. enterica serovar Paratyphi A str. NAD-dependent DNA ligase LigA YP_002141256.1 506644 D 554290 CDS YP_002141257.1 197361621 508652..508879 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 508879 554290000434 SSPA0412 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141257.1 508652 D 554290 CDS YP_002141258.1 197361622 complement(508876..509874) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 509874 554290000435 SSPA0413 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141258.1 508876 R 554290 CDS YP_002141259.1 197361623 509964..510890 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 510890 554290000436 SSPA0414 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141259.1 509964 D 554290 CDS YP_002141260.1 197361624 511734..513149 1 NC_011147.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 513149 gltX 554290000441 gltX Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamyl-tRNA synthetase YP_002141260.1 511734 D 554290 CDS YP_002141261.1 197361625 complement(513203..513595) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 513595 554290000442 SSPA0416 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141261.1 513203 R 554290 CDS YP_002141262.1 197361626 complement(513597..513959) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 513959 554290000443 SSPA0417 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141262.1 513597 R 554290 CDS YP_002141263.1 197361627 514447..516636 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 516636 554290000445 SSPA0418 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141263.1 514447 D 554290 CDS YP_002141264.1 197361628 518056..519297 1 NC_011147.1 similar to Salmonella typhi CT18 manganese transport protein MntH; manganese transport protein MntH 519297 554290000447 SSPA0419 Salmonella enterica subsp. enterica serovar Paratyphi A str. manganese transport protein MntH YP_002141264.1 518056 D 554290 CDS YP_002141265.1 197361629 complement(519358..519684) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 519684 554290000448 SSPA0420 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141265.1 519358 R 554290 CDS YP_002141266.1 197361630 complement(519798..520796) 1 NC_011147.1 similar to Salmonella typhi CT18 ion-channel protein; ion-channel protein 520796 554290000449 SSPA0421 Salmonella enterica subsp. enterica serovar Paratyphi A str. ion-channel protein YP_002141266.1 519798 R 554290 CDS YP_002141267.1 197361631 520976..522628 1 NC_011147.1 similar to Salmonella typhi CT18 decarboxylase; decarboxylase 522628 554290000450 SSPA0422 Salmonella enterica subsp. enterica serovar Paratyphi A str. decarboxylase YP_002141267.1 520976 D 554290 CDS YP_002141268.1 197361632 complement(522648..523883) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 523883 554290000451 SSPA0423 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141268.1 522648 R 554290 CDS YP_002141269.1 197361633 524087..525052 1 NC_011147.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 525052 glk 554290000452 glk Salmonella enterica subsp. enterica serovar Paratyphi A str. glucokinase YP_002141269.1 524087 D 554290 CDS YP_002141270.1 197361634 525775..527013 1 NC_011147.1 similar to Salmonella typhi CT18 aminotransferase; aminotransferase 527013 554290000453 SSPA0425 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminotransferase YP_002141270.1 525775 D 554290 CDS YP_002141271.1 197361635 complement(527537..528457) 1 NC_011147.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 528457 554290000454 SSPA0426 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipid A biosynthesis palmitoleoyl acyltransferase YP_002141271.1 527537 R 554290 CDS YP_002141272.1 197361636 528978..529220 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 529220 554290000455 SSPA0427 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141272.1 528978 D 554290 CDS YP_002141273.1 197361637 complement(529458..530849) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphoglycerate transporter protein; phosphoglycerate transporter protein 530849 554290000456 SSPA0428 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycerate transporter protein YP_002141273.1 529458 R 554290 CDS YP_002141274.1 197361638 531285..532478 1 NC_011147.1 similar to Salmonella typhi CT18 phosphoglycerate transport regulatory protein PgtC precursor; phosphoglycerate transport regulatory protein PgtC 532478 554290000457 SSPA0429 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycerate transport regulatory protein PgtC YP_002141274.1 531285 D 554290 CDS YP_002141275.1 197361639 534472..535719 1 NC_011147.1 similar to Salmonella typhi CT18 phosphoglycerate transport system transcriptional regulatory protein PgtA; phosphoglycerate transport system transcriptional regulatory protein PgtA 535719 554290000459 SSPA0430 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycerate transport system transcriptional regulatory protein PgtA YP_002141275.1 534472 D 554290 CDS YP_002141276.1 197361640 535987..536925 1 NC_011147.1 outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA; outer membrane protease 536925 554290000460 SSPA0431 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protease YP_002141276.1 535987 D 554290 CDS YP_002141277.1 197361641 complement(538406..540328) 1 NC_011147.1 similar to Salmonella typhi CT18 lipopolysaccharide modification acyltransferase; lipopolysaccharide modification acyltransferase 540328 554290000462 SSPA0432 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide modification acyltransferase YP_002141277.1 538406 R 554290 CDS YP_002141278.1 197361642 complement(540345..540599) 1 NC_011147.1 similar to Salmonella typhi CT18 bactoprenol glucosyl transferase; bactoprenol glucosyl transferase 540599 554290000463 SSPA0433 Salmonella enterica subsp. enterica serovar Paratyphi A str. bactoprenol glucosyl transferase YP_002141278.1 540345 R 554290 CDS YP_002141279.1 197361643 complement(540568..540957) 1 NC_011147.1 similar to Salmonella typhi Ty2 bactoprenol-linked glucose transferase; bactoprenol-linked glucose transferase 540957 554290000464 SSPA0434 Salmonella enterica subsp. enterica serovar Paratyphi A str. bactoprenol-linked glucose transferase YP_002141279.1 540568 R 554290 CDS YP_002141280.1 197361644 complement(542200..543141) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 543141 554290000466 SSPA0435 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141280.1 542200 R 554290 CDS YP_002141281.1 197361645 543430..544185 1 NC_011147.1 similar to Salmonella typhi CT18 VacJ lipoprotein precursor; VacJ lipoprotein 544185 554290000467 SSPA0436 Salmonella enterica subsp. enterica serovar Paratyphi A str. VacJ lipoprotein YP_002141281.1 543430 D 554290 CDS YP_002141282.1 197361646 complement(544246..545559) 1 NC_011147.1 similar to Salmonella typhi CT18 long-chain fatty acid transport protein precursor; long-chain fatty acid outer membrane transporter 545559 554290000468 SSPA0437 Salmonella enterica subsp. enterica serovar Paratyphi A str. long-chain fatty acid outer membrane transporter YP_002141282.1 544246 R 554290 CDS YP_002141283.1 197361647 545924..546208 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 546208 554290000469 SSPA0438 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141283.1 545924 D 554290 CDS YP_002141284.1 197361648 546385..547695 1 NC_011147.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 547695 fadI 554290000470 fadI Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-ketoacyl-CoA thiolase YP_002141284.1 546385 D 554290 CDS YP_002141285.1 197361649 547695..549842 1 NC_011147.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 549842 fadJ 554290000471 fadJ Salmonella enterica subsp. enterica serovar Paratyphi A str. multifunctional fatty acid oxidation complex subunit alpha YP_002141285.1 547695 D 554290 CDS YP_002141286.1 197361650 550051..550536 1 NC_011147.1 similar to Salmonella typhi CT18 phosphohistidine phosphatase; phosphohistidine phosphatase 550536 554290000472 SSPA0441 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphohistidine phosphatase YP_002141286.1 550051 D 554290 CDS YP_002141287.1 197361651 complement(550636..551187) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 551187 554290000473 SSPA0442 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141287.1 550636 R 554290 CDS YP_002141289.1 197361653 552321..553406 1 NC_011147.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 553406 554290000475 SSPA0444 Salmonella enterica subsp. enterica serovar Paratyphi A str. chorismate synthase YP_002141289.1 552321 D 554290 CDS YP_002141290.1 197361654 553410..554234 1 NC_011147.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 554234 mepA 554290000476 mepA Salmonella enterica subsp. enterica serovar Paratyphi A str. penicillin-insensitive murein endopeptidase YP_002141290.1 553410 D 554290 CDS YP_002141291.1 197361655 554234..555043 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 555043 554290000477 SSPA0446 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141291.1 554234 D 554290 CDS YP_002141292.1 197361656 555043..555591 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 555591 554290000478 SSPA0447 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141292.1 555043 D 554290 CDS YP_002141293.1 197361657 555624..555899 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 555899 554290000479 SSPA0448 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141293.1 555624 D 554290 CDS YP_002141294.2 449784915 complement(555947..557947) 1 NC_011147.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 557947 mnmC 554290000480 mnmC Salmonella enterica subsp. enterica serovar Paratyphi A str. 5-methylaminomethyl-2-thiouridine methyltransferase YP_002141294.2 555947 R 554290 CDS YP_002141295.1 197361659 558107..559321 1 NC_011147.1 'FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP'; 3-oxoacyl-ACP synthase 559321 554290000481 SSPA0450 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-oxoacyl-ACP synthase YP_002141295.1 558107 D 554290 CDS YP_002141296.1 197361660 559419..560075 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 560075 554290000482 SSPA0451 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141296.1 559419 D 554290 CDS YP_002141297.1 197361661 complement(560142..560660) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 560660 554290000483 SSPA0452 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141297.1 560142 R 554290 CDS YP_002141298.1 197361662 complement(560660..561028) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 561028 554290000484 SSPA0453 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141298.1 560660 R 554290 CDS YP_002141299.1 197361663 complement(561197..561445) 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 561445 554290000485 SSPA0454 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein YP_002141299.1 561197 R 554290 CDS YP_002141300.1 197361664 561618..561992 1 NC_011147.1 similar to Salmonella typhi CT18 bacteriophage protein; bacteriophage protein 561992 554290000486 SSPA0455 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriophage protein YP_002141300.1 561618 D 554290 CDS YP_002141301.1 197361665 562172..563350 1 NC_011147.1 similar to Salmonella typhi CT18 transmembrane transporter; hypothetical protein 563350 554290000487 SSPA0456 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141301.1 562172 D 554290 CDS YP_002141302.1 197361666 complement(563347..564348) 1 NC_011147.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator 564348 flk 554290000488 flk Salmonella enterica subsp. enterica serovar Paratyphi A str. flagella biosynthesis regulator YP_002141302.1 563347 R 554290 CDS YP_002141303.1 197361667 564452..565588 1 NC_011147.1 similar to Salmonella typhi CT18 erythronate-4-phosphate dehydrogenase; erythronate-4-phosphate dehydrogenase 565588 554290000489 SSPA0458 Salmonella enterica subsp. enterica serovar Paratyphi A str. erythronate-4-phosphate dehydrogenase YP_002141303.1 564452 D 554290 CDS YP_002141304.1 197361668 565656..566669 1 NC_011147.1 similar to Salmonella typhi CT18 semialdehyde dehydrogenase; semialdehyde dehydrogenase 566669 554290000490 SSPA0459 Salmonella enterica subsp. enterica serovar Paratyphi A str. semialdehyde dehydrogenase YP_002141304.1 565656 D 554290 CDS YP_002141305.1 197361669 566669..567481 1 NC_011147.1 'mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability'; tRNA pseudouridine synthase A 567481 truA 554290000491 truA Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA pseudouridine synthase A YP_002141305.1 566669 D 554290 CDS YP_002141306.1 197361670 567530..568189 1 NC_011147.1 similar to Salmonella typhi CT18 DedA protein (dsg-1 protein); hypothetical protein 568189 554290000492 SSPA0461 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141306.1 567530 D 554290 CDS YP_002141307.1 197361671 568339..569253 1 NC_011147.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 569253 554290000493 SSPA0462 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl-CoA carboxylase subunit beta YP_002141307.1 568339 D 554290 CDS YP_002141308.1 197361672 569321..570589 1 NC_011147.1 similar to Salmonella typhi CT18 folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 570589 554290000494 SSPA0463 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_002141308.1 569321 D 554290 CDS YP_002141309.1 197361673 570579..571253 1 NC_011147.1 similar to Salmonella typhi CT18 DedD protein; hypothetical protein 571253 554290000495 SSPA0464 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141309.1 570579 D 554290 CDS YP_002141310.1 197361674 571564..572052 1 NC_011147.1 membrane protein required for colicin V production; colicin V production protein 572052 554290000496 SSPA0465 Salmonella enterica subsp. enterica serovar Paratyphi A str. colicin V production protein YP_002141310.1 571564 D 554290 CDS YP_002141311.1 197361675 572090..573607 1 NC_011147.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 573607 554290000497 SSPA0466 Salmonella enterica subsp. enterica serovar Paratyphi A str. amidophosphoribosyltransferase YP_002141311.1 572090 D 554290 CDS YP_002141312.1 197361676 complement(573643..575070) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 575070 554290000498 SSPA0467 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141312.1 573643 R 554290 CDS YP_002141313.1 197361677 575281..576678 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid decarboxylase; amino acid decarboxylase 576678 554290000499 SSPA0468 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid decarboxylase YP_002141313.1 575281 D 554290 CDS YP_002141314.1 197361678 576769..578190 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid transporter; amino acid transporter 578190 554290000500 SSPA0469 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid transporter YP_002141314.1 576769 D 554290 CDS YP_002141315.1 197361679 578192..579295 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 579295 554290000501 SSPA0470 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141315.1 578192 D 554290 CDS YP_002141316.1 197361680 579359..580765 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid permease; amino acid permease 580765 554290000502 SSPA0471 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid permease YP_002141316.1 579359 D 554290 CDS YP_002141317.1 197361681 580792..581361 1 NC_011147.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 581361 554290000503 SSPA0472 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002141317.1 580792 D 554290 CDS YP_002141318.1 197361682 581650..582432 1 NC_011147.1 similar to Salmonella typhi CT18 lysine-arginine-ornithine-binding periplasmic protein precursor; lysine-arginine-ornithine-binding periplasmic protein 582432 554290000504 SSPA0473 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysine-arginine-ornithine-binding periplasmic protein YP_002141318.1 581650 D 554290 CDS YP_002141319.1 197361683 582670..583452 1 NC_011147.1 similar to Salmonella typhi CT18 histidine-binding periplasmic protein; histidine-binding periplasmic protein 583452 554290000505 SSPA0474 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine-binding periplasmic protein YP_002141319.1 582670 D 554290 CDS YP_002141320.1 197361684 583635..584321 1 NC_011147.1 similar to Salmonella typhi CT18 histidine transport system permease protein; histidine transport system permease 584321 554290000506 SSPA0475 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine transport system permease YP_002141320.1 583635 D 554290 CDS YP_002141321.1 197361685 584318..585025 1 NC_011147.1 similar to Salmonella typhi CT18 histidine transport system permease; histidine transport system permease 585025 554290000507 SSPA0476 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine transport system permease YP_002141321.1 584318 D 554290 CDS YP_002141322.1 197361686 585039..585812 1 NC_011147.1 similar to Salmonella typhi CT18 histidine transport ATP-binding protein; histidine/lysine/arginine/ornithine transporter subunit 585812 554290000508 SSPA0477 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine/lysine/arginine/ornithine transporter subunit YP_002141322.1 585039 D 554290 CDS YP_002141323.1 197361687 complement(585864..586757) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 586757 554290000509 SSPA0478 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141323.1 585864 R 554290 CDS YP_002141324.1 197361688 complement(586883..587530) 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione-S transferase; glutathione-S transferase 587530 554290000510 SSPA0479 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione-S transferase YP_002141324.1 586883 R 554290 CDS YP_002141325.1 197361689 587673..588317 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione-S transferase; glutathione-S transferase 588317 554290000511 SSPA0480 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione-S transferase YP_002141325.1 587673 D 554290 CDS YP_002141326.1 197361690 588373..588924 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; phosphodiesterase 588924 554290000512 SSPA0481 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphodiesterase YP_002141326.1 588373 D 554290 CDS YP_002141327.1 197361691 588981..589535 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 589535 554290000513 SSPA0482 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141327.1 588981 D 554290 CDS YP_002141328.1 197361692 complement(589541..590560) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 590560 554290000514 SSPA0483 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141328.1 589541 R 554290 CDS YP_002141329.1 197361693 590813..591256 1 NC_011147.1 similar to Salmonella typhi CT18 sugar phosphotransferase component II A; sugar phosphotransferase system subunit IIA 591256 554290000515 SSPA0484 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar phosphotransferase system subunit IIA YP_002141329.1 590813 D 554290 CDS YP_002141330.1 197361694 591337..591609 1 NC_011147.1 similar to Salmonella typhi CT18 sugar phosphotransferase component II B; sugar phosphotransferase system subunit IIB 591609 554290000516 SSPA0485 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar phosphotransferase system subunit IIB YP_002141330.1 591337 D 554290 CDS YP_002141331.1 197361695 591630..593021 1 NC_011147.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 593021 ulaA 554290000517 ulaA Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system ascorbate-specific transporter subunit IIC YP_002141331.1 591630 D 554290 CDS YP_002141332.1 197361696 593018..593848 1 NC_011147.1 similar to Salmonella typhi CT18 transketolase N-terminal section; transketolase 593848 554290000518 SSPA0487 Salmonella enterica subsp. enterica serovar Paratyphi A str. transketolase YP_002141332.1 593018 D 554290 CDS YP_002141333.1 197361697 593841..594794 1 NC_011147.1 similar to Salmonella typhi CT18 transketolase C-terminal section; transketolase 594794 554290000519 SSPA0488 Salmonella enterica subsp. enterica serovar Paratyphi A str. transketolase YP_002141333.1 593841 D 554290 CDS YP_002141334.1 197361698 complement(594843..596363) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 596363 554290000520 SSPA0489 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141334.1 594843 R 554290 CDS YP_002141335.1 197361699 complement(596581..598725) 1 NC_011147.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 598725 554290000521 SSPA0490 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate acetyltransferase YP_002141335.1 596581 R 554290 CDS YP_002141336.2 449784916 complement(598802..600004) 1 NC_011147.1 similar to Salmonella typhi CT18 acetate kinase; acetate kinase 600004 554290000522 SSPA0491 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetate kinase YP_002141336.2 598802 R 554290 CDS YP_002141337.1 197361701 600344..600799 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 600799 554290000523 SSPA0492 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141337.1 600344 D 554290 CDS YP_002141338.1 197361702 600882..601376 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 601376 554290000524 SSPA0493 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141338.1 600882 D 554290 CDS YP_002141339.1 197361703 601369..602046 1 NC_011147.1 similar to Salmonella typhi CT18 phosphatase; phosphatase 602046 554290000525 SSPA0494 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatase YP_002141339.1 601369 D 554290 CDS YP_002141340.1 197361704 602122..603948 1 NC_011147.1 similar to Salmonella typhi CT18 sodium/sulphate transporter; sodium/sulfate transporter 603948 554290000526 SSPA0495 Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium/sulfate transporter YP_002141340.1 602122 D 554290 CDS YP_002141341.1 197361705 complement(604054..604653) 1 NC_011147.1 similar to Salmonella typhi CT18 oxetanocin A biosynthetic enzyme; hypothetical protein 604653 554290000527 SSPA0496 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141341.1 604054 R 554290 CDS YP_002141342.1 197361706 complement(604747..605961) 1 NC_011147.1 'broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor'; aminotransferase AlaT 605961 554290000528 SSPA0497 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminotransferase AlaT YP_002141342.1 604747 R 554290 CDS YP_002141343.1 197361707 606893..607828 1 NC_011147.1 similar to Salmonella typhi CT18 NADH dehydrogenase operon transcriptional regulator; NADH dehydrogenase operon transcriptional regulator 607828 554290000529 SSPA0498 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase operon transcriptional regulator YP_002141343.1 606893 D 554290 CDS YP_002141344.1 197361708 607908..608060 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 608060 554290000530 SSPA0499 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141344.1 607908 D 554290 CDS YP_002141345.1 197361709 608455..608898 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 608898 554290000531 SSPA0500 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit A YP_002141345.1 608455 D 554290 CDS YP_002141346.1 197361710 608914..609576 1 NC_011147.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 609576 554290000532 SSPA0501 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit B YP_002141346.1 608914 D 554290 CDS YP_002141347.1 197361711 609663..611465 1 NC_011147.1 'NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms'; NADH:ubiquinone oxidoreductase subunit C/D 611465 554290000533 SSPA0502 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH:ubiquinone oxidoreductase subunit C/D YP_002141347.1 609663 D 554290 CDS YP_002141348.1 197361712 611468..611968 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 611968 554290000534 SSPA0503 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit E YP_002141348.1 611468 D 554290 CDS YP_002141349.1 197361713 611965..613302 1 NC_011147.1 'shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase'; NADH dehydrogenase I subunit F 613302 554290000535 SSPA0504 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase I subunit F YP_002141349.1 611965 D 554290 CDS YP_002141350.1 197361714 613327..616059 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 616059 554290000536 SSPA0505 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit G YP_002141350.1 613327 D 554290 CDS YP_002141351.1 197361715 616056..617033 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 617033 554290000537 SSPA0506 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit H YP_002141351.1 616056 D 554290 CDS YP_002141352.1 197361716 617048..617590 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 617590 554290000538 SSPA0507 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit I YP_002141352.1 617048 D 554290 CDS YP_002141353.1 197361717 617601..618155 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 618155 554290000539 SSPA0508 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit J YP_002141353.1 617601 D 554290 CDS YP_002141354.1 197361718 618152..618454 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 618454 554290000540 SSPA0509 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit K YP_002141354.1 618152 D 554290 CDS YP_002141355.1 197361719 618451..620292 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 620292 554290000541 SSPA0510 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit L YP_002141355.1 618451 D 554290 CDS YP_002141356.1 197361720 620544..622073 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 622073 554290000542 SSPA0511 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit M YP_002141356.1 620544 D 554290 CDS YP_002141357.2 449784917 622080..623537 1 NC_011147.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 623537 554290000543 SSPA0512 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase subunit N YP_002141357.2 622080 D 554290 CDS YP_002141358.1 197361722 complement(623678..624682) 1 NC_011147.1 similar to Salmonella typhi CT18 receptor/regulator protein; receptor/regulator protein 624682 554290000544 SSPA0513 Salmonella enterica subsp. enterica serovar Paratyphi A str. receptor/regulator protein YP_002141358.1 623678 R 554290 CDS YP_002141359.1 197361723 complement(624748..625665) 1 NC_011147.1 member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z 625665 554290000545 SSPA0514 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease Z YP_002141359.1 624748 R 554290 CDS YP_002141360.1 197361724 625726..626187 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 626187 554290000546 SSPA0515 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141360.1 625726 D 554290 CDS YP_002141361.1 197361725 626236..626547 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 626547 554290000547 SSPA0516 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141361.1 626236 D 554290 CDS YP_002141362.1 197361726 626648..627943 1 NC_011147.1 similar to Salmonella typhi CT18 isochorismate synthase; isochorismate synthase 627943 554290000548 SSPA0517 Salmonella enterica subsp. enterica serovar Paratyphi A str. isochorismate synthase YP_002141362.1 626648 D 554290 CDS YP_002141363.1 197361727 628029..629699 1 NC_011147.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 629699 554290000549 SSPA0518 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_002141363.1 628029 D 554290 CDS YP_002141364.1 197361728 629696..630454 1 NC_011147.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 630454 554290000550 SSPA0519 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl-CoA thioester hydrolase YfbB YP_002141364.1 629696 D 554290 CDS YP_002141365.1 197361729 630469..631326 1 NC_011147.1 'catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA'; naphthoate synthase 631326 554290000551 SSPA0520 Salmonella enterica subsp. enterica serovar Paratyphi A str. naphthoate synthase YP_002141365.1 630469 D 554290 CDS YP_002141366.1 197361730 631326..632288 1 NC_011147.1 'catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate'; O-succinylbenzoate synthase 632288 554290000552 SSPA0521 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-succinylbenzoate synthase YP_002141366.1 631326 D 554290 CDS YP_002141367.1 197361731 632285..633652 1 NC_011147.1 similar to Salmonella typhi CT18 O-succinylbenzoic acid-CoA ligase; O-succinylbenzoic acid--CoA ligase 633652 554290000553 SSPA0522 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-succinylbenzoic acid--CoA ligase YP_002141367.1 632285 D 554290 CDS YP_002141368.1 197361732 633750..634007 1 NC_011147.1 similar to Salmonella typhi CT18 polymyxin B resistance protein; polymyxin B resistance protein 634007 554290000554 SSPA0523 Salmonella enterica subsp. enterica serovar Paratyphi A str. polymyxin B resistance protein YP_002141368.1 633750 D 554290 CDS YP_002141369.1 197361733 complement(634002..634379) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 634379 554290000555 SSPA0524 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141369.1 634002 R 554290 CDS YP_002141370.2 449784918 complement(634379..634714) 1 NC_011147.1 hypothetical protein 634714 554290000556 SSPA0525 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141370.2 634379 R 554290 CDS YP_002141371.1 197361735 complement(634711..636357) 1 NC_011147.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 636357 arnT 554290000557 arnT Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-amino-4-deoxy-L-arabinose transferase YP_002141371.1 634711 R 554290 CDS YP_002141372.1 197361736 complement(636354..637253) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 637253 554290000558 SSPA0527 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141372.1 636354 R 554290 CDS YP_002141373.1 197361737 complement(637250..639232) 1 NC_011147.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 639232 554290000559 SSPA0528 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_002141373.1 637250 R 554290 CDS YP_002141374.1 197361738 complement(639229..640212) 1 NC_011147.1 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 640212 554290000560 SSPA0529 Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_002141374.1 639229 R 554290 CDS YP_002141375.1 197361739 complement(640215..641372) 1 NC_011147.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 641372 554290000561 SSPA0530 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_002141375.1 640215 R 554290 CDS YP_002141376.1 197361740 641653..642258 1 NC_011147.1 similar to Salmonella typhi CT18 Ais protein; Ais protein 642258 554290000562 SSPA0531 Salmonella enterica subsp. enterica serovar Paratyphi A str. Ais protein YP_002141376.1 641653 D 554290 CDS YP_002141377.1 197361741 complement(642303..642728) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 642728 554290000563 SSPA0532 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141377.1 642303 R 554290 CDS YP_002141378.1 197361742 642902..643549 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 643549 554290000564 SSPA0533 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141378.1 642902 D 554290 CDS YP_002141379.1 197361743 643664..644860 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; competence damage-inducible protein A 644860 554290000565 SSPA0534 Salmonella enterica subsp. enterica serovar Paratyphi A str. competence damage-inducible protein A YP_002141379.1 643664 D 554290 CDS YP_002141380.1 197361744 645110..645892 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 645892 554290000566 SSPA0535 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141380.1 645110 D 554290 CDS YP_002141381.1 197361745 645894..647111 1 NC_011147.1 similar to Salmonella typhi CT18 MR-MLE-family protein; MR-MLE-family protein 647111 554290000567 SSPA0536 Salmonella enterica subsp. enterica serovar Paratyphi A str. MR-MLE-family protein YP_002141381.1 645894 D 554290 CDS YP_002141382.1 197361746 647167..648456 1 NC_011147.1 similar to Salmonella typhi CT18 transport protein; transporter 648456 554290000568 SSPA0537 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002141382.1 647167 D 554290 CDS YP_002141383.1 197361747 648482..649285 1 NC_011147.1 'similar to Salmonella typhi CT18 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase'; aldolase 649285 554290000569 SSPA0538 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldolase YP_002141383.1 648482 D 554290 CDS YP_002141384.1 197361748 complement(649554..650507) 1 NC_011147.1 'similar to ElaD; specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins; SseL in Salmonella is required for macrophage killing and virulence, and it is secreted by the salmonella pathogenicity island 2 type III secretion system'; deubiquitinase 650507 554290000571 SSPA0541 Salmonella enterica subsp. enterica serovar Paratyphi A str. deubiquitinase YP_002141384.1 649554 R 554290 CDS YP_002141385.1 197361749 complement(650497..650700) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 650700 554290000572 SSPA0542 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141385.1 650497 R 554290 CDS YP_002141386.1 197361750 complement(651002..652192) 1 NC_011147.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 652192 glpC 554290000573 glpC Salmonella enterica subsp. enterica serovar Paratyphi A str. sn-glycerol-3-phosphate dehydrogenase subunit C YP_002141386.1 651002 R 554290 CDS YP_002141387.1 197361751 complement(652189..653448) 1 NC_011147.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 653448 554290000574 SSPA0544 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_002141387.1 652189 R 554290 CDS YP_002141388.1 197361752 complement(653438..655066) 1 NC_011147.1 'anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor'; sn-glycerol-3-phosphate dehydrogenase subunit A 655066 glpA 554290000575 glpA Salmonella enterica subsp. enterica serovar Paratyphi A str. sn-glycerol-3-phosphate dehydrogenase subunit A YP_002141388.1 653438 R 554290 CDS YP_002141389.1 197361753 655339..656697 1 NC_011147.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 656697 glpT 554290000576 glpT Salmonella enterica subsp. enterica serovar Paratyphi A str. sn-glycerol-3-phosphate transporter YP_002141389.1 655339 D 554290 CDS YP_002141390.1 197361754 656702..657772 1 NC_011147.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 657772 glpQ 554290000577 glpQ Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerophosphodiester phosphodiesterase YP_002141390.1 656702 D 554290 CDS YP_002141391.1 197361755 complement(657888..658766) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 658766 554290000578 SSPA0548 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141391.1 657888 R 554290 CDS YP_002141392.1 197361756 658928..660118 1 NC_011147.1 similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 660118 554290000579 SSPA0549 Salmonella enterica subsp. enterica serovar Paratyphi A str. transmembrane transport protein YP_002141392.1 658928 D 554290 CDS YP_002141393.1 197361757 complement(660120..660374) 1 NC_011147.1 'plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases'; 2Fe-2S ferredoxin 660374 554290000580 SSPA0550 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2Fe-2S ferredoxin YP_002141393.1 660120 R 554290 CDS YP_002141394.1 197361758 complement(660374..661504) 1 NC_011147.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 661504 nrdB 554290000581 nrdB Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleotide-diphosphate reductase subunit beta YP_002141394.1 660374 R 554290 CDS YP_002141395.1 197361759 complement(661617..663902) 1 NC_011147.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 663902 554290000582 SSPA0552 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleotide-diphosphate reductase subunit alpha YP_002141395.1 661617 R 554290 CDS YP_002141396.1 197361760 complement(664258..664986) 1 NC_011147.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 664986 554290000583 SSPA0553 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-demethylubiquinone-9 3-methyltransferase YP_002141396.1 664258 R 554290 CDS YP_002141397.1 197361761 complement(665069..665764) 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 665764 554290000584 SSPA0554 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141397.1 665069 R 554290 CDS YP_002141398.1 197361762 666003..667328 1 NC_011147.1 similar to |17548403|ref|NP_521743.1| PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN [Ralstonia solanacearum GMI1000]; hypothetical protein 667328 554290000585 SSPA0555 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141398.1 666003 D 554290 CDS YP_002141399.1 197361763 667343..668545 1 NC_011147.1 similar to Salmonella typhi CT18 MR-MLE-family protein; MR-MLE-family protein 668545 554290000586 SSPA0556 Salmonella enterica subsp. enterica serovar Paratyphi A str. MR-MLE-family protein YP_002141399.1 667343 D 554290 CDS YP_002141400.1 197361764 668955..671591 1 NC_011147.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 671591 554290000587 SSPA0557 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA gyrase subunit A YP_002141400.1 668955 D 554290 CDS YP_002141401.1 197361765 671709..674555 1 NC_011147.1 similar to Salmonella typhi CT18 sensor protein RcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 674555 554290000588 SSPA0558 Salmonella enterica subsp. enterica serovar Paratyphi A str. hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_002141401.1 671709 D 554290 CDS YP_002141402.1 197361766 complement(674658..675308) 1 NC_011147.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 675308 554290000589 SSPA0559 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator RcsB YP_002141402.1 674658 R 554290 CDS YP_002141403.1 197361767 complement(675325..677994) 1 NC_011147.1 similar to Salmonella typhi CT18 two-component system sensor kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 677994 554290000590 SSPA0560 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_002141403.1 675325 R 554290 CDS YP_002141404.2 449784919 678723..679859 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein C; outer membrane protein C 679859 554290000592 SSPA0561 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein C YP_002141404.2 678723 D 554290 CDS YP_002141405.1 197361769 679974..681026 1 NC_011147.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 681026 554290000593 SSPA0562 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine biosynthesis lipoprotein ApbE YP_002141405.1 679974 D 554290 CDS YP_002141406.1 197361770 681107..682168 1 NC_011147.1 similar to Salmonella typhi CT18 ADA regulatory protein; ADA regulatory protein 682168 554290000594 SSPA0563 Salmonella enterica subsp. enterica serovar Paratyphi A str. ADA regulatory protein YP_002141406.1 681107 D 554290 CDS YP_002141407.1 197361771 682171..682821 1 NC_011147.1 similar to Salmonella typhi CT18 AlkB protein; AlkB protein 682821 554290000595 SSPA0564 Salmonella enterica subsp. enterica serovar Paratyphi A str. AlkB protein YP_002141407.1 682171 D 554290 CDS YP_002141408.1 197361772 682897..684540 1 NC_011147.1 efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane protein/ATP-binding protein 684540 554290000596 SSPA0565 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug transporter membrane protein/ATP-binding protein YP_002141408.1 682897 D 554290 CDS YP_002141409.1 197361773 complement(684749..685243) 1 NC_011147.1 'serine protease inhibitor, inhibits trypsin and other proteases'; ecotin 685243 554290000597 SSPA0566 Salmonella enterica subsp. enterica serovar Paratyphi A str. ecotin YP_002141409.1 684749 R 554290 CDS YP_002141410.1 197361774 685657..686148 1 NC_011147.1 Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.; ferredoxin-type protein 686148 554290000598 SSPA0567 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferredoxin-type protein YP_002141410.1 685657 D 554290 CDS YP_002141411.1 197361775 686138..686401 1 NC_011147.1 similar to Salmonella typhi Ty2 napAB assembly protein; assembly protein for periplasmic nitrate reductase 686401 554290000599 SSPA0568 Salmonella enterica subsp. enterica serovar Paratyphi A str. assembly protein for periplasmic nitrate reductase YP_002141411.1 686138 D 554290 CDS YP_002141412.1 197361776 686398..688884 1 NC_011147.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 688884 554290000600 SSPA0569 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrate reductase catalytic subunit YP_002141412.1 686398 D 554290 CDS YP_002141413.1 197361777 688891..689586 1 NC_011147.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic protein 689586 napG 554290000601 napG Salmonella enterica subsp. enterica serovar Paratyphi A str. quinol dehydrogenase periplasmic protein YP_002141413.1 688891 D 554290 CDS YP_002141414.1 197361778 689573..690442 1 NC_011147.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane protein 690442 napH 554290000602 napH Salmonella enterica subsp. enterica serovar Paratyphi A str. quinol dehydrogenase membrane protein YP_002141414.1 689573 D 554290 CDS YP_002141415.1 197361779 690558..691007 1 NC_011147.1 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit 691007 napB 554290000603 napB Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate reductase cytochrome c-type subunit YP_002141415.1 690558 D 554290 CDS YP_002141416.1 197361780 691017..691619 1 NC_011147.1 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC 691619 554290000604 SSPA0573 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type protein NapC YP_002141416.1 691017 D 554290 CDS YP_002141417.1 197361781 691640..692257 1 NC_011147.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 692257 554290000605 SSPA0574 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c biogenesis protein CcmA YP_002141417.1 691640 D 554290 CDS YP_002141418.1 197361782 692965..693702 1 NC_011147.1 similar to Salmonella typhi Ty2 heme exporter protein C1; heme exporter protein C1 693702 554290000606 SSPA0575 Salmonella enterica subsp. enterica serovar Paratyphi A str. heme exporter protein C1 YP_002141418.1 692965 D 554290 CDS YP_002141419.1 197361783 693699..693911 1 NC_011147.1 heme exporter protein D1 693911 ccmD1 554290000607 ccmD1 Salmonella enterica subsp. enterica serovar Paratyphi A str. heme exporter protein D1 YP_002141419.1 693699 D 554290 CDS YP_002141420.1 197361784 693908..694387 1 NC_011147.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 694387 554290000608 SSPA0577 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type biogenesis protein CcmE YP_002141420.1 693908 D 554290 CDS YP_002141421.1 197361785 694384..696315 1 NC_011147.1 similar to Salmonella typhi Ty2 cytochrome c-type biogenesis protein F1; cytochrome c-type biogenesis protein F1 696315 554290000609 SSPA0578 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type biogenesis protein F1 YP_002141421.1 694384 D 554290 CDS YP_002141422.1 197361786 696312..696869 1 NC_011147.1 thiol:disulfide interchange protein 696869 dsbE1 554290000610 dsbE1 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiol:disulfide interchange protein YP_002141422.1 696312 D 554290 CDS YP_002141423.1 197361787 complement(697858..698505) 1 NC_011147.1 nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; transcriptional regulator NarP 698505 554290000612 SSPA0580 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator NarP YP_002141423.1 697858 R 554290 CDS YP_002141424.2 449784920 699211..699798 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 699798 554290000613 SSPA0581 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141424.2 699211 D 554290 CDS YP_002141425.1 197361789 complement(699991..700194) 1 NC_011147.1 similar to Salmonella typhi CT18 homolog of virulence protein msgA; virulence protein MsgA-like protein 700194 554290000614 SSPA0582 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence protein MsgA-like protein YP_002141425.1 699991 R 554290 CDS YP_002141426.1 197361790 complement(700386..702146) 1 NC_011147.1 similar to Salmonella typhi CT18 sulphatase; sulfatase 702146 554290000615 SSPA0583 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfatase YP_002141426.1 700386 R 554290 CDS YP_002141427.1 197361791 complement(702178..702405) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 702405 554290000616 SSPA0584 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141427.1 702178 R 554290 CDS YP_002141428.1 197361792 702585..703592 1 NC_011147.1 similar to Salmonella typhi CT18 nucleoid-asociated protein; nucleoid-associated protein NdpA 703592 554290000617 SSPA0585 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoid-associated protein NdpA YP_002141428.1 702585 D 554290 CDS YP_002141429.1 197361793 703620..704240 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 704240 554290000618 SSPA0586 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141429.1 703620 D 554290 CDS YP_002141430.1 197361794 complement(704349..704633) 1 NC_011147.1 'the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response'; 50S ribosomal protein L25 704633 554290000619 SSPA0587 Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L25 YP_002141430.1 704349 R 554290 CDS YP_002141431.1 197361795 complement(704758..706518) 1 NC_011147.1 similar to Salmonella typhi CT18 helicase; helicase 706518 554290000620 SSPA0588 Salmonella enterica subsp. enterica serovar Paratyphi A str. helicase YP_002141431.1 704758 R 554290 CDS YP_002141432.1 197361796 706670..707365 1 NC_011147.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 707365 554290000621 SSPA0589 Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S rRNA pseudouridylate synthase A YP_002141432.1 706670 D 554290 CDS YP_002141433.1 197361797 707393..708583 1 NC_011147.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 708583 554290000622 SSPA0590 Salmonella enterica subsp. enterica serovar Paratyphi A str. bicyclomycin/multidrug efflux system protein YP_002141433.1 707393 D 554290 CDS YP_002141434.1 197361798 708580..708678 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 708678 554290000623 SSPA0591 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141434.1 708580 D 554290 CDS YP_002141435.1 197361799 708974..709318 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 709318 554290000624 SSPA0592 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141435.1 708974 D 554290 CDS YP_002141436.1 197361800 complement(709322..710911) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC-transporter ATP-binding protein; ABC transporter ATP-binding protein 710911 554290000625 SSPA0593 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002141436.1 709322 R 554290 CDS YP_002141437.1 197361801 complement(710913..711938) 1 NC_011147.1 similar to Salmonella typhi CT18 binding-protein-dependent transporter; binding-protein-dependent transporter 711938 554290000626 SSPA0594 Salmonella enterica subsp. enterica serovar Paratyphi A str. binding-protein-dependent transporter YP_002141437.1 710913 R 554290 CDS YP_002141438.1 197361802 complement(711938..713032) 1 NC_011147.1 similar to Salmonella typhi CT18 binding-protein-dependent transporter; binding-protein-dependent transporter 713032 554290000627 SSPA0595 Salmonella enterica subsp. enterica serovar Paratyphi A str. binding-protein-dependent transporter YP_002141438.1 711938 R 554290 CDS YP_002141439.2 449784921 complement(713042..714847) 1 NC_011147.1 similar to Salmonella typhi CT18 transport system periplasmic binding protein; transport system periplasmic binding protein 714847 554290000628 SSPA0596 Salmonella enterica subsp. enterica serovar Paratyphi A str. transport system periplasmic binding protein YP_002141439.2 713042 R 554290 CDS YP_002141440.1 197361804 complement(714954..716510) 1 NC_011147.1 similar to Salmonella typhi CT18 rtn protein; hypothetical protein 716510 554290000629 SSPA0597 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141440.1 714954 R 554290 CDS YP_002141441.1 197361805 complement(716836..717408) 1 NC_011147.1 'by similarity, Spr seems to have peptidase activity; involved in thermoresistance'; outer membrane lipoprotein 717408 spr 554290000630 spr Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein YP_002141441.1 716836 R 554290 CDS YP_002141442.1 197361806 complement(717822..718535) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 718535 554290000631 SSPA0599 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141442.1 717822 R 554290 CDS YP_002141443.1 197361807 complement(718571..719557) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 719557 554290000632 SSPA0600 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141443.1 718571 R 554290 CDS YP_002141444.2 449784922 complement(719769..720341) 1 NC_011147.1 'Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein'; elongation factor P 720341 554290000633 SSPA0601 Salmonella enterica subsp. enterica serovar Paratyphi A str. elongation factor P YP_002141444.2 719769 R 554290 CDS YP_002141445.1 197361809 complement(720476..720853) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 720853 554290000634 SSPA0602 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141445.1 720476 R 554290 CDS YP_002141446.1 197361810 721459..721581 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 721581 554290000635 SSPA0603 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141446.1 721459 D 554290 CDS YP_002141447.1 197361811 721583..722248 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 722248 554290000636 SSPA0604 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141447.1 721583 D 554290 CDS YP_002141448.1 197361812 complement(722313..723494) 1 NC_011147.1 similar to Salmonella typhi Ty2 sugar efflux transporter; sugar efflux transporter 723494 554290000637 SSPA0605 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar efflux transporter YP_002141448.1 722313 R 554290 CDS YP_002141449.1 197361813 723863..724993 1 NC_011147.1 'phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr'; PTS system fructose-specific transporter subunit IIA/HPr protein 724993 554290000638 SSPA0606 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system fructose-specific transporter subunit IIA/HPr protein YP_002141449.1 723863 D 554290 CDS YP_002141450.2 449784923 724993..725931 1 NC_011147.1 'converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers'; 1-phosphofructokinase 725931 fruK 554290000639 fruK Salmonella enterica subsp. enterica serovar Paratyphi A str. 1-phosphofructokinase YP_002141450.2 724993 D 554290 CDS YP_002141451.1 197361815 725948..727636 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 727636 554290000640 SSPA0608 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system fructose-specific transporter subunit IIBC YP_002141451.1 725948 D 554290 CDS YP_002141452.1 197361816 complement(727691..728548) 1 NC_011147.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 728548 554290000641 SSPA0609 Salmonella enterica subsp. enterica serovar Paratyphi A str. endonuclease IV YP_002141452.1 727691 R 554290 CDS YP_002141453.1 197361817 complement(728627..729676) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 729676 554290000642 SSPA0610 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141453.1 728627 R 554290 CDS YP_002141454.1 197361818 729797..730660 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; DNA-binding transcriptional regulator 730660 554290000643 SSPA0611 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002141454.1 729797 D 554290 CDS YP_002141455.1 197361819 730850..732319 1 NC_011147.1 similar to Salmonella typhi CT18 lysine-specific permease; lysine transporter 732319 554290000644 SSPA0612 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysine transporter YP_002141455.1 730850 D 554290 CDS YP_002141456.1 197361820 732664..734655 1 NC_011147.1 'Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein'; colicin I receptor 734655 554290000645 SSPA0613 Salmonella enterica subsp. enterica serovar Paratyphi A str. colicin I receptor YP_002141456.1 732664 D 554290 CDS YP_002141457.1 197361821 complement(734699..736021) 1 NC_011147.1 similar to |16124132|ref|NP_407445.1| regulatory protein [Yersinia pestis]; hypothetical protein 736021 554290000646 SSPA0614 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141457.1 734699 R 554290 CDS YP_002141458.1 197361822 complement(736054..736941) 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hydrolase 736941 554290000647 SSPA0615 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002141458.1 736054 R 554290 CDS YP_002141459.1 197361823 738530..738919 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 738919 554290000649 SSPA0616 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein YP_002141459.1 738530 D 554290 CDS YP_002141460.1 197361824 complement(738908..739765) 1 NC_011147.1 similar to Salmonella typhi CT18 esterase; esterase 739765 554290000650 SSPA0617 Salmonella enterica subsp. enterica serovar Paratyphi A str. esterase YP_002141460.1 738908 R 554290 CDS YP_002141461.1 197361825 740095..740763 1 NC_011147.1 'involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer'; GTP cyclohydrolase I 740763 folE 554290000651 folE Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP cyclohydrolase I YP_002141461.1 740095 D 554290 CDS YP_002141462.1 197361826 740778..741920 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 741920 554290000652 SSPA0619 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141462.1 740778 D 554290 CDS YP_002141463.1 197361827 742070..743092 1 NC_011147.1 negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS 743092 554290000653 SSPA0620 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator GalS YP_002141463.1 742070 D 554290 CDS YP_002141464.1 197361828 743591..744589 1 NC_011147.1 similar to Salmonella typhi CT18 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 744589 554290000654 SSPA0621 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-galactose-binding periplasmic protein YP_002141464.1 743591 D 554290 CDS YP_002141465.1 197361829 746259..747269 1 NC_011147.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein 747269 mglC 554290000656 mglC Salmonella enterica subsp. enterica serovar Paratyphi A str. beta-methylgalactoside transporter inner membrane protein YP_002141465.1 746259 D 554290 CDS YP_002141466.1 197361830 complement(747344..748579) 1 NC_011147.1 'catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines'; dihydropyrimidine dehydrogenase 748579 554290000657 SSPA0623 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydropyrimidine dehydrogenase YP_002141466.1 747344 R 554290 CDS YP_002141467.1 197361831 complement(748573..749814) 1 NC_011147.1 function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase 749814 554290000658 SSPA0624 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002141467.1 748573 R 554290 CDS YP_002141468.1 197361832 complement(750019..750264) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 750264 554290000659 SSPA0625 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141468.1 750019 R 554290 CDS YP_002141469.1 197361833 complement(750261..750980) 1 NC_011147.1 similar to Salmonella typhi CT18 vancomycin resistance protein; hypothetical protein 750980 554290000660 SSPA0626 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141469.1 750261 R 554290 CDS YP_002141470.1 197361834 complement(751157..752041) 1 NC_011147.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 752041 554290000661 SSPA0627 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytidine deaminase YP_002141470.1 751157 R 554290 CDS YP_002141471.1 197361835 complement(752195..752890) 1 NC_011147.1 similar to Salmonella typhi CT18 puatative membrane protein; hypothetical protein 752890 554290000662 SSPA0628 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141471.1 752195 R 554290 CDS YP_002141472.1 197361836 complement(752887..753285) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 753285 554290000663 SSPA0629 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141472.1 752887 R 554290 CDS YP_002141473.1 197361837 complement(753417..754325) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 754325 554290000664 SSPA0630 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141473.1 753417 R 554290 CDS YP_002141474.1 197361838 754451..755809 1 NC_011147.1 similar to Salmonella typhi CT18 n-hydroxybenzoate transporter; n-hydroxybenzoate transporter 755809 554290000665 SSPA0631 Salmonella enterica subsp. enterica serovar Paratyphi A str. n-hydroxybenzoate transporter YP_002141474.1 754451 D 554290 CDS YP_002141475.1 197361839 755821..756858 1 NC_011147.1 'similar to Salmonella typhi CT18 gentisate 1,2-dioxygenase'; gentisate 1,2-dioxygenase 756858 554290000666 SSPA0632 Salmonella enterica subsp. enterica serovar Paratyphi A str. gentisate 1,2-dioxygenase YP_002141475.1 755821 D 554290 CDS YP_002141476.1 197361840 756874..757575 1 NC_011147.1 similar to Salmonella typhi CT18 FAA-hydrolase-family protein; FAA-hydrolase-family protein 757575 554290000667 SSPA0633 Salmonella enterica subsp. enterica serovar Paratyphi A str. FAA-hydrolase-family protein YP_002141476.1 756874 D 554290 CDS YP_002141477.1 197361841 757584..758228 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione-S-transferase-family protein; glutathione-S-transferase-family protein 758228 554290000668 SSPA0634 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione-S-transferase-family protein YP_002141477.1 757584 D 554290 CDS YP_002141478.1 197361842 758243..759436 1 NC_011147.1 catalyzes the formation of catechol from salicylate; salicylate hydroxylase 759436 554290000669 SSPA0635 Salmonella enterica subsp. enterica serovar Paratyphi A str. salicylate hydroxylase YP_002141478.1 758243 D 554290 CDS YP_002141479.1 197361843 759545..760483 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; tRNA-dihydrouridine synthase C 760483 554290000670 SSPA0636 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA-dihydrouridine synthase C YP_002141479.1 759545 D 554290 CDS YP_002141480.1 197361844 complement(760554..760751) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 760751 554290000671 SSPA0637 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141480.1 760554 R 554290 CDS YP_002141481.1 197361845 760943..762379 1 NC_011147.1 'may be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride'; multidrug resistance outer membrane protein MdtQ 762379 554290000672 SSPA0638 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug resistance outer membrane protein MdtQ YP_002141481.1 760943 D 554290 CDS YP_002141482.1 197361846 762445..763206 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; acetoin dehydrogenase 763206 554290000673 SSPA0639 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetoin dehydrogenase YP_002141482.1 762445 D 554290 CDS YP_002141483.1 197361847 complement(763255..763851) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 763851 554290000674 SSPA0640 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141483.1 763255 R 554290 CDS YP_002141484.1 197361848 763983..764570 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 764570 554290000675 SSPA0641 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141484.1 763983 D 554290 CDS YP_002141485.1 197361849 764775..765683 1 NC_011147.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 765683 pbpG 554290000676 pbpG Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanyl-D-alanine endopeptidase YP_002141485.1 764775 D 554290 CDS YP_002141486.1 197361850 complement(765742..767472) 1 NC_011147.1 'component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent'; D-lactate dehydrogenase 767472 554290000677 SSPA0643 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-lactate dehydrogenase YP_002141486.1 765742 R 554290 CDS YP_002141487.1 197361851 767739..770045 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic beta-glucosidase precursor; beta-glucosidase 770045 554290000678 SSPA0644 Salmonella enterica subsp. enterica serovar Paratyphi A str. beta-glucosidase YP_002141487.1 767739 D 554290 CDS YP_002141488.1 197361852 770226..771143 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic protein; hypothetical protein 771143 554290000679 SSPA0645 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141488.1 770226 D 554290 CDS YP_002141489.1 197361853 771147..772316 1 NC_011147.1 similar to Salmonella typhi CT18 permease transmembrane component; permease 772316 554290000680 SSPA0646 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease YP_002141489.1 771147 D 554290 CDS YP_002141490.1 197361854 772309..773256 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 773256 554290000681 SSPA0647 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002141490.1 772309 D 554290 CDS YP_002141491.1 197361855 773240..773971 1 NC_011147.1 similar to Salmonella typhi CT18 permease transmembrane component; permease 773971 554290000682 SSPA0648 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease YP_002141491.1 773240 D 554290 CDS YP_002141492.1 197361856 complement(773952..774059) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 774059 554290000683 SSPA0649 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141492.1 773952 R 554290 CDS YP_002141493.1 197361857 complement(774119..774850) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 774850 554290000684 SSPA0650 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141493.1 774119 R 554290 CDS YP_002141494.1 197361858 775073..776758 1 NC_011147.1 similar to Salmonella typhi CT18 two-component system sensor kinase; two-component system sensor kinase 776758 554290000685 SSPA0651 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component system sensor kinase YP_002141494.1 775073 D 554290 CDS YP_002141495.1 197361859 776755..777474 1 NC_011147.1 unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT 777474 554290000686 SSPA0652 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component response-regulatory protein YehT YP_002141495.1 776755 D 554290 CDS YP_002141496.1 197361860 777521..777988 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 777988 554290000687 SSPA0653 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141496.1 777521 D 554290 CDS YP_002141497.1 197361861 complement(778045..778575) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 778575 554290000688 SSPA0654 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141497.1 778045 R 554290 CDS YP_002141498.1 197361862 complement(778747..779205) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 779205 554290000689 SSPA0655 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141498.1 778747 R 554290 CDS YP_002141499.1 197361863 complement(779446..781479) 1 NC_011147.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 781479 metG 554290000690 metG Salmonella enterica subsp. enterica serovar Paratyphi A str. methionyl-tRNA synthetase YP_002141499.1 779446 R 554290 CDS YP_002141500.1 197361864 781644..782753 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; ATPase 782753 554290000691 SSPA0657 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATPase YP_002141500.1 781644 D 554290 CDS YP_002141501.1 197361865 783031..783312 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 783312 554290000692 SSPA0658 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141501.1 783031 D 554290 CDS YP_002141502.1 197361866 783591..784124 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial subunit protein; fimbrial subunit protein 784124 554290000693 SSPA0659 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit protein YP_002141502.1 783591 D 554290 CDS YP_002141503.1 197361867 784186..784866 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 784866 554290000694 SSPA0660 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002141503.1 784186 D 554290 CDS YP_002141504.1 197361868 784895..787381 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane usher protein; outer membrane usher protein 787381 554290000695 SSPA0661 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane usher protein YP_002141504.1 784895 D 554290 CDS YP_002141505.1 197361869 787397..788419 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 788419 554290000696 SSPA0662 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141505.1 787397 D 554290 CDS YP_002141506.1 197361870 complement(788463..788777) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 788777 554290000697 SSPA0663 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141506.1 788463 R 554290 CDS YP_002141507.1 197361871 789187..789984 1 NC_011147.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 789984 554290000698 SSPA0664 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroxyethylthiazole kinase YP_002141507.1 789187 D 554290 CDS YP_002141508.1 197361872 789971..790771 1 NC_011147.1 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 790771 554290000699 SSPA0665 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphomethylpyrimidine kinase YP_002141508.1 789971 D 554290 CDS YP_002141509.1 197361873 790807..791553 1 NC_011147.1 similar to Salmonella typhi Ty2 GntR-family transcriptional regulator; GntR family transcriptional regulator 791553 554290000700 SSPA0666 Salmonella enterica subsp. enterica serovar Paratyphi A str. GntR family transcriptional regulator YP_002141509.1 790807 D 554290 CDS YP_002141510.2 449784924 complement(791527..792492) 1 NC_011147.1 similar to Salmonella typhi CT18 sugar kinase; sugar kinase 792492 554290000701 SSPA0667 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar kinase YP_002141510.2 791527 R 554290 CDS YP_002141511.1 197361875 complement(792489..793493) 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hydrolase 793493 554290000702 SSPA0668 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002141511.1 792489 R 554290 CDS YP_002141512.1 197361876 complement(793490..794761) 1 NC_011147.1 similar to Salmonella typhi CT18 nucleoside permease; nucleoside permease 794761 554290000703 SSPA0669 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside permease YP_002141512.1 793490 R 554290 CDS YP_002141513.1 197361877 795015..796067 1 NC_011147.1 'catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate'; fructose-bisphosphate aldolase 796067 554290000704 SSPA0670 Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose-bisphosphate aldolase YP_002141513.1 795015 D 554290 CDS YP_002141514.1 197361878 complement(796120..797019) 1 NC_011147.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 797019 554290000705 SSPA0671 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipid kinase YP_002141514.1 796120 R 554290 CDS YP_002141515.1 197361879 797584..797919 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 797919 554290000706 SSPA0672 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141515.1 797584 D 554290 CDS YP_002141516.1 197361880 798041..798457 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 798457 554290000707 SSPA0673 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141516.1 798041 D 554290 CDS YP_002141517.1 197361881 complement(798416..798607) 1 NC_011147.1 hypothetical protein 798607 554290000708 SSPA0674 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141517.1 798416 R 554290 CDS YP_002141518.1 197361882 complement(799074..800435) 1 NC_011147.1 similar to Salmonella typhi CT18 protease; protease 800435 554290000709 SSPA0675 Salmonella enterica subsp. enterica serovar Paratyphi A str. protease YP_002141518.1 799074 R 554290 CDS YP_002141519.1 197361883 800599..801216 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 801216 554290000710 SSPA0676 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141519.1 800599 D 554290 CDS YP_002141520.1 197361884 801534..801632 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 801632 554290000711 SSPA0677 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141520.1 801534 D 554290 CDS YP_002141521.1 197361885 801872..802291 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 802291 554290000712 SSPA0678 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141521.1 801872 D 554290 CDS YP_002141522.1 197361886 802728..803090 1 NC_011147.1 similar to |2126036|pir||I69804 hypothetical protein rhsF [imported] - Escherichia coli (fragment); hypothetical protein 803090 554290000714 SSPA0679 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141522.1 802728 D 554290 CDS YP_002141523.1 197361887 803100..803402 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 803402 554290000715 SSPA0680 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141523.1 803100 D 554290 CDS YP_002141524.1 197361888 803532..804032 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 804032 554290000716 SSPA0681 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141524.1 803532 D 554290 CDS YP_002141525.1 197361889 804160..804642 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 804642 554290000717 SSPA0682 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141525.1 804160 D 554290 CDS YP_002141526.1 197361890 804860..805138 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 805138 554290000718 SSPA0683 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141526.1 804860 D 554290 CDS YP_002141527.1 197361891 805207..805809 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 805809 554290000719 SSPA0684 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141527.1 805207 D 554290 CDS YP_002141528.1 197361892 805919..806398 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 806398 554290000720 SSPA0685 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141528.1 805919 D 554290 CDS YP_002141529.1 197361893 806466..806930 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 806930 554290000721 SSPA0686 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141529.1 806466 D 554290 CDS YP_002141530.1 197361894 807031..807474 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 807474 554290000722 SSPA0687 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141530.1 807031 D 554290 CDS YP_002141531.1 197361895 807586..808314 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 808314 554290000723 SSPA0688 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141531.1 807586 D 554290 CDS YP_008144948.1 516595076 complement(808445..809128) 1 NC_011147.1 hypothetical protein 809128 554290000724 SSPA0689 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_008144948.1 808445 R 554290 CDS YP_002141532.1 197361896 complement(809168..811279) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 811279 554290000725 SSPA0690 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141532.1 809168 R 554290 CDS YP_002141533.1 197361897 complement(811290..811985) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 811985 554290000726 SSPA0691 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141533.1 811290 R 554290 CDS YP_002141534.1 197361898 complement(812007..812891) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 812891 554290000727 SSPA0692 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141534.1 812007 R 554290 CDS YP_002141535.1 197361899 complement(813478..814200) 1 NC_011147.1 'response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport'; DNA-binding transcriptional regulator BaeR 814200 554290000728 SSPA0693 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator BaeR YP_002141535.1 813478 R 554290 CDS YP_002141536.1 197361900 complement(814197..815600) 1 NC_011147.1 similar to Salmonella typhi CT18 two-component system sensor kinase; signal transduction histidine-protein kinase BaeS 815600 554290000729 SSPA0694 Salmonella enterica subsp. enterica serovar Paratyphi A str. signal transduction histidine-protein kinase BaeS YP_002141536.1 814197 R 554290 CDS YP_002141537.1 197361901 complement(815600..817012) 1 NC_011147.1 similar to Salmonella typhi CT18 transporter protein; multidrug efflux system protein MdtE 817012 554290000730 SSPA0695 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug efflux system protein MdtE YP_002141537.1 815600 R 554290 CDS YP_002141538.1 197361902 complement(817009..820089) 1 NC_011147.1 'Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate'; multidrug efflux system subunit MdtC 820089 554290000731 SSPA0696 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug efflux system subunit MdtC YP_002141538.1 817009 R 554290 CDS YP_007443149.1 449784925 complement(820090..823212) 1 NC_011147.1 multidrug efflux system subunit MdtB 823212 554290000732 SSPA0697 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug efflux system subunit MdtB YP_007443149.1 820090 R 554290 CDS YP_002141540.1 197361903 complement(824869..826221) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; chaperone 826221 554290000735 SSPA0698 Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone YP_002141540.1 824869 R 554290 CDS YP_002141541.1 197361904 826355..827224 1 NC_011147.1 'inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine'; 3-methyladenine DNA glycosylase 827224 554290000736 SSPA0699 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-methyladenine DNA glycosylase YP_002141541.1 826355 D 554290 CDS YP_002141542.1 197361905 complement(827192..830182) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 830182 554290000737 SSPA0700 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141542.1 827192 R 554290 CDS YP_002141543.1 197361906 830513..831154 1 NC_011147.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 831154 554290000738 SSPA0701 Salmonella enterica subsp. enterica serovar Paratyphi A str. uridine kinase YP_002141543.1 830513 D 554290 CDS YP_002141544.1 197361907 831245..831826 1 NC_011147.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 831826 dcd 554290000739 dcd Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxycytidine triphosphate deaminase YP_002141544.1 831245 D 554290 CDS YP_002141545.1 197361908 831865..833721 1 NC_011147.1 'YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs'; assembly protein 833721 554290000740 SSPA0703 Salmonella enterica subsp. enterica serovar Paratyphi A str. assembly protein YP_002141545.1 831865 D 554290 CDS YP_002141546.1 197361909 complement(833816..835375) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 835375 554290000741 SSPA0704 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141546.1 833816 R 554290 CDS YP_002141547.2 449784926 836050..837189 1 NC_011147.1 similar to Salmonella typhi CT18 polysaccharide export protein; polysaccharide export protein 837189 554290000742 SSPA0705 Salmonella enterica subsp. enterica serovar Paratyphi A str. polysaccharide export protein YP_002141547.2 836050 D 554290 CDS YP_002141548.1 197361911 837195..837644 1 NC_011147.1 'Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis'; tyrosine phosphatase 837644 554290000743 SSPA0706 Salmonella enterica subsp. enterica serovar Paratyphi A str. tyrosine phosphatase YP_002141548.1 837195 D 554290 CDS YP_002141549.1 197361912 837641..839800 1 NC_011147.1 Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); tyrosine kinase 839800 554290000744 SSPA0707 Salmonella enterica subsp. enterica serovar Paratyphi A str. tyrosine kinase YP_002141549.1 837641 D 554290 CDS YP_002141550.1 197361913 840731..841219 1 NC_011147.1 'acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium'; colanic acid biosynthesis acetyltransferase WcaB 841219 554290000746 SSPA0709 Salmonella enterica subsp. enterica serovar Paratyphi A str. colanic acid biosynthesis acetyltransferase WcaB YP_002141550.1 840731 D 554290 CDS YP_002141551.1 197361914 841216..842433 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyltransferase; glycosyl transferase family protein 842433 554290000747 SSPA0710 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002141551.1 841216 D 554290 CDS YP_002141552.1 197361915 842408..843622 1 NC_011147.1 essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance; colanic acid biosynthesis protein 843622 wcaD 554290000748 wcaD Salmonella enterica subsp. enterica serovar Paratyphi A str. colanic acid biosynthesis protein YP_002141552.1 842408 D 554290 CDS YP_002141553.1 197361916 843635..844381 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyltransferase; glycosyl transferase family protein 844381 554290000749 SSPA0712 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002141553.1 843635 D 554290 CDS YP_002141554.1 197361917 844397..844951 1 NC_011147.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); colanic acid biosynthesis acetyltransferase WcaF 844951 554290000750 SSPA0713 Salmonella enterica subsp. enterica serovar Paratyphi A str. colanic acid biosynthesis acetyltransferase WcaF YP_002141554.1 844397 D 554290 CDS YP_002141555.1 197361918 844975..846096 1 NC_011147.1 'similar to Salmonella typhi CT18 GDP-mannose 4,6-dehydratase'; GDP-mannose 4,6-dehydratase 846096 554290000751 SSPA0714 Salmonella enterica subsp. enterica serovar Paratyphi A str. GDP-mannose 4,6-dehydratase YP_002141555.1 844975 D 554290 CDS YP_002141556.1 197361919 846099..847064 1 NC_011147.1 similar to Salmonella typhi Ty2 GDP-fucose synthetase; GDP-fucose synthetase 847064 554290000752 SSPA0715 Salmonella enterica subsp. enterica serovar Paratyphi A str. GDP-fucose synthetase YP_002141556.1 846099 D 554290 CDS YP_002141557.1 197361920 847067..847540 1 NC_011147.1 similar to Salmonella typhi CT18 O-antigen biosynthesis protein; O-antigen biosynthesis protein 847540 554290000753 SSPA0716 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-antigen biosynthesis protein YP_002141557.1 847067 D 554290 CDS YP_002141558.1 197361921 847537..848760 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyltransferase; glycosyl transferase family protein 848760 554290000754 SSPA0717 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002141558.1 847537 D 554290 CDS YP_002141559.1 197361922 848757..850199 1 NC_011147.1 similar to Salmonella typhi CT18 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 850199 554290000755 SSPA0718 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannose-1-phosphate guanylyltransferase YP_002141559.1 848757 D 554290 CDS YP_002141560.1 197361923 850310..851680 1 NC_011147.1 similar to Salmonella typhi Ty2 phosphomannomutase; phosphomannomutase 851680 554290000756 SSPA0719 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphomannomutase YP_002141560.1 850310 D 554290 CDS YP_002141561.1 197361924 853230..854708 1 NC_011147.1 similar to Salmonella typhi CT18 transmembrane transport protein; colanic acid exporter 854708 554290000758 SSPA0720 Salmonella enterica subsp. enterica serovar Paratyphi A str. colanic acid exporter YP_002141561.1 853230 D 554290 CDS YP_002141562.1 197361925 856007..857146 1 NC_011147.1 similar to Salmonella typhimurium glycosyl transferase in colanic acid gene cluster; glycosyl transferase family protein 857146 554290000760 SSPA0721 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002141562.1 856007 D 554290 CDS YP_002141563.1 197361926 857157..858560 1 NC_011147.1 WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; colanic acid biosynthesis protein 858560 wcaM 554290000761 wcaM Salmonella enterica subsp. enterica serovar Paratyphi A str. colanic acid biosynthesis protein YP_002141563.1 857157 D 554290 CDS YP_002141564.1 197361927 860008..861093 1 NC_011147.1 NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose; dTDP-glucose 4,6 dehydratase 861093 554290000763 SSPA0723 Salmonella enterica subsp. enterica serovar Paratyphi A str. dTDP-glucose 4,6 dehydratase YP_002141564.1 860008 D 554290 CDS YP_002141565.1 197361928 861093..861992 1 NC_011147.1 'with dTDP-4-dehydrorhamnose 3,5-epimerase forms a complex known as dTDP-L-rhamnose synthetase; catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose'; dTDP-4-dehydrorhamnose reductase 861992 554290000764 SSPA0724 Salmonella enterica subsp. enterica serovar Paratyphi A str. dTDP-4-dehydrorhamnose reductase YP_002141565.1 861093 D 554290 CDS YP_002141566.1 197361929 862040..862918 1 NC_011147.1 similar to Salmonella typhi CT18 TDP-glucose pyrophosphorylase; TDP-glucose pyrophosphorylase 862918 554290000765 SSPA0725 Salmonella enterica subsp. enterica serovar Paratyphi A str. TDP-glucose pyrophosphorylase YP_002141566.1 862040 D 554290 CDS YP_002141567.1 197361930 862928..863470 1 NC_011147.1 'similar to Salmonella typhi CT18 dTDP-4-dehydrorhamnose 3,5-epimerase'; dTDP-4-dehydrorhamnose 3,5-epimerase 863470 554290000766 SSPA0726 Salmonella enterica subsp. enterica serovar Paratyphi A str. dTDP-4-dehydrorhamnose 3,5-epimerase YP_002141567.1 862928 D 554290 CDS YP_002141568.1 197361931 863476..864450 1 NC_011147.1 'catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose'; CDP-6-deoxy-delta-3,4-glucoseen reductase 864450 554290000767 SSPA0727 Salmonella enterica subsp. enterica serovar Paratyphi A str. CDP-6-deoxy-delta-3,4-glucoseen reductase YP_002141568.1 863476 D 554290 CDS YP_002141569.1 197361932 864466..865239 1 NC_011147.1 similar to Salmonella typhi CT18 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 865239 554290000768 SSPA0728 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose-1-phosphate cytidylyltransferase YP_002141569.1 864466 D 554290 CDS YP_002141570.1 197361933 865244..866323 1 NC_011147.1 'similar to Salmonella typhi CT18 CDP-glucose 4,6-dehydratase'; CDP-glucose 4,6-dehydratase 866323 554290000769 SSPA0729 Salmonella enterica subsp. enterica serovar Paratyphi A str. CDP-glucose 4,6-dehydratase YP_002141570.1 865244 D 554290 CDS YP_002141571.1 197361934 866350..867663 1 NC_011147.1 similar to Salmonella typhi CT18 dehydratase RfbH; dehydratase RfbH 867663 554290000770 SSPA0730 Salmonella enterica subsp. enterica serovar Paratyphi A str. dehydratase RfbH YP_002141571.1 866350 D 554290 CDS YP_002141572.1 197361935 867699..868538 1 NC_011147.1 similar to Salmonella typhi Ty2 paratose synthase; paratose synthase 868538 554290000771 SSPA0731 Salmonella enterica subsp. enterica serovar Paratyphi A str. paratose synthase YP_002141572.1 867699 D 554290 CDS YP_002141574.1 197361937 869621..870919 1 NC_011147.1 O-antigen transporter 870919 rfbX 554290000773 rfbX Salmonella enterica subsp. enterica serovar Paratyphi A str. O-antigen transporter YP_002141574.1 869621 D 554290 CDS YP_002141575.1 197361938 870921..871922 1 NC_011147.1 similar to Salmonella typhi Ty2 glycosyl transferase; glycosyl transferase family protein 871922 554290000774 SSPA0734 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002141575.1 870921 D 554290 CDS YP_002141576.1 197361939 872497..873558 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyltransferase; glycosyltransferase 873558 554290000775 SSPA0735 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyltransferase YP_002141576.1 872497 D 554290 CDS YP_002141577.1 197361940 873559..874503 1 NC_011147.1 similar to Salmonella typhi CT18 rhamnosyltransferase; rhamnosyltransferase 874503 554290000776 SSPA0736 Salmonella enterica subsp. enterica serovar Paratyphi A str. rhamnosyltransferase YP_002141577.1 873559 D 554290 CDS YP_002141578.1 197361941 874504..875943 1 NC_011147.1 similar to Salmonella typhi Ty2 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 875943 554290000777 SSPA0737 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannose-1-phosphate guanylyltransferase YP_002141578.1 874504 D 554290 CDS YP_002141579.1 197361942 875930..877363 1 NC_011147.1 similar to Salmonella typhi CT18 phosphomannomutase; phosphomannomutase 877363 554290000778 SSPA0738 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphomannomutase YP_002141579.1 875930 D 554290 CDS YP_002141580.1 197361943 877435..878865 1 NC_011147.1 similar to Salmonella typhi CT18 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate galactosephosphotransferase 878865 554290000779 SSPA0739 Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyl-phosphate galactosephosphotransferase YP_002141580.1 877435 D 554290 CDS YP_002141581.1 197361944 879029..880435 1 NC_011147.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 880435 554290000780 SSPA0740 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-phosphogluconate dehydrogenase YP_002141581.1 879029 D 554290 CDS YP_002141582.1 197361945 880672..881838 1 NC_011147.1 similar to Salmonella typhi Ty2 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 881838 554290000781 SSPA0741 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-glucose 6-dehydrogenase YP_002141582.1 880672 D 554290 CDS YP_002141583.1 197361946 881987..882964 1 NC_011147.1 similar to Salmonella typhi Ty2 polysaccharide chain length regulator; polysaccharide chain length regulator 882964 554290000782 SSPA0742 Salmonella enterica subsp. enterica serovar Paratyphi A str. polysaccharide chain length regulator YP_002141583.1 881987 D 554290 CDS YP_002141584.1 197361947 complement(883045..883656) 1 NC_011147.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 883656 554290000783 SSPA0743 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_002141584.1 883045 R 554290 CDS YP_002141585.1 197361948 complement(883650..884426) 1 NC_011147.1 'catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase'; imidazole glycerol phosphate synthase subunit HisF 884426 554290000784 SSPA0744 Salmonella enterica subsp. enterica serovar Paratyphi A str. imidazole glycerol phosphate synthase subunit HisF YP_002141585.1 883650 R 554290 CDS YP_002141586.1 197361949 complement(884408..885145) 1 NC_011147.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 885145 554290000785 SSPA0745 Salmonella enterica subsp. enterica serovar Paratyphi A str. 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002141586.1 884408 R 554290 CDS YP_002141587.1 197361950 complement(885145..885735) 1 NC_011147.1 'with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide'; imidazole glycerol phosphate synthase subunit HisH 885735 hisH 554290000786 hisH Salmonella enterica subsp. enterica serovar Paratyphi A str. imidazole glycerol phosphate synthase subunit HisH YP_002141587.1 885145 R 554290 CDS YP_002141588.1 197361951 complement(885735..886802) 1 NC_011147.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 886802 554290000787 SSPA0747 Salmonella enterica subsp. enterica serovar Paratyphi A str. imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_002141588.1 885735 R 554290 CDS YP_002141589.1 197361952 complement(886799..887878) 1 NC_011147.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 887878 554290000788 SSPA0748 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidinol-phosphate aminotransferase YP_002141589.1 886799 R 554290 CDS YP_002141590.1 197361953 complement(887875..889179) 1 NC_011147.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 889179 hisD 554290000789 hisD Salmonella enterica subsp. enterica serovar Paratyphi A str. histidinol dehydrogenase YP_002141590.1 887875 R 554290 CDS YP_002141591.1 197361954 complement(889282..890181) 1 NC_011147.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 890181 hisG 554290000790 hisG Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP phosphoribosyltransferase YP_002141591.1 889282 R 554290 CDS YP_002141592.1 197361955 890540..891364 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 891364 554290000791 SSPA0751 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141592.1 890540 D 554290 CDS YP_002141593.1 197361956 891410..892324 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 892324 554290000792 SSPA0752 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141593.1 891410 D 554290 CDS YP_002141594.1 197361957 892604..893968 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid transporter protein; amino acid transporter protein 893968 554290000793 SSPA0753 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid transporter protein YP_002141594.1 892604 D 554290 CDS YP_002141595.1 197361958 complement(894104..895534) 1 NC_011147.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 895534 sbcB 554290000794 sbcB Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease I YP_002141595.1 894104 R 554290 CDS YP_002141596.1 197361959 901153..901731 1 NC_011147.1 similar to Salmonella typhi CT18 thiosulfate reductase electron transport protein PhsB; thiosulfate reductase electron transport protein PhsB 901731 554290000797 SSPA0755 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiosulfate reductase electron transport protein PhsB YP_002141596.1 901153 D 554290 CDS YP_002141597.1 197361960 901728..902492 1 NC_011147.1 similar to Salmonella typhi CT18 thiosulfate reductase cytochrome b subunit; thiosulfate reductase cytochrome b subunit 902492 554290000798 SSPA0756 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiosulfate reductase cytochrome b subunit YP_002141597.1 901728 D 554290 CDS YP_002141598.1 197361961 903938..904405 1 NC_011147.1 similar to Salmonella typhi CT18 DNA gyrase inhibitory protein; DNA gyrase inhibitor 904405 554290000800 SSPA0757 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA gyrase inhibitor YP_002141598.1 903938 D 554290 CDS YP_002141599.1 197361962 904524..905582 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 905582 554290000801 SSPA0758 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141599.1 904524 D 554290 CDS YP_002141600.1 197361963 905827..906162 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 906162 554290000802 SSPA0759 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141600.1 905827 D 554290 CDS YP_002141601.1 197361964 complement(906196..907098) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 907098 554290000803 SSPA0760 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141601.1 906196 R 554290 CDS YP_002141602.1 197361965 complement(907156..908370) 1 NC_011147.1 'involved in coenzyme B(12)-dependent 1, 2-propanediol degradation; important for the synthesis of propionyl coenzyme A during growth on 1,2-propanediol'; propionate kinase 908370 554290000804 SSPA0761 Salmonella enterica subsp. enterica serovar Paratyphi A str. propionate kinase YP_002141602.1 907156 R 554290 CDS YP_002141603.1 197361966 complement(908355..908807) 1 NC_011147.1 similar to Salmonella typhi CT18 propanediol utilization protein PduV; propanediol utilization protein PduV 908807 554290000805 SSPA0762 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduV YP_002141603.1 908355 R 554290 CDS YP_002141604.1 197361967 complement(908812..909162) 1 NC_011147.1 similar to Salmonella typhi CT18 propanediol utilization protein PduU; propanediol utilization protein PduU 909162 554290000806 SSPA0763 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduU YP_002141604.1 908812 R 554290 CDS YP_002141605.1 197361968 complement(909162..909716) 1 NC_011147.1 similar to Salmonella typhi CT18 propanediol utilization protein PduT; propanediol utilization protein PduT 909716 554290000807 SSPA0764 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduT YP_002141605.1 909162 R 554290 CDS YP_002141606.1 197361969 complement(909719..911047) 1 NC_011147.1 similar to Salmonella typhi CT18 ferredoxin; ferredoxin 911047 554290000808 SSPA0765 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferredoxin YP_002141606.1 909719 R 554290 CDS YP_002141607.1 197361970 complement(911071..912183) 1 NC_011147.1 similar to Salmonella typhi CT18 propanol dehydrogenase; propanol dehydrogenase 912183 554290000809 SSPA0766 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanol dehydrogenase YP_002141607.1 911071 R 554290 CDS YP_002141608.1 197361971 complement(912195..913589) 1 NC_011147.1 similar to Salmonella typhi CT18 CoA-dependent proprionaldehyde dehydrogenase; CoA-dependent proprionaldehyde dehydrogenase 913589 554290000810 SSPA0767 Salmonella enterica subsp. enterica serovar Paratyphi A str. CoA-dependent proprionaldehyde dehydrogenase YP_002141608.1 912195 R 554290 CDS YP_002141609.1 197361972 complement(913586..914596) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 914596 554290000811 SSPA0768 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141609.1 913586 R 554290 CDS YP_002141610.1 197361973 complement(914606..914881) 1 NC_011147.1 similar to Salmonella typhimurium Propanediol utilization: polyhedral bodies; propanediol utilization polyhedral bodies protein 914881 554290000812 SSPA0769 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization polyhedral bodies protein YP_002141610.1 914606 R 554290 CDS YP_002141611.1 197361974 complement(914885..915376) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 915376 554290000813 SSPA0770 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141611.1 914885 R 554290 CDS YP_002141612.1 197361975 complement(915373..916005) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 916005 554290000814 SSPA0771 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141612.1 915373 R 554290 CDS YP_002141613.1 197361976 complement(916005..916487) 1 NC_011147.1 similar to Salmonella typhi CT18 propanediol utilization protein PduK; propanediol utilization protein PduK 916487 554290000815 SSPA0772 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduK YP_002141613.1 916005 R 554290 CDS YP_002141614.1 197361977 complement(916491..916766) 1 NC_011147.1 similar to Salmonella typhi CT18 propanediol utilization protein PduJ; propanediol utilization protein PduJ 916766 554290000816 SSPA0773 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduJ YP_002141614.1 916491 R 554290 CDS YP_002141615.1 197361978 complement(916785..917135) 1 NC_011147.1 similar to Salmonella typhi CT18 PduH protein; PduH protein 917135 554290000817 SSPA0774 Salmonella enterica subsp. enterica serovar Paratyphi A str. PduH protein YP_002141615.1 916785 R 554290 CDS YP_002141616.1 197361979 complement(918993..919514) 1 NC_011147.1 similar to Salmonella typhi CT18 diol dehydratase small subunit; diol dehydratase small subunit 919514 554290000819 SSPA0776 Salmonella enterica subsp. enterica serovar Paratyphi A str. diol dehydratase small subunit YP_002141616.1 918993 R 554290 CDS YP_002141617.1 197361980 complement(919529..920203) 1 NC_011147.1 similar to Salmonella typhi CT18 diol dehydratase medium subunit; diol dehydratase medium subunit 920203 554290000820 SSPA0777 Salmonella enterica subsp. enterica serovar Paratyphi A str. diol dehydratase medium subunit YP_002141617.1 919529 R 554290 CDS YP_002141618.1 197361981 complement(920214..921878) 1 NC_011147.1 similar to Salmonella typhi CT18 glycerol dehydratase large subunit; glycerol dehydratase large subunit 921878 554290000821 SSPA0778 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol dehydratase large subunit YP_002141618.1 920214 R 554290 CDS YP_002141619.1 197361982 complement(921897..922598) 1 NC_011147.1 similar to Salmonella typhi Ty2 propanediol utilization protein PduB; propanediol utilization protein PduB 922598 554290000822 SSPA0779 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduB YP_002141619.1 921897 R 554290 CDS YP_002141620.1 197361983 complement(922706..922990) 1 NC_011147.1 similar to Salmonella typhi CT18 propanediol utilization protein PduA; propanediol utilization protein PduA 922990 554290000823 SSPA0780 Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol utilization protein PduA YP_002141620.1 922706 R 554290 CDS YP_002141621.1 197361984 923227..924189 1 NC_011147.1 propanediol diffusion facilitator 924189 pduF 554290000824 pduF Salmonella enterica subsp. enterica serovar Paratyphi A str. propanediol diffusion facilitator YP_002141621.1 923227 D 554290 CDS YP_002141622.1 197361985 924491..925438 1 NC_011147.1 similar to Salmonella typhi CT18 pdu/cob regulatory protein PocR; pdu/cob regulatory protein PocR 925438 554290000825 SSPA0781 Salmonella enterica subsp. enterica serovar Paratyphi A str. pdu/cob regulatory protein PocR YP_002141622.1 924491 D 554290 CDS YP_008144949.1 516595077 926036..927415 1 NC_011147.1 cobyrinic acid a,c-diamide synthase 927415 cbiA 554290000826 cbiA Salmonella enterica subsp. enterica serovar Paratyphi A str. cobyrinic acid a,c-diamide synthase YP_008144949.1 926036 D 554290 CDS YP_002141623.1 197361986 927412..928371 1 NC_011147.1 CobD; CbiB in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 928371 cbiB 554290000827 cbiB Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalamin biosynthesis protein YP_002141623.1 927412 D 554290 CDS YP_002141624.1 197361987 928382..929014 1 NC_011147.1 catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase 929014 cbiC 554290000828 cbiC Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt-precorrin-8X methylmutase YP_002141624.1 928382 D 554290 CDS YP_002141625.1 197361988 929014..930153 1 NC_011147.1 Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 930153 cbiD 554290000829 cbiD Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt-precorrin-6A synthase YP_002141625.1 929014 D 554290 CDS YP_002141626.1 197361989 930147..930752 1 NC_011147.1 catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase 930752 554290000830 SSPA0785 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt-precorrin-6Y C(5)-methyltransferase YP_002141626.1 930147 D 554290 CDS YP_002141627.1 197361990 930742..931320 1 NC_011147.1 catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase 931320 554290000831 SSPA0786 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt-precorrin-6Y C(15)-methyltransferase YP_002141627.1 930742 D 554290 CDS YP_002141628.1 197361991 931304..932077 1 NC_011147.1 similar to Salmonella typhi CT18 precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase 932077 554290000832 SSPA0787 Salmonella enterica subsp. enterica serovar Paratyphi A str. precorrin-4 C(11)-methyltransferase YP_002141628.1 931304 D 554290 CDS YP_002141629.1 197361992 932058..933113 1 NC_011147.1 catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 933113 554290000833 SSPA0788 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalamin biosynthesis protein CbiG YP_002141629.1 932058 D 554290 CDS YP_002141630.1 197361993 933113..933838 1 NC_011147.1 similar to Salmonella typhi CT18 precorrin-3 C17-methyltransferase; precorrin-3 C17-methyltransferase 933838 554290000834 SSPA0789 Salmonella enterica subsp. enterica serovar Paratyphi A str. precorrin-3 C17-methyltransferase YP_002141630.1 933113 D 554290 CDS YP_002141631.1 197361994 933835..934626 1 NC_011147.1 'CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6'; cobalt-precorrin-6x reductase 934626 554290000835 SSPA0790 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt-precorrin-6x reductase YP_002141631.1 933835 D 554290 CDS YP_002141632.1 197361995 934629..935420 1 NC_011147.1 similar to Salmonella typhimurium synthesis of vitamin B12 adenosyl cobalamide precursor; vitamin B12 adenosyl cobalamide biosynthesis protein 935420 554290000836 SSPA0791 Salmonella enterica subsp. enterica serovar Paratyphi A str. vitamin B12 adenosyl cobalamide biosynthesis protein YP_002141632.1 934629 D 554290 CDS YP_002141633.2 449784927 935417..936130 1 NC_011147.1 catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 936130 554290000837 SSPA0792 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt-precorrin-2 C(20)-methyltransferase YP_002141633.2 935417 D 554290 CDS YP_002141634.1 197361997 936127..936864 1 NC_011147.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 936864 554290000838 SSPA0793 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt transport protein CbiM YP_002141634.1 936127 D 554290 CDS YP_002141635.1 197361998 936866..937147 1 NC_011147.1 periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN 937147 554290000839 SSPA0794 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt transport protein CbiN YP_002141635.1 936866 D 554290 CDS YP_002141636.1 197361999 937134..937811 1 NC_011147.1 similar to Salmonella typhi Ty2 cobalt transport protein CbiQ; cobalt transport protein CbiQ 937811 554290000840 SSPA0795 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt transport protein CbiQ YP_002141636.1 937134 D 554290 CDS YP_002141637.1 197362000 937820..938635 1 NC_011147.1 with CbiNQ forms the ABC transporter for cobalt import; cobalt transporter ATP-binding subunit 938635 cbiO 554290000841 cbiO Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalt transporter ATP-binding subunit YP_002141637.1 937820 D 554290 CDS YP_002141638.1 197362001 938632..940152 1 NC_011147.1 'catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation'; cobyric acid synthase 940152 554290000842 SSPA0797 Salmonella enterica subsp. enterica serovar Paratyphi A str. cobyric acid synthase YP_002141638.1 938632 D 554290 CDS YP_002141639.1 197362002 940149..940694 1 NC_011147.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 940694 cobU 554290000843 cobU Salmonella enterica subsp. enterica serovar Paratyphi A str. adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase YP_002141639.1 940149 D 554290 CDS YP_002141640.1 197362003 940691..941434 1 NC_011147.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 941434 cobS 554290000844 cobS Salmonella enterica subsp. enterica serovar Paratyphi A str. cobalamin synthase YP_002141640.1 940691 D 554290 CDS YP_002141641.1 197362004 941461..942531 1 NC_011147.1 'catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole'; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 942531 cobT 554290000845 cobT Salmonella enterica subsp. enterica serovar Paratyphi A str. nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_002141641.1 941461 D 554290 CDS YP_002141642.1 197362005 942609..943538 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 943538 554290000846 SSPA0801 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141642.1 942609 D 554290 CDS YP_002141643.1 197362006 943589..943759 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 943759 554290000847 SSPA0802 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141643.1 943589 D 554290 CDS YP_002141644.1 197362007 943999..945456 1 NC_011147.1 1 bp insertion in Paratyphi A strain ATCC9150 causes frameshift in SPA0859; hypothetical protein 945456 554290000849 SSPA0802a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141644.1 943999 D 554290 CDS YP_002141645.1 197362008 complement(945677..945835) 1 NC_011147.1 hypothetical protein 945835 554290000851 SSPA0803 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141645.1 945677 R 554290 CDS YP_002141646.1 197362009 946170..946556 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 946556 554290000852 SSPA0804 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141646.1 946170 D 554290 CDS YP_002141647.1 197362010 946550..946876 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 946876 554290000853 SSPA0805 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141647.1 946550 D 554290 CDS YP_002141648.1 197362011 complement(946865..947026) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 947026 554290000854 SSPA0806 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141648.1 946865 R 554290 CDS YP_002141649.1 197362012 947072..948526 1 NC_011147.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 948526 554290000855 SSPA0807 Salmonella enterica subsp. enterica serovar Paratyphi A str. AMP nucleosidase YP_002141649.1 947072 D 554290 CDS YP_002141650.1 197362013 949226..949399 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 949399 554290000857 SSPA0808 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141650.1 949226 D 554290 CDS YP_002141651.1 197362014 949402..949578 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 949578 554290000858 SSPA0809 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141651.1 949402 D 554290 CDS YP_002141652.1 197362015 complement(949828..950625) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 950625 554290000860 SSPA0810 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141652.1 949828 R 554290 CDS YP_002141653.1 197362016 951106..951267 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 951267 554290000862 SSPA0811 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141653.1 951106 D 554290 CDS YP_002141654.1 197362017 951394..951813 1 NC_011147.1 binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; DNA polymerase V subunit UmuD 951813 554290000863 SSPA0812 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase V subunit UmuD YP_002141654.1 951394 D 554290 CDS YP_002141655.1 197362018 951816..953084 1 NC_011147.1 binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; DNA polymerase V subunit UmuC 953084 umuC 554290000864 umuC Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase V subunit UmuC YP_002141655.1 951816 D 554290 CDS YP_002141656.1 197362019 953530..953742 1 NC_011147.1 similar to Salmonella typhi CT18 cold shock protein; cold shock protein 953742 554290000865 SSPA0814 Salmonella enterica subsp. enterica serovar Paratyphi A str. cold shock protein YP_002141656.1 953530 D 554290 CDS YP_002141657.1 197362020 complement(954202..955380) 1 NC_011147.1 similar to Salmonella typhi Ty2 outer membrane protein S1; outer membrane protein S1 955380 554290000866 SSPA0816 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein S1 YP_002141657.1 954202 R 554290 CDS YP_002141658.1 197362021 956421..957116 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 957116 554290000868 SSPA0817 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141658.1 956421 D 554290 CDS YP_002141659.1 197362022 957190..958620 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-cytosine methyltransferase; DNA cytosine methylase 958620 554290000869 SSPA0818 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA cytosine methylase YP_002141659.1 957190 D 554290 CDS YP_002141660.1 197362023 958601..959071 1 NC_011147.1 similar to Salmonella typhi CT18 patch repair protein; patch repair protein 959071 554290000870 SSPA0819 Salmonella enterica subsp. enterica serovar Paratyphi A str. patch repair protein YP_002141660.1 958601 D 554290 CDS YP_002141661.1 197362024 complement(959060..959980) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 959980 554290000871 SSPA0820 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141661.1 959060 R 554290 CDS YP_002141662.1 197362025 960156..961067 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; hypothetical protein 961067 554290000872 SSPA0821 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141662.1 960156 D 554290 CDS YP_002141663.1 197362026 961084..961329 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 961329 554290000873 SSPA0822 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141663.1 961084 D 554290 CDS YP_002141664.1 197362027 961494..963206 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 963206 554290000874 SSPA0823 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141664.1 961494 D 554290 CDS YP_002141665.1 197362028 complement(963185..964000) 1 NC_011147.1 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; mannosyl-3-phosphoglycerate phosphatase 964000 554290000875 SSPA0824 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannosyl-3-phosphoglycerate phosphatase YP_002141665.1 963185 R 554290 CDS YP_002141666.1 197362029 complement(964310..964537) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 964537 554290000876 SSPA0825 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141666.1 964310 R 554290 CDS YP_002141667.1 197362030 964663..964860 1 NC_011147.1 similar to Salmonella typhi Ty2 DsrB protein; hypothetical protein 964860 554290000877 SSPA0826 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141667.1 964663 D 554290 CDS YP_002141668.1 197362031 complement(964899..965522) 1 NC_011147.1 similar to Salmonella typhi CT18 colanic acid capsullar biosynthesis activation protein A; colanic acid capsullar biosynthesis activation protein A 965522 554290000878 SSPA0827 Salmonella enterica subsp. enterica serovar Paratyphi A str. colanic acid capsullar biosynthesis activation protein A YP_002141668.1 964899 R 554290 CDS YP_002141669.1 197362032 complement(965804..966598) 1 NC_011147.1 'FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus'; flagellar biosynthesis protein FliR 966598 fliR 554290000879 fliR Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FliR YP_002141669.1 965804 R 554290 CDS YP_002141670.1 197362033 complement(966607..966876) 1 NC_011147.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 966876 fliQ 554290000880 fliQ Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FliQ YP_002141670.1 966607 R 554290 CDS YP_002141671.1 197362034 complement(966886..967623) 1 NC_011147.1 'FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus'; flagellar biosynthesis protein FliP 967623 fliP 554290000881 fliP Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FliP YP_002141671.1 966886 R 554290 CDS YP_002141672.1 197362035 complement(967623..968000) 1 NC_011147.1 'with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus'; flagellar biosynthesis protein FliO 968000 554290000882 SSPA0831 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FliO YP_002141672.1 967623 R 554290 CDS YP_002141673.1 197362036 complement(968000..968413) 1 NC_011147.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN 968413 fliN 554290000883 fliN Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar motor switch protein FliN YP_002141673.1 968000 R 554290 CDS YP_002141674.1 197362037 complement(968410..969414) 1 NC_011147.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 969414 fliM 554290000884 fliM Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar motor switch protein FliM YP_002141674.1 968410 R 554290 CDS YP_002141675.1 197362038 complement(969419..969886) 1 NC_011147.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 969886 fliL 554290000885 fliL Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body-associated protein FliL YP_002141675.1 969419 R 554290 CDS YP_002141676.1 197362039 complement(969991..971214) 1 NC_011147.1 similar to Salmonella typhi CT18 flagellar hook-length control protein; flagellar hook-length control protein 971214 554290000886 SSPA0835 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar hook-length control protein YP_002141676.1 969991 R 554290 CDS YP_002141677.1 197362040 complement(971211..971654) 1 NC_011147.1 rod/hook and filament chaperone; flagellar biosynthesis chaperone 971654 fliJ 554290000887 fliJ Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis chaperone YP_002141677.1 971211 R 554290 CDS YP_002141678.1 197362041 complement(971676..973046) 1 NC_011147.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 973046 fliI 554290000888 fliI Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellum-specific ATP synthase YP_002141678.1 971676 R 554290 CDS YP_002141679.1 197362042 complement(973046..973753) 1 NC_011147.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 973753 fliH 554290000889 fliH Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar assembly protein H YP_002141679.1 973046 R 554290 CDS YP_002141680.1 197362043 complement(973746..974741) 1 NC_011147.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 974741 fliG 554290000890 fliG Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar motor switch protein G YP_002141680.1 973746 R 554290 CDS YP_002141681.1 197362044 complement(974734..976425) 1 NC_011147.1 'the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod'; flagellar MS-ring protein 976425 fliF 554290000891 fliF Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar MS-ring protein YP_002141681.1 974734 R 554290 CDS YP_002141682.1 197362045 976642..976956 1 NC_011147.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 976956 fliE 554290000892 fliE Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar hook-basal body protein FliE YP_002141682.1 976642 D 554290 CDS YP_002141683.1 197362046 complement(977077..977430) 1 NC_011147.1 hypothetical protein 977430 554290000893 SSPA0842 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141683.1 977077 R 554290 CDS YP_002141684.1 197362047 complement(977729..977962) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 977962 554290000894 SSPA0843 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141684.1 977729 R 554290 CDS YP_002141685.1 197362048 complement(977959..979224) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; inner membrane protein 979224 554290000895 SSPA0844 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002141685.1 977959 R 554290 CDS YP_002141686.1 197362049 979350..979751 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 979751 554290000896 SSPA0845 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141686.1 979350 D 554290 CDS YP_002141687.1 197362050 complement(979791..981275) 1 NC_011147.1 'converts 1,4-alpha-D-glucans to maltodextrin'; alpha-amylase 981275 554290000897 SSPA0846 Salmonella enterica subsp. enterica serovar Paratyphi A str. alpha-amylase YP_002141687.1 979791 R 554290 CDS YP_002141688.1 197362051 complement(981347..981715) 1 NC_011147.1 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT 981715 554290000898 SSPA0847 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FliT YP_002141688.1 981347 R 554290 CDS YP_002141689.1 197362052 complement(981715..982122) 1 NC_011147.1 flagellin specific chaperone; flagellar protein FliS 982122 fliS 554290000899 fliS Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar protein FliS YP_002141689.1 981715 R 554290 CDS YP_002141690.1 197362053 complement(982137..983540) 1 NC_011147.1 involved in flagellin assembly; flagellar capping protein 983540 fliD 554290000900 fliD Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar capping protein YP_002141690.1 982137 R 554290 CDS YP_002141691.1 197362054 983797..985284 1 NC_011147.1 'structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes'; flagellin 985284 554290000901 SSPA0850 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellin YP_002141691.1 983797 D 554290 CDS YP_002141692.1 197362055 986794..987483 1 NC_011147.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 987483 fliA 554290000903 fliA Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis sigma factor YP_002141692.1 986794 D 554290 CDS YP_002141693.1 197362056 987542..988093 1 NC_011147.1 'expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence'; flagella biosynthesis protein FliZ 988093 554290000904 SSPA0852 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagella biosynthesis protein FliZ YP_002141693.1 987542 D 554290 CDS YP_002141694.1 197362057 988240..989040 1 NC_011147.1 similar to Salmonella typhi CT18 cystine-binding periplasmic protein precursor; cystine transporter subunit 989040 554290000905 SSPA0853 Salmonella enterica subsp. enterica serovar Paratyphi A str. cystine transporter subunit YP_002141694.1 988240 D 554290 CDS YP_002141695.1 197362058 989194..990180 1 NC_011147.1 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 990180 554290000906 SSPA0854 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-cysteine desulfhydrase YP_002141695.1 989194 D 554290 CDS YP_002141696.1 197362059 990201..990869 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter membrane protein; ABC transporter membrane protein 990869 554290000907 SSPA0855 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter membrane protein YP_002141696.1 990201 D 554290 CDS YP_002141697.1 197362060 990866..991618 1 NC_011147.1 similar to Salmonella typhi Ty2 ABC transport ATP-binding protein; amino-acid ABC transporter ATP-binding protein YecC 991618 554290000908 SSPA0856 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino-acid ABC transporter ATP-binding protein YecC YP_002141697.1 990866 D 554290 CDS YP_002141698.1 197362061 991851..992573 1 NC_011147.1 regulates genes involved in cell division; DNA-binding transcriptional activator SdiA 992573 554290000909 SSPA0857 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator SdiA YP_002141698.1 991851 D 554290 CDS YP_002141699.1 197362062 complement(992640..992864) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 992864 554290000910 SSPA0858 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141699.1 992640 R 554290 CDS YP_002141700.1 197362063 complement(992861..993016) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 993016 554290000911 SSPA0859 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141700.1 992861 R 554290 CDS YP_002141701.1 197362064 993328..993984 1 NC_011147.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 993984 554290000912 SSPA0860 Salmonella enterica subsp. enterica serovar Paratyphi A str. response regulator YP_002141701.1 993328 D 554290 CDS YP_002141702.1 197362065 993981..995813 1 NC_011147.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 995813 uvrC 554290000913 uvrC Salmonella enterica subsp. enterica serovar Paratyphi A str. excinuclease ABC subunit C YP_002141702.1 993981 D 554290 CDS YP_002141703.1 197362066 995870..996418 1 NC_011147.1 similar to Salmonella typhi CT18 phosphotidylglycerophosphate synthetase; phosphatidylglycerophosphate synthetase 996418 554290000914 SSPA0862 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatidylglycerophosphate synthetase YP_002141703.1 995870 D 554290 CDS YP_002141704.1 197362067 997119..997451 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 997451 554290000915 SSPA0863 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002141704.1 997119 D 554290 CDS YP_002141705.1 197362068 997671..999104 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 999104 554290000916 SSPA0864 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141705.1 997671 D 554290 CDS YP_002141706.1 197362069 999317..999643 1 NC_011147.1 similar to Salmonella typhimurium glucose-6-phosphate dehydrogenase; glucose-6-phosphate dehydrogenase 999643 554290000917 SSPA0865 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose-6-phosphate dehydrogenase YP_002141706.1 999317 D 554290 CDS YP_002141707.1 197362070 999882..1000547 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1000547 554290000918 SSPA0866 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141707.1 999882 D 554290 CDS YP_002141708.1 197362071 complement(1000622..1001833) 1 NC_011147.1 similar to Salmonella typhi CT18 tyrosine-specific transport protein; tyrosine-specific transport protein 1001833 554290000919 SSPA0867 Salmonella enterica subsp. enterica serovar Paratyphi A str. tyrosine-specific transport protein YP_002141708.1 1000622 R 554290 CDS YP_002141709.1 197362072 1002060..1002299 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1002299 554290000920 SSPA0868 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141709.1 1002060 D 554290 CDS YP_002141710.1 197362073 complement(1002345..1002842) 1 NC_011147.1 cytoplasmic iron storage protein; ferritin 1002842 554290000921 SSPA0869 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferritin YP_002141710.1 1002345 R 554290 CDS YP_002141711.1 197362074 complement(1003082..1003417) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1003417 554290000922 SSPA0870 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141711.1 1003082 R 554290 CDS YP_002141712.1 197362075 complement(1003748..1004251) 1 NC_011147.1 similar to Salmonella typhi Ty2 ferritin-like protein; ferritin-like protein 1004251 554290000923 SSPA0871 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferritin-like protein YP_002141712.1 1003748 R 554290 CDS YP_002141713.1 197362076 1004801..1005358 1 NC_011147.1 similar to Salmonella typhimurium intracellular protease/amidase; intracellular protease/amidase 1005358 554290000924 SSPA0872 Salmonella enterica subsp. enterica serovar Paratyphi A str. intracellular protease/amidase YP_002141713.1 1004801 D 554290 CDS YP_002141714.1 197362077 1005470..1005652 1 NC_011147.1 similar to |434014|emb|CAA48911.1| ofaraH [Escherichia coli]; hypothetical protein 1005652 554290000925 SSPA0873 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141714.1 1005470 D 554290 CDS YP_002141715.1 197362078 1005875..1006678 1 NC_011147.1 biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature; trehalose-6-phosphate phosphatase 1006678 554290000926 SSPA0874 Salmonella enterica subsp. enterica serovar Paratyphi A str. trehalose-6-phosphate phosphatase YP_002141715.1 1005875 D 554290 CDS YP_002141716.1 197362079 1006653..1008074 1 NC_011147.1 similar to Salmonella typhi CT18 trehalose-6-phosphate synthase; trehalose-6-phosphate synthase 1008074 554290000927 SSPA0875 Salmonella enterica subsp. enterica serovar Paratyphi A str. trehalose-6-phosphate synthase YP_002141716.1 1006653 D 554290 CDS YP_002141717.1 197362080 complement(1008092..1008520) 1 NC_011147.1 'ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress'; universal stress protein UspC 1008520 554290000928 SSPA0876 Salmonella enterica subsp. enterica serovar Paratyphi A str. universal stress protein UspC YP_002141717.1 1008092 R 554290 CDS YP_002141718.1 197362081 complement(1008517..1008633) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1008633 554290000929 SSPA0877 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141718.1 1008517 R 554290 CDS YP_002141719.1 197362082 1009307..1009657 1 NC_011147.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 1009657 554290000930 SSPA0878 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator FlhD YP_002141719.1 1009307 D 554290 CDS YP_002141720.1 197362083 1009654..1010238 1 NC_011147.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1010238 554290000931 SSPA0879 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator FlhC YP_002141720.1 1009654 D 554290 CDS YP_002141721.1 197362084 1010421..1011251 1 NC_011147.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1011251 554290000932 SSPA0880 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar motor protein MotA YP_002141721.1 1010421 D 554290 CDS YP_002141722.1 197362085 1011248..1012177 1 NC_011147.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1012177 motB 554290000933 motB Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar motor protein MotB YP_002141722.1 1011248 D 554290 CDS YP_002141723.1 197362086 1012182..1014197 1 NC_011147.1 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 1014197 554290000934 SSPA0882 Salmonella enterica subsp. enterica serovar Paratyphi A str. chemotaxis protein CheA YP_002141723.1 1012182 D 554290 CDS YP_002141724.1 197362087 1014218..1014721 1 NC_011147.1 similar to Salmonella typhi CT18 purine binding chemotaxis protein; purine-binding chemotaxis protein 1014721 554290000935 SSPA0883 Salmonella enterica subsp. enterica serovar Paratyphi A str. purine-binding chemotaxis protein YP_002141724.1 1014218 D 554290 CDS YP_002141725.1 197362088 1016483..1017349 1 NC_011147.1 methylates the MCP; chemotaxis methyltransferase CheR 1017349 554290000937 SSPA0884 Salmonella enterica subsp. enterica serovar Paratyphi A str. chemotaxis methyltransferase CheR YP_002141725.1 1016483 D 554290 CDS YP_002141726.1 197362089 1017346..1018395 1 NC_011147.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1018395 554290000938 SSPA0885 Salmonella enterica subsp. enterica serovar Paratyphi A str. chemotaxis-specific methylesterase YP_002141726.1 1017346 D 554290 CDS YP_002141727.1 197362090 1018413..1018802 1 NC_011147.1 'chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble'; chemotaxis regulatory protein CheY 1018802 554290000939 SSPA0886 Salmonella enterica subsp. enterica serovar Paratyphi A str. chemotaxis regulatory protein CheY YP_002141727.1 1018413 D 554290 CDS YP_002141728.1 197362091 1018813..1019457 1 NC_011147.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 1019457 554290000940 SSPA0887 Salmonella enterica subsp. enterica serovar Paratyphi A str. chemotaxis regulator CheZ YP_002141728.1 1018813 D 554290 CDS YP_002141729.1 197362092 1019651..1020802 1 NC_011147.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1020802 flhB 554290000941 flhB Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FlhB YP_002141729.1 1019651 D 554290 CDS YP_002141730.1 197362093 1020795..1022873 1 NC_011147.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1022873 flhA 554290000942 flhA Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar biosynthesis protein FlhA YP_002141730.1 1020795 D 554290 CDS YP_002141731.1 197362094 1022873..1023265 1 NC_011147.1 similar to Salmonella typhi CT18 flagellar protein FlhE precursor; flagellar protein FlhE 1023265 554290000943 SSPA0890 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar protein FlhE YP_002141731.1 1022873 D 554290 CDS YP_002141732.1 197362095 complement(1023418..1023876) 1 NC_011147.1 similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase 1023876 554290000944 SSPA0891 Salmonella enterica subsp. enterica serovar Paratyphi A str. insertion sequence element IS200 transposase YP_002141732.1 1023418 R 554290 CDS YP_002141733.1 197362096 1024216..1025352 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1025352 554290000945 SSPA0892 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141733.1 1024216 D 554290 CDS YP_002141734.1 197362097 complement(1025406..1027277) 1 NC_011147.1 similar to |16122817|ref|NP_406130.1| penicillin-binding protein 2 [Yersinia pestis]; hypothetical protein 1027277 554290000946 SSPA0893 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141734.1 1025406 R 554290 CDS YP_002141735.1 197362098 complement(1027466..1029199) 1 NC_011147.1 'catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase'; arginyl-tRNA synthetase 1029199 argS 554290000947 argS Salmonella enterica subsp. enterica serovar Paratyphi A str. arginyl-tRNA synthetase YP_002141735.1 1027466 R 554290 CDS YP_002141736.1 197362099 1029436..1030005 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1030005 554290000948 SSPA0895 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141736.1 1029436 D 554290 CDS YP_002141737.1 197362100 1030025..1030771 1 NC_011147.1 similar to Salmonella typhi CT18 copper homeostasis protein; copper homeostasis protein CutC 1030771 554290000949 SSPA0896 Salmonella enterica subsp. enterica serovar Paratyphi A str. copper homeostasis protein CutC YP_002141737.1 1030025 D 554290 CDS YP_002141738.1 197362101 complement(1031006..1031977) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1031977 554290000950 SSPA0897 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141738.1 1031006 R 554290 CDS YP_002141739.1 197362102 complement(1031974..1032717) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1032717 554290000951 SSPA0898 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141739.1 1031974 R 554290 CDS YP_002141740.1 197362103 complement(1032758..1033153) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1033153 554290000952 SSPA0899 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141740.1 1032758 R 554290 CDS YP_002141741.1 197362104 complement(1033206..1034024) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1034024 554290000953 SSPA0900 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141741.1 1033206 R 554290 CDS YP_002141742.1 197362105 complement(1034021..1034587) 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hypothetical protein 1034587 554290000954 SSPA0901 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141742.1 1034021 R 554290 CDS YP_002141743.1 197362106 1034912..1036684 1 NC_011147.1 'catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes'; aspartyl-tRNA synthetase 1036684 aspS 554290000955 aspS Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartyl-tRNA synthetase YP_002141743.1 1034912 D 554290 CDS YP_002141744.1 197362107 1036787..1037239 1 NC_011147.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 1037239 ntpA 554290000956 ntpA Salmonella enterica subsp. enterica serovar Paratyphi A str. dATP pyrophosphohydrolase YP_002141744.1 1036787 D 554290 CDS YP_002141745.1 197362108 1037269..1038009 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1038009 554290000957 SSPA0904 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141745.1 1037269 D 554290 CDS YP_002141746.1 197362109 1038046..1038567 1 NC_011147.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; holliday junction resolvase 1038567 ruvC 554290000958 ruvC Salmonella enterica subsp. enterica serovar Paratyphi A str. holliday junction resolvase YP_002141746.1 1038046 D 554290 CDS YP_002141747.1 197362110 complement(1038569..1039168) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1039168 554290000959 SSPA0906 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141747.1 1038569 R 554290 CDS YP_002141748.1 197362111 1039396..1040070 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1040070 554290000960 SSPA0907 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141748.1 1039396 D 554290 CDS YP_002141749.1 197362112 1040430..1041041 1 NC_011147.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; holliday junction DNA helicase RuvA 1041041 ruvA 554290000961 ruvA Salmonella enterica subsp. enterica serovar Paratyphi A str. holliday junction DNA helicase RuvA YP_002141749.1 1040430 D 554290 CDS YP_002141750.1 197362113 1041050..1042060 1 NC_011147.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1042060 ruvB 554290000962 ruvB Salmonella enterica subsp. enterica serovar Paratyphi A str. Holliday junction DNA helicase RuvB YP_002141750.1 1041050 D 554290 CDS YP_002141751.1 197362114 complement(1042139..1042924) 1 NC_011147.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein 1042924 znuB 554290000963 znuB Salmonella enterica subsp. enterica serovar Paratyphi A str. high-affinity zinc transporter membrane protein YP_002141751.1 1042139 R 554290 CDS YP_002141752.1 197362115 complement(1042921..1043676) 1 NC_011147.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase 1043676 znuC 554290000964 znuC Salmonella enterica subsp. enterica serovar Paratyphi A str. high-affinity zinc transporter ATPase YP_002141752.1 1042921 R 554290 CDS YP_002141753.1 197362116 1043740..1044699 1 NC_011147.1 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 1044699 znuA 554290000965 znuA Salmonella enterica subsp. enterica serovar Paratyphi A str. high-affinity zinc transporter periplasmic protein YP_002141753.1 1043740 D 554290 CDS YP_002141754.1 197362117 1044715..1046034 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1046034 554290000966 SSPA0913 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141754.1 1044715 D 554290 CDS YP_002141755.1 197362118 1046151..1047122 1 NC_011147.1 'Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA'; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1047122 554290000967 SSPA0914 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_002141755.1 1046151 D 554290 CDS YP_002141756.1 197362119 complement(1047195..1048637) 1 NC_011147.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1048637 554290000968 SSPA0915 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate kinase YP_002141756.1 1047195 R 554290 CDS YP_002141757.1 197362120 complement(1048761..1049630) 1 NC_011147.1 'Represses the expression of the zwf, eda, glp and gap'; DNA-binding transcriptional regulator HexR 1049630 554290000969 SSPA0916 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator HexR YP_002141757.1 1048761 R 554290 CDS YP_002141758.2 449784928 1049972..1051447 1 NC_011147.1 similar to Salmonella typhi CT18 glucose 6-phosphate dehydrogenase; glucose 6-phosphate dehydrogenase 1051447 554290000970 SSPA0917 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose 6-phosphate dehydrogenase YP_002141758.2 1049972 D 554290 CDS YP_002141759.1 197362122 1051682..1053493 1 NC_011147.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1053493 554290000971 SSPA0918 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphogluconate dehydratase YP_002141759.1 1051682 D 554290 CDS YP_002141760.1 197362123 1053531..1054172 1 NC_011147.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 1054172 554290000972 SSPA0919 Salmonella enterica subsp. enterica serovar Paratyphi A str. keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_002141760.1 1053531 D 554290 CDS YP_002141761.1 197362124 complement(1054272..1055450) 1 NC_011147.1 'non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis'; phosphoribosylglycinamide formyltransferase 2 1055450 purT 554290000973 purT Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylglycinamide formyltransferase 2 YP_002141761.1 1054272 R 554290 CDS YP_002141762.1 197362125 1055939..1056292 1 NC_011147.1 secreted protein; unknown function; hypothetical protein 1056292 554290000975 SSPA0921 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141762.1 1055939 D 554290 CDS YP_002141763.1 197362126 1056386..1057045 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1057045 554290000976 SSPA0922 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141763.1 1056386 D 554290 CDS YP_002141764.1 197362127 1057259..1059310 1 NC_011147.1 PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; protease 2 1059310 554290000977 SSPA0923 Salmonella enterica subsp. enterica serovar Paratyphi A str. protease 2 YP_002141764.1 1057259 D 554290 CDS YP_002141765.1 197362128 complement(1059347..1060045) 1 NC_011147.1 3'-5' exonuclease activity on single or double-strand DNA; exodeoxyribonuclease X 1060045 554290000978 SSPA0924 Salmonella enterica subsp. enterica serovar Paratyphi A str. exodeoxyribonuclease X YP_002141765.1 1059347 R 554290 CDS YP_002141766.1 197362129 complement(1060069..1060725) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1060725 554290000979 SSPA0925 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141766.1 1060069 R 554290 CDS YP_002141767.1 197362130 complement(1060833..1061063) 1 NC_011147.1 'similar to Salmonella typhi CT18 DNA polymerase III, theta subunit'; DNA polymerase III subunit theta 1061063 554290000980 SSPA0926 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit theta YP_002141767.1 1060833 R 554290 CDS YP_002141768.1 197362131 1061201..1061575 1 NC_011147.1 similar to Salmonella typhi CT18 cation resistance protein; hypothetical protein 1061575 554290000981 SSPA0927 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141768.1 1061201 D 554290 CDS YP_002141769.1 197362132 1061576..1062451 1 NC_011147.1 similar to Salmonella typhi CT18 cation transporter; cation transporter 1062451 554290000982 SSPA0928 Salmonella enterica subsp. enterica serovar Paratyphi A str. cation transporter YP_002141769.1 1061576 D 554290 CDS YP_002141770.1 197362133 1062468..1062821 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1062821 554290000983 SSPA0929 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141770.1 1062468 D 554290 CDS YP_002141771.1 197362134 1062882..1062998 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1062998 554290000984 SSPA0930 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141771.1 1062882 D 554290 CDS YP_002141772.1 197362135 1064446..1065432 1 NC_011147.1 hypothetical protein 1065432 554290000986 SSPA0931 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141772.1 1064446 D 554290 CDS YP_002141773.1 197362136 complement(1066302..1067072) 1 NC_011147.1 similar to |16123493|ref|NP_406806.1| probable extracellular solute-binding protein [Yersinia pestis]; hypothetical protein 1067072 554290000988 SSPA0932 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141773.1 1066302 R 554290 CDS YP_002141774.1 197362137 complement(1067720..1068469) 1 NC_011147.1 similar to |18265551|gb|AAL67196.1| unknown [Salmonella enterica subsp. enterica serovar Gallinarum]; hypothetical protein 1068469 554290000989 SSPA0933 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141774.1 1067720 R 554290 CDS YP_002141775.1 197362138 1070246..1070641 1 NC_011147.1 hypothetical protein 1070641 554290000991 SSPA0935 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141775.1 1070246 D 554290 CDS YP_002141776.1 197362139 complement(1070617..1070769) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1070769 554290000992 SSPA0936 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141776.1 1070617 R 554290 CDS YP_002141777.1 197362140 complement(1070928..1072058) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1072058 554290000993 SSPA0937 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141777.1 1070928 R 554290 CDS YP_002141778.1 197362141 1072454..1074433 1 NC_011147.1 similar to Salmonella typhi Ty2 hydrolase; hydrolase 1074433 554290000994 SSPA0938 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002141778.1 1072454 D 554290 CDS YP_002141779.1 197362142 complement(1074451..1074642) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1074642 554290000995 SSPA0939 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141779.1 1074451 R 554290 CDS YP_002141780.1 197362143 complement(1074842..1075456) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1075456 554290000996 SSPA0940 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141780.1 1074842 R 554290 CDS YP_002141781.1 197362144 complement(1075466..1075588) 1 NC_011147.1 hypothetical protein 1075588 554290000997 SSPA0941 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141781.1 1075466 R 554290 CDS YP_002141782.1 197362145 complement(1075757..1076671) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1076671 554290000998 SSPA0942 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141782.1 1075757 R 554290 CDS YP_002141783.1 197362146 complement(1077960..1078328) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1078328 554290000999 SSPA0943 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141783.1 1077960 R 554290 CDS YP_002141784.1 197362147 complement(1079793..1079933) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1079933 554290001001 SSPA0944 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141784.1 1079793 R 554290 CDS YP_002141785.1 197362148 complement(1080099..1080368) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1080368 554290001002 SSPA0945 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141785.1 1080099 R 554290 CDS YP_002141786.1 197362149 1080739..1081158 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 1081158 554290001003 SSPA0946 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002141786.1 1080739 D 554290 CDS YP_002141787.1 197362150 complement(1081534..1082010) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1082010 554290001004 SSPA0947 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141787.1 1081534 R 554290 CDS YP_002141788.1 197362151 complement(1082326..1082733) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1082733 554290001005 SSPA0948 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141788.1 1082326 R 554290 CDS YP_002141789.1 197362152 1083416..1084138 1 NC_011147.1 similar to Salmonella typhimurium Type III-secreted protein effector: invasion-associated protein; type III-secreted protein effector: invasion-associated protein 1084138 554290001006 SSPA0949 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III-secreted protein effector: invasion-associated protein YP_002141789.1 1083416 D 554290 CDS YP_002141790.1 197362153 1084423..1084587 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1084587 554290001007 SSPA0950 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141790.1 1084423 D 554290 CDS YP_002141791.1 197362154 1084814..1085461 1 NC_011147.1 Plays a key role in signaling protein misfolding via the cpxR/cpxA transducing system; modulates the phosphorylated status of many phosphoproteins; serine/threonine protein phosphatase 1 1085461 pphA 554290001008 pphA Salmonella enterica subsp. enterica serovar Paratyphi A str. serine/threonine protein phosphatase 1 YP_002141791.1 1084814 D 554290 CDS YP_002141792.1 197362155 complement(1085480..1085671) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1085671 554290001009 SSPA0952 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141792.1 1085480 R 554290 CDS YP_002141793.1 197362156 complement(1085782..1086021) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1086021 554290001010 SSPA0953 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141793.1 1085782 R 554290 CDS YP_002141794.1 197362157 complement(1086135..1087574) 1 NC_011147.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 1087574 yebU 554290001011 yebU Salmonella enterica subsp. enterica serovar Paratyphi A str. rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_002141794.1 1086135 R 554290 CDS YP_002141795.1 197362158 complement(1087652..1090291) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1090291 554290001012 SSPA0955 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141795.1 1087652 R 554290 CDS YP_002141796.1 197362159 complement(1090254..1091537) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1091537 554290001013 SSPA0956 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141796.1 1090254 R 554290 CDS YP_002141797.1 197362160 1091579..1092163 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1092163 554290001014 SSPA0957 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141797.1 1091579 D 554290 CDS YP_002141798.1 197362161 1092261..1092947 1 NC_011147.1 affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector 1092947 proQ 554290001015 proQ Salmonella enterica subsp. enterica serovar Paratyphi A str. solute/DNA competence effector YP_002141798.1 1092261 D 554290 CDS YP_002141799.1 197362162 1092967..1095015 1 NC_011147.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 1095015 554290001016 SSPA0958 Salmonella enterica subsp. enterica serovar Paratyphi A str. carboxy-terminal protease YP_002141799.1 1092967 D 554290 CDS YP_002141800.1 197362163 1095209..1096090 1 NC_011147.1 metalloprotease; heat shock protein HtpX 1096090 554290001017 SSPA0959 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat shock protein HtpX YP_002141800.1 1095209 D 554290 CDS YP_002141801.1 197362164 complement(1096138..1097511) 1 NC_011147.1 similar to Salmonella typhimurium transport protein; transporter 1097511 554290001018 SSPA0960 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002141801.1 1096138 R 554290 CDS YP_002141802.1 197362165 1097687..1098478 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator KdgR; transcriptional regulator KdgR 1098478 554290001019 SSPA0961 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator KdgR YP_002141802.1 1097687 D 554290 CDS YP_002141803.1 197362166 complement(1098690..1098929) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1098929 554290001020 SSPA0962 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141803.1 1098690 R 554290 CDS YP_002141804.1 197362167 1099087..1099230 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1099230 554290001021 SSPA0963 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141804.1 1099087 D 554290 CDS YP_002141805.1 197362168 1099301..1099588 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1099588 554290001022 SSPA0964 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141805.1 1099301 D 554290 CDS YP_002141806.1 197362169 1100237..1100380 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1100380 554290001023 SSPA0965 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141806.1 1100237 D 554290 CDS YP_002141807.1 197362170 1100393..1100602 1 NC_011147.1 similar to Salmonella typhi CT18 cold shock-like protein CspC; cold shock-like protein CspC 1100602 554290001024 SSPA0966 Salmonella enterica subsp. enterica serovar Paratyphi A str. cold shock-like protein CspC YP_002141807.1 1100393 D 554290 CDS YP_002141808.1 197362171 1100822..1102567 1 NC_011147.1 similar to Salmonella typhi Ty2 penicillin-binding protein; penicillin-binding protein 1102567 554290001025 SSPA0967 Salmonella enterica subsp. enterica serovar Paratyphi A str. penicillin-binding protein YP_002141808.1 1100822 D 554290 CDS YP_002141809.1 197362172 1102633..1103442 1 NC_011147.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A 1103442 rrmA 554290001026 rrmA Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA methyltransferase A YP_002141809.1 1102633 D 554290 CDS YP_002141810.1 197362173 complement(1103439..1104059) 1 NC_011147.1 membrane protein YebN; hypothetical protein 1104059 554290001027 SSPA0969 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141810.1 1103439 R 554290 CDS YP_002141811.1 197362174 complement(1104415..1104873) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1104873 554290001028 SSPA0970 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141811.1 1104415 R 554290 CDS YP_002141812.1 197362175 complement(1104931..1105782) 1 NC_011147.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 1105782 554290001029 SSPA0971 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system mannose-specific transporter subunit IID YP_002141812.1 1104931 R 554290 CDS YP_002141813.1 197362176 complement(1105795..1106595) 1 NC_011147.1 'similar to Salmonella typhi CT18 phosphotransferase enzyme II, C component'; phosphotransferase enzyme II subunit C 1106595 554290001030 SSPA0972 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransferase enzyme II subunit C YP_002141813.1 1105795 R 554290 CDS YP_002141814.1 197362177 complement(1106648..1107616) 1 NC_011147.1 'similar to Salmonella typhi CT18 PTS system,mannose-specific IIAB component'; PTS system mannose-specific transporter subunit IIAB 1107616 554290001031 SSPA0973 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system mannose-specific transporter subunit IIAB YP_002141814.1 1106648 R 554290 CDS YP_002141815.1 197362178 1107769..1108101 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1108101 554290001032 SSPA0974 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141815.1 1107769 D 554290 CDS YP_002141816.1 197362179 1108089..1109648 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1109648 554290001033 SSPA0975 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141816.1 1108089 D 554290 CDS YP_002141817.2 449784929 complement(1109670..1111271) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1111271 554290001034 SSPA0976 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141817.2 1109670 R 554290 CDS YP_002141818.1 197362181 complement(1111409..1112755) 1 NC_011147.1 similar to Salmonella typhi CT18 L-serine deaminase 1; L-serine deaminase 1 1112755 554290001035 SSPA0977 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-serine deaminase 1 YP_002141818.1 1111409 R 554290 CDS YP_002141819.1 197362182 complement(1113037..1113615) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1113615 554290001036 SSPA0978 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141819.1 1113037 R 554290 CDS YP_002141820.1 197362183 complement(1113619..1114983) 1 NC_011147.1 similar to Salmonella typhi CT18 para-aminobenzoate synthase component I; para-aminobenzoate synthase component I 1114983 554290001037 SSPA0979 Salmonella enterica subsp. enterica serovar Paratyphi A str. para-aminobenzoate synthase component I YP_002141820.1 1113619 R 554290 CDS YP_002141821.1 197362184 1115064..1115243 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1115243 554290001038 SSPA0980 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141821.1 1115064 D 554290 CDS YP_002141822.1 197362185 complement(1115249..1115593) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1115593 554290001039 SSPA0981 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141822.1 1115249 R 554290 CDS YP_002141823.1 197362186 1115725..1117635 1 NC_011147.1 similar to Salmonella typhi CT18 ATP-dependent helicase; ATP-dependent helicase 1117635 554290001040 SSPA0982 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent helicase YP_002141823.1 1115725 D 554290 CDS YP_002141824.1 197362187 1117693..1118388 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1118388 554290001041 SSPA0983 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141824.1 1117693 D 554290 CDS YP_002141825.1 197362188 1118460..1119041 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1119041 554290001042 SSPA0984 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141825.1 1118460 D 554290 CDS YP_002141826.1 197362189 1119246..1120931 1 NC_011147.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1120931 554290001043 SSPA0985 Salmonella enterica subsp. enterica serovar Paratyphi A str. long-chain-fatty-acid--CoA ligase YP_002141826.1 1119246 D 554290 CDS YP_002141827.1 197362190 1121016..1122131 1 NC_011147.1 similar to Salmonella typhi CT18 ribonuclease D; ribonuclease D 1122131 554290001044 SSPA0986 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease D YP_002141827.1 1121016 D 554290 CDS YP_002141828.1 197362191 complement(1122253..1122519) 1 NC_011147.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1122519 minE 554290001045 minE Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division topological specificity factor MinE YP_002141828.1 1122253 R 554290 CDS YP_002141829.1 197362192 complement(1122523..1123335) 1 NC_011147.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 1123335 554290001046 SSPA0988 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division inhibitor MinD YP_002141829.1 1122523 R 554290 CDS YP_002141830.1 197362193 complement(1123359..1124066) 1 NC_011147.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 1124066 minC 554290001047 minC Salmonella enterica subsp. enterica serovar Paratyphi A str. septum formation inhibitor YP_002141830.1 1123359 R 554290 CDS YP_002141831.1 197362194 1124153..1124485 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1124485 554290001048 SSPA0990 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141831.1 1124153 D 554290 CDS YP_002141832.1 197362195 1124535..1125194 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hypothetical protein 1125194 554290001049 SSPA0991 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141832.1 1124535 D 554290 CDS YP_002141833.1 197362196 1125287..1125733 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1125733 554290001050 SSPA0992 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141833.1 1125287 D 554290 CDS YP_002141834.1 197362197 1126415..1126588 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1126588 554290001051 SSPA0993 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141834.1 1126415 D 554290 CDS YP_002141835.1 197362198 complement(1126660..1127001) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1127001 554290001052 SSPA0994 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141835.1 1126660 R 554290 CDS YP_002141836.1 197362199 complement(1127110..1127640) 1 NC_011147.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 1127640 554290001053 SSPA0995 Salmonella enterica subsp. enterica serovar Paratyphi A str. disulfide bond formation protein B YP_002141836.1 1127110 R 554290 CDS YP_002141837.1 197362200 complement(1127782..1129326) 1 NC_011147.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 1129326 nhaB 554290001054 nhaB Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium/proton antiporter YP_002141837.1 1127782 R 554290 CDS YP_002141838.1 197362201 1129546..1130265 1 NC_011147.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 1130265 554290001055 SSPA0997 Salmonella enterica subsp. enterica serovar Paratyphi A str. fatty acid metabolism regulator YP_002141838.1 1129546 D 554290 CDS YP_002141839.1 197362202 complement(1130312..1131844) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; SpoVR family protein 1131844 554290001056 SSPA0998 Salmonella enterica subsp. enterica serovar Paratyphi A str. SpoVR family protein YP_002141839.1 1130312 R 554290 CDS YP_002141840.1 197362203 1132167..1133465 1 NC_011147.1 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 1133465 554290001057 SSPA0999 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-amino acid dehydrogenase small subunit YP_002141840.1 1132167 D 554290 CDS YP_002141841.1 197362204 1133479..1134549 1 NC_011147.1 'catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA'; alanine racemase 1134549 dadX 554290001058 dadX Salmonella enterica subsp. enterica serovar Paratyphi A str. alanine racemase YP_002141841.1 1133479 D 554290 CDS YP_002141842.1 197362205 complement(1134612..1136345) 1 NC_011147.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 1136345 554290001059 SSPA1001 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium/proton antiporter YP_002141842.1 1134612 R 554290 CDS YP_002141843.1 197362206 complement(1136442..1137356) 1 NC_011147.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A 1137356 ldcA 554290001060 ldcA Salmonella enterica subsp. enterica serovar Paratyphi A str. L,D-carboxypeptidase A YP_002141843.1 1136442 R 554290 CDS YP_002141844.1 197362207 1137527..1138138 1 NC_011147.1 similar to Salmonella typhi Ty2 membrane-bound lytic murein transglycosylase E; membrane-bound lytic murein transglycosylase E 1138138 554290001061 SSPA1003 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane-bound lytic murein transglycosylase E YP_002141844.1 1137527 D 554290 CDS YP_002141845.1 197362208 1139054..1139308 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1139308 554290001063 SSPA1004 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141845.1 1139054 D 554290 CDS YP_002141846.1 197362209 complement(1139371..1141083) 1 NC_011147.1 periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell; trehalase 1141083 treA 554290001064 treA Salmonella enterica subsp. enterica serovar Paratyphi A str. trehalase YP_002141846.1 1139371 R 554290 CDS YP_002141847.1 197362210 complement(1141297..1142622) 1 NC_011147.1 glutamate dehydrogenase 1142622 554290001065 SSPA1006 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate dehydrogenase YP_002141847.1 1141297 R 554290 CDS YP_002141848.1 197362211 complement(1142966..1143055) 1 NC_011147.1 expressed during stationary phase; hypothetical protein 1143055 554290001066 SSPA1007 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141848.1 1142966 R 554290 CDS YP_002141849.1 197362212 complement(1143068..1144204) 1 NC_011147.1 similar to Salmonella typhi CT18 probable cytochrome oxidase subunit II; cytochrome oxidase subunit II 1144204 554290001067 SSPA1008 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome oxidase subunit II YP_002141849.1 1143068 R 554290 CDS YP_002141850.1 197362213 complement(1144216..1145760) 1 NC_011147.1 'similar to Escherichia coli K12 probable third cytochrome oxidase, subunit I'; third cytochrome oxidase, subunit I 1145760 554290001068 SSPA1009 Salmonella enterica subsp. enterica serovar Paratyphi A str. third cytochrome oxidase, subunit I YP_002141850.1 1144216 R 554290 CDS YP_002141851.1 197362214 complement(1145835..1146683) 1 NC_011147.1 similar to Salmonella typhi CT18 hydrogenase-1 operon protein HyaF; hydrogenase-1 operon protein HyaF 1146683 554290001069 SSPA1010 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase-1 operon protein HyaF YP_002141851.1 1145835 R 554290 CDS YP_002141852.1 197362215 complement(1146680..1147084) 1 NC_011147.1 involved in processing hydrogenase proteins HyaA and HyaB; hydrogenase-1 operon protein HyaE 1147084 554290001070 SSPA1011 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase-1 operon protein HyaE YP_002141852.1 1146680 R 554290 CDS YP_002141853.1 197362216 complement(1147074..1147670) 1 NC_011147.1 HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1); hydrogenase 1 maturation protease 1147670 554290001071 SSPA1012 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 1 maturation protease YP_002141853.1 1147074 R 554290 CDS YP_002141854.1 197362217 complement(1147667..1148398) 1 NC_011147.1 similar to Salmonella typhi CT18 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; hydrogenase 1 b-type cytochrome subunit 1148398 554290001072 SSPA1013 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 1 b-type cytochrome subunit YP_002141854.1 1147667 R 554290 CDS YP_002141855.1 197362218 complement(1148417..1150210) 1 NC_011147.1 involved in hydrogen cycling during fermentative growth; hydrogenase 1 large subunit 1150210 554290001073 SSPA1014 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 1 large subunit YP_002141855.1 1148417 R 554290 CDS YP_002141856.1 197362219 1151809..1153074 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1153074 554290001075 SSPA1015 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141856.1 1151809 D 554290 CDS YP_002141857.1 197362220 complement(1153233..1154324) 1 NC_011147.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1154324 554290001076 SSPA1016 Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP-dependent nucleic acid-binding protein EngD YP_002141857.1 1153233 R 554290 CDS YP_002141858.1 197362221 complement(1154441..1155049) 1 NC_011147.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1155049 554290001077 SSPA1017 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-tRNA hydrolase YP_002141858.1 1154441 R 554290 CDS YP_002141859.1 197362222 1155301..1155579 1 NC_011147.1 'YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function'; hypothetical protein 1155579 554290001078 SSPA1018 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141859.1 1155301 D 554290 CDS YP_002141860.1 197362223 complement(1155624..1157309) 1 NC_011147.1 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM 1157309 554290001079 SSPA1019 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate transporter YchM YP_002141860.1 1155624 R 554290 CDS YP_002141861.1 197362224 complement(1157434..1158381) 1 NC_011147.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1158381 554290001080 SSPA1020 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribose-phosphate pyrophosphokinase YP_002141861.1 1157434 R 554290 CDS YP_002141862.1 197362225 complement(1158647..1159495) 1 NC_011147.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1159495 ipk 554290001081 ipk Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002141862.1 1158647 R 554290 CDS YP_002141863.1 197362226 complement(1159495..1160118) 1 NC_011147.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 1160118 lolB 554290001082 lolB Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein LolB YP_002141863.1 1159495 R 554290 CDS YP_002141864.1 197362227 1160432..1161688 1 NC_011147.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1161688 hemA 554290001083 hemA Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamyl-tRNA reductase YP_002141864.1 1160432 D 554290 CDS YP_002141865.1 197362228 1161729..1162811 1 NC_011147.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1162811 prfA 554290001084 prfA Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide chain release factor 1 YP_002141865.1 1161729 D 554290 CDS YP_002141866.1 197362229 1162811..1163644 1 NC_011147.1 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1163644 554290001085 SSPA1025 Salmonella enterica subsp. enterica serovar Paratyphi A str. N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_002141866.1 1162811 D 554290 CDS YP_002141867.1 197362230 1163641..1164030 1 NC_011147.1 similar to Salmonella typhi CT18 regulator; transcriptional regulator 1164030 554290001086 SSPA1026 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141867.1 1163641 D 554290 CDS YP_002141868.1 197362231 1164034..1164843 1 NC_011147.1 similar to Salmonella typhi CT18 regulator; transcriptional regulator 1164843 554290001087 SSPA1027 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141868.1 1164034 D 554290 CDS YP_002141869.1 197362232 1164881..1165735 1 NC_011147.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1165735 554290001088 SSPA1028 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-dehydro-3-deoxyphosphooctonate aldolase YP_002141869.1 1164881 D 554290 CDS YP_002141870.1 197362233 complement(1165789..1166889) 1 NC_011147.1 similar to Salmonella typhi CT18 calcium/proton antiporter; calcium/sodium:proton antiporter 1166889 554290001089 SSPA1029 Salmonella enterica subsp. enterica serovar Paratyphi A str. calcium/sodium:proton antiporter YP_002141870.1 1165789 R 554290 CDS YP_002141871.1 197362234 complement(1167466..1167819) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1167819 554290001091 SSPA1030 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141871.1 1167466 R 554290 CDS YP_002141872.1 197362235 1167996..1169420 1 NC_011147.1 similar to Salmonella typhi CT18 invasin; hypothetical protein 1169420 554290001092 SSPA1031 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141872.1 1167996 D 554290 CDS YP_002141873.1 197362236 complement(1169421..1170071) 1 NC_011147.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 1170071 554290001093 SSPA1032 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator NarL YP_002141873.1 1169421 R 554290 CDS YP_002141874.1 197362237 complement(1170064..1171860) 1 NC_011147.1 similar to Salmonella typhi CT18 nitrate/nitrite sensor protein NarX; nitrate/nitrite sensor protein NarX 1171860 554290001094 SSPA1033 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrate/nitrite sensor protein NarX YP_002141874.1 1170064 R 554290 CDS YP_002141875.1 197362238 1172201..1173598 1 NC_011147.1 similar to Salmonella typhi CT18 nitrite extrusion protein (nitrite facilitator); nitrite extrusion protein 1173598 554290001095 SSPA1034 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrite extrusion protein YP_002141875.1 1172201 D 554290 CDS YP_002141876.1 197362239 1173987..1177730 1 NC_011147.1 similar to Salmonella typhi CT18 respiratory nitrate reductase 1 alpha chain; respiratory nitrate reductase 1 subunit alpha 1177730 554290001096 SSPA1035 Salmonella enterica subsp. enterica serovar Paratyphi A str. respiratory nitrate reductase 1 subunit alpha YP_002141876.1 1173987 D 554290 CDS YP_002141877.1 197362240 1177727..1179262 1 NC_011147.1 similar to Salmonella typhi CT18 respiratory nitrate reductase 1 beta chain; respiratory nitrate reductase 1 subunit beta 1179262 554290001097 SSPA1036 Salmonella enterica subsp. enterica serovar Paratyphi A str. respiratory nitrate reductase 1 subunit beta YP_002141877.1 1177727 D 554290 CDS YP_002141878.1 197362241 1179259..1179969 1 NC_011147.1 similar to Salmonella typhi CT18 respiratory nitrate reductase 1 delta chain; respiratory nitrate reductase 1 subunit delta 1179969 554290001098 SSPA1037 Salmonella enterica subsp. enterica serovar Paratyphi A str. respiratory nitrate reductase 1 subunit delta YP_002141878.1 1179259 D 554290 CDS YP_002141879.1 197362242 1179969..1180646 1 NC_011147.1 similar to Salmonella typhi CT18 respiratory nitrate reductase 1 gamma chain; respiratory nitrate reductase 1 subunit gamma 1180646 554290001099 SSPA1038 Salmonella enterica subsp. enterica serovar Paratyphi A str. respiratory nitrate reductase 1 subunit gamma YP_002141879.1 1179969 D 554290 CDS YP_002141880.1 197362243 1180942..1182417 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1182417 554290001100 SSPA1039 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141880.1 1180942 D 554290 CDS YP_002141881.1 197362244 1183374..1183703 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1183703 554290001107 SSPA1040 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141881.1 1183374 D 554290 CDS YP_002141882.1 197362245 complement(1183764..1184606) 1 NC_011147.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1184606 purU 554290001108 purU Salmonella enterica subsp. enterica serovar Paratyphi A str. formyltetrahydrofolate deformylase YP_002141882.1 1183764 R 554290 CDS YP_002141883.1 197362246 complement(1184657..1185115) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1185115 554290001109 SSPA1042 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141883.1 1184657 R 554290 CDS YP_002141884.1 197362247 1185226..1186131 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1186131 554290001110 SSPA1043 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141884.1 1185226 D 554290 CDS YP_002141885.1 197362248 1186222..1187235 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; response regulator of RpoS 1187235 554290001111 SSPA1044 Salmonella enterica subsp. enterica serovar Paratyphi A str. response regulator of RpoS YP_002141885.1 1186222 D 554290 CDS YP_002141886.1 197362249 1187438..1188346 1 NC_011147.1 'together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose'; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1188346 554290001112 SSPA1045 Salmonella enterica subsp. enterica serovar Paratyphi A str. UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_002141886.1 1187438 D 554290 CDS YP_002141887.1 197362250 complement(1188477..1188890) 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein (histone-like protein Hlp-II); global DNA-binding transcriptional dual regulator H-NS 1188890 554290001113 SSPA1046 Salmonella enterica subsp. enterica serovar Paratyphi A str. global DNA-binding transcriptional dual regulator H-NS YP_002141887.1 1188477 R 554290 CDS YP_002141888.1 197362251 1189553..1190170 1 NC_011147.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1190170 554290001114 SSPA1047 Salmonella enterica subsp. enterica serovar Paratyphi A str. thymidine kinase YP_002141888.1 1189553 D 554290 CDS YP_002141889.1 197362252 complement(1190367..1193045) 1 NC_011147.1 similar to Salmonella typhi Ty2 alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1193045 554290001115 SSPA1048 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_002141889.1 1190367 R 554290 CDS YP_002141890.1 197362253 1193522..1194169 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1194169 554290001116 SSPA1049 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141890.1 1193522 D 554290 CDS YP_002141891.1 197362254 1194829..1196577 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic oligopeptide-binding protein precursor; periplasmic oligopeptide-binding protein 1196577 554290001117 SSPA1050 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic oligopeptide-binding protein YP_002141891.1 1194829 D 554290 CDS YP_002141892.1 197362255 1196699..1197619 1 NC_011147.1 similar to Salmonella typhi CT18 oligopeptide transport system permease protein OppB; oligopeptide transporter permease 1197619 oppB 554290001118 oppB Salmonella enterica subsp. enterica serovar Paratyphi A str. oligopeptide transporter permease YP_002141892.1 1196699 D 554290 CDS YP_002141893.1 197362256 1197634..1198542 1 NC_011147.1 'similar to Salmonella typhimurium ABC superfamily (membrane), oligopeptide transport protein'; oligopeptide ABC transporter membrane protein 1198542 554290001119 SSPA1052 Salmonella enterica subsp. enterica serovar Paratyphi A str. oligopeptide ABC transporter membrane protein YP_002141893.1 1197634 D 554290 CDS YP_002141894.1 197362257 1198554..1199561 1 NC_011147.1 similar to Salmonella typhi CT18 oligopeptide transport ATP-binding protein OppD; oligopeptide transporter ATP-binding protein 1199561 oppD 554290001120 oppD Salmonella enterica subsp. enterica serovar Paratyphi A str. oligopeptide transporter ATP-binding protein YP_002141894.1 1198554 D 554290 CDS YP_002141895.1 197362258 1199558..1200562 1 NC_011147.1 similar to Salmonella typhi CT18 oligopeptide transport ATP-binding protein OppF; oligopeptide transport ATP-binding protein OppF 1200562 554290001121 SSPA1054 Salmonella enterica subsp. enterica serovar Paratyphi A str. oligopeptide transport ATP-binding protein OppF YP_002141895.1 1199558 D 554290 CDS YP_002141896.1 197362259 1200664..1201446 1 NC_011147.1 similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein 1201446 554290001122 SSPA1055 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002141896.1 1200664 D 554290 CDS YP_002141897.1 197362260 complement(1201494..1201823) 1 NC_011147.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 1201823 554290001123 SSPA1056 Salmonella enterica subsp. enterica serovar Paratyphi A str. dsDNA-mimic protein YP_002141897.1 1201494 R 554290 CDS YP_002141898.1 197362261 complement(1201857..1203317) 1 NC_011147.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 1203317 cls 554290001124 cls Salmonella enterica subsp. enterica serovar Paratyphi A str. cardiolipin synthetase YP_002141898.1 1201857 R 554290 CDS YP_002141899.1 197362262 complement(1203677..1203973) 1 NC_011147.1 'unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity'; YciI-like protein 1203973 554290001125 SSPA1058 Salmonella enterica subsp. enterica serovar Paratyphi A str. YciI-like protein YP_002141899.1 1203677 R 554290 CDS YP_002141900.1 197362263 1204197..1204925 1 NC_011147.1 'membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins'; transporter 1204925 554290001126 SSPA1059 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002141900.1 1204197 D 554290 CDS YP_002141901.1 197362264 complement(1204984..1205385) 1 NC_011147.1 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 1205385 554290001127 SSPA1060 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl-CoA thioester hydrolase YP_002141901.1 1204984 R 554290 CDS YP_002141902.1 197362265 complement(1205546..1206085) 1 NC_011147.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 1206085 554290001128 SSPA1061 Salmonella enterica subsp. enterica serovar Paratyphi A str. intracellular septation protein A YP_002141902.1 1205546 R 554290 CDS YP_002141903.1 197362266 complement(1206142..1206885) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1206885 554290001129 SSPA1062 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141903.1 1206142 R 554290 CDS YP_002141904.1 197362267 complement(1206911..1207315) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1207315 554290001130 SSPA1063 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141904.1 1206911 R 554290 CDS YP_002141905.1 197362268 1207653..1208291 1 NC_011147.1 receptor for colicin S4; outer membrane protein W 1208291 554290001131 SSPA1064 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein W YP_002141905.1 1207653 D 554290 CDS YP_002141906.1 197362269 complement(1208373..1209251) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1209251 554290001132 SSPA1065 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141906.1 1208373 R 554290 CDS YP_002141907.1 197362270 complement(1209271..1209777) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1209777 554290001133 SSPA1066 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141907.1 1209271 R 554290 CDS YP_002141908.1 197362271 complement(1209851..1210354) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1210354 554290001134 SSPA1067 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141908.1 1209851 R 554290 CDS YP_002141909.1 197362272 complement(1210444..1210626) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1210626 554290001135 SSPA1068 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141909.1 1210444 R 554290 CDS YP_002141910.1 197362273 complement(1211106..1211912) 1 NC_011147.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1211912 trpA 554290001136 trpA Salmonella enterica subsp. enterica serovar Paratyphi A str. tryptophan synthase subunit alpha YP_002141910.1 1211106 R 554290 CDS YP_002141911.1 197362274 complement(1211912..1213105) 1 NC_011147.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1213105 554290001137 SSPA1070 Salmonella enterica subsp. enterica serovar Paratyphi A str. tryptophan synthase subunit beta YP_002141911.1 1211912 R 554290 CDS YP_002141912.1 197362275 complement(1213115..1214473) 1 NC_011147.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1214473 554290001138 SSPA1071 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_002141912.1 1213115 R 554290 CDS YP_002141913.1 197362276 complement(1216072..1217634) 1 NC_011147.1 'with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine'; anthranilate synthase component I 1217634 554290001140 SSPA1073 Salmonella enterica subsp. enterica serovar Paratyphi A str. anthranilate synthase component I YP_002141913.1 1216072 R 554290 CDS YP_002141914.1 197362277 1217895..1218776 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1218776 554290001141 SSPA1074 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141914.1 1217895 D 554290 CDS YP_002141915.1 197362278 1218784..1219404 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1219404 554290001142 SSPA1075 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141915.1 1218784 D 554290 CDS YP_002141916.1 197362279 1219505..1220380 1 NC_011147.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 1220380 554290001143 SSPA1076 Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA pseudouridylate synthase B YP_002141916.1 1219505 D 554290 CDS YP_002141917.1 197362280 complement(1220467..1221057) 1 NC_011147.1 'catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide'; cob(I)yrinic acid a,c-diamide adenosyltransferase 1221057 554290001144 SSPA1077 Salmonella enterica subsp. enterica serovar Paratyphi A str. cob(I)yrinic acid a,c-diamide adenosyltransferase YP_002141917.1 1220467 R 554290 CDS YP_002141918.1 197362281 complement(1221054..1221815) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical oxidoreductase; short chain dehydrogenase 1221815 554290001145 SSPA1078 Salmonella enterica subsp. enterica serovar Paratyphi A str. short chain dehydrogenase YP_002141918.1 1221054 R 554290 CDS YP_002141919.1 197362282 1222053..1223099 1 NC_011147.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 1223099 554290001146 SSPA1079 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic protease YP_002141919.1 1222053 D 554290 CDS YP_002141920.1 197362283 complement(1223141..1223392) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1223392 554290001147 SSPA1080 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141920.1 1223141 R 554290 CDS YP_002141921.1 197362284 1223795..1226392 1 NC_011147.1 'catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity'; DNA topoisomerase I 1226392 554290001148 SSPA1081 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA topoisomerase I YP_002141921.1 1223795 D 554290 CDS YP_002141922.1 197362285 1226803..1227777 1 NC_011147.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 1227777 cysB 554290001149 cysB Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator CysB YP_002141922.1 1226803 D 554290 CDS YP_002141923.1 197362286 1228754..1231429 1 NC_011147.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1231429 554290001150 SSPA1083 Salmonella enterica subsp. enterica serovar Paratyphi A str. aconitate hydratase YP_002141923.1 1228754 D 554290 CDS YP_002141924.1 197362287 complement(1231485..1232075) 1 NC_011147.1 'catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate'; GTP cyclohydrolase II 1232075 ribA 554290001151 ribA Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP cyclohydrolase II YP_002141924.1 1231485 R 554290 CDS YP_002141925.1 197362288 1232271..1233035 1 NC_011147.1 similar to Salmonella typhi CT18 phosphatidylglycerophosphatase B; phosphatidylglycerophosphatase B 1233035 554290001152 SSPA1085 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatidylglycerophosphatase B YP_002141925.1 1232271 D 554290 CDS YP_002141926.1 197362289 1233185..1233493 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1233493 554290001153 SSPA1086 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141926.1 1233185 D 554290 CDS YP_002141927.1 197362290 1233554..1234669 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1234669 554290001154 SSPA1087 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141927.1 1233554 D 554290 CDS YP_002141928.1 197362291 1234860..1235597 1 NC_011147.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1235597 554290001155 SSPA1088 Salmonella enterica subsp. enterica serovar Paratyphi A str. orotidine 5'-phosphate decarboxylase YP_002141928.1 1234860 D 554290 CDS YP_002141929.1 197362292 1235597..1235923 1 NC_011147.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 1235923 554290001156 SSPA1089 Salmonella enterica subsp. enterica serovar Paratyphi A str. translation initiation factor Sui1 YP_002141929.1 1235597 D 554290 CDS YP_002141930.1 197362293 complement(1236520..1237272) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1237272 554290001157 SSPA1090 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002141930.1 1236520 R 554290 CDS YP_002141931.1 197362294 complement(1237359..1237547) 1 NC_011147.1 hypothetical protein 1237547 554290001158 SSPA1091 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141931.1 1237359 R 554290 CDS YP_002141932.1 197362295 complement(1237660..1239642) 1 NC_011147.1 c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; RNase II stability modulator 1239642 554290001159 SSPA1092 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNase II stability modulator YP_002141932.1 1237660 R 554290 CDS YP_002141933.1 197362296 complement(1239904..1241838) 1 NC_011147.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 1241838 554290001160 SSPA1093 Salmonella enterica subsp. enterica serovar Paratyphi A str. exoribonuclease II YP_002141933.1 1239904 R 554290 CDS YP_002141934.1 197362297 complement(1241927..1243060) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1243060 554290001161 SSPA1094 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141934.1 1241927 R 554290 CDS YP_002141935.1 197362298 complement(1243260..1244048) 1 NC_011147.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1244048 554290001162 SSPA1095 Salmonella enterica subsp. enterica serovar Paratyphi A str. enoyl-ACP reductase YP_002141935.1 1243260 R 554290 CDS YP_002141936.1 197362299 1246502..1247209 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1247209 554290001164 SSPA1096 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141936.1 1246502 D 554290 CDS YP_002141937.1 197362300 complement(1247225..1248031) 1 NC_011147.1 similar to Salmonella typhi CT18 peptide transport system ATP-binding protein SapF; peptide transport system ATP-binding protein SapF 1248031 554290001165 SSPA1097 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide transport system ATP-binding protein SapF YP_002141937.1 1247225 R 554290 CDS YP_002141938.1 197362301 complement(1248033..1249025) 1 NC_011147.1 similar to Salmonella typhi CT18 peptide transport system ATP-binding protein SapD; peptide transport system ATP-binding protein SapD 1249025 554290001166 SSPA1098 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide transport system ATP-binding protein SapD YP_002141938.1 1248033 R 554290 CDS YP_002141939.1 197362302 complement(1249025..1249915) 1 NC_011147.1 similar to Salmonella typhi CT18 peptide transport system permease protein SapC; peptide transport system permease SapC 1249915 554290001167 SSPA1099 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide transport system permease SapC YP_002141939.1 1249025 R 554290 CDS YP_002141940.1 197362303 1250038..1250439 1 NC_011147.1 integrase 1250439 554290001168 SSPA1100 Salmonella enterica subsp. enterica serovar Paratyphi A str. integrase YP_002141940.1 1250038 D 554290 CDS YP_002141941.1 197362304 complement(1250739..1251623) 1 NC_011147.1 hypothetical protein 1251623 554290001170 SSPA1101 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141941.1 1250739 R 554290 CDS YP_002141942.1 197362305 1251933..1252346 1 NC_011147.1 similar to |31044260|ref|NP_851974.1| hypothetical protein phi4795p35 [Phage phi 4795]; hypothetical protein 1252346 554290001171 SSPA1102 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141942.1 1251933 D 554290 CDS YP_002141943.1 197362306 1253003..1253362 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical periplasmic protein; hypothetical protein 1253362 554290001173 SSPA1104 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141943.1 1253003 D 554290 CDS YP_002141944.1 197362307 1254157..1254294 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1254294 554290001176 SSPA1105 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141944.1 1254157 D 554290 CDS YP_002141945.2 449784930 complement(1254326..1255291) 1 NC_011147.1 similar to Salmonella typhi CT18 peptide transport system permease protein SapB; peptide transport system permease SapB 1255291 554290001177 SSPA1106 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide transport system permease SapB YP_002141945.2 1254326 R 554290 CDS YP_002141946.1 197362309 complement(1255288..1256937) 1 NC_011147.1 similar to Salmonella typhi CT18 peptide transport periplasmic protein SapA precursor; peptide transport periplasmic protein SapA 1256937 554290001178 SSPA1107 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide transport periplasmic protein SapA YP_002141946.1 1255288 R 554290 CDS YP_002141947.1 197362310 complement(1257049..1258029) 1 NC_011147.1 'transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor'; phage shock protein operon transcriptional activator 1258029 pspF 554290001179 pspF Salmonella enterica subsp. enterica serovar Paratyphi A str. phage shock protein operon transcriptional activator YP_002141947.1 1257049 R 554290 CDS YP_002141948.1 197362311 1258200..1258868 1 NC_011147.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 1258868 554290001180 SSPA1109 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage shock protein PspA YP_002141948.1 1258200 D 554290 CDS YP_002141949.1 197362312 1258928..1259152 1 NC_011147.1 'acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding'; phage shock protein B 1259152 pspB 554290001181 pspB Salmonella enterica subsp. enterica serovar Paratyphi A str. phage shock protein B YP_002141949.1 1258928 D 554290 CDS YP_002141950.1 197362313 1259152..1259511 1 NC_011147.1 'with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock'; DNA-binding transcriptional activator PspC 1259511 554290001182 SSPA1111 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator PspC YP_002141950.1 1259152 D 554290 CDS YP_002141951.1 197362314 1259534..1259752 1 NC_011147.1 similar to Salmonella typhi CT18 phage shock protein D; peripheral inner membrane phage-shock protein 1259752 554290001183 SSPA1112 Salmonella enterica subsp. enterica serovar Paratyphi A str. peripheral inner membrane phage-shock protein YP_002141951.1 1259534 D 554290 CDS YP_002141952.1 197362315 1259828..1260142 1 NC_011147.1 rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide; thiosulfate:cyanide sulfurtransferase 1260142 554290001184 SSPA1113 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiosulfate:cyanide sulfurtransferase YP_002141952.1 1259828 D 554290 CDS YP_002141953.1 197362316 1260291..1261688 1 NC_011147.1 similar to Salmonella typhi CT18 ATP-binding protein; ATP-binding protein 1261688 554290001185 SSPA1114 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-binding protein YP_002141953.1 1260291 D 554290 CDS YP_002141954.1 197362317 1261685..1262746 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1262746 554290001186 SSPA1115 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141954.1 1261685 D 554290 CDS YP_002141955.1 197362318 1262894..1264435 1 NC_011147.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 1264435 554290001187 SSPA1116 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator TyrR YP_002141955.1 1262894 D 554290 CDS YP_002141956.1 197362319 complement(1264525..1265031) 1 NC_011147.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 1265031 tpx 554290001188 tpx Salmonella enterica subsp. enterica serovar Paratyphi A str. thiol peroxidase YP_002141956.1 1264525 R 554290 CDS YP_002141957.1 197362320 1265147..1266112 1 NC_011147.1 similar to Salmonella typhi Ty2 mandelate racemase; mandelate racemase 1266112 554290001189 SSPA1118 Salmonella enterica subsp. enterica serovar Paratyphi A str. mandelate racemase YP_002141957.1 1265147 D 554290 CDS YP_002141958.1 197362321 complement(1266087..1266815) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; murein peptide amidase A 1266815 554290001190 SSPA1119 Salmonella enterica subsp. enterica serovar Paratyphi A str. murein peptide amidase A YP_002141958.1 1266087 R 554290 CDS YP_002141959.1 197362322 1267005..1268618 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic murein peptide-binding protein MppA; periplasmic murein peptide-binding protein MppA 1268618 554290001191 SSPA1120 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic murein peptide-binding protein MppA YP_002141959.1 1267005 D 554290 CDS YP_002141960.1 197362323 1269762..1270667 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1270667 554290001193 SSPA1121 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141960.1 1269762 D 554290 CDS YP_002141961.1 197362324 1270943..1271812 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1271812 554290001194 SSPA1122 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002141961.1 1270943 D 554290 CDS YP_002141962.1 197362325 complement(1271903..1272616) 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1272616 554290001195 SSPA1123 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002141962.1 1271903 R 554290 CDS YP_002141963.1 197362326 1272694..1273284 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1273284 554290001196 SSPA1124 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141963.1 1272694 D 554290 CDS YP_002141964.1 197362327 1273413..1273649 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1273649 554290001197 SSPA1125 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141964.1 1273413 D 554290 CDS YP_002141965.1 197362328 complement(1275359..1276210) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1276210 554290001199 SSPA1126 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002141965.1 1275359 R 554290 CDS YP_002141966.1 197362329 1276508..1277353 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1277353 554290001200 SSPA1127 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141966.1 1276508 D 554290 CDS YP_002141967.1 197362330 1279438..1280265 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1280265 554290001202 SSPA1128 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141967.1 1279438 D 554290 CDS YP_002141968.1 197362331 1280364..1280921 1 NC_011147.1 similar to Salmonella typhi CT18 thiol peroxidase; thiol peroxidase 1280921 554290001203 SSPA1129 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiol peroxidase YP_002141968.1 1280364 D 554290 CDS YP_002141969.1 197362332 complement(1281028..1281366) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1281366 554290001204 SSPA1130 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141969.1 1281028 R 554290 CDS YP_002141970.1 197362333 complement(1281394..1282080) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1282080 554290001205 SSPA1131 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141970.1 1281394 R 554290 CDS YP_002141971.1 197362334 1282124..1282726 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical DNA-binding protein; hypothetical protein 1282726 554290001206 SSPA1132 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141971.1 1282124 D 554290 CDS YP_002141972.1 197362335 complement(1282812..1283843) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1283843 554290001207 SSPA1133 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141972.1 1282812 R 554290 CDS YP_002141973.1 197362336 1284082..1284336 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1284336 554290001208 SSPA1134 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141973.1 1284082 D 554290 CDS YP_002141974.1 197362337 complement(1284391..1285338) 1 NC_011147.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 1285338 554290001209 SSPA1135 Salmonella enterica subsp. enterica serovar Paratyphi A str. universal stress protein UspE YP_002141974.1 1284391 R 554290 CDS YP_002141975.1 197362338 complement(1285489..1286283) 1 NC_011147.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 1286283 554290001210 SSPA1136 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate/nitrate reduction transcriptional regulator YP_002141975.1 1285489 R 554290 CDS YP_002141976.1 197362339 complement(1286437..1286952) 1 NC_011147.1 similar to Salmonella typhi CT18 O6-methylguanine-DNA-alkyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1286952 554290001211 SSPA1137 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-6-alkylguanine-DNA:cysteine-protein methyltransferase YP_002141976.1 1286437 R 554290 CDS YP_002141977.1 197362340 1287217..1287780 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1287780 554290001212 SSPA1138 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141977.1 1287217 D 554290 CDS YP_002141978.1 197362341 1289491..1290474 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; zinc transporter 1290474 zntB 554290001214 zntB Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc transporter YP_002141978.1 1289491 D 554290 CDS YP_002141979.1 197362342 1290961..1292334 1 NC_011147.1 'exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA'; ATP-dependent RNA helicase DbpA 1292334 554290001216 SSPA1140 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase DbpA YP_002141979.1 1290961 D 554290 CDS YP_002141980.1 197362343 complement(1292378..1293313) 1 NC_011147.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 1293313 554290001217 SSPA1141 Salmonella enterica subsp. enterica serovar Paratyphi A str. C32 tRNA thiolase YP_002141980.1 1292378 R 554290 CDS YP_002141981.1 197362344 1294001..1295833 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1295833 554290001218 SSPA1142 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141981.1 1294001 D 554290 CDS YP_002141982.1 197362345 1296108..1296446 1 NC_011147.1 similar to Salmonella typhi CT18 multidrug transporter; multidrug transporter 1296446 554290001219 SSPA1143 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug transporter YP_002141982.1 1296108 D 554290 CDS YP_002141983.1 197362346 complement(1296499..1296933) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1296933 554290001220 SSPA1144 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141983.1 1296499 R 554290 CDS YP_002141984.1 197362347 complement(1297415..1300939) 1 NC_011147.1 similar to Salmonella typhi CT18 probable pyruvate-flavodoxin oxidoreductase; pyruvate-flavodoxin oxidoreductase 1300939 554290001222 SSPA1145 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate-flavodoxin oxidoreductase YP_002141984.1 1297415 R 554290 CDS YP_002141985.2 449784931 1301215..1301481 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1301481 554290001223 SSPA1146 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141985.2 1301215 D 554290 CDS YP_002141986.1 197362349 complement(1301525..1301935) 1 NC_011147.1 similar to Salmonella typhi CT18 heat shock protein; heat-inducible protein 1301935 554290001224 SSPA1147 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat-inducible protein YP_002141986.1 1301525 R 554290 CDS YP_002141987.1 197362350 complement(1302046..1303035) 1 NC_011147.1 similar to Salmonella typhi CT18 D-lactate dehydrogenase; D-lactate dehydrogenase 1303035 554290001225 SSPA1148 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-lactate dehydrogenase YP_002141987.1 1302046 R 554290 CDS YP_002141988.1 197362351 1303275..1305911 1 NC_011147.1 similar to Salmonella typhimurium periplasmic protein; hypothetical protein 1305911 554290001226 SSPA1149 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141988.1 1303275 D 554290 CDS YP_002141989.1 197362352 1305911..1306102 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1306102 554290001227 SSPA1150 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002141989.1 1305911 D 554290 CDS YP_002141990.1 197362353 1306110..1306433 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1306433 554290001228 SSPA1151 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141990.1 1306110 D 554290 CDS YP_002141991.1 197362354 1306573..1307022 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1307022 554290001229 SSPA1152 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141991.1 1306573 D 554290 CDS YP_002141992.1 197362355 complement(1307019..1307624) 1 NC_011147.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 1307624 554290001230 SSPA1153 Salmonella enterica subsp. enterica serovar Paratyphi A str. azoreductase YP_002141992.1 1307019 R 554290 CDS YP_002141993.1 197362356 1307825..1311727 1 NC_011147.1 'involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain'; ATP-dependent RNA helicase HrpA 1311727 554290001231 SSPA1154 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase HrpA YP_002141993.1 1307825 D 554290 CDS YP_002141994.1 197362357 1311791..1313098 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 1313098 554290001232 SSPA1155 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002141994.1 1311791 D 554290 CDS YP_002141995.1 197362358 1313318..1314973 1 NC_011147.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 1314973 mdoD 554290001233 mdoD Salmonella enterica subsp. enterica serovar Paratyphi A str. glucan biosynthesis protein D YP_002141995.1 1313318 D 554290 CDS YP_002141996.1 197362359 1315178..1315744 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1315744 554290001234 SSPA1157 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002141996.1 1315178 D 554290 CDS YP_002141997.1 197362360 1315756..1316958 1 NC_011147.1 similar to Salmonella typhi CT18 glycolate oxidase; glycolate oxidase 1316958 554290001235 SSPA1158 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycolate oxidase YP_002141997.1 1315756 D 554290 CDS YP_002141998.1 197362361 complement(1317013..1317450) 1 NC_011147.1 similar to Salmonella typhi CT18 aminoglycoside 6'-N-acetyltransferase; aminoglycoside 6'-N-acetyltransferase 1317450 554290001236 SSPA1159 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminoglycoside 6'-N-acetyltransferase YP_002141998.1 1317013 R 554290 CDS YP_002141999.1 197362362 complement(1317450..1318241) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1318241 554290001237 SSPA1160 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002141999.1 1317450 R 554290 CDS YP_002142000.1 197362363 complement(1318257..1318889) 1 NC_011147.1 similar to Salmonella typhi CT18 ribulose-5-phosphate 3-epimerase; epimerase 1318889 554290001238 SSPA1161 Salmonella enterica subsp. enterica serovar Paratyphi A str. epimerase YP_002142000.1 1318257 R 554290 CDS YP_002142001.1 197362364 complement(1318901..1319338) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphotransferase enzyme; phosphotransferase protein 1319338 554290001239 SSPA1162 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransferase protein YP_002142001.1 1318901 R 554290 CDS YP_002142002.1 197362365 complement(1319470..1320276) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1320276 554290001240 SSPA1163 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142002.1 1319470 R 554290 CDS YP_002142003.1 197362366 complement(1320290..1321603) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphotransferase enzyme; phosphotransferase protein 1321603 554290001241 SSPA1164 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransferase protein YP_002142003.1 1320290 R 554290 CDS YP_002142004.1 197362367 complement(1321614..1321895) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphotransferase enzyme; phosphotransferase protein 1321895 554290001242 SSPA1165 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransferase protein YP_002142004.1 1321614 R 554290 CDS YP_002142005.1 197362368 complement(1321892..1323010) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1323010 554290001243 SSPA1166 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142005.1 1321892 R 554290 CDS YP_002142006.1 197362369 1323227..1323766 1 NC_011147.1 similar to Salmonella typhi CT18 ribosomal-protein-serine acetyltransferase; ribosomal-protein-L7/L12-serine acetyltransferase 1323766 554290001244 SSPA1167 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosomal-protein-L7/L12-serine acetyltransferase YP_002142006.1 1323227 D 554290 CDS YP_002142007.1 197362370 complement(1323763..1324743) 1 NC_011147.1 similar to Salmonella typhi CT18 transferase; transferase 1324743 554290001245 SSPA1168 Salmonella enterica subsp. enterica serovar Paratyphi A str. transferase YP_002142007.1 1323763 R 554290 CDS YP_002142008.1 197362371 1324850..1325863 1 NC_011147.1 similar to Salmonella typhi CT18 tellurite resistance protein TehA; potassium-tellurite ethidium and proflavin transporter 1325863 554290001246 SSPA1169 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium-tellurite ethidium and proflavin transporter YP_002142008.1 1324850 D 554290 CDS YP_002142009.1 197362372 1325850..1326446 1 NC_011147.1 with TehA confers resistance to tellurite; tellurite resistance protein TehB 1326446 554290001247 SSPA1170 Salmonella enterica subsp. enterica serovar Paratyphi A str. tellurite resistance protein TehB YP_002142009.1 1325850 D 554290 CDS YP_002142010.1 197362373 1326602..1327270 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1327270 554290001248 SSPA1171 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142010.1 1326602 D 554290 CDS YP_002142011.1 197362374 1328480..1330444 1 NC_011147.1 similar to Salmonella typhi CT18 peptidase; peptidase 1330444 554290001250 SSPA1172 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidase YP_002142011.1 1328480 D 554290 CDS YP_002142012.1 197362375 complement(1330445..1330675) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1330675 554290001251 SSPA1173 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142012.1 1330445 R 554290 CDS YP_002142013.1 197362376 1332427..1332825 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1332825 554290001253 SSPA1174 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142013.1 1332427 D 554290 CDS YP_002142014.1 197362377 1332858..1333088 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1333088 554290001254 SSPA1175 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142014.1 1332858 D 554290 CDS YP_002142016.1 197362379 1333350..1334120 1 NC_011147.1 similar to Salmonella typhi Ty2 D-alanyl-D-alanine dipeptidase; D-alanyl-D-alanine dipeptidase 1334120 554290001255 SSPA1177 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanyl-D-alanine dipeptidase YP_002142016.1 1333350 D 554290 CDS YP_002142017.1 197362380 1334256..1335680 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1335680 554290001256 SSPA1178 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142017.1 1334256 D 554290 CDS YP_002142018.1 197362381 1335795..1337240 1 NC_011147.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1337240 554290001257 SSPA1179 Salmonella enterica subsp. enterica serovar Paratyphi A str. gamma-aminobutyraldehyde dehydrogenase YP_002142018.1 1335795 D 554290 CDS YP_002142019.1 197362382 1337639..1337812 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 1337812 554290001258 SSPA1180 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142019.1 1337639 D 554290 CDS YP_002142020.1 197362383 complement(1337857..1340001) 1 NC_011147.1 similar to Salmonella typhi CT18 virulence effector protein; virulence effector protein 1340001 554290001259 SSPA1181 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence effector protein YP_002142020.1 1337857 R 554290 CDS YP_002142021.1 197362384 complement(1339998..1342979) 1 NC_011147.1 similar to Salmonella typhi CT18 virulence effector protein; virulence effector protein 1342979 554290001260 SSPA1182 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence effector protein YP_002142021.1 1339998 R 554290 CDS YP_002142022.2 449784932 complement(1342984..1344309) 1 NC_011147.1 similar to Salmonella typhi CT18 virulence effector protein; virulence effector protein 1344309 554290001261 SSPA1183 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence effector protein YP_002142022.2 1342984 R 554290 CDS YP_002142023.1 197362386 1344533..1344766 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1344766 554290001262 SSPA1184 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142023.1 1344533 D 554290 CDS YP_002142024.1 197362387 complement(1344771..1345220) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1345220 554290001263 SSPA1185 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142024.1 1344771 R 554290 CDS YP_002142025.1 197362388 complement(1345220..1345735) 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 1345735 554290001264 SSPA1186 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002142025.1 1345220 R 554290 CDS YP_002142026.1 197362389 1345914..1346984 1 NC_011147.1 similar to Salmonella typhi CT18 NADP-dependent oxidoreductase; NADP-dependent oxidoreductase 1346984 554290001265 SSPA1187 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADP-dependent oxidoreductase YP_002142026.1 1345914 D 554290 CDS YP_002142027.1 197362390 1347318..1347983 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; DNA-binding transcriptional regulator 1347983 554290001266 SSPA1188 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002142027.1 1347318 D 554290 CDS YP_002142028.1 197362391 complement(1348039..1350159) 1 NC_011147.1 similar to Salmonella typhi Ty2 probable TonB-dependent receptor; TonB-dependent receptor 1350159 554290001267 SSPA1190 Salmonella enterica subsp. enterica serovar Paratyphi A str. TonB-dependent receptor YP_002142028.1 1348039 R 554290 CDS YP_002142029.1 197362392 1350423..1351484 1 NC_011147.1 similar to Salmonella typhi CT18 possible ATP-binding protein; ATP-binding protein 1351484 554290001268 SSPA1191 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-binding protein YP_002142029.1 1350423 D 554290 CDS YP_002142030.1 197362393 1351629..1351850 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1351850 554290001269 SSPA1192 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142030.1 1351629 D 554290 CDS YP_002142031.1 197362394 complement(1351927..1353420) 1 NC_011147.1 similar to Salmonella typhi CT18 L-asparagine permease; L-asparagine permease 1353420 554290001270 SSPA1193 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-asparagine permease YP_002142031.1 1351927 R 554290 CDS YP_002142032.1 197362395 1353933..1354565 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1354565 554290001271 SSPA1194 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142032.1 1353933 D 554290 CDS YP_002142033.1 197362396 1354848..1355693 1 NC_011147.1 similar to Salmonella typhi CT18 N-hydroxyarylamine O-acetyltransferase; N-hydroxyarylamine O-acetyltransferase 1355693 554290001272 SSPA1195 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-hydroxyarylamine O-acetyltransferase YP_002142033.1 1354848 D 554290 CDS YP_002142034.1 197362397 complement(1355729..1356622) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1356622 554290001273 SSPA1196 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142034.1 1355729 R 554290 CDS YP_002142035.1 197362398 complement(1356728..1357408) 1 NC_011147.1 'similar to Salmonella typhimurium nitrate reductase 2, gamma subunit'; nitrate reductase subunit gamma 1357408 554290001274 SSPA1197 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrate reductase subunit gamma YP_002142035.1 1356728 R 554290 CDS YP_002142036.1 197362399 complement(1358086..1359630) 1 NC_011147.1 similar to Salmonella typhi CT18 respiratory nitrate reductase 2 beta chain; respiratory nitrate reductase 2 subunit beta 1359630 554290001276 SSPA1198 Salmonella enterica subsp. enterica serovar Paratyphi A str. respiratory nitrate reductase 2 subunit beta YP_002142036.1 1358086 R 554290 CDS YP_002142037.1 197362400 complement(1359627..1363367) 1 NC_011147.1 similar to Salmonella typhi CT18 respiratory nitrate reductase 2 alpha chain; respiratory nitrate reductase 2 subunit alpha 1363367 554290001277 SSPA1199 Salmonella enterica subsp. enterica serovar Paratyphi A str. respiratory nitrate reductase 2 subunit alpha YP_002142037.1 1359627 R 554290 CDS YP_002142038.1 197362401 complement(1363459..1364847) 1 NC_011147.1 similar to Salmonella typhi CT18 nitrite extrusion protein; nitrite extrusion protein 1364847 554290001278 SSPA1201 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrite extrusion protein YP_002142038.1 1363459 R 554290 CDS YP_002142040.1 197362403 complement(1365061..1365639) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1365639 554290001279 SSPA1202 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142040.1 1365061 R 554290 CDS YP_002142041.1 197362404 1365757..1367244 1 NC_011147.1 similar to Salmonella typhi CT18 methyl viologen resistance protein SmvA; methyl viologen resistance protein SmvA 1367244 554290001280 SSPA1203 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyl viologen resistance protein SmvA YP_002142041.1 1365757 D 554290 CDS YP_002142042.1 197362405 complement(1367269..1367709) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1367709 554290001281 SSPA1204 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142042.1 1367269 R 554290 CDS YP_002142043.1 197362406 complement(1368779..1369987) 1 NC_011147.1 IS10; IS10 transposase 1369987 554290001283 SSPA1204b Salmonella enterica subsp. enterica serovar Paratyphi A str. IS10 transposase YP_002142043.1 1368779 R 554290 CDS YP_002142044.1 197362407 complement(1370742..1371566) 1 NC_011147.1 similar to Salmonella typhimurium permease; hypothetical protein 1371566 554290001284 SSPA1205 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142044.1 1370742 R 554290 CDS YP_002142045.1 197362408 join(1371901..1372486,1372538..1374948) 1 NC_011147.1 'similar to Salmonella typhimurium molybdopterin oxidoreductases; selenocysteine; Highly similar to Escherichia coli formate dehydrogenase-O, major subunit fdoG SW:FDOG_ECOLI (P32176; P78131) (1016 aa). Contains a stop codon which is encoded as a selenocysteine by the opal codon UGA.'; molybdopterin oxidoreductases 1374948 554290001285 SSPA1206 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin oxidoreductases YP_002142045.1 1371901 D 554290 CDS YP_002142046.1 197362409 join(1374962..1375547,1375599..1375846) 1 NC_011147.1 'similar to Salmonella typhimurium formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible'; formate dehydrogenase-N, Fe-S subunit beta 1375846 554290001286 SSPA1207 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate dehydrogenase-N, Fe-S subunit beta YP_002142046.1 1374962 D 554290 CDS YP_002142047.1 197362410 1375854..1376495 1 NC_011147.1 'nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase'; formate dehydrogenase-N subunit gamma 1376495 554290001287 SSPA1208 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate dehydrogenase-N subunit gamma YP_002142047.1 1375854 D 554290 CDS YP_002142048.1 197362411 complement(1376586..1377596) 1 NC_011147.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase 1377596 554290001288 SSPA1209 Salmonella enterica subsp. enterica serovar Paratyphi A str. alcohol dehydrogenase YP_002142048.1 1376586 R 554290 CDS YP_002142049.1 197362412 complement(1377898..1379631) 1 NC_011147.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1379631 554290001289 SSPA1210 Salmonella enterica subsp. enterica serovar Paratyphi A str. malate dehydrogenase YP_002142049.1 1377898 R 554290 CDS YP_002142050.1 197362413 complement(1379772..1379915) 1 NC_011147.1 protein D; stationary-phase-induced ribosome-associated; in Escherichia coli this protein becomes associated with the ribosome; expression increases during stationary phase; 30S ribosomal subunit S22 1379915 rpsV 554290001290 rpsV Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal subunit S22 YP_002142050.1 1379772 R 554290 CDS YP_002142051.1 197362414 complement(1380010..1380225) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; biofilm-dependent modulation protein 1380225 554290001291 SSPA1212 Salmonella enterica subsp. enterica serovar Paratyphi A str. biofilm-dependent modulation protein YP_002142051.1 1380010 R 554290 CDS YP_002142052.1 197362415 1380737..1381168 1 NC_011147.1 similar to Salmonella typhi CT18 osmotically inducible protein C; osmotically inducible protein C 1381168 554290001292 SSPA1213 Salmonella enterica subsp. enterica serovar Paratyphi A str. osmotically inducible protein C YP_002142052.1 1380737 D 554290 CDS YP_002142053.1 197362416 complement(1381289..1382206) 1 NC_011147.1 Acts by forming a pore-like structure upon contact with mammalian cells; hemolysin E 1382206 hlyE 554290001293 hlyE Salmonella enterica subsp. enterica serovar Paratyphi A str. hemolysin E YP_002142053.1 1381289 R 554290 CDS YP_002142054.1 197362417 1383743..1384072 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; acid-resistance protein 1384072 hdeB 554290001295 hdeB Salmonella enterica subsp. enterica serovar Paratyphi A str. acid-resistance protein YP_002142054.1 1383743 D 554290 CDS YP_002142055.2 449784933 1384215..1385000 1 NC_011147.1 hypothetical protein 1385000 554290001296 SSPA1216 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142055.2 1384215 D 554290 CDS YP_002142056.1 197362419 1385129..1386913 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hydrolase 1386913 554290001297 SSPA1217 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002142056.1 1385129 D 554290 CDS YP_002142057.1 197362420 1386910..1389438 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hydrolase 1389438 554290001298 SSPA1218 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002142057.1 1386910 D 554290 CDS YP_002142058.1 197362421 1389495..1391570 1 NC_011147.1 glycogen debranching protein-like protein 1391570 554290001299 SSPA1219 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycogen debranching protein-like protein YP_002142058.1 1389495 D 554290 CDS YP_002142059.1 197362422 complement(1391684..1392886) 1 NC_011147.1 similar to Salmonella typhi CT18 aminotransferase; aminotransferase 1392886 554290001300 SSPA1220 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminotransferase YP_002142059.1 1391684 R 554290 CDS YP_002142060.1 197362423 complement(1395375..1396268) 1 NC_011147.1 hypothetical protein 1396268 554290001302 SSPA1221 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142060.1 1395375 R 554290 CDS YP_002142061.1 197362424 complement(1396461..1396691) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1396691 554290001303 SSPA1222 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142061.1 1396461 R 554290 CDS YP_002142062.1 197362425 1397184..1398287 1 NC_011147.1 similar to Salmonella typhi Ty2 uptake hydrogenase small subunit; uptake hydrogenase small subunit 1398287 554290001304 SSPA1223 Salmonella enterica subsp. enterica serovar Paratyphi A str. uptake hydrogenase small subunit YP_002142062.1 1397184 D 554290 CDS YP_002142063.1 197362426 1398290..1400092 1 NC_011147.1 similar to Escherichia coli K12 hydrogenase-1 large subunit; hydrogenase-1 large subunit 1400092 554290001305 SSPA1224 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase-1 large subunit YP_002142063.1 1398290 D 554290 CDS YP_002142064.1 197362427 1400043..1400786 1 NC_011147.1 similar to Salmonella typhi Ty2 Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2; Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 1400786 554290001306 SSPA1225 Salmonella enterica subsp. enterica serovar Paratyphi A str. Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 YP_002142064.1 1400043 D 554290 CDS YP_002142065.1 197362428 1400792..1401400 1 NC_011147.1 similar to Salmonella typhi Ty2 hydrogenase 1 maturation protease; hydrogenase 1 maturation protease 1401400 554290001307 SSPA1226 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 1 maturation protease YP_002142065.1 1400792 D 554290 CDS YP_002142066.1 197362429 1401703..1402113 1 NC_011147.1 similar to Salmonella typhi Ty2 hydrogenase-1 operon protein HyaE2; hydrogenase-1 operon protein HyaE2 1402113 554290001309 SSPA1227 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase-1 operon protein HyaE2 YP_002142066.1 1401703 D 554290 CDS YP_002142067.1 197362430 1402131..1403192 1 NC_011147.1 similar to Salmonella typhi Ty2 hydrogenase-1 operon protein HyaF2; hydrogenase-1 operon protein HyaF2 1403192 554290001310 SSPA1228 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase-1 operon protein HyaF2 YP_002142067.1 1402131 D 554290 CDS YP_002142068.1 197362431 1403180..1404067 1 NC_011147.1 similar to Salmonella typhi CT18 ATP/GTP-binding protein; ATP/GTP-binding protein 1404067 554290001311 SSPA1229 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP/GTP-binding protein YP_002142068.1 1403180 D 554290 CDS YP_002142069.1 197362432 1404080..1404421 1 NC_011147.1 similar to Salmonella typhimurium hydrogenase; hydrogenase 1404421 554290001312 SSPA1230 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase YP_002142069.1 1404080 D 554290 CDS YP_002142070.2 449784934 complement(1404562..1405680) 1 NC_011147.1 similar to Salmonella typhimurium outer membrane protein; outer membrane protein 1405680 554290001313 SSPA1231 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142070.2 1404562 R 554290 CDS YP_002142071.1 197362434 1406397..1406939 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1406939 554290001314 SSPA1232 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142071.1 1406397 D 554290 CDS YP_002142072.1 197362435 complement(1406995..1407942) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1407942 554290001315 SSPA1233 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142072.1 1406995 R 554290 CDS YP_002142073.1 197362436 complement(1408159..1408518) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1408518 554290001316 SSPA1234 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142073.1 1408159 R 554290 CDS YP_002142074.1 197362437 complement(1408518..1409432) 1 NC_011147.1 catalyzes the formation of glutamate from glutamine; glutaminase 1409432 554290001317 SSPA1235 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutaminase YP_002142074.1 1408518 R 554290 CDS YP_002142075.1 197362438 complement(1409517..1410905) 1 NC_011147.1 in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; succinate semialdehyde dehydrogenase 1410905 554290001318 SSPA1236 Salmonella enterica subsp. enterica serovar Paratyphi A str. succinate semialdehyde dehydrogenase YP_002142075.1 1409517 R 554290 CDS YP_002142076.1 197362439 1411008..1411880 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1411880 554290001319 SSPA1237 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142076.1 1411008 D 554290 CDS YP_002142077.1 197362440 1411996..1413186 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; sugar efflux transporter 1413186 554290001320 SSPA1238 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar efflux transporter YP_002142077.1 1411996 D 554290 CDS YP_002142078.1 197362441 complement(1413233..1413898) 1 NC_011147.1 'protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function'; multiple drug resistance protein MarC 1413898 554290001321 SSPA1239 Salmonella enterica subsp. enterica serovar Paratyphi A str. multiple drug resistance protein MarC YP_002142078.1 1413233 R 554290 CDS YP_002142079.1 197362442 1414157..1414591 1 NC_011147.1 Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes; DNA-binding transcriptional repressor MarR 1414591 554290001322 SSPA1240 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor MarR YP_002142079.1 1414157 D 554290 CDS YP_002142080.1 197362443 1414560..1414994 1 NC_011147.1 'transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF'; DNA-binding transcriptional activator MarA 1414994 554290001323 SSPA1241 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator MarA YP_002142080.1 1414560 D 554290 CDS YP_002142083.1 197362446 1415803..1415925 1 NC_011147.1 hypothetical protein 1415925 554290001325 SSPA1244 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142083.1 1415803 D 554290 CDS YP_002142084.1 197362447 complement(1416274..1416666) 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic protein; hypothetical protein 1416666 554290001326 SSPA1245 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142084.1 1416274 R 554290 CDS YP_002142085.1 197362448 1417093..1417620 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; competence damage-inducible protein A 1417620 554290001327 SSPA1246 Salmonella enterica subsp. enterica serovar Paratyphi A str. competence damage-inducible protein A YP_002142085.1 1417093 D 554290 CDS YP_002142086.1 197362449 complement(1417740..1417922) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1417922 554290001328 SSPA1247 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142086.1 1417740 R 554290 CDS YP_002142087.1 197362450 complement(1418267..1420309) 1 NC_011147.1 similar to Salmonella typhi CT18 dipeptidyl carboxypeptidase II; dipeptidyl carboxypeptidase II 1420309 554290001329 SSPA1248 Salmonella enterica subsp. enterica serovar Paratyphi A str. dipeptidyl carboxypeptidase II YP_002142087.1 1418267 R 554290 CDS YP_002142088.1 197362451 1420448..1421194 1 NC_011147.1 'NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine'; 3-hydroxy acid dehydrogenase 1421194 554290001330 SSPA1249 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-hydroxy acid dehydrogenase YP_002142088.1 1420448 D 554290 CDS YP_002142089.1 197362452 1421323..1422009 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1422009 554290001331 SSPA1250 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142089.1 1421323 D 554290 CDS YP_002142090.1 197362453 1422190..1422393 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1422393 554290001332 SSPA1251 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142090.1 1422190 D 554290 CDS YP_002142091.1 197362454 complement(1422460..1423926) 1 NC_011147.1 similar to Salmonella typhimurium mannitol dehydrogenase; mannitol dehydrogenase 1423926 554290001333 SSPA1252 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannitol dehydrogenase YP_002142091.1 1422460 R 554290 CDS YP_002142092.1 197362455 complement(1424070..1425449) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein 1425449 554290001334 SSPA1253 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002142092.1 1424070 R 554290 CDS YP_002142093.1 197362456 complement(1425503..1426522) 1 NC_011147.1 similar to Salmonella typhimurium dehydrogenase; dehydrogenase 1426522 554290001335 SSPA1254 Salmonella enterica subsp. enterica serovar Paratyphi A str. dehydrogenase YP_002142093.1 1425503 R 554290 CDS YP_002142094.1 197362457 complement(1426533..1427747) 1 NC_011147.1 similar to Salmonella typhi CT18 starvation sensing protein RspA; starvation sensing protein RspA 1427747 554290001336 SSPA1255 Salmonella enterica subsp. enterica serovar Paratyphi A str. starvation sensing protein RspA YP_002142094.1 1426533 R 554290 CDS YP_002142095.1 197362458 complement(1427869..1428195) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1428195 554290001337 SSPA1256 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142095.1 1427869 R 554290 CDS YP_002142096.1 197362459 1428348..1428689 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1428689 554290001338 SSPA1257 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142096.1 1428348 D 554290 CDS YP_002142097.1 197362460 1428725..1429285 1 NC_011147.1 similar to Salmonella typhi CT18 spermidine N1-acetyltransferase; spermidine N1-acetyltransferase 1429285 554290001339 SSPA1258 Salmonella enterica subsp. enterica serovar Paratyphi A str. spermidine N1-acetyltransferase YP_002142097.1 1428725 D 554290 CDS YP_002142098.1 197362461 complement(1429326..1430045) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1430045 554290001340 SSPA1259 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142098.1 1429326 R 554290 CDS YP_002142099.1 197362462 1430140..1430448 1 NC_011147.1 hypothetical protein 1430448 554290001341 SSPA1260 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142099.1 1430140 D 554290 CDS YP_002142100.1 197362463 1430605..1433043 1 NC_011147.1 anaerobic dimethyl sulfoxide reductase subunit A 1433043 554290001342 SSPA1261 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic dimethyl sulfoxide reductase subunit A YP_002142100.1 1430605 D 554290 CDS YP_002142101.1 197362464 1433054..1433671 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain B; anaerobic dimethyl sulfoxide reductase subunit B 1433671 554290001343 SSPA1262 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic dimethyl sulfoxide reductase subunit B YP_002142101.1 1433054 D 554290 CDS YP_002142102.1 197362465 1433673..1434530 1 NC_011147.1 similar to Salmonella typhi CT18 dimethyl sulphoxide reductase subunit; dimethyl sulfoxide reductase subunit 1434530 554290001344 SSPA1263 Salmonella enterica subsp. enterica serovar Paratyphi A str. dimethyl sulfoxide reductase subunit YP_002142102.1 1433673 D 554290 CDS YP_002142103.1 197362466 1434573..1435187 1 NC_011147.1 'binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane'; twin-argninine leader-binding protein DmsD 1435187 554290001345 SSPA1264 Salmonella enterica subsp. enterica serovar Paratyphi A str. twin-argninine leader-binding protein DmsD YP_002142103.1 1434573 D 554290 CDS YP_002142104.1 197362467 1435492..1436202 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter membrane protein; ABC transporter membrane protein 1436202 554290001346 SSPA1265 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter membrane protein YP_002142104.1 1435492 D 554290 CDS YP_002142105.1 197362468 1436231..1437133 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter periplasmic binding protein; ABC transporter substrate-binding protein 1437133 554290001347 SSPA1266 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter substrate-binding protein YP_002142105.1 1436231 D 554290 CDS YP_002142106.1 197362469 1437143..1437790 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter membrane protein; ABC transporter membrane protein 1437790 554290001348 SSPA1267 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter membrane protein YP_002142106.1 1437143 D 554290 CDS YP_002142107.1 197362470 1437790..1438938 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP/GTP-binding protein; ABC transporter ATP/GTP-binding protein 1438938 554290001349 SSPA1268 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP/GTP-binding protein YP_002142107.1 1437790 D 554290 CDS YP_002142108.1 197362471 complement(1440315..1441010) 1 NC_011147.1 'DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium'; dithiobiotin synthetase 1441010 554290001351 SSPA1269 Salmonella enterica subsp. enterica serovar Paratyphi A str. dithiobiotin synthetase YP_002142108.1 1440315 R 554290 CDS YP_002142109.1 197362472 complement(1441136..1442356) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1442356 554290001352 SSPA1270 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142109.1 1441136 R 554290 CDS YP_002142110.1 197362473 complement(1442484..1443383) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1443383 554290001353 SSPA1271 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142110.1 1442484 R 554290 CDS YP_002142111.1 197362474 1443503..1444756 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein 1444756 554290001354 SSPA1272 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002142111.1 1443503 D 554290 CDS YP_002142112.1 197362475 1445671..1446492 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1446492 554290001355 SSPA1273 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142112.1 1445671 D 554290 CDS YP_002142113.1 197362476 complement(1446846..1447208) 1 NC_011147.1 'with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS'; multidrug efflux system protein MdtJ 1447208 554290001357 SSPA1274 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug efflux system protein MdtJ YP_002142113.1 1446846 R 554290 CDS YP_002142114.1 197362477 complement(1447320..1447490) 1 NC_011147.1 hypothetical protein 1447490 554290001358 SSPA1275 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142114.1 1447320 R 554290 CDS YP_002142115.1 197362478 1447625..1448659 1 NC_011147.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; transporter 1448659 tqsA 554290001359 tqsA Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002142115.1 1447625 D 554290 CDS YP_002142116.2 449784935 complement(1448834..1450222) 1 NC_011147.1 similar to Salmonella typhi CT18 pyridine nucleotide transhydrogenase subunit-beta; pyridine nucleotide transhydrogenase subunit-beta 1450222 554290001360 SSPA1277 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyridine nucleotide transhydrogenase subunit-beta YP_002142116.2 1448834 R 554290 CDS YP_002142117.1 197362480 complement(1450233..1451762) 1 NC_011147.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 1451762 pntA 554290001361 pntA Salmonella enterica subsp. enterica serovar Paratyphi A str. NAD(P) transhydrogenase subunit alpha YP_002142117.1 1450233 R 554290 CDS YP_002142118.1 197362481 1452289..1453233 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1453233 554290001362 SSPA1279 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142118.1 1452289 D 554290 CDS YP_002142119.1 197362482 1453532..1454914 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid permease; amino acid permease 1454914 554290001363 SSPA1280 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid permease YP_002142119.1 1453532 D 554290 CDS YP_002142120.1 197362483 complement(1454976..1455350) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1455350 554290001364 SSPA1281 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142120.1 1454976 R 554290 CDS YP_002142121.1 197362484 1455437..1456168 1 NC_011147.1 response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 1456168 554290001365 SSPA1282 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator RstA YP_002142121.1 1455437 D 554290 CDS YP_002142122.1 197362485 1456647..1457798 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 1457798 554290001367 SSPA1283 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142122.1 1456647 D 554290 CDS YP_002142123.1 197362486 1457952..1459658 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1459658 554290001368 SSPA1284 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142123.1 1457952 D 554290 CDS YP_002142124.1 197362487 1459766..1461070 1 NC_011147.1 similar to Salmonella typhi CT18 two component sensor kinase; sensor protein RstB 1461070 554290001369 SSPA1285 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor protein RstB YP_002142124.1 1459766 D 554290 CDS YP_002142125.1 197362488 1461146..1462075 1 NC_011147.1 binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 1462075 554290001370 SSPA1286 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA replication terminus site-binding protein YP_002142125.1 1461146 D 554290 CDS YP_002142126.1 197362489 complement(1462072..1463475) 1 NC_011147.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1463475 fumC 554290001371 fumC Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate hydratase YP_002142126.1 1462072 R 554290 CDS YP_002142127.1 197362490 complement(1463643..1465289) 1 NC_011147.1 'similar to Salmonella typhi CT18 Fumarate hydratase class I, aerobic'; fumarate hydratase 1465289 554290001372 SSPA1288 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate hydratase YP_002142127.1 1463643 R 554290 CDS YP_002142128.1 197362491 1465489..1466664 1 NC_011147.1 similar to Salmonella typhi CT18 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1466664 554290001373 SSPA1289 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannose-6-phosphate isomerase YP_002142128.1 1465489 D 554290 CDS YP_002142129.1 197362492 1466767..1468275 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1468275 554290001374 SSPA1290 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142129.1 1466767 D 554290 CDS YP_002142130.1 197362493 complement(1470056..1471168) 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1471168 554290001378 SSPA1291 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002142130.1 1470056 R 554290 CDS YP_002142131.1 197362494 1471728..1471943 1 NC_011147.1 'YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes'; oriC-binding nucleoid-associated protein 1471943 554290001379 SSPA1292 Salmonella enterica subsp. enterica serovar Paratyphi A str. oriC-binding nucleoid-associated protein YP_002142131.1 1471728 D 554290 CDS YP_002142132.1 197362495 1472032..1472472 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1472472 554290001380 SSPA1293 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142132.1 1472032 D 554290 CDS YP_002142133.1 197362496 1472549..1473130 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; Na(+)-translocating NADH-quinone reductase subunit E 1473130 554290001381 SSPA1294 Salmonella enterica subsp. enterica serovar Paratyphi A str. Na(+)-translocating NADH-quinone reductase subunit E YP_002142133.1 1472549 D 554290 CDS YP_002142134.1 197362497 1473130..1473708 1 NC_011147.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 1473708 554290001382 SSPA1295 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transport complex protein RnfB YP_002142134.1 1473130 D 554290 CDS YP_002142135.1 197362498 1473701..1475908 1 NC_011147.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 1475908 554290001383 SSPA1296 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transport complex protein RnfC YP_002142135.1 1473701 D 554290 CDS YP_002142136.1 197362499 1475909..1476967 1 NC_011147.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 1476967 rnfD 554290001384 rnfD Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transport complex protein RnfD YP_002142136.1 1475909 D 554290 CDS YP_002142137.1 197362500 1476971..1477591 1 NC_011147.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 1477591 554290001385 SSPA1298 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transport complex protein RnfG YP_002142137.1 1476971 D 554290 CDS YP_002142138.1 197362501 1477594..1478286 1 NC_011147.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1478286 554290001386 SSPA1299 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transport complex protein RsxE YP_002142138.1 1477594 D 554290 CDS YP_002142139.1 197362502 1478286..1478921 1 NC_011147.1 'DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines'; endonuclease III 1478921 554290001387 SSPA1300 Salmonella enterica subsp. enterica serovar Paratyphi A str. endonuclease III YP_002142139.1 1478286 D 554290 CDS YP_002142140.1 197362503 1479523..1481028 1 NC_011147.1 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease 1481028 tppB 554290001388 tppB Salmonella enterica subsp. enterica serovar Paratyphi A str. tripeptide transporter permease YP_002142140.1 1479523 D 554290 CDS YP_002142141.1 197362504 1481133..1481738 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione S-transferase; glutathionine S-transferase 1481738 554290001389 SSPA1302 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathionine S-transferase YP_002142141.1 1481133 D 554290 CDS YP_002142142.1 197362505 complement(1481797..1482657) 1 NC_011147.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1482657 554290001390 SSPA1303 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyridoxamine kinase YP_002142142.1 1481797 R 554290 CDS YP_002142143.1 197362506 complement(1482717..1483991) 1 NC_011147.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1483991 554290001391 SSPA1304 Salmonella enterica subsp. enterica serovar Paratyphi A str. tyrosyl-tRNA synthetase YP_002142143.1 1482717 R 554290 CDS YP_002142144.1 197362507 complement(1484118..1484774) 1 NC_011147.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 1484774 554290001392 SSPA1305 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyridoxamine 5'-phosphate oxidase YP_002142144.1 1484118 R 554290 CDS YP_002142145.1 197362508 complement(1484833..1485162) 1 NC_011147.1 MliC; membrane-bound lysozyme inhibitor of c-type lysozyme; lysozyme inhibitor 1485162 554290001393 SSPA1306 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysozyme inhibitor YP_002142145.1 1484833 R 554290 CDS YP_002142146.1 197362509 complement(1485250..1486371) 1 NC_011147.1 'catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling'; anhydro-N-acetylmuramic acid kinase 1486371 anmK 554290001394 anmK Salmonella enterica subsp. enterica serovar Paratyphi A str. anhydro-N-acetylmuramic acid kinase YP_002142146.1 1485250 R 554290 CDS YP_002142147.1 197362510 1486643..1487110 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane lipoprotein SlyB precursor; outer membrane lipoprotein SlyB 1487110 554290001395 SSPA1308 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein SlyB YP_002142147.1 1486643 D 554290 CDS YP_002142148.1 197362511 complement(1487158..1487592) 1 NC_011147.1 Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 1487592 554290001396 SSPA1309 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator SlyA YP_002142148.1 1487158 R 554290 CDS YP_002142149.1 197362512 1487793..1488029 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1488029 554290001397 SSPA1310 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142149.1 1487793 D 554290 CDS YP_002142150.1 197362513 1487996..1488892 1 NC_011147.1 similar to Salmonella typhi CT18 HlyD-family protein; HlyD family protein 1488892 554290001398 SSPA1311 Salmonella enterica subsp. enterica serovar Paratyphi A str. HlyD family protein YP_002142150.1 1487996 D 554290 CDS YP_002142151.1 197362514 1488892..1490931 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1490931 554290001399 SSPA1312 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142151.1 1488892 D 554290 CDS YP_002142152.1 197362515 complement(1490907..1491428) 1 NC_011147.1 SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water; superoxide dismutase 1491428 554290001400 SSPA1313 Salmonella enterica subsp. enterica serovar Paratyphi A str. superoxide dismutase YP_002142152.1 1490907 R 554290 CDS YP_002142153.1 197362516 complement(1491508..1492404) 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1492404 554290001401 SSPA1314 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002142153.1 1491508 R 554290 CDS YP_002142154.1 197362517 complement(1492455..1492694) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1492694 554290001402 SSPA1315 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142154.1 1492455 R 554290 CDS YP_002142155.1 197362518 1492797..1493396 1 NC_011147.1 similar to Salmonella typhi CT18 TetR-family transcriptional regulator; TetR family regulatory protein 1493396 554290001403 SSPA1316 Salmonella enterica subsp. enterica serovar Paratyphi A str. TetR family regulatory protein YP_002142155.1 1492797 D 554290 CDS YP_002142156.1 197362519 1493455..1494552 1 NC_011147.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 1494552 554290001404 SSPA1317 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-ethylmaleimide reductase YP_002142156.1 1493455 D 554290 CDS YP_002142157.1 197362520 1494621..1495028 1 NC_011147.1 Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; glyoxalase I 1495028 554290001405 SSPA1318 Salmonella enterica subsp. enterica serovar Paratyphi A str. glyoxalase I YP_002142157.1 1494621 D 554290 CDS YP_002142158.1 197362521 1495129..1495776 1 NC_011147.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 1495776 554290001406 SSPA1319 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease T YP_002142158.1 1495129 D 554290 CDS YP_002142159.1 197362522 complement(1495854..1496201) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1496201 554290001407 SSPA1320 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142159.1 1495854 R 554290 CDS YP_002142160.1 197362523 1496504..1497358 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1497358 554290001408 SSPA1321 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142160.1 1496504 D 554290 CDS YP_002142161.1 197362524 1497485..1498066 1 NC_011147.1 SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase 1498066 554290001409 SSPA1322 Salmonella enterica subsp. enterica serovar Paratyphi A str. superoxide dismutase YP_002142161.1 1497485 D 554290 CDS YP_002142162.1 197362525 1498534..1499559 1 NC_011147.1 'binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers'; DNA-binding transcriptional repressor PurR 1499559 554290001410 SSPA1323 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor PurR YP_002142162.1 1498534 D 554290 CDS YP_002142163.1 197362526 complement(1499556..1500488) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; DNA-binding transcriptional regulator 1500488 554290001411 SSPA1324 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002142163.1 1499556 R 554290 CDS YP_002142164.1 197362527 1500601..1501806 1 NC_011147.1 uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 1501806 554290001412 SSPA1325 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane transport protein YdhC YP_002142164.1 1500601 D 554290 CDS YP_002142165.2 449784936 1502096..1503244 1 NC_011147.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 1503244 554290001413 SSPA1326 Salmonella enterica subsp. enterica serovar Paratyphi A str. cyclopropane-fatty-acyl-phospholipid synthase YP_002142165.2 1502096 D 554290 CDS YP_002142166.1 197362529 complement(1503286..1503927) 1 NC_011147.1 'catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine'; riboflavin synthase subunit alpha 1503927 554290001414 SSPA1327 Salmonella enterica subsp. enterica serovar Paratyphi A str. riboflavin synthase subunit alpha YP_002142166.1 1503286 R 554290 CDS YP_002142167.1 197362530 1504144..1505517 1 NC_011147.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 1505517 554290001415 SSPA1328 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug efflux protein YP_002142167.1 1504144 D 554290 CDS YP_002142168.1 197362531 complement(1505990..1507048) 1 NC_011147.1 'member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli'; secretion system apparatus protein SsaU 1507048 554290001418 SSPA1329 Salmonella enterica subsp. enterica serovar Paratyphi A str. secretion system apparatus protein SsaU YP_002142168.1 1505990 R 554290 CDS YP_002142169.1 197362532 complement(1507045..1507824) 1 NC_011147.1 similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein 1507824 554290001419 SSPA1330 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion protein YP_002142169.1 1507045 R 554290 CDS YP_002142170.1 197362533 complement(1507825..1508091) 1 NC_011147.1 similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein 1508091 554290001420 SSPA1331 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion protein YP_002142170.1 1507825 R 554290 CDS YP_002142171.1 197362534 complement(1508088..1508735) 1 NC_011147.1 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 1508735 554290001421 SSPA1332 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion system protein YP_002142171.1 1508088 R 554290 CDS YP_002142172.1 197362535 complement(1508803..1509771) 1 NC_011147.1 similar to Salmonella typhi CT18 type III secretion protein; type III secretion system protein 1509771 554290001422 SSPA1333 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion system protein YP_002142172.1 1508803 R 554290 CDS YP_002142173.1 197362536 complement(1509752..1510126) 1 NC_011147.1 similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein 1510126 554290001423 SSPA1334 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion protein YP_002142173.1 1509752 R 554290 CDS YP_002142174.1 197362537 complement(1510107..1510484) 1 NC_011147.1 similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein 1510484 554290001424 SSPA1335 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion protein YP_002142174.1 1510107 R 554290 CDS YP_002142175.1 197362538 complement(1510487..1511788) 1 NC_011147.1 similar to Salmonella typhi CT18 type III secretion ATP synthase; type III secretion system ATPase 1511788 554290001425 SSPA1336 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion system ATPase YP_002142175.1 1510487 R 554290 CDS YP_002142176.1 197362539 complement(1511778..1513823) 1 NC_011147.1 with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system; secretion system apparatus protein SsaV 1513823 554290001426 SSPA1337 Salmonella enterica subsp. enterica serovar Paratyphi A str. secretion system apparatus protein SsaV YP_002142176.1 1511778 R 554290 CDS YP_002142177.1 197362540 complement(1513808..1514176) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1514176 554290001427 SSPA1338 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142177.1 1513808 R 554290 CDS YP_002142178.1 197362541 complement(1514234..1515226) 1 NC_011147.1 similar to Salmonella typhi CT18 secretion system protein; secretion system protein 1515226 554290001428 SSPA1339 Salmonella enterica subsp. enterica serovar Paratyphi A str. secretion system protein YP_002142178.1 1514234 R 554290 CDS YP_002142179.1 197362542 complement(1515216..1515890) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1515890 554290001429 SSPA1340 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142179.1 1515216 R 554290 CDS YP_002142180.1 197362543 complement(1515887..1516435) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1516435 554290001430 SSPA1341 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142180.1 1515887 R 554290 CDS YP_002142181.1 197362544 complement(1516453..1517202) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island lipoprotein; pathogenicity island lipoprotein 1517202 554290001431 SSPA1342 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island lipoprotein YP_002142181.1 1516453 R 554290 CDS YP_002142182.1 197362545 complement(1517199..1517447) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1517447 554290001432 SSPA1343 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142182.1 1517199 R 554290 CDS YP_002142183.1 197362546 complement(1517459..1517686) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1517686 554290001433 SSPA1344 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142183.1 1517459 R 554290 CDS YP_002142184.1 197362547 complement(1517727..1517942) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1517942 554290001434 SSPA1345 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142184.1 1517727 R 554290 CDS YP_002142185.1 197362548 complement(1518036..1518725) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein 1518725 554290001435 SSPA1346 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island effector protein YP_002142185.1 1518036 R 554290 CDS YP_002142186.1 197362549 complement(1518722..1519504) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein 1519504 554290001436 SSPA1347 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island effector protein YP_002142186.1 1518722 R 554290 CDS YP_002142187.1 197362550 complement(1519520..1519948) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1519948 554290001437 SSPA1348 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142187.1 1519520 R 554290 CDS YP_002142188.1 197362551 complement(1520006..1520422) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein 1520422 554290001438 SSPA1349 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island effector protein YP_002142188.1 1520006 R 554290 CDS YP_002142189.1 197362552 complement(1520425..1521012) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein 1521012 554290001439 SSPA1350 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island effector protein YP_002142189.1 1520425 R 554290 CDS YP_002142190.1 197362553 complement(1521028..1522482) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein 1522482 554290001440 SSPA1351 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island effector protein YP_002142190.1 1521028 R 554290 CDS YP_002142191.1 197362554 complement(1522485..1522958) 1 NC_011147.1 similar to Salmonella typhi CT18 Type III secretion system chaperone protein; type III secretion system chaperone protein 1522958 554290001441 SSPA1352 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III secretion system chaperone protein YP_002142191.1 1522485 R 554290 CDS YP_002142192.1 197362555 complement(1522955..1523545) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island effector effector protein; pathogenicity island effector protein 1523545 554290001442 SSPA1353 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island effector protein YP_002142192.1 1522955 R 554290 CDS YP_002142193.1 197362556 complement(1523552..1523878) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1523878 554290001443 SSPA1354 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142193.1 1523552 R 554290 CDS YP_002142194.1 197362557 complement(1524141..1524383) 1 NC_011147.1 similar to Salmonella typhi CT18 secretion system protein; secretion system protein 1524383 554290001444 SSPA1355 Salmonella enterica subsp. enterica serovar Paratyphi A str. secretion system protein YP_002142194.1 1524141 R 554290 CDS YP_002142195.1 197362558 complement(1524391..1525602) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1525602 554290001445 SSPA1356 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142195.1 1524391 R 554290 CDS YP_002142196.1 197362559 complement(1525583..1527076) 1 NC_011147.1 similar to Salmonella typhi Ty2 outer membrane secretory protein; outer membrane secretory protein 1527076 554290001446 SSPA1357 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane secretory protein YP_002142196.1 1525583 R 554290 CDS YP_002142197.1 197362560 complement(1527078..1527479) 1 NC_011147.1 similar to Salmonella typhi Ty2 pathogenicity island secreted effector protein; pathogenicity island secreted effector protein 1527479 554290001447 SSPA1358 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island secreted effector protein YP_002142197.1 1527078 R 554290 CDS YP_002142198.1 197362561 1527880..1530642 1 NC_011147.1 similar to Salmonella typhi CT18 two-component sensor kinase; two-component sensor kinase 1530642 554290001448 SSPA1359 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component sensor kinase YP_002142198.1 1527880 D 554290 CDS YP_002142199.1 197362562 1530673..1531311 1 NC_011147.1 similar to Salmonella typhi CT18 two-component response regulator; two-component response regulator 1531311 554290001449 SSPA1360 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component response regulator YP_002142199.1 1530673 D 554290 CDS YP_002142200.1 197362563 1531490..1532218 1 NC_011147.1 orf242; similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1532218 554290001450 SSPA1361 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002142200.1 1531490 D 554290 CDS YP_002142201.1 197362564 1532390..1533349 1 NC_011147.1 orf319; similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1533349 554290001451 SSPA1362 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island protein YP_002142201.1 1532390 D 554290 CDS YP_002142202.1 197362565 complement(1533445..1533657) 1 NC_011147.1 similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein 1533657 554290001452 SSPA1363 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142202.1 1533445 R 554290 CDS YP_002142203.1 197362566 complement(1533755..1534375) 1 NC_011147.1 similar to Salmonella typhi CT18 two-component response regulator; two-component response regulator 1534375 554290001453 SSPA1364 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component response regulator YP_002142203.1 1533755 R 554290 CDS YP_002142204.2 449784937 complement(1534350..1536128) 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 1536128 554290001454 SSPA1365 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142204.2 1534350 R 554290 CDS YP_002142205.1 197362568 1537046..1538068 1 NC_011147.1 similar to Salmonella typhi CT18 tetrathionate reductase subunit C (membrane protein); tetrathionate reductase subunit C 1538068 554290001456 SSPA1366 Salmonella enterica subsp. enterica serovar Paratyphi A str. tetrathionate reductase subunit C YP_002142205.1 1537046 D 554290 CDS YP_002142206.1 197362569 1538061..1541123 1 NC_011147.1 similar to Salmonella typhi CT18 tetrathionate reductase subunit A; tetrathionate reductase subunit A 1541123 554290001457 SSPA1367 Salmonella enterica subsp. enterica serovar Paratyphi A str. tetrathionate reductase subunit A YP_002142206.1 1538061 D 554290 CDS YP_002142207.1 197362570 1542684..1543466 1 NC_011147.1 orf245; similar to Salmonella typhi CT18 Orf 245 protein; hypothetical protein 1543466 554290001459 SSPA1368 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142207.1 1542684 D 554290 CDS YP_002142208.1 197362571 1543479..1544372 1 NC_011147.1 orf32; similar to Salmonella typhimurium hydrolase or acyltransferase; hydrolase/acyltransferase 1544372 554290001460 SSPA1369 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase/acyltransferase YP_002142208.1 1543479 D 554290 CDS YP_002142209.1 197362572 1544394..1545737 1 NC_011147.1 orf48; similar to Salmonella typhi CT18 amino acid permease; amino acid permease 1545737 554290001461 SSPA1370 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid permease YP_002142209.1 1544394 D 554290 CDS YP_002142210.1 197362573 1546193..1547551 1 NC_011147.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1547551 554290001462 SSPA1371 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate kinase YP_002142210.1 1546193 D 554290 CDS YP_002142211.1 197362574 1547862..1548098 1 NC_011147.1 similar to Salmonella typhi Ty2 major outer membrane lipoprotein; major outer membrane lipoprotein 1548098 554290001463 SSPA1372 Salmonella enterica subsp. enterica serovar Paratyphi A str. major outer membrane lipoprotein YP_002142211.1 1547862 D 554290 CDS YP_002142212.1 197362575 1548180..1548419 1 NC_011147.1 similar to Salmonella typhi CT18 major outer membrane lipoprotein; major outer membrane lipoprotein 1548419 554290001464 SSPA1373 Salmonella enterica subsp. enterica serovar Paratyphi A str. major outer membrane lipoprotein YP_002142212.1 1548180 D 554290 CDS YP_002142213.1 197362576 1548497..1548736 1 NC_011147.1 similar to Salmonella typhi CT18 major outer membrane lipoprotein; major outer membrane lipoprotein 1548736 554290001465 SSPA1374 Salmonella enterica subsp. enterica serovar Paratyphi A str. major outer membrane lipoprotein YP_002142213.1 1548497 D 554290 CDS YP_002142214.1 197362577 complement(1548802..1549803) 1 NC_011147.1 similar to Salmonella typhimurium LysM domain; LysM domain 1549803 554290001466 SSPA1375 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysM domain YP_002142214.1 1548802 R 554290 CDS YP_002142215.1 197362578 complement(1549958..1550374) 1 NC_011147.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE 1550374 554290001467 SSPA1376 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine desufuration protein SufE YP_002142215.1 1549958 R 554290 CDS YP_002142216.1 197362579 complement(1552849..1553595) 1 NC_011147.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase ATPase 1553595 sufC 554290001470 sufC Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine desulfurase ATPase YP_002142216.1 1552849 R 554290 CDS YP_002142217.1 197362580 complement(1553612..1555099) 1 NC_011147.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 1555099 554290001471 SSPA1378 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine desulfurase activator complex subunit SufB YP_002142217.1 1553612 R 554290 CDS YP_002142218.1 197362581 complement(1555108..1555476) 1 NC_011147.1 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein 1555476 sufA 554290001472 sufA Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-sulfur cluster assembly scaffold protein YP_002142218.1 1555108 R 554290 CDS YP_002142219.1 197362582 1555903..1557249 1 NC_011147.1 similar to Salmonella typhi CT18 transporter; transporter 1557249 554290001473 SSPA1380 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002142219.1 1555903 D 554290 CDS YP_002142220.1 197362583 complement(1557537..1557764) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1557764 554290001475 SSPA1381 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142220.1 1557537 R 554290 CDS YP_002142221.1 197362584 complement(1557824..1558177) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1558177 554290001476 SSPA1382 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142221.1 1557824 R 554290 CDS YP_002142222.1 197362585 complement(1558231..1561287) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical FAD-binding protein; hypothetical protein 1561287 554290001477 SSPA1383 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142222.1 1558231 R 554290 CDS YP_002142223.1 197362586 1561552..1562670 1 NC_011147.1 'YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function'; inner membrane protein 1562670 554290001478 SSPA1384 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142223.1 1561552 D 554290 CDS YP_002142224.1 197362587 1563064..1563780 1 NC_011147.1 catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 1563780 aroD 554290001480 aroD Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-dehydroquinate dehydratase YP_002142224.1 1563064 D 554290 CDS YP_002142225.1 197362588 complement(1563880..1566258) 1 NC_011147.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1566258 554290001481 SSPA1386 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoenolpyruvate synthase YP_002142225.1 1563880 R 554290 CDS YP_002142226.1 197362589 1566587..1567420 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1567420 554290001482 SSPA1387 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142226.1 1566587 D 554290 CDS YP_002142227.1 197362590 1567576..1568622 1 NC_011147.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 1568622 554290001483 SSPA1388 Salmonella enterica subsp. enterica serovar Paratyphi A str. phospho-2-dehydro-3-deoxyheptonate aldolase YP_002142227.1 1567576 D 554290 CDS YP_002142228.1 197362591 1568779..1568970 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1568970 554290001484 SSPA1389 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142228.1 1568779 D 554290 CDS YP_002142229.1 197362592 complement(1569006..1570448) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1570448 554290001485 SSPA1390 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142229.1 1569006 R 554290 CDS YP_002142230.1 197362593 complement(1570510..1571223) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1571223 554290001486 SSPA1391 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142230.1 1570510 R 554290 CDS YP_002142231.1 197362594 complement(1571537..1572001) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1572001 554290001487 SSPA1392 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142231.1 1571537 R 554290 CDS YP_002142232.1 197362595 complement(1572078..1572827) 1 NC_011147.1 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase 1572827 554290001488 SSPA1393 Salmonella enterica subsp. enterica serovar Paratyphi A str. vitamin B12-transporter ATPase YP_002142232.1 1572078 R 554290 CDS YP_002142233.1 197362596 complement(1572827..1573378) 1 NC_011147.1 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase 1573378 btuE 554290001489 btuE Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione peroxidase YP_002142233.1 1572827 R 554290 CDS YP_002142234.1 197362597 complement(1573470..1574450) 1 NC_011147.1 with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 1574450 554290001490 SSPA1395 Salmonella enterica subsp. enterica serovar Paratyphi A str. vtamin B12-transporter permease YP_002142234.1 1573470 R 554290 CDS YP_002142235.1 197362598 complement(1574653..1574952) 1 NC_011147.1 'This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control'; integration host factor subunit alpha 1574952 ihfA 554290001491 ihfA Salmonella enterica subsp. enterica serovar Paratyphi A str. integration host factor subunit alpha YP_002142235.1 1574653 R 554290 CDS YP_002142236.1 197362599 complement(1574957..1577344) 1 NC_011147.1 'catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily'; phenylalanyl-tRNA synthetase subunit beta 1577344 pheT 554290001492 pheT Salmonella enterica subsp. enterica serovar Paratyphi A str. phenylalanyl-tRNA synthetase subunit beta YP_002142236.1 1574957 R 554290 CDS YP_002142237.1 197362600 complement(1577360..1578343) 1 NC_011147.1 'catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily'; phenylalanyl-tRNA synthetase subunit alpha 1578343 pheS 554290001493 pheS Salmonella enterica subsp. enterica serovar Paratyphi A str. phenylalanyl-tRNA synthetase subunit alpha YP_002142237.1 1577360 R 554290 CDS YP_002142238.1 197362601 complement(1578645..1579001) 1 NC_011147.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1579001 rplT 554290001494 rplT Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L20 YP_002142238.1 1578645 R 554290 CDS YP_002142239.1 197362602 1579121..1579291 1 NC_011147.1 50S ribosomal protein A 1579291 554290001495 SSPA1400 Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein A YP_002142239.1 1579121 D 554290 CDS YP_002142240.1 197362603 complement(1579345..1579779) 1 NC_011147.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 1579779 infC 554290001496 infC Salmonella enterica subsp. enterica serovar Paratyphi A str. translation initiation factor IF-3 YP_002142240.1 1579345 R 554290 CDS YP_002142241.1 197362604 complement(1579891..1581819) 1 NC_011147.1 'catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; threonyl-tRNA synthetase 1581819 554290001497 SSPA1402 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonyl-tRNA synthetase YP_002142241.1 1579891 R 554290 CDS YP_002142242.1 197362605 1582711..1583934 1 NC_011147.1 similar to Salmonella typhi CT18 O-antigen polymerase; O-antigen polymerase 1583934 554290001498 SSPA1403 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-antigen polymerase YP_002142242.1 1582711 D 554290 CDS YP_002142243.1 197362606 complement(1584257..1584463) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1584463 554290001499 SSPA1404 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142243.1 1584257 R 554290 CDS YP_002142244.1 197362607 complement(1584636..1585490) 1 NC_011147.1 similar to Salmonella typhimurium DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 1585490 554290001500 SSPA1405 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA/RNA non-specific endonuclease YP_002142244.1 1584636 R 554290 CDS YP_002142245.1 197362608 complement(1585487..1585801) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1585801 554290001501 SSPA1406 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142245.1 1585487 R 554290 CDS YP_002142246.1 197362609 1585971..1586903 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 1586903 554290001502 SSPA1407 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142246.1 1585971 D 554290 CDS YP_002142247.1 197362610 complement(1586952..1587710) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 1587710 554290001503 SSPA1408 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142247.1 1586952 R 554290 CDS YP_002142248.1 197362611 1587999..1588931 1 NC_011147.1 similar to Salmonella typhi CT18 6-phosphofructokinase isozyme; 6-phosphofructokinase 1588931 554290001504 SSPA1409 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-phosphofructokinase YP_002142248.1 1587999 D 554290 CDS YP_002142249.1 197362612 1589028..1589318 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1589318 554290001505 SSPA1410 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142249.1 1589028 D 554290 CDS YP_002142250.1 197362613 1589425..1590285 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1590285 554290001506 SSPA1411 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142250.1 1589425 D 554290 CDS YP_002142251.1 197362614 complement(1590328..1590864) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1590864 554290001507 SSPA1412 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142251.1 1590328 R 554290 CDS YP_002142252.1 197362615 1591013..1591681 1 NC_011147.1 'YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate'; 2-deoxyglucose-6-phosphatase 1591681 554290001508 SSPA1413 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-deoxyglucose-6-phosphatase YP_002142252.1 1591013 D 554290 CDS YP_002142253.1 197362616 1591831..1592418 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1592418 554290001509 SSPA1414 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142253.1 1591831 D 554290 CDS YP_002142254.1 197362617 1592555..1593946 1 NC_011147.1 similar to Salmonella typhi CT18 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1593946 554290001510 SSPA1415 Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium:dicarboxylate symporter YP_002142254.1 1592555 D 554290 CDS YP_002142255.1 197362618 complement(1594049..1594291) 1 NC_011147.1 similar to Salmonella typhi CT18 cell division activator CedA; cell division modulator 1594291 554290001511 SSPA1416 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division modulator YP_002142255.1 1594049 R 554290 CDS YP_002142256.1 197362619 1594656..1596908 1 NC_011147.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II 1596908 katE 554290001512 katE Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroperoxidase II YP_002142256.1 1594656 D 554290 CDS YP_002142257.1 197362620 complement(1596952..1597710) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1597710 554290001513 SSPA1418 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142257.1 1596952 R 554290 CDS YP_002142258.1 197362621 complement(1597723..1599078) 1 NC_011147.1 similar to Salmonella typhi CT18 phospho-beta-glucosidase B; phospho-beta-glucosidase B 1599078 554290001514 SSPA1419 Salmonella enterica subsp. enterica serovar Paratyphi A str. phospho-beta-glucosidase B YP_002142258.1 1597723 R 554290 CDS YP_002142259.2 449784938 complement(1599203..1600045) 1 NC_011147.1 represses the celABCDF-ydjC operon involved in carbon uptake; DNA-binding transcriptional regulator ChbR 1600045 554290001515 SSPA1420 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator ChbR YP_002142259.2 1599203 R 554290 CDS YP_002142260.1 197362623 complement(1600055..1600402) 1 NC_011147.1 'catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake'; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA 1600402 554290001516 SSPA1421 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA YP_002142260.1 1600055 R 554290 CDS YP_002142261.1 197362624 complement(1600453..1601811) 1 NC_011147.1 'catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake'; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC 1601811 554290001517 SSPA1422 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC YP_002142261.1 1600453 R 554290 CDS YP_002142262.1 197362625 complement(1601894..1602214) 1 NC_011147.1 'catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake'; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB 1602214 554290001518 SSPA1423 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB YP_002142262.1 1601894 R 554290 CDS YP_002142263.1 197362626 complement(1602515..1602856) 1 NC_011147.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE 1602856 554290001519 SSPA1424 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator OsmE YP_002142263.1 1602515 R 554290 CDS YP_002142264.1 197362627 1603075..1603902 1 NC_011147.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1603902 nadE 554290001520 nadE Salmonella enterica subsp. enterica serovar Paratyphi A str. NAD synthetase YP_002142264.1 1603075 D 554290 CDS YP_002142265.1 197362628 1604023..1604904 1 NC_011147.1 3' incision activity; acts with UvrC; nucleotide excision repair endonuclease 1604904 554290001521 SSPA1426 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleotide excision repair endonuclease YP_002142265.1 1604023 D 554290 CDS YP_002142266.1 197362629 complement(1604979..1605464) 1 NC_011147.1 periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; hypothetical protein 1605464 554290001522 SSPA1427 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142266.1 1604979 R 554290 CDS YP_002142267.1 197362630 complement(1605800..1606768) 1 NC_011147.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 1606768 554290001523 SSPA1428 Salmonella enterica subsp. enterica serovar Paratyphi A str. succinylglutamate desuccinylase YP_002142267.1 1605800 R 554290 CDS YP_002142268.1 197362631 complement(1606761..1608104) 1 NC_011147.1 'catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation'; succinylarginine dihydrolase 1608104 554290001524 SSPA1429 Salmonella enterica subsp. enterica serovar Paratyphi A str. succinylarginine dihydrolase YP_002142268.1 1606761 R 554290 CDS YP_002142269.1 197362632 complement(1608101..1609579) 1 NC_011147.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 1609579 astD 554290001525 astD Salmonella enterica subsp. enterica serovar Paratyphi A str. succinylglutamic semialdehyde dehydrogenase YP_002142269.1 1608101 R 554290 CDS YP_002142270.1 197362633 complement(1609576..1610610) 1 NC_011147.1 similar to Salmonella typhimurium arginine succinyltransferase; arginine succinyltransferase 1610610 554290001526 SSPA1431 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine succinyltransferase YP_002142270.1 1609576 R 554290 CDS YP_002142271.1 197362634 complement(1610601..1611827) 1 NC_011147.1 catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; bifunctional succinylornithine transaminase/acetylornithine transaminase 1611827 554290001527 SSPA1432 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional succinylornithine transaminase/acetylornithine transaminase YP_002142271.1 1610601 R 554290 CDS YP_002142272.1 197362635 1612273..1613079 1 NC_011147.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 1613079 554290001528 SSPA1433 Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease III YP_002142272.1 1612273 D 554290 CDS YP_002142273.1 197362636 1613152..1613568 1 NC_011147.1 similar to Salmonella typhi CT18 MutT-family protein; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1613568 554290001529 SSPA1434 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_002142273.1 1613152 D 554290 CDS YP_002142274.1 197362637 complement(1613528..1613803) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1613803 554290001530 SSPA1435 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142274.1 1613528 R 554290 CDS YP_002142275.1 197362638 1614042..1615385 1 NC_011147.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1615385 554290001531 SSPA1436 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate dehydrogenase YP_002142275.1 1614042 D 554290 CDS YP_002142276.1 197362639 complement(1615415..1617364) 1 NC_011147.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 1617364 554290001532 SSPA1437 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA topoisomerase III YP_002142276.1 1615415 R 554290 CDS YP_002142277.1 197362640 complement(1617369..1618412) 1 NC_011147.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 1618412 554290001533 SSPA1438 Salmonella enterica subsp. enterica serovar Paratyphi A str. selenophosphate synthetase YP_002142277.1 1617369 R 554290 CDS YP_002142278.1 197362641 complement(1618530..1619081) 1 NC_011147.1 similar to Salmonella typhi CT18 nitroreductase; hypothetical protein 1619081 554290001534 SSPA1439 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142278.1 1618530 R 554290 CDS YP_002142279.1 197362642 1619255..1621111 1 NC_011147.1 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 1621111 554290001535 SSPA1440 Salmonella enterica subsp. enterica serovar Paratyphi A str. protease 4 YP_002142279.1 1619255 D 554290 CDS YP_002142280.1 197362643 1621207..1622223 1 NC_011147.1 converts asparagine to aspartate and ammonia; asparaginase 1622223 ansA 554290001536 ansA Salmonella enterica subsp. enterica serovar Paratyphi A str. asparaginase YP_002142280.1 1621207 D 554290 CDS YP_002142281.1 197362644 1622250..1622906 1 NC_011147.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 1622906 554290001537 SSPA1442 Salmonella enterica subsp. enterica serovar Paratyphi A str. nicotinamidase/pyrazinamidase YP_002142281.1 1622250 D 554290 CDS YP_002142282.1 197362645 complement(1623257..1623535) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1623535 554290001538 SSPA1443 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142282.1 1623257 R 554290 CDS YP_002142283.1 197362646 complement(1623577..1624005) 1 NC_011147.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1624005 554290001539 SSPA1444 Salmonella enterica subsp. enterica serovar Paratyphi A str. methionine sulfoxide reductase B YP_002142283.1 1623577 R 554290 CDS YP_002142284.1 197362647 1624332..1625327 1 NC_011147.1 similar to Salmonella typhi CT18 glyceraldehyde 3-phosphate dehydrogenase A; glyceraldehyde 3-phosphate dehydrogenase A 1625327 554290001540 SSPA1445 Salmonella enterica subsp. enterica serovar Paratyphi A str. glyceraldehyde 3-phosphate dehydrogenase A YP_002142284.1 1624332 D 554290 CDS YP_002142285.1 197362648 1625656..1626540 1 NC_011147.1 similar to Salmonella typhimurium enzymes related to aldose 1-epimerase; hypothetical protein 1626540 554290001541 SSPA1446 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142285.1 1625656 D 554290 CDS YP_002142286.1 197362649 complement(1627593..1628789) 1 NC_011147.1 similar to Salmonella typhimurium arylsulfatase regulator; arylsulfatase regulator 1628789 554290001543 SSPA1448 Salmonella enterica subsp. enterica serovar Paratyphi A str. arylsulfatase regulator YP_002142286.1 1627593 R 554290 CDS YP_002142287.1 197362650 complement(1629079..1629825) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 1629825 554290001544 SSPA1449 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142287.1 1629079 R 554290 CDS YP_002142288.1 197362651 1630251..1632185 1 NC_011147.1 Pseudogene in Paratyphi A strain ATCC9150 (SPA1559); hypothetical protein 1632185 554290001545 SSPA1449a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142288.1 1630251 D 554290 CDS YP_002142289.1 197362652 1632308..1633594 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1633594 554290001546 SSPA1450 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142289.1 1632308 D 554290 CDS YP_002142290.1 197362653 1634265..1635758 1 NC_011147.1 similar to Salmonella typhimurium Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1; hypothetical protein 1635758 554290001547 SSPA1451 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142290.1 1634265 D 554290 CDS YP_002142291.1 197362654 1635799..1636326 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1636326 554290001548 SSPA1452 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142291.1 1635799 D 554290 CDS YP_002142292.1 197362655 1636636..1637082 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1637082 554290001549 SSPA1453 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142292.1 1636636 D 554290 CDS YP_002142293.1 197362656 complement(1637062..1637856) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1637856 554290001550 SSPA1454 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002142293.1 1637062 R 554290 CDS YP_002142294.1 197362657 1637957..1639141 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1639141 554290001551 SSPA1455 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142294.1 1637957 D 554290 CDS YP_002142295.1 197362658 1639260..1639607 1 NC_011147.1 similar to Salmonella typhi CT18 bacteriophage protein; bacteriophage protein 1639607 554290001552 SSPA1456 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriophage protein YP_002142295.1 1639260 D 554290 CDS YP_002142296.1 197362659 complement(1639593..1639904) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1639904 554290001553 SSPA1457 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142296.1 1639593 R 554290 CDS YP_002142297.1 197362660 complement(1639973..1640224) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1640224 554290001554 SSPA1458 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142297.1 1639973 R 554290 CDS YP_002142298.1 197362661 complement(1640657..1640905) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1640905 554290001555 SSPA1459 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142298.1 1640657 R 554290 CDS YP_002142299.1 197362662 complement(1640913..1641098) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1641098 554290001556 SSPA1460 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142299.1 1640913 R 554290 CDS YP_002142300.1 197362663 complement(1641219..1641860) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1641860 554290001558 SSPA1461 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142300.1 1641219 R 554290 CDS YP_002142301.1 197362664 complement(1642090..1642272) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1642272 554290001559 SSPA1462 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142301.1 1642090 R 554290 CDS YP_002142302.1 197362665 complement(1642275..1642637) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1642637 554290001560 SSPA1463 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142302.1 1642275 R 554290 CDS YP_002142303.1 197362666 complement(1642811..1643449) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; leucine export protein LeuE 1643449 554290001561 SSPA1464 Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine export protein LeuE YP_002142303.1 1642811 R 554290 CDS YP_002142304.1 197362667 complement(1643646..1644191) 1 NC_011147.1 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 1644191 554290001562 SSPA1465 Salmonella enterica subsp. enterica serovar Paratyphi A str. chorismate mutase YP_002142304.1 1643646 R 554290 CDS YP_002142305.1 197362668 1644274..1644429 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1644429 554290001563 SSPA1466 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142305.1 1644274 D 554290 CDS YP_002142306.1 197362669 1644508..1644756 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1644756 554290001564 SSPA1467 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142306.1 1644508 D 554290 CDS YP_002142307.1 197362670 complement(1645011..1645859) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1645859 554290001565 SSPA1468 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002142307.1 1645011 R 554290 CDS YP_002142308.1 197362671 complement(1645928..1646521) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1646521 554290001566 SSPA1469 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142308.1 1645928 R 554290 CDS YP_002142309.1 197362672 complement(1646666..1647454) 1 NC_011147.1 streptomycin 3'-adenyltransferase; aminoglycoside resistance protein 1647454 554290001567 SSPA1470 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminoglycoside resistance protein YP_002142309.1 1646666 R 554290 CDS YP_002142310.1 197362673 complement(1647563..1648213) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1648213 554290001568 SSPA1471 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142310.1 1647563 R 554290 CDS YP_002142311.1 197362674 complement(1648407..1648733) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1648733 554290001570 SSPA1472 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142311.1 1648407 R 554290 CDS YP_002142312.1 197362675 1648927..1650060 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1650060 554290001571 SSPA1473 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142312.1 1648927 D 554290 CDS YP_002142313.1 197362676 complement(1650142..1650732) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transport ATP-binding subunit; ABC transporter ATP-binding protein 1650732 554290001572 SSPA1474 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142313.1 1650142 R 554290 CDS YP_002142314.1 197362677 complement(1650726..1651523) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transport ATP-binding protein; ABC transporter ATP-binding protein 1651523 554290001573 SSPA1475 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142314.1 1650726 R 554290 CDS YP_002142315.1 197362678 complement(1651517..1652329) 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane transport protein; inner membrane transport protein 1652329 554290001574 SSPA1476 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane transport protein YP_002142315.1 1651517 R 554290 CDS YP_002142316.1 197362679 complement(1652319..1653296) 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane transport protein; inner membrane transport protein 1653296 554290001575 SSPA1477 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane transport protein YP_002142316.1 1652319 R 554290 CDS YP_002142317.1 197362680 complement(1653293..1654927) 1 NC_011147.1 similar to Salmonella typhi CT18 substrate-binding transport protein; substrate-binding transport protein 1654927 554290001576 SSPA1478 Salmonella enterica subsp. enterica serovar Paratyphi A str. substrate-binding transport protein YP_002142317.1 1653293 R 554290 CDS YP_002142318.1 197362681 1655609..1655923 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1655923 554290001577 SSPA1479 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142318.1 1655609 D 554290 CDS YP_002142319.1 197362682 1656072..1656602 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome; cytochrome 1656602 554290001578 SSPA1480 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome YP_002142319.1 1656072 D 554290 CDS YP_002142320.1 197362683 complement(1656684..1657601) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1657601 554290001579 SSPA1481 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142320.1 1656684 R 554290 CDS YP_002142321.1 197362684 complement(1658134..1658307) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1658307 554290001581 SSPA1482 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142321.1 1658134 R 554290 CDS YP_002142322.2 449784939 complement(1659026..1659583) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane invasion protein; outer membrane invasion protein 1659583 554290001584 SSPA1483 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane invasion protein YP_002142322.2 1659026 R 554290 CDS YP_002142323.1 197362686 complement(1659961..1660089) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1660089 554290001585 SSPA1484 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142323.1 1659961 R 554290 CDS YP_002142324.1 197362687 complement(1660175..1660339) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1660339 554290001586 SSPA1485 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142324.1 1660175 R 554290 CDS YP_002142325.1 197362688 1660388..1660651 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane virulence protein; outer membrane virulence protein 1660651 554290001587 SSPA1486 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane virulence protein YP_002142325.1 1660388 D 554290 CDS YP_002142326.1 197362689 1660783..1660995 1 NC_011147.1 similar to Salmonella typhi CT18 cold shock protein; cold shock protein 1660995 554290001588 SSPA1487 Salmonella enterica subsp. enterica serovar Paratyphi A str. cold shock protein YP_002142326.1 1660783 D 554290 CDS YP_002142327.1 197362690 1661397..1661918 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1661918 554290001589 SSPA1488 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142327.1 1661397 D 554290 CDS YP_002142328.1 197362691 1662099..1662338 1 NC_011147.1 similar to Salmonella typhi CT18 virulence protein; virulence protein 1662338 554290001590 SSPA1489 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence protein YP_002142328.1 1662099 D 554290 CDS YP_002142329.1 197362692 1663212..1664021 1 NC_011147.1 similar to Salmonella typhi Ty2 toxin-like protein; toxin-like protein 1664021 554290001592 SSPA1490 Salmonella enterica subsp. enterica serovar Paratyphi A str. toxin-like protein YP_002142329.1 1663212 D 554290 CDS YP_002142330.1 197362693 1664094..1664471 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1664471 554290001593 SSPA1491 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142330.1 1664094 D 554290 CDS YP_002142331.1 197362694 complement(1664619..1665161) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1665161 554290001594 SSPA1492 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142331.1 1664619 R 554290 CDS YP_002142332.1 197362695 complement(1665353..1666081) 1 NC_011147.1 similar to Salmonella typhi CT18 pertussis-like toxin subunit; pertussis-like toxin subunit 1666081 554290001595 SSPA1493 Salmonella enterica subsp. enterica serovar Paratyphi A str. pertussis-like toxin subunit YP_002142332.1 1665353 R 554290 CDS YP_002142333.1 197362696 complement(1666098..1666511) 1 NC_011147.1 similar to Salmonella typhi CT18 pertussis-like toxin subunit; pertussis-like toxin subunit 1666511 554290001596 SSPA1494 Salmonella enterica subsp. enterica serovar Paratyphi A str. pertussis-like toxin subunit YP_002142333.1 1666098 R 554290 CDS YP_002142334.1 197362697 1667154..1667426 1 NC_011147.1 hypothetical protein 1667426 554290001597 SSPA1495 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142334.1 1667154 D 554290 CDS YP_002142335.1 197362698 complement(1667458..1668582) 1 NC_011147.1 similar to Salmonella typhi CT18 bacteriophage protein; bacteriophage protein 1668582 554290001598 SSPA1496 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriophage protein YP_002142335.1 1667458 R 554290 CDS YP_002142336.1 197362699 complement(1669041..1670291) 1 NC_011147.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1670291 554290001599 SSPA1497 Salmonella enterica subsp. enterica serovar Paratyphi A str. isocitrate dehydrogenase YP_002142336.1 1669041 R 554290 CDS YP_002142337.1 197362700 1670463..1671128 1 NC_011147.1 similar to Salmonella typhi Ty2 ribosomal large subunit pseudouridine synthase B; ribosomal large subunit pseudouridine synthase B 1671128 554290001600 SSPA1498 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosomal large subunit pseudouridine synthase B YP_002142337.1 1670463 D 554290 CDS YP_002142338.1 197362701 1671125..1671454 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1671454 554290001601 SSPA1499 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142338.1 1671125 D 554290 CDS YP_002142339.1 197362702 1671466..1671927 1 NC_011147.1 similar to Salmonella typhi Ty2 MutT-family protein; MutT-family protein 1671927 554290001602 SSPA1500 Salmonella enterica subsp. enterica serovar Paratyphi A str. MutT-family protein YP_002142339.1 1671466 D 554290 CDS YP_002142340.1 197362703 1671981..1673087 1 NC_011147.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1673087 mnmA 554290001603 mnmA Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA-specific 2-thiouridylase MnmA YP_002142340.1 1671981 D 554290 CDS YP_002142341.1 197362704 1673174..1673815 1 NC_011147.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 1673815 554290001604 SSPA1502 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142341.1 1673174 D 554290 CDS YP_002142342.1 197362705 1673819..1675189 1 NC_011147.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1675189 554290001605 SSPA1503 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenylosuccinate lyase YP_002142342.1 1673819 D 554290 CDS YP_002142343.1 197362706 1675313..1675987 1 NC_011147.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 1675987 554290001606 SSPA1504 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator PhoP YP_002142343.1 1675313 D 554290 CDS YP_002142344.1 197362707 1675987..1677450 1 NC_011147.1 'similar to Salmonella typhi CT18 sensor protein PhoQ, regulator of virulence determinants'; sensor protein PhoQ 1677450 554290001607 SSPA1505 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor protein PhoQ YP_002142344.1 1675987 D 554290 CDS YP_002142345.1 197362708 1677531..1678652 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1678652 554290001608 SSPA1506 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142345.1 1677531 D 554290 CDS YP_002142346.1 197362709 complement(1678692..1680026) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1680026 554290001609 SSPA1507 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142346.1 1678692 R 554290 CDS YP_002142347.1 197362710 complement(1680030..1681259) 1 NC_011147.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1681259 554290001610 SSPA1508 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidase T YP_002142347.1 1680030 R 554290 CDS YP_002142348.1 197362711 1681510..1682646 1 NC_011147.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase 1682646 potA 554290001611 potA Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine/spermidine ABC transporter ATPase YP_002142348.1 1681510 D 554290 CDS YP_002142349.1 197362712 1682630..1683493 1 NC_011147.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter permease 1683493 potB 554290001612 potB Salmonella enterica subsp. enterica serovar Paratyphi A str. spermidine/putrescine ABC transporter permease YP_002142349.1 1682630 D 554290 CDS YP_002142350.1 197362713 1683822..1684832 1 NC_011147.1 translocated by the type III secretion system SPI-2; required for the formation of lysosomal glycoprotein structures (Sifs); required for maintenance of membrane in the Salmonella-containing vacuole; a cysteine residue with CAAX motif is modified by isoprenoid addition of protein geranylgeranyl transferase I; also modified by S-acylation; secreted effector protein 1684832 sifA 554290001613 sifA Salmonella enterica subsp. enterica serovar Paratyphi A str. secreted effector protein YP_002142350.1 1683822 D 554290 CDS YP_002142351.1 197362714 1685148..1685927 1 NC_011147.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter permease 1685927 potC 554290001614 potC Salmonella enterica subsp. enterica serovar Paratyphi A str. spermidine/putrescine ABC transporter permease YP_002142351.1 1685148 D 554290 CDS YP_002142352.1 197362715 1685952..1686998 1 NC_011147.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; spermidine/putrescine ABC transporter substrate-binding protein 1686998 potD 554290001615 potD Salmonella enterica subsp. enterica serovar Paratyphi A str. spermidine/putrescine ABC transporter substrate-binding protein YP_002142352.1 1685952 D 554290 CDS YP_002142353.1 197362716 complement(1687080..1687793) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1687793 554290001616 SSPA1514 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002142353.1 1687080 R 554290 CDS YP_002142354.1 197362717 complement(1687918..1688829) 1 NC_011147.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase 1688829 554290001617 SSPA1515 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetyl-D-glucosamine kinase YP_002142354.1 1687918 R 554290 CDS YP_002142355.1 197362718 complement(1688858..1690102) 1 NC_011147.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 1690102 554290001618 SSPA1516 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane-specific lipoprotein transporter subunit LolE YP_002142355.1 1688858 R 554290 CDS YP_002142356.1 197362719 complement(1690102..1690803) 1 NC_011147.1 'outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone'; lipoprotein transporter ATP-binding subunit 1690803 lolD 554290001619 lolD Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein transporter ATP-binding subunit YP_002142356.1 1690102 R 554290 CDS YP_002142357.1 197362720 complement(1690796..1692106) 1 NC_011147.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 1692106 554290001620 SSPA1518 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane-specific lipoprotein transporter subunit LolC YP_002142357.1 1690796 R 554290 CDS YP_002142358.1 197362721 1692333..1695779 1 NC_011147.1 similar to Salmonella typhi CT18 transcription-repair coupling factor (TrcF); transcription-repair coupling factor 1695779 554290001621 SSPA1519 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription-repair coupling factor YP_002142358.1 1692333 D 554290 CDS YP_002142359.1 197362722 1695927..1696892 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1696892 554290001622 SSPA1520 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142359.1 1695927 D 554290 CDS YP_002142360.1 197362723 complement(1697021..1697479) 1 NC_011147.1 similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase 1697479 554290001623 SSPA1521 Salmonella enterica subsp. enterica serovar Paratyphi A str. insertion sequence element IS200 transposase YP_002142360.1 1697021 R 554290 CDS YP_002142361.1 197362724 complement(1697690..1697947) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1697947 554290001624 SSPA1522 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142361.1 1697690 R 554290 CDS YP_002142362.1 197362725 1698189..1698824 1 NC_011147.1 similar to Salmonella typhi CT18 TetR-family regulatory protein; TetR family regulatory protein 1698824 554290001625 SSPA1523 Salmonella enterica subsp. enterica serovar Paratyphi A str. TetR family regulatory protein YP_002142362.1 1698189 D 554290 CDS YP_002142363.2 449784940 complement(1698899..1699438) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1699438 554290001626 SSPA1524 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142363.2 1698899 R 554290 CDS YP_002142364.1 197362727 complement(1699617..1700864) 1 NC_011147.1 similar to Salmonella typhi CT18 NADH dehydrogenase; NADH dehydrogenase 1700864 554290001627 SSPA1525 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH dehydrogenase YP_002142364.1 1699617 R 554290 CDS YP_002142365.1 197362728 complement(1701175..1701717) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1701717 554290001628 SSPA1526 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142365.1 1701175 R 554290 CDS YP_002142366.1 197362729 complement(1701742..1702755) 1 NC_011147.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1702755 554290001629 SSPA1527 Salmonella enterica subsp. enterica serovar Paratyphi A str. beta-hexosaminidase YP_002142366.1 1701742 R 554290 CDS YP_002142367.1 197362730 complement(1702778..1703602) 1 NC_011147.1 catalyzes the phosphorylation of thiamine to thiamine phosphate; thiamine kinase 1703602 thiK 554290001630 thiK Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine kinase YP_002142367.1 1702778 R 554290 CDS YP_002142368.1 197362731 complement(1703583..1704221) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1704221 554290001631 SSPA1529 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142368.1 1703583 R 554290 CDS YP_002142369.1 197362732 complement(1704235..1704609) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1704609 554290001632 SSPA1530 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142369.1 1704235 R 554290 CDS YP_002142370.1 197362733 complement(1704612..1704971) 1 NC_011147.1 similar to Salmonella typhi CT18 protein kinase C inhibitor; purine nucleoside phosphoramidase 1704971 554290001633 SSPA1531 Salmonella enterica subsp. enterica serovar Paratyphi A str. purine nucleoside phosphoramidase YP_002142370.1 1704612 R 554290 CDS YP_002142371.1 197362734 complement(1707572..1709005) 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC 1709005 554290001635 SSPA1532 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system glucose-specific transporter subunit IIBC YP_002142371.1 1707572 R 554290 CDS YP_002142372.1 197362735 complement(1709300..1710097) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; metallodependent hydrolase 1710097 554290001636 SSPA1533 Salmonella enterica subsp. enterica serovar Paratyphi A str. metallodependent hydrolase YP_002142372.1 1709300 R 554290 CDS YP_002142373.1 197362736 complement(1710108..1711112) 1 NC_011147.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1711112 554290001637 SSPA1534 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit delta' YP_002142373.1 1710108 R 554290 CDS YP_002142374.1 197362737 complement(1711109..1711750) 1 NC_011147.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1711750 tmk 554290001638 tmk Salmonella enterica subsp. enterica serovar Paratyphi A str. thymidylate kinase YP_002142374.1 1711109 R 554290 CDS YP_002142375.2 449784941 complement(1711740..1712762) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1712762 554290001639 SSPA1536 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142375.2 1711740 R 554290 CDS YP_002142376.1 197362739 complement(1712765..1713574) 1 NC_011147.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 1713574 554290001640 SSPA1537 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-amino-4-deoxychorismate lyase YP_002142376.1 1712765 R 554290 CDS YP_002142377.1 197362740 complement(1713698..1714903) 1 NC_011147.1 'FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP'; 3-oxoacyl-(acyl carrier protein) synthase II 1714903 554290001641 SSPA1538 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-oxoacyl-(acyl carrier protein) synthase II YP_002142377.1 1713698 R 554290 CDS YP_002142378.1 197362741 complement(1715025..1715261) 1 NC_011147.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1715261 acpP 554290001642 acpP Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl carrier protein YP_002142378.1 1715025 R 554290 CDS YP_002142379.1 197362742 complement(1715417..1716151) 1 NC_011147.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1716151 fabG 554290001643 fabG Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-ketoacyl-ACP reductase YP_002142379.1 1715417 R 554290 CDS YP_002142380.1 197362743 complement(1716164..1717093) 1 NC_011147.1 similar to Salmonella typhi CT18 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1717093 554290001644 SSPA1541 Salmonella enterica subsp. enterica serovar Paratyphi A str. malonyl CoA-acyl carrier protein transacylase YP_002142380.1 1716164 R 554290 CDS YP_002142381.1 197362744 complement(1717109..1718062) 1 NC_011147.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1718062 554290001645 SSPA1542 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-oxoacyl-ACP synthase YP_002142381.1 1717109 R 554290 CDS YP_002142382.1 197362745 complement(1718142..1719191) 1 NC_011147.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1719191 554290001646 SSPA1543 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate acyltransferase PlsX YP_002142382.1 1718142 R 554290 CDS YP_002142383.1 197362746 complement(1719355..1719528) 1 NC_011147.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1719528 rpmF 554290001647 rpmF Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L32 YP_002142383.1 1719355 R 554290 CDS YP_002142384.1 197362747 complement(1719580..1720101) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1720101 554290001648 SSPA1545 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142384.1 1719580 R 554290 CDS YP_002142385.1 197362748 1720299..1720883 1 NC_011147.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1720883 554290001650 SSPA1546 Salmonella enterica subsp. enterica serovar Paratyphi A str. Maf-like protein YP_002142385.1 1720299 D 554290 CDS YP_002142386.1 197362749 complement(1720966..1721925) 1 NC_011147.1 'catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA'; 23S rRNA pseudouridylate synthase C 1721925 554290001651 SSPA1547 Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA pseudouridylate synthase C YP_002142386.1 1720966 R 554290 CDS YP_002142387.1 197362750 complement(1722115..1722363) 1 NC_011147.1 hypothetical protein 1722363 554290001652 SSPA1547a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142387.1 1722115 R 554290 CDS YP_002142388.1 197362751 1722499..1725702 1 NC_011147.1 'bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase'; ribonuclease E 1725702 rne 554290001653 rne Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease E YP_002142388.1 1722499 D 554290 CDS YP_002142389.1 197362752 complement(1725961..1726914) 1 NC_011147.1 'with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes'; flagellar hook-associated protein FlgL 1726914 flgL 554290001654 flgL Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar hook-associated protein FlgL YP_002142389.1 1725961 R 554290 CDS YP_002142390.1 197362753 complement(1726929..1728590) 1 NC_011147.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1728590 flgK 554290001655 flgK Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar hook-associated protein FlgK YP_002142390.1 1726929 R 554290 CDS YP_002142391.1 197362754 complement(1728655..1729605) 1 NC_011147.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 1729605 flgJ 554290001656 flgJ Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar rod assembly protein/muramidase FlgJ YP_002142391.1 1728655 R 554290 CDS YP_002142392.1 197362755 complement(1729605..1730702) 1 NC_011147.1 'part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum'; flagellar basal body P-ring protein 1730702 flgI 554290001657 flgI Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body P-ring protein YP_002142392.1 1729605 R 554290 CDS YP_002142393.1 197362756 complement(1730714..1731412) 1 NC_011147.1 'part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod'; flagellar basal body L-ring protein 1731412 flgH 554290001658 flgH Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body L-ring protein YP_002142393.1 1730714 R 554290 CDS YP_002142394.1 197362757 complement(1731467..1732249) 1 NC_011147.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1732249 flgG 554290001659 flgG Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body rod protein FlgG YP_002142394.1 1731467 R 554290 CDS YP_002142395.1 197362758 complement(1732263..1733018) 1 NC_011147.1 'FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod'; flagellar basal body rod protein FlgF 1733018 flgF 554290001660 flgF Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body rod protein FlgF YP_002142395.1 1732263 R 554290 CDS YP_002142396.1 197362759 complement(1733039..1734250) 1 NC_011147.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1734250 flgE 554290001661 flgE Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar hook protein FlgE YP_002142396.1 1733039 R 554290 CDS YP_002142397.1 197362760 complement(1734277..1734975) 1 NC_011147.1 'acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production'; flagellar basal body rod modification protein 1734975 flgD 554290001662 flgD Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body rod modification protein YP_002142397.1 1734277 R 554290 CDS YP_002142398.1 197362761 complement(1734987..1735391) 1 NC_011147.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1735391 flgC 554290001663 flgC Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body rod protein FlgC YP_002142398.1 1734987 R 554290 CDS YP_002142399.1 197362762 complement(1735395..1735811) 1 NC_011147.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 1735811 flgB 554290001664 flgB Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body rod protein FlgB YP_002142399.1 1735395 R 554290 CDS YP_002142400.1 197362763 1735968..1736627 1 NC_011147.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1736627 flgA 554290001665 flgA Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellar basal body P-ring biosynthesis protein FlgA YP_002142400.1 1735968 D 554290 CDS YP_002142401.1 197362764 1736719..1737012 1 NC_011147.1 regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM 1737012 554290001666 SSPA1561 Salmonella enterica subsp. enterica serovar Paratyphi A str. anti-sigma-28 factor FlgM YP_002142401.1 1736719 D 554290 CDS YP_002142402.1 197362765 1737017..1737439 1 NC_011147.1 similar to Salmonella typhi CT18 flagella synthesis protein FlgN; flagella synthesis protein FlgN 1737439 554290001667 SSPA1562 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagella synthesis protein FlgN YP_002142402.1 1737017 D 554290 CDS YP_002142403.1 197362766 complement(1737521..1739095) 1 NC_011147.1 similar to Salmonella typhi CT18 virulence factor MviN; virulence factor MviN 1739095 554290001668 SSPA1563 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence factor MviN YP_002142403.1 1737521 R 554290 CDS YP_002142404.1 197362767 complement(1739360..1740283) 1 NC_011147.1 similar to Salmonella typhi CT18 virulence factor MviM; virulence factor MviM 1740283 554290001669 SSPA1564 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence factor MviM YP_002142404.1 1739360 R 554290 CDS YP_002142405.1 197362768 complement(1740285..1740932) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1740932 554290001670 SSPA1565 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142405.1 1740285 R 554290 CDS YP_002142406.1 197362769 complement(1740968..1741552) 1 NC_011147.1 similar to Salmonella typhi CT18 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase 1741552 554290001671 SSPA1566 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosomal-protein-S5-alanine N-acetyltransferase YP_002142406.1 1740968 R 554290 CDS YP_002142407.1 197362770 1741789..1742997 1 NC_011147.1 Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 1742997 554290001672 SSPA1567 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug resistance protein MdtH YP_002142407.1 1741789 D 554290 CDS YP_002142408.1 197362771 1743061..1743708 1 NC_011147.1 cofactor involved in the reduction of disulfides; glutaredoxin 1743708 554290001673 SSPA1568 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutaredoxin YP_002142408.1 1743061 D 554290 CDS YP_008144950.1 516595078 1743833..1744393 1 NC_011147.1 hypothetical protein 1744393 yceB 554290001674 yceB Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_008144950.1 1743833 D 554290 CDS YP_002142409.1 197362772 1744497..1745543 1 NC_011147.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1745543 554290001675 SSPA1569 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydroorotase YP_002142409.1 1744497 D 554290 CDS YP_002142410.1 197362773 1745617..1745862 1 NC_011147.1 similar to Salmonella typhi CT18 damage-inducible protein; DNA damage-inducible protein I 1745862 554290001676 SSPA1570 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA damage-inducible protein I YP_002142410.1 1745617 D 554290 CDS YP_002142411.1 197362774 1746152..1746406 1 NC_011147.1 'BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing'; biofilm formation regulatory protein BssS 1746406 bssS 554290001677 bssS Salmonella enterica subsp. enterica serovar Paratyphi A str. biofilm formation regulatory protein BssS YP_002142411.1 1746152 D 554290 CDS YP_002142412.2 449784942 1746519..1747637 1 NC_011147.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 1747637 solA 554290001678 solA Salmonella enterica subsp. enterica serovar Paratyphi A str. N-methyltryptophan oxidase YP_002142412.2 1746519 D 554290 CDS YP_002142413.1 197362776 1747678..1747791 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1747791 554290001679 SSPA1573 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142413.1 1747678 D 554290 CDS YP_002142414.1 197362777 1748054..1748626 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome; cytochrome 1748626 554290001680 SSPA1574 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome YP_002142414.1 1748054 D 554290 CDS YP_002142415.1 197362778 1748623..1749198 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1749198 554290001681 SSPA1575 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142415.1 1748623 D 554290 CDS YP_002142416.1 197362779 complement(1749250..1750302) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1750302 554290001682 SSPA1576 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142416.1 1749250 R 554290 CDS YP_002142417.1 197362780 1750522..1751442 1 NC_011147.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1751442 554290001683 SSPA1577 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipid A biosynthesis lauroyl acyltransferase YP_002142417.1 1750522 D 554290 CDS YP_002142418.1 197362781 1751597..1752811 1 NC_011147.1 Confers resistance to fosfomycin and deoxycholate; drug efflux system protein MdtG 1752811 554290001684 SSPA1578 Salmonella enterica subsp. enterica serovar Paratyphi A str. drug efflux system protein MdtG YP_002142418.1 1751597 D 554290 CDS YP_002142419.1 197362782 1752893..1753267 1 NC_011147.1 similar to Salmonella typhi CT18 acidic protein MsyB; multicopy suppressor of SecY; hypothetical protein 1753267 554290001685 SSPA1579 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142419.1 1752893 D 554290 CDS YP_002142420.1 197362783 complement(1753268..1753495) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 1753495 554290001686 SSPA1580 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142420.1 1753268 R 554290 CDS YP_002142421.1 197362784 complement(1753569..1756112) 1 NC_011147.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 1756112 554290001687 SSPA1581 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucosyltransferase MdoH YP_002142421.1 1753569 R 554290 CDS YP_002142422.1 197362785 complement(1756105..1757640) 1 NC_011147.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 1757640 mdoG 554290001688 mdoG Salmonella enterica subsp. enterica serovar Paratyphi A str. glucan biosynthesis protein G YP_002142422.1 1756105 R 554290 CDS YP_002142423.1 197362786 1757912..1759066 1 NC_011147.1 required for the transfer of succinyl residues to the glucan backbone; glucans biosynthesis protein 1759066 mdoC 554290001689 mdoC Salmonella enterica subsp. enterica serovar Paratyphi A str. glucans biosynthesis protein YP_002142423.1 1757912 D 554290 CDS YP_002142424.1 197362787 complement(1759083..1760570) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1760570 554290001690 SSPA1584 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142424.1 1759083 R 554290 CDS YP_002142425.1 197362788 complement(1760506..1761045) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1761045 554290001691 SSPA1585 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142425.1 1760506 R 554290 CDS YP_002142426.1 197362789 complement(1761134..1761454) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1761454 554290001692 SSPA1586 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142426.1 1761134 R 554290 CDS YP_002142427.1 197362790 complement(1761586..1761912) 1 NC_011147.1 involved in autoagglutination of curliated cells; not involved in production of curli fibers; autoagglutination protein 1761912 csgC 554290001693 csgC Salmonella enterica subsp. enterica serovar Paratyphi A str. autoagglutination protein YP_002142427.1 1761586 R 554290 CDS YP_002142428.1 197362791 complement(1761974..1762429) 1 NC_011147.1 similar to Salmonella typhi CT18 major curlin subunit precursor; cryptic curlin major subunit 1762429 554290001694 SSPA1588 Salmonella enterica subsp. enterica serovar Paratyphi A str. cryptic curlin major subunit YP_002142428.1 1761974 R 554290 CDS YP_002142429.1 197362792 complement(1762471..1762926) 1 NC_011147.1 CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; curlin minor subunit 1762926 554290001695 SSPA1589 Salmonella enterica subsp. enterica serovar Paratyphi A str. curlin minor subunit YP_002142429.1 1762471 R 554290 CDS YP_002142430.1 197362793 1763681..1764331 1 NC_011147.1 activates the csgBA and csgDEFG operons involved in biofilm formation; DNA-binding transcriptional regulator CsgD 1764331 554290001696 SSPA1590 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator CsgD YP_002142430.1 1763681 D 554290 CDS YP_002142431.1 197362794 1764336..1764731 1 NC_011147.1 chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; curli assembly protein CsgE 1764731 554290001697 SSPA1591 Salmonella enterica subsp. enterica serovar Paratyphi A str. curli assembly protein CsgE YP_002142431.1 1764336 D 554290 CDS YP_002142432.2 449784943 1765201..1766034 1 NC_011147.1 similar to Salmonella typhi CT18 assembly/transport component in curli production; assembly/transport component in curli production 1766034 554290001699 SSPA1592 Salmonella enterica subsp. enterica serovar Paratyphi A str. assembly/transport component in curli production YP_002142432.2 1765201 D 554290 CDS YP_002142433.1 197362796 complement(1766073..1766603) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1766603 554290001700 SSPA1593 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142433.1 1766073 R 554290 CDS YP_002142434.1 197362797 complement(1766656..1767210) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1767210 554290001701 SSPA1594 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142434.1 1766656 R 554290 CDS YP_002142435.1 197362798 complement(1767234..1767971) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hydrolase 1767971 554290001702 SSPA1595 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002142435.1 1767234 R 554290 CDS YP_002142436.1 197362799 complement(1768056..1768994) 1 NC_011147.1 similar to Salmonella typhi CT18 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region; 2-hydroxyacid dehydrogenase 1768994 554290001703 SSPA1596 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-hydroxyacid dehydrogenase YP_002142436.1 1768056 R 554290 CDS YP_002142437.1 197362800 complement(1769469..1770572) 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1770572 554290001705 SSPA1597 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002142437.1 1769469 R 554290 CDS YP_002142438.1 197362801 complement(1770586..1771866) 1 NC_011147.1 similar to Salmonella typhi CT18 transporter; sialic acid transporter 1771866 554290001706 SSPA1598 Salmonella enterica subsp. enterica serovar Paratyphi A str. sialic acid transporter YP_002142438.1 1770586 R 554290 CDS YP_002142439.1 197362802 complement(1772149..1772841) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1772841 554290001707 SSPA1599 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142439.1 1772149 R 554290 CDS YP_002142440.1 197362803 1774552..1775232 1 NC_011147.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 1775232 554290001709 SSPA1600 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmannosamine-6-phosphate 2-epimerase YP_002142440.1 1774552 D 554290 CDS YP_002142441.1 197362804 1775569..1777065 1 NC_011147.1 similar to Salmonella typhimurium sodium/glucose cotransporter; sodium/glucose cotransporter 1777065 554290001710 SSPA1601 Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium/glucose cotransporter YP_002142441.1 1775569 D 554290 CDS YP_002142442.1 197362805 1777351..1778232 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1778232 554290001711 SSPA1602 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002142442.1 1777351 D 554290 CDS YP_002142443.1 197362806 complement(1778338..1779192) 1 NC_011147.1 similar to Salmonella typhi CT18 PhoH protein (phosphate starvation-inducible protein PsiH); hypothetical protein 1779192 554290001712 SSPA1603 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142443.1 1778338 R 554290 CDS YP_002142444.1 197362807 complement(1780018..1781526) 1 NC_011147.1 similar to Salmonella typhi CT18 sodium/proline symporter (proline permease); sodium/proline symporter 1781526 554290001713 SSPA1604 Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium/proline symporter YP_002142444.1 1780018 R 554290 CDS YP_002142445.1 197362808 1782005..1785910 1 NC_011147.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1785910 putA 554290001714 putA Salmonella enterica subsp. enterica serovar Paratyphi A str. multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_002142445.1 1782005 D 554290 CDS YP_002142446.1 197362809 1785969..1786364 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1786364 554290001715 SSPA1606 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142446.1 1785969 D 554290 CDS YP_002142447.1 197362810 complement(1786361..1786999) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1786999 554290001716 SSPA1607 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002142447.1 1786361 R 554290 CDS YP_002142448.1 197362811 complement(1787135..1787302) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1787302 554290001717 SSPA1608 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142448.1 1787135 R 554290 CDS YP_002142449.1 197362812 1787687..1788283 1 NC_011147.1 stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1788283 554290001718 SSPA1609 Salmonella enterica subsp. enterica serovar Paratyphi A str. TrpR binding protein WrbA YP_002142449.1 1787687 D 554290 CDS YP_002142450.1 197362813 1788304..1788531 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1788531 554290001719 SSPA1610 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142450.1 1788304 D 554290 CDS YP_002142451.1 197362814 complement(1788565..1789806) 1 NC_011147.1 'similar to Salmonella typhi CT18 glucose-1-phosphatase precursor (G1Pase), secreted'; glucose-1-phosphatase/inositol phosphatase 1789806 554290001720 SSPA1611 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose-1-phosphatase/inositol phosphatase YP_002142451.1 1788565 R 554290 CDS YP_002142452.1 197362815 complement(1789939..1790445) 1 NC_011147.1 'similar to Salmonella typhi CT18 secreted protein,suppressor for copper-sensitivity D'; copper sensitivity supressor protein D 1790445 554290001721 SSPA1612 Salmonella enterica subsp. enterica serovar Paratyphi A str. copper sensitivity supressor protein D YP_002142452.1 1789939 R 554290 CDS YP_002142453.1 197362816 complement(1790435..1791058) 1 NC_011147.1 'similar to Salmonella typhi CT18 secreted protein,suppressor for copper-sensitivity C precursor'; copper sensitivity supressor protein C 1791058 554290001722 SSPA1613 Salmonella enterica subsp. enterica serovar Paratyphi A str. copper sensitivity supressor protein C YP_002142453.1 1790435 R 554290 CDS YP_002142454.1 197362817 complement(1792990..1793352) 1 NC_011147.1 'similar to Salmonella typhi CT18 membrane protein,suppressor for copper-sensitivity A'; copper sensitivitysuppressor membrane protein A 1793352 554290001724 SSPA1614 Salmonella enterica subsp. enterica serovar Paratyphi A str. copper sensitivitysuppressor membrane protein A YP_002142454.1 1792990 R 554290 CDS YP_002142455.1 197362818 1793588..1794508 1 NC_011147.1 'functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock'; curved DNA-binding protein CbpA 1794508 554290001725 SSPA1615 Salmonella enterica subsp. enterica serovar Paratyphi A str. curved DNA-binding protein CbpA YP_002142455.1 1793588 D 554290 CDS YP_002142456.1 197362819 1794508..1794813 1 NC_011147.1 with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; chaperone-modulator protein CbpM 1794813 554290001726 SSPA1616 Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone-modulator protein CbpM YP_002142456.1 1794508 D 554290 CDS YP_002142457.1 197362820 1795467..1795829 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1795829 554290001727 SSPA1617 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142457.1 1795467 D 554290 CDS YP_002142458.1 197362821 complement(1796237..1797154) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1797154 554290001728 SSPA1618 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142458.1 1796237 R 554290 CDS YP_002142459.1 197362822 complement(1797189..1798085) 1 NC_011147.1 similar to Salmonella typhi CT18 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein; 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein 1798085 554290001729 SSPA1619 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein YP_002142459.1 1797189 R 554290 CDS YP_002142460.1 197362823 complement(1798095..1799471) 1 NC_011147.1 similar to Salmonella typhi CT18 4-hydroxyphenylacetate permease; 4-hydroxyphenylacetate permease 1799471 554290001730 SSPA1620 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxyphenylacetate permease YP_002142460.1 1798095 R 554290 CDS YP_002142461.1 197362824 complement(1799544..1800335) 1 NC_011147.1 'similar to Salmonella typhi Ty2 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase'; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1800335 554290001731 SSPA1621 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_002142461.1 1799544 R 554290 CDS YP_002142462.1 197362825 complement(1800346..1801149) 1 NC_011147.1 'similar to Salmonella typhi Ty2 2-oxo-hepta-3-ene-1,7-dioic acid hydratase'; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1801149 554290001732 SSPA1622 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-oxo-hepta-3-ene-1,7-dioic acid hydratase YP_002142462.1 1800346 R 554290 CDS YP_002142463.1 197362826 complement(1801292..1801672) 1 NC_011147.1 similar to Salmonella typhi Ty2 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 1801672 554290001733 SSPA1623 Salmonella enterica subsp. enterica serovar Paratyphi A str. 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_002142463.1 1801292 R 554290 CDS YP_002142464.1 197362827 complement(1801682..1802533) 1 NC_011147.1 'similar to Salmonella typhi Ty2 3,4-dihydroxyphenylacetate 2,3-dioxygenase'; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1802533 554290001734 SSPA1624 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3,4-dihydroxyphenylacetate 2,3-dioxygenase YP_002142464.1 1801682 R 554290 CDS YP_002142465.1 197362828 complement(1802535..1804001) 1 NC_011147.1 similar to Salmonella typhimurium 4-hydroxyphenylacetate catabolism; 4-hydroxyphenylacetate catabolism 1804001 554290001735 SSPA1625 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxyphenylacetate catabolism YP_002142465.1 1802535 R 554290 CDS YP_002142466.1 197362829 1805561..1806001 1 NC_011147.1 similar to Salmonella typhi Ty2 homoprotocatechuate degradative operon repressor; homoprotocatechuate degradative operon repressor 1806001 554290001737 SSPA1626 Salmonella enterica subsp. enterica serovar Paratyphi A str. homoprotocatechuate degradative operon repressor YP_002142466.1 1805561 D 554290 CDS YP_002142467.2 449784944 1806219..1807781 1 NC_011147.1 similar to Salmonella typhi CT18 4-hydroxyphenylacetate 3-monooxygenase; 4-hydroxyphenylacetate 3-monooxygenase 1807781 554290001738 SSPA1627 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxyphenylacetate 3-monooxygenase YP_002142467.2 1806219 D 554290 CDS YP_002142468.1 197362831 1807799..1808311 1 NC_011147.1 similar to Salmonella typhi CT18 4-hydroxyphenylacetate 3-monooxygenase coupling protein; 4-hydroxyphenylacetate 3-monooxygenase coupling protein 1808311 554290001739 SSPA1628 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxyphenylacetate 3-monooxygenase coupling protein YP_002142468.1 1807799 D 554290 CDS YP_002142469.1 197362832 complement(1808644..1809054) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1809054 554290001740 SSPA1629 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142469.1 1808644 R 554290 CDS YP_002142470.1 197362833 1809190..1809870 1 NC_011147.1 induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced; transcriptional regulatory protein YedW 1809870 554290001741 SSPA1630 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulatory protein YedW YP_002142470.1 1809190 D 554290 CDS YP_002142471.1 197362834 1809863..1811227 1 NC_011147.1 similar to Salmonella typhi CT18 histidine kinase; histidine kinase 1811227 554290001742 SSPA1631 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine kinase YP_002142471.1 1809863 D 554290 CDS YP_002142472.1 197362835 1812978..1813088 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1813088 554290001744 SSPA1632 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142472.1 1812978 D 554290 CDS YP_002142473.1 197362836 complement(1813089..1813259) 1 NC_011147.1 orfX; similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1813259 554290001745 SSPA1633 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142473.1 1813089 R 554290 CDS YP_002142474.1 197362837 1813592..1815277 1 NC_011147.1 similar to Salmonella typhi Ty2 cell invasion protein; cell invasion protein 1815277 554290001746 SSPA1634 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell invasion protein YP_002142474.1 1813592 D 554290 CDS YP_002142475.1 197362838 1815294..1815635 1 NC_011147.1 similar to Salmonella typhi Ty2 cell invasion protein; cell invasion protein 1815635 554290001747 SSPA1635 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell invasion protein YP_002142475.1 1815294 D 554290 CDS YP_002142476.1 197362839 complement(1815645..1815965) 1 NC_011147.1 inner membrane protein 1815965 554290001748 SSPA1636 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142476.1 1815645 R 554290 CDS YP_002142477.1 197362840 1816183..1817058 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1817058 554290001749 SSPA1637 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142477.1 1816183 D 554290 CDS YP_002142478.1 197362841 1817281..1817961 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1817961 554290001750 SSPA1638 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142478.1 1817281 D 554290 CDS YP_002142479.2 449784945 1818580..1819239 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1819239 554290001752 SSPA1639 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142479.2 1818580 D 554290 CDS YP_002142480.1 197362843 1819326..1819655 1 NC_011147.1 transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein TusE 1819655 554290001753 SSPA1640 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfur transfer protein TusE YP_002142480.1 1819326 D 554290 CDS YP_002142481.1 197362844 complement(1819652..1819933) 1 NC_011147.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1819933 554290001754 SSPA1641 Salmonella enterica subsp. enterica serovar Paratyphi A str. acylphosphatase YP_002142481.1 1819652 R 554290 CDS YP_002142482.1 197362845 complement(1819982..1820761) 1 NC_011147.1 'similar to Salmonella typhimurium bacterial regulatory protein, AraC family'; araC family transcriptional regulator 1820761 554290001755 SSPA1642 Salmonella enterica subsp. enterica serovar Paratyphi A str. araC family transcriptional regulator YP_002142482.1 1819982 R 554290 CDS YP_002142483.1 197362846 1821549..1822760 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1822760 554290001757 SSPA1643 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142483.1 1821549 D 554290 CDS YP_002142484.1 197362847 1822818..1823135 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; heat shock protein HspQ 1823135 554290001758 SSPA1644 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat shock protein HspQ YP_002142484.1 1822818 D 554290 CDS YP_002142485.1 197362848 complement(1823180..1823593) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1823593 554290001759 SSPA1645 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142485.1 1823180 R 554290 CDS YP_002142486.1 197362849 1823767..1824429 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1824429 554290001760 SSPA1646 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142486.1 1823767 D 554290 CDS YP_002142487.1 197362850 1824524..1824982 1 NC_011147.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1824982 mgsA 554290001761 mgsA Salmonella enterica subsp. enterica serovar Paratyphi A str. methylglyoxal synthase YP_002142487.1 1824524 D 554290 CDS YP_002142488.1 197362851 complement(1825018..1827072) 1 NC_011147.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 1827072 helD 554290001762 helD Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA helicase IV YP_002142488.1 1825018 R 554290 CDS YP_002142489.1 197362852 1827196..1827642 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1827642 554290001763 SSPA1649 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142489.1 1827196 D 554290 CDS YP_002142490.1 197362853 1827661..1829814 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1829814 554290001764 SSPA1650 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142490.1 1827661 D 554290 CDS YP_002142491.1 197362854 complement(1829801..1830406) 1 NC_011147.1 'similar to Salmonella typhi CT18 conserved hypothetical protein; SNP @ nt immediately before START codon (-1); Sanger - a, McClelland - g'; hypothetical protein 1830406 554290001765 SSPA1651 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142491.1 1829801 R 554290 CDS YP_002142492.1 197362855 1830623..1831132 1 NC_011147.1 similar to Salmonella typhi CT18 cell division inhibitor; SOS cell division inhibitor 1831132 554290001766 SSPA1652 Salmonella enterica subsp. enterica serovar Paratyphi A str. SOS cell division inhibitor YP_002142492.1 1830623 D 554290 CDS YP_002142493.1 197362856 1831489..1832541 1 NC_011147.1 'OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d'; outer membrane protein A 1832541 554290001767 SSPA1653 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein A YP_002142493.1 1831489 D 554290 CDS YP_002142494.1 197362857 complement(1832613..1833065) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1833065 554290001768 SSPA1654 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142494.1 1832613 R 554290 CDS YP_002142495.2 449784946 1833251..1835011 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1835011 554290001769 SSPA1655 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142495.2 1833251 D 554290 CDS YP_002142496.1 197362859 1835080..1835598 1 NC_011147.1 'catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP'; 3-hydroxydecanoyl-ACP dehydratase 1835598 554290001770 SSPA1656 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-hydroxydecanoyl-ACP dehydratase YP_002142496.1 1835080 D 554290 CDS YP_002142497.1 197362860 complement(1835698..1835865) 1 NC_011147.1 similar to Salmonella typhi CT18 ribosome modulation factor (protein E); ribosome modulation factor 1835865 554290001771 SSPA1657 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome modulation factor YP_002142497.1 1835698 R 554290 CDS YP_002142498.1 197362861 complement(1836121..1836684) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1836684 554290001772 SSPA1658 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142498.1 1836121 R 554290 CDS YP_002142499.1 197362862 complement(1836681..1838321) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; paraquat-inducible protein B 1838321 554290001773 SSPA1659 Salmonella enterica subsp. enterica serovar Paratyphi A str. paraquat-inducible protein B YP_002142499.1 1836681 R 554290 CDS YP_002142500.1 197362863 complement(1838326..1839579) 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 1839579 554290001774 SSPA1660 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142500.1 1838326 R 554290 CDS YP_002142501.1 197362864 complement(1839594..1841501) 1 NC_011147.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1841501 554290001775 SSPA1661 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATPase YP_002142501.1 1839594 R 554290 CDS YP_002142502.1 197362865 complement(1841514..1843622) 1 NC_011147.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1843622 rlmL 554290001776 rlmL Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA m(2)G2445 methyltransferase YP_002142502.1 1841514 R 554290 CDS YP_002142503.1 197362866 1843721..1844830 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1844830 554290001777 SSPA1663 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142503.1 1843721 D 554290 CDS YP_002142504.1 197362867 complement(1844827..1845369) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1845369 554290001778 SSPA1664 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142504.1 1844827 R 554290 CDS YP_002142505.1 197362868 complement(1845535..1846545) 1 NC_011147.1 'catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors'; dihydroorotate dehydrogenase 2 1846545 554290001779 SSPA1665 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydroorotate dehydrogenase 2 YP_002142505.1 1845535 R 554290 CDS YP_002142506.1 197362869 complement(1846753..1849365) 1 NC_011147.1 similar to Salmonella typhi CT18 aminopeptidase N; aminopeptidase N 1849365 pepN 554290001780 pepN Salmonella enterica subsp. enterica serovar Paratyphi A str. aminopeptidase N YP_002142506.1 1846753 R 554290 CDS YP_002142507.1 197362870 1849632..1850834 1 NC_011147.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1850834 554290001781 SSPA1667 Salmonella enterica subsp. enterica serovar Paratyphi A str. nicotinate phosphoribosyltransferase YP_002142507.1 1849632 D 554290 CDS YP_002142508.1 197362871 complement(1850912..1852348) 1 NC_011147.1 similar to Salmonella typhi CT18 ion:amino acid symporter; ion:amino acid symporter 1852348 554290001782 SSPA1668 Salmonella enterica subsp. enterica serovar Paratyphi A str. ion:amino acid symporter YP_002142508.1 1850912 R 554290 CDS YP_002142509.1 197362872 complement(1852594..1853808) 1 NC_011147.1 'catalyzes the formation of pyruvate from 2,3-diaminopropionate'; diaminopropionate ammonia-lyase 1853808 554290001783 SSPA1669 Salmonella enterica subsp. enterica serovar Paratyphi A str. diaminopropionate ammonia-lyase YP_002142509.1 1852594 R 554290 CDS YP_002142510.1 197362873 1854126..1854587 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1854587 554290001784 SSPA1670 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002142510.1 1854126 D 554290 CDS YP_002142511.1 197362874 1854788..1856188 1 NC_011147.1 'catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; asparaginyl-tRNA synthetase 1856188 asnC 554290001785 asnC Salmonella enterica subsp. enterica serovar Paratyphi A str. asparaginyl-tRNA synthetase YP_002142511.1 1854788 D 554290 CDS YP_002142512.1 197362875 1856795..1857886 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein F precursor; outer membrane protein F 1857886 554290001786 SSPA1672 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein F YP_002142512.1 1856795 D 554290 CDS YP_002142513.1 197362876 1858071..1859261 1 NC_011147.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1859261 554290001787 SSPA1673 Salmonella enterica subsp. enterica serovar Paratyphi A str. aromatic amino acid aminotransferase YP_002142513.1 1858071 D 554290 CDS YP_002142514.1 197362877 complement(1859323..1859970) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1859970 554290001788 SSPA1674 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142514.1 1859323 R 554290 CDS YP_002142515.1 197362878 complement(1859998..1860546) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1860546 554290001789 SSPA1675 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142515.1 1859998 R 554290 CDS YP_002142516.1 197362879 complement(1860806..1862653) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1862653 554290001790 SSPA1676 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142516.1 1860806 R 554290 CDS YP_002142517.1 197362880 complement(1862998..1867464) 1 NC_011147.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1867464 mukB 554290001791 mukB Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein MukB YP_002142517.1 1862998 R 554290 CDS YP_002142518.1 197362881 complement(1867464..1868141) 1 NC_011147.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1868141 554290001792 SSPA1678 Salmonella enterica subsp. enterica serovar Paratyphi A str. condesin subunit E YP_002142518.1 1867464 R 554290 CDS YP_002142519.1 197362882 complement(1868149..1869471) 1 NC_011147.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1869471 554290001793 SSPA1679 Salmonella enterica subsp. enterica serovar Paratyphi A str. condesin subunit F YP_002142519.1 1868149 R 554290 CDS YP_002142520.1 197362883 complement(1869464..1870267) 1 NC_011147.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA 1870267 554290001794 SSPA1680 Salmonella enterica subsp. enterica serovar Paratyphi A str. metallothionein SmtA YP_002142520.1 1869464 R 554290 CDS YP_002142521.1 197362884 1870403..1871179 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1871179 554290001795 SSPA1681 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142521.1 1870403 D 554290 CDS YP_002142522.1 197362885 complement(1871159..1872052) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1872052 554290001796 SSPA1682 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142522.1 1871159 R 554290 CDS YP_002142523.1 197362886 complement(1872263..1873009) 1 NC_011147.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1873009 554290001797 SSPA1683 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-deoxy-manno-octulosonate cytidylyltransferase YP_002142523.1 1872263 R 554290 CDS YP_002142524.1 197362887 complement(1873006..1873188) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1873188 554290001798 SSPA1684 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142524.1 1873006 R 554290 CDS YP_002142525.1 197362888 complement(1873240..1874472) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1874472 554290001799 SSPA1685 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142525.1 1873240 R 554290 CDS YP_002142526.1 197362889 complement(1874516..1875493) 1 NC_011147.1 'transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate'; tetraacyldisaccharide 4'-kinase 1875493 lpxK 554290001800 lpxK Salmonella enterica subsp. enterica serovar Paratyphi A str. tetraacyldisaccharide 4'-kinase YP_002142526.1 1874516 R 554290 CDS YP_002142527.1 197362890 complement(1875490..1877238) 1 NC_011147.1 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding protein/permease 1877238 554290001801 SSPA1687 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipid transporter ATP-binding protein/permease YP_002142527.1 1875490 R 554290 CDS YP_002142528.1 197362891 complement(1879769..1880053) 1 NC_011147.1 'This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control'; integration host factor subunit beta 1880053 ihfB 554290001803 ihfB Salmonella enterica subsp. enterica serovar Paratyphi A str. integration host factor subunit beta YP_002142528.1 1879769 R 554290 CDS YP_002142529.1 197362892 complement(1880209..1881882) 1 NC_011147.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1881882 rpsA 554290001804 rpsA Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S1 YP_002142529.1 1880209 R 554290 CDS YP_002142530.1 197362893 complement(1881996..1882679) 1 NC_011147.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 1882679 cmk 554290001805 cmk Salmonella enterica subsp. enterica serovar Paratyphi A str. cytidylate kinase YP_002142530.1 1881996 R 554290 CDS YP_002142531.1 197362894 complement(1882852..1883613) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1883613 554290001806 SSPA1691 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142531.1 1882852 R 554290 CDS YP_002142532.1 197362895 complement(1883756..1885039) 1 NC_011147.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1885039 554290001807 SSPA1692 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-phosphoshikimate 1-carboxyvinyltransferase YP_002142532.1 1883756 R 554290 CDS YP_002142533.1 197362896 complement(1885110..1886162) 1 NC_011147.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1886162 554290001808 SSPA1693 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoserine aminotransferase YP_002142533.1 1885110 R 554290 CDS YP_002142534.1 197362897 complement(1886384..1887076) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1887076 554290001809 SSPA1694 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142534.1 1886384 R 554290 CDS YP_002142535.1 197362898 1887213..1888973 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1888973 554290001810 SSPA1695 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142535.1 1887213 D 554290 CDS YP_002142536.1 197362899 1889378..1890235 1 NC_011147.1 similar to Salmonella typhi CT18 probable formate transporter (formate channel); formate transporter 1890235 554290001811 SSPA1696 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate transporter YP_002142536.1 1889378 D 554290 CDS YP_002142537.1 197362900 1890295..1892577 1 NC_011147.1 similar to Salmonella typhi CT18 formate acetyltransferase 1; formate acetyltransferase 1 1892577 554290001812 SSPA1697 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate acetyltransferase 1 YP_002142537.1 1890295 D 554290 CDS YP_002142538.1 197362901 1893743..1894069 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1894069 554290001814 SSPA1700 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142538.1 1893743 D 554290 CDS YP_002142539.1 197362902 1894188..1894985 1 NC_011147.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate-lyase activating protein 1 1894985 pflA 554290001815 pflA Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate formate-lyase activating protein 1 YP_002142539.1 1894188 D 554290 CDS YP_002142540.1 197362903 complement(1895278..1896699) 1 NC_011147.1 similar to Salmonella typhi CT18 probable transport protein; transporter 1896699 554290001816 SSPA1702 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002142540.1 1895278 R 554290 CDS YP_002142541.1 197362904 complement(1896917..1898065) 1 NC_011147.1 similar to Salmonella typhi CT18 probable transport protein; MFS family transporter protein 1898065 554290001817 SSPA1703 Salmonella enterica subsp. enterica serovar Paratyphi A str. MFS family transporter protein YP_002142541.1 1896917 R 554290 CDS YP_002142542.1 197362905 complement(1898278..1898385) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1898385 554290001818 SSPA1704 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142542.1 1898278 R 554290 CDS YP_002142543.1 197362906 complement(1899280..1899897) 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain B; anaerobic dimethyl sulfoxide reductase subunit B 1899897 554290001820 SSPA1705 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic dimethyl sulfoxide reductase subunit B YP_002142543.1 1899280 R 554290 CDS YP_002142544.1 197362907 complement(1899908..1902352) 1 NC_011147.1 similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain A precursor; anaerobic dimethyl sulfoxide reductase subunit A 1902352 554290001821 SSPA1706 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic dimethyl sulfoxide reductase subunit A YP_002142544.1 1899908 R 554290 CDS YP_002142545.1 197362908 complement(1902588..1903880) 1 NC_011147.1 'catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; seryl-tRNA synthetase 1903880 554290001822 SSPA1707 Salmonella enterica subsp. enterica serovar Paratyphi A str. seryl-tRNA synthetase YP_002142545.1 1902588 R 554290 CDS YP_002142546.1 197362909 complement(1904139..1905482) 1 NC_011147.1 similar to Salmonella typhi CT18 conserevd hypothetical protein; recombination factor protein RarA 1905482 554290001823 SSPA1708 Salmonella enterica subsp. enterica serovar Paratyphi A str. recombination factor protein RarA YP_002142546.1 1904139 R 554290 CDS YP_002142547.2 449784947 complement(1905492..1906106) 1 NC_011147.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1906106 lolA 554290001824 lolA Salmonella enterica subsp. enterica serovar Paratyphi A str. outer-membrane lipoprotein carrier protein YP_002142547.2 1905492 R 554290 CDS YP_002142548.1 197362911 complement(1906246..1910346) 1 NC_011147.1 DNA-binding membrane protein required for chromosome resolution and partitioning; DNA translocase FtsK 1910346 554290001825 SSPA1710 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA translocase FtsK YP_002142548.1 1906246 R 554290 CDS YP_002142549.1 197362912 complement(1910481..1910975) 1 NC_011147.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 1910975 554290001826 SSPA1711 Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine-responsive transcriptional regulator YP_002142549.1 1910481 R 554290 CDS YP_002142550.1 197362913 1911522..1912490 1 NC_011147.1 catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; thioredoxin reductase 1912490 554290001827 SSPA1712 Salmonella enterica subsp. enterica serovar Paratyphi A str. thioredoxin reductase YP_002142550.1 1911522 D 554290 CDS YP_002142551.2 449784948 1912604..1914370 1 NC_011147.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1914370 554290001828 SSPA1713 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_002142551.2 1912604 D 554290 CDS YP_002142552.1 197362915 1914371..1916092 1 NC_011147.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1916092 554290001829 SSPA1714 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_002142552.1 1914371 D 554290 CDS YP_002142553.1 197362916 1916137..1916841 1 NC_011147.1 'leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys'; leucyl/phenylalanyl-tRNA--protein transferase 1916841 aat 554290001830 aat Salmonella enterica subsp. enterica serovar Paratyphi A str. leucyl/phenylalanyl-tRNA--protein transferase YP_002142553.1 1916137 D 554290 CDS YP_002142554.1 197362917 1916842..1917225 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 1917225 554290001831 SSPA1716 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142554.1 1916842 D 554290 CDS YP_002142555.1 197362918 1917153..1917371 1 NC_011147.1 'stimulates the activities of the other two initiation factors, IF-2 and IF-3'; translation initiation factor IF-1 1917371 infA 554290001832 infA Salmonella enterica subsp. enterica serovar Paratyphi A str. translation initiation factor IF-1 YP_002142555.1 1917153 D 554290 CDS YP_002142556.1 197362919 complement(1917462..1918373) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical transcriptional activator; hypothetical protein 1918373 554290001833 SSPA1718 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142556.1 1917462 R 554290 CDS YP_002142557.1 197362920 1918482..1919342 1 NC_011147.1 similar to Salmonella typhi CT18 pirin-related protein; pirin-like protein 1919342 554290001834 SSPA1719 Salmonella enterica subsp. enterica serovar Paratyphi A str. pirin-like protein YP_002142557.1 1918482 D 554290 CDS YP_002142558.1 197362921 1919362..1920039 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1920039 554290001835 SSPA1720 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142558.1 1919362 D 554290 CDS YP_002142559.1 197362922 1920393..1920605 1 NC_011147.1 hypothetical protein 1920605 554290001837 SSPA1721 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142559.1 1920393 D 554290 CDS YP_002142560.1 197362923 1920713..1921090 1 NC_011147.1 similar to Salmonella typhi CT18 probable integrase remnant; integrase remnant 1921090 554290001838 SSPA1722 Salmonella enterica subsp. enterica serovar Paratyphi A str. integrase remnant YP_002142560.1 1920713 D 554290 CDS YP_002142561.1 197362924 1921252..1921449 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1921449 554290001839 SSPA1723 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142561.1 1921252 D 554290 CDS YP_002142562.1 197362925 complement(1923879..1926155) 1 NC_011147.1 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 1926155 clpA 554290001841 clpA Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent Clp protease ATP-binding subunit YP_002142562.1 1923879 R 554290 CDS YP_002142563.1 197362926 complement(1926186..1926506) 1 NC_011147.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1926506 clpS 554290001842 clpS Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent Clp protease adaptor protein ClpS YP_002142563.1 1926186 R 554290 CDS YP_002142564.1 197362927 1926830..1927051 1 NC_011147.1 similar to Salmonella typhi CT18 cold shock-like protein CspD; cold shock-like protein CspD 1927051 554290001843 SSPA1726 Salmonella enterica subsp. enterica serovar Paratyphi A str. cold shock-like protein CspD YP_002142564.1 1926830 D 554290 CDS YP_002142565.1 197362928 complement(1927181..1929127) 1 NC_011147.1 with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease 1929127 554290001844 SSPA1727 Salmonella enterica subsp. enterica serovar Paratyphi A str. macrolide transporter ATP-binding /permease YP_002142565.1 1927181 R 554290 CDS YP_002142566.1 197362929 complement(1929124..1930242) 1 NC_011147.1 confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA 1930242 554290001845 SSPA1728 Salmonella enterica subsp. enterica serovar Paratyphi A str. macrolide transporter subunit MacA YP_002142566.1 1929124 R 554290 CDS YP_002142567.1 197362930 1930388..1931338 1 NC_011147.1 similar to Salmonella typhi CT18 virK protein; virK protein 1931338 554290001846 SSPA1729 Salmonella enterica subsp. enterica serovar Paratyphi A str. virK protein YP_002142567.1 1930388 D 554290 CDS YP_002142568.1 197362931 complement(1931335..1932993) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1932993 554290001847 SSPA1730 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142568.1 1931335 R 554290 CDS YP_002142569.2 449784949 1933195..1934094 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1934094 554290001848 SSPA1731 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142569.2 1933195 D 554290 CDS YP_002142570.1 197362933 1934238..1935890 1 NC_011147.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1935890 554290001849 SSPA1732 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroxylamine reductase YP_002142570.1 1934238 D 554290 CDS YP_002142571.1 197362934 1935902..1936870 1 NC_011147.1 similar to Salmonella typhi CT18 NADH oxidoreductase Hcr; HCP oxidoreductase, NADH-dependent 1936870 554290001850 SSPA1733 Salmonella enterica subsp. enterica serovar Paratyphi A str. HCP oxidoreductase, NADH-dependent YP_002142571.1 1935902 D 554290 CDS YP_002142572.1 197362935 1937028..1938746 1 NC_011147.1 catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1938746 554290001851 SSPA1734 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate dehydrogenase YP_002142572.1 1937028 D 554290 CDS YP_002142573.1 197362936 1938785..1939786 1 NC_011147.1 'low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine'; L-threonine aldolase 1939786 554290001852 SSPA1735 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-threonine aldolase YP_002142573.1 1938785 D 554290 CDS YP_002142574.1 197362937 1939797..1941230 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1941230 554290001853 SSPA1736 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142574.1 1939797 D 554290 CDS YP_002142575.1 197362938 1941326..1942339 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1942339 554290001854 SSPA1737 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002142575.1 1941326 D 554290 CDS YP_002142576.1 197362939 complement(1942336..1943166) 1 NC_011147.1 similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 1943166 554290001855 SSPA1738 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmuramoyl-L-alanine amidase YP_002142576.1 1942336 R 554290 CDS YP_002142577.1 197362940 complement(1943163..1943486) 1 NC_011147.1 orfB; similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1943486 554290001856 SSPA1739 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142577.1 1943163 R 554290 CDS YP_002142578.1 197362941 1943614..1944129 1 NC_011147.1 induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; lipoprotein 1944129 554290001857 SSPA1740 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142578.1 1943614 D 554290 CDS YP_002142579.1 197362942 1944358..1945086 1 NC_011147.1 With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit 1945086 artP 554290001858 artP Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine transporter ATP-binding subunit YP_002142579.1 1944358 D 554290 CDS YP_002142580.1 197362943 1945104..1945835 1 NC_011147.1 similar to Salmonella typhi CT18 arginine-binding periplasmic protein 1 precursor; arginine-binding periplasmic protein 1 1945835 554290001859 SSPA1742 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine-binding periplasmic protein 1 YP_002142580.1 1945104 D 554290 CDS YP_002142581.1 197362944 1945842..1946558 1 NC_011147.1 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 1946558 554290001860 SSPA1743 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine transporter permease subunit ArtQ YP_002142581.1 1945842 D 554290 CDS YP_002142582.1 197362945 1946558..1947226 1 NC_011147.1 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 1947226 artM 554290001861 artM Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine transporter permease subunit ArtM YP_002142582.1 1946558 D 554290 CDS YP_002142583.1 197362946 1947463..1948194 1 NC_011147.1 similar to Salmonella typhi CT18 arginine-binding periplasmic protein 2 precursor; arginine-binding periplasmic protein 1948194 554290001862 SSPA1745 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine-binding periplasmic protein YP_002142583.1 1947463 D 554290 CDS YP_002142584.1 197362947 complement(1948412..1949899) 1 NC_011147.1 similar to Salmonella typhi CT18 probable sulfatase; sulfatase 1949899 554290001863 SSPA1746 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfatase YP_002142584.1 1948412 R 554290 CDS YP_002142585.1 197362948 complement(1949909..1950229) 1 NC_011147.1 'similar to Salmonella typhi CT18 phosphotransferase enzyme II, B component'; phosphotransferase system subunit IIB 1950229 554290001864 SSPA1747 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransferase system subunit IIB YP_002142585.1 1949909 R 554290 CDS YP_002142586.1 197362949 complement(1950259..1951602) 1 NC_011147.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 1951602 554290001865 SSPA1748 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system ascorbate-specific transporter subunit IIC YP_002142586.1 1950259 R 554290 CDS YP_002142587.1 197362950 complement(1951611..1951820) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1951820 554290001866 SSPA1749 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142587.1 1951611 R 554290 CDS YP_002142588.1 197362951 complement(1951897..1953024) 1 NC_011147.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 1953024 rumB 554290001867 rumB Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA methyluridine methyltransferase YP_002142588.1 1951897 R 554290 CDS YP_002142589.1 197362952 complement(1953067..1953540) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1953540 554290001868 SSPA1751 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142589.1 1953067 R 554290 CDS YP_002142590.1 197362953 complement(1953614..1954459) 1 NC_011147.1 similar to Salmonella typhi CT18 putrescine transport system permease protein PotI; putrescine ABC transporter permease 1954459 554290001869 SSPA1752 Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine ABC transporter permease YP_002142590.1 1953614 R 554290 CDS YP_002142591.1 197362954 complement(1954456..1955409) 1 NC_011147.1 similar to Salmonella typhi CT18 putrescine transport system permease protein PotH; putrescine ABC transporter permease 1955409 554290001870 SSPA1753 Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine ABC transporter permease YP_002142591.1 1954456 R 554290 CDS YP_002142592.1 197362955 complement(1955419..1956552) 1 NC_011147.1 part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein 1956552 potG 554290001871 potG Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine ABC transporter ATP-binding protein YP_002142592.1 1955419 R 554290 CDS YP_002142593.1 197362956 complement(1956640..1957752) 1 NC_011147.1 similar to Salmonella typhi CT18 putrescine-binding periplasmic protein precursor; putrescine ABC transporter substrate-binding protein 1957752 554290001872 SSPA1755 Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine ABC transporter substrate-binding protein YP_002142593.1 1956640 R 554290 CDS YP_002142594.1 197362957 complement(1958101..1958577) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1958577 554290001873 SSPA1756 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142594.1 1958101 R 554290 CDS YP_002142595.1 197362958 complement(1958674..1959576) 1 NC_011147.1 responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; ribosomal protein S6 modification protein 1959576 554290001874 SSPA1757 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosomal protein S6 modification protein YP_002142595.1 1958674 R 554290 CDS YP_002142596.1 197362959 complement(1959634..1960356) 1 NC_011147.1 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A 1960356 554290001875 SSPA1758 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitroreductase A YP_002142596.1 1959634 R 554290 CDS YP_002142597.1 197362960 complement(1960340..1960636) 1 NC_011147.1 YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein 1960636 554290001876 SSPA1759 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142597.1 1960340 R 554290 CDS YP_002142598.1 197362961 1960806..1961069 1 NC_011147.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 1961069 grxA 554290001877 grxA Salmonella enterica subsp. enterica serovar Paratyphi A str. glutaredoxin YP_002142598.1 1960806 D 554290 CDS YP_002142599.1 197362962 complement(1961101..1961478) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1961478 554290001878 SSPA1761 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142599.1 1961101 R 554290 CDS YP_002142600.1 197362963 1961749..1963434 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1963434 554290001879 SSPA1762 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142600.1 1961749 D 554290 CDS YP_002142601.1 197362964 complement(1963551..1964171) 1 NC_011147.1 similar to Salmonella typhi CT18 tetR-family transcriptional regulator; TetR family regulatory protein 1964171 554290001880 SSPA1763 Salmonella enterica subsp. enterica serovar Paratyphi A str. TetR family regulatory protein YP_002142601.1 1963551 R 554290 CDS YP_002142602.2 449784950 1964339..1965550 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1965550 554290001881 SSPA1764 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142602.2 1964339 D 554290 CDS YP_002142603.1 197362966 1965547..1966362 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1966362 554290001882 SSPA1765 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142603.1 1965547 D 554290 CDS YP_002142604.1 197362967 complement(1966416..1967648) 1 NC_011147.1 similar to Salmonella typhi CT18 multidrug translocase MdfA; multidrug translocase MdfA 1967648 554290001883 SSPA1766 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug translocase MdfA YP_002142604.1 1966416 R 554290 CDS YP_002142605.1 197362968 1967961..1968569 1 NC_011147.1 similar to Salmonella typhi CT18 permease protein; undecaprenyl pyrophosphate phosphatase 1968569 554290001884 SSPA1767 Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyl pyrophosphate phosphatase YP_002142605.1 1967961 D 554290 CDS YP_002142606.1 197362969 1968641..1969399 1 NC_011147.1 similar to Salmonella typhi CT18 deoxyribose operon repressor; DNA-binding transcriptional repressor DeoR 1969399 554290001885 SSPA1768 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor DeoR YP_002142606.1 1968641 D 554290 CDS YP_002142607.1 197362970 complement(1969444..1970646) 1 NC_011147.1 'penicillin-binding protein 6a; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'; D-alanyl-D-alanine carboxypeptidase 1970646 554290001886 SSPA1769 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanyl-D-alanine carboxypeptidase YP_002142607.1 1969444 R 554290 CDS YP_002142608.1 197362971 1970890..1971516 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione s-transferase family protein; glutathione s-transferase family protein 1971516 554290001887 SSPA1770 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione s-transferase family protein YP_002142608.1 1970890 D 554290 CDS YP_002142609.1 197362972 complement(1971513..1972646) 1 NC_011147.1 similar to Salmonella typhi Ty2 oxidoreductase; oxidoreductase 1972646 554290001888 SSPA1771 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002142609.1 1971513 R 554290 CDS YP_002142610.1 197362973 complement(1972764..1973147) 1 NC_011147.1 'BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing'; biofilm formation regulatory protein BssR 1973147 bssR 554290001889 bssR Salmonella enterica subsp. enterica serovar Paratyphi A str. biofilm formation regulatory protein BssR YP_002142610.1 1972764 R 554290 CDS YP_002142611.1 197362974 1973378..1974703 1 NC_011147.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 1974703 rimO 554290001890 rimO Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S12 methylthiotransferase YP_002142611.1 1973378 D 554290 CDS YP_002142612.1 197362975 complement(1974794..1975705) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical ABC transporter permease protein; hypothetical protein 1975705 554290001891 SSPA1774 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142612.1 1974794 R 554290 CDS YP_002142613.1 197362976 complement(1975708..1976628) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical ABC transporter permease protein; hypothetical protein 1976628 554290001892 SSPA1775 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142613.1 1975708 R 554290 CDS YP_002142614.1 197362977 complement(1976689..1978227) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter periplasmic binding protein; ABC transporter substrate-binding protein 1978227 554290001893 SSPA1776 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter substrate-binding protein YP_002142614.1 1976689 R 554290 CDS YP_002142615.1 197362978 complement(1978260..1980131) 1 NC_011147.1 with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; glutathione transporter ATP-binding protein 1980131 554290001894 SSPA1777 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione transporter ATP-binding protein YP_002142615.1 1978260 R 554290 CDS YP_002142616.1 197362979 complement(1980142..1981026) 1 NC_011147.1 similar to Salmonella typhi CT18 L-asparaginase; L-asparaginase 1981026 554290001895 SSPA1778 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-asparaginase YP_002142616.1 1980142 R 554290 CDS YP_002142617.1 197362980 1981287..1982522 1 NC_011147.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 1982522 554290001896 SSPA1779 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin biosynthesis protein MoeA YP_002142617.1 1981287 D 554290 CDS YP_002142618.1 197362981 1982546..1983271 1 NC_011147.1 'ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase'; molybdopterin biosynthesis protein MoeB 1983271 554290001897 SSPA1780 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin biosynthesis protein MoeB YP_002142618.1 1982546 D 554290 CDS YP_002142619.1 197362982 1983549..1984448 1 NC_011147.1 similar to Salmonella typhi Ty2 pyruvate formate-lyase 3 activating enzyme; pyruvate formate-lyase 3 activating protein 1984448 554290001898 SSPA1781 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyruvate formate-lyase 3 activating protein YP_002142619.1 1983549 D 554290 CDS YP_002142620.1 197362983 1984454..1986886 1 NC_011147.1 similar to Salmonella typhi Ty2 formate acetyltransferase 3; formate acetyltransferase 3 1986886 554290001899 SSPA1782 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate acetyltransferase 3 YP_002142620.1 1984454 D 554290 CDS YP_002142621.1 197362984 complement(1986964..1987773) 1 NC_011147.1 similar to Salmonella typhimurium hydrolase of the HAD superfamily; hydrolase 1987773 554290001900 SSPA1783 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002142621.1 1986964 R 554290 CDS YP_002142622.1 197362985 1988035..1989300 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1989300 554290001901 SSPA1784 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142622.1 1988035 D 554290 CDS YP_002142623.1 197362986 complement(1989422..1990993) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 1990993 554290001902 SSPA1785 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142623.1 1989422 R 554290 CDS YP_002142624.1 197362987 1991237..1992157 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 1992157 554290001903 SSPA1786 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142624.1 1991237 D 554290 CDS YP_002142625.2 449784951 complement(1992201..1993313) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1993313 554290001904 SSPA1787 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142625.2 1992201 R 554290 CDS YP_002142626.1 197362989 complement(1993310..1993783) 1 NC_011147.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR 1993783 554290001905 SSPA1788 Salmonella enterica subsp. enterica serovar Paratyphi A str. manganese transport regulator MntR YP_002142626.1 1993310 R 554290 CDS YP_002142627.1 197362990 1994362..1995942 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1995942 554290001906 SSPA1789 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142627.1 1994362 D 554290 CDS YP_002142628.1 197362991 complement(1996005..1996520) 1 NC_011147.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 1996520 ompX 554290001907 ompX Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein X YP_002142628.1 1996005 R 554290 CDS YP_002142629.1 197362992 1998063..1998566 1 NC_011147.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 1998566 554290001909 SSPA1791 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA starvation/stationary phase protection protein Dps YP_002142629.1 1998063 D 554290 CDS YP_002142630.1 197362993 1999043..1999789 1 NC_011147.1 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter substrate-binding protein 1999789 glnH 554290001910 glnH Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamine ABC transporter substrate-binding protein YP_002142630.1 1999043 D 554290 CDS YP_002142631.1 197362994 1999935..2000594 1 NC_011147.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 2000594 glnP 554290001911 glnP Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamine ABC transporter permease YP_002142631.1 1999935 D 554290 CDS YP_002142632.1 197362995 2000591..2001313 1 NC_011147.1 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 2001313 glnQ 554290001912 glnQ Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamine ABC transporter ATP-binding protein YP_002142632.1 2000591 D 554290 CDS YP_002142633.1 197362996 2001432..2003654 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2003654 554290001913 SSPA1795 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142633.1 2001432 D 554290 CDS YP_002142634.1 197362997 complement(2003651..2004577) 1 NC_011147.1 similar to Salmonella typhimurium SAM-dependent methyltransferase; SAM-dependent methyltransferase 2004577 554290001914 SSPA1796 Salmonella enterica subsp. enterica serovar Paratyphi A str. SAM-dependent methyltransferase YP_002142634.1 2003651 R 554290 CDS YP_002142635.1 197362998 2004782..2005048 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical Zinc-finger containing protein; hypothetical protein 2005048 554290001915 SSPA1797 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142635.1 2004782 D 554290 CDS YP_002142636.1 197362999 2005206..2005346 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2005346 554290001916 SSPA1798 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142636.1 2005206 D 554290 CDS YP_002142637.1 197363000 2005333..2005593 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2005593 554290001917 SSPA1799 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142637.1 2005333 D 554290 CDS YP_002142638.1 197363001 complement(2005749..2006723) 1 NC_011147.1 similar to Salmonella typhimurium transferase; glycosyl transferase 2006723 554290001918 SSPA1800 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase YP_002142638.1 2005749 R 554290 CDS YP_002142639.2 449784952 complement(2006753..2008897) 1 NC_011147.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 2008897 dinG 554290001919 dinG Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent DNA helicase DinG YP_002142639.2 2006753 R 554290 CDS YP_002142640.1 197363003 complement(2009104..2010465) 1 NC_011147.1 this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE 2010465 554290001920 SSPA1802 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase RhlE YP_002142640.1 2009104 R 554290 CDS YP_002142641.1 197363004 2010695..2011369 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical tetR-family transcriptional regulator; DNA-binding transcriptional regulator 2011369 554290001921 SSPA1803 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002142641.1 2010695 D 554290 CDS YP_002142642.1 197363005 2011369..2012364 1 NC_011147.1 similar to Salmonella typhi CT18 HlyD-family secretion protein; hypothetical protein 2012364 554290001922 SSPA1804 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142642.1 2011369 D 554290 CDS YP_002142643.1 197363006 2012357..2014093 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; hypothetical protein 2014093 554290001923 SSPA1805 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142643.1 2012357 D 554290 CDS YP_002142644.1 197363007 2014086..2015216 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 2015216 554290001924 SSPA1806 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142644.1 2014086 D 554290 CDS YP_002142645.1 197363008 2015332..2016438 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 2016438 554290001925 SSPA1807 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002142645.1 2015332 D 554290 CDS YP_002142646.1 197363009 complement(2016400..2016810) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2016810 554290001926 SSPA1808 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142646.1 2016400 R 554290 CDS YP_002142647.1 197363010 2016943..2017701 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2017701 554290001927 SSPA1809 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142647.1 2016943 D 554290 CDS YP_002142648.1 197363011 2017698..2018939 1 NC_011147.1 similar to Salmonella typhi CT18 phospholipase; cardiolipin synthase 2 2018939 554290001928 SSPA1810 Salmonella enterica subsp. enterica serovar Paratyphi A str. cardiolipin synthase 2 YP_002142648.1 2017698 D 554290 CDS YP_002142649.1 197363012 2018939..2019901 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2019901 554290001929 SSPA1811 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142649.1 2018939 D 554290 CDS YP_002142650.1 197363013 complement(2020336..2021043) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2021043 554290001931 SSPA1813 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142650.1 2020336 R 554290 CDS YP_002142651.1 197363014 complement(2021190..2021894) 1 NC_011147.1 similar to Salmonella typhimurium permease; permease 2021894 554290001932 SSPA1814 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease YP_002142651.1 2021190 R 554290 CDS YP_002142652.1 197363015 complement(2021942..2022394) 1 NC_011147.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 2022394 moaE 554290001933 moaE Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_002142652.1 2021942 R 554290 CDS YP_002142653.1 197363016 complement(2022396..2022647) 1 NC_011147.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 2022647 moaD 554290001934 moaD Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin synthase small subunit YP_002142653.1 2022396 R 554290 CDS YP_002142654.1 197363017 complement(2022634..2023119) 1 NC_011147.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2023119 moaC 554290001935 moaC Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdenum cofactor biosynthesis protein MoaC YP_002142654.1 2022634 R 554290 CDS YP_002142655.1 197363018 complement(2023122..2023634) 1 NC_011147.1 similar to Salmonella typhi CT18 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 2023634 554290001936 SSPA1818 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdenum cofactor biosynthesis protein B YP_002142655.1 2023122 R 554290 CDS YP_002142656.1 197363019 complement(2023656..2024645) 1 NC_011147.1 'together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z'; molybdenum cofactor biosynthesis protein A 2024645 moaA 554290001937 moaA Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdenum cofactor biosynthesis protein A YP_002142656.1 2023656 R 554290 CDS YP_002142657.1 197363020 2025042..2025950 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2025950 554290001938 SSPA1820 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142657.1 2025042 D 554290 CDS YP_002142658.1 197363021 complement(2028318..2028491) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2028491 554290001940 SSPA1821 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142658.1 2028318 R 554290 CDS YP_002142659.1 197363022 complement(2028799..2030820) 1 NC_011147.1 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion'; excinuclease ABC subunit B 2030820 554290001941 SSPA1822 Salmonella enterica subsp. enterica serovar Paratyphi A str. excinuclease ABC subunit B YP_002142659.1 2028799 R 554290 CDS YP_002142660.1 197363023 complement(2031471..2032157) 1 NC_011147.1 'DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium'; dithiobiotin synthetase 2032157 bioD 554290001942 bioD Salmonella enterica subsp. enterica serovar Paratyphi A str. dithiobiotin synthetase YP_002142660.1 2031471 R 554290 CDS YP_002142661.1 197363024 complement(2032150..2032905) 1 NC_011147.1 'methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth'; biotin biosynthesis protein BioC 2032905 554290001943 SSPA1824 Salmonella enterica subsp. enterica serovar Paratyphi A str. biotin biosynthesis protein BioC YP_002142661.1 2032150 R 554290 CDS YP_002142662.1 197363025 complement(2032889..2034046) 1 NC_011147.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 2034046 554290001944 SSPA1825 Salmonella enterica subsp. enterica serovar Paratyphi A str. 8-amino-7-oxononanoate synthase YP_002142662.1 2032889 R 554290 CDS YP_002142663.1 197363026 complement(2034043..2035083) 1 NC_011147.1 similar to Salmonella typhi CT18 biotin synthetase; biotin synthetase 2035083 554290001945 SSPA1826 Salmonella enterica subsp. enterica serovar Paratyphi A str. biotin synthetase YP_002142663.1 2034043 R 554290 CDS YP_002142664.1 197363027 2035170..2036459 1 NC_011147.1 'catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate'; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2036459 554290001946 SSPA1827 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002142664.1 2035170 D 554290 CDS YP_002142665.1 197363028 2036517..2036993 1 NC_011147.1 YbhB; similar to rat and human kinase inhibitory proteins; kinase inhibitor protein 2036993 554290001947 SSPA1828 Salmonella enterica subsp. enterica serovar Paratyphi A str. kinase inhibitor protein YP_002142665.1 2036517 D 554290 CDS YP_002142666.1 197363029 complement(2037078..2038598) 1 NC_011147.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 2038598 554290001948 SSPA1829 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine ammonia-lyase YP_002142666.1 2037078 R 554290 CDS YP_002142667.1 197363030 complement(2040482..2041159) 1 NC_011147.1 similar to Salmonella typhi CT18 histidine utilization repressor; histidine utilization repressor 2041159 554290001950 SSPA1830 Salmonella enterica subsp. enterica serovar Paratyphi A str. histidine utilization repressor YP_002142667.1 2040482 R 554290 CDS YP_002142668.1 197363031 complement(2041252..2042193) 1 NC_011147.1 catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase 2042193 554290001951 SSPA1831 Salmonella enterica subsp. enterica serovar Paratyphi A str. formimidoylglutamase YP_002142668.1 2041252 R 554290 CDS YP_002142669.1 197363032 complement(2042190..2043413) 1 NC_011147.1 'catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway'; imidazolonepropionase 2043413 554290001952 SSPA1832 Salmonella enterica subsp. enterica serovar Paratyphi A str. imidazolonepropionase YP_002142669.1 2042190 R 554290 CDS YP_002142670.1 197363033 2043651..2044934 1 NC_011147.1 outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family; pectinesterase 2044934 554290001953 SSPA1833 Salmonella enterica subsp. enterica serovar Paratyphi A str. pectinesterase YP_002142670.1 2043651 D 554290 CDS YP_002142671.1 197363034 complement(2045078..2046073) 1 NC_011147.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 2046073 554290001954 SSPA1834 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-phosphogluconolactonase YP_002142671.1 2045078 R 554290 CDS YP_002142672.1 197363035 2046237..2047055 1 NC_011147.1 'YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily'; phosphotransferase 2047055 554290001955 SSPA1835 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphotransferase YP_002142672.1 2046237 D 554290 CDS YP_002142673.1 197363036 complement(2047056..2048114) 1 NC_011147.1 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 2048114 modC 554290001956 modC Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdate transporter ATP-binding protein YP_002142673.1 2047056 R 554290 CDS YP_002142674.1 197363037 complement(2048117..2048806) 1 NC_011147.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 2048806 modB 554290001957 modB Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdate ABC transporter permease YP_002142674.1 2048117 R 554290 CDS YP_002142675.1 197363038 complement(2048806..2049579) 1 NC_011147.1 with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 2049579 modA 554290001958 modA Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdate transporter periplasmic protein YP_002142675.1 2048806 R 554290 CDS YP_002142676.1 197363039 complement(2049746..2049997) 1 NC_011147.1 hypothetical protein 2049997 ybhT 554290001959 ybhT Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142676.1 2049746 R 554290 CDS YP_002142677.1 197363040 2050024..2050812 1 NC_011147.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 2050812 554290001960 SSPA1840 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator ModE YP_002142677.1 2050024 D 554290 CDS YP_002142678.1 197363041 2050880..2052355 1 NC_011147.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF 2052355 554290001961 SSPA1841 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdenum transport ATP-binding protein ModF YP_002142678.1 2050880 D 554290 CDS YP_002142679.1 197363042 2052526..2053434 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2053434 554290001962 SSPA1842 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142679.1 2052526 D 554290 CDS YP_002142680.1 197363043 2053657..2054673 1 NC_011147.1 similar to Salmonella typhi CT18 UDP-glucose 4-epimerase; UDP-galactose-4-epimerase 2054673 554290001963 SSPA1843 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-galactose-4-epimerase YP_002142680.1 2053657 D 554290 CDS YP_002142681.1 197363044 2054684..2055730 1 NC_011147.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 2055730 554290001964 SSPA1844 Salmonella enterica subsp. enterica serovar Paratyphi A str. galactose-1-phosphate uridylyltransferase YP_002142681.1 2054684 D 554290 CDS YP_002142682.1 197363045 2055733..2056881 1 NC_011147.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 2056881 554290001965 SSPA1845 Salmonella enterica subsp. enterica serovar Paratyphi A str. galactokinase YP_002142682.1 2055733 D 554290 CDS YP_002142683.1 197363046 2056875..2057915 1 NC_011147.1 'catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose'; aldose 1-epimerase 2057915 galM 554290001966 galM Salmonella enterica subsp. enterica serovar Paratyphi A str. aldose 1-epimerase YP_002142683.1 2056875 D 554290 CDS YP_002142684.1 197363047 2058139..2058891 1 NC_011147.1 '2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate'; phosphoglyceromutase 2058891 gpmA 554290001967 gpmA Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglyceromutase YP_002142684.1 2058139 D 554290 CDS YP_002142685.1 197363048 complement(2058982..2059758) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2059758 554290001968 SSPA1848 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142685.1 2058982 R 554290 CDS YP_002142686.1 197363049 complement(2059758..2060837) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter permease (FecCD_family); ABC transporter permease 2060837 554290001969 SSPA1849 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter permease YP_002142686.1 2059758 R 554290 CDS YP_002142687.1 197363050 complement(2060990..2062042) 1 NC_011147.1 'catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive'; phospho-2-dehydro-3-deoxyheptonate aldolase 2062042 554290001970 SSPA1850 Salmonella enterica subsp. enterica serovar Paratyphi A str. phospho-2-dehydro-3-deoxyheptonate aldolase YP_002142687.1 2060990 R 554290 CDS YP_002142688.1 197363051 2062362..2062748 1 NC_011147.1 hypothetical protein 2062748 554290001971 SSPA1851 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142688.1 2062362 D 554290 CDS YP_002142689.1 197363052 2062859..2063797 1 NC_011147.1 involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB 2063797 554290001972 SSPA1852 Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc transporter ZitB YP_002142689.1 2062859 D 554290 CDS YP_002142690.1 197363053 complement(2063794..2064513) 1 NC_011147.1 similar to Salmonella typhi CT18 pnuC protein; pnuC protein 2064513 554290001973 SSPA1853 Salmonella enterica subsp. enterica serovar Paratyphi A str. pnuC protein YP_002142690.1 2063794 R 554290 CDS YP_002142691.1 197363054 complement(2064538..2065581) 1 NC_011147.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2065581 554290001974 SSPA1854 Salmonella enterica subsp. enterica serovar Paratyphi A str. quinolinate synthetase YP_002142691.1 2064538 R 554290 CDS YP_002142692.1 197363055 complement(2067090..2067878) 1 NC_011147.1 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF 2067878 554290001980 SSPA1855 Salmonella enterica subsp. enterica serovar Paratyphi A str. tol-pal system protein YbgF YP_002142692.1 2067090 R 554290 CDS YP_002142693.1 197363056 complement(2067888..2068412) 1 NC_011147.1 similar to Salmonella typhi CT18 peptidoglycan-associated lipoprotein precursor; peptidoglycan-associated outer membrane lipoprotein 2068412 554290001981 SSPA1856 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidoglycan-associated outer membrane lipoprotein YP_002142693.1 2067888 R 554290 CDS YP_002142694.1 197363057 complement(2068447..2069739) 1 NC_011147.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 2069739 tolB 554290001982 tolB Salmonella enterica subsp. enterica serovar Paratyphi A str. translocation protein TolB YP_002142694.1 2068447 R 554290 CDS YP_002142695.1 197363058 complement(2069863..2071032) 1 NC_011147.1 'inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins'; cell envelope integrity inner membrane protein TolA 2071032 tolA 554290001983 tolA Salmonella enterica subsp. enterica serovar Paratyphi A str. cell envelope integrity inner membrane protein TolA YP_002142695.1 2069863 R 554290 CDS YP_002142696.1 197363059 complement(2071097..2071525) 1 NC_011147.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 2071525 554290001984 SSPA1859 Salmonella enterica subsp. enterica serovar Paratyphi A str. colicin uptake protein TolR YP_002142696.1 2071097 R 554290 CDS YP_002142697.1 197363060 complement(2071529..2072221) 1 NC_011147.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 2072221 554290001985 SSPA1860 Salmonella enterica subsp. enterica serovar Paratyphi A str. colicin uptake protein TolQ YP_002142697.1 2071529 R 554290 CDS YP_002142698.1 197363061 complement(2072218..2072622) 1 NC_011147.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC 2072622 554290001986 SSPA1861 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl-CoA thioester hydrolase YbgC YP_002142698.1 2072218 R 554290 CDS YP_002142699.1 197363062 complement(2072851..2073132) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2073132 554290001987 SSPA1862 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142699.1 2072851 R 554290 CDS YP_002142700.1 197363063 complement(2073344..2073457) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2073457 554290001988 SSPA1863 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142700.1 2073344 R 554290 CDS YP_002142701.1 197363064 complement(2073472..2074611) 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 2074611 554290001989 SSPA1864 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome d ubiquinol oxidase subunit II YP_002142701.1 2073472 R 554290 CDS YP_002142702.1 197363065 complement(2074627..2076195) 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome d ubiquinol oxidase subunit I; cytochrome d ubiquinol oxidase subunit I 2076195 554290001990 SSPA1865 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome d ubiquinol oxidase subunit I YP_002142702.1 2074627 R 554290 CDS YP_002142703.1 197363066 complement(2077781..2078650) 1 NC_011147.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 2078650 554290001991 SSPA1866 Salmonella enterica subsp. enterica serovar Paratyphi A str. succinyl-CoA synthetase subunit alpha YP_002142703.1 2077781 R 554290 CDS YP_002142704.1 197363067 complement(2078650..2079816) 1 NC_011147.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2079816 sucC 554290001992 sucC Salmonella enterica subsp. enterica serovar Paratyphi A str. succinyl-CoA synthetase subunit beta YP_002142704.1 2078650 R 554290 CDS YP_002142705.1 197363068 complement(2079958..2081166) 1 NC_011147.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 2081166 554290001993 SSPA1868 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydrolipoamide succinyltransferase YP_002142705.1 2079958 R 554290 CDS YP_002142706.1 197363069 complement(2081181..2083982) 1 NC_011147.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2083982 sucA 554290001994 sucA Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-oxoglutarate dehydrogenase E1 component YP_002142706.1 2081181 R 554290 CDS YP_002142707.1 197363070 complement(2084508..2085227) 1 NC_011147.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2085227 sdhB 554290001995 sdhB Salmonella enterica subsp. enterica serovar Paratyphi A str. succinate dehydrogenase iron-sulfur subunit YP_002142707.1 2084508 R 554290 CDS YP_002142708.1 197363071 complement(2085241..2087007) 1 NC_011147.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2087007 sdhA 554290001996 sdhA Salmonella enterica subsp. enterica serovar Paratyphi A str. succinate dehydrogenase flavoprotein subunit YP_002142708.1 2085241 R 554290 CDS YP_002142709.1 197363072 complement(2087007..2087354) 1 NC_011147.1 similar to Salmonella typhi CT18 succinate dehydrogenase hydrophobic membrane anchor protein; succinate dehydrogenase cytochrome b556 small membrane subunit 2087354 sdhD 554290001997 sdhD Salmonella enterica subsp. enterica serovar Paratyphi A str. succinate dehydrogenase cytochrome b556 small membrane subunit YP_002142709.1 2087007 R 554290 CDS YP_002142710.1 197363073 complement(2087348..2087737) 1 NC_011147.1 similar to Salmonella typhi CT18 succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase cytochrome b556 large membrane subunit 2087737 sdhC 554290001998 sdhC Salmonella enterica subsp. enterica serovar Paratyphi A str. succinate dehydrogenase cytochrome b556 large membrane subunit YP_002142710.1 2087348 R 554290 CDS YP_002142711.1 197363074 complement(2088146..2088391) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2088391 554290001999 SSPA1874 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142711.1 2088146 R 554290 CDS YP_002142712.1 197363075 2088492..2089775 1 NC_011147.1 'type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH'; type II citrate synthase 2089775 gltA 554290002000 gltA Salmonella enterica subsp. enterica serovar Paratyphi A str. type II citrate synthase YP_002142712.1 2088492 D 554290 CDS YP_002142713.2 449784953 2089912..2090958 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2090958 554290002001 SSPA1876 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142713.2 2089912 D 554290 CDS YP_002142714.1 197363077 complement(2091013..2091804) 1 NC_011147.1 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII 2091804 554290002002 SSPA1877 Salmonella enterica subsp. enterica serovar Paratyphi A str. endonuclease VIII YP_002142714.1 2091013 R 554290 CDS YP_002142715.1 197363078 complement(2091853..2091990) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2091990 554290002003 SSPA1878 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142715.1 2091853 R 554290 CDS YP_002142716.1 197363079 complement(2092058..2094007) 1 NC_011147.1 similar to Salmonella typhimurium glycosyl transferase; glycosyl transferase family protein 2094007 554290002004 SSPA1879 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002142716.1 2092058 R 554290 CDS YP_002142717.1 197363080 complement(2094011..2094844) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2094844 554290002005 SSPA1880 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142717.1 2094011 R 554290 CDS YP_002142718.1 197363081 complement(2095037..2096815) 1 NC_011147.1 'similar to Salmonella typhimurium glycosyltransferase, cell wall biogenesis'; glycosyltransferase 2096815 554290002006 SSPA1881 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyltransferase YP_002142718.1 2095037 R 554290 CDS YP_002142719.1 197363082 complement(2096909..2097619) 1 NC_011147.1 similar to Salmonella typhi CT18 polysaccharide export ABC transporter ATP-binding protein; polysaccharide export ABC transporter ATP-binding protein 2097619 554290002007 SSPA1882 Salmonella enterica subsp. enterica serovar Paratyphi A str. polysaccharide export ABC transporter ATP-binding protein YP_002142719.1 2096909 R 554290 CDS YP_002142720.1 197363083 complement(2097623..2098393) 1 NC_011147.1 'Similarity: STY0762 (Typhi pseudogene); Similarity: Q8ZQV2_SALTY Q8ZQV2 ABC transporter permease protein. Score = 1321 (470.1 bits),Expect = 6.8e-134, P = 6.8e-134 Identities = 254/256 (99%), Positives = 255/256 (99%)'; polysaccharide export ABC transporter permease 2098393 554290002008 SSPA1882a Salmonella enterica subsp. enterica serovar Paratyphi A str. polysaccharide export ABC transporter permease YP_002142720.1 2097623 R 554290 CDS YP_002142721.1 197363084 complement(2098522..2099655) 1 NC_011147.1 similar to Salmonella typhi CT18 galactosyltransferase; galactosyltransferase 2099655 554290002009 SSPA1883 Salmonella enterica subsp. enterica serovar Paratyphi A str. galactosyltransferase YP_002142721.1 2098522 R 554290 CDS YP_002142722.1 197363085 complement(2100560..2101738) 1 NC_011147.1 similar to Salmonella typhi CT18 UDP-galactopyranose mutase; UDP-galactopyranose mutase 2101738 554290002010 SSPA1884 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-galactopyranose mutase YP_002142722.1 2100560 R 554290 CDS YP_002142723.1 197363086 complement(2101997..2102737) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2102737 554290002011 SSPA1885 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142723.1 2101997 R 554290 CDS YP_002142724.1 197363087 complement(2103533..2104099) 1 NC_011147.1 similar to Salmonella typhi CT18 probable DNA recombinase; DNA recombinase 2104099 554290002013 SSPA1886 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA recombinase YP_002142724.1 2103533 R 554290 CDS YP_002142725.1 197363088 complement(2104159..2104290) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2104290 554290002014 SSPA1887 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142725.1 2104159 R 554290 CDS YP_002142726.1 197363089 complement(2104613..2105347) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; LamB/YcsF family protein 2105347 554290002015 SSPA1888 Salmonella enterica subsp. enterica serovar Paratyphi A str. LamB/YcsF family protein YP_002142726.1 2104613 R 554290 CDS YP_002142727.1 197363090 complement(2105337..2106269) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2106269 554290002016 SSPA1889 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142727.1 2105337 R 554290 CDS YP_002142728.1 197363091 complement(2106263..2106919) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2106919 554290002017 SSPA1890 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142728.1 2106263 R 554290 CDS YP_002142729.1 197363092 complement(2106935..2107678) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hydrolase-oxidase 2107678 554290002018 SSPA1891 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase-oxidase YP_002142729.1 2106935 R 554290 CDS YP_002142730.1 197363093 2108007..2109488 1 NC_011147.1 similar to Salmonella typhi CT18 PTR2-family transport protein; PTR2-family transport protein 2109488 554290002019 SSPA1892 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTR2-family transport protein YP_002142730.1 2108007 D 554290 CDS YP_002142731.1 197363094 complement(2109527..2110948) 1 NC_011147.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 2110948 554290002020 SSPA1893 Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxyribodipyrimidine photolyase YP_002142731.1 2109527 R 554290 CDS YP_002142732.1 197363095 complement(2111059..2111265) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2111265 554290002021 SSPA1894 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142732.1 2111059 R 554290 CDS YP_002142733.1 197363096 2111494..2111691 1 NC_011147.1 hypothetical protein 2111691 554290002022 SSPA1895 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142733.1 2111494 D 554290 CDS YP_002142734.1 197363097 2111691..2113370 1 NC_011147.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 2113370 554290002023 SSPA1896 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium-transporting ATPase subunit A YP_002142734.1 2111691 D 554290 CDS YP_002142735.1 197363098 2113391..2115439 1 NC_011147.1 'One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions'; potassium-transporting ATPase subunit B 2115439 554290002024 SSPA1897 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium-transporting ATPase subunit B YP_002142735.1 2113391 D 554290 CDS YP_002142736.1 197363099 2115445..2116032 1 NC_011147.1 'One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex'; potassium-transporting ATPase subunit C 2116032 554290002025 SSPA1898 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium-transporting ATPase subunit C YP_002142736.1 2115445 D 554290 CDS YP_002142737.1 197363100 2116029..2118713 1 NC_011147.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 2118713 554290002026 SSPA1899 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor protein KdpD YP_002142737.1 2116029 D 554290 CDS YP_002142738.1 197363101 2118710..2119387 1 NC_011147.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 2119387 554290002027 SSPA1900 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator KdpE YP_002142738.1 2118710 D 554290 CDS YP_002142739.1 197363102 2120150..2122348 1 NC_011147.1 'similar to Salmonella typhimurium ornithine decarboxylase isozyme, inducible'; ornithine decarboxylase 2122348 554290002028 SSPA1901 Salmonella enterica subsp. enterica serovar Paratyphi A str. ornithine decarboxylase YP_002142739.1 2120150 D 554290 CDS YP_002142740.1 197363103 2122345..2123664 1 NC_011147.1 'catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system'; putrescine transporter 2123664 potE 554290002029 potE Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine transporter YP_002142740.1 2122345 D 554290 CDS YP_002142741.1 197363104 2123729..2124214 1 NC_011147.1 similar to Salmonella typhi CT18 possible 5-nitroimidazole antibiotic resistance; 5-nitroimidazole antibiotic resistance 2124214 554290002030 SSPA1903 Salmonella enterica subsp. enterica serovar Paratyphi A str. 5-nitroimidazole antibiotic resistance YP_002142741.1 2123729 D 554290 CDS YP_002142742.1 197363105 complement(2124329..2125969) 1 NC_011147.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2125969 554290002031 SSPA1904 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglucomutase YP_002142742.1 2124329 R 554290 CDS YP_002142743.1 197363106 complement(2125994..2126536) 1 NC_011147.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 2126536 554290002032 SSPA1905 Salmonella enterica subsp. enterica serovar Paratyphi A str. replication initiation regulator SeqA YP_002142743.1 2125994 R 554290 CDS YP_002142744.1 197363107 2126721..2127491 1 NC_011147.1 similar to Salmonella typhi CT18 esterase/lipase YbfF; hypothetical protein 2127491 554290002033 SSPA1906 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142744.1 2126721 D 554290 CDS YP_002142745.1 197363108 2127625..2127918 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; LexA regulated protein 2127918 554290002034 SSPA1907 Salmonella enterica subsp. enterica serovar Paratyphi A str. LexA regulated protein YP_002142745.1 2127625 D 554290 CDS YP_002142746.1 197363109 2128069..2128599 1 NC_011147.1 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group'; flavodoxin FldA 2128599 554290002035 SSPA1908 Salmonella enterica subsp. enterica serovar Paratyphi A str. flavodoxin FldA YP_002142746.1 2128069 D 554290 CDS YP_002142747.1 197363110 2128881..2129333 1 NC_011147.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 2129333 fur 554290002036 fur Salmonella enterica subsp. enterica serovar Paratyphi A str. ferric uptake regulator YP_002142747.1 2128881 D 554290 CDS YP_002142748.1 197363111 2129448..2130374 1 NC_011147.1 similar to Salmonella typhi CT18 lysR-family transcriptional regulator; LysR family transcriptional regulator 2130374 554290002037 SSPA1910 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002142748.1 2129448 D 554290 CDS YP_002142749.1 197363112 2130472..2131875 1 NC_011147.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 2131875 554290002038 SSPA1911 Salmonella enterica subsp. enterica serovar Paratyphi A str. tricarballylate dehydrogenase YP_002142749.1 2130472 D 554290 CDS YP_002142750.1 197363113 2131862..2133001 1 NC_011147.1 citB-like protein 2133001 554290002039 SSPA1912 Salmonella enterica subsp. enterica serovar Paratyphi A str. citB-like protein YP_002142750.1 2131862 D 554290 CDS YP_002142751.1 197363114 2133052..2134356 1 NC_011147.1 similar to Salmonella typhi CT18 citrate-proton symporter; citrate-proton symporter 2134356 554290002040 SSPA1913 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate-proton symporter YP_002142751.1 2133052 D 554290 CDS YP_002142752.1 197363115 complement(2134405..2134737) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 2134737 554290002041 SSPA1914 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142752.1 2134405 R 554290 CDS YP_002142753.1 197363116 complement(2134787..2136193) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 2136193 554290002042 SSPA1915 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142753.1 2134787 R 554290 CDS YP_002142754.1 197363117 complement(2136854..2138521) 1 NC_011147.1 'catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; glutaminyl-tRNA synthetase 2138521 554290002043 SSPA1916 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutaminyl-tRNA synthetase YP_002142754.1 2136854 R 554290 CDS YP_002142755.1 197363118 complement(2138732..2140684) 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system N-acetyl glucosamine specific transporter subunit IIABC 2140684 554290002044 SSPA1917 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system N-acetyl glucosamine specific transporter subunit IIABC YP_002142755.1 2138732 R 554290 CDS YP_002142756.1 197363119 2141011..2141811 1 NC_011147.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 2141811 nagB 554290002045 nagB Salmonella enterica subsp. enterica serovar Paratyphi A str. glucosamine-6-phosphate deaminase YP_002142756.1 2141011 D 554290 CDS YP_002142757.1 197363120 2141871..2143025 1 NC_011147.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 2143025 nagA 554290002046 nagA Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylglucosamine-6-phosphate deacetylase YP_002142757.1 2141871 D 554290 CDS YP_002142758.1 197363121 2143030..2144250 1 NC_011147.1 similar to Salmonella typhi CT18 N-acetylglucosamine repressor; N-acetylglucosamine repressor 2144250 554290002047 SSPA1920 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylglucosamine repressor YP_002142758.1 2143030 D 554290 CDS YP_002142759.1 197363122 2144297..2145049 1 NC_011147.1 similar to Salmonella typhi CT18 NagD protein; UMP phosphatase 2145049 554290002048 SSPA1921 Salmonella enterica subsp. enterica serovar Paratyphi A str. UMP phosphatase YP_002142759.1 2144297 D 554290 CDS YP_002142760.1 197363123 2145339..2147003 1 NC_011147.1 'functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP'; asparagine synthetase B 2147003 asnB 554290002049 asnB Salmonella enterica subsp. enterica serovar Paratyphi A str. asparagine synthetase B YP_002142760.1 2145339 D 554290 CDS YP_002142761.1 197363124 complement(2148066..2149241) 1 NC_011147.1 'catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q'; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 2149241 ubiF 554290002057 ubiF Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_002142761.1 2148066 R 554290 CDS YP_002142762.1 197363125 2149343..2150809 1 NC_011147.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2150809 554290002058 SSPA1923 Salmonella enterica subsp. enterica serovar Paratyphi A str. (dimethylallyl)adenosine tRNA methylthiotransferase YP_002142762.1 2149343 D 554290 CDS YP_002142763.1 197363126 2150975..2152060 1 NC_011147.1 similar to Salmonella typhi Ty2 PhoH-like ATP-binding protein; PhoH-like ATP-binding protein 2152060 554290002059 SSPA1924 Salmonella enterica subsp. enterica serovar Paratyphi A str. PhoH-like ATP-binding protein YP_002142763.1 2150975 D 554290 CDS YP_002142764.1 197363127 2152057..2152530 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; metalloprotease 2152530 554290002060 SSPA1925 Salmonella enterica subsp. enterica serovar Paratyphi A str. metalloprotease YP_002142764.1 2152057 D 554290 CDS YP_002142765.1 197363128 2152688..2153566 1 NC_011147.1 similar to Salmonella typhi CT18 haemolysin-related protein; hemolysin-like protein 2153566 554290002061 SSPA1926 Salmonella enterica subsp. enterica serovar Paratyphi A str. hemolysin-like protein YP_002142765.1 2152688 D 554290 CDS YP_002142766.1 197363129 2153586..2155124 1 NC_011147.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2155124 lnt 554290002062 lnt Salmonella enterica subsp. enterica serovar Paratyphi A str. apolipoprotein N-acyltransferase YP_002142766.1 2153586 D 554290 CDS YP_002142767.1 197363130 2155461..2156387 1 NC_011147.1 similar to Salmonella typhi Ty2 ABC transporter periplasmic binding protein; glutamate and aspartate transporter subunit 2156387 554290002063 SSPA1928 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate and aspartate transporter subunit YP_002142767.1 2155461 D 554290 CDS YP_002142768.1 197363131 2157287..2157961 1 NC_011147.1 similar to Salmonella typhi CT18 glutamate/aspartate transport system permease protein GltK; glutamate/aspartate transport system permease GltK 2157961 554290002065 SSPA1929 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate/aspartate transport system permease GltK YP_002142768.1 2157287 D 554290 CDS YP_002142769.1 197363132 2157961..2158686 1 NC_011147.1 similar to Salmonella typhi CT18 glutamate/aspartate transport ATP-binding protein GltL; glutamate/aspartate transport ATP-binding protein GltL 2158686 554290002066 SSPA1930 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate/aspartate transport ATP-binding protein GltL YP_002142769.1 2157961 D 554290 CDS YP_002142770.1 197363133 2158803..2159738 1 NC_011147.1 'Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific'; ribonucleoside hydrolase 1 2159738 rihA 554290002067 rihA Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleoside hydrolase 1 YP_002142770.1 2158803 D 554290 CDS YP_002142771.1 197363134 2159770..2160321 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2160321 554290002068 SSPA1932 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142771.1 2159770 D 554290 CDS YP_002142772.1 197363135 complement(2160609..2161082) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2161082 554290002069 SSPA1933 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142772.1 2160609 R 554290 CDS YP_002142773.1 197363136 complement(2161175..2163103) 1 NC_011147.1 similar to Salmonella typhi CT18 sigma-54 dependent transcriptional regulator; sigma-54 dependent transcriptional regulator 2163103 554290002070 SSPA1934 Salmonella enterica subsp. enterica serovar Paratyphi A str. sigma-54 dependent transcriptional regulator YP_002142773.1 2161175 R 554290 CDS YP_002142774.1 197363137 complement(2163171..2164124) 1 NC_011147.1 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 2164124 554290002071 SSPA1935 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-keto-3-deoxygluconate permease YP_002142774.1 2163171 R 554290 CDS YP_002142775.1 197363138 complement(2164174..2165346) 1 NC_011147.1 C-terminus; similar to Salmonella typhi CT18 hydrolase. C-terminus.; truncated hydrolase 2165346 554290002072 SSPA1936 Salmonella enterica subsp. enterica serovar Paratyphi A str. truncated hydrolase YP_002142775.1 2164174 R 554290 CDS YP_002142776.1 197363139 complement(2165363..2165704) 1 NC_011147.1 N-terminus; similar to Salmonella typhi CT18 hydrolase N-terminus; truncated hydrolase 2165704 554290002073 SSPA1937 Salmonella enterica subsp. enterica serovar Paratyphi A str. truncated hydrolase YP_002142776.1 2165363 R 554290 CDS YP_002142777.1 197363140 2165941..2168523 1 NC_011147.1 'leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase'; leucyl-tRNA synthetase 2168523 leuS 554290002074 leuS Salmonella enterica subsp. enterica serovar Paratyphi A str. leucyl-tRNA synthetase YP_002142777.1 2165941 D 554290 CDS YP_002142778.1 197363141 2168538..2169128 1 NC_011147.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 2169128 554290002075 SSPA1939 Salmonella enterica subsp. enterica serovar Paratyphi A str. LPS-assembly lipoprotein RlpB YP_002142778.1 2168538 D 554290 CDS YP_002142779.1 197363142 2169128..2170159 1 NC_011147.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 2170159 holA 554290002076 holA Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit delta YP_002142779.1 2169128 D 554290 CDS YP_002142780.1 197363143 2170161..2170802 1 NC_011147.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 2170802 nadD 554290002077 nadD Salmonella enterica subsp. enterica serovar Paratyphi A str. nicotinic acid mononucleotide adenylyltransferase YP_002142780.1 2170161 D 554290 CDS YP_002142781.1 197363144 complement(2170777..2171871) 1 NC_011147.1 'cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase'; threonine-phosphate decarboxylase 2171871 554290002078 SSPA1942 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonine-phosphate decarboxylase YP_002142781.1 2170777 R 554290 CDS YP_002142782.1 197363145 2171968..2172576 1 NC_011147.1 similar to Salmonella typhi CT18 alpha-ribazole-5'-phosphate phosphatase; alpha-ribazole-5'-phosphate phosphatase 2172576 554290002079 SSPA1943 Salmonella enterica subsp. enterica serovar Paratyphi A str. alpha-ribazole-5'-phosphate phosphatase YP_002142782.1 2171968 D 554290 CDS YP_002142783.1 197363146 2172904..2173221 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2173221 554290002080 SSPA1944 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142783.1 2172904 D 554290 CDS YP_002142784.1 197363147 2173225..2173692 1 NC_011147.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2173692 554290002081 SSPA1945 Salmonella enterica subsp. enterica serovar Paratyphi A str. rRNA large subunit methyltransferase YP_002142784.1 2173225 D 554290 CDS YP_002142785.1 197363148 2173723..2175624 1 NC_011147.1 similar to Salmonella typhi Ty2 penicillin-binding protein 2; penicillin-binding protein 2 2175624 554290002082 SSPA1946 Salmonella enterica subsp. enterica serovar Paratyphi A str. penicillin-binding protein 2 YP_002142785.1 2173723 D 554290 CDS YP_002142786.1 197363149 2175627..2176739 1 NC_011147.1 similar to Salmonella typhi CT18 rod shape-determining protein RodA; cell wall shape-determining protein 2176739 554290002083 SSPA1947 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell wall shape-determining protein YP_002142786.1 2175627 D 554290 CDS YP_002142787.1 197363150 2176750..2177883 1 NC_011147.1 similar to Salmonella typhi CT18 rare lipoprotein A precursor; rare lipoprotein A 2177883 554290002084 SSPA1948 Salmonella enterica subsp. enterica serovar Paratyphi A str. rare lipoprotein A YP_002142787.1 2176750 D 554290 CDS YP_002142788.1 197363151 2178023..2179234 1 NC_011147.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase 2179234 554290002085 SSPA1949 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanyl-D-alanine carboxypeptidase YP_002142788.1 2178023 D 554290 CDS YP_002142789.1 197363152 2179342..2179605 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2179605 554290002086 SSPA1950 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142789.1 2179342 D 554290 CDS YP_002142790.2 449784954 2179705..2180346 1 NC_011147.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 2180346 lipB 554290002087 lipB Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoate-protein ligase B YP_002142790.2 2179705 D 554290 CDS YP_002142791.1 197363154 2180648..2181601 1 NC_011147.1 similar to Salmonella typhi CT18 lysR-family transcriptional regulator; DNA-binding transcriptional regulator 2181601 554290002088 SSPA1952 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002142791.1 2180648 D 554290 CDS YP_002142792.1 197363155 2181807..2182772 1 NC_011147.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2182772 554290002089 SSPA1953 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoyl synthase YP_002142792.1 2181807 D 554290 CDS YP_002142793.1 197363156 complement(2182858..2183061) 1 NC_011147.1 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein E 2183061 tatE 554290002090 tatE Salmonella enterica subsp. enterica serovar Paratyphi A str. twin arginine translocase protein E YP_002142793.1 2182858 R 554290 CDS YP_002142794.1 197363157 complement(2183190..2183978) 1 NC_011147.1 similar to Salmonella typhimurium hydrolase; hydrolase 2183978 554290002091 SSPA1955 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002142794.1 2183190 R 554290 CDS YP_002142795.1 197363158 2184069..2184452 1 NC_011147.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2184452 554290002092 SSPA1956 Salmonella enterica subsp. enterica serovar Paratyphi A str. camphor resistance protein CrcB YP_002142795.1 2184069 D 554290 CDS YP_002142796.1 197363159 complement(2184510..2184719) 1 NC_011147.1 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 2184719 cspE 554290002093 cspE Salmonella enterica subsp. enterica serovar Paratyphi A str. cold shock protein CspE YP_002142796.1 2184510 R 554290 CDS YP_002142797.1 197363160 complement(2184907..2185479) 1 NC_011147.1 catalyzes the transfer of palmitate to lipid A; palmitoyl transferase 2185479 pagP 554290002094 pagP Salmonella enterica subsp. enterica serovar Paratyphi A str. palmitoyl transferase YP_002142797.1 2184907 R 554290 CDS YP_002142798.2 449784955 2185858..2187243 1 NC_011147.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 2187243 dcuC 554290002095 dcuC Salmonella enterica subsp. enterica serovar Paratyphi A str. C4-dicarboxylate transporter DcuC YP_002142798.2 2185858 D 554290 CDS YP_002142799.1 197363162 complement(2187297..2187977) 1 NC_011147.1 regulates the expression of citAB in citrate fermentation; two-component response regulator DpiA 2187977 dpiA 554290002096 dpiA Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component response regulator DpiA YP_002142799.1 2187297 R 554290 CDS YP_002142800.1 197363163 2190043..2191068 1 NC_011147.1 similar to Salmonella typhi CT18 [citrate (pro-3S)-lyase] ligase; [citrate (pro-3S)-lyase] ligase 2191068 554290002098 SSPA1961 Salmonella enterica subsp. enterica serovar Paratyphi A str. [citrate (pro-3S)-lyase] ligase YP_002142800.1 2190043 D 554290 CDS YP_002142801.1 197363164 2191065..2191361 1 NC_011147.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 2191361 554290002099 SSPA1962 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate lyase subunit gamma YP_002142801.1 2191065 D 554290 CDS YP_002142802.1 197363165 2191358..2192266 1 NC_011147.1 similar to Salmonella typhi CT18 citrate lyase beta chain; citrate lyase subunit beta 2192266 554290002100 SSPA1963 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate lyase subunit beta YP_002142802.1 2191358 D 554290 CDS YP_002142803.1 197363166 2192276..2193805 1 NC_011147.1 similar to Salmonella typhi CT18 citrate lyase alpha chain; citrate lyase subunit alpha 2193805 554290002101 SSPA1964 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate lyase subunit alpha YP_002142803.1 2192276 D 554290 CDS YP_002142804.2 449784956 2193809..2194360 1 NC_011147.1 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 2194360 citX 554290002102 citX Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_002142804.2 2193809 D 554290 CDS YP_002142805.1 197363168 2194332..2195228 1 NC_011147.1 catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase 2195228 citG 554290002103 citG Salmonella enterica subsp. enterica serovar Paratyphi A str. triphosphoribosyl-dephospho-CoA synthase YP_002142805.1 2194332 D 554290 CDS YP_002142806.1 197363169 2195266..2196771 1 NC_011147.1 similar to Salmonella typhi CT18 citrate carrier; citrate carrier 2196771 554290002104 SSPA1967 Salmonella enterica subsp. enterica serovar Paratyphi A str. citrate carrier YP_002142806.1 2195266 D 554290 CDS YP_002142807.1 197363170 2196881..2197687 1 NC_011147.1 similar to Salmonella typhi CT18 ribonuclease I precursor; ribonuclease I 2197687 554290002105 SSPA1968 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease I YP_002142807.1 2196881 D 554290 CDS YP_002142808.1 197363171 2197922..2198332 1 NC_011147.1 'Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation'; nucleoside diphosphate kinase regulator 2198332 554290002106 SSPA1969 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside diphosphate kinase regulator YP_002142808.1 2197922 D 554290 CDS YP_002142809.1 197363172 2199875..2200303 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2200303 554290002108 SSPA1970 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142809.1 2199875 D 554290 CDS YP_002142810.1 197363173 complement(2200371..2201138) 1 NC_011147.1 similar to Salmonella typhi CT18 molybdopterin-containing oxidoreductase membrane anchor subunit; molybdopterin-containing oxidoreductase membrane anchor subunit 2201138 554290002109 SSPA1971 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin-containing oxidoreductase membrane anchor subunit YP_002142810.1 2200371 R 554290 CDS YP_002142811.1 197363174 complement(2201138..2201695) 1 NC_011147.1 similar to Salmonella typhi CT18 molybdopterin-containing oxidoreductase iron-sulfur subunit; molybdopterin-containing oxidoreductase iron-sulfur subunit 2201695 554290002110 SSPA1972 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin-containing oxidoreductase iron-sulfur subunit YP_002142811.1 2201138 R 554290 CDS YP_002142812.1 197363175 complement(2201692..2203920) 1 NC_011147.1 similar to Salmonella typhi CT18 molybdopterin-containing oxidoreductase catalytic subunit; molybdopterin-containing oxidoreductase catalytic subunit 2203920 554290002111 SSPA1973 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin-containing oxidoreductase catalytic subunit YP_002142812.1 2201692 R 554290 CDS YP_002142813.1 197363176 complement(2203964..2204524) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2204524 554290002112 SSPA1974 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142813.1 2203964 R 554290 CDS YP_002142814.1 197363177 complement(2204857..2206422) 1 NC_011147.1 similar to Salmonella typhi CT18 alkyl hydroperoxide reductase F52A protein (subunit F); alkyl hydroperoxide reductase subunit F 2206422 554290002113 SSPA1975 Salmonella enterica subsp. enterica serovar Paratyphi A str. alkyl hydroperoxide reductase subunit F YP_002142814.1 2204857 R 554290 CDS YP_002142815.1 197363178 complement(2206664..2207227) 1 NC_011147.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C 2207227 554290002114 SSPA1976 Salmonella enterica subsp. enterica serovar Paratyphi A str. alkyl hydroperoxide reductase subunit C YP_002142815.1 2206664 R 554290 CDS YP_002142816.1 197363179 2207668..2208414 1 NC_011147.1 Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase 2208414 dsbG 554290002115 dsbG Salmonella enterica subsp. enterica serovar Paratyphi A str. disulfide isomerase/thiol-disulfide oxidase YP_002142816.1 2207668 D 554290 CDS YP_002142817.1 197363180 2208731..2209633 1 NC_011147.1 similar to Salmonella typhi CT18 lysR-family transcriptional regulator; lysR-family transcriptional regulator 2209633 554290002116 SSPA1978 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysR-family transcriptional regulator YP_002142817.1 2208731 D 554290 CDS YP_002142818.1 197363181 2209799..2211034 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2211034 554290002117 SSPA1979 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142818.1 2209799 D 554290 CDS YP_002142819.1 197363182 2211007..2211624 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2211624 554290002118 SSPA1980 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142819.1 2211007 D 554290 CDS YP_002142820.1 197363183 complement(2211625..2212785) 1 NC_011147.1 catalyzes the transfer of an amino moiety; aminotransferase 2212785 554290002119 SSPA1981 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminotransferase YP_002142820.1 2211625 R 554290 CDS YP_002142821.1 197363184 2212912..2214000 1 NC_011147.1 member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2214000 554290002120 SSPA1982 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142821.1 2212912 D 554290 CDS YP_002142822.1 197363185 complement(2214036..2214233) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2214233 554290002121 SSPA1983 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142822.1 2214036 R 554290 CDS YP_002142823.1 197363186 complement(2214297..2216402) 1 NC_011147.1 similar to Salmonella typhi CT18 carbon starvation protein A; carbon starvation protein A 2216402 554290002122 SSPA1984 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbon starvation protein A YP_002142823.1 2214297 R 554290 CDS YP_002142824.1 197363187 complement(2216584..2216997) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2216997 554290002123 SSPA1985 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142824.1 2216584 R 554290 CDS YP_002142825.1 197363188 complement(2217000..2217755) 1 NC_011147.1 'catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin'; 2,3-dihydroxybenzoate-2,3-dehydrogenase 2217755 554290002124 SSPA1986 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_002142825.1 2217000 R 554290 CDS YP_002142826.1 197363189 complement(2217755..2218612) 1 NC_011147.1 similar to Salmonella typhi CT18 isochorismatase; isochorismatase 2218612 554290002125 SSPA1987 Salmonella enterica subsp. enterica serovar Paratyphi A str. isochorismatase YP_002142826.1 2217755 R 554290 CDS YP_002142827.1 197363190 complement(2218626..2220239) 1 NC_011147.1 'bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate'; enterobactin synthase subunit E 2220239 entE 554290002126 entE Salmonella enterica subsp. enterica serovar Paratyphi A str. enterobactin synthase subunit E YP_002142827.1 2218626 R 554290 CDS YP_002142828.1 197363191 complement(2220246..2221415) 1 NC_011147.1 similar to Salmonella typhi CT18 isochorismate synthase EntC; isochorismate synthase EntC 2221415 554290002127 SSPA1989 Salmonella enterica subsp. enterica serovar Paratyphi A str. isochorismate synthase EntC YP_002142828.1 2220246 R 554290 CDS YP_002142829.1 197363192 2221730..2222686 1 NC_011147.1 with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 2222686 554290002128 SSPA1990 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-enterobactin transporter periplasmic binding protein YP_002142829.1 2221730 D 554290 CDS YP_002142830.1 197363193 complement(2222749..2223993) 1 NC_011147.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS 2223993 554290002129 SSPA1991 Salmonella enterica subsp. enterica serovar Paratyphi A str. enterobactin exporter EntS YP_002142830.1 2222749 R 554290 CDS YP_002142831.1 197363194 2224104..2225111 1 NC_011147.1 with FepBCG is involved in the transport of ferric enterobactin; iron-enterobactin transporter membrane protein 2225111 554290002130 SSPA1992 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-enterobactin transporter membrane protein YP_002142831.1 2224104 D 554290 CDS YP_002142832.1 197363195 2225111..2226100 1 NC_011147.1 with FepBCD is involved in the transport of ferric enterobactin; iron-enterobactin transporter permease 2226100 554290002131 SSPA1993 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-enterobactin transporter permease YP_002142832.1 2225111 D 554290 CDS YP_002142833.1 197363196 2226097..2226891 1 NC_011147.1 with FepBDE is involved in the transport of ferric enterobactin; iron-enterobactin transporter ATP-binding protein 2226891 554290002132 SSPA1994 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-enterobactin transporter ATP-binding protein YP_002142833.1 2226097 D 554290 CDS YP_002142834.1 197363197 complement(2226944..2228080) 1 NC_011147.1 part of the ferric enterobactin transport system; necessary for enetrobactin uptake; ferric enterobactin transport protein FepE 2228080 554290002133 SSPA1995 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferric enterobactin transport protein FepE YP_002142834.1 2226944 R 554290 CDS YP_002142835.1 197363198 complement(2228330..2232214) 1 NC_011147.1 'with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin'; enterobactin synthase subunit F 2232214 entF 554290002134 entF Salmonella enterica subsp. enterica serovar Paratyphi A str. enterobactin synthase subunit F YP_002142835.1 2228330 R 554290 CDS YP_002142836.1 197363199 complement(2232211..2232429) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2232429 554290002135 SSPA1997 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142836.1 2232211 R 554290 CDS YP_002142837.1 197363200 complement(2232460..2233674) 1 NC_011147.1 similar to Salmonella typhi CT18 enterochelin esterase; enterobactin/ferric enterobactin esterase 2233674 554290002136 SSPA1998 Salmonella enterica subsp. enterica serovar Paratyphi A str. enterobactin/ferric enterobactin esterase YP_002142837.1 2232460 R 554290 CDS YP_002142838.1 197363201 2233863..2236118 1 NC_011147.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 2236118 554290002137 SSPA1999 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane receptor FepA YP_002142838.1 2233863 D 554290 CDS YP_002142839.1 197363202 2236165..2236869 1 NC_011147.1 similar to Salmonella typhi CT18 enterobactin synthetase component D; enterobactin synthase multienzyme complex phosphopantetheinyltransferase 2236869 554290002138 SSPA2000 Salmonella enterica subsp. enterica serovar Paratyphi A str. enterobactin synthase multienzyme complex phosphopantetheinyltransferase YP_002142839.1 2236165 D 554290 CDS YP_002142840.1 197363203 2236881..2237999 1 NC_011147.1 ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 2237999 554290002139 SSPA2001 Salmonella enterica subsp. enterica serovar Paratyphi A str. carboxylate-amine ligase YP_002142840.1 2236881 D 554290 CDS YP_002142841.1 197363204 complement(2238320..2238661) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional activator RamA; transcriptional activator RamA 2238661 554290002140 SSPA2002 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator RamA YP_002142841.1 2238320 R 554290 CDS YP_002142842.1 197363205 2238950..2239531 1 NC_011147.1 similar to Salmonella typhi CT18 tetR-family transcriptional regulator; TetR family regulatory protein 2239531 554290002141 SSPA2003 Salmonella enterica subsp. enterica serovar Paratyphi A str. TetR family regulatory protein YP_002142842.1 2238950 D 554290 CDS YP_002142843.1 197363206 2239531..2239899 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2239899 554290002142 SSPA2004 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142843.1 2239531 D 554290 CDS YP_002142844.1 197363207 2239996..2240649 1 NC_011147.1 'catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive'; dihydropteridine reductase 2240649 554290002143 SSPA2005 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydropteridine reductase YP_002142844.1 2239996 D 554290 CDS YP_002142845.1 197363208 complement(2240916..2242886) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane esterase; outer membrane esterase 2242886 554290002144 SSPA2006 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane esterase YP_002142845.1 2240916 R 554290 CDS YP_002142846.1 197363209 2243197..2244444 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2244444 554290002145 SSPA2007 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142846.1 2243197 D 554290 CDS YP_002142847.1 197363210 complement(2244486..2245880) 1 NC_011147.1 similar to Salmonella typhi CT18 phenylalanine-specific permease; phenylalanine transporter 2245880 554290002146 SSPA2008 Salmonella enterica subsp. enterica serovar Paratyphi A str. phenylalanine transporter YP_002142847.1 2244486 R 554290 CDS YP_002142848.1 197363211 2246206..2247381 1 NC_011147.1 similar to Salmonella typhimurium ATPase involved in DNA repair; DNA repair ATPase 2247381 554290002147 SSPA2009 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA repair ATPase YP_002142848.1 2246206 D 554290 CDS YP_002142849.1 197363212 complement(2247460..2248020) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2248020 554290002148 SSPA2010 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142849.1 2247460 R 554290 CDS YP_002142850.1 197363213 complement(2248033..2248269) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical secreted protein; hypothetical protein 2248269 554290002149 SSPA2011 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142850.1 2248033 R 554290 CDS YP_002142851.1 197363214 complement(2248426..2249751) 1 NC_011147.1 Involved in disulfide oxidoreductase activity and electron transport; pyridine nucleotide-disulfide oxidoreductase 2249751 554290002150 SSPA2012 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyridine nucleotide-disulfide oxidoreductase YP_002142851.1 2248426 R 554290 CDS YP_002142852.2 449784957 2249967..2250821 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical araC-family transcriptional regulator; hypothetical protein 2250821 554290002151 SSPA2013 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142852.2 2249967 D 554290 CDS YP_002142853.1 197363216 2251382..2251627 1 NC_011147.1 similar to Salmonella typhi CT18 possible copper-binding protein; copper-binding protein 2251627 554290002154 SSPA2015 Salmonella enterica subsp. enterica serovar Paratyphi A str. copper-binding protein YP_002142853.1 2251382 D 554290 CDS YP_002142854.1 197363217 2252030..2252392 1 NC_011147.1 similar to Salmonella typhi Ty2 bactoprenol-linked glucose translocase; bactoprenol-linked glucose translocase 2252392 554290002155 SSPA2016 Salmonella enterica subsp. enterica serovar Paratyphi A str. bactoprenol-linked glucose translocase YP_002142854.1 2252030 D 554290 CDS YP_002142855.1 197363218 2252389..2253315 1 NC_011147.1 similar to Salmonella typhi Ty2 bactoprenol glucosyltransferase; bactoprenol glucosyltransferase 2253315 554290002156 SSPA2017 Salmonella enterica subsp. enterica serovar Paratyphi A str. bactoprenol glucosyltransferase YP_002142855.1 2252389 D 554290 CDS YP_002142856.1 197363219 2256448..2257044 1 NC_011147.1 similar to Salmonella typhi CT18 fimbriae w protein; fimbriae w protein 2257044 554290002162 SSPA2019 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbriae w protein YP_002142856.1 2256448 D 554290 CDS YP_002142857.1 197363220 2257209..2257517 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2257517 554290002163 SSPA2020 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142857.1 2257209 D 554290 CDS YP_002142858.2 449784958 2257536..2258258 1 NC_011147.1 similar to Salmonella typhi CT18 fimbriae Y protein; fimbriae Y protein 2258258 554290002164 SSPA2021 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbriae Y protein YP_002142858.2 2257536 D 554290 CDS YP_002142859.1 197363222 2258862..2259494 1 NC_011147.1 activates the production of the major fimbrae protein FimA; transcriptional regulator FimZ 2259494 554290002165 SSPA2022 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator FimZ YP_002142859.1 2258862 D 554290 CDS YP_002142860.1 197363223 complement(2259540..2260058) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbria-like protein FimF precursor; fimbrial protein 2260058 554290002166 SSPA2023 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002142860.1 2259540 R 554290 CDS YP_002142861.1 197363224 complement(2260068..2261075) 1 NC_011147.1 similar to Salmonella typhi CT18 FimH protein precursor; FimH protein 2261075 554290002167 SSPA2024 Salmonella enterica subsp. enterica serovar Paratyphi A str. FimH protein YP_002142861.1 2260068 R 554290 CDS YP_002142862.1 197363225 complement(2261090..2263702) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane usher protein FimD precursor; outer membrane usher protein FimD 2263702 554290002168 SSPA2025 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane usher protein FimD YP_002142862.1 2261090 R 554290 CDS YP_002142863.1 197363226 complement(2263733..2264425) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 2264425 554290002169 SSPA2026 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002142863.1 2263733 R 554290 CDS YP_002142864.1 197363227 complement(2264469..2265002) 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 2265002 554290002170 SSPA2027 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142864.1 2264469 R 554290 CDS YP_002142865.1 197363228 complement(2265077..2265634) 1 NC_011147.1 'similar to Salmonella typhi CT18 type-1 fimbrial protein, a chain precursor'; type-1 fimbrial protein, a chain 2265634 554290002171 SSPA2028 Salmonella enterica subsp. enterica serovar Paratyphi A str. type-1 fimbrial protein, a chain YP_002142865.1 2265077 R 554290 CDS YP_002142866.1 197363229 2266169..2267035 1 NC_011147.1 'catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate'; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2267035 554290002172 SSPA2029 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002142866.1 2266169 D 554290 CDS YP_002142867.1 197363230 2267037..2267249 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2267249 554290002173 SSPA2030 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142867.1 2267037 D 554290 CDS YP_002142868.1 197363231 2267377..2267925 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2267925 554290002174 SSPA2031 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142868.1 2267377 D 554290 CDS YP_002142869.1 197363232 complement(2268016..2269401) 1 NC_011147.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2269401 cysS 554290002175 cysS Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteinyl-tRNA synthetase YP_002142869.1 2268016 R 554290 CDS YP_002142870.1 197363233 2269574..2270068 1 NC_011147.1 similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl cis-trans isomerase B 2270068 554290002176 SSPA2033 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-prolyl cis-trans isomerase B YP_002142870.1 2269574 D 554290 CDS YP_002142871.1 197363234 2270071..2270793 1 NC_011147.1 'catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine'; UDP-2,3-diacylglucosamine hydrolase 2270793 554290002177 SSPA2034 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-2,3-diacylglucosamine hydrolase YP_002142871.1 2270071 D 554290 CDS YP_002142872.1 197363235 2270911..2271420 1 NC_011147.1 similar to Salmonella typhi CT18 phosphoribosylaminoimidazole carboxylase catalytic subunit; phosphoribosylaminoimidazole carboxylase catalytic subunit 2271420 554290002178 SSPA2035 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002142872.1 2270911 D 554290 CDS YP_002142873.1 197363236 2271417..2272484 1 NC_011147.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 2272484 554290002179 SSPA2036 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002142873.1 2271417 D 554290 CDS YP_002142874.1 197363237 complement(2272525..2273418) 1 NC_011147.1 similar to Salmonella typhi CT18 carbamate kinase; carbamate kinase 2273418 554290002180 SSPA2037 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbamate kinase YP_002142874.1 2272525 R 554290 CDS YP_002142875.1 197363238 complement(2273422..2274231) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2274231 554290002181 SSPA2038 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142875.1 2273422 R 554290 CDS YP_002142876.1 197363239 complement(2274243..2275502) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2275502 554290002182 SSPA2039 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142876.1 2274243 R 554290 CDS YP_002142877.1 197363240 2277401..2278450 1 NC_011147.1 similar to Salmonella typhi CT18 ureidoglycolate dehydrogenase; ureidoglycolate dehydrogenase 2278450 554290002184 SSPA2040 Salmonella enterica subsp. enterica serovar Paratyphi A str. ureidoglycolate dehydrogenase YP_002142877.1 2277401 D 554290 CDS YP_002142878.1 197363241 2278472..2279707 1 NC_011147.1 'allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide'; allantoate amidohydrolase 2279707 554290002185 SSPA2041 Salmonella enterica subsp. enterica serovar Paratyphi A str. allantoate amidohydrolase YP_002142878.1 2278472 D 554290 CDS YP_002142879.1 197363242 2279718..2280503 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2280503 554290002186 SSPA2042 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142879.1 2279718 D 554290 CDS YP_002142880.1 197363243 complement(2280583..2281731) 1 NC_011147.1 similar to Salmonella typhi CT18 glycerate kinase; glycerate kinase 2281731 554290002187 SSPA2043 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerate kinase YP_002142880.1 2280583 R 554290 CDS YP_002142881.1 197363244 complement(2281754..2283052) 1 NC_011147.1 similar to Salmonella typhi CT18 permease protein; purine permease YbbY 2283052 554290002188 SSPA2044 Salmonella enterica subsp. enterica serovar Paratyphi A str. purine permease YbbY YP_002142881.1 2281754 R 554290 CDS YP_002142882.1 197363245 complement(2283111..2284472) 1 NC_011147.1 Plays a crucial role on both purine and pyrimidine metabolism; allantoinase 2284472 554290002189 SSPA2045 Salmonella enterica subsp. enterica serovar Paratyphi A str. allantoinase YP_002142882.1 2283111 R 554290 CDS YP_002142883.1 197363246 complement(2286101..2287348) 1 NC_011147.1 similar to Salmonella typhi CT18 probable metabolite transport protein; metabolite transport protein 2287348 554290002191 SSPA2046 Salmonella enterica subsp. enterica serovar Paratyphi A str. metabolite transport protein YP_002142883.1 2286101 R 554290 CDS YP_002142884.1 197363247 complement(2287414..2288292) 1 NC_011147.1 2-hydroxy-3-oxopropionate reductase 2288292 554290002192 SSPA2047 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-hydroxy-3-oxopropionate reductase YP_002142884.1 2287414 R 554290 CDS YP_002142885.1 197363248 complement(2288392..2289168) 1 NC_011147.1 similar to Salmonella typhi Ty2 hydroxypyruvate isomerase; hydroxypyruvate isomerase 2289168 554290002193 SSPA2048 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroxypyruvate isomerase YP_002142885.1 2288392 R 554290 CDS YP_002142886.1 197363249 complement(2289181..2290962) 1 NC_011147.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 2290962 554290002194 SSPA2049 Salmonella enterica subsp. enterica serovar Paratyphi A str. glyoxylate carboligase YP_002142886.1 2289181 R 554290 CDS YP_002142887.1 197363250 complement(2291047..2291865) 1 NC_011147.1 regulates operons involved in the utilization of allantoin; DNA-binding transcriptional repressor AllR 2291865 554290002195 SSPA2050 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor AllR YP_002142887.1 2291047 R 554290 CDS YP_002142888.1 197363251 complement(2291944..2292426) 1 NC_011147.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase 2292426 554290002196 SSPA2051 Salmonella enterica subsp. enterica serovar Paratyphi A str. ureidoglycolate hydrolase YP_002142888.1 2291944 R 554290 CDS YP_002142889.1 197363252 2292653..2293579 1 NC_011147.1 activator of the allDC-ylbA operon involved in allantoin utilization; DNA-binding transcriptional activator AllS 2293579 554290002197 SSPA2052 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator AllS YP_002142889.1 2292653 D 554290 CDS YP_002142890.1 197363253 2293649..2294743 1 NC_011147.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2294743 554290002198 SSPA2053 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA 2-selenouridine synthase YP_002142890.1 2293649 D 554290 CDS YP_002142891.1 197363254 complement(2294782..2295441) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter integral membrane protein; ABC transporter 2295441 554290002199 SSPA2054 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter YP_002142891.1 2294782 R 554290 CDS YP_002142892.1 197363255 complement(2295434..2296450) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2296450 554290002200 SSPA2055 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142892.1 2295434 R 554290 CDS YP_002142893.1 197363256 complement(2296487..2297317) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 2297317 554290002201 SSPA2056 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002142893.1 2296487 R 554290 CDS YP_002142894.1 197363257 complement(2297574..2298707) 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 2298707 554290002202 SSPA2057 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002142894.1 2297574 R 554290 CDS YP_002142895.1 197363258 complement(2298893..2301307) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2301307 554290002203 SSPA2058 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142895.1 2298893 R 554290 CDS YP_002142896.1 197363259 complement(2301304..2301990) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2301990 554290002204 SSPA2059 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142896.1 2301304 R 554290 CDS YP_002142897.1 197363260 2301961..2302575 1 NC_011147.1 similar to Salmonella typhi CT18 acyl-coA thioesterase I; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 2302575 554290002205 SSPA2060 Salmonella enterica subsp. enterica serovar Paratyphi A str. multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 YP_002142897.1 2301961 D 554290 CDS YP_002142898.1 197363261 2302730..2303500 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical oxidoreductase; short chain dehydrogenase 2303500 554290002206 SSPA2061 Salmonella enterica subsp. enterica serovar Paratyphi A str. short chain dehydrogenase YP_002142898.1 2302730 D 554290 CDS YP_002142899.1 197363262 2303560..2304414 1 NC_011147.1 similar to Salmonella typhi CT18 thioredoxin-like protein; thioredoxin-like protein 2304414 554290002207 SSPA2062 Salmonella enterica subsp. enterica serovar Paratyphi A str. thioredoxin-like protein YP_002142899.1 2303560 D 554290 CDS YP_002142900.1 197363263 complement(2304500..2305279) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2305279 554290002208 SSPA2063 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142900.1 2304500 R 554290 CDS YP_002142901.1 197363264 complement(2305266..2305943) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 2305943 554290002209 SSPA2064 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002142901.1 2305266 R 554290 CDS YP_002142902.1 197363265 2306824..2307276 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2307276 554290002211 SSPA2065 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142902.1 2306824 D 554290 CDS YP_002142903.1 197363266 complement(2307277..2307693) 1 NC_011147.1 activator of copper-responsive regulon genes; DNA-binding transcriptional regulator CueR 2307693 554290002212 SSPA2066 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator CueR YP_002142903.1 2307277 R 554290 CDS YP_002142904.1 197363267 2307803..2310304 1 NC_011147.1 similar to Salmonella typhi Ty2 copper-transporting ATPase; copper exporting ATPase 2310304 copA 554290002213 copA Salmonella enterica subsp. enterica serovar Paratyphi A str. copper exporting ATPase YP_002142904.1 2307803 D 554290 CDS YP_002142905.1 197363268 2310458..2311237 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2311237 554290002214 SSPA2068 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142905.1 2310458 D 554290 CDS YP_002142906.1 197363269 2311371..2312165 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2312165 554290002215 SSPA2069 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142906.1 2311371 D 554290 CDS YP_002142907.1 197363270 2312367..2312846 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2312846 554290002216 SSPA2070 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142907.1 2312367 D 554290 CDS YP_002142908.1 197363271 complement(2312963..2314615) 1 NC_011147.1 'catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides'; bifunctional UDP-sugar hydrolase/5'-nucleotidase 2314615 ushA 554290002217 ushA Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional UDP-sugar hydrolase/5'-nucleotidase YP_002142908.1 2312963 R 554290 CDS YP_002142909.1 197363272 2314787..2316007 1 NC_011147.1 similar to Salmonella typhi CT18 fosmidomycin resistance protein; fosmidomycin resistance protein 2316007 554290002218 SSPA2072 Salmonella enterica subsp. enterica serovar Paratyphi A str. fosmidomycin resistance protein YP_002142909.1 2314787 D 554290 CDS YP_002142910.1 197363273 2316222..2317898 1 NC_011147.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein 2317898 554290002219 SSPA2073 Salmonella enterica subsp. enterica serovar Paratyphi A str. cation:proton antiport protein YP_002142910.1 2316222 D 554290 CDS YP_002142911.1 197363274 complement(2317947..2319251) 1 NC_011147.1 similar to Salmonella typhi CT18 inosine-guanosine kinase; inosine-guanosine kinase 2319251 554290002220 SSPA2074 Salmonella enterica subsp. enterica serovar Paratyphi A str. inosine-guanosine kinase YP_002142911.1 2317947 R 554290 CDS YP_002142912.1 197363275 2319404..2320375 1 NC_011147.1 similar to Salmonella typhi CT18 acetyl esterase; acetyl esterase 2320375 554290002221 SSPA2075 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl esterase YP_002142912.1 2319404 D 554290 CDS YP_002142913.1 197363276 complement(2320372..2321334) 1 NC_011147.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2321334 hemH 554290002222 hemH Salmonella enterica subsp. enterica serovar Paratyphi A str. ferrochelatase YP_002142913.1 2320372 R 554290 CDS YP_002142914.1 197363277 complement(2321564..2322208) 1 NC_011147.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2322208 adk 554290002223 adk Salmonella enterica subsp. enterica serovar Paratyphi A str. adenylate kinase YP_002142914.1 2321564 R 554290 CDS YP_002142915.1 197363278 complement(2322855..2324753) 1 NC_011147.1 molecular chaperone; heat shock protein 90 2324753 554290002224 SSPA2078 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat shock protein 90 YP_002142915.1 2322855 R 554290 CDS YP_002142916.1 197363279 complement(2324840..2325445) 1 NC_011147.1 'involved in a recombinational process of DNA repair, independent of the recBC complex'; recombination protein RecR 2325445 recR 554290002225 recR Salmonella enterica subsp. enterica serovar Paratyphi A str. recombination protein RecR YP_002142916.1 2324840 R 554290 CDS YP_002142917.1 197363280 complement(2325445..2325774) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2325774 554290002226 SSPA2080 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142917.1 2325445 R 554290 CDS YP_002142918.1 197363281 complement(2325820..2327748) 1 NC_011147.1 'catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA'; DNA polymerase III subunits gamma and tau 2327748 554290002227 SSPA2081 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunits gamma and tau YP_002142918.1 2325820 R 554290 CDS YP_002142919.1 197363282 complement(2327862..2328413) 1 NC_011147.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2328413 554290002228 SSPA2082 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenine phosphoribosyltransferase YP_002142919.1 2327862 R 554290 CDS YP_002142920.1 197363283 complement(2328566..2328943) 1 NC_011147.1 hypothetical protein 2328943 ybaN 554290002229 ybaN Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142920.1 2328566 R 554290 CDS YP_002142921.1 197363284 2329012..2329539 1 NC_011147.1 'PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks'; primosomal replication protein N'' 2329539 554290002230 SSPA2084 Salmonella enterica subsp. enterica serovar Paratyphi A str. primosomal replication protein N'' YP_002142921.1 2329012 D 554290 CDS YP_002142922.1 197363285 2329553..2329720 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2329720 554290002231 SSPA2085 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142922.1 2329553 D 554290 CDS YP_002142923.1 197363286 2329790..2330713 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2330713 554290002232 SSPA2086 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142923.1 2329790 D 554290 CDS YP_002142924.1 197363287 complement(2330755..2334117) 1 NC_011147.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 2334117 554290002233 SSPA2087 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium efflux protein KefA YP_002142924.1 2330755 R 554290 CDS YP_002142925.1 197363288 complement(2334236..2334889) 1 NC_011147.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 2334889 554290002234 SSPA2088 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor AcrR YP_002142925.1 2334236 R 554290 CDS YP_002142926.1 197363289 2335031..2336224 1 NC_011147.1 similar to Salmonella typhi CT18 acriflavin resistance protein A precursor; acriflavin resistance protein A 2336224 554290002235 SSPA2089 Salmonella enterica subsp. enterica serovar Paratyphi A str. acriflavin resistance protein A YP_002142926.1 2335031 D 554290 CDS YP_002142927.1 197363290 2336247..2339396 1 NC_011147.1 similar to Salmonella typhi CT18 acriflavin resistance protein B; acriflavin resistance protein B 2339396 554290002236 SSPA2090 Salmonella enterica subsp. enterica serovar Paratyphi A str. acriflavin resistance protein B YP_002142927.1 2336247 D 554290 CDS YP_002142928.1 197363291 2339892..2340266 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2340266 554290002237 SSPA2091 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142928.1 2339892 D 554290 CDS YP_002142929.1 197363292 2340294..2340512 1 NC_011147.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 2340512 554290002238 SSPA2092 Salmonella enterica subsp. enterica serovar Paratyphi A str. hemolysin expression-modulating protein YP_002142929.1 2340294 D 554290 CDS YP_002142930.1 197363293 2340691..2341242 1 NC_011147.1 similar to Salmonella typhi Ty2 maltose O-acetyltransferase; maltose O-acetyltransferase 2341242 554290002239 SSPA2093 Salmonella enterica subsp. enterica serovar Paratyphi A str. maltose O-acetyltransferase YP_002142930.1 2340691 D 554290 CDS YP_002142931.1 197363294 2341358..2341828 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2341828 554290002240 SSPA2094 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142931.1 2341358 D 554290 CDS YP_002142932.1 197363295 complement(2341884..2342024) 1 NC_011147.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 2342024 rpmJ 554290002241 rpmJ Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L36 YP_002142932.1 2341884 R 554290 CDS YP_002142933.1 197363296 complement(2342030..2342290) 1 NC_011147.1 'RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome'; 50S ribosomal protein L31 2342290 rpmE2 554290002242 rpmE2 Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L31 YP_002142933.1 2342030 R 554290 CDS YP_002142934.1 197363297 2342515..2344065 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence; hypothetical protein 2344065 554290002243 SSPA2097 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142934.1 2342515 D 554290 CDS YP_002142935.1 197363298 2344296..2344685 1 NC_011147.1 similar to Salmonella typhi CT18 methylated-DNA methyltransferase; methylated-DNA methyltransferase 2344685 554290002245 SSPA2098 Salmonella enterica subsp. enterica serovar Paratyphi A str. methylated-DNA methyltransferase YP_002142935.1 2344296 D 554290 CDS YP_002142936.1 197363299 complement(2344718..2345287) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical lipoprotein; hypothetical protein 2345287 554290002246 SSPA2099 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142936.1 2344718 R 554290 CDS YP_002142937.1 197363300 2345502..2346362 1 NC_011147.1 similar to Salmonella typhi CT18 acyl-CoA thioesterase II; Pseudogene in Paratyphi A straina ATCC9150 (SPA2258) due to N-terminal truncation; acyl-CoA thioesterase II 2346362 554290002247 SSPA2100 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl-CoA thioesterase II YP_002142937.1 2345502 D 554290 CDS YP_002142938.1 197363301 complement(2346462..2347748) 1 NC_011147.1 similar to Salmonella typhi CT18 probable ammonium transporter; ammonium transporter 2347748 554290002248 SSPA2101 Salmonella enterica subsp. enterica serovar Paratyphi A str. ammonium transporter YP_002142938.1 2346462 R 554290 CDS YP_002142939.1 197363302 complement(2347780..2348118) 1 NC_011147.1 'indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.'; nitrogen regulatory protein P-II 2 2348118 554290002249 SSPA2102 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrogen regulatory protein P-II 2 YP_002142939.1 2347780 R 554290 CDS YP_002142940.1 197363303 complement(2348331..2350073) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding membrane protein; multidrug transporter membrane ATP-binding protein 2350073 554290002250 SSPA2103 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug transporter membrane ATP-binding protein YP_002142940.1 2348331 R 554290 CDS YP_002142941.1 197363304 complement(2350105..2351877) 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding membrane protein; multidrug transporter membrane ATP-binding protein 2351877 554290002251 SSPA2104 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug transporter membrane ATP-binding protein YP_002142941.1 2350105 R 554290 CDS YP_002142942.1 197363305 complement(2351918..2352376) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical transcriptional regulator; hypothetical protein 2352376 554290002252 SSPA2105 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142942.1 2351918 R 554290 CDS YP_002142943.1 197363306 2352489..2353544 1 NC_011147.1 similar to Salmonella typhi CT18 lyase; lyase 2353544 554290002253 SSPA2106 Salmonella enterica subsp. enterica serovar Paratyphi A str. lyase YP_002142943.1 2352489 D 554290 CDS YP_002142944.1 197363307 complement(2353594..2354412) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2354412 554290002254 SSPA2107 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142944.1 2353594 R 554290 CDS YP_002142945.2 449784959 2354513..2356213 1 NC_011147.1 similar to Salmonella typhi CT18 solute-binding protein; solute-binding protein 2356213 554290002255 SSPA2108 Salmonella enterica subsp. enterica serovar Paratyphi A str. solute-binding protein YP_002142945.2 2354513 D 554290 CDS YP_002142946.1 197363309 2356278..2356973 1 NC_011147.1 'YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His'; queuosine biosynthesis protein QueC 2356973 554290002256 SSPA2109 Salmonella enterica subsp. enterica serovar Paratyphi A str. queuosine biosynthesis protein QueC YP_002142946.1 2356278 D 554290 CDS YP_002142947.1 197363310 complement(2357079..2357477) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2357477 554290002257 SSPA2110 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142947.1 2357079 R 554290 CDS YP_002142948.1 197363311 complement(2357581..2357955) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2357955 554290002258 SSPA2111 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142948.1 2357581 R 554290 CDS YP_002142949.1 197363312 complement(2358105..2359976) 1 NC_011147.1 similar to Salmonella typhi Ty2 peptidyl-prolyl cis-trans isomerase D; peptidyl-prolyl cis-trans isomerase D 2359976 554290002259 SSPA2112 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-prolyl cis-trans isomerase D YP_002142949.1 2358105 R 554290 CDS YP_002142950.1 197363313 complement(2360267..2360539) 1 NC_011147.1 histone-like DNA-binding protein; transcriptional regulator HU subunit beta 2360539 554290002260 SSPA2113 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator HU subunit beta YP_002142950.1 2360267 R 554290 CDS YP_002142951.1 197363314 complement(2360748..2363102) 1 NC_011147.1 similar to Salmonella typhi CT18 Lon protease; DNA-binding ATP-dependent protease La 2363102 554290002261 SSPA2114 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding ATP-dependent protease La YP_002142951.1 2360748 R 554290 CDS YP_002142952.1 197363315 complement(2363288..2364559) 1 NC_011147.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2364559 clpX 554290002262 clpX Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent protease ATP-binding subunit ClpX YP_002142952.1 2363288 R 554290 CDS YP_002142953.1 197363316 complement(2364811..2365434) 1 NC_011147.1 'hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates'; ATP-dependent Clp protease proteolytic subunit 2365434 clpP 554290002263 clpP Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent Clp protease proteolytic subunit YP_002142953.1 2364811 R 554290 CDS YP_002142954.1 197363317 complement(2365681..2366979) 1 NC_011147.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2366979 tig 554290002264 tig Salmonella enterica subsp. enterica serovar Paratyphi A str. trigger factor YP_002142954.1 2365681 R 554290 CDS YP_002142955.1 197363318 complement(2367326..2367643) 1 NC_011147.1 'positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress'; transcriptional regulator BolA 2367643 554290002265 SSPA2118 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator BolA YP_002142955.1 2367326 R 554290 CDS YP_002142956.1 197363319 2367947..2368525 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 2368525 554290002266 SSPA2119 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142956.1 2367947 D 554290 CDS YP_002142957.1 197363320 2368569..2370044 1 NC_011147.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 2370044 ampG 554290002267 ampG Salmonella enterica subsp. enterica serovar Paratyphi A str. muropeptide transporter YP_002142957.1 2368569 D 554290 CDS YP_002142958.1 197363321 2370497..2371453 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II 2371453 554290002268 SSPA2121 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome o ubiquinol oxidase subunit II YP_002142958.1 2370497 D 554290 CDS YP_002142959.1 197363322 2371464..2373455 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 2373455 554290002269 SSPA2122 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome o ubiquinol oxidase subunit I YP_002142959.1 2371464 D 554290 CDS YP_002142960.2 449784960 2373445..2374059 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 2374059 554290002270 SSPA2123 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome o ubiquinol oxidase subunit III YP_002142960.2 2373445 D 554290 CDS YP_002142961.1 197363324 2374059..2374388 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase C subunit; cytochrome o ubiquinol oxidase subunit IV 2374388 554290002271 SSPA2124 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome o ubiquinol oxidase subunit IV YP_002142961.1 2374059 D 554290 CDS YP_002142962.1 197363325 2374400..2375290 1 NC_011147.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 2375290 554290002272 SSPA2125 Salmonella enterica subsp. enterica serovar Paratyphi A str. protoheme IX farnesyltransferase YP_002142962.1 2374400 D 554290 CDS YP_002142963.2 449784961 complement(2375338..2376807) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2376807 554290002273 SSPA2126 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142963.2 2375338 R 554290 CDS YP_002142964.1 197363327 complement(2376819..2378330) 1 NC_011147.1 similar to Salmonella typhimurium periplasmic protein; hypothetical protein 2378330 554290002274 SSPA2127 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142964.1 2376819 R 554290 CDS YP_002142965.1 197363328 2378505..2378639 1 NC_011147.1 similar to Salmonella typhimurium transposase; transposase 2378639 554290002275 SSPA2128 Salmonella enterica subsp. enterica serovar Paratyphi A str. transposase YP_002142965.1 2378505 D 554290 CDS YP_002142966.1 197363329 2378867..2380231 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical major facilitator family transport protein; hypothetical protein 2380231 554290002276 SSPA2129 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142966.1 2378867 D 554290 CDS YP_002142967.1 197363330 complement(2380278..2380787) 1 NC_011147.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 2380787 554290002277 SSPA2130 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleotide-binding protein YP_002142967.1 2380278 R 554290 CDS YP_002142968.1 197363331 2380895..2381806 1 NC_011147.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2381806 554290002278 SSPA2131 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-dehydropantoate 2-reductase YP_002142968.1 2380895 D 554290 CDS YP_002142969.1 197363332 2381769..2382359 1 NC_011147.1 similar to Salmonella typhi CT18 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein; DJ-1 family protein 2382359 554290002279 SSPA2132 Salmonella enterica subsp. enterica serovar Paratyphi A str. DJ-1 family protein YP_002142969.1 2381769 D 554290 CDS YP_002142970.1 197363333 complement(2382456..2383265) 1 NC_011147.1 catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase 2383265 554290002280 SSPA2133 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphonoacetaldehyde hydrolase YP_002142970.1 2382456 R 554290 CDS YP_002142971.1 197363334 complement(2383275..2384378) 1 NC_011147.1 catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase 2384378 554290002281 SSPA2134 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-aminoethylphosphonate--pyruvate transaminase YP_002142971.1 2383275 R 554290 CDS YP_002142972.1 197363335 2384518..2385237 1 NC_011147.1 similar to Salmonella typhi CT18 probable regulator of 2-aminoethylphosphonate uptake and metabolism operon; regulator of 2-aminoethylphosphonate uptake and metabolism operon 2385237 554290002282 SSPA2135 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulator of 2-aminoethylphosphonate uptake and metabolism operon YP_002142972.1 2384518 D 554290 CDS YP_002142973.2 449784962 2385435..2386448 1 NC_011147.1 similar to Salmonella typhi CT18 probable periplasmic binding component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter substrate-binding protein 2386448 554290002283 SSPA2136 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-aminoethylphosphonate transporter substrate-binding protein YP_002142973.2 2385435 D 554290 CDS YP_002142974.1 197363337 2386454..2387563 1 NC_011147.1 similar to Salmonella typhi CT18 probable ATP-binding component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter ATP-binding protein 2387563 554290002284 SSPA2137 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-aminoethylphosphonate transporter ATP-binding protein YP_002142974.1 2386454 D 554290 CDS YP_002142975.1 197363338 2387566..2388435 1 NC_011147.1 similar to Salmonella typhi CT18 probable membrane component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter membrane protein 2388435 554290002285 SSPA2138 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-aminoethylphosphonate transporter membrane protein YP_002142975.1 2387566 D 554290 CDS YP_002142976.1 197363339 2388429..2389226 1 NC_011147.1 similar to Salmonella typhi CT18 probable membrane component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter membrane protein 2389226 554290002286 SSPA2139 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-aminoethylphosphonate transporter membrane protein YP_002142976.1 2388429 D 554290 CDS YP_002142977.1 197363340 complement(2389270..2390718) 1 NC_011147.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 2390718 554290002287 SSPA2140 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine biosynthesis protein ThiI YP_002142977.1 2389270 R 554290 CDS YP_002142978.1 197363341 2390928..2391170 1 NC_011147.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2391170 554290002288 SSPA2141 Salmonella enterica subsp. enterica serovar Paratyphi A str. exodeoxyribonuclease VII small subunit YP_002142978.1 2390928 D 554290 CDS YP_002142979.1 197363342 2391171..2392070 1 NC_011147.1 similar to Salmonella typhi CT18 geranyltranstransferase; geranyltranstransferase 2392070 554290002289 SSPA2142 Salmonella enterica subsp. enterica serovar Paratyphi A str. geranyltranstransferase YP_002142979.1 2391171 D 554290 CDS YP_002142980.1 197363343 2392094..2393956 1 NC_011147.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2393956 554290002290 SSPA2143 Salmonella enterica subsp. enterica serovar Paratyphi A str. 1-deoxy-D-xylulose-5-phosphate synthase YP_002142980.1 2392094 D 554290 CDS YP_002142981.1 197363344 2394013..2394987 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 2394987 554290002291 SSPA2144 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002142981.1 2394013 D 554290 CDS YP_002142982.1 197363345 complement(2395091..2395606) 1 NC_011147.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 2395606 554290002292 SSPA2145 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatidylglycerophosphatase A YP_002142982.1 2395091 R 554290 CDS YP_002142983.1 197363346 complement(2395584..2396561) 1 NC_011147.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 2396561 554290002293 SSPA2146 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine monophosphate kinase YP_002142983.1 2395584 R 554290 CDS YP_002142984.1 197363347 complement(2396640..2397059) 1 NC_011147.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2397059 nusB 554290002294 nusB Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription antitermination protein NusB YP_002142984.1 2396640 R 554290 CDS YP_002142985.1 197363348 complement(2397080..2397550) 1 NC_011147.1 'RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not'; 6,7-dimethyl-8-ribityllumazine synthase 2397550 ribH 554290002295 ribH Salmonella enterica subsp. enterica serovar Paratyphi A str. 6,7-dimethyl-8-ribityllumazine synthase YP_002142985.1 2397080 R 554290 CDS YP_002142986.1 197363349 complement(2397639..2398742) 1 NC_011147.1 'riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil'; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 2398742 ribD 554290002296 ribD Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YP_002142986.1 2397639 R 554290 CDS YP_002142987.1 197363350 complement(2398746..2399195) 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; transcriptional regulator NrdR 2399195 nrdR 554290002297 nrdR Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator NrdR YP_002142987.1 2398746 R 554290 CDS YP_002142988.1 197363351 2399347..2399886 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 2399886 554290002298 SSPA2151 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142988.1 2399347 D 554290 CDS YP_002142989.1 197363352 2400186..2401049 1 NC_011147.1 similar to Salmonella typhi CT18 nucleoside-specific channel-forming protein tsx precursor; nucleoside-specific channel-forming protein tsx 2401049 554290002299 SSPA2152 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside-specific channel-forming protein tsx YP_002142989.1 2400186 D 554290 CDS YP_002142990.1 197363353 2401104..2401430 1 NC_011147.1 hypothetical protein 2401430 554290002300 SSPA2153 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142990.1 2401104 D 554290 CDS YP_002142991.1 197363354 complement(2401433..2401660) 1 NC_011147.1 hypothetical protein 2401660 yajD 554290002301 yajD Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142991.1 2401433 R 554290 CDS YP_002142992.1 197363355 complement(2401678..2402025) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2402025 554290002302 SSPA2155 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142992.1 2401678 R 554290 CDS YP_002142993.1 197363356 complement(2402195..2402887) 1 NC_011147.1 similar to Salmonella typhi CT18 deoR-family transcriptional regulator; deoR-family transcriptional regulator 2402887 554290002303 SSPA2156 Salmonella enterica subsp. enterica serovar Paratyphi A str. deoR-family transcriptional regulator YP_002142993.1 2402195 R 554290 CDS YP_002142994.1 197363357 complement(2402913..2403278) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2403278 554290002304 SSPA2157 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002142994.1 2402913 R 554290 CDS YP_002142995.1 197363358 complement(2403423..2404337) 1 NC_011147.1 'forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF'; preprotein translocase subunit SecF 2404337 secF 554290002305 secF Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecF YP_002142995.1 2403423 R 554290 CDS YP_002142996.2 449784963 complement(2404405..2406252) 1 NC_011147.1 'part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane'; preprotein translocase subunit SecD 2406252 secD 554290002306 secD Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecD YP_002142996.2 2404405 R 554290 CDS YP_002142997.1 197363360 complement(2406280..2406612) 1 NC_011147.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 2406612 yajC 554290002307 yajC Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit YajC YP_002142997.1 2406280 R 554290 CDS YP_002142998.1 197363361 complement(2406635..2407762) 1 NC_011147.1 'Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)'; queuine tRNA-ribosyltransferase 2407762 tgt 554290002308 tgt Salmonella enterica subsp. enterica serovar Paratyphi A str. queuine tRNA-ribosyltransferase YP_002142998.1 2406635 R 554290 CDS YP_002142999.1 197363362 complement(2407959..2409023) 1 NC_011147.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2409023 queA 554290002309 queA Salmonella enterica subsp. enterica serovar Paratyphi A str. S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_002142999.1 2407959 R 554290 CDS YP_002143000.1 197363363 2409117..2409698 1 NC_011147.1 Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; acyl carrier protein phosphodiesterase 2409698 554290002310 SSPA2163 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl carrier protein phosphodiesterase YP_002143000.1 2409117 D 554290 CDS YP_002143001.1 197363364 2409908..2410510 1 NC_011147.1 similar to Salmonella typhi CT18 probable peroxidase; peroxidase 2410510 554290002311 SSPA2164 Salmonella enterica subsp. enterica serovar Paratyphi A str. peroxidase YP_002143001.1 2409908 D 554290 CDS YP_002143002.1 197363365 complement(2410582..2412399) 1 NC_011147.1 similar to Salmonella typhi CT18 maltodextrin glucosidase; maltodextrin glucosidase 2412399 554290002312 SSPA2165 Salmonella enterica subsp. enterica serovar Paratyphi A str. maltodextrin glucosidase YP_002143002.1 2410582 R 554290 CDS YP_002143003.1 197363366 complement(2412561..2413931) 1 NC_011147.1 'cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation'; proline-specific permease 2413931 proY 554290002313 proY Salmonella enterica subsp. enterica serovar Paratyphi A str. proline-specific permease YP_002143003.1 2412561 R 554290 CDS YP_002143004.1 197363367 complement(2414006..2415325) 1 NC_011147.1 similar to Salmonella typhi CT18 branched chain amino acid transport system II carrier protein; branched chain amino acid transport system II carrier protein 2415325 554290002314 SSPA2167 Salmonella enterica subsp. enterica serovar Paratyphi A str. branched chain amino acid transport system II carrier protein YP_002143004.1 2414006 R 554290 CDS YP_002143005.1 197363368 complement(2415734..2417029) 1 NC_011147.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 2417029 phoR 554290002315 phoR Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate regulon sensor protein YP_002143005.1 2415734 R 554290 CDS YP_002143006.1 197363369 complement(2417099..2417740) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein PhoB 2417740 554290002316 SSPA2169 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate regulon transcriptional regulatory protein PhoB YP_002143006.1 2417099 R 554290 CDS YP_002143007.1 197363370 2418002..2419204 1 NC_011147.1 'with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity'; exonuclease subunit SbcD 2419204 554290002317 SSPA2170 Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease subunit SbcD YP_002143007.1 2418002 D 554290 CDS YP_002143008.1 197363371 2419201..2422341 1 NC_011147.1 with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity; exonuclease subunit SbcC 2422341 554290002318 SSPA2171 Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease subunit SbcC YP_002143008.1 2419201 D 554290 CDS YP_002143009.1 197363372 2422514..2423686 1 NC_011147.1 member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; MFS transport protein AraJ 2423686 554290002319 SSPA2172 Salmonella enterica subsp. enterica serovar Paratyphi A str. MFS transport protein AraJ YP_002143009.1 2422514 D 554290 CDS YP_002143010.1 197363373 complement(2423706..2424614) 1 NC_011147.1 catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 2424614 554290002320 SSPA2173 Salmonella enterica subsp. enterica serovar Paratyphi A str. fructokinase YP_002143010.1 2423706 R 554290 CDS YP_002143011.2 449784964 2424740..2425651 1 NC_011147.1 similar to Salmonella typhi CT18 recombination associated protein RdgC; recombination associated protein RdgC 2425651 554290002321 SSPA2174 Salmonella enterica subsp. enterica serovar Paratyphi A str. recombination associated protein RdgC YP_002143011.2 2424740 D 554290 CDS YP_002143012.1 197363375 complement(2425694..2425978) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2425978 554290002322 SSPA2175 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143012.1 2425694 R 554290 CDS YP_002143013.1 197363376 complement(2426049..2426726) 1 NC_011147.1 'similar to Salmonella typhimurium protein of aro operon, regulated by aroR'; hypothetical protein 2426726 554290002323 SSPA2176 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143013.1 2426049 R 554290 CDS YP_002143014.1 197363377 complement(2426977..2427168) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2427168 554290002324 SSPA2177 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143014.1 2426977 R 554290 CDS YP_002143015.1 197363378 complement(2427195..2427740) 1 NC_011147.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 2427740 aroL 554290002325 aroL Salmonella enterica subsp. enterica serovar Paratyphi A str. shikimate kinase YP_002143015.1 2427195 R 554290 CDS YP_002143016.1 197363379 complement(2427925..2428380) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2428380 554290002326 SSPA2179 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143016.1 2427925 R 554290 CDS YP_002143017.1 197363380 2428520..2429329 1 NC_011147.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 2429329 554290002327 SSPA2180 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyrroline-5-carboxylate reductase YP_002143017.1 2428520 D 554290 CDS YP_002143018.1 197363381 complement(2429344..2430456) 1 NC_011147.1 'catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis'; diguanylate cyclase AdrA 2430456 adrA 554290002328 adrA Salmonella enterica subsp. enterica serovar Paratyphi A str. diguanylate cyclase AdrA YP_002143018.1 2429344 R 554290 CDS YP_002143019.1 197363382 complement(2430548..2430868) 1 NC_011147.1 similar to Salmonella typhi CT18 phosphate starvation-inducible protein PsiF; hypothetical protein 2430868 554290002329 SSPA2182 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143019.1 2430548 R 554290 CDS YP_002143020.1 197363383 complement(2431217..2431477) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2431477 554290002330 SSPA2183 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143020.1 2431217 R 554290 CDS YP_002143021.1 197363384 complement(2431774..2432985) 1 NC_011147.1 similar to Salmonella typhi CT18 possible efflux pump; efflux pump protein 2432985 554290002331 SSPA2184 Salmonella enterica subsp. enterica serovar Paratyphi A str. efflux pump protein YP_002143021.1 2431774 R 554290 CDS YP_002143022.1 197363385 complement(2433154..2433867) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2433867 554290002332 SSPA2185 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143022.1 2433154 R 554290 CDS YP_002143023.1 197363386 complement(2435059..2435274) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2435274 554290002334 SSPA2186 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143023.1 2435059 R 554290 CDS YP_002143024.1 197363387 2435542..2435850 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2435850 554290002335 SSPA2187 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143024.1 2435542 D 554290 CDS YP_002143025.1 197363388 complement(2435888..2436982) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 2436982 554290002336 SSPA2188 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143025.1 2435888 R 554290 CDS YP_002143026.2 449784965 complement(2436997..2438217) 1 NC_011147.1 'in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope'; transporter 2438217 554290002337 SSPA2189 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002143026.2 2436997 R 554290 CDS YP_002143027.1 197363390 2438564..2439721 1 NC_011147.1 this protein has no known enzymatic function; beta-lactam binding protein AmpH 2439721 554290002338 SSPA2190 Salmonella enterica subsp. enterica serovar Paratyphi A str. beta-lactam binding protein AmpH YP_002143027.1 2438564 D 554290 CDS YP_002143028.1 197363391 complement(2439766..2440389) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; DNA-binding transcriptional regulator 2440389 554290002339 SSPA2191 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002143028.1 2439766 R 554290 CDS YP_002143029.1 197363392 complement(2440475..2443420) 1 NC_011147.1 similar to Escherichia coli K12 flagellin structural protein; flagellin structural protein 2443420 554290002340 SSPA2192 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellin structural protein YP_002143029.1 2440475 R 554290 CDS YP_002143030.1 197363393 2443933..2444907 1 NC_011147.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2444907 554290002341 SSPA2193 Salmonella enterica subsp. enterica serovar Paratyphi A str. delta-aminolevulinic acid dehydratase YP_002143030.1 2443933 D 554290 CDS YP_002143031.1 197363394 complement(2445011..2446897) 1 NC_011147.1 'catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent'; propionyl-CoA synthetase 2446897 prpE 554290002342 prpE Salmonella enterica subsp. enterica serovar Paratyphi A str. propionyl-CoA synthetase YP_002143031.1 2445011 R 554290 CDS YP_002143032.1 197363395 complement(2446938..2448389) 1 NC_011147.1 'functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C'; 2-methylcitrate dehydratase 2448389 prpD 554290002343 prpD Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-methylcitrate dehydratase YP_002143032.1 2446938 R 554290 CDS YP_002143033.1 197363396 complement(2448429..2449598) 1 NC_011147.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 2449598 554290002344 SSPA2196 Salmonella enterica subsp. enterica serovar Paratyphi A str. methylcitrate synthase YP_002143033.1 2448429 R 554290 CDS YP_002143034.1 197363397 complement(2449721..2450608) 1 NC_011147.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2450608 prpB 554290002345 prpB Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-methylisocitrate lyase YP_002143034.1 2449721 R 554290 CDS YP_002143035.1 197363398 2450874..2452499 1 NC_011147.1 similar to Salmonella typhi CT18 propionate catabolism operon regulatory protein; propionate catabolism operon regulatory protein 2452499 554290002346 SSPA2198 Salmonella enterica subsp. enterica serovar Paratyphi A str. propionate catabolism operon regulatory protein YP_002143035.1 2450874 D 554290 CDS YP_002143036.1 197363399 complement(2452635..2452910) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2452910 554290002347 SSPA2199 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143036.1 2452635 R 554290 CDS YP_002143037.1 197363400 2453142..2453774 1 NC_011147.1 similar to Salmonella typhi CT18 RhtC-like transporter; RhtC-like transporter 2453774 554290002348 SSPA2200 Salmonella enterica subsp. enterica serovar Paratyphi A str. RhtC-like transporter YP_002143037.1 2453142 D 554290 CDS YP_002143038.1 197363401 complement(2453815..2455905) 1 NC_011147.1 similar to Salmonella typhi CT18 ferrioxamine B receptor precursor; ferrioxamine B receptor 2455905 554290002349 SSPA2201 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferrioxamine B receptor YP_002143038.1 2453815 R 554290 CDS YP_002143039.1 197363402 complement(2456069..2457073) 1 NC_011147.1 similar to Salmonella typhi CT18 AraC-family transcriptional regulator; araC family transcriptional regulator 2457073 554290002350 SSPA2202 Salmonella enterica subsp. enterica serovar Paratyphi A str. araC family transcriptional regulator YP_002143039.1 2456069 R 554290 CDS YP_002143040.1 197363403 complement(2457412..2458422) 1 NC_011147.1 similar to Salmonella typhi CT18 probable terminal oxidase subunit II; terminal oxidase subunit II 2458422 554290002352 SSPA2203 Salmonella enterica subsp. enterica serovar Paratyphi A str. terminal oxidase subunit II YP_002143040.1 2457412 R 554290 CDS YP_002143041.1 197363404 complement(2458419..2459822) 1 NC_011147.1 similar to Salmonella typhi CT18 probable terminal oxidase subunit I; terminal oxidase subunit I 2459822 554290002353 SSPA2204 Salmonella enterica subsp. enterica serovar Paratyphi A str. terminal oxidase subunit I YP_002143041.1 2458419 R 554290 CDS YP_002143042.1 197363405 complement(2459939..2460040) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2460040 554290002354 SSPA2205 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143042.1 2459939 R 554290 CDS YP_002143043.1 197363406 complement(2460317..2463286) 1 NC_011147.1 similar to Salmonella typhimurium DNA restriction (DNA helicase; DNA restriction helicase 2463286 554290002355 SSPA2206 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA restriction helicase YP_002143043.1 2460317 R 554290 CDS YP_002143044.1 197363407 complement(2463299..2465257) 1 NC_011147.1 similar to Salmonella typhi CT18 type III restriction-modification system StyLTI enzyme mod; type III restriction-modification system StyLTI enzyme mod 2465257 554290002356 SSPA2207 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III restriction-modification system StyLTI enzyme mod YP_002143044.1 2463299 R 554290 CDS YP_002143045.1 197363408 complement(2465446..2466699) 1 NC_011147.1 similar to Salmonella typhi CT18 metabolite transport protein; metabolite transport protein 2466699 554290002357 SSPA2208 Salmonella enterica subsp. enterica serovar Paratyphi A str. metabolite transport protein YP_002143045.1 2465446 R 554290 CDS YP_002143046.1 197363409 2466893..2467360 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2467360 554290002358 SSPA2209 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143046.1 2466893 D 554290 CDS YP_002143047.1 197363410 complement(2467942..2468301) 1 NC_011147.1 similar to Salmonella typhi CT18 probable lipoprotein; lipoprotein 2468301 554290002360 SSPA2210 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143047.1 2467942 R 554290 CDS YP_002143048.1 197363411 complement(2468359..2468583) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2468583 554290002361 SSPA2211 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143048.1 2468359 R 554290 CDS YP_002143049.2 449784966 complement(2468594..2469235) 1 NC_011147.1 similar to Salmonella typhi CT18 possible transcriptionl regulator; transcriptional regulator 2469235 554290002362 SSPA2212 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002143049.2 2468594 R 554290 CDS YP_002143050.1 197363413 complement(2469379..2469903) 1 NC_011147.1 similar to Salmonella typhi CT18 possible outer membrane protein; outer membrane protein 2469903 554290002363 SSPA2213 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002143050.1 2469379 R 554290 CDS YP_002143051.1 197363414 complement(2470304..2470792) 1 NC_011147.1 hypothetical protein 2470792 554290002364 SSPA2213a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143051.1 2470304 R 554290 CDS YP_002143052.1 197363415 complement(2470825..2471508) 1 NC_011147.1 similar to Salmonella typhi CT18 possible transmembrane regulator; transmembrane regulator 2471508 554290002365 SSPA2214 Salmonella enterica subsp. enterica serovar Paratyphi A str. transmembrane regulator YP_002143052.1 2470825 R 554290 CDS YP_002143053.1 197363416 complement(2471608..2473158) 1 NC_011147.1 similar to Salmonella typhi CT18 rtn protein; rtn protein 2473158 554290002366 SSPA2215 Salmonella enterica subsp. enterica serovar Paratyphi A str. rtn protein YP_002143053.1 2471608 R 554290 CDS YP_002143054.1 197363417 complement(2473484..2473984) 1 NC_011147.1 hypothetical protein 2473984 554290002367 SSPA2216 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143054.1 2473484 R 554290 CDS YP_002143055.1 197363418 complement(2473957..2474691) 1 NC_011147.1 similar to Salmonella typhi CT18 possible transmembrane regulator; transmembrane regulator 2474691 554290002368 SSPA2217 Salmonella enterica subsp. enterica serovar Paratyphi A str. transmembrane regulator YP_002143055.1 2473957 R 554290 CDS YP_002143056.1 197363419 2475355..2475891 1 NC_011147.1 similar to Salmonella typhi CT18 probable fimbrial protein; fimbrial protein 2475891 554290002369 SSPA2218 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002143056.1 2475355 D 554290 CDS YP_002143057.1 197363420 2475953..2476714 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 2476714 554290002370 SSPA2219 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002143057.1 2475953 D 554290 CDS YP_002143058.1 197363421 2476698..2479259 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 2479259 554290002371 SSPA2220 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane fimbrial usher protein YP_002143058.1 2476698 D 554290 CDS YP_002143059.1 197363422 2479264..2480589 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 2480589 554290002372 SSPA2221 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002143059.1 2479264 D 554290 CDS YP_002143060.1 197363423 2480555..2481313 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 2481313 554290002373 SSPA2222 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002143060.1 2480555 D 554290 CDS YP_002143061.1 197363424 complement(2481360..2481758) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2481758 554290002374 SSPA2223 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143061.1 2481360 R 554290 CDS YP_002143062.1 197363425 2482316..2482678 1 NC_011147.1 bactoprenol-linked glucose translocase 2482678 gtrA 554290002375 gtrA Salmonella enterica subsp. enterica serovar Paratyphi A str. bactoprenol-linked glucose translocase YP_002143062.1 2482316 D 554290 CDS YP_002143063.1 197363426 2482675..2483607 1 NC_011147.1 O-antigen conversion: bactoprenyl transferase 2483607 554290002376 SSPA2225 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-antigen conversion: bactoprenyl transferase YP_002143063.1 2482675 D 554290 CDS YP_002143064.1 197363427 2483597..2485054 1 NC_011147.1 similar to |21914419|gb|AAM81384.1| GtrC [Bacteriophage P22-pbi]; O-antigen conversion: translocase 2485054 554290002377 SSPA2226 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-antigen conversion: translocase YP_002143064.1 2483597 D 554290 CDS YP_002143065.1 197363428 complement(2485113..2487116) 1 NC_011147.1 similar to |9635551|ref|NP_059644.1| endorhamnosidase [Enterobacteria phage P22]; tailspike 2487116 554290002378 SSPA2227 Salmonella enterica subsp. enterica serovar Paratyphi A str. tailspike YP_002143065.1 2485113 R 554290 CDS YP_002143066.1 197363429 2487252..2487500 1 NC_011147.1 similar to |9635548|ref|NP_059641.1| regulatory protein [Enterobacteria phage P22]; regulatory 2487500 554290002379 SSPA2228 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory YP_002143066.1 2487252 D 554290 CDS YP_002143067.1 197363430 complement(2487953..2489884) 1 NC_011147.1 similar to |41057291|ref|NP_958189.1| gene 13 protein [Enterobacteria phage Sf6]; DNA transfer protein 2489884 554290002380 SSPA2229 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA transfer protein YP_002143067.1 2487953 R 554290 CDS YP_002143068.1 197363431 complement(2489884..2491221) 1 NC_011147.1 similar to |9635545|ref|NP_059637.1| unknown protein [Enterobacteria phage P22]; DNA transfer protein 2491221 554290002381 SSPA2230 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA transfer protein YP_002143068.1 2489884 R 554290 CDS YP_002143069.1 197363432 complement(2491264..2491953) 1 NC_011147.1 similar to |41057289|ref|NP_958187.1| gene 11 protein [Enterobacteria phage Sf6]; DNA transfer protein 2491953 554290002382 SSPA2231 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA transfer protein YP_002143069.1 2491264 R 554290 CDS YP_002143070.1 197363433 complement(2491956..2492411) 1 NC_011147.1 similar to |13559874|ref|NP_112084.1| head assembly protein [Bacteriophage HK620]; hypothetical protein 2492411 554290002383 SSPA2232 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143070.1 2491956 R 554290 CDS YP_002143071.1 197363434 complement(2492411..2493049) 1 NC_011147.1 DNA stabilization protein 2493049 554290002384 SSPA2232a Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA stabilization protein YP_002143071.1 2492411 R 554290 CDS YP_002143072.1 197363435 complement(2493053..2494471) 1 NC_011147.1 DNA stabilization protein 2494471 554290002385 SSPA2232b Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA stabilization protein YP_002143072.1 2493053 R 554290 CDS YP_002143073.1 197363436 complement(2494431..2494931) 1 NC_011147.1 DNA stabilization protein 2494931 554290002386 SSPA2232c Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA stabilization protein YP_002143073.1 2494431 R 554290 CDS YP_002143074.1 197363437 complement(2494915..2495475) 1 NC_011147.1 hypothetical protein 2495475 554290002387 SSPA2232d Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143074.1 2494915 R 554290 CDS YP_002143075.1 197363438 complement(2495516..2496808) 1 NC_011147.1 coat protein 2496808 554290002388 SSPA2232e Salmonella enterica subsp. enterica serovar Paratyphi A str. coat protein YP_002143075.1 2495516 R 554290 CDS YP_002143076.1 197363439 complement(2496808..2497719) 1 NC_011147.1 scaffolding protein 2497719 554290002389 SSPA2232f Salmonella enterica subsp. enterica serovar Paratyphi A str. scaffolding protein YP_002143076.1 2496808 R 554290 CDS YP_002143077.1 197363440 complement(2497733..2499736) 1 NC_011147.1 similar to |9635536|ref|NP_059628.1| portal protein [Enterobacteria phage P22]; portal protein 2499736 554290002390 SSPA2233 Salmonella enterica subsp. enterica serovar Paratyphi A str. portal protein YP_002143077.1 2497733 R 554290 CDS YP_002143078.1 197363441 complement(2499910..2501409) 1 NC_011147.1 terminase large subunit 2501409 554290002391 SSPA2233a Salmonella enterica subsp. enterica serovar Paratyphi A str. terminase large subunit YP_002143078.1 2499910 R 554290 CDS YP_002143079.1 197363442 complement(2501387..2501875) 1 NC_011147.1 terminase small subunit 2501875 554290002392 SSPA2233b Salmonella enterica subsp. enterica serovar Paratyphi A str. terminase small subunit YP_002143079.1 2501387 R 554290 CDS YP_002143080.1 197363443 complement(2501879..2502283) 1 NC_011147.1 hypothetical protein 2502283 554290002393 SSPA2233c Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143080.1 2501879 R 554290 CDS YP_002143081.1 197363444 complement(2502852..2503373) 1 NC_011147.1 similar to |9635595|ref|NP_061507.1| Orf11 [Pseudomonas phage D3]; hypothetical protein 2503373 554290002394 SSPA2234 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143081.1 2502852 R 554290 CDS YP_002143082.1 197363445 complement(2503586..2504053) 1 NC_011147.1 hypothetical protein 2504053 554290002395 SSPA2235 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143082.1 2503586 R 554290 CDS YP_002143083.1 197363446 complement(2504053..2504490) 1 NC_011147.1 similar to |9635531|ref|NP_059622.1| lysozyme [Enterobacteria phage P22]; lysozyme 2504490 554290002396 SSPA2236 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysozyme YP_002143083.1 2504053 R 554290 CDS YP_002143084.1 197363447 complement(2504474..2504800) 1 NC_011147.1 similar to |21914476|gb|AAM81441.1| gene 13' protein [Bacteriophage P22-pbi]; holin 2504800 554290002397 SSPA2237 Salmonella enterica subsp. enterica serovar Paratyphi A str. holin YP_002143084.1 2504474 R 554290 CDS YP_002143085.1 197363448 complement(2505235..2505858) 1 NC_011147.1 similar to |9910850|sp|O80286|REGQ_BPPS3 Antitermination protein (Protein gp23); antitermination 2505858 554290002398 SSPA2238 Salmonella enterica subsp. enterica serovar Paratyphi A str. antitermination YP_002143085.1 2505235 R 554290 CDS YP_002143086.1 197363449 complement(2505855..2506043) 1 NC_011147.1 similar to |9634211|ref|NP_037750.1| Gp68 [Bacteriophage HK97]; hypothetical protein 2506043 554290002399 SSPA2239 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143086.1 2505855 R 554290 CDS YP_002143087.1 197363450 complement(2506040..2506402) 1 NC_011147.1 similar to |13559855|ref|NP_112065.1| holiday-junction resolvase [Bacteriophage HK620]; hypothetical protein 2506402 554290002400 SSPA2240 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143087.1 2506040 R 554290 CDS YP_002143088.1 197363451 complement(2506399..2506689) 1 NC_011147.1 ORF136; similar to |9634209|ref|NP_037748.1| Gp66 [Bacteriophage HK97]; hypothetical protein 2506689 554290002401 SSPA2241 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143088.1 2506399 R 554290 CDS YP_002143089.1 197363452 complement(2506887..2507063) 1 NC_011147.1 similar to |9910778|sp|O48425|NINF_BPH19 Protein ninF; hypothetical protein 2507063 554290002402 SSPA2242 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143089.1 2506887 R 554290 CDS YP_002143090.1 197363453 complement(2507056..2507397) 1 NC_011147.1 similar to |9635524|ref|NP_059615.1| ninX protein [Enterobacteria phage P22]; hypothetical protein 2507397 554290002403 SSPA2243 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143090.1 2507056 R 554290 CDS YP_002143091.1 197363454 complement(2507400..2507576) 1 NC_011147.1 similar to |9635523|ref|NP_059614.1| ninE [Enterobacteria phage P22]; hypothetical protein 2507576 554290002404 SSPA2244 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143091.1 2507400 R 554290 CDS YP_002143092.1 197363455 complement(2507543..2507716) 1 NC_011147.1 similar to |45645192|sp|Q38663|NIND_BPP22 Protein ninD; hypothetical protein 2507716 554290002405 SSPA2245 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143092.1 2507543 R 554290 CDS YP_002143093.1 197363456 complement(2507713..2508159) 1 NC_011147.1 similar to |32170966|ref|NP_859211.1| hypothetical protein Stx1p132 [Stx1 converting bacteriophage]; hypothetical protein 2508159 554290002406 SSPA2246 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143093.1 2507713 R 554290 CDS YP_002143094.1 197363457 complement(2508116..2508412) 1 NC_011147.1 ORF98; hypothetical protein 2508412 554290002407 SSPA2247 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143094.1 2508116 R 554290 CDS YP_002143095.1 197363458 complement(2509113..2509196) 1 NC_011147.1 similar to |41057322|ref|NP_958220.1| gene 45 protein [Enterobacteria phage Sf6]; hypothetical protein 2509196 554290002408 SSPA2248 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143095.1 2509113 R 554290 CDS YP_002143096.1 197363459 complement(2509196..2510632) 1 NC_011147.1 similar to |13559848|ref|NP_112058.1| replication protein P [Bacteriophage HK620]; DNA replication 2510632 554290002409 SSPA2249 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA replication YP_002143096.1 2509196 R 554290 CDS YP_002143097.1 197363460 complement(2510622..2511521) 1 NC_011147.1 similar to |41057320|ref|NP_958218.1| gene 43 protein [Enterobacteria phage Sf6]; DNA replication 2511521 554290002410 SSPA2250 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA replication YP_002143097.1 2510622 R 554290 CDS YP_002143098.1 197363461 complement(2511514..2511660) 1 NC_011147.1 similar to |9635518|ref|NP_059609.1| unknown protein [Enterobacteria phage P22]; hypothetical protein 2511660 554290002411 SSPA2251 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143098.1 2511514 R 554290 CDS YP_002143099.1 197363462 complement(2511695..2511976) 1 NC_011147.1 similar to |1130605|emb|CAA64001.1| c1 [Bacteriophage L]; transcriptional activator-regulatory protein 2511976 554290002412 SSPA2252 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator-regulatory protein YP_002143099.1 2511695 R 554290 CDS YP_002143100.1 197363463 2512413..2513102 1 NC_011147.1 similar to |1350835|sp|P18680|RPC1_BPHK0 26 kDa repressor protein (Regulatory protein CI); transcriptional activator-regulatory protein 2513102 554290002413 SSPA2253 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator-regulatory protein YP_002143100.1 2512413 D 554290 CDS YP_002143101.1 197363464 2514317..2514619 1 NC_011147.1 similar to |9635514|ref|NP_059605.1| antitermination protein [Enterobacteria phage P22]; hypothetical protein 2514619 554290002414 SSPA2254 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143101.1 2514317 D 554290 CDS YP_002143102.1 197363465 complement(2514632..2515219) 1 NC_011147.1 similar to |9635513|ref|NP_059604.1| superinfection exclusion protein [Enterobacteria phage P22]; superinfection exclusion 2515219 554290002415 SSPA2255 Salmonella enterica subsp. enterica serovar Paratyphi A str. superinfection exclusion YP_002143102.1 2514632 R 554290 CDS YP_002143103.1 197363466 2515433..2515627 1 NC_011147.1 antirestriction protein 2515627 554290002416 SSPA2256 Salmonella enterica subsp. enterica serovar Paratyphi A str. antirestriction protein YP_002143103.1 2515433 D 554290 CDS YP_002143104.1 197363467 2515664..2515957 1 NC_011147.1 similar to |9635511|ref|NP_059602.1| ORF78 [Enterobacteria phage P22]; hypothetical protein 2515957 554290002417 SSPA2257 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143104.1 2515664 D 554290 CDS YP_002143105.1 197363468 2516272..2516424 1 NC_011147.1 similar to |13559838|ref|NP_112048.1| regulatory protein cIII [Bacteriophage HK620]; hypothetical protein 2516424 554290002418 SSPA2258 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143105.1 2516272 D 554290 CDS YP_002143106.1 197363469 2516405..2516593 1 NC_011147.1 similar to |9635507|ref|NP_059598.1| kil protein [Enterobacteria phage P22]; hypothetical protein 2516593 554290002419 SSPA2259 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143106.1 2516405 D 554290 CDS YP_002143107.1 197363470 2516583..2516726 1 NC_011147.1 similar to |227865|prf||1712369A accessory recombination function gene; hypothetical protein 2516726 554290002420 SSPA2260 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143107.1 2516583 D 554290 CDS YP_002143108.1 197363471 2516852..2517430 1 NC_011147.1 similar to |41057306|ref|NP_958204.1| gene 28 protein [Enterobacteria phage Sf6]; hypothetical protein 2517430 554290002421 SSPA2261 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143108.1 2516852 D 554290 CDS YP_002143109.1 197363472 2517430..2517714 1 NC_011147.1 similar to |9635504|ref|NP_059595.1| anti-RecBCD [Enterobacteria phage P22]; hypothetical protein 2517714 554290002422 SSPA2262 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143109.1 2517430 D 554290 CDS YP_002143110.1 197363473 2517761..2518054 1 NC_011147.1 similar to |9635503|ref|NP_059594.1| anti-RecBCD [Enterobacteria phage P22]; hypothetical protein 2518054 554290002423 SSPA2263 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143110.1 2517761 D 554290 CDS YP_002143111.1 197363474 2518065..2518235 1 NC_011147.1 ORF56; similar to |13559832|ref|NP_112042.1| unknown [Bacteriophage HK620]; hypothetical protein 2518235 554290002424 SSPA2264 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143111.1 2518065 D 554290 CDS YP_002143112.1 197363475 2518888..2519388 1 NC_011147.1 ORF109; similar to |13559830|ref|NP_112040.1| unknown [Bacteriophage HK620]; hypothetical protein 2519388 554290002425 SSPA2265 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143112.1 2518888 D 554290 CDS YP_002143113.1 197363476 2520154..2521239 1 NC_011147.1 similar to |9635497|ref|NP_059588.1| eaa [Enterobacteria phage P22]; hypothetical protein 2521239 554290002426 SSPA2266 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143113.1 2520154 D 554290 CDS YP_002143114.2 449784967 2521232..2521516 1 NC_011147.1 similar to |9633400|ref|NP_050503.1| hypothetical protein VT2-Sap04 [Bacteriophage VT2-Sa]; hypothetical protein 2521516 554290002427 SSPA2267 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143114.2 2521232 D 554290 CDS YP_002143115.1 197363478 2521728..2522078 1 NC_011147.1 similar to |19548990|ref|NP_599059.1| excisionase [Shigella flexneri bacteriophage V]; excisionase 2522078 554290002428 SSPA2268 Salmonella enterica subsp. enterica serovar Paratyphi A str. excisionase YP_002143115.1 2521728 D 554290 CDS YP_002143116.1 197363479 2521955..2523118 1 NC_011147.1 similar to |9635493|ref|NP_059584.1| integrase [Enterobacteria phage P22]; integrase 2523118 554290002429 SSPA2269 Salmonella enterica subsp. enterica serovar Paratyphi A str. integrase YP_002143116.1 2521955 D 554290 CDS YP_002143117.1 197363480 complement(2523324..2524574) 1 NC_011147.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 2524574 proA 554290002431 proA Salmonella enterica subsp. enterica serovar Paratyphi A str. gamma-glutamyl phosphate reductase YP_002143117.1 2523324 R 554290 CDS YP_002143118.1 197363481 complement(2524586..2525689) 1 NC_011147.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 2525689 554290002432 SSPA2271 Salmonella enterica subsp. enterica serovar Paratyphi A str. gamma-glutamyl kinase YP_002143118.1 2524586 R 554290 CDS YP_002143119.1 197363482 2525972..2527024 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane pore protein E precursor; outer membrane phosphoporin protein E 2527024 554290002433 SSPA2272 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane phosphoporin protein E YP_002143119.1 2525972 D 554290 CDS YP_002143120.1 197363483 complement(2527075..2527476) 1 NC_011147.1 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl 2527476 554290002434 SSPA2274 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator Crl YP_002143120.1 2527075 R 554290 CDS YP_002143121.1 197363484 complement(2527534..2528778) 1 NC_011147.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 2528778 frsA 554290002435 frsA Salmonella enterica subsp. enterica serovar Paratyphi A str. fermentation/respiration switch protein YP_002143121.1 2527534 R 554290 CDS YP_002143122.1 197363485 complement(2528867..2529325) 1 NC_011147.1 'catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively'; xanthine-guanine phosphoribosyltransferase 2529325 554290002436 SSPA2276 Salmonella enterica subsp. enterica serovar Paratyphi A str. xanthine-guanine phosphoribosyltransferase YP_002143122.1 2528867 R 554290 CDS YP_002143123.1 197363486 2529574..2531031 1 NC_011147.1 similar to Salmonella typhi CT18 aminoacyl-histidine dipeptidase precursor; aminoacyl-histidine dipeptidase 2531031 554290002437 SSPA2277 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminoacyl-histidine dipeptidase YP_002143123.1 2529574 D 554290 CDS YP_002143124.1 197363487 complement(2531186..2531800) 1 NC_011147.1 similar to release factor 1 and 2; peptide chain release factor-like protein 2531800 prfH 554290002438 prfH Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide chain release factor-like protein YP_002143124.1 2531186 R 554290 CDS YP_002143125.1 197363488 complement(2531797..2532936) 1 NC_011147.1 mutations in this gene result in a compromised ability for drug-inducible mexXY expression; expression is inducible by the same ribosome-targeting agents that induce mexXY; hypothetical protein 2532936 554290002439 SSPA2279 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143125.1 2531797 R 554290 CDS YP_002143126.1 197363489 complement(2533155..2534210) 1 NC_011147.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2534210 554290002440 SSPA2280 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase IV YP_002143126.1 2533155 R 554290 CDS YP_002143127.1 197363490 2534460..2535200 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2535200 554290002441 SSPA2281 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143127.1 2534460 D 554290 CDS YP_002143128.1 197363491 complement(2535171..2535938) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2535938 554290002442 SSPA2282 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143128.1 2535171 R 554290 CDS YP_002143129.1 197363492 complement(2536102..2536680) 1 NC_011147.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 2536680 gmhA 554290002443 gmhA Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoheptose isomerase YP_002143129.1 2536102 R 554290 CDS YP_002143130.1 197363493 2536920..2539364 1 NC_011147.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2539364 fadE 554290002444 fadE Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl-CoA dehydrogenase YP_002143130.1 2536920 D 554290 CDS YP_002143131.1 197363494 2539473..2540240 1 NC_011147.1 similar to Salmonella typhi CT18 possible hydrolase; hypothetical protein 2540240 554290002445 SSPA2285 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143131.1 2539473 D 554290 CDS YP_002143132.1 197363495 2540611..2541018 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2541018 554290002446 SSPA2286 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143132.1 2540611 D 554290 CDS YP_002143133.1 197363496 2541349..2542068 1 NC_011147.1 similar to Salmonella typhi CT18 possible outer membrane adhesin; outer membrane adhesin 2542068 554290002447 SSPA2287 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane adhesin YP_002143133.1 2541349 D 554290 CDS YP_002143134.1 197363497 complement(2542072..2542200) 1 NC_011147.1 hypothetical protein 2542200 554290002448 SSPA2288 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143134.1 2542072 R 554290 CDS YP_002143135.1 197363498 2542373..2542567 1 NC_011147.1 hypothetical protein 2542567 554290002449 SSPA2289 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143135.1 2542373 D 554290 CDS YP_002143136.1 197363499 complement(2543788..2544243) 1 NC_011147.1 similar to Salmonella typhi Ty2 transcriptional regulator; transcriptional regulator 2544243 554290002451 SSPA2290 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002143136.1 2543788 R 554290 CDS YP_002143137.1 197363500 complement(2544376..2545455) 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrail protein; fimbrial protein 2545455 554290002452 SSPA2291 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002143137.1 2544376 R 554290 CDS YP_002143138.1 197363501 complement(2545478..2548165) 1 NC_011147.1 outermembrane fimbrial usher protein 2548165 554290002453 SSPA2292 Salmonella enterica subsp. enterica serovar Paratyphi A str. outermembrane fimbrial usher protein YP_002143138.1 2545478 R 554290 CDS YP_002143139.1 197363502 complement(2548274..2548849) 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2548849 554290002454 SSPA2293 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002143139.1 2548274 R 554290 CDS YP_002143140.1 197363503 complement(2548900..2549610) 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrial protein; fimbrial protein 2549610 554290002455 SSPA2294 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002143140.1 2548900 R 554290 CDS YP_002143142.1 197363505 complement(2551261..2551428) 1 NC_011147.1 similar to |1915951|emb|CAB06027.1| transposase ORFA [Salmonella enteritidis]; hypothetical protein 2551428 554290002457 SSPA2296 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143142.1 2551261 R 554290 CDS YP_002143143.1 197363506 complement(2551503..2551628) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2551628 554290002458 SSPA2297 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143143.1 2551503 R 554290 CDS YP_002143144.1 197363507 complement(2551748..2552692) 1 NC_011147.1 similar to Salmonella typhi CT18 LysR-family transcriptional regulator SinR; LysR family transcriptional regulator 2552692 554290002459 SSPA2298 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002143144.1 2551748 R 554290 CDS YP_002143145.1 197363508 complement(2553512..2554333) 1 NC_011147.1 ybeJ-like protein 2554333 554290002461 SSPA2299 Salmonella enterica subsp. enterica serovar Paratyphi A str. ybeJ-like protein YP_002143145.1 2553512 R 554290 CDS YP_002143146.1 197363509 complement(2555233..2557743) 1 NC_011147.1 similar to Salmonella typhi CT18 outer-membrane fimbrial usher protein; outer-membrane fimbrial usher protein 2557743 554290002463 SSPA2300 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer-membrane fimbrial usher protein YP_002143146.1 2555233 R 554290 CDS YP_002143147.1 197363510 complement(2557767..2558507) 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic fimbrial chaperone protein; periplasmic fimbrial chaperone protein 2558507 554290002464 SSPA2301 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic fimbrial chaperone protein YP_002143147.1 2557767 R 554290 CDS YP_002143148.1 197363511 complement(2559208..2559702) 1 NC_011147.1 similar to Salmonella typhi Ty2 probable lipoprotein; lipoprotein 2559702 554290002466 SSPA2302 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143148.1 2559208 R 554290 CDS YP_002143149.1 197363512 2561239..2561553 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2561553 554290002469 SSPA2305 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143149.1 2561239 D 554290 CDS YP_002143150.1 197363513 complement(2564322..2564633) 1 NC_011147.1 similar to |37528110|ref|NP_931455.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; hypothetical protein 2564633 554290002471 SSPA2306 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143150.1 2564322 R 554290 CDS YP_002143151.1 197363514 complement(2564653..2569365) 1 NC_011147.1 Rhs-family protein 2569365 554290002472 SSPA2306a Salmonella enterica subsp. enterica serovar Paratyphi A str. Rhs-family protein YP_002143151.1 2564653 R 554290 CDS YP_002143152.1 197363515 complement(2569899..2572145) 1 NC_011147.1 similar to |22988322|ref|ZP_00033389.1| COG3501: Uncharacterized protein conserved in bacteria [Burkholderia fungorum]; hypothetical protein 2572145 554290002473 SSPA2307 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143152.1 2569899 R 554290 CDS YP_002143153.1 197363516 complement(2572177..2572638) 1 NC_011147.1 similar to |16124062|ref|NP_407375.1| hypothetical protein [Yersinia pestis]; hypothetical protein 2572638 554290002474 SSPA2308 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143153.1 2572177 R 554290 CDS YP_002143154.1 197363517 complement(2572640..2573383) 1 NC_011147.1 similar to |16123243|ref|NP_406556.1| hypothetical protein [Yersinia pestis]; hypothetical protein 2573383 554290002475 SSPA2309 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143154.1 2572640 R 554290 CDS YP_002143155.1 197363518 complement(2573468..2573929) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2573929 554290002476 SSPA2310 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143155.1 2573468 R 554290 CDS YP_002143156.1 197363519 complement(2573914..2574384) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2574384 554290002477 SSPA2311 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143156.1 2573914 R 554290 CDS YP_002143157.1 197363520 complement(2574488..2574961) 1 NC_011147.1 similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2574961 554290002478 SSPA2312 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143157.1 2574488 R 554290 CDS YP_002143158.1 197363521 complement(2575458..2576225) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2576225 554290002480 SSPA2313 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143158.1 2575458 R 554290 CDS YP_002143159.1 197363522 complement(2576225..2580085) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 2580085 554290002481 SSPA2314 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002143159.1 2576225 R 554290 CDS YP_002143160.1 197363523 complement(2580119..2580550) 1 NC_011147.1 similar to Salmonella typhimurium shiga-like toxin A subunit; shiga-like toxin A subunit 2580550 554290002482 SSPA2315 Salmonella enterica subsp. enterica serovar Paratyphi A str. shiga-like toxin A subunit YP_002143160.1 2580119 R 554290 CDS YP_002143161.1 197363524 complement(2580752..2581525) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2581525 554290002483 SSPA2316 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143161.1 2580752 R 554290 CDS YP_002143162.1 197363525 complement(2581530..2582834) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2582834 554290002484 SSPA2317 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143162.1 2581530 R 554290 CDS YP_002143163.1 197363526 complement(2582831..2584174) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2584174 554290002485 SSPA2318 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143163.1 2582831 R 554290 CDS YP_002143164.1 197363527 complement(2584178..2584714) 1 NC_011147.1 similar to Salmonella typhi CT18 probable lipoprotein; lipoprotein 2584714 554290002486 SSPA2319 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143164.1 2584178 R 554290 CDS YP_002143165.1 197363528 complement(2584782..2585267) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2585267 554290002487 SSPA2320 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143165.1 2584782 R 554290 CDS YP_002143166.1 197363529 complement(2585410..2585793) 1 NC_011147.1 similar to Salmonella typhimurium periplasmic protein; hypothetical protein 2585793 554290002488 SSPA2321 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143166.1 2585410 R 554290 CDS YP_002143167.1 197363530 complement(2585778..2586263) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2586263 554290002489 SSPA2322 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143167.1 2585778 R 554290 CDS YP_002143168.1 197363531 complement(2586374..2586490) 1 NC_011147.1 hypothetical protein 2586490 554290002490 SSPA2323 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143168.1 2586374 R 554290 CDS YP_002143169.1 197363532 complement(2586557..2587042) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2587042 554290002491 SSPA2324 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143169.1 2586557 R 554290 CDS YP_002143170.1 197363533 complement(2587294..2587626) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2587626 554290002492 SSPA2325 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143170.1 2587294 R 554290 CDS YP_002143171.1 197363534 complement(2588206..2589714) 1 NC_011147.1 similar to |22983766|ref|ZP_00028937.1| COG3517: Uncharacterized protein conserved in bacteria [Burkholderia fungorum]; hypothetical protein 2589714 554290002493 SSPA2326 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143171.1 2588206 R 554290 CDS YP_002143172.1 197363535 complement(2589738..2590280) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2590280 554290002494 SSPA2327 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143172.1 2589738 R 554290 CDS YP_002143173.1 197363536 complement(2590342..2590632) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2590632 554290002495 SSPA2328 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143173.1 2590342 R 554290 CDS YP_002143174.1 197363537 complement(2590635..2590733) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2590733 554290002496 SSPA2329 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143174.1 2590635 R 554290 CDS YP_002143175.1 197363538 complement(2590718..2593381) 1 NC_011147.1 similar to Salmonella typhi CT18 ClpB-like protein; ClpB-like protein 2593381 554290002497 SSPA2330 Salmonella enterica subsp. enterica serovar Paratyphi A str. ClpB-like protein YP_002143175.1 2590718 R 554290 CDS YP_002143176.1 197363539 2594638..2595462 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2595462 554290002499 SSPA2331 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143176.1 2594638 D 554290 CDS YP_002143177.1 197363540 2595459..2595953 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2595953 554290002500 SSPA2332 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143177.1 2595459 D 554290 CDS YP_002143178.1 197363541 2595969..2597852 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2597852 554290002501 SSPA2333 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143178.1 2595969 D 554290 CDS YP_002143179.1 197363542 2597849..2598844 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2598844 554290002502 SSPA2334 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143179.1 2597849 D 554290 CDS YP_002143180.1 197363543 2598855..2599898 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2599898 554290002503 SSPA2335 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143180.1 2598855 D 554290 CDS YP_002143181.1 197363544 complement(2600429..2601160) 1 NC_011147.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 2601160 554290002505 SSPA2336 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit epsilon YP_002143181.1 2600429 R 554290 CDS YP_002143182.1 197363545 2601224..2601691 1 NC_011147.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2601691 rnhA 554290002506 rnhA Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease H YP_002143182.1 2601224 D 554290 CDS YP_002143183.1 197363546 complement(2601688..2602410) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2602410 554290002507 SSPA2338 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143183.1 2601688 R 554290 CDS YP_002143184.1 197363547 2602445..2603200 1 NC_011147.1 catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione; hydroxyacylglutathione hydrolase 2603200 554290002508 SSPA2339 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroxyacylglutathione hydrolase YP_002143184.1 2602445 D 554290 CDS YP_002143185.1 197363548 2603272..2604639 1 NC_011147.1 'catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall'; membrane-bound lytic murein transglycosylase D 2604639 mltD 554290002509 mltD Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane-bound lytic murein transglycosylase D YP_002143185.1 2603272 D 554290 CDS YP_002143186.1 197363549 complement(2604695..2605465) 1 NC_011147.1 similar to Salmonella typhi CT18 methyltransferase; methyltransferase 2605465 554290002510 SSPA2341 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyltransferase YP_002143186.1 2604695 R 554290 CDS YP_002143187.1 197363550 complement(2605543..2606322) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2606322 554290002511 SSPA2342 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143187.1 2605543 R 554290 CDS YP_002143188.1 197363551 complement(2606475..2607650) 1 NC_011147.1 similar to Salmonella typhi CT18 drug efflux protein; drug efflux protein 2607650 554290002512 SSPA2343 Salmonella enterica subsp. enterica serovar Paratyphi A str. drug efflux protein YP_002143188.1 2606475 R 554290 CDS YP_002143189.1 197363552 2607755..2608669 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical transcriptional regulator; hypothetical protein 2608669 554290002513 SSPA2344 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143189.1 2607755 D 554290 CDS YP_002143190.1 197363553 complement(2608691..2609494) 1 NC_011147.1 'catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid'; 2,5-diketo-D-gluconate reductase B 2609494 dkgB 554290002514 dkgB Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,5-diketo-D-gluconate reductase B YP_002143190.1 2608691 R 554290 CDS YP_002143191.1 197363554 complement(2615497..2618070) 1 NC_011147.1 similar to Salmonella typhi CT18 ClpB protein (heat shock protein f84.1); protein disaggregation chaperone 2618070 554290002520 SSPA2346 Salmonella enterica subsp. enterica serovar Paratyphi A str. protein disaggregation chaperone YP_002143191.1 2615497 R 554290 CDS YP_002143192.1 197363555 complement(2618200..2618931) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2618931 554290002521 SSPA2347 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143192.1 2618200 R 554290 CDS YP_002143193.1 197363556 complement(2618928..2619908) 1 NC_011147.1 'responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA'; 23S rRNA pseudouridine synthase D 2619908 rluD 554290002522 rluD Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA pseudouridine synthase D YP_002143193.1 2618928 R 554290 CDS YP_002143194.1 197363557 2620040..2620777 1 NC_011147.1 'with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline'; outer membrane protein assembly complex subunit YfiO 2620777 554290002523 SSPA2349 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein assembly complex subunit YfiO YP_002143194.1 2620040 D 554290 CDS YP_002143195.1 197363558 2621049..2621387 1 NC_011147.1 associated with 30S ribosomal subunit; interferes with translation elongation; translation inhibitor protein RaiA 2621387 554290002524 SSPA2350 Salmonella enterica subsp. enterica serovar Paratyphi A str. translation inhibitor protein RaiA YP_002143195.1 2621049 D 554290 CDS YP_002143196.1 197363559 2621638..2622798 1 NC_011147.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 2622798 pheA 554290002525 pheA Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional chorismate mutase/prephenate dehydratase YP_002143196.1 2621638 D 554290 CDS YP_002143197.1 197363560 complement(2622759..2623667) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2623667 554290002526 SSPA2352 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143197.1 2622759 R 554290 CDS YP_002143198.1 197363561 complement(2623725..2624792) 1 NC_011147.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 2624792 tyrA 554290002527 tyrA Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional chorismate mutase/prephenate dehydrogenase YP_002143198.1 2623725 R 554290 CDS YP_002143199.1 197363562 complement(2624856..2625926) 1 NC_011147.1 'catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive'; phospho-2-dehydro-3-deoxyheptonate aldolase 2625926 554290002528 SSPA2354 Salmonella enterica subsp. enterica serovar Paratyphi A str. phospho-2-dehydro-3-deoxyheptonate aldolase YP_002143199.1 2624856 R 554290 CDS YP_002143200.1 197363563 2626366..2626884 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2626884 554290002529 SSPA2355 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143200.1 2626366 D 554290 CDS YP_002143201.1 197363564 2626877..2628097 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2628097 554290002530 SSPA2356 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143201.1 2626877 D 554290 CDS YP_002143202.1 197363565 complement(2628254..2628601) 1 NC_011147.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 2628601 rplS 554290002531 rplS Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L19 YP_002143202.1 2628254 R 554290 CDS YP_002143203.1 197363566 complement(2628642..2629409) 1 NC_011147.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 2629409 trmD 554290002532 trmD Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA (guanine-N(1)-)-methyltransferase YP_002143203.1 2628642 R 554290 CDS YP_002143204.1 197363567 complement(2629454..2630002) 1 NC_011147.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 2630002 rimM 554290002533 rimM Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S rRNA-processing protein RimM YP_002143204.1 2629454 R 554290 CDS YP_002143205.1 197363568 complement(2630021..2630269) 1 NC_011147.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2630269 rpsP 554290002534 rpsP Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S16 YP_002143205.1 2630021 R 554290 CDS YP_002143206.1 197363569 complement(2630521..2631882) 1 NC_011147.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 2631882 554290002535 SSPA2361 Salmonella enterica subsp. enterica serovar Paratyphi A str. signal recognition particle protein YP_002143206.1 2630521 R 554290 CDS YP_002143207.1 197363570 2632048..2632839 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2632839 554290002536 SSPA2362 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143207.1 2632048 D 554290 CDS YP_002143208.1 197363571 2632946..2634145 1 NC_011147.1 similar to Salmonella typhi Ty2 membrane protein; hypothetical protein 2634145 554290002537 SSPA2363 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143208.1 2632946 D 554290 CDS YP_002143209.1 197363572 2634275..2634880 1 NC_011147.1 hypothetical protein 2634880 554290002538 SSPA2364 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143209.1 2634275 D 554290 CDS YP_002143210.1 197363573 complement(2634921..2635511) 1 NC_011147.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 2635511 554290002539 SSPA2365 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat shock protein GrpE YP_002143210.1 2634921 R 554290 CDS YP_002143211.1 197363574 complement(2635508..2635702) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2635702 554290002540 SSPA2366 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143211.1 2635508 R 554290 CDS YP_002143212.1 197363575 2635634..2636512 1 NC_011147.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2636512 ppnK 554290002541 ppnK Salmonella enterica subsp. enterica serovar Paratyphi A str. inorganic polyphosphate/ATP-NAD kinase YP_002143212.1 2635634 D 554290 CDS YP_002143213.1 197363576 2636598..2638259 1 NC_011147.1 similar to Salmonella typhi CT18 DNA repair protein; recombination and repair protein 2638259 554290002542 SSPA2368 Salmonella enterica subsp. enterica serovar Paratyphi A str. recombination and repair protein YP_002143213.1 2636598 D 554290 CDS YP_002143214.2 449784968 2638408..2638746 1 NC_011147.1 similar to Salmonella typhi CT18 small protein A; hypothetical protein 2638746 554290002543 SSPA2369 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143214.2 2638408 D 554290 CDS YP_002143215.1 197363578 complement(2638912..2639187) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2639187 554290002544 SSPA2370 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143215.1 2638912 R 554290 CDS YP_002143216.1 197363579 complement(2639192..2639629) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2639629 554290002545 SSPA2371 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143216.1 2639192 R 554290 CDS YP_002143217.1 197363580 2639817..2640299 1 NC_011147.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; ssrA-binding protein 2640299 smpB 554290002546 smpB Salmonella enterica subsp. enterica serovar Paratyphi A str. ssrA-binding protein YP_002143217.1 2639817 D 554290 CDS YP_002143218.1 197363581 2640918..2652392 1 NC_011147.1 similar to Salmonella typhi CT18 large repetitive protein; hypothetical protein 2652392 554290002547 SSPA2373 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143218.1 2640918 D 554290 CDS YP_002143219.1 197363582 2652457..2653866 1 NC_011147.1 similar to Salmonella typhi CT18 type I secretion protein; type I secretion protein 2653866 554290002548 SSPA2374 Salmonella enterica subsp. enterica serovar Paratyphi A str. type I secretion protein YP_002143219.1 2652457 D 554290 CDS YP_002143220.1 197363583 2653863..2656043 1 NC_011147.1 'similar to Salmonella typhi CT18 type I secretion protein, ATP-binding protein; SNP @ nt785; Sanger - a, McClelland - g (ancestral); nonsynonymous (D/G @ aa262)'; type I secretion protein ATP-binding protein 2656043 554290002549 SSPA2375 Salmonella enterica subsp. enterica serovar Paratyphi A str. type I secretion protein ATP-binding protein YP_002143220.1 2653863 D 554290 CDS YP_002143221.1 197363584 2656051..2657214 1 NC_011147.1 similar to Salmonella typhi CT18 type I secretion protein; type I secretion protein 2657214 554290002550 SSPA2376 Salmonella enterica subsp. enterica serovar Paratyphi A str. type I secretion protein YP_002143221.1 2656051 D 554290 CDS YP_002143222.1 197363585 2657744..2658121 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2658121 554290002552 SSPA2377 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143222.1 2657744 D 554290 CDS YP_002143223.1 197363586 complement(2658208..2658426) 1 NC_011147.1 similar to Salmonella typhi CT18 positive regulator of late gene transcription; positive regulator of late gene transcription 2658426 554290002553 SSPA2378 Salmonella enterica subsp. enterica serovar Paratyphi A str. positive regulator of late gene transcription YP_002143223.1 2658208 R 554290 CDS YP_002143224.1 197363587 complement(2658494..2659594) 1 NC_011147.1 similar to Salmonella typhi CT18 regulator of late gene expression; regulator of late gene expression 2659594 554290002554 SSPA2379 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulator of late gene expression YP_002143224.1 2658494 R 554290 CDS YP_002143225.1 197363588 complement(2659591..2660076) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail protein; phage tail protein 2660076 554290002555 SSPA2380 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail protein YP_002143225.1 2659591 R 554290 CDS YP_002143226.1 197363589 complement(2660076..2662856) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2662856 554290002556 SSPA2381 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143226.1 2660076 R 554290 CDS YP_002143227.1 197363590 complement(2662849..2662968) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2662968 554290002557 SSPA2382 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143227.1 2662849 R 554290 CDS YP_002143228.1 197363591 complement(2662983..2663285) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail protein; phage tail protein 2663285 554290002558 SSPA2383 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail protein YP_002143228.1 2662983 R 554290 CDS YP_002143229.1 197363592 complement(2663340..2663855) 1 NC_011147.1 similar to Salmonella typhi CT18 probable major tail tube protein; major tail tube protein 2663855 554290002559 SSPA2384 Salmonella enterica subsp. enterica serovar Paratyphi A str. major tail tube protein YP_002143229.1 2663340 R 554290 CDS YP_002143230.1 197363593 complement(2663865..2665037) 1 NC_011147.1 similar to Salmonella typhi CT18 probable major tail sheath protein; major tail sheath protein 2665037 554290002560 SSPA2385 Salmonella enterica subsp. enterica serovar Paratyphi A str. major tail sheath protein YP_002143230.1 2663865 R 554290 CDS YP_002143231.1 197363594 complement(2665140..2665358) 1 NC_011147.1 similar to Escherichia coli K12 inversion of adjacent DNA; at locus of e14 element; inversion of adjacent DNA; at locus of e14 element 2665358 554290002561 SSPA2386 Salmonella enterica subsp. enterica serovar Paratyphi A str. inversion of adjacent DNA; at locus of e14 element YP_002143231.1 2665140 R 554290 CDS YP_002143232.1 197363595 2665572..2666294 1 NC_011147.1 similar to Salmonella typhi Ty2 invasion-associated secreted protein.; invasion-associated secreted protein 2666294 554290002562 SSPA2387 Salmonella enterica subsp. enterica serovar Paratyphi A str. invasion-associated secreted protein YP_002143232.1 2665572 D 554290 CDS YP_002143233.1 197363596 complement(2666492..2666899) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail fibre protein; phage tail fiber protein 2666899 554290002563 SSPA2388 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail fiber protein YP_002143233.1 2666492 R 554290 CDS YP_002143234.1 197363597 complement(2666906..2668525) 1 NC_011147.1 similar to Salmonella typhi Ty2 probable phage tail fiber protein; phage tail fiber protein 2668525 554290002564 SSPA2389 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail fiber protein YP_002143234.1 2666906 R 554290 CDS YP_002143235.1 197363598 complement(2668522..2669127) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail protein; phage tail protein 2669127 554290002565 SSPA2390 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail protein YP_002143235.1 2668522 R 554290 CDS YP_002143236.1 197363599 complement(2669120..2670028) 1 NC_011147.1 similar to Salmonella typhi CT18 probable phage baseplate assembly protein; phage baseplate assembly protein 2670028 554290002566 SSPA2391 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage baseplate assembly protein YP_002143236.1 2669120 R 554290 CDS YP_002143237.1 197363600 complement(2670015..2670374) 1 NC_011147.1 similar to Salmonella typhi CT18 phage baseplate assembly protein; phage baseplate assembly protein 2670374 554290002567 SSPA2392 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage baseplate assembly protein YP_002143237.1 2670015 R 554290 CDS YP_002143238.1 197363601 complement(2670371..2670949) 1 NC_011147.1 similar to Salmonella typhi CT18 phage baseplate assembly protein; phage baseplate assembly protein 2670949 554290002568 SSPA2393 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage baseplate assembly protein YP_002143238.1 2670371 R 554290 CDS YP_002143239.1 197363602 complement(2671018..2671464) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail completion protein; phage tail completion protein 2671464 554290002569 SSPA2394 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail completion protein YP_002143239.1 2671018 R 554290 CDS YP_002143240.1 197363603 complement(2671457..2671888) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail protein; phage tail protein 2671888 554290002570 SSPA2395 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail protein YP_002143240.1 2671457 R 554290 CDS YP_002143241.1 197363604 complement(2671984..2672409) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 2672409 554290002571 SSPA2396 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002143241.1 2671984 R 554290 CDS YP_002143242.1 197363605 complement(2672409..2672786) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2672786 554290002572 SSPA2397 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143242.1 2672409 R 554290 CDS YP_002143243.1 197363606 complement(2672791..2673261) 1 NC_011147.1 similar to Salmonella typhi Ty2 lysozyme; lysozyme 2673261 554290002573 SSPA2398 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysozyme YP_002143243.1 2672791 R 554290 CDS YP_002143244.1 197363607 complement(2673281..2673496) 1 NC_011147.1 similar to Salmonella typhi Ty2 possible secretion protein; secretion protein 2673496 554290002574 SSPA2399 Salmonella enterica subsp. enterica serovar Paratyphi A str. secretion protein YP_002143244.1 2673281 R 554290 CDS YP_002143245.1 197363608 complement(2673500..2673703) 1 NC_011147.1 similar to Salmonella typhi CT18 phage tail protein; phage tail protein 2673703 554290002575 SSPA2400 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail protein YP_002143245.1 2673500 R 554290 CDS YP_002143246.1 197363609 complement(2673703..2674167) 1 NC_011147.1 similar to Salmonella typhi CT18 capsid completion protein; capsid completion protein 2674167 554290002576 SSPA2401 Salmonella enterica subsp. enterica serovar Paratyphi A str. capsid completion protein YP_002143246.1 2673703 R 554290 CDS YP_002143247.1 197363610 complement(2674261..2674911) 1 NC_011147.1 similar to Salmonella typhi CT18 phage terminase; phage terminase 2674911 554290002577 SSPA2402 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage terminase YP_002143247.1 2674261 R 554290 CDS YP_002143248.1 197363611 complement(2674915..2675979) 1 NC_011147.1 similar to Salmonella typhi CT18 major capsid protein; major capsid protein 2675979 554290002578 SSPA2403 Salmonella enterica subsp. enterica serovar Paratyphi A str. major capsid protein YP_002143248.1 2674915 R 554290 CDS YP_002143249.1 197363612 complement(2675996..2676829) 1 NC_011147.1 similar to Salmonella typhi CT18 capsid protein; capsid protein 2676829 554290002579 SSPA2404 Salmonella enterica subsp. enterica serovar Paratyphi A str. capsid protein YP_002143249.1 2675996 R 554290 CDS YP_002143250.1 197363613 2676972..2678738 1 NC_011147.1 similar to Salmonella typhi CT18 probable terminase subunit; terminase subunit 2678738 554290002580 SSPA2405 Salmonella enterica subsp. enterica serovar Paratyphi A str. terminase subunit YP_002143250.1 2676972 D 554290 CDS YP_002143251.1 197363614 2678738..2679781 1 NC_011147.1 similar to Salmonella typhi CT18 probable capsid portal protein; capsid portal protein 2679781 554290002581 SSPA2406 Salmonella enterica subsp. enterica serovar Paratyphi A str. capsid portal protein YP_002143251.1 2678738 D 554290 CDS YP_002143252.1 197363615 complement(2679830..2680525) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2680525 554290002582 SSPA2407 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143252.1 2679830 R 554290 CDS YP_002143253.1 197363616 complement(2680545..2681609) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2681609 554290002583 SSPA2408 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143253.1 2680545 R 554290 CDS YP_002143254.1 197363617 complement(2681606..2682670) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2682670 554290002584 SSPA2409 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143254.1 2681606 R 554290 CDS YP_002143255.1 197363618 complement(2682680..2682898) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2682898 554290002585 SSPA2410 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143255.1 2682680 R 554290 CDS YP_002143256.1 197363619 complement(2682994..2683227) 1 NC_011147.1 similar to |34335033|gb|AAQ65008.1| unknown [synthetic construct]; hypothetical protein 2683227 554290002586 SSPA2411 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143256.1 2682994 R 554290 CDS YP_002143257.1 197363620 complement(2683239..2683427) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2683427 554290002587 SSPA2412 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143257.1 2683239 R 554290 CDS YP_002143258.1 197363621 complement(2683595..2685997) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2685997 554290002588 SSPA2413 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143258.1 2683595 R 554290 CDS YP_002143259.1 197363622 complement(2685988..2686848) 1 NC_011147.1 similar to Salmonella typhi CT18 DNA adenine methylase; DNA adenine methylase 2686848 554290002589 SSPA2414 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA adenine methylase YP_002143259.1 2685988 R 554290 CDS YP_002143260.1 197363623 complement(2686845..2687429) 1 NC_011147.1 similar to Salmonella typhi CT18 exonuclease; exonuclease 2687429 554290002590 SSPA2415 Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease YP_002143260.1 2686845 R 554290 CDS YP_002143261.1 197363624 complement(2687426..2687653) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2687653 554290002591 SSPA2416 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143261.1 2687426 R 554290 CDS YP_002143262.1 197363625 complement(2687653..2687886) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2687886 554290002592 SSPA2417 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143262.1 2687653 R 554290 CDS YP_002143263.1 197363626 complement(2687954..2688295) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2688295 554290002593 SSPA2418 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143263.1 2687954 R 554290 CDS YP_002143264.1 197363627 complement(2688259..2688459) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2688459 554290002594 SSPA2419 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143264.1 2688259 R 554290 CDS YP_002143265.1 197363628 complement(2688467..2688976) 1 NC_011147.1 similar to Salmonella typhi CT18 phage regulatory protein; phage regulatory protein 2688976 554290002595 SSPA2420 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage regulatory protein YP_002143265.1 2688467 R 554290 CDS YP_002143266.1 197363629 complement(2689009..2689251) 1 NC_011147.1 similar to Salmonella typhi CT18 phage regulatory protein; phage regulatory protein 2689251 554290002596 SSPA2421 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage regulatory protein YP_002143266.1 2689009 R 554290 CDS YP_002143267.1 197363630 2689368..2690000 1 NC_011147.1 similar to Salmonella typhi CT18 phage repressor protein cI; phage repressor protein cI 2690000 554290002597 SSPA2422 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage repressor protein cI YP_002143267.1 2689368 D 554290 CDS YP_002143268.1 197363631 2690004..2691029 1 NC_011147.1 similar to Salmonella typhi CT18 phage integrase; phage integrase 2691029 554290002598 SSPA2423 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage integrase YP_002143268.1 2690004 D 554290 CDS YP_002143269.1 197363632 2691562..2692320 1 NC_011147.1 similar to Salmonella typhi CT18 probable bacteriophage integrase; bacteriophage integrase 2692320 554290002599 SSPA2424 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriophage integrase YP_002143269.1 2691562 D 554290 CDS YP_002143270.1 197363633 complement(2693146..2694264) 1 NC_011147.1 No database matches; hypothetical protein 2694264 554290002600 SSPA2424a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143270.1 2693146 R 554290 CDS YP_002143271.1 197363634 complement(2694944..2696644) 1 NC_011147.1 similar to |37527900|ref|NP_931245.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein 2696644 554290002601 SSPA2425 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143271.1 2694944 R 554290 CDS YP_002143272.1 197363635 complement(2696647..2697138) 1 NC_011147.1 similar to |37527368|ref|NP_930712.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein 2697138 554290002602 SSPA2426 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143272.1 2696647 R 554290 CDS YP_002143273.1 197363636 complement(2697164..2697889) 1 NC_011147.1 similar to |37527369|ref|NP_930713.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein 2697889 554290002603 SSPA2427 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143273.1 2697164 R 554290 CDS YP_002143274.1 197363637 complement(2697879..2698406) 1 NC_011147.1 similar to |9634075|ref|NP_052268.1| unnamed protein product [Enterobacteria phage 186]; phage protein 2698406 554290002604 SSPA2428 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143274.1 2697879 R 554290 CDS YP_008144951.1 516595079 complement(2698424..2700451) 1 NC_011147.1 phage tail protein 2700451 554290002605 SSPA2428a Salmonella enterica subsp. enterica serovar Paratyphi A str. phage tail protein YP_008144951.1 2698424 R 554290 CDS YP_002143275.1 197363638 complement(2700461..2701036) 1 NC_011147.1 similar to |37527904|ref|NP_931249.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein 2701036 554290002606 SSPA2429 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143275.1 2700461 R 554290 CDS YP_002143276.1 197363639 complement(2701041..2702174) 1 NC_011147.1 similar to |46133738|ref|ZP_00157650.2| COG3299: Uncharacterized homolog of phage Mu protein gp47 [Haemophilus influenzae R2866]; phage protein 2702174 554290002607 SSPA2430 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143276.1 2701041 R 554290 CDS YP_002143277.1 197363640 complement(2702222..2702551) 1 NC_011147.1 similar to |9628634|ref|NP_043499.1| orf28 [Haemophilus phage HP1]; phage protein 2702551 554290002608 SSPA2431 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143277.1 2702222 R 554290 CDS YP_002143278.1 197363641 complement(2702548..2704518) 1 NC_011147.1 similar to |9628633|ref|NP_043498.1| orf27 [Haemophilus phage HP1]; phage protein 2704518 554290002609 SSPA2432 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143278.1 2702548 R 554290 CDS YP_002143279.1 197363642 complement(2704706..2704963) 1 NC_011147.1 similar to |31195103|ref|XP_306499.1| ENSANGP00000001476 [Anopheles gambiae]; phage protein 2704963 554290002610 SSPA2433 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143279.1 2704706 R 554290 CDS YP_002143280.1 197363643 complement(2706083..2706538) 1 NC_011147.1 similar to |9628628|ref|NP_043493.1| orf24 [Haemophilus phage HP1]; phage protein 2706538 554290002611 SSPA2434 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143280.1 2706083 R 554290 CDS YP_002143281.1 197363644 complement(2706535..2707662) 1 NC_011147.1 similar to |17981837|ref|NP_536828.1| tail sheath [Haemophilus phage HP2]; phage protein 2707662 554290002612 SSPA2435 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143281.1 2706535 R 554290 CDS YP_002143282.1 197363645 complement(2707659..2708366) 1 NC_011147.1 similar to |17981836|ref|NP_536827.1| orf22 [Haemophilus phage HP2]; phage protein 2708366 554290002613 SSPA2436 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143282.1 2707659 R 554290 CDS YP_002143283.1 197363646 complement(2708363..2708869) 1 NC_011147.1 similar to |17975131|ref|NP_536653.1| hypothetical protein K139p26 [Bacteriophage K139]; phage protein 2708869 554290002614 SSPA2437 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143283.1 2708363 R 554290 CDS YP_002143284.1 197363647 complement(2708866..2709318) 1 NC_011147.1 similar to |17975130|ref|NP_536652.1| head completion protein [Bacteriophage K139]; phage protein 2709318 554290002615 SSPA2438 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143284.1 2708866 R 554290 CDS YP_002143285.1 197363648 complement(2709415..2710074) 1 NC_011147.1 similar to |31194915|ref|XP_306405.1| ENSANGP00000022466 [Anopheles gambiae]; phage protein 2710074 554290002616 SSPA2439 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143285.1 2709415 R 554290 CDS YP_002143286.1 197363649 complement(2710120..2711091) 1 NC_011147.1 similar to |17975128|ref|NP_536650.1| major capsid protein [Bacteriophage K139]; phage protein 2711091 554290002617 SSPA2440 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143286.1 2710120 R 554290 CDS YP_002143287.1 197363650 2712165..2713940 1 NC_011147.1 'similar to |17975126|ref|NP_536648.1| terminase, ATPase subunit [Bacteriophage K139]'; phage protein 2713940 554290002618 SSPA2441 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143287.1 2712165 D 554290 CDS YP_002143288.1 197363651 2713937..2714998 1 NC_011147.1 similar to |9628619|ref|NP_043484.1| orf15 [Haemophilus phage HP1]; phage protein 2714998 554290002619 SSPA2442 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143288.1 2713937 D 554290 CDS YP_002143289.1 197363652 2715049..2715318 1 NC_011147.1 similar to |17975123|ref|NP_536645.1| zinc-finger protein [Bacteriophage K139]; phage protein 2715318 554290002620 SSPA2443 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143289.1 2715049 D 554290 CDS YP_002143290.1 197363653 complement(2715623..2717155) 1 NC_011147.1 similar to |41057388|ref|NP_958093.1| gp36 [Bacteriophage PSP3]; phage protein 2717155 554290002621 SSPA2444 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143290.1 2715623 R 554290 CDS YP_002143291.1 197363654 complement(2717685..2718497) 1 NC_011147.1 similar to |118679|sp|P21311|DMA7_ECOLI Retron EC67 DNA adenine methylase (ORF1-EC67 DAM) (M.Eco67Dam); phage protein 2718497 554290002622 SSPA2445 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143291.1 2717685 R 554290 CDS YP_002143292.1 197363655 complement(2719839..2720369) 1 NC_011147.1 similar to |141343|sp|P21316|YR7B_ECOLI HYPOTHETICAL 18.1 KD PROTEIN (ORFB) (RETRON EC67); phage protein 2720369 554290002623 SSPA2446 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage protein YP_002143292.1 2719839 R 554290 CDS YP_002143293.1 197363656 2721297..2722310 1 NC_011147.1 bacteriophage integrase 2722310 554290002624 SSPA2447 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriophage integrase YP_002143293.1 2721297 D 554290 CDS YP_002143294.1 197363657 complement(2723982..2724521) 1 NC_011147.1 similar to Salmonella typhimurium Flagellar synthesis: repressor of fliC; Flagellar synthesis: repressor of fliC 2724521 554290002625 SSPA2448 Salmonella enterica subsp. enterica serovar Paratyphi A str. Flagellar synthesis: repressor of fliC YP_002143294.1 2723982 R 554290 CDS YP_002143295.1 197363658 complement(2724589..2726109) 1 NC_011147.1 'structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes'; flagellin 2726109 554290002626 SSPA2449 Salmonella enterica subsp. enterica serovar Paratyphi A str. flagellin YP_002143295.1 2724589 R 554290 CDS YP_002143296.1 197363659 2727735..2728850 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyltransferase; glycosyltransferase 2728850 554290002628 SSPA2451 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyltransferase YP_002143296.1 2727735 D 554290 CDS YP_002143297.1 197363660 2728931..2732587 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter protein; ABC transporter 2732587 554290002629 SSPA2452 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter YP_002143297.1 2728931 D 554290 CDS YP_002143298.1 197363661 2732697..2733941 1 NC_011147.1 similar to Salmonella typhi CT18 ferric enterochelin esterase; ferric enterochelin esterase 2733941 554290002630 SSPA2453 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferric enterochelin esterase YP_002143298.1 2732697 D 554290 CDS YP_002143299.1 197363662 2733973..2734908 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2734908 554290002631 SSPA2454 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143299.1 2733973 D 554290 CDS YP_002143300.1 197363663 complement(2734950..2737124) 1 NC_011147.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 2737124 554290002632 SSPA2455 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane receptor FepA YP_002143300.1 2734950 R 554290 CDS YP_002143301.1 197363664 complement(2737655..2737987) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 2737987 554290002634 SSPA2456 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002143301.1 2737655 R 554290 CDS YP_002143302.1 197363665 complement(2738162..2739214) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2739214 554290002635 SSPA2457 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143302.1 2738162 R 554290 CDS YP_002143303.1 197363666 2739734..2740663 1 NC_011147.1 similar to Salmonella typhi CT18 virulence protein; virulence protein 2740663 554290002636 SSPA2458 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence protein YP_002143303.1 2739734 D 554290 CDS YP_002143304.1 197363667 2740957..2741853 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 2741853 554290002637 SSPA2459 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002143304.1 2740957 D 554290 CDS YP_002143305.1 197363668 complement(2742576..2743589) 1 NC_011147.1 similar to Salmonella typhimurium nickel transporter; nickel transporter 2743589 554290002638 SSPA2460 Salmonella enterica subsp. enterica serovar Paratyphi A str. nickel transporter YP_002143305.1 2742576 R 554290 CDS YP_002143306.1 197363669 complement(2743722..2745137) 1 NC_011147.1 similar to Salmonella typhi CT18 two-component system sensor kinase; two-component system sensor kinase 2745137 554290002639 SSPA2461 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component system sensor kinase YP_002143306.1 2743722 R 554290 CDS YP_002143307.1 197363670 complement(2745124..2745798) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 2745798 554290002640 SSPA2462 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002143307.1 2745124 R 554290 CDS YP_002143308.1 197363671 2745837..2745956 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2745956 554290002641 SSPA2463 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143308.1 2745837 D 554290 CDS YP_002143309.2 449784969 2745953..2746930 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2746930 554290002642 SSPA2464 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143309.2 2745953 D 554290 CDS YP_002143310.1 197363673 2746945..2747376 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2747376 554290002643 SSPA2465 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143310.1 2746945 D 554290 CDS YP_002143311.1 197363674 2747387..2748901 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2748901 554290002644 SSPA2466 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143311.1 2747387 D 554290 CDS YP_002143312.1 197363675 2749204..2750181 1 NC_011147.1 in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; hypothetical protein 2750181 554290002645 SSPA2467 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143312.1 2749204 D 554290 CDS YP_002143313.1 197363676 2750207..2751475 1 NC_011147.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 2751475 554290002646 SSPA2468 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydroxyglutarate oxidase YP_002143313.1 2750207 D 554290 CDS YP_002143314.1 197363677 2751497..2752945 1 NC_011147.1 catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; succinate-semialdehyde dehydrogenase I 2752945 gabD 554290002647 gabD Salmonella enterica subsp. enterica serovar Paratyphi A str. succinate-semialdehyde dehydrogenase I YP_002143314.1 2751497 D 554290 CDS YP_002143315.1 197363678 2752960..2754243 1 NC_011147.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2754243 554290002648 SSPA2470 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-aminobutyrate aminotransferase YP_002143315.1 2752960 D 554290 CDS YP_002143316.2 449784970 2754373..2755773 1 NC_011147.1 similar to Salmonella typhi CT18 GabA permease (4-amino butyrate transport carrier); gamma-aminobutyrate transporter 2755773 554290002649 SSPA2471 Salmonella enterica subsp. enterica serovar Paratyphi A str. gamma-aminobutyrate transporter YP_002143316.2 2754373 D 554290 CDS YP_002143317.1 197363680 2755815..2756492 1 NC_011147.1 regulator of gab gene expression; DNA-binding transcriptional regulator CsiR 2756492 554290002650 SSPA2472 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator CsiR YP_002143317.1 2755815 D 554290 CDS YP_002143318.1 197363681 complement(2756514..2756993) 1 NC_011147.1 similar to Salmonella typhimurium LysM domain; LysM domain/BON superfamily protein 2756993 554290002651 SSPA2473 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysM domain/BON superfamily protein YP_002143318.1 2756514 R 554290 CDS YP_002143319.1 197363682 complement(2757063..2757221) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2757221 554290002652 SSPA2474 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143319.1 2757063 R 554290 CDS YP_002143320.2 449784971 2757404..2757703 1 NC_011147.1 transcriptional regulator 2757703 554290002653 SSPA2475 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002143320.2 2757404 D 554290 CDS YP_002143321.1 197363684 2757713..2758240 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2758240 554290002654 SSPA2476 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143321.1 2757713 D 554290 CDS YP_002143322.1 197363685 2758373..2758498 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2758498 554290002655 SSPA2477 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143322.1 2758373 D 554290 CDS YP_002143323.1 197363686 complement(2758588..2758989) 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein StpA; DNA binding protein, nucleoid-associated 2758989 554290002656 SSPA2478 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA binding protein, nucleoid-associated YP_002143323.1 2758588 R 554290 CDS YP_002143324.1 197363687 2759687..2760136 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2760136 554290002657 SSPA2479 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143324.1 2759687 D 554290 CDS YP_002143325.1 197363688 complement(2760121..2760522) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2760522 554290002658 SSPA2480 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143325.1 2760121 R 554290 CDS YP_002143326.1 197363689 complement(2761094..2762428) 1 NC_011147.1 similar to |46317572|ref|ZP_00218150.1| COG1167: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Burkholderia cepacia R18194]; hypothetical protein 2762428 554290002659 SSPA2481 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143326.1 2761094 R 554290 CDS YP_002143327.1 197363690 2762517..2762948 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2762948 554290002660 SSPA2482 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143327.1 2762517 D 554290 CDS YP_002143328.1 197363691 2762945..2763121 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2763121 554290002661 SSPA2483 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143328.1 2762945 D 554290 CDS YP_002143329.1 197363692 2763220..2763465 1 NC_011147.1 similar to Salmonella typhi CT18 glutaredoxin; glutaredoxin-like protein 2763465 554290002662 SSPA2484 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutaredoxin-like protein YP_002143329.1 2763220 D 554290 CDS YP_002143330.1 197363693 2763462..2763872 1 NC_011147.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 2763872 nrdI 554290002663 nrdI Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleotide reductase stimulatory protein YP_002143330.1 2763462 D 554290 CDS YP_002143331.1 197363694 2763845..2765989 1 NC_011147.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2765989 554290002664 SSPA2486 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleotide-diphosphate reductase subunit alpha YP_002143331.1 2763845 D 554290 CDS YP_002143332.1 197363695 2767314..2768516 1 NC_011147.1 with ProWX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter ATP-binding subunit 2768516 554290002666 SSPA2487 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine betaine transporter ATP-binding subunit YP_002143332.1 2767314 D 554290 CDS YP_002143333.1 197363696 2768509..2769573 1 NC_011147.1 with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 2769573 554290002667 SSPA2488 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine betaine transporter membrane protein YP_002143333.1 2768509 D 554290 CDS YP_002143334.1 197363697 2769643..2770638 1 NC_011147.1 'with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine'; glycine betaine transporter periplasmic subunit 2770638 proX 554290002668 proX Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine betaine transporter periplasmic subunit YP_002143334.1 2769643 D 554290 CDS YP_002143335.1 197363698 2770803..2771987 1 NC_011147.1 similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 2771987 554290002669 SSPA2490 Salmonella enterica subsp. enterica serovar Paratyphi A str. transmembrane transport protein YP_002143335.1 2770803 D 554290 CDS YP_002143336.1 197363699 2772484..2773014 1 NC_011147.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 2773014 554290002670 SSPA2491 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional repressor MprA YP_002143336.1 2772484 D 554290 CDS YP_002143337.1 197363700 2773141..2774313 1 NC_011147.1 similar to Salmonella typhi CT18 multidrug resistance protein A; multidrug resistance protein A 2774313 554290002671 SSPA2492 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug resistance protein A YP_002143337.1 2773141 D 554290 CDS YP_002143338.1 197363701 2774330..2775868 1 NC_011147.1 similar to Salmonella typhi CT18 multidrug resistance protein B; multidrug resistance protein B 2775868 554290002672 SSPA2493 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug resistance protein B YP_002143338.1 2774330 D 554290 CDS YP_002143339.1 197363702 complement(2777633..2778148) 1 NC_011147.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 2778148 554290002674 SSPA2494 Salmonella enterica subsp. enterica serovar Paratyphi A str. S-ribosylhomocysteinase YP_002143339.1 2777633 R 554290 CDS YP_002143340.1 197363703 complement(2778298..2779854) 1 NC_011147.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 2779854 554290002676 SSPA2495 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate--cysteine ligase YP_002143340.1 2778298 R 554290 CDS YP_002143341.1 197363704 complement(2779931..2780356) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2780356 554290002677 SSPA2496 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143341.1 2779931 R 554290 CDS YP_002143342.1 197363705 complement(2780353..2780919) 1 NC_011147.1 'YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent'; fructose-1-phosphatase 2780919 554290002678 SSPA2497 Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose-1-phosphatase YP_002143342.1 2780353 R 554290 CDS YP_002143343.1 197363706 complement(2781908..2782093) 1 NC_011147.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 2782093 554290002683 SSPA2498 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbon storage regulator YP_002143343.1 2781908 R 554290 CDS YP_002143344.1 197363707 complement(2782328..2784958) 1 NC_011147.1 'Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; alanyl-tRNA synthetase 2784958 alaS 554290002684 alaS Salmonella enterica subsp. enterica serovar Paratyphi A str. alanyl-tRNA synthetase YP_002143344.1 2782328 R 554290 CDS YP_002143345.1 197363708 complement(2785194..2785694) 1 NC_011147.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 2785694 recX 554290002685 recX Salmonella enterica subsp. enterica serovar Paratyphi A str. recombination regulator RecX YP_002143345.1 2785194 R 554290 CDS YP_002143346.1 197363709 complement(2785811..2786872) 1 NC_011147.1 'catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs'; recombinase A 2786872 recA 554290002686 recA Salmonella enterica subsp. enterica serovar Paratyphi A str. recombinase A YP_002143346.1 2785811 R 554290 CDS YP_002143347.1 197363710 complement(2786957..2787454) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; competence damage-inducible protein A 2787454 554290002687 SSPA2502 Salmonella enterica subsp. enterica serovar Paratyphi A str. competence damage-inducible protein A YP_002143347.1 2786957 R 554290 CDS YP_002143348.1 197363711 complement(2787933..2789012) 1 NC_011147.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B 2789012 554290002688 SSPA2503 Salmonella enterica subsp. enterica serovar Paratyphi A str. murein hydrolase B YP_002143348.1 2787933 R 554290 CDS YP_002143349.1 197363712 2789266..2789829 1 NC_011147.1 'similar to Salmonella typhi CT18 PTS system,glucitol/sorbitol-specific IIBC component'; PTS system glucitol/sorbitol-specific transporter subunit IIBC 2789829 554290002689 SSPA2504 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system glucitol/sorbitol-specific transporter subunit IIBC YP_002143349.1 2789266 D 554290 CDS YP_002143350.1 197363713 2789826..2790797 1 NC_011147.1 'similar to Salmonella typhi CT18 PTS system,glucitol/sorbitol-specific IIBC component'; PTS system glucitol/sorbitol-specific transporter subunit IIBC 2790797 554290002690 SSPA2505 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system glucitol/sorbitol-specific transporter subunit IIBC YP_002143350.1 2789826 D 554290 CDS YP_002143351.1 197363714 2790809..2791171 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucitol/sorbitol-specific transporter subunit IIA 2791171 554290002691 SSPA2506 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system glucitol/sorbitol-specific transporter subunit IIA YP_002143351.1 2790809 D 554290 CDS YP_002143352.1 197363715 2791183..2791962 1 NC_011147.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase 2791962 554290002692 SSPA2507 Salmonella enterica subsp. enterica serovar Paratyphi A str. sorbitol-6-phosphate dehydrogenase YP_002143352.1 2791183 D 554290 CDS YP_002143353.1 197363716 2792039..2792398 1 NC_011147.1 regulator for glucitol utilization; DNA-binding transcriptional activator GutM 2792398 554290002693 SSPA2508 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator GutM YP_002143353.1 2792039 D 554290 CDS YP_002143354.1 197363717 2792596..2793369 1 NC_011147.1 regulates genes involved in glucitol utilization; DNA-binding transcriptional repressor SrlR 2793369 srlR 554290002694 srlR Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor SrlR YP_002143354.1 2792596 D 554290 CDS YP_002143355.1 197363718 2793362..2794327 1 NC_011147.1 catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate; D-arabinose 5-phosphate isomerase 2794327 gutQ 554290002695 gutQ Salmonella enterica subsp. enterica serovar Paratyphi A str. D-arabinose 5-phosphate isomerase YP_002143355.1 2793362 D 554290 CDS YP_002143356.1 197363719 complement(2794324..2795832) 1 NC_011147.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 2795832 554290002696 SSPA2511 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic nitric oxide reductase transcriptional regulator YP_002143356.1 2794324 R 554290 CDS YP_002143357.1 197363720 2796029..2797468 1 NC_011147.1 detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 2797468 554290002697 SSPA2512 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic nitric oxide reductase flavorubredoxin YP_002143357.1 2796029 D 554290 CDS YP_002143358.1 197363721 2797465..2798598 1 NC_011147.1 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 2798598 554290002698 SSPA2513 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitric oxide reductase YP_002143358.1 2797465 D 554290 CDS YP_002143359.1 197363722 complement(2798695..2800935) 1 NC_011147.1 similar to Salmonella typhi Ty2 hydrogenase maturation protein; hydrogenase maturation protein 2800935 554290002699 SSPA2514 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase maturation protein YP_002143359.1 2798695 R 554290 CDS YP_002143360.1 197363723 complement(2801081..2801626) 1 NC_011147.1 involved in electron transport from formate to hydrogen; electron transport protein HydN 2801626 554290002700 SSPA2515 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron transport protein HydN YP_002143360.1 2801081 R 554290 CDS YP_002143361.1 197363724 complement(2801827..2802636) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 2802636 554290002701 SSPA2516 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143361.1 2801827 R 554290 CDS YP_002143362.1 197363725 complement(2802663..2803100) 1 NC_011147.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease 2803100 hycI 554290002702 hycI Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 3 maturation protease YP_002143362.1 2802663 R 554290 CDS YP_002143363.1 197363726 complement(2803126..2803536) 1 NC_011147.1 similar to Salmonella typhi CT18 formate hydrogenlyase maturation protein; formate hydrogenlyase maturation protein 2803536 554290002703 SSPA2518 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase maturation protein YP_002143363.1 2803126 R 554290 CDS YP_002143364.1 197363727 complement(2803533..2804300) 1 NC_011147.1 similar to Salmonella typhi CT18 formate hydrogenlyase subunit 7; formate hydrogenlyase subunit 7 2804300 554290002704 SSPA2519 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase subunit 7 YP_002143364.1 2803533 R 554290 CDS YP_002143365.1 197363728 complement(2804300..2804842) 1 NC_011147.1 'electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate'; formate hydrogenlyase complex iron-sulfur subunit 2804842 554290002705 SSPA2520 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase complex iron-sulfur subunit YP_002143365.1 2804300 R 554290 CDS YP_002143366.1 197363729 complement(2804852..2806561) 1 NC_011147.1 similar to Salmonella typhi CT18 formate hydrogenlyase subunit 5; formate hydrogenlyase subunit 5 2806561 554290002706 SSPA2521 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase subunit 5 YP_002143366.1 2804852 R 554290 CDS YP_002143367.1 197363730 complement(2806579..2807502) 1 NC_011147.1 similar to Salmonella typhi CT18 formate hydrogenlyase subunit 4; formate hydrogenlyase subunit 4 2807502 554290002707 SSPA2522 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase subunit 4 YP_002143367.1 2806579 R 554290 CDS YP_002143368.1 197363731 complement(2807505..2809331) 1 NC_011147.1 'catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3)'; formate hydrogenlyase subunit 3 2809331 554290002708 SSPA2523 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase subunit 3 YP_002143368.1 2807505 R 554290 CDS YP_002143369.1 197363732 complement(2809331..2809939) 1 NC_011147.1 similar to Salmonella typhi CT18 formate hydrogenlyase subunit 2; formate hydrogenlyase subunit 2 2809939 554290002709 SSPA2524 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase subunit 2 YP_002143369.1 2809331 R 554290 CDS YP_002143370.1 197363733 complement(2810085..2810546) 1 NC_011147.1 regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; formate hydrogenlyase regulatory protein HycA 2810546 554290002710 SSPA2525 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate hydrogenlyase regulatory protein HycA YP_002143370.1 2810085 R 554290 CDS YP_002143371.1 197363734 2810756..2811112 1 NC_011147.1 plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 2811112 hypA 554290002711 hypA Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase nickel incorporation protein YP_002143371.1 2810756 D 554290 CDS YP_002143372.1 197363735 2811182..2812054 1 NC_011147.1 GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB 2812054 554290002712 SSPA2527 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase nickel incorporation protein HypB YP_002143372.1 2811182 D 554290 CDS YP_002143373.1 197363736 2812045..2812317 1 NC_011147.1 'HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase'; hydrogenase assembly chaperone 2812317 554290002713 SSPA2528 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase assembly chaperone YP_002143373.1 2812045 D 554290 CDS YP_002143374.1 197363737 2812317..2813438 1 NC_011147.1 similar to Salmonella typhi CT18 hydrogenase isoenzymes formation protein HypD; hydrogenase expression/formation protein HypD 2813438 554290002714 SSPA2529 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase expression/formation protein HypD YP_002143374.1 2812317 D 554290 CDS YP_002143375.1 197363738 2813477..2814445 1 NC_011147.1 similar to Salmonella typhi CT18 hydrogenase isoenzymes formation protein HypE; hydrogenase isoenzymes formation protein HypE 2814445 554290002715 SSPA2530 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase isoenzymes formation protein HypE YP_002143375.1 2813477 D 554290 CDS YP_002143376.1 197363739 2814664..2816742 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional activator of the formate hydrogenlyase system; transcriptional activator of the formate hydrogenlyase system 2816742 554290002716 SSPA2531 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator of the formate hydrogenlyase system YP_002143376.1 2814664 D 554290 CDS YP_002143377.1 197363740 complement(2816804..2817148) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2817148 554290002717 SSPA2532 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143377.1 2816804 R 554290 CDS YP_002143378.1 197363741 2817330..2818247 1 NC_011147.1 'similar to Salmonella typhi CT18 Iron transport protein, periplasmic-binding protein'; Iron transporter periplasmic-binding protein 2818247 554290002718 SSPA2533 Salmonella enterica subsp. enterica serovar Paratyphi A str. Iron transporter periplasmic-binding protein YP_002143378.1 2817330 D 554290 CDS YP_002143379.1 197363742 2818244..2819065 1 NC_011147.1 'similar to Salmonella typhi CT18 Iron transport protein, ATP-binding component'; Iron transporter ATP-binding protein 2819065 554290002719 SSPA2534 Salmonella enterica subsp. enterica serovar Paratyphi A str. Iron transporter ATP-binding protein YP_002143379.1 2818244 D 554290 CDS YP_002143380.1 197363743 2819062..2819922 1 NC_011147.1 'similar to Salmonella typhi CT18 Iron transport protein, inner membrane component'; Iron transporter inner membrane protein 2819922 554290002720 SSPA2535 Salmonella enterica subsp. enterica serovar Paratyphi A str. Iron transporter inner membrane protein YP_002143380.1 2819062 D 554290 CDS YP_002143381.1 197363744 2819913..2820761 1 NC_011147.1 'similar to Salmonella typhi CT18 Iron transport protein, inner membrane component'; Iron transporter inner membrane protein 2820761 554290002721 SSPA2536 Salmonella enterica subsp. enterica serovar Paratyphi A str. Iron transporter inner membrane protein YP_002143381.1 2819913 D 554290 CDS YP_002143382.1 197363745 2820733..2820942 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2820942 554290002722 SSPA2537 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143382.1 2820733 D 554290 CDS YP_002143383.1 197363746 complement(2821038..2821793) 1 NC_011147.1 similar to Salmonella typhi CT18 possible AraC-family transcriptional regulator; AraC family transcriptional regulator 2821793 554290002723 SSPA2538 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC family transcriptional regulator YP_002143383.1 2821038 R 554290 CDS YP_002143384.1 197363747 complement(2822178..2823065) 1 NC_011147.1 similar to Salmonella typhi Ty2 possible AraC-family transcriptional regulator; AraC family transcriptional regulator 2823065 554290002724 SSPA2539 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC family transcriptional regulator YP_002143384.1 2822178 R 554290 CDS YP_002143385.1 197363748 complement(2823411..2823863) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein found within S. typhi pathogenicity island 1; hypothetical protein 2823863 554290002725 SSPA2540 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143385.1 2823411 R 554290 CDS YP_002143386.1 197363749 complement(2823879..2824550) 1 NC_011147.1 similar to Salmonella typhi Ty2 oxygen-regulated invasion protein; oxygen-regulated invasion protein 2824550 554290002726 SSPA2541 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxygen-regulated invasion protein YP_002143386.1 2823879 R 554290 CDS YP_002143387.1 197363750 complement(2824507..2825085) 1 NC_011147.1 similar to Salmonella typhi Ty2 oxygen-regulated invasion protein; oxygen-regulated invasion protein 2825085 554290002727 SSPA2542 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxygen-regulated invasion protein YP_002143387.1 2824507 R 554290 CDS YP_002143388.1 197363751 complement(2825078..2825836) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein 2825836 554290002728 SSPA2543 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143388.1 2825078 R 554290 CDS YP_002143389.1 197363752 complement(2825833..2826138) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein 2826138 554290002729 SSPA2544 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143389.1 2825833 R 554290 CDS YP_002143390.1 197363753 complement(2826157..2826399) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein 2826399 554290002730 SSPA2545 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143390.1 2826157 R 554290 CDS YP_002143391.1 197363754 complement(2826424..2827602) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein 2827602 554290002731 SSPA2546 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143391.1 2826424 R 554290 CDS YP_002143392.1 197363755 2827918..2828847 1 NC_011147.1 similar to Salmonella typhi CT18 AraC-family transcriptional regulator; araC family transcriptional regulator 2828847 554290002732 SSPA2547 Salmonella enterica subsp. enterica serovar Paratyphi A str. araC family transcriptional regulator YP_002143392.1 2827918 D 554290 CDS YP_002143393.1 197363756 2829938..2831599 1 NC_011147.1 Activates the expression of invasion genes and activates the expression of prgHIJK which is part of the pathogenicity island 1 type III secretion system; invasion protein regulator 2831599 554290002733 SSPA2548 Salmonella enterica subsp. enterica serovar Paratyphi A str. invasion protein regulator YP_002143393.1 2829938 D 554290 CDS YP_002143394.1 197363757 2831617..2832099 1 NC_011147.1 similar to Salmonella typhi CT18 cell invasion protein; cell invasion protein 2832099 554290002734 SSPA2549 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell invasion protein YP_002143394.1 2831617 D 554290 CDS YP_002143395.1 197363758 complement(2832153..2833784) 1 NC_011147.1 stpA-like protein 2833784 554290002735 SSPA2550 Salmonella enterica subsp. enterica serovar Paratyphi A str. stpA-like protein YP_002143395.1 2832153 R 554290 CDS YP_002143396.1 197363759 complement(2833771..2834121) 1 NC_011147.1 similar to Salmonella typhi CT18 chaperone (associated with virulence); chaperone 2834121 554290002736 SSPA2551 Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone YP_002143396.1 2833771 R 554290 CDS YP_002143397.1 197363760 complement(2834190..2834450) 1 NC_011147.1 similar to Salmonella typhi CT18 doubtful CDS found within S. typhi pathogenicity island; hypothetical protein 2834450 554290002737 SSPA2552 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143397.1 2834190 R 554290 CDS YP_002143398.1 197363761 complement(2834494..2834742) 1 NC_011147.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2834742 554290002738 SSPA2553 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyl carrier protein YP_002143398.1 2834494 R 554290 CDS YP_002143399.1 197363762 complement(2834761..2836818) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island 1 effector protein (function unknown); pathogenicity island 1 effector protein 2836818 554290002739 SSPA2554 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143399.1 2834761 R 554290 CDS YP_002143400.1 197363763 complement(2836837..2837859) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island 1 effector protein; pathogenicity island 1 effector protein 2837859 554290002740 SSPA2555 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143400.1 2836837 R 554290 CDS YP_002143401.1 197363764 complement(2837929..2839158) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island 1 effector protein; pathogenicity island 1 effector protein 2839158 554290002741 SSPA2556 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143401.1 2837929 R 554290 CDS YP_002143402.1 197363765 complement(2839186..2840967) 1 NC_011147.1 similar to Salmonella typhi CT18 pathogenicity island 1 effector protein; pathogenicity island 1 effector protein 2840967 554290002742 SSPA2557 Salmonella enterica subsp. enterica serovar Paratyphi A str. pathogenicity island 1 effector protein YP_002143402.1 2839186 R 554290 CDS YP_002143403.1 197363766 complement(2840970..2841467) 1 NC_011147.1 similar to Salmonella typhi Ty2 unknown function; hypothetical protein 2841467 554290002743 SSPA2558 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143403.1 2840970 R 554290 CDS YP_002143404.1 197363767 complement(2841605..2842675) 1 NC_011147.1 Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins; surface presentation of antigens protein SpaS 2842675 554290002744 SSPA2559 Salmonella enterica subsp. enterica serovar Paratyphi A str. surface presentation of antigens protein SpaS YP_002143404.1 2841605 R 554290 CDS YP_002143405.1 197363768 complement(2842662..2843453) 1 NC_011147.1 similar to Salmonella typhi CT18 secretory protein (associated with virulence); virulence secretory protein 2843453 554290002745 SSPA2560 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence secretory protein YP_002143405.1 2842662 R 554290 CDS YP_002143406.1 197363769 complement(2843457..2843717) 1 NC_011147.1 similar to Salmonella typhi CT18 secretory protein (associated with virulence); virulence secretory protein 2843717 554290002746 SSPA2561 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence secretory protein YP_002143406.1 2843457 R 554290 CDS YP_002143407.1 197363770 complement(2843743..2844417) 1 NC_011147.1 part of a type III secretory system probably involved in invasion into eukaryotic cells; surface presentation of antigens protein SpaP 2844417 spaP 554290002747 spaP Salmonella enterica subsp. enterica serovar Paratyphi A str. surface presentation of antigens protein SpaP YP_002143407.1 2843743 R 554290 CDS YP_002143408.1 197363771 complement(2844407..2845318) 1 NC_011147.1 involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; surface presentation of antigens protein SpaO 2845318 554290002748 SSPA2563 Salmonella enterica subsp. enterica serovar Paratyphi A str. surface presentation of antigens protein SpaO YP_002143408.1 2844407 R 554290 CDS YP_002143409.1 197363772 complement(2845318..2846328) 1 NC_011147.1 similar to Salmonella typhi Ty2 antigen presentation protein SpaN; antigen presentation protein SpaN 2846328 554290002749 SSPA2564 Salmonella enterica subsp. enterica serovar Paratyphi A str. antigen presentation protein SpaN YP_002143409.1 2845318 R 554290 CDS YP_002143410.1 197363773 complement(2846328..2846771) 1 NC_011147.1 similar to Salmonella typhi Ty2 virulence-associated secretory protein; virulence-associated secretory protein 2846771 554290002750 SSPA2565 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence-associated secretory protein YP_002143410.1 2846328 R 554290 CDS YP_002143411.1 197363774 complement(2846749..2848044) 1 NC_011147.1 Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase; ATP synthase SpaL 2848044 554290002751 SSPA2566 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP synthase SpaL YP_002143411.1 2846749 R 554290 CDS YP_002143412.1 197363775 complement(2848041..2848448) 1 NC_011147.1 similar to Salmonella typhi Ty2 virulence-associated secretory protein; virulence-associated secretory protein 2848448 554290002752 SSPA2567 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence-associated secretory protein YP_002143412.1 2848041 R 554290 CDS YP_002143413.1 197363776 complement(2848472..2850529) 1 NC_011147.1 similar to Salmonella typhi CT18 possible secretory protein (associated with virulence); hypothetical protein 2850529 554290002753 SSPA2568 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143413.1 2848472 R 554290 CDS YP_002143414.1 197363777 complement(2850554..2851672) 1 NC_011147.1 similar to Salmonella typhi CT18 cell invasion protein; cell invasion protein 2851672 554290002754 SSPA2569 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell invasion protein YP_002143414.1 2850554 R 554290 CDS YP_002143415.1 197363778 complement(2851669..2853357) 1 NC_011147.1 similar to Salmonella typhi CT18 secretory protein (associated with virulence); virulence secretory protein 2853357 554290002755 SSPA2570 Salmonella enterica subsp. enterica serovar Paratyphi A str. virulence secretory protein YP_002143415.1 2851669 R 554290 CDS YP_002143416.2 449784972 complement(2853354..2854103) 1 NC_011147.1 similar to Salmonella typhi CT18 possible AraC-family regulatory protein; AraC-family regulatory protein 2854103 554290002756 SSPA2571 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC-family regulatory protein YP_002143416.2 2853354 R 554290 CDS YP_002143417.1 197363780 2854460..2854903 1 NC_011147.1 similar to Salmonella typhi CT18 cell adherance/invasion protein; cell adherance/invasion protein 2854903 554290002757 SSPA2572 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell adherance/invasion protein YP_002143417.1 2854460 D 554290 CDS YP_002143418.1 197363781 2855298..2855516 1 NC_011147.1 similar to |38639584|ref|NP_943353.1| hypothetical protein LV097 [Klebsiella pneumoniae]; hypothetical protein 2855516 554290002758 SSPA2573 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143418.1 2855298 D 554290 CDS YP_002143419.1 197363782 2855786..2856067 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2856067 554290002759 SSPA2574 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143419.1 2855786 D 554290 CDS YP_002143420.1 197363783 2856067..2856591 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2856591 554290002760 SSPA2575 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143420.1 2856067 D 554290 CDS YP_002143421.1 197363784 complement(2858144..2858329) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2858329 554290002763 SSPA2576 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143421.1 2858144 R 554290 CDS YP_002143422.1 197363785 complement(2858338..2858664) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2858664 554290002764 SSPA2577 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143422.1 2858338 R 554290 CDS YP_002143423.1 197363786 2858865..2861390 1 NC_011147.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2861390 554290002765 SSPA2578 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA mismatch repair protein MutS YP_002143423.1 2858865 D 554290 CDS YP_002143424.2 449784973 complement(2861446..2861826) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2861826 554290002766 SSPA2579 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143424.2 2861446 R 554290 CDS YP_002143425.1 197363788 complement(2861823..2863031) 1 NC_011147.1 similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein 2863031 554290002767 SSPA2580 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002143425.1 2861823 R 554290 CDS YP_002143426.1 197363789 2863140..2864051 1 NC_011147.1 similar to Salmonella typhi CT18 possible LysR-family transcriptional regulator; LysR family transcriptional regulator 2864051 554290002768 SSPA2581 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002143426.1 2863140 D 554290 CDS YP_002143427.1 197363790 complement(2864093..2865589) 1 NC_011147.1 similar to Salmonella typhi CT18 possible permease; permease 2865589 554290002769 SSPA2582 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease YP_002143427.1 2864093 R 554290 CDS YP_002143428.1 197363791 complement(2865586..2866536) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2866536 554290002770 SSPA2583 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143428.1 2865586 R 554290 CDS YP_002143429.1 197363792 complement(2866576..2867301) 1 NC_011147.1 hypothetical protein 2867301 554290002771 SSPA2584 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143429.1 2866576 R 554290 CDS YP_002143430.1 197363793 complement(2867306..2867944) 1 NC_011147.1 similar to Salmonella typhi CT18 possible sugar aldolase; aldolase 2867944 554290002772 SSPA2585 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldolase YP_002143430.1 2867306 R 554290 CDS YP_002143431.1 197363794 complement(2867941..2869203) 1 NC_011147.1 similar to |32470068|ref|NP_863010.1| protein [Escherichia coli]; hypothetical protein 2869203 554290002773 SSPA2586 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143431.1 2867941 R 554290 CDS YP_002143432.1 197363795 complement(2869197..2870120) 1 NC_011147.1 similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase 2870120 554290002774 SSPA2587 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-hydroxyisobutyrate dehydrogenase YP_002143432.1 2869197 R 554290 CDS YP_002143433.1 197363796 2870317..2871081 1 NC_011147.1 similar to Salmonella typhi CT18 DeoR-family trancriptional regulator; DeoR-family transcriptional regulator 2871081 554290002775 SSPA2588 Salmonella enterica subsp. enterica serovar Paratyphi A str. DeoR-family transcriptional regulator YP_002143433.1 2870317 D 554290 CDS YP_002143434.1 197363797 complement(2871100..2871504) 1 NC_011147.1 slyA-like protein 2871504 554290002776 SSPA2589 Salmonella enterica subsp. enterica serovar Paratyphi A str. slyA-like protein YP_002143434.1 2871100 R 554290 CDS YP_002143435.1 197363798 2871675..2873696 1 NC_011147.1 hypothetical protein 2873696 554290002777 SSPA2590 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143435.1 2871675 D 554290 CDS YP_002143436.1 197363799 2873707..2873943 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2873943 554290002778 SSPA2591 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143436.1 2873707 D 554290 CDS YP_002143437.1 197363800 complement(2873988..2874980) 1 NC_011147.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 2874980 554290002779 SSPA2592 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA polymerase sigma factor RpoS YP_002143437.1 2873988 R 554290 CDS YP_002143438.1 197363801 complement(2875043..2876176) 1 NC_011147.1 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD 2876176 nlpD 554290002780 nlpD Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein NlpD YP_002143438.1 2875043 R 554290 CDS YP_002143439.1 197363802 complement(2876352..2876978) 1 NC_011147.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 2876978 pcm 554290002781 pcm Salmonella enterica subsp. enterica serovar Paratyphi A str. protein-L-isoaspartate O-methyltransferase YP_002143439.1 2876352 R 554290 CDS YP_002143440.1 197363803 complement(2876972..2877733) 1 NC_011147.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 2877733 surE 554290002782 surE Salmonella enterica subsp. enterica serovar Paratyphi A str. stationary phase survival protein SurE YP_002143440.1 2876972 R 554290 CDS YP_002143441.1 197363804 complement(2877714..2878763) 1 NC_011147.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 2878763 truD 554290002783 truD Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA pseudouridine synthase D YP_002143441.1 2877714 R 554290 CDS YP_002143442.1 197363805 complement(2878760..2879239) 1 NC_011147.1 'catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate'; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2879239 ispF 554290002784 ispF Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_002143442.1 2878760 R 554290 CDS YP_002143443.1 197363806 complement(2879239..2879949) 1 NC_011147.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2879949 ispD 554290002785 ispD Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002143443.1 2879239 R 554290 CDS YP_002143444.1 197363807 complement(2879968..2880279) 1 NC_011147.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 2880279 ftsB 554290002786 ftsB Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsB YP_002143444.1 2879968 R 554290 CDS YP_002143445.1 197363808 complement(2880470..2880793) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2880793 554290002787 SSPA2600 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143445.1 2880470 R 554290 CDS YP_002143446.1 197363809 complement(2880844..2881449) 1 NC_011147.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 2881449 554290002788 SSPA2601 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenylylsulfate kinase YP_002143446.1 2880844 R 554290 CDS YP_002143447.1 197363810 complement(2881436..2882875) 1 NC_011147.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 2882875 cysN 554290002789 cysN Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate adenylyltransferase subunit 1 YP_002143447.1 2881436 R 554290 CDS YP_002143448.1 197363811 complement(2882885..2883793) 1 NC_011147.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2883793 554290002790 SSPA2603 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate adenylyltransferase subunit 2 YP_002143448.1 2882885 R 554290 CDS YP_002143449.1 197363812 complement(2885645..2885938) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2885938 554290002792 SSPA2604 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143449.1 2885645 R 554290 CDS YP_002143450.1 197363813 complement(2885968..2886858) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2886858 554290002793 SSPA2605 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143450.1 2885968 R 554290 CDS YP_002143451.1 197363814 complement(2886858..2887562) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2887562 554290002794 SSPA2606 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143451.1 2886858 R 554290 CDS YP_002143452.1 197363815 complement(2887562..2888287) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2888287 554290002795 SSPA2607 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143452.1 2887562 R 554290 CDS YP_002143453.1 197363816 complement(2888297..2889355) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2889355 554290002796 SSPA2608 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143453.1 2888297 R 554290 CDS YP_002143454.1 197363817 complement(2889378..2889980) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2889980 554290002797 SSPA2609 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143454.1 2889378 R 554290 CDS YP_008144952.1 516595080 2891890..2894589 1 NC_011147.1 helicase 2894589 554290002799 SSPA2609b Salmonella enterica subsp. enterica serovar Paratyphi A str. helicase YP_008144952.1 2891890 D 554290 CDS YP_002143455.1 197363818 2894969..2895922 1 NC_011147.1 similar to Salmonella typhi CT18 possible secreted protein; hypothetical protein 2895922 554290002800 SSPA2610 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143455.1 2894969 D 554290 CDS YP_002143456.1 197363819 complement(2896010..2896744) 1 NC_011147.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 2896744 554290002801 SSPA2611 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoadenosine phosphosulfate reductase YP_002143456.1 2896010 R 554290 CDS YP_002143457.1 197363820 complement(2896820..2898532) 1 NC_011147.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 2898532 554290002802 SSPA2612 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfite reductase subunit beta YP_002143457.1 2896820 R 554290 CDS YP_002143458.2 449784974 complement(2898532..2900331) 1 NC_011147.1 similar to Salmonella typhi CT18 sulfite reductase (NADPH) flavoprotein beta subunit; sulfite reductase (NADPH) flavoprotein subunit beta 2900331 554290002803 SSPA2613 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfite reductase (NADPH) flavoprotein subunit beta YP_002143458.2 2898532 R 554290 CDS YP_002143459.1 197363822 2900767..2901129 1 NC_011147.1 similar to Salmonella typhi CT18 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 2901129 554290002804 SSPA2614 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-pyruvoyl tetrahydrobiopterin synthase YP_002143459.1 2900767 D 554290 CDS YP_002143460.1 197363823 complement(2902619..2903290) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2903290 554290002806 SSPA2615 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143460.1 2902619 R 554290 CDS YP_002143461.1 197363824 complement(2903426..2904724) 1 NC_011147.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2904724 eno 554290002808 eno Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphopyruvate hydratase YP_002143461.1 2903426 R 554290 CDS YP_002143462.1 197363825 complement(2904807..2906444) 1 NC_011147.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2906444 pyrG 554290002809 pyrG Salmonella enterica subsp. enterica serovar Paratyphi A str. CTP synthetase YP_002143462.1 2904807 R 554290 CDS YP_002143463.1 197363826 complement(2906672..2907472) 1 NC_011147.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 2907472 mazG 554290002810 mazG Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside triphosphate pyrophosphohydrolase YP_002143463.1 2906672 R 554290 CDS YP_002143464.1 197363827 2908081..2908668 1 NC_011147.1 similar to Salmonella typhimurium fimbrial subunit; fimbrial subunit 2908668 554290002811 SSPA2619 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002143464.1 2908081 D 554290 CDS YP_002143465.1 197363828 2908802..2911447 1 NC_011147.1 similar to Salmonella typhi Ty2 outer membrane usher protein; outer membrane usher protein 2911447 554290002812 SSPA2620 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane usher protein YP_002143465.1 2908802 D 554290 CDS YP_002143466.1 197363829 2911460..2912233 1 NC_011147.1 similar to Salmonella typhi Ty2 periplasmic fimbrial chaperone; periplasmic fimbrial chaperone 2912233 554290002813 SSPA2621 Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic fimbrial chaperone YP_002143466.1 2911460 D 554290 CDS YP_002143467.1 197363830 2912259..2912759 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2912759 554290002814 SSPA2622 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002143467.1 2912259 D 554290 CDS YP_002143468.1 197363831 2912774..2913244 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2913244 554290002815 SSPA2623 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002143468.1 2912774 D 554290 CDS YP_002143469.1 197363832 2913241..2913777 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2913777 554290002816 SSPA2624 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002143469.1 2913241 D 554290 CDS YP_002143470.1 197363833 2913836..2914954 1 NC_011147.1 similar to Salmonella typhi CT18 possible secreted protein; hypothetical protein 2914954 554290002817 SSPA2625 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143470.1 2913836 D 554290 CDS YP_002143471.1 197363834 2915561..2916391 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2916391 554290002818 SSPA2626 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143471.1 2915561 D 554290 CDS YP_002143472.1 197363835 complement(2917100..2917387) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2917387 554290002819 SSPA2627 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143472.1 2917100 R 554290 CDS YP_002143473.1 197363836 complement(2917540..2919774) 1 NC_011147.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 2919774 relA 554290002820 relA Salmonella enterica subsp. enterica serovar Paratyphi A str. GDP/GTP pyrophosphokinase YP_002143473.1 2917540 R 554290 CDS YP_002143474.1 197363837 complement(2919826..2921121) 1 NC_011147.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 2921121 rumA 554290002821 rumA Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA 5-methyluridine methyltransferase YP_002143474.1 2919826 R 554290 CDS YP_002143475.1 197363838 2921179..2923935 1 NC_011147.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 2923935 554290002822 SSPA2630 Salmonella enterica subsp. enterica serovar Paratyphi A str. hybrid sensory histidine kinase BarA YP_002143475.1 2921179 D 554290 CDS YP_002143476.1 197363839 complement(2923979..2925121) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2925121 554290002823 SSPA2631 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143476.1 2923979 R 554290 CDS YP_002143477.1 197363840 complement(2925199..2926536) 1 NC_011147.1 similar to Salmonella typhi Ty2 probable glucarate dehydratase 1; glucarate dehydratase 2926536 554290002824 SSPA2632 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucarate dehydratase YP_002143477.1 2925199 R 554290 CDS YP_002143478.1 197363841 complement(2928371..2928820) 1 NC_011147.1 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group'; flavodoxin 2928820 554290002826 SSPA2633 Salmonella enterica subsp. enterica serovar Paratyphi A str. flavodoxin YP_002143478.1 2928371 R 554290 CDS YP_002143479.1 197363842 complement(2928839..2929621) 1 NC_011147.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 2929621 554290002827 SSPA2634 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA pseudouridine synthase C YP_002143479.1 2928839 R 554290 CDS YP_002143480.1 197363843 complement(2929621..2929950) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2929950 554290002828 SSPA2635 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143480.1 2929621 R 554290 CDS YP_002143481.1 197363844 complement(2930562..2931107) 1 NC_011147.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 2931107 554290002830 SSPA2636 Salmonella enterica subsp. enterica serovar Paratyphi A str. SecY interacting protein Syd YP_002143481.1 2930562 R 554290 CDS YP_002143482.1 197363845 2931176..2932024 1 NC_011147.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2932024 queF 554290002831 queF Salmonella enterica subsp. enterica serovar Paratyphi A str. 7-cyano-7-deazaguanine reductase YP_002143482.1 2931176 D 554290 CDS YP_002143483.1 197363846 2932167..2933501 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2933501 554290002832 SSPA2638 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143483.1 2932167 D 554290 CDS YP_002143484.1 197363847 2934066..2935355 1 NC_011147.1 similar to Salmonella typhi CT18 serine transporter; serine transporter 2935355 554290002833 SSPA2639 Salmonella enterica subsp. enterica serovar Paratyphi A str. serine transporter YP_002143484.1 2934066 D 554290 CDS YP_002143485.1 197363848 2935414..2936781 1 NC_011147.1 similar to Salmonella typhi CT18 L-serine dehydratase 2 (L-serine deaminase 2); L-serine dehydratase 2 2936781 554290002834 SSPA2640 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-serine dehydratase 2 YP_002143485.1 2935414 D 554290 CDS YP_002143486.2 449784975 2936892..2937707 1 NC_011147.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 2937707 xni 554290002835 xni Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease IX YP_002143486.2 2936892 D 554290 CDS YP_002143487.1 197363850 complement(2937799..2938947) 1 NC_011147.1 'similar to Salmonella typhi CT18 1,2-propanediol oxidoreductase (lactaldehyde reductase)'; L-1,2-propanediol oxidoreductase 2938947 554290002836 SSPA2643 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-1,2-propanediol oxidoreductase YP_002143487.1 2937799 R 554290 CDS YP_002143488.1 197363851 complement(2938964..2939611) 1 NC_011147.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase 2939611 554290002837 SSPA2644 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-fuculose phosphate aldolase YP_002143488.1 2938964 R 554290 CDS YP_002143489.1 197363852 2940167..2941477 1 NC_011147.1 similar to Salmonella typhi Ty2 L-fucose permease; L-fucose transporter 2941477 554290002838 SSPA2645 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-fucose transporter YP_002143489.1 2940167 D 554290 CDS YP_002143490.1 197363853 2941509..2943284 1 NC_011147.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; L-fucose isomerase 2943284 fucI 554290002839 fucI Salmonella enterica subsp. enterica serovar Paratyphi A str. L-fucose isomerase YP_002143490.1 2941509 D 554290 CDS YP_002143491.1 197363854 2943385..2944803 1 NC_011147.1 similar to Salmonella typhi CT18 L-fuculose kinase; L-fuculokinase 2944803 554290002840 SSPA2647 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-fuculokinase YP_002143491.1 2943385 D 554290 CDS YP_002143492.1 197363855 2944805..2945227 1 NC_011147.1 similar to Salmonella typhi CT18 fuscose operon fucU protein; fuscose operon fucU protein 2945227 554290002841 SSPA2648 Salmonella enterica subsp. enterica serovar Paratyphi A str. fuscose operon fucU protein YP_002143492.1 2944805 D 554290 CDS YP_002143493.1 197363856 2945285..2945995 1 NC_011147.1 regulates expression of genes involved in L-fucose utilization; DNA-binding transcriptional activator FucR 2945995 554290002842 SSPA2649 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator FucR YP_002143493.1 2945285 D 554290 CDS YP_002143494.1 197363857 complement(2946054..2947154) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; RNA 2'-O-ribose methyltransferase 2947154 554290002843 SSPA2650 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA 2'-O-ribose methyltransferase YP_002143494.1 2946054 R 554290 CDS YP_002143495.1 197363858 complement(2947147..2947542) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2947542 554290002844 SSPA2651 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143495.1 2947147 R 554290 CDS YP_002143496.1 197363859 complement(2947561..2948478) 1 NC_011147.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 2948478 554290002845 SSPA2652 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator GcvA YP_002143496.1 2947561 R 554290 CDS YP_002143497.1 197363860 complement(2948825..2949052) 1 NC_011147.1 similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein 2949052 554290002847 SSPA2653 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143497.1 2948825 R 554290 CDS YP_002143498.1 197363861 2949245..2950450 1 NC_011147.1 similar to Salmonella typhi CT18 possible aminotransferase; cysteine sulfinate desulfinase 2950450 554290002848 SSPA2654 Salmonella enterica subsp. enterica serovar Paratyphi A str. cysteine sulfinate desulfinase YP_002143498.1 2949245 D 554290 CDS YP_002143499.1 197363862 2950450..2950893 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2950893 554290002849 SSPA2655 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143499.1 2950450 D 554290 CDS YP_002143500.1 197363863 2951166..2952080 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2952080 554290002850 SSPA2656 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143500.1 2951166 D 554290 CDS YP_002143501.1 197363864 complement(2952132..2952938) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2952938 554290002851 SSPA2657 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143501.1 2952132 R 554290 CDS YP_002143502.1 197363865 complement(2953048..2954145) 1 NC_011147.1 'membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues'; murein transglycosylase A 2954145 mltA 554290002852 mltA Salmonella enterica subsp. enterica serovar Paratyphi A str. murein transglycosylase A YP_002143502.1 2953048 R 554290 CDS YP_002143503.1 197363866 complement(2954648..2955901) 1 NC_011147.1 similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 2955901 554290002855 SSPA2659 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmuramoyl-L-alanine amidase YP_002143503.1 2954648 R 554290 CDS YP_002143504.1 197363867 2956134..2957465 1 NC_011147.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2957465 554290002856 SSPA2660 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylglutamate synthase YP_002143504.1 2956134 D 554290 CDS YP_002143505.1 197363868 complement(2957567..2959402) 1 NC_011147.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha 2959402 recD 554290002857 recD Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease V subunit alpha YP_002143505.1 2957567 R 554290 CDS YP_002143506.1 197363869 complement(2959399..2962944) 1 NC_011147.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta 2962944 recB 554290002858 recB Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease V subunit beta YP_002143506.1 2959399 R 554290 CDS YP_002143507.1 197363870 complement(2962937..2965825) 1 NC_011147.1 similar to Salmonella typhi CT18 protease III precursor (pitrilysin); protease III 2965825 554290002859 SSPA2663 Salmonella enterica subsp. enterica serovar Paratyphi A str. protease III YP_002143507.1 2962937 R 554290 CDS YP_002143508.1 197363871 complement(2966003..2969374) 1 NC_011147.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma 2969374 recC 554290002860 recC Salmonella enterica subsp. enterica serovar Paratyphi A str. exonuclease V subunit gamma YP_002143508.1 2966003 R 554290 CDS YP_002143509.1 197363872 complement(2969390..2969710) 1 NC_011147.1 similar to Salmonella typhi CT18 prepilin peptidase dependent protein C precursor; hypothetical protein 2969710 554290002861 SSPA2665 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143509.1 2969390 R 554290 CDS YP_002143510.1 197363873 complement(2969695..2970102) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2970102 554290002862 SSPA2666 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143510.1 2969695 R 554290 CDS YP_002143511.1 197363874 complement(2970099..2970662) 1 NC_011147.1 similar to Salmonella typhi CT18 prepilin peptidase dependent protein B precursor; hypothetical protein 2970662 554290002863 SSPA2667 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143511.1 2970099 R 554290 CDS YP_002143512.1 197363875 complement(2970653..2971123) 1 NC_011147.1 similar to Salmonella typhi CT18 prepilin peptidase dependent protein A precursor; hypothetical protein 2971123 554290002864 SSPA2668 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143512.1 2970653 R 554290 CDS YP_002143513.1 197363876 complement(2971308..2972102) 1 NC_011147.1 'ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived'; thymidylate synthase 2972102 thyA 554290002865 thyA Salmonella enterica subsp. enterica serovar Paratyphi A str. thymidylate synthase YP_002143513.1 2971308 R 554290 CDS YP_002143514.1 197363877 complement(2972109..2972984) 1 NC_011147.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2972984 554290002866 SSPA2670 Salmonella enterica subsp. enterica serovar Paratyphi A str. prolipoprotein diacylglyceryl transferase YP_002143514.1 2972109 R 554290 CDS YP_002143515.1 197363878 2973265..2973447 1 NC_011147.1 hypothetical protein 2973447 554290002867 SSPA2671 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143515.1 2973265 D 554290 CDS YP_002143516.1 197363879 complement(2973401..2975647) 1 NC_011147.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein 2975647 554290002868 SSPA2673 Salmonella enterica subsp. enterica serovar Paratyphi A str. fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein YP_002143516.1 2973401 R 554290 CDS YP_002143517.1 197363880 complement(2975660..2976190) 1 NC_011147.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 2976190 554290002869 SSPA2674 Salmonella enterica subsp. enterica serovar Paratyphi A str. dinucleoside polyphosphate hydrolase YP_002143517.1 2975660 R 554290 CDS YP_002143518.1 197363881 2976873..2977568 1 NC_011147.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 2977568 554290002870 SSPA2675 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA mismatch repair protein YP_002143518.1 2976873 D 554290 CDS YP_002143519.1 197363882 2977750..2978463 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2978463 554290002871 SSPA2676 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143519.1 2977750 D 554290 CDS YP_002143520.1 197363883 2978633..2978851 1 NC_011147.1 similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein 2978851 554290002872 SSPA2677 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143520.1 2978633 D 554290 CDS YP_002143521.1 197363884 2979042..2980082 1 NC_011147.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo-keto reductase 2980082 tas 554290002873 tas Salmonella enterica subsp. enterica serovar Paratyphi A str. aldo-keto reductase YP_002143521.1 2979042 D 554290 CDS YP_002143522.1 197363885 complement(2980169..2981371) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; lysophospholipid transporter LplT 2981371 554290002874 SSPA2679 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysophospholipid transporter LplT YP_002143522.1 2980169 R 554290 CDS YP_002143523.1 197363886 complement(2981364..2983523) 1 NC_011147.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 2983523 554290002875 SSPA2680 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_002143523.1 2981364 R 554290 CDS YP_002143524.1 197363887 2983916..2984944 1 NC_011147.1 controls transcription of galETKM; DNA-binding transcriptional regulator GalR 2984944 554290002878 SSPA2681 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator GalR YP_002143524.1 2983916 D 554290 CDS YP_002143525.1 197363888 2984958..2985977 1 NC_011147.1 similar to Salmonella typhi CT18 possible regulatory protein; regulatory protein 2985977 554290002879 SSPA2682 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002143525.1 2984958 D 554290 CDS YP_002143526.1 197363889 complement(2985987..2987249) 1 NC_011147.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 2987249 554290002880 SSPA2683 Salmonella enterica subsp. enterica serovar Paratyphi A str. diaminopimelate decarboxylase YP_002143526.1 2985987 R 554290 CDS YP_002143527.1 197363890 2987367..2988302 1 NC_011147.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR 2988302 554290002881 SSPA2684 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator LysR YP_002143527.1 2987367 D 554290 CDS YP_002143528.1 197363891 complement(2988274..2988954) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; racemase 2988954 554290002882 SSPA2685 Salmonella enterica subsp. enterica serovar Paratyphi A str. racemase YP_002143528.1 2988274 R 554290 CDS YP_002143529.1 197363892 complement(2989094..2990509) 1 NC_011147.1 similar to Salmonella typhi CT18 L-arabinose isomerase; L-arabinose isomerase 2990509 554290002883 SSPA2686 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-arabinose isomerase YP_002143529.1 2989094 R 554290 CDS YP_002143530.1 197363893 complement(2990863..2991624) 1 NC_011147.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 2991624 554290002884 SSPA2687 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-deoxy-D-gluconate 3-dehydrogenase YP_002143530.1 2990863 R 554290 CDS YP_002143531.1 197363894 complement(2991681..2992517) 1 NC_011147.1 '4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate'; 5-keto-4-deoxyuronate isomerase 2992517 554290002885 SSPA2688 Salmonella enterica subsp. enterica serovar Paratyphi A str. 5-keto-4-deoxyuronate isomerase YP_002143531.1 2991681 R 554290 CDS YP_002143532.1 197363895 complement(2992947..2994125) 1 NC_011147.1 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis'; acetyl-CoA acetyltransferase 2994125 554290002886 SSPA2689 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl-CoA acetyltransferase YP_002143532.1 2992947 R 554290 CDS YP_002143533.1 197363896 complement(2994248..2995111) 1 NC_011147.1 similar to Salmonella typhi CT18 possible regulatory protein; regulatory protein 2995111 554290002887 SSPA2690 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002143533.1 2994248 R 554290 CDS YP_002143534.1 197363897 2995188..2995670 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2995670 554290002888 SSPA2691 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143534.1 2995188 D 554290 CDS YP_002143535.1 197363898 2995812..2997041 1 NC_011147.1 similar to Salmonella typhi CT18 probable amino acid transport protein; amino acid transport protein 2997041 554290002889 SSPA2692 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid transport protein YP_002143535.1 2995812 D 554290 CDS YP_002143536.1 197363899 complement(2997072..2997344) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2997344 554290002890 SSPA2693 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143536.1 2997072 R 554290 CDS YP_002143537.1 197363900 2997473..2998309 1 NC_011147.1 membrane protein conferring nickel and cobalt resistance; nickel/cobalt efflux protein RcnA 2998309 554290002891 SSPA2694 Salmonella enterica subsp. enterica serovar Paratyphi A str. nickel/cobalt efflux protein RcnA YP_002143537.1 2997473 D 554290 CDS YP_002143538.2 449784976 complement(2998524..2999282) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2999282 554290002892 SSPA2695 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143538.2 2998524 R 554290 CDS YP_002143539.1 197363902 complement(2999269..2999781) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2999781 554290002893 SSPA2696 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143539.1 2999269 R 554290 CDS YP_002143540.1 197363903 complement(2999926..3000993) 1 NC_011147.1 hypothetical protein 3000993 554290002894 SSPA2697 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143540.1 2999926 R 554290 CDS YP_002143541.1 197363904 complement(3000990..3001733) 1 NC_011147.1 similar to Salmonella typhi CT18 probable fimbrial chaperone protein; fimbrial chaperone protein 3001733 554290002895 SSPA2698 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002143541.1 3000990 R 554290 CDS YP_002143542.1 197363905 complement(3001774..3004263) 1 NC_011147.1 similar to Salmonella typhi CT18 probable outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 3004263 554290002896 SSPA2699 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane fimbrial usher protein YP_002143542.1 3001774 R 554290 CDS YP_002143543.1 197363906 complement(3004383..3004967) 1 NC_011147.1 similar to Salmonella typhi CT18 probable fimbrial protein; fimbrial protein 3004967 554290002897 SSPA2700 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002143543.1 3004383 R 554290 CDS YP_002143544.1 197363907 complement(3005685..3006284) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3006284 554290002898 SSPA2701 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143544.1 3005685 R 554290 CDS YP_002143545.1 197363908 complement(3007579..3008037) 1 NC_011147.1 IS200 transposase 3008037 554290002900 SSPA2702 Salmonella enterica subsp. enterica serovar Paratyphi A str. IS200 transposase YP_002143545.1 3007579 R 554290 CDS YP_002143546.1 197363909 complement(3008418..3008816) 1 NC_011147.1 stability determinant protein; plasmid maintenance protein 3008816 554290002901 SSPA2703 Salmonella enterica subsp. enterica serovar Paratyphi A str. plasmid maintenance protein YP_002143546.1 3008418 R 554290 CDS YP_002143547.1 197363910 complement(3008816..3009043) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein (assiciated with virulence); hypothetical protein 3009043 554290002902 SSPA2704 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143547.1 3008816 R 554290 CDS YP_002143548.1 197363911 3009252..3009503 1 NC_011147.1 similar to Salmonella typhi CT18 endonuclease fragment; endonuclease fragment 3009503 554290002903 SSPA2705 Salmonella enterica subsp. enterica serovar Paratyphi A str. endonuclease fragment YP_002143548.1 3009252 D 554290 CDS YP_002143549.1 197363912 3009784..3010584 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3010584 554290002904 SSPA2706 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143549.1 3009784 D 554290 CDS YP_002143550.1 197363913 complement(3010869..3011621) 1 NC_011147.1 similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein 3011621 554290002906 SSPA2707 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143550.1 3010869 R 554290 CDS YP_002143551.1 197363914 3011892..3012437 1 NC_011147.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; isopentenyl-diphosphate delta-isomerase 3012437 554290002907 SSPA2708 Salmonella enterica subsp. enterica serovar Paratyphi A str. isopentenyl-diphosphate delta-isomerase YP_002143551.1 3011892 D 554290 CDS YP_002143552.1 197363915 complement(3012513..3014030) 1 NC_011147.1 'class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1'; lysyl-tRNA synthetase 3014030 lysS 554290002908 lysS Salmonella enterica subsp. enterica serovar Paratyphi A str. lysyl-tRNA synthetase YP_002143552.1 3012513 R 554290 CDS YP_002143553.1 197363916 complement(join(3014040..3015062,3015064..3015138)) 1 NC_011147.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 3015138 prfB 554290002909 prfB Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide chain release factor 2 YP_002143553.1 3014040 R 554290 CDS YP_002143554.1 197363917 complement(3015243..3016976) 1 NC_011147.1 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ 3016976 554290002910 SSPA2712 Salmonella enterica subsp. enterica serovar Paratyphi A str. ssDNA exonuclease RecJ YP_002143554.1 3015243 R 554290 CDS YP_002143555.1 197363918 complement(3016982..3017644) 1 NC_011147.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 3017644 554290002911 SSPA2713 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiol:disulfide interchange protein DsbC YP_002143555.1 3016982 R 554290 CDS YP_002143556.1 197363919 complement(3017719..3018615) 1 NC_011147.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 3018615 xerD 554290002912 xerD Salmonella enterica subsp. enterica serovar Paratyphi A str. site-specific tyrosine recombinase XerD YP_002143556.1 3017719 R 554290 CDS YP_002143557.1 197363920 3018728..3019249 1 NC_011147.1 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic'; flavodoxin FldB 3019249 554290002913 SSPA2715 Salmonella enterica subsp. enterica serovar Paratyphi A str. flavodoxin FldB YP_002143557.1 3018728 D 554290 CDS YP_002143558.1 197363921 complement(3019302..3019661) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3019661 554290002914 SSPA2716 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143558.1 3019302 R 554290 CDS YP_002143559.1 197363922 complement(3019696..3019962) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3019962 554290002915 SSPA2717 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143559.1 3019696 R 554290 CDS YP_002143560.1 197363923 3020212..3021192 1 NC_011147.1 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator 3021192 554290002916 SSPA2718 Salmonella enterica subsp. enterica serovar Paratyphi A str. global regulator YP_002143560.1 3020212 D 554290 CDS YP_002143561.1 197363924 complement(3021308..3021967) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3021967 554290002917 SSPA2719 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143561.1 3021308 R 554290 CDS YP_002143562.1 197363925 complement(3022132..3022443) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3022443 554290002918 SSPA2720 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143562.1 3022132 R 554290 CDS YP_002143563.1 197363926 3022602..3024035 1 NC_011147.1 similar to Salmonella typhi CT18 6-phospho-beta-glucosidase; 6-phospho-beta-glucosidase 3024035 554290002919 SSPA2721 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-phospho-beta-glucosidase YP_002143563.1 3022602 D 554290 CDS YP_002143564.1 197363927 complement(3024083..3024976) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3024976 554290002920 SSPA2722 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143564.1 3024083 R 554290 CDS YP_002143565.2 449784977 complement(3025432..3028305) 1 NC_011147.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3028305 554290002921 SSPA2723 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine dehydrogenase YP_002143565.2 3025432 R 554290 CDS YP_002143566.1 197363929 complement(3028468..3028857) 1 NC_011147.1 'part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor'; glycine cleavage system protein H 3028857 554290002922 SSPA2724 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine cleavage system protein H YP_002143566.1 3028468 R 554290 CDS YP_002143567.1 197363930 complement(3028883..3029977) 1 NC_011147.1 'catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein'; glycine cleavage system aminomethyltransferase T 3029977 gcvT 554290002923 gcvT Salmonella enterica subsp. enterica serovar Paratyphi A str. glycine cleavage system aminomethyltransferase T YP_002143567.1 3028883 R 554290 CDS YP_002143568.1 197363931 complement(3030432..3031634) 1 NC_011147.1 similar to Salmonella typhi CT18 possible monooxygenase; hypothetical protein 3031634 554290002924 SSPA2726 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143568.1 3030432 R 554290 CDS YP_002143569.1 197363932 complement(3031759..3032937) 1 NC_011147.1 'Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone'; 2-octaprenyl-6-methoxyphenyl hydroxylase 3032937 554290002925 SSPA2727 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-octaprenyl-6-methoxyphenyl hydroxylase YP_002143569.1 3031759 R 554290 CDS YP_002143570.2 449784978 complement(3032934..3034250) 1 NC_011147.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II 3034250 554290002926 SSPA2728 Salmonella enterica subsp. enterica serovar Paratyphi A str. proline aminopeptidase P II YP_002143570.2 3032934 R 554290 CDS YP_002143571.1 197363934 complement(3034276..3034860) 1 NC_011147.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 3034860 554290002927 SSPA2729 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143571.1 3034276 R 554290 CDS YP_002143572.1 197363935 3035021..3035350 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; Z-ring-associated protein 3035350 554290002928 SSPA2730 Salmonella enterica subsp. enterica serovar Paratyphi A str. Z-ring-associated protein YP_002143572.1 3035021 D 554290 CDS YP_002143573.2 449784979 3035644..3036192 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3036192 554290002930 SSPA2731 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143573.2 3035644 D 554290 CDS YP_002143574.1 197363937 complement(3036573..3037805) 1 NC_011147.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 3037805 554290002932 SSPA2732 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-3-phosphoglycerate dehydrogenase YP_002143574.1 3036573 R 554290 CDS YP_002143575.1 197363938 complement(3038072..3038731) 1 NC_011147.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 3038731 554290002933 SSPA2733 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribose-5-phosphate isomerase A YP_002143575.1 3038072 R 554290 CDS YP_002143576.1 197363939 3038885..3039778 1 NC_011147.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 3039778 554290002934 SSPA2734 Salmonella enterica subsp. enterica serovar Paratyphi A str. chromosome replication initiation inhibitor protein YP_002143576.1 3038885 D 554290 CDS YP_002143577.1 197363940 complement(3040044..3040790) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3040790 554290002935 SSPA2735 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143577.1 3040044 R 554290 CDS YP_002143578.1 197363941 complement(3040884..3041519) 1 NC_011147.1 Involved in the export of arginine; arginine exporter protein 3041519 554290002936 SSPA2736 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine exporter protein YP_002143578.1 3040884 R 554290 CDS YP_002143579.1 197363942 complement(3041720..3042580) 1 NC_011147.1 participates in the regulation of osmotic pressure changes within the cel; mechanosensitive channel MscS 3042580 554290002937 SSPA2737 Salmonella enterica subsp. enterica serovar Paratyphi A str. mechanosensitive channel MscS YP_002143579.1 3041720 R 554290 CDS YP_002143580.1 197363943 complement(3042803..3043882) 1 NC_011147.1 'catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate'; fructose-bisphosphate aldolase 3043882 554290002938 SSPA2738 Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose-bisphosphate aldolase YP_002143580.1 3042803 R 554290 CDS YP_002143581.1 197363944 complement(3043984..3045147) 1 NC_011147.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3045147 pgk 554290002939 pgk Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycerate kinase YP_002143581.1 3043984 R 554290 CDS YP_002143582.1 197363945 complement(3045169..3046215) 1 NC_011147.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 3046215 554290002940 SSPA2740 Salmonella enterica subsp. enterica serovar Paratyphi A str. erythrose 4-phosphate dehydrogenase YP_002143582.1 3045169 R 554290 CDS YP_002143583.1 197363946 3046589..3047014 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3047014 554290002941 SSPA2741 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143583.1 3046589 D 554290 CDS YP_002143584.1 197363947 3047040..3047618 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3047618 554290002942 SSPA2742 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143584.1 3047040 D 554290 CDS YP_002143585.2 449784980 3047619..3048326 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3048326 554290002943 SSPA2743 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143585.2 3047619 D 554290 CDS YP_002143586.1 197363949 3048308..3048991 1 NC_011147.1 'similar to Salmonella typhi CT18 possible ABC-transport protein, ATP-binding component'; ABC-transport protein ATP-binding protein 3048991 554290002944 SSPA2744 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC-transport protein ATP-binding protein YP_002143586.1 3048308 D 554290 CDS YP_002143587.1 197363950 3048985..3049641 1 NC_011147.1 'similar to Salmonella typhi CT18 possible ABC-transport protein, ATP-binding component'; ABC-transport protein ATP-binding protein 3049641 554290002945 SSPA2745 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC-transport protein ATP-binding protein YP_002143587.1 3048985 D 554290 CDS YP_002143588.1 197363951 complement(3049685..3051676) 1 NC_011147.1 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase'; transketolase 3051676 554290002946 SSPA2746 Salmonella enterica subsp. enterica serovar Paratyphi A str. transketolase YP_002143588.1 3049685 R 554290 CDS YP_002143589.1 197363952 3051952..3052710 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3052710 554290002947 SSPA2747 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143589.1 3051952 D 554290 CDS YP_002143590.1 197363953 complement(3052811..3053731) 1 NC_011147.1 catalyzes the formation of putrescine from agmatine; agmatinase 3053731 554290002948 SSPA2748 Salmonella enterica subsp. enterica serovar Paratyphi A str. agmatinase YP_002143590.1 3052811 R 554290 CDS YP_002143591.2 449784981 complement(3053959..3055935) 1 NC_011147.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 3055935 554290002949 SSPA2749 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine decarboxylase YP_002143591.2 3053959 R 554290 CDS YP_002143592.1 197363955 complement(3055944..3056075) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3056075 554290002950 SSPA2750 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143592.1 3055944 R 554290 CDS YP_002143593.1 197363956 3056385..3056576 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3056576 554290002951 SSPA2751 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143593.1 3056385 D 554290 CDS YP_002143594.1 197363957 3056725..3057879 1 NC_011147.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3057879 554290002952 SSPA2752 Salmonella enterica subsp. enterica serovar Paratyphi A str. S-adenosylmethionine synthetase YP_002143594.1 3056725 D 554290 CDS YP_002143595.1 197363958 3058372..3059766 1 NC_011147.1 similar to Salmonella typhi CT18 galactose-proton symport (galactose transporter); galactose-proton symporter 3059766 554290002953 SSPA2753 Salmonella enterica subsp. enterica serovar Paratyphi A str. galactose-proton symporter YP_002143595.1 3058372 D 554290 CDS YP_002143596.1 197363959 3059845..3060342 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3060342 554290002954 SSPA2754 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143596.1 3059845 D 554290 CDS YP_002143597.1 197363960 3060437..3061144 1 NC_011147.1 similar to Salmonella typhi CT18 endonuclease I; endonuclease I 3061144 554290002955 SSPA2755 Salmonella enterica subsp. enterica serovar Paratyphi A str. endonuclease I YP_002143597.1 3060437 D 554290 CDS YP_002143598.1 197363961 3061221..3061952 1 NC_011147.1 'in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase'; 16S ribosomal RNA methyltransferase RsmE 3061952 554290002956 SSPA2756 Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S ribosomal RNA methyltransferase RsmE YP_002143598.1 3061221 D 554290 CDS YP_002143599.1 197363962 3061972..3062919 1 NC_011147.1 'catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione'; glutathione synthetase 3062919 554290002957 SSPA2757 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione synthetase YP_002143599.1 3061972 D 554290 CDS YP_002143600.1 197363963 3063135..3063698 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3063698 554290002958 SSPA2758 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143600.1 3063135 D 554290 CDS YP_002143601.1 197363964 3063698..3064114 1 NC_011147.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; holliday junction resolvase-like protein 3064114 554290002959 SSPA2759 Salmonella enterica subsp. enterica serovar Paratyphi A str. holliday junction resolvase-like protein YP_002143601.1 3063698 D 554290 CDS YP_002143602.1 197363965 complement(3064161..3064847) 1 NC_011147.1 global regulatory protein-like protein 3064847 554290002960 SSPA2760 Salmonella enterica subsp. enterica serovar Paratyphi A str. global regulatory protein-like protein YP_002143602.1 3064161 R 554290 CDS YP_002143603.1 197363966 complement(3064979..3065959) 1 NC_011147.1 'similar to Salmonella typhi Ty2 Type II secretion,ATP-binding, protein'; type II secretion, ATP-binding, protein 3065959 554290002961 SSPA2761 Salmonella enterica subsp. enterica serovar Paratyphi A str. type II secretion, ATP-binding, protein YP_002143603.1 3064979 R 554290 CDS YP_002143604.1 197363967 3065977..3066681 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3066681 554290002962 SSPA2762 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143604.1 3065977 D 554290 CDS YP_002143605.1 197363968 3066700..3067266 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3067266 554290002963 SSPA2763 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143605.1 3066700 D 554290 CDS YP_002143606.1 197363969 3067263..3067553 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3067553 554290002964 SSPA2764 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143606.1 3067263 D 554290 CDS YP_002143607.1 197363970 3067561..3068154 1 NC_011147.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3068154 554290002965 SSPA2765 Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxyribonucleotide triphosphate pyrophosphatase YP_002143607.1 3067561 D 554290 CDS YP_002143608.1 197363971 3068147..3069283 1 NC_011147.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3069283 554290002966 SSPA2766 Salmonella enterica subsp. enterica serovar Paratyphi A str. coproporphyrinogen III oxidase YP_002143608.1 3068147 D 554290 CDS YP_002143609.1 197363972 complement(3069374..3070381) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3070381 554290002967 SSPA2767 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143609.1 3069374 R 554290 CDS YP_002143610.1 197363973 complement(3070514..3071560) 1 NC_011147.1 'catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis'; L-asparaginase II 3071560 ansB 554290002968 ansB Salmonella enterica subsp. enterica serovar Paratyphi A str. L-asparaginase II YP_002143610.1 3070514 R 554290 CDS YP_002143611.1 197363974 complement(3071749..3072465) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3072465 554290002969 SSPA2769 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143611.1 3071749 R 554290 CDS YP_002143612.1 197363975 complement(3072518..3072844) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3072844 554290002970 SSPA2770 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143612.1 3072518 R 554290 CDS YP_002143613.1 197363976 complement(3072844..3073563) 1 NC_011147.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3073563 trmB 554290002971 trmB Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA (guanine-N(7)-)-methyltransferase YP_002143613.1 3072844 R 554290 CDS YP_002143614.1 197363977 3073718..3074770 1 NC_011147.1 similar to Salmonella typhi CT18 A/G-specific adenine glycosylase; adenine DNA glycosylase 3074770 554290002972 SSPA2772 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenine DNA glycosylase YP_002143614.1 3073718 D 554290 CDS YP_002143615.1 197363978 3074798..3075073 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3075073 554290002973 SSPA2773 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143615.1 3074798 D 554290 CDS YP_002143616.1 197363979 3075186..3076271 1 NC_011147.1 'Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues'; murein transglycosylase C 3076271 mltC 554290002974 mltC Salmonella enterica subsp. enterica serovar Paratyphi A str. murein transglycosylase C YP_002143616.1 3075186 D 554290 CDS YP_002143617.1 197363980 3076488..3077744 1 NC_011147.1 similar to Salmonella typhi CT18 nucleoside permease; nucleoside permease 3077744 554290002975 SSPA2775 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoside permease YP_002143617.1 3076488 D 554290 CDS YP_002143618.1 197363981 complement(3077806..3079932) 1 NC_011147.1 similar to Salmonella typhimurium ornithine decarboxylase isozyme; ornithine decarboxylase 3079932 554290002976 SSPA2776 Salmonella enterica subsp. enterica serovar Paratyphi A str. ornithine decarboxylase YP_002143618.1 3077806 R 554290 CDS YP_002143619.1 197363982 3080366..3081073 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3081073 554290002977 SSPA2777 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143619.1 3080366 D 554290 CDS YP_002143620.1 197363983 3082477..3082596 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3082596 554290002981 SSPA2778 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143620.1 3082477 D 554290 CDS YP_002143621.1 197363984 3082805..3082993 1 NC_011147.1 hypothetical protein 3082993 554290002982 SSPA2779 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143621.1 3082805 D 554290 CDS YP_002143622.1 197363985 3082983..3083279 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3083279 554290002983 SSPA2780 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143622.1 3082983 D 554290 CDS YP_002143623.1 197363986 3083663..3083929 1 NC_011147.1 similar to Salmonella typhi CT18 bacteriocin immunity protein; bacteriocin immunity protein 3083929 554290002985 SSPA2781 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriocin immunity protein YP_002143623.1 3083663 D 554290 CDS YP_002143624.1 197363987 3084172..3084450 1 NC_011147.1 similar to Salmonella typhi CT18 bacteriocin immunity protein; bacteriocin immunity protein 3084450 554290002987 SSPA2782 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacteriocin immunity protein YP_002143624.1 3084172 D 554290 CDS YP_002143625.1 197363988 3084853..3085356 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3085356 554290002988 SSPA2783 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143625.1 3084853 D 554290 CDS YP_002143626.1 197363989 3085615..3085800 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3085800 554290002989 SSPA2784 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143626.1 3085615 D 554290 CDS YP_002143627.1 197363990 3085997..3086527 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3086527 554290002990 SSPA2785 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143627.1 3085997 D 554290 CDS YP_002143628.1 197363991 3086529..3087155 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3087155 554290002991 SSPA2786 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143628.1 3086529 D 554290 CDS YP_002143629.1 197363992 complement(3087291..3087461) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3087461 554290002992 SSPA2787 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143629.1 3087291 R 554290 CDS YP_002143630.1 197363993 3087605..3087811 1 NC_011147.1 similar to Salmonella typhi CT18 possible membrane protein; hypothetical protein 3087811 554290002993 SSPA2788 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143630.1 3087605 D 554290 CDS YP_002143631.1 197363994 complement(3087836..3088063) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3088063 554290002994 SSPA2789 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143631.1 3087836 R 554290 CDS YP_002143632.1 197363995 3088589..3089272 1 NC_011147.1 similar to Salmonella typhi CT18 LysR-family transcriptional regulator; LysR family transcriptional regulator 3089272 554290002995 SSPA2790 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002143632.1 3088589 D 554290 CDS YP_002143633.1 197363996 complement(3089377..3089901) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3089901 554290002996 SSPA2791 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143633.1 3089377 R 554290 CDS YP_002143634.1 197363997 complement(3089912..3091411) 1 NC_011147.1 similar to Salmonella typhi CT18 possible amino acid transport protein; amino acid transport protein 3091411 554290002997 SSPA2792 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid transport protein YP_002143634.1 3089912 R 554290 CDS YP_002143635.2 449784982 complement(3091620..3091994) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3091994 554290002998 SSPA2793 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143635.2 3091620 R 554290 CDS YP_002143636.1 197363999 complement(3092009..3093310) 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 3093310 554290002999 SSPA2794 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002143636.1 3092009 R 554290 CDS YP_002143637.1 197364000 3093472..3094956 1 NC_011147.1 similar to Salmonella typhi CT18 possible aldehyde dehydrogenase; aldehyde dehydrogenase 3094956 554290003000 SSPA2795 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldehyde dehydrogenase YP_002143637.1 3093472 D 554290 CDS YP_002143638.1 197364001 complement(3095092..3095475) 1 NC_011147.1 inhibitor of RssB activity in response to DNA damage; blocks degradation of stationary phase sigma factor RpoS; DNA replication/recombination/repair protein 3095475 iraD 554290003001 iraD Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA replication/recombination/repair protein YP_002143638.1 3095092 R 554290 CDS YP_002143639.1 197364002 complement(3095472..3095957) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3095957 554290003002 SSPA2797 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143639.1 3095472 R 554290 CDS YP_002143640.1 197364003 complement(3096682..3097605) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3097605 554290003003 SSPA2798 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143640.1 3096682 R 554290 CDS YP_002143641.2 449784983 complement(3097644..3098522) 1 NC_011147.1 similar to Salmonella typhi CT18 possible hydrolase; hydrolase 3098522 554290003004 SSPA2799 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002143641.2 3097644 R 554290 CDS YP_002143642.1 197364005 complement(3098918..3100222) 1 NC_011147.1 similar to Salmonella typhi CT18 hexuronate transporter; hexuronate transporter 3100222 554290003005 SSPA2800 Salmonella enterica subsp. enterica serovar Paratyphi A str. hexuronate transporter YP_002143642.1 3098918 R 554290 CDS YP_002143643.1 197364006 3100627..3101811 1 NC_011147.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 3101811 554290003006 SSPA2801 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannonate dehydratase YP_002143643.1 3100627 D 554290 CDS YP_002143644.1 197364007 3101922..3103394 1 NC_011147.1 similar to Salmonella typhi CT18 D-mannonate oxidoreductase; D-mannonate oxidoreductase 3103394 554290003007 SSPA2802 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-mannonate oxidoreductase YP_002143644.1 3101922 D 554290 CDS YP_002143645.1 197364008 3103406..3104818 1 NC_011147.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3104818 554290003008 SSPA2803 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucuronate isomerase YP_002143645.1 3103406 D 554290 CDS YP_002143646.1 197364009 complement(3105118..3106173) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3106173 554290003009 SSPA2804 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143646.1 3105118 R 554290 CDS YP_002143647.1 197364010 complement(3106843..3108699) 1 NC_011147.1 catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 3108699 554290003010 SSPA2805 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase YP_002143647.1 3106843 R 554290 CDS YP_002143648.1 197364011 3108926..3109792 1 NC_011147.1 YghU; B2989; one of eight glutathione transferase proteins from E. coli; glutathione S-transferase 3109792 554290003011 SSPA2806 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione S-transferase YP_002143648.1 3108926 D 554290 CDS YP_002143649.1 197364012 complement(3109860..3110570) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; molybdate ABC transporter substrate-binding protein 3110570 554290003012 SSPA2807 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdate ABC transporter substrate-binding protein YP_002143649.1 3109860 R 554290 CDS YP_002143650.1 197364013 complement(3111698..3111946) 1 NC_011147.1 similar to Salmonella typhi CT18 hydrogenase-2 component protein; hydrogenase 2 accessory protein HypG 3111946 554290003014 SSPA2808 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2 accessory protein HypG YP_002143650.1 3111698 R 554290 CDS YP_002143651.1 197364014 complement(3111974..3112315) 1 NC_011147.1 plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein HybF 3112315 554290003015 SSPA2809 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase nickel incorporation protein HybF YP_002143651.1 3111974 R 554290 CDS YP_002143652.1 197364015 complement(3112308..3112796) 1 NC_011147.1 similar to Salmonella typhi CT18 hydrogenase-2 component protein; hydrogenase 2-specific chaperone 3112796 554290003016 SSPA2810 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2-specific chaperone YP_002143652.1 3112308 R 554290 CDS YP_002143653.1 197364016 complement(3112789..3113283) 1 NC_011147.1 protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); hydrogenase 2 maturation endopeptidase 3113283 hybD 554290003017 hybD Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2 maturation endopeptidase YP_002143653.1 3112789 R 554290 CDS YP_002143654.1 197364017 complement(3113283..3114986) 1 NC_011147.1 involved in hydrogen uptake; hydrogenase 2 large subunit 3114986 554290003018 SSPA2812 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2 large subunit YP_002143654.1 3113283 R 554290 CDS YP_002143655.1 197364018 complement(3114983..3116161) 1 NC_011147.1 'HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits'; hydrogenase 2 b cytochrome subunit 3116161 554290003019 SSPA2813 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2 b cytochrome subunit YP_002143655.1 3114983 R 554290 CDS YP_002143656.1 197364019 complement(3116151..3117137) 1 NC_011147.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA 3117137 554290003020 SSPA2814 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2 protein HybA YP_002143656.1 3116151 R 554290 CDS YP_002143657.1 197364020 complement(3117140..3118258) 1 NC_011147.1 involved in hydrogen uptake; hydrogenase 2 small subunit 3118258 554290003021 SSPA2815 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrogenase 2 small subunit YP_002143657.1 3117140 R 554290 CDS YP_002143658.1 197364021 complement(3118448..3118735) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3118735 554290003022 SSPA2816 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143658.1 3118448 R 554290 CDS YP_002143659.1 197364022 complement(3118820..3120463) 1 NC_011147.1 similar to |33596128|ref|NP_883771.1| methyl-accepting chemotaxis protein I [Bordetella parapertussis 12822]; hypothetical protein 3120463 554290003023 SSPA2817 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143659.1 3118820 R 554290 CDS YP_002143660.1 197364023 complement(3120770..3121264) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3121264 554290003024 SSPA2818 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143660.1 3120770 R 554290 CDS YP_002143661.1 197364024 complement(3121482..3121997) 1 NC_011147.1 similar to Salmonella typhimurium ATP-dependent RNA helicase-like protein; ATP-dependent RNA helicase-like protein 3121997 554290003025 SSPA2819 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase-like protein YP_002143661.1 3121482 R 554290 CDS YP_002143662.1 197364025 3122089..3122499 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3122499 554290003026 SSPA2820 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143662.1 3122089 D 554290 CDS YP_002143663.1 197364026 3122516..3122890 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3122890 554290003027 SSPA2821 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143663.1 3122516 D 554290 CDS YP_002143664.1 197364027 3123014..3123898 1 NC_011147.1 similar to Salmonella typhi CT18 possible oxidoreductase; oxidoreductase 3123898 554290003028 SSPA2822 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002143664.1 3123014 D 554290 CDS YP_002143665.1 197364028 complement(3124011..3124436) 1 NC_011147.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbD 3124436 554290003029 SSPA2823 Salmonella enterica subsp. enterica serovar Paratyphi A str. biopolymer transport protein ExbD YP_002143665.1 3124011 R 554290 CDS YP_002143666.1 197364029 complement(3124443..3125177) 1 NC_011147.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbB 3125177 554290003030 SSPA2824 Salmonella enterica subsp. enterica serovar Paratyphi A str. biopolymer transport protein ExbB YP_002143666.1 3124443 R 554290 CDS YP_002143667.1 197364030 complement(3125170..3125319) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3125319 554290003031 SSPA2825 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143667.1 3125170 R 554290 CDS YP_002143668.1 197364031 3125429..3126616 1 NC_011147.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 3126616 554290003032 SSPA2826 Salmonella enterica subsp. enterica serovar Paratyphi A str. cystathionine beta-lyase YP_002143668.1 3125429 D 554290 CDS YP_002143669.1 197364032 3126756..3127415 1 NC_011147.1 similar to Salmonella typhi CT18 DedA-family integral membrane protein; DedA-family integral membrane protein 3127415 554290003033 SSPA2827 Salmonella enterica subsp. enterica serovar Paratyphi A str. DedA-family integral membrane protein YP_002143669.1 3126756 D 554290 CDS YP_002143670.1 197364033 complement(3127479..3128396) 1 NC_011147.1 similar to Salmonella typhi CT18 probable AraC-family trancriptional regulatory protein; AraC family transcriptional regulator 3128396 554290003034 SSPA2828 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC family transcriptional regulator YP_002143670.1 3127479 R 554290 CDS YP_002143671.1 197364034 3128571..3129734 1 NC_011147.1 similar to Salmonella typhi CT18 probable alcohol dehydrogenase; alcohol dehydrogenase 3129734 554290003035 SSPA2829 Salmonella enterica subsp. enterica serovar Paratyphi A str. alcohol dehydrogenase YP_002143671.1 3128571 D 554290 CDS YP_002143672.1 197364035 3129840..3130667 1 NC_011147.1 'methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate'; 2,5-diketo-D-gluconate reductase A 3130667 dkgA 554290003036 dkgA Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,5-diketo-D-gluconate reductase A YP_002143672.1 3129840 D 554290 CDS YP_002143673.1 197364036 3130855..3132318 1 NC_011147.1 similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein 3132318 554290003037 SSPA2831 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002143673.1 3130855 D 554290 CDS YP_002143674.1 197364037 3132363..3132818 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3132818 554290003038 SSPA2832 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143674.1 3132363 D 554290 CDS YP_002143675.1 197364038 complement(3132954..3135125) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3135125 554290003039 SSPA2833 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143675.1 3132954 R 554290 CDS YP_002143676.1 197364039 complement(3135259..3136449) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3136449 554290003040 SSPA2834 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143676.1 3135259 R 554290 CDS YP_002143677.1 197364040 complement(3136745..3138169) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3138169 554290003041 SSPA2835 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143677.1 3136745 R 554290 CDS YP_002143678.1 197364041 complement(3138185..3139168) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3139168 554290003042 SSPA2836 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143678.1 3138185 R 554290 CDS YP_002143679.1 197364042 complement(3140721..3142133) 1 NC_011147.1 similar to Salmonella typhi CT18 SufI protein; repressor protein for FtsI 3142133 554290003044 SSPA2837 Salmonella enterica subsp. enterica serovar Paratyphi A str. repressor protein for FtsI YP_002143679.1 3140721 R 554290 CDS YP_002143680.1 197364043 complement(3142207..3142944) 1 NC_011147.1 similar to Salmonella typhi CT18 1-acyl-glycerol-3-phosphate acyltransferase; 1-acylglycerol-3-phosphate O-acyltransferase 3142944 554290003045 SSPA2838 Salmonella enterica subsp. enterica serovar Paratyphi A str. 1-acylglycerol-3-phosphate O-acyltransferase YP_002143680.1 3142207 R 554290 CDS YP_002143681.1 197364044 complement(3143201..3145459) 1 NC_011147.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 3145459 554290003046 SSPA2839 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA topoisomerase IV subunit A YP_002143681.1 3143201 R 554290 CDS YP_002143682.1 197364045 complement(3145570..3146436) 1 NC_011147.1 similar to Salmonella typhi CT18 possible AraC-family transcriptional regulator; AraC family transcriptional regulator 3146436 554290003047 SSPA2840 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC family transcriptional regulator YP_002143682.1 3145570 R 554290 CDS YP_002143683.1 197364046 complement(3146508..3146900) 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3146900 554290003048 SSPA2841 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143683.1 3146508 R 554290 CDS YP_002143684.1 197364047 3147052..3147711 1 NC_011147.1 response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; DNA-binding transcriptional regulator QseB 3147711 554290003049 SSPA2842 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator QseB YP_002143684.1 3147052 D 554290 CDS YP_002143685.1 197364048 3147708..3149057 1 NC_011147.1 similar to Salmonella typhi CT18 probable two-component system sensor histidine kinase; sensor protein QseC 3149057 554290003050 SSPA2843 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor protein QseC YP_002143685.1 3147708 D 554290 CDS YP_002143686.1 197364049 3149164..3149745 1 NC_011147.1 similar to Salmonella typhimurium NADPH specific quinone oxidoreductase (drug modulator); NADPH specific quinone oxidoreductase 3149745 554290003051 SSPA2844 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADPH specific quinone oxidoreductase YP_002143686.1 3149164 D 554290 CDS YP_002143687.1 197364050 3149777..3150091 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3150091 554290003052 SSPA2845 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143687.1 3149777 D 554290 CDS YP_002143688.1 197364051 complement(3150216..3152108) 1 NC_011147.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 3152108 554290003053 SSPA2846 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA topoisomerase IV subunit B YP_002143688.1 3150216 R 554290 CDS YP_002143689.1 197364052 complement(3152136..3152717) 1 NC_011147.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA 3152717 554290003054 SSPA2847 Salmonella enterica subsp. enterica serovar Paratyphi A str. esterase YqiA YP_002143689.1 3152136 R 554290 CDS YP_002143690.1 197364053 complement(3152717..3153544) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; cyclic 3',5'-adenosine monophosphate phosphodiesterase 3153544 554290003055 SSPA2848 Salmonella enterica subsp. enterica serovar Paratyphi A str. cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_002143690.1 3152717 R 554290 CDS YP_002143691.1 197364054 complement(3153569..3153991) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3153991 554290003056 SSPA2849 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143691.1 3153569 R 554290 CDS YP_002143692.1 197364055 complement(3153988..3154620) 1 NC_011147.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF 3154620 nudF 554290003057 nudF Salmonella enterica subsp. enterica serovar Paratyphi A str. ADP-ribose pyrophosphatase NudF YP_002143692.1 3153988 R 554290 CDS YP_002143693.1 197364056 3154821..3156296 1 NC_011147.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 3156296 tolC 554290003058 tolC Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane channel protein YP_002143693.1 3154821 D 554290 CDS YP_002143694.1 197364057 3156509..3157180 1 NC_011147.1 similar to Salmonella typhi CT18 possible lipoprotein; hypothetical protein 3157180 554290003059 SSPA2852 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143694.1 3156509 D 554290 CDS YP_002143695.1 197364058 3157186..3158349 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3158349 554290003060 SSPA2853 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143695.1 3157186 D 554290 CDS YP_002143696.1 197364059 complement(3158411..3159241) 1 NC_011147.1 'seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine'; hypothetical protein 3159241 554290003061 SSPA2854 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143696.1 3158411 R 554290 CDS YP_002143697.1 197364060 3159340..3160113 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; zinc transporter ZupT 3160113 554290003062 SSPA2855 Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc transporter ZupT YP_002143697.1 3159340 D 554290 CDS YP_002143698.1 197364061 3160636..3162432 1 NC_011147.1 similar to Salmonella typhi Ty2 probable arylsulfate sulfotransferase; arylsulfate sulfotransferase 3162432 554290003063 SSPA2856 Salmonella enterica subsp. enterica serovar Paratyphi A str. arylsulfate sulfotransferase YP_002143698.1 3160636 D 554290 CDS YP_002143699.1 197364062 3162452..3163123 1 NC_011147.1 dsbA-like protein 3163123 554290003064 SSPA2857 Salmonella enterica subsp. enterica serovar Paratyphi A str. dsbA-like protein YP_002143699.1 3162452 D 554290 CDS YP_002143700.1 197364063 3163138..3163815 1 NC_011147.1 disulfide oxidoreductase 3163815 554290003065 SSPA2858 Salmonella enterica subsp. enterica serovar Paratyphi A str. disulfide oxidoreductase YP_002143700.1 3163138 D 554290 CDS YP_002143701.1 197364064 complement(3163986..3164639) 1 NC_011147.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3164639 ribB 554290003066 ribB Salmonella enterica subsp. enterica serovar Paratyphi A str. 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002143701.1 3163986 R 554290 CDS YP_002143702.1 197364065 3165016..3165372 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3165372 554290003067 SSPA2860 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143702.1 3165016 D 554290 CDS YP_002143703.1 197364066 complement(3165447..3165650) 1 NC_011147.1 Involved in glycogen synthesis. May be involved in glycogen priming; glycogen synthesis protein GlgS 3165650 glgS 554290003068 glgS Salmonella enterica subsp. enterica serovar Paratyphi A str. glycogen synthesis protein GlgS YP_002143703.1 3165447 R 554290 CDS YP_002143704.1 197364067 3165914..3166534 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3166534 554290003069 SSPA2862 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143704.1 3165914 D 554290 CDS YP_002143705.1 197364068 3166553..3168232 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3168232 554290003070 SSPA2863 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143705.1 3166553 D 554290 CDS YP_002143706.1 197364069 complement(3168692..3170125) 1 NC_011147.1 'catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose'; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3170125 554290003071 SSPA2864 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_002143706.1 3168692 R 554290 CDS YP_002143707.1 197364070 complement(3170173..3173016) 1 NC_011147.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3173016 554290003072 SSPA2865 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_002143707.1 3170173 R 554290 CDS YP_002143708.1 197364071 complement(3173134..3174435) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3174435 554290003073 SSPA2866 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143708.1 3173134 R 554290 CDS YP_002143709.1 197364072 3174677..3175291 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; signal transduction protein 3175291 554290003074 SSPA2867 Salmonella enterica subsp. enterica serovar Paratyphi A str. signal transduction protein YP_002143709.1 3174677 D 554290 CDS YP_002143710.1 197364073 3175354..3176595 1 NC_011147.1 'catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases'; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3176595 cca 554290003075 cca Salmonella enterica subsp. enterica serovar Paratyphi A str. multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_002143710.1 3175354 D 554290 CDS YP_002143711.1 197364074 complement(3176700..3177521) 1 NC_011147.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 3177521 554290003076 SSPA2869 Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyl pyrophosphate phosphatase YP_002143711.1 3176700 R 554290 CDS YP_002143712.1 197364075 complement(3177619..3177981) 1 NC_011147.1 'catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin'; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 3177981 folB 554290003077 folB Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase YP_002143712.1 3177619 R 554290 CDS YP_002143713.1 197364076 3178085..3178696 1 NC_011147.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 3178696 554290003078 SSPA2871 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate acyltransferase PlsY YP_002143713.1 3178085 D 554290 CDS YP_002143714.1 197364077 3178752..3179042 1 NC_011147.1 hypothetical protein 3179042 554290003079 SSPA2872 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143714.1 3178752 D 554290 CDS YP_002143715.1 197364078 complement(3178946..3179959) 1 NC_011147.1 'in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity'; DNA-binding/iron metalloprotein/AP endonuclease 3179959 554290003080 SSPA2873 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding/iron metalloprotein/AP endonuclease YP_002143715.1 3178946 R 554290 CDS YP_002143716.1 197364079 3180187..3180402 1 NC_011147.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3180402 rpsU 554290003081 rpsU Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S21 YP_002143716.1 3180187 D 554290 CDS YP_002143717.1 197364080 3180638..3182383 1 NC_011147.1 synthesizes RNA primers at the replication forks; DNA primase 3182383 dnaG 554290003082 dnaG Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA primase YP_002143717.1 3180638 D 554290 CDS YP_002143718.1 197364081 3182398..3184380 1 NC_011147.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3184380 554290003083 SSPA2876 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA polymerase sigma factor RpoD YP_002143718.1 3182398 D 554290 CDS YP_002143719.1 197364082 complement(3184504..3185010) 1 NC_011147.1 similar to Salmonella typhi CT18 G/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase 3185010 554290003084 SSPA2877 Salmonella enterica subsp. enterica serovar Paratyphi A str. G/U mismatch-specific DNA glycosylase YP_002143719.1 3184504 R 554290 CDS YP_002143720.1 197364083 complement(3185291..3186058) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3186058 554290003086 SSPA2878 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143720.1 3185291 R 554290 CDS YP_002143721.1 197364084 3186293..3186937 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3186937 554290003087 SSPA2879 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143721.1 3186293 D 554290 CDS YP_002143722.1 197364085 complement(3186934..3188499) 1 NC_011147.1 similar to Salmonella typhi CT18 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis protein II 3188499 554290003088 SSPA2880 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyl-accepting chemotaxis protein II YP_002143722.1 3186934 R 554290 CDS YP_002143723.1 197364086 complement(3188887..3190407) 1 NC_011147.1 similar to Salmonella typhi Ty2 aerotaxis receptor protein; aerotaxis receptor protein 3190407 554290003089 SSPA2881 Salmonella enterica subsp. enterica serovar Paratyphi A str. aerotaxis receptor protein YP_002143723.1 3188887 R 554290 CDS YP_002143724.2 449784984 3190810..3192216 1 NC_011147.1 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 3192216 554290003090 SSPA2882 Salmonella enterica subsp. enterica serovar Paratyphi A str. putrescine--2-oxoglutarate aminotransferase YP_002143724.2 3190810 D 554290 CDS YP_002143725.1 197364088 3192387..3194405 1 NC_011147.1 'similar to Salmonella typhimurium 2,4-dieonyl-coa reductase'; 2,4-dieonyl-coa reductase 3194405 554290003091 SSPA2883 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,4-dieonyl-coa reductase YP_002143725.1 3192387 D 554290 CDS YP_002143726.1 197364089 complement(3194486..3195622) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3195622 554290003092 SSPA2884 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143726.1 3194486 R 554290 CDS YP_002143727.1 197364090 3195708..3196205 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3196205 554290003093 SSPA2885 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143727.1 3195708 D 554290 CDS YP_002143728.1 197364091 3196357..3197049 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3197049 554290003094 SSPA2886 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143728.1 3196357 D 554290 CDS YP_002143729.1 197364092 3197101..3198135 1 NC_011147.1 similar to Salmonella typhi CT18 possible oxidoreductase; oxidoreductase 3198135 554290003095 SSPA2887 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002143729.1 3197101 D 554290 CDS YP_002143730.1 197364093 3198405..3199373 1 NC_011147.1 similar to Salmonella typhi CT18 possible drug efflux protein; drug efflux protein 3199373 554290003097 SSPA2888 Salmonella enterica subsp. enterica serovar Paratyphi A str. drug efflux protein YP_002143730.1 3198405 D 554290 CDS YP_002143731.1 197364094 3199628..3200872 1 NC_011147.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 3200872 554290003098 SSPA2889 Salmonella enterica subsp. enterica serovar Paratyphi A str. serine/threonine transporter SstT YP_002143731.1 3199628 D 554290 CDS YP_002143732.1 197364095 3201322..3201984 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3201984 554290003099 SSPA2890 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143732.1 3201322 D 554290 CDS YP_002143733.1 197364096 3201988..3202371 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3202371 554290003100 SSPA2891 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143733.1 3201988 D 554290 CDS YP_002143734.1 197364097 3202516..3202884 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3202884 554290003101 SSPA2892 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143734.1 3202516 D 554290 CDS YP_002143735.1 197364098 3203234..3203632 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3203632 554290003102 SSPA2893 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143735.1 3203234 D 554290 CDS YP_002143736.1 197364099 3203629..3203928 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3203928 554290003103 SSPA2894 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143736.1 3203629 D 554290 CDS YP_002143737.1 197364100 3204073..3204558 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3204558 554290003104 SSPA2895 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143737.1 3204073 D 554290 CDS YP_002143738.1 197364101 3204626..3205612 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3205612 554290003105 SSPA2896 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143738.1 3204626 D 554290 CDS YP_002143739.1 197364102 3205736..3206101 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3206101 554290003106 SSPA2897 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143739.1 3205736 D 554290 CDS YP_002143740.1 197364103 complement(3206140..3207036) 1 NC_011147.1 similar to Salmonella typhi CT18 possible LysR-family transcriptional regulator; LysR family transcriptional regulator 3207036 554290003107 SSPA2898 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002143740.1 3206140 R 554290 CDS YP_002143741.1 197364104 3207141..3207842 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3207842 554290003108 SSPA2899 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143741.1 3207141 D 554290 CDS YP_002143742.1 197364105 complement(3208135..3209445) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3209445 554290003110 SSPA2900 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143742.1 3208135 R 554290 CDS YP_002143743.1 197364106 complement(3209471..3210802) 1 NC_011147.1 Pseudogene in Paratyphi A strain ATCC9150 (SPA3108) due to SNP @nt332 introducing STOP codon after aa110.; hypothetical protein 3210802 554290003111 SSPA2900a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143743.1 3209471 R 554290 CDS YP_002143744.1 197364107 complement(3211117..3212481) 1 NC_011147.1 similar to Salmonella typhi CT18 L-serine dehydratase; L-serine dehydratase 3212481 554290003112 SSPA2901 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-serine dehydratase YP_002143744.1 3211117 R 554290 CDS YP_002143745.1 197364108 complement(3212551..3214845) 1 NC_011147.1 similar to Salmonella typhi CT18 probable formate acetyltransferase; formate acetyltransferase 3214845 554290003113 SSPA2904 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate acetyltransferase YP_002143745.1 3212551 R 554290 CDS YP_002143746.1 197364109 complement(3214879..3216087) 1 NC_011147.1 catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism; propionate/acetate kinase 3216087 554290003114 SSPA2905 Salmonella enterica subsp. enterica serovar Paratyphi A str. propionate/acetate kinase YP_002143746.1 3214879 R 554290 CDS YP_002143747.1 197364110 complement(3216154..3217485) 1 NC_011147.1 involved in the import of threonine and serine in combination with the import of a proton; threonine/serine transporter TdcC 3217485 554290003115 SSPA2906 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonine/serine transporter TdcC YP_002143747.1 3216154 R 554290 CDS YP_002143748.1 197364111 complement(3217506..3218495) 1 NC_011147.1 catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; threonine dehydratase 3218495 554290003116 SSPA2907 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonine dehydratase YP_002143748.1 3217506 R 554290 CDS YP_002143749.1 197364112 complement(3218593..3219531) 1 NC_011147.1 regulates the tdcABCDEFG operon which is involved in amino acid degradation; DNA-binding transcriptional activator TdcA 3219531 554290003117 SSPA2908 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator TdcA YP_002143749.1 3218593 R 554290 CDS YP_002143750.1 197364113 complement(3220991..3222136) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; glycerate kinase 3222136 554290003119 SSPA2909 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerate kinase YP_002143750.1 3220991 R 554290 CDS YP_002143751.1 197364114 complement(3222234..3223118) 1 NC_011147.1 catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase 3223118 garR 554290003120 garR Salmonella enterica subsp. enterica serovar Paratyphi A str. tartronate semialdehyde reductase YP_002143751.1 3222234 R 554290 CDS YP_002143752.1 197364115 complement(3223150..3223866) 1 NC_011147.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase 3223866 554290003121 SSPA2911 Salmonella enterica subsp. enterica serovar Paratyphi A str. alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_002143752.1 3223150 R 554290 CDS YP_002143753.1 197364116 complement(3226258..3227205) 1 NC_011147.1 similar to Salmonella typhi CT18 possible carbohydrate kinase; carbohydrate kinase 3227205 554290003123 SSPA2912 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbohydrate kinase YP_002143753.1 3226258 R 554290 CDS YP_002143754.1 197364117 complement(3227216..3228049) 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 3228049 554290003124 SSPA2913 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143754.1 3227216 R 554290 CDS YP_002143755.1 197364118 3228383..3229237 1 NC_011147.1 'catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway'; tagatose-bisphosphate aldolase 3229237 gatY 554290003125 gatY Salmonella enterica subsp. enterica serovar Paratyphi A str. tagatose-bisphosphate aldolase YP_002143755.1 3228383 D 554290 CDS YP_002143756.1 197364119 3229248..3230162 1 NC_011147.1 similar to Salmonella typhi CT18 possible carbohydrate kinase; carbohydrate kinase 3230162 554290003126 SSPA2915 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbohydrate kinase YP_002143756.1 3229248 D 554290 CDS YP_002143757.1 197364120 3230189..3231616 1 NC_011147.1 'similar to Salmonella typhi CT18 PTS system, sugar phosphotransferase enzyme IIBC component'; PTS system sugar phosphotransferase subunit IIBC 3231616 554290003127 SSPA2916 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system sugar phosphotransferase subunit IIBC YP_002143757.1 3230189 D 554290 CDS YP_002143758.1 197364121 3231603..3232409 1 NC_011147.1 similar to Salmonella typhi CT18 PTS-transport family phosphoryl transfer protein; PTS-transport family phosphoryl transfer protein 3232409 554290003128 SSPA2917 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS-transport family phosphoryl transfer protein YP_002143758.1 3231603 D 554290 CDS YP_002143759.1 197364122 3232607..3233878 1 NC_011147.1 similar to Salmonella typhimurium tagatose 6-phosphate kinase 1; tagatose 6-phosphate kinase 1 3233878 554290003129 SSPA2918 Salmonella enterica subsp. enterica serovar Paratyphi A str. tagatose 6-phosphate kinase 1 YP_002143759.1 3232607 D 554290 CDS YP_002143760.1 197364123 3233893..3234357 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system galactitol-specific transporter subunit IIA 3234357 554290003130 SSPA2919 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system galactitol-specific transporter subunit IIA YP_002143760.1 3233893 D 554290 CDS YP_002143761.1 197364124 3234388..3234672 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system galactitol-specific transporter subunit IIB 3234672 554290003131 SSPA2920 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system galactitol-specific transporter subunit IIB YP_002143761.1 3234388 D 554290 CDS YP_002143762.1 197364125 3234676..3236049 1 NC_011147.1 'similar to Salmonella typhi CT18 PTS system,galactitol-specific IIC component'; PTS system galactitol-specific transporter subunit IIC 3236049 554290003132 SSPA2921 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system galactitol-specific transporter subunit IIC YP_002143762.1 3234676 D 554290 CDS YP_002143763.1 197364126 3236093..3237136 1 NC_011147.1 Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; galactitol-1-phosphate dehydrogenase 3237136 554290003133 SSPA2922 Salmonella enterica subsp. enterica serovar Paratyphi A str. galactitol-1-phosphate dehydrogenase YP_002143763.1 3236093 D 554290 CDS YP_002143764.1 197364127 3237247..3238020 1 NC_011147.1 similar to Salmonella typhi CT18 galactitol utilization operon repressor; galactitol utilization operon repressor 3238020 554290003134 SSPA2923 Salmonella enterica subsp. enterica serovar Paratyphi A str. galactitol utilization operon repressor YP_002143764.1 3237247 D 554290 CDS YP_002143765.1 197364128 complement(3238178..3239041) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3239041 554290003135 SSPA2924 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143765.1 3238178 R 554290 CDS YP_002143766.1 197364129 3239105..3241156 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3241156 554290003136 SSPA2925 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143766.1 3239105 D 554290 CDS YP_002143767.1 197364130 3241114..3241509 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3241509 554290003137 SSPA2926 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143767.1 3241114 D 554290 CDS YP_002143768.1 197364131 3241531..3242121 1 NC_011147.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 3242121 554290003138 SSPA2927 Salmonella enterica subsp. enterica serovar Paratyphi A str. DnaA initiator-associating protein DiaA YP_002143768.1 3241531 D 554290 CDS YP_002143769.1 197364132 3242131..3242706 1 NC_011147.1 similar to Salmonella typhi CT18 possible lipoprotein; hypothetical protein 3242706 554290003139 SSPA2928 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143769.1 3242131 D 554290 CDS YP_002143770.1 197364133 complement(3242773..3243408) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3243408 554290003140 SSPA2929 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143770.1 3242773 R 554290 CDS YP_002143771.1 197364134 3243539..3244057 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3244057 554290003141 SSPA2930 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143771.1 3243539 D 554290 CDS YP_002143772.1 197364135 complement(3244037..3244480) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3244480 554290003142 SSPA2931 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143772.1 3244037 R 554290 CDS YP_002143773.1 197364136 3244518..3244835 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; GIY-YIG nuclease superfamily protein 3244835 554290003143 SSPA2932 Salmonella enterica subsp. enterica serovar Paratyphi A str. GIY-YIG nuclease superfamily protein YP_002143773.1 3244518 D 554290 CDS YP_002143774.1 197364137 complement(3244822..3245325) 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 3245325 554290003144 SSPA2933 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002143774.1 3244822 R 554290 CDS YP_002143775.1 197364138 complement(3245319..3245843) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3245843 554290003145 SSPA2934 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143775.1 3245319 R 554290 CDS YP_002143776.1 197364139 3246060..3247055 1 NC_011147.1 similar to Salmonella typhi CT18 protease; protease 3247055 554290003146 SSPA2935 Salmonella enterica subsp. enterica serovar Paratyphi A str. protease YP_002143776.1 3246060 D 554290 CDS YP_002143777.1 197364140 3247064..3247942 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3247942 554290003147 SSPA2936 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143777.1 3247064 D 554290 CDS YP_002143778.2 449784985 complement(3249217..3250461) 1 NC_011147.1 tryptophan transporter of high affinity; tryptophan permease 3250461 554290003149 SSPA2937 Salmonella enterica subsp. enterica serovar Paratyphi A str. tryptophan permease YP_002143778.2 3249217 R 554290 CDS YP_002143779.1 197364142 complement(3250615..3252504) 1 NC_011147.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 3252504 554290003150 SSPA2938 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase DeaD YP_002143779.1 3250615 R 554290 CDS YP_002143780.1 197364143 complement(3252683..3253567) 1 NC_011147.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 3253567 554290003151 SSPA2939 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein NlpI YP_002143780.1 3252683 R 554290 CDS YP_002143781.1 197364144 complement(3253677..3255812) 1 NC_011147.1 similar to Salmonella typhi CT18 polynucleotide phosphorylase; polynucleotide phosphorylase/polyadenylase 3255812 554290003152 SSPA2940 Salmonella enterica subsp. enterica serovar Paratyphi A str. polynucleotide phosphorylase/polyadenylase YP_002143781.1 3253677 R 554290 CDS YP_002143782.1 197364145 complement(3256054..3256323) 1 NC_011147.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3256323 rpsO 554290003154 rpsO Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S15 YP_002143782.1 3256054 R 554290 CDS YP_002143783.1 197364146 complement(3256474..3257418) 1 NC_011147.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 3257418 truB 554290003155 truB Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA pseudouridine synthase B YP_002143783.1 3256474 R 554290 CDS YP_002143784.1 197364147 complement(3257418..3257819) 1 NC_011147.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3257819 rbfA 554290003156 rbfA Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome-binding factor A YP_002143784.1 3257418 R 554290 CDS YP_002143785.1 197364148 complement(3258040..3260718) 1 NC_011147.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3260718 infB 554290003157 infB Salmonella enterica subsp. enterica serovar Paratyphi A str. translation initiation factor IF-2 YP_002143785.1 3258040 R 554290 CDS YP_002143786.1 197364149 complement(3260743..3262245) 1 NC_011147.1 'modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination'; transcription elongation factor NusA 3262245 nusA 554290003158 nusA Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription elongation factor NusA YP_002143786.1 3260743 R 554290 CDS YP_002143787.1 197364150 complement(3262273..3262695) 1 NC_011147.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 3262695 554290003159 SSPA2946 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143787.1 3262273 R 554290 CDS YP_002143788.2 449784986 3263353..3264696 1 NC_011147.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 3264696 554290003161 SSPA2947 Salmonella enterica subsp. enterica serovar Paratyphi A str. argininosuccinate synthase YP_002143788.2 3263353 D 554290 CDS YP_002143789.1 197364152 complement(3264994..3265326) 1 NC_011147.1 similar to Salmonella typhi CT18 protein-export membrane protein; preprotein translocase subunit SecG 3265326 secG 554290003163 secG Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecG YP_002143789.1 3264994 R 554290 CDS YP_002143790.1 197364153 complement(3265549..3266886) 1 NC_011147.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3266886 glmM 554290003164 glmM Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglucosamine mutase YP_002143790.1 3265549 R 554290 CDS YP_002143791.1 197364154 complement(3266879..3267727) 1 NC_011147.1 'catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate'; dihydropteroate synthase 3267727 folP 554290003165 folP Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydropteroate synthase YP_002143791.1 3266879 R 554290 CDS YP_002143792.1 197364155 complement(3267832..3269766) 1 NC_011147.1 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease 3269766 hflB 554290003166 hflB Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent metalloprotease YP_002143792.1 3267832 R 554290 CDS YP_002143793.1 197364156 complement(3269870..3270496) 1 NC_011147.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 3270496 rrmJ 554290003167 rrmJ Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA methyltransferase J YP_002143793.1 3269870 R 554290 CDS YP_002143794.1 197364157 3270584..3270916 1 NC_011147.1 RNA binding protein found associated to pre-50S subunit of the ribosome; role in ribosome assembly; necessary for optimal growth but not cell viability; RNA-binding protein YhbY 3270916 554290003168 SSPA2953 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA-binding protein YhbY YP_002143794.1 3270584 D 554290 CDS YP_002143795.1 197364158 complement(3271072..3271548) 1 NC_011147.1 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus'; transcription elongation factor GreA 3271548 greA 554290003169 greA Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription elongation factor GreA YP_002143795.1 3271072 R 554290 CDS YP_002143796.1 197364159 3271796..3273229 1 NC_011147.1 'penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'; D-alanyl-D-alanine carboxypeptidase 3273229 554290003170 SSPA2955 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanyl-D-alanine carboxypeptidase YP_002143796.1 3271796 D 554290 CDS YP_002143797.1 197364160 complement(3273360..3274532) 1 NC_011147.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 3274532 obgE 554290003171 obgE Salmonella enterica subsp. enterica serovar Paratyphi A str. GTPase ObgE YP_002143797.1 3273360 R 554290 CDS YP_002143798.1 197364161 complement(3274548..3275513) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3275513 554290003172 SSPA2957 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143798.1 3274548 R 554290 CDS YP_002143799.1 197364162 complement(3275643..3275900) 1 NC_011147.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 3275900 rpmA 554290003173 rpmA Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L27 YP_002143799.1 3275643 R 554290 CDS YP_002143800.1 197364163 complement(3275920..3276231) 1 NC_011147.1 similar to Salmonella typhi CT18 50S ribosomal subunit protein L21; 50S ribosomal protein L21 3276231 rplU 554290003174 rplU Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L21 YP_002143800.1 3275920 R 554290 CDS YP_002143801.1 197364164 3276489..3277460 1 NC_011147.1 similar to Salmonella typhi CT18 octaprenyl-diphosphate synthase; octaprenyl diphosphate synthase 3277460 554290003175 SSPA2960 Salmonella enterica subsp. enterica serovar Paratyphi A str. octaprenyl diphosphate synthase YP_002143801.1 3276489 D 554290 CDS YP_002143802.1 197364165 3277692..3277979 1 NC_011147.1 activator of maltose metabolism genes; DNA-binding transcriptional regulator Nlp 3277979 554290003176 SSPA2961 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator Nlp YP_002143802.1 3277692 D 554290 CDS YP_002143803.1 197364166 complement(3278037..3279296) 1 NC_011147.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3279296 554290003177 SSPA2962 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002143803.1 3278037 R 554290 CDS YP_002143804.1 197364167 complement(3279350..3279643) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3279643 554290003178 SSPA2963 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143804.1 3279350 R 554290 CDS YP_002143805.1 197364168 complement(3279792..3280088) 1 NC_011147.1 similar to Salmonella typhi CT18 possible anti-sigma factor antagonist; anti-sigma factor antagonist 3280088 554290003179 SSPA2964 Salmonella enterica subsp. enterica serovar Paratyphi A str. anti-sigma factor antagonist YP_002143805.1 3279792 R 554290 CDS YP_002143806.1 197364169 complement(3280088..3280723) 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3280723 554290003180 SSPA2965 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143806.1 3280088 R 554290 CDS YP_002143807.1 197364170 complement(3280742..3281293) 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3281293 554290003181 SSPA2966 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143807.1 3280742 R 554290 CDS YP_002143808.1 197364171 complement(3281298..3282080) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3282080 554290003182 SSPA2967 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143808.1 3281298 R 554290 CDS YP_002143809.1 197364172 complement(3282088..3282900) 1 NC_011147.1 ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein 3282900 554290003183 SSPA2968 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002143809.1 3282088 R 554290 CDS YP_002143810.1 197364173 3283155..3284090 1 NC_011147.1 YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter 3284090 554290003184 SSPA2969 Salmonella enterica subsp. enterica serovar Paratyphi A str. calcium/sodium:proton antiporter YP_002143810.1 3283155 D 554290 CDS YP_002143811.1 197364174 3284104..3285090 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; D-arabinose 5-phosphate isomerase 3285090 554290003185 SSPA2970 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-arabinose 5-phosphate isomerase YP_002143811.1 3284104 D 554290 CDS YP_002143812.1 197364175 3285111..3285677 1 NC_011147.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3285677 554290003186 SSPA2971 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002143812.1 3285111 D 554290 CDS YP_002143813.1 197364176 3285674..3286249 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3286249 554290003187 SSPA2972 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143813.1 3285674 D 554290 CDS YP_002143814.2 449784987 3286218..3286772 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3286772 554290003188 SSPA2973 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143814.2 3286218 D 554290 CDS YP_002143815.1 197364178 3286779..3287504 1 NC_011147.1 'similar to Salmonella typhi CT18 probable ABC transport protein, ATP-binding component'; ABC transporter ATP-binding protein 3287504 554290003189 SSPA2974 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002143815.1 3286779 D 554290 CDS YP_002143816.1 197364179 3287552..3288985 1 NC_011147.1 'sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen'; RNA polymerase factor sigma-54 3288985 554290003190 SSPA2975 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA polymerase factor sigma-54 YP_002143816.1 3287552 D 554290 CDS YP_002143817.1 197364180 3289008..3289295 1 NC_011147.1 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein 3289295 554290003191 SSPA2976 Salmonella enterica subsp. enterica serovar Paratyphi A str. sigma(54) modulation protein YP_002143817.1 3289008 D 554290 CDS YP_002143818.1 197364181 3289413..3289904 1 NC_011147.1 similar to Salmonella typhi CT18 nitrogen regulatory IIA protein; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 3289904 554290003192 SSPA2977 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_002143818.1 3289413 D 554290 CDS YP_002143819.1 197364182 3289950..3290804 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3290804 554290003193 SSPA2978 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143819.1 3289950 D 554290 CDS YP_002143820.1 197364183 3290801..3291073 1 NC_011147.1 similar to Salmonella typhi CT18 phosphocarrier protein (nitrogen related hpr); N-regulated PTS system phosphohistidinoprotein-hexose phosphotransferase Npr 3291073 554290003194 SSPA2979 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-regulated PTS system phosphohistidinoprotein-hexose phosphotransferase Npr YP_002143820.1 3290801 D 554290 CDS YP_002143821.1 197364184 3291318..3291950 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3291950 554290003195 SSPA2980 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143821.1 3291318 D 554290 CDS YP_002143822.1 197364185 complement(3292025..3292753) 1 NC_011147.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 3292753 mtgA 554290003196 mtgA Salmonella enterica subsp. enterica serovar Paratyphi A str. monofunctional biosynthetic peptidoglycan transglycosylase YP_002143822.1 3292025 R 554290 CDS YP_002143823.1 197364186 complement(3292750..3293403) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; isoprenoid biosynthesis protein 3293403 554290003197 SSPA2982 Salmonella enterica subsp. enterica serovar Paratyphi A str. isoprenoid biosynthesis protein YP_002143823.1 3292750 R 554290 CDS YP_002143824.1 197364187 complement(3293630..3295966) 1 NC_011147.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 3295966 554290003199 SSPA2983 Salmonella enterica subsp. enterica serovar Paratyphi A str. aerobic respiration control sensor protein ArcB YP_002143824.1 3293630 R 554290 CDS YP_002143825.1 197364188 complement(3296060..3296989) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3296989 554290003200 SSPA2984 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143825.1 3296060 R 554290 CDS YP_002143826.1 197364189 3297660..3302120 1 NC_011147.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 3302120 gltB 554290003201 gltB Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate synthase subunit alpha YP_002143826.1 3297660 D 554290 CDS YP_002143827.1 197364190 3302130..3303548 1 NC_011147.1 'glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate'; glutamate synthase subunit beta 3303548 gltD 554290003202 gltD Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate synthase subunit beta YP_002143827.1 3302130 D 554290 CDS YP_002143828.1 197364191 3303756..3304859 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3304859 554290003203 SSPA2987 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143828.1 3303756 D 554290 CDS YP_002143829.1 197364192 3304976..3306229 1 NC_011147.1 similar to Salmonella typhi CT18 cytosine permease; cytosine permease 3306229 codB 554290003204 codB Salmonella enterica subsp. enterica serovar Paratyphi A str. cytosine permease YP_002143829.1 3304976 D 554290 CDS YP_002143830.1 197364193 3306216..3307496 1 NC_011147.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 3307496 554290003205 SSPA2989 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytosine deaminase YP_002143830.1 3306216 D 554290 CDS YP_002143831.1 197364194 complement(3307578..3308045) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3308045 554290003206 SSPA2990 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143831.1 3307578 R 554290 CDS YP_002143832.1 197364195 complement(3308042..3308917) 1 NC_011147.1 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase 3308917 554290003207 SSPA2991 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmannosamine kinase YP_002143832.1 3308042 R 554290 CDS YP_002143833.1 197364196 complement(3308914..3309603) 1 NC_011147.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 3309603 554290003208 SSPA2992 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmannosamine-6-phosphate 2-epimerase YP_002143833.1 3308914 R 554290 CDS YP_002143834.1 197364197 complement(3309650..3311140) 1 NC_011147.1 similar to Salmonella typhi CT18 sialic acid transporter; sialic acid transporter 3311140 554290003209 SSPA2993 Salmonella enterica subsp. enterica serovar Paratyphi A str. sialic acid transporter YP_002143834.1 3309650 R 554290 CDS YP_002143835.1 197364198 complement(3311256..3312149) 1 NC_011147.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase 3312149 554290003210 SSPA2994 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylneuraminate lyase YP_002143835.1 3311256 R 554290 CDS YP_002143836.1 197364199 complement(3312284..3313075) 1 NC_011147.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR 3313075 554290003211 SSPA2995 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator NanR YP_002143836.1 3312284 R 554290 CDS YP_002143837.1 197364200 complement(3313184..3313684) 1 NC_011147.1 similar to Salmonella typhi CT18 stringent starvation protein B; ClpXP protease specificity-enhancing factor 3313684 554290003212 SSPA2996 Salmonella enterica subsp. enterica serovar Paratyphi A str. ClpXP protease specificity-enhancing factor YP_002143837.1 3313184 R 554290 CDS YP_002143838.1 197364201 complement(3313690..3314328) 1 NC_011147.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 3314328 sspA 554290003213 sspA Salmonella enterica subsp. enterica serovar Paratyphi A str. stringent starvation protein A YP_002143838.1 3313690 R 554290 CDS YP_002143839.1 197364202 complement(3314641..3315033) 1 NC_011147.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 3315033 rpsI 554290003214 rpsI Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S9 YP_002143839.1 3314641 R 554290 CDS YP_002143840.1 197364203 complement(3315049..3315477) 1 NC_011147.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 3315477 rplM 554290003215 rplM Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L13 YP_002143840.1 3315049 R 554290 CDS YP_002143841.1 197364204 complement(3315778..3316902) 1 NC_011147.1 similar to Salmonella typhi CT18 ATP/GTP-binding protein; ATP/GTP-binding protein 3316902 554290003216 SSPA3000 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP/GTP-binding protein YP_002143841.1 3315778 R 554290 CDS YP_002143842.1 197364205 3317089..3317493 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; cytochrome d ubiquinol oxidase subunit III 3317493 554290003217 SSPA3001 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome d ubiquinol oxidase subunit III YP_002143842.1 3317089 D 554290 CDS YP_002143843.1 197364206 3317650..3319017 1 NC_011147.1 similar to Salmonella typhi CT18 serine protease; serine endoprotease 3319017 554290003218 SSPA3002 Salmonella enterica subsp. enterica serovar Paratyphi A str. serine endoprotease YP_002143843.1 3317650 D 554290 CDS YP_002143844.1 197364207 3319110..3320180 1 NC_011147.1 similar to Salmonella typhi CT18 serine protease; serine endoprotease 3320180 554290003219 SSPA3003 Salmonella enterica subsp. enterica serovar Paratyphi A str. serine endoprotease YP_002143844.1 3319110 D 554290 CDS YP_002143845.1 197364208 complement(3320214..3320945) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3320945 554290003220 SSPA3004 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002143845.1 3320214 R 554290 CDS YP_002143846.1 197364209 complement(3320965..3322248) 1 NC_011147.1 similar to Salmonella typhi CT18 oxaloacetate decarboxylase beta chain; oxaloacetate decarboxylase subunit beta 3322248 554290003221 SSPA3005 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxaloacetate decarboxylase subunit beta YP_002143846.1 3320965 R 554290 CDS YP_002143847.1 197364210 complement(3322261..3324027) 1 NC_011147.1 catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 3324027 554290003222 SSPA3006 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxaloacetate decarboxylase YP_002143847.1 3322261 R 554290 CDS YP_002143848.1 197364211 complement(3324043..3324285) 1 NC_011147.1 catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide; oxaloacetate decarboxylase subunit gamma 3324285 oadG 554290003223 oadG Salmonella enterica subsp. enterica serovar Paratyphi A str. oxaloacetate decarboxylase subunit gamma YP_002143848.1 3324043 R 554290 CDS YP_002143849.1 197364212 complement(3324441..3325058) 1 NC_011147.1 Involved in the tartrate degradation pathway; L(+)-tartrate dehydratase subunit beta 3325058 554290003224 SSPA3008 Salmonella enterica subsp. enterica serovar Paratyphi A str. L(+)-tartrate dehydratase subunit beta YP_002143849.1 3324441 R 554290 CDS YP_002143850.1 197364213 complement(3325058..3325957) 1 NC_011147.1 Involved in the tartrate degradation pathway; tartrate dehydratase subunit alpha 3325957 554290003225 SSPA3009 Salmonella enterica subsp. enterica serovar Paratyphi A str. tartrate dehydratase subunit alpha YP_002143850.1 3325058 R 554290 CDS YP_002143851.2 449784988 complement(3327469..3328134) 1 NC_011147.1 similar to Salmonella typhi CT18 possible transcriptional regulator; transcriptional regulator 3328134 554290003227 SSPA3010 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002143851.2 3327469 R 554290 CDS YP_002143852.1 197364215 complement(3328121..3328750) 1 NC_011147.1 similar to Salmonella typhi CT18 possible GntR-family transcriptional regulator; GntR family transcriptional regulator 3328750 554290003228 SSPA3011 Salmonella enterica subsp. enterica serovar Paratyphi A str. GntR family transcriptional regulator YP_002143852.1 3328121 R 554290 CDS YP_002143853.1 197364216 complement(3328870..3329808) 1 NC_011147.1 oxidizes malate to oxaloacetate; malate dehydrogenase 3329808 554290003229 SSPA3012 Salmonella enterica subsp. enterica serovar Paratyphi A str. malate dehydrogenase YP_002143853.1 3328870 R 554290 CDS YP_002143854.1 197364217 3330222..3330692 1 NC_011147.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 3330692 554290003230 SSPA3013 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine repressor YP_002143854.1 3330222 D 554290 CDS YP_002143855.1 197364218 3331057..3331320 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3331320 554290003231 SSPA3014 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143855.1 3331057 D 554290 CDS YP_002143856.1 197364219 3331424..3331690 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3331690 554290003232 SSPA3015 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143856.1 3331424 D 554290 CDS YP_002143857.1 197364220 complement(3331750..3332022) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3332022 554290003233 SSPA3016 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143857.1 3331750 R 554290 CDS YP_002143858.1 197364221 complement(3332194..3334161) 1 NC_011147.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 3334161 554290003234 SSPA3017 Salmonella enterica subsp. enterica serovar Paratyphi A str. p-hydroxybenzoic acid efflux subunit AaeB YP_002143858.1 3332194 R 554290 CDS YP_002143859.1 197364222 complement(3334167..3335099) 1 NC_011147.1 'with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate'; p-hydroxybenzoic acid efflux subunit AaeA 3335099 554290003235 SSPA3018 Salmonella enterica subsp. enterica serovar Paratyphi A str. p-hydroxybenzoic acid efflux subunit AaeA YP_002143859.1 3334167 R 554290 CDS YP_002143860.1 197364223 complement(3335107..3335310) 1 NC_011147.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 3335310 554290003236 SSPA3019 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143860.1 3335107 R 554290 CDS YP_002143861.1 197364224 3335492..3336421 1 NC_011147.1 similar to Salmonella typhi CT18 probable LysR-family transcriptional regulator; DNA-binding transcriptional regulator 3336421 554290003237 SSPA3020 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002143861.1 3335492 D 554290 CDS YP_002143862.1 197364225 complement(3336544..3337989) 1 NC_011147.1 'responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA'; protease TldD 3337989 tldD 554290003238 tldD Salmonella enterica subsp. enterica serovar Paratyphi A str. protease TldD YP_002143862.1 3336544 R 554290 CDS YP_002143863.2 449784989 complement(3338134..3341934) 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3341934 554290003239 SSPA3022 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143863.2 3338134 R 554290 CDS YP_002143864.1 197364227 complement(3342045..3343514) 1 NC_011147.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 3343514 554290003240 SSPA3023 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease G YP_002143864.1 3342045 R 554290 CDS YP_002143865.1 197364228 complement(3343504..3344097) 1 NC_011147.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 3344097 554290003241 SSPA3024 Salmonella enterica subsp. enterica serovar Paratyphi A str. Maf-like protein YP_002143865.1 3343504 R 554290 CDS YP_002143866.1 197364229 complement(3344106..3344597) 1 NC_011147.1 part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 3344597 554290003242 SSPA3025 Salmonella enterica subsp. enterica serovar Paratyphi A str. rod shape-determining protein MreD YP_002143866.1 3344106 R 554290 CDS YP_002143867.1 197364230 complement(3344597..3345649) 1 NC_011147.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 3345649 554290003243 SSPA3026 Salmonella enterica subsp. enterica serovar Paratyphi A str. rod shape-determining protein MreC YP_002143867.1 3344597 R 554290 CDS YP_002143868.1 197364231 complement(3345714..3346757) 1 NC_011147.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 3346757 554290003244 SSPA3027 Salmonella enterica subsp. enterica serovar Paratyphi A str. rod shape-determining protein MreB YP_002143868.1 3345714 R 554290 CDS YP_002143869.1 197364232 complement(3347065..3349005) 1 NC_011147.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 3349005 554290003245 SSPA3028 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein CsrD YP_002143869.1 3347065 R 554290 CDS YP_002143870.1 197364233 3349209..3350183 1 NC_011147.1 similar to Salmonella typhi CT18 possible oxidoreductase; oxidoreductase 3350183 554290003246 SSPA3029 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002143870.1 3349209 D 554290 CDS YP_002143871.1 197364234 3350296..3351300 1 NC_011147.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3351300 554290003247 SSPA3030 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfite oxidase subunit YedY YP_002143871.1 3350296 D 554290 CDS YP_002143872.1 197364235 3351301..3351900 1 NC_011147.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 3351900 554290003248 SSPA3031 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfite oxidase subunit YedZ YP_002143872.1 3351301 D 554290 CDS YP_002143873.1 197364236 3352293..3352763 1 NC_011147.1 'composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism'; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3352763 554290003249 SSPA3032 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_002143873.1 3352293 D 554290 CDS YP_002143874.1 197364237 3352774..3354123 1 NC_011147.1 'an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism'; acetyl-CoA carboxylase biotin carboxylase subunit 3354123 554290003250 SSPA3033 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl-CoA carboxylase biotin carboxylase subunit YP_002143874.1 3352774 D 554290 CDS YP_002143875.1 197364238 3354232..3354474 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3354474 554290003251 SSPA3034 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143875.1 3354232 D 554290 CDS YP_002143876.1 197364239 3354464..3355915 1 NC_011147.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 3355915 panF 554290003252 panF Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium/panthothenate symporter YP_002143876.1 3354464 D 554290 CDS YP_002143877.1 197364240 3355927..3356808 1 NC_011147.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 3356808 prmA 554290003253 prmA Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L11 methyltransferase YP_002143877.1 3355927 D 554290 CDS YP_002143878.2 449784990 3357468..3358433 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3358433 554290003254 SSPA3037 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143878.2 3357468 D 554290 CDS YP_002143879.1 197364242 3358459..3358755 1 NC_011147.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 3358755 fis 554290003255 fis Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein Fis YP_002143879.1 3358459 D 554290 CDS YP_002143880.1 197364243 3359780..3359971 1 NC_011147.1 similar to Salmonella typhimurium periplasmic protein; hypothetical protein 3359971 554290003257 SSPA3039 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143880.1 3359780 D 554290 CDS YP_002143881.1 197364244 3360122..3362221 1 NC_011147.1 similar to Salmonella typhimurium membrane domain involved in signal transduction; Diguanylate cyclase/phosphodiesterase domain 1; Diguanylate cyclase/phosphodiesterase domain 2; hypothetical protein 3362221 554290003258 SSPA3040 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143881.1 3360122 D 554290 CDS YP_002143882.1 197364245 complement(3362224..3362886) 1 NC_011147.1 similar to Salmonella typhimurium transcriptional repressor for envCD (acrEF) (TetR/AcrR family); DNA-binding transcriptional regulator EnvR 3362886 554290003259 SSPA3041 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator EnvR YP_002143882.1 3362224 R 554290 CDS YP_002143883.1 197364246 3363300..3364457 1 NC_011147.1 similar to Salmonella typhimurium transmembrane protein affecting septum formation and cell membrane permeability; septum formation/cell membrane permeability transmembrane protein 3364457 554290003260 SSPA3042 Salmonella enterica subsp. enterica serovar Paratyphi A str. septum formation/cell membrane permeability transmembrane protein YP_002143883.1 3363300 D 554290 CDS YP_002143884.1 197364247 3364469..3367582 1 NC_011147.1 'similar to Salmonella typhimurium RND family,multidrug transport protein, acriflavin resistance protein F'; acriflavin resistance protein F 3367582 554290003261 SSPA3043 Salmonella enterica subsp. enterica serovar Paratyphi A str. acriflavin resistance protein F YP_002143884.1 3364469 D 554290 CDS YP_002143885.1 197364248 3367819..3368040 1 NC_011147.1 similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein 3368040 554290003262 SSPA3044 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002143885.1 3367819 D 554290 CDS YP_002143886.1 197364249 3374545..3375099 1 NC_011147.1 similar to Salmonella typhi CT18 transferase; transferase 3375099 554290003269 SSPA3045 Salmonella enterica subsp. enterica serovar Paratyphi A str. transferase YP_002143886.1 3374545 D 554290 CDS YP_002143887.1 197364250 complement(3375075..3375332) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3375332 554290003270 SSPA3046 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143887.1 3375075 R 554290 CDS YP_002143888.1 197364251 complement(3375329..3376147) 1 NC_011147.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 3376147 aroE 554290003271 aroE Salmonella enterica subsp. enterica serovar Paratyphi A str. shikimate 5-dehydrogenase YP_002143888.1 3375329 R 554290 CDS YP_002143889.1 197364252 complement(3376152..3376724) 1 NC_011147.1 RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; ribosome maturation factor 3376724 554290003272 SSPA3048 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome maturation factor YP_002143889.1 3376152 R 554290 CDS YP_002143890.1 197364253 complement(3376729..3377271) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3377271 554290003273 SSPA3049 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143890.1 3376729 R 554290 CDS YP_002143891.1 197364254 complement(3377298..3377771) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3377771 554290003274 SSPA3050 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143891.1 3377298 R 554290 CDS YP_002143892.1 197364255 complement(3377743..3378867) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; DNA protecting protein DprA 3378867 554290003275 SSPA3051 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA protecting protein DprA YP_002143892.1 3377743 R 554290 CDS YP_002143893.1 197364256 3378999..3379508 1 NC_011147.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 3379508 def 554290003276 def Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide deformylase YP_002143893.1 3378999 D 554290 CDS YP_002143894.1 197364257 3379524..3380471 1 NC_011147.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 3380471 fmt 554290003277 fmt Salmonella enterica subsp. enterica serovar Paratyphi A str. methionyl-tRNA formyltransferase YP_002143894.1 3379524 D 554290 CDS YP_002143895.1 197364258 3380523..3381812 1 NC_011147.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 3381812 554290003278 SSPA3054 Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S rRNA methyltransferase B YP_002143895.1 3380523 D 554290 CDS YP_002143896.1 197364259 3381834..3383210 1 NC_011147.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 3383210 trkA 554290003279 trkA Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium transporter peripheral membrane protein YP_002143896.1 3381834 D 554290 CDS YP_002143897.1 197364260 3383352..3383765 1 NC_011147.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large conductance mechanosensitive channel protein 3383765 mscL 554290003280 mscL Salmonella enterica subsp. enterica serovar Paratyphi A str. large conductance mechanosensitive channel protein YP_002143897.1 3383352 D 554290 CDS YP_002143898.1 197364261 complement(3384028..3384453) 1 NC_011147.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator 3384453 zntR 554290003281 zntR Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc-responsive transcriptional regulator YP_002143898.1 3384028 R 554290 CDS YP_002143899.1 197364262 complement(3384464..3384832) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3384832 554290003282 SSPA3058 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143899.1 3384464 R 554290 CDS YP_002143900.1 197364263 complement(3384940..3385323) 1 NC_011147.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 3385323 rplQ 554290003283 rplQ Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L17 YP_002143900.1 3384940 R 554290 CDS YP_002143901.1 197364264 complement(3385364..3386353) 1 NC_011147.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 3386353 554290003284 SSPA3060 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-directed RNA polymerase subunit alpha YP_002143901.1 3385364 R 554290 CDS YP_002143902.1 197364265 complement(3386379..3386999) 1 NC_011147.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 3386999 rpsD 554290003285 rpsD Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S4 YP_002143902.1 3386379 R 554290 CDS YP_002143903.1 197364266 complement(3387033..3387365) 1 NC_011147.1 similar to Salmonella typhi CT18 30S ribosomal subunit protein S11; 30S ribosomal protein S11 3387365 554290003286 SSPA3062 Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S11 YP_002143903.1 3387033 R 554290 CDS YP_002143904.1 197364267 complement(3387439..3387795) 1 NC_011147.1 'located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA'; 30S ribosomal protein S13 3387795 rpsM 554290003287 rpsM Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S13 YP_002143904.1 3387439 R 554290 CDS YP_002143905.1 197364268 complement(3387942..3388058) 1 NC_011147.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 3388058 rpmJ 554290003288 rpmJ Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L36 YP_002143905.1 3387942 R 554290 CDS YP_002143906.1 197364269 complement(3388090..3389421) 1 NC_011147.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 3389421 secY 554290003289 secY Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecY YP_002143906.1 3388090 R 554290 CDS YP_002143907.1 197364270 complement(3389429..3389863) 1 NC_011147.1 late assembly protein; 50S ribosomal protein L15 3389863 rplO 554290003290 rplO Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L15 YP_002143907.1 3389429 R 554290 CDS YP_002143908.1 197364271 complement(3389867..3390046) 1 NC_011147.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 3390046 rpmD 554290003291 rpmD Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L30 YP_002143908.1 3389867 R 554290 CDS YP_002143909.1 197364272 complement(3390050..3390553) 1 NC_011147.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 3390553 rpsE 554290003292 rpsE Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S5 YP_002143909.1 3390050 R 554290 CDS YP_002143910.1 197364273 complement(3390568..3390921) 1 NC_011147.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 3390921 rplR 554290003293 rplR Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L18 YP_002143910.1 3390568 R 554290 CDS YP_002143911.1 197364274 complement(3390931..3391464) 1 NC_011147.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 3391464 rplF 554290003294 rplF Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L6 YP_002143911.1 3390931 R 554290 CDS YP_002143912.1 197364275 complement(3391477..3391869) 1 NC_011147.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 3391869 rpsH 554290003295 rpsH Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S8 YP_002143912.1 3391477 R 554290 CDS YP_002143913.1 197364276 complement(3391903..3392208) 1 NC_011147.1 'located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif'; 30S ribosomal protein S14 3392208 rpsN 554290003296 rpsN Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S14 YP_002143913.1 3391903 R 554290 CDS YP_002143914.1 197364277 complement(3392223..3392762) 1 NC_011147.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 3392762 rplE 554290003297 rplE Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L5 YP_002143914.1 3392223 R 554290 CDS YP_002143915.1 197364278 complement(3392777..3393091) 1 NC_011147.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 3393091 rplX 554290003298 rplX Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L24 YP_002143915.1 3392777 R 554290 CDS YP_002143916.1 197364279 complement(3393102..3393473) 1 NC_011147.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 3393473 rplN 554290003299 rplN Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L14 YP_002143916.1 3393102 R 554290 CDS YP_002143917.1 197364280 complement(3393637..3393891) 1 NC_011147.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 3393891 rpsQ 554290003300 rpsQ Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S17 YP_002143917.1 3393637 R 554290 CDS YP_002143918.1 197364281 complement(3393891..3394082) 1 NC_011147.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 3394082 554290003301 SSPA3077 Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L29 YP_002143918.1 3393891 R 554290 CDS YP_002143919.1 197364282 complement(3394082..3394492) 1 NC_011147.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 3394492 rplP 554290003302 rplP Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L16 YP_002143919.1 3394082 R 554290 CDS YP_002143920.1 197364283 complement(3394505..3395206) 1 NC_011147.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 3395206 rpsC 554290003303 rpsC Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S3 YP_002143920.1 3394505 R 554290 CDS YP_002143921.1 197364284 complement(3395224..3395556) 1 NC_011147.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 3395556 rplV 554290003304 rplV Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L22 YP_002143921.1 3395224 R 554290 CDS YP_002143922.1 197364285 complement(3395571..3395849) 1 NC_011147.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 3395849 rpsS 554290003305 rpsS Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S19 YP_002143922.1 3395571 R 554290 CDS YP_002143923.1 197364286 complement(3395866..3396687) 1 NC_011147.1 'one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation'; 50S ribosomal protein L2 3396687 rplB 554290003306 rplB Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L2 YP_002143923.1 3395866 R 554290 CDS YP_002143924.1 197364287 complement(3396705..3397007) 1 NC_011147.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 3397007 rplW 554290003307 rplW Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L23 YP_002143924.1 3396705 R 554290 CDS YP_002143925.1 197364288 complement(3397004..3397609) 1 NC_011147.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 3397609 rplD 554290003308 rplD Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L4 YP_002143925.1 3397004 R 554290 CDS YP_002143926.1 197364289 complement(3397620..3398249) 1 NC_011147.1 'binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin'; 50S ribosomal protein L3 3398249 rplC 554290003309 rplC Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L3 YP_002143926.1 3397620 R 554290 CDS YP_002143927.1 197364290 complement(3398282..3398593) 1 NC_011147.1 similar to Salmonella typhi CT18 30S ribosomal subunit protein S10; 30S ribosomal protein S10 3398593 554290003310 SSPA3086 Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S10 YP_002143927.1 3398282 R 554290 CDS YP_002143928.1 197364291 3398973..3399440 1 NC_011147.1 similar to Salmonella typhi CT18 Type III leader peptidase; type III leader peptidase 3399440 554290003311 SSPA3087 Salmonella enterica subsp. enterica serovar Paratyphi A str. type III leader peptidase YP_002143928.1 3398973 D 554290 CDS YP_002143929.1 197364292 complement(3399437..3399913) 1 NC_011147.1 iron storage protein; bacterioferritin 3399913 554290003312 SSPA3088 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacterioferritin YP_002143929.1 3399437 R 554290 CDS YP_002143930.1 197364293 complement(3399986..3400180) 1 NC_011147.1 similar to Salmonella typhi Ty2 bacterioferritin-associated ferredoxin; bacterioferritin-associated ferredoxin 3400180 554290003313 SSPA3089 Salmonella enterica subsp. enterica serovar Paratyphi A str. bacterioferritin-associated ferredoxin YP_002143930.1 3399986 R 554290 CDS YP_002143931.1 197364294 complement(3400365..3401549) 1 NC_011147.1 'EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu'; elongation factor Tu 3401549 tufA 554290003314 tufA Salmonella enterica subsp. enterica serovar Paratyphi A str. elongation factor Tu YP_002143931.1 3400365 R 554290 CDS YP_002143932.1 197364295 complement(3401621..3403735) 1 NC_011147.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3403735 554290003315 SSPA3091 Salmonella enterica subsp. enterica serovar Paratyphi A str. elongation factor G YP_002143932.1 3401621 R 554290 CDS YP_002143933.1 197364296 complement(3403832..3404302) 1 NC_011147.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 3404302 554290003316 SSPA3092 Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S7 YP_002143933.1 3403832 R 554290 CDS YP_002143934.1 197364297 complement(3404398..3404772) 1 NC_011147.1 'interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance'; 30S ribosomal protein S12 3404772 rpsL 554290003317 rpsL Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S12 YP_002143934.1 3404398 R 554290 CDS YP_002143935.1 197364298 complement(3404898..3405185) 1 NC_011147.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB 3405185 554290003318 SSPA3094 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfur transfer complex subunit TusB YP_002143935.1 3404898 R 554290 CDS YP_002143936.1 197364299 complement(3405193..3405549) 1 NC_011147.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 3405549 554290003319 SSPA3095 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfur relay protein TusC YP_002143936.1 3405193 R 554290 CDS YP_002143937.1 197364300 complement(3405549..3405935) 1 NC_011147.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 3405935 554290003320 SSPA3096 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfur transfer complex subunit TusD YP_002143937.1 3405549 R 554290 CDS YP_002143938.1 197364301 complement(3405935..3406657) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3406657 554290003321 SSPA3097 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143938.1 3405935 R 554290 CDS YP_002143939.1 197364302 complement(3406934..3407752) 1 NC_011147.1 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 3407752 554290003322 SSPA3098 Salmonella enterica subsp. enterica serovar Paratyphi A str. FKBP-type peptidyl-prolyl cis-trans isomerase YP_002143939.1 3406934 R 554290 CDS YP_002143940.1 197364303 3407987..3408190 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3408190 554290003323 SSPA3099 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143940.1 3407987 D 554290 CDS YP_002143941.1 197364304 complement(3408380..3408970) 1 NC_011147.1 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 3408970 554290003324 SSPA3100 Salmonella enterica subsp. enterica serovar Paratyphi A str. FKBP-type peptidyl-prolyl cis-trans isomerase YP_002143941.1 3408380 R 554290 CDS YP_002143942.1 197364305 complement(3409065..3409265) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3409265 554290003325 SSPA3101 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143942.1 3409065 R 554290 CDS YP_002143943.1 197364306 complement(3409276..3411081) 1 NC_011147.1 involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB 3411081 554290003326 SSPA3102 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione-regulated potassium-efflux system protein KefB YP_002143943.1 3409276 R 554290 CDS YP_002143944.1 197364307 complement(3411081..3411632) 1 NC_011147.1 required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG 3411632 554290003327 SSPA3103 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione-regulated potassium-efflux system ancillary protein KefG YP_002143944.1 3411081 R 554290 CDS YP_002143945.1 197364308 3411898..3413805 1 NC_011147.1 similar to Salmonella typhi CT18 probable ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 3413805 554290003328 SSPA3104 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002143945.1 3411898 D 554290 CDS YP_002143946.1 197364309 complement(3414191..3414502) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3414502 554290003330 SSPA3105 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143946.1 3414191 R 554290 CDS YP_002143947.1 197364310 3414691..3415767 1 NC_011147.1 similar to Salmonella typhimurium hydrolase. Alpha/beta-hydrolase fold; hydrolase 3415767 554290003331 SSPA3106 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002143947.1 3414691 D 554290 CDS YP_002143948.1 197364311 3415764..3415982 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3415982 554290003332 SSPA3107 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143948.1 3415764 D 554290 CDS YP_002143949.1 197364312 3416034..3416903 1 NC_011147.1 similar to Salmonella typhi CT18 phosphoribulokinase; phosphoribulokinase 3416903 554290003333 SSPA3108 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribulokinase YP_002143949.1 3416034 D 554290 CDS YP_002143950.1 197364313 complement(3416999..3417403) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3417403 554290003334 SSPA3109 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143950.1 3416999 R 554290 CDS YP_002143951.1 197364314 3417711..3418343 1 NC_011147.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 3418343 554290003335 SSPA3110 Salmonella enterica subsp. enterica serovar Paratyphi A str. cAMP-regulatory protein YP_002143951.1 3417711 D 554290 CDS YP_002143952.1 197364315 3418392..3420479 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3420479 554290003336 SSPA3111 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002143952.1 3418392 D 554290 CDS YP_002143953.1 197364316 complement(3420522..3421739) 1 NC_011147.1 'DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate'; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase 3421739 argD 554290003337 argD Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase YP_002143953.1 3420522 R 554290 CDS YP_002143954.1 197364317 complement(3421825..3422388) 1 NC_011147.1 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 3422388 554290003338 SSPA3113 Salmonella enterica subsp. enterica serovar Paratyphi A str. para-aminobenzoate synthase component II YP_002143954.1 3421825 R 554290 CDS YP_002143955.1 197364318 complement(3422420..3423022) 1 NC_011147.1 similar to Salmonella typhi CT18 cell filamentation protein Fic; cell filamentation protein Fic 3423022 554290003339 SSPA3114 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell filamentation protein Fic YP_002143955.1 3422420 R 554290 CDS YP_002143956.1 197364319 complement(3423012..3423179) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3423179 554290003340 SSPA3115 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143956.1 3423012 R 554290 CDS YP_002143957.1 197364320 complement(3423288..3423860) 1 NC_011147.1 similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl cis-trans isomerase A 3423860 554290003341 SSPA3116 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-prolyl cis-trans isomerase A YP_002143957.1 3423288 R 554290 CDS YP_002143958.1 197364321 3424137..3425318 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3425318 554290003342 SSPA3117 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143958.1 3424137 D 554290 CDS YP_002143959.1 197364322 3425580..3428123 1 NC_011147.1 similar to Salmonella typhi CT18 nitrite reductase large subunit; nitrite reductase large subunit 3428123 554290003343 SSPA3118 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrite reductase large subunit YP_002143959.1 3425580 D 554290 CDS YP_002143960.1 197364323 3428120..3428446 1 NC_011147.1 'involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations'; nitrite reductase small subunit 3428446 nirD 554290003344 nirD Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrite reductase small subunit YP_002143960.1 3428120 D 554290 CDS YP_002143961.1 197364324 3428642..3429451 1 NC_011147.1 member of the FNT family of formate and nitrite transporters; nitrite transporter NirC 3429451 554290003345 SSPA3120 Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrite transporter NirC YP_002143961.1 3428642 D 554290 CDS YP_002143962.1 197364325 3429463..3430836 1 NC_011147.1 'multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin'; siroheme synthase 3430836 cysG 554290003346 cysG Salmonella enterica subsp. enterica serovar Paratyphi A str. siroheme synthase YP_002143962.1 3429463 D 554290 CDS YP_002143963.1 197364326 3431163..3437129 1 NC_011147.1 'Contains C-terminal autotransporter domain. N-terminal domain conserved in Typhimurium LT2 sequence,but central domains differ extensively. Part of central domain has high homology with E. coli gene EntS/YbdA (P336666). Typhi ortholog has frameshift mutation resulting in inactivation of autotransporter domain,however sequence appears to be intact in Paratyphi A.'; surface-exposed virulence protein 3437129 bigA 554290003347 bigA Salmonella enterica subsp. enterica serovar Paratyphi A str. surface-exposed virulence protein YP_002143963.1 3431163 D 554290 CDS YP_002143964.1 197364327 complement(3437637..3438641) 1 NC_011147.1 'catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; tryptophanyl-tRNA synthetase 3438641 554290003349 SSPA3122 Salmonella enterica subsp. enterica serovar Paratyphi A str. tryptophanyl-tRNA synthetase YP_002143964.1 3437637 R 554290 CDS YP_002143965.1 197364328 complement(3438634..3439392) 1 NC_011147.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 3439392 554290003350 SSPA3123 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycolate phosphatase YP_002143965.1 3438634 R 554290 CDS YP_002143966.1 197364329 complement(3439385..3440062) 1 NC_011147.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 3440062 554290003351 SSPA3124 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribulose-phosphate 3-epimerase YP_002143966.1 3439385 R 554290 CDS YP_002143967.1 197364330 complement(3440080..3440916) 1 NC_011147.1 similar to Salmonella typhi CT18 DNA adenine methylase; DNA adenine methylase 3440916 554290003352 SSPA3125 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA adenine methylase YP_002143967.1 3440080 R 554290 CDS YP_002143968.1 197364331 complement(3441097..3442371) 1 NC_011147.1 similar to Salmonella typhi CT18 DamX protein; hypothetical protein 3442371 554290003353 SSPA3126 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143968.1 3441097 R 554290 CDS YP_002143969.1 197364332 complement(3442469..3443557) 1 NC_011147.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 3443557 aroB 554290003354 aroB Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-dehydroquinate synthase YP_002143969.1 3442469 R 554290 CDS YP_002143970.1 197364333 complement(3443614..3444135) 1 NC_011147.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 3444135 aroK 554290003355 aroK Salmonella enterica subsp. enterica serovar Paratyphi A str. shikimate kinase I YP_002143970.1 3443614 R 554290 CDS YP_002143971.1 197364334 complement(3444600..3445838) 1 NC_011147.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; outer membrane porin HofQ 3445838 hofQ 554290003356 hofQ Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane porin HofQ YP_002143971.1 3444600 R 554290 CDS YP_002143972.1 197364335 complement(3445753..3446154) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3446154 554290003357 SSPA3130 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143972.1 3445753 R 554290 CDS YP_002143973.1 197364336 complement(3446144..3446617) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3446617 554290003358 SSPA3131 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143973.1 3446144 R 554290 CDS YP_002143974.1 197364337 complement(3446601..3447140) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3447140 554290003359 SSPA3132 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143974.1 3446601 R 554290 CDS YP_002143975.1 197364338 3448015..3450591 1 NC_011147.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 3450591 mrcA 554290003361 mrcA Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidoglycan synthetase YP_002143975.1 3448015 D 554290 CDS YP_002143976.1 197364339 complement(3450687..3451283) 1 NC_011147.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 3451283 nudE 554290003362 nudE Salmonella enterica subsp. enterica serovar Paratyphi A str. ADP-ribose diphosphatase NudE YP_002143976.1 3450687 R 554290 CDS YP_002143977.1 197364340 3451573..3453705 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3453705 554290003363 SSPA3135 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143977.1 3451573 D 554290 CDS YP_002143978.1 197364341 3453728..3454438 1 NC_011147.1 similar to Salmonella typhi CT18 hydrolase; hydrolase 3454438 554290003364 SSPA3136 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002143978.1 3453728 D 554290 CDS YP_002143979.1 197364342 3454449..3454850 1 NC_011147.1 similar to Salmonella typhi Ty2 heat shock protein; ribosome-associated heat shock protein Hsp15 3454850 554290003365 SSPA3137 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome-associated heat shock protein Hsp15 YP_002143979.1 3454449 D 554290 CDS YP_002143980.1 197364343 3454875..3455753 1 NC_011147.1 'becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers'; Hsp33-like chaperonin 3455753 hslO 554290003366 hslO Salmonella enterica subsp. enterica serovar Paratyphi A str. Hsp33-like chaperonin YP_002143980.1 3454875 D 554290 CDS YP_002143981.1 197364344 complement(3455864..3457573) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3457573 554290003367 SSPA3139 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143981.1 3455864 R 554290 CDS YP_002143982.1 197364345 3457953..3459572 1 NC_011147.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 3459572 554290003368 SSPA3140 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoenolpyruvate carboxykinase YP_002143982.1 3457953 D 554290 CDS YP_002143983.2 449784991 complement(3459647..3460999) 1 NC_011147.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 3460999 envZ 554290003369 envZ Salmonella enterica subsp. enterica serovar Paratyphi A str. osmolarity sensor protein YP_002143983.2 3459647 R 554290 CDS YP_002143984.1 197364347 complement(3460996..3461715) 1 NC_011147.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 3461715 ompR 554290003370 ompR Salmonella enterica subsp. enterica serovar Paratyphi A str. osmolarity response regulator YP_002143984.1 3460996 R 554290 CDS YP_002143985.1 197364348 3461941..3462414 1 NC_011147.1 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus'; transcription elongation factor GreB 3462414 greB 554290003371 greB Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription elongation factor GreB YP_002143985.1 3461941 D 554290 CDS YP_002143986.1 197364349 3462513..3464843 1 NC_011147.1 similar to Salmonella typhi CT18 transcription accessory protein; transcription accessory protein 3464843 554290003372 SSPA3144 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription accessory protein YP_002143986.1 3462513 D 554290 CDS YP_002143987.1 197364350 3465280..3465507 1 NC_011147.1 similar to Salmonella typhi CT18 ferrous iron transport protein; ferrous iron transport protein A 3465507 feoA 554290003373 feoA Salmonella enterica subsp. enterica serovar Paratyphi A str. ferrous iron transport protein A YP_002143987.1 3465280 D 554290 CDS YP_002143988.1 197364351 3465526..3467844 1 NC_011147.1 cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B 3467844 feoB 554290003374 feoB Salmonella enterica subsp. enterica serovar Paratyphi A str. ferrous iron transport protein B YP_002143988.1 3465526 D 554290 CDS YP_002143989.1 197364352 3467857..3468093 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3468093 554290003375 SSPA3147 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143989.1 3467857 D 554290 CDS YP_002143990.1 197364353 3468328..3469254 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3469254 554290003376 SSPA3148 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002143990.1 3468328 D 554290 CDS YP_002143991.1 197364354 complement(3469290..3470060) 1 NC_011147.1 Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis; carboxylesterase BioH 3470060 554290003377 SSPA3149 Salmonella enterica subsp. enterica serovar Paratyphi A str. carboxylesterase BioH YP_002143991.1 3469290 R 554290 CDS YP_002143992.1 197364355 3470098..3470781 1 NC_011147.1 involved in high-affinity gluconate transport; gluconate periplasmic binding protein 3470781 554290003378 SSPA3150 Salmonella enterica subsp. enterica serovar Paratyphi A str. gluconate periplasmic binding protein YP_002143992.1 3470098 D 554290 CDS YP_002143993.1 197364356 3470840..3471415 1 NC_011147.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 3471415 554290003379 SSPA3151 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA uptake protein YP_002143993.1 3470840 D 554290 CDS YP_002143994.1 197364357 3471840..3473108 1 NC_011147.1 similar to Salmonella typhi CT18 high-affinity gluconate transporter; high-affinity gluconate transporter 3473108 554290003380 SSPA3152 Salmonella enterica subsp. enterica serovar Paratyphi A str. high-affinity gluconate transporter YP_002143994.1 3471840 D 554290 CDS YP_002143995.1 197364358 complement(3473227..3475305) 1 NC_011147.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 3475305 malQ 554290003381 malQ Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-alpha-glucanotransferase YP_002143995.1 3473227 R 554290 CDS YP_002143996.1 197364359 complement(3475315..3477708) 1 NC_011147.1 similar to Salmonella typhi CT18 maltodextrin phosphorylase; maltodextrin phosphorylase 3477708 554290003382 SSPA3154 Salmonella enterica subsp. enterica serovar Paratyphi A str. maltodextrin phosphorylase YP_002143996.1 3475315 R 554290 CDS YP_002143997.1 197364360 3478302..3481007 1 NC_011147.1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 3481007 554290003383 SSPA3155 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator MalT YP_002143997.1 3478302 D 554290 CDS YP_002143998.1 197364361 complement(3481081..3481839) 1 NC_011147.1 'represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism'; DNA-binding transcriptional repressor GlpR 3481839 554290003384 SSPA3156 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor GlpR YP_002143998.1 3481081 R 554290 CDS YP_002143999.1 197364362 complement(3481932..3482762) 1 NC_011147.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 3482762 554290003385 SSPA3157 Salmonella enterica subsp. enterica serovar Paratyphi A str. intramembrane serine protease GlpG YP_002143999.1 3481932 R 554290 CDS YP_002144000.1 197364363 complement(3482838..3483164) 1 NC_011147.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase 3483164 glpE 554290003386 glpE Salmonella enterica subsp. enterica serovar Paratyphi A str. thiosulfate sulfurtransferase YP_002144000.1 3482838 R 554290 CDS YP_002144001.1 197364364 3483363..3484871 1 NC_011147.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3484871 glpD 554290003387 glpD Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate dehydrogenase YP_002144001.1 3483363 D 554290 CDS YP_002144002.1 197364365 complement(3484963..3487410) 1 NC_011147.1 similar to Salmonella typhi CT18 glycogen phosphorylase; glycogen phosphorylase 3487410 554290003388 SSPA3160 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycogen phosphorylase YP_002144002.1 3484963 R 554290 CDS YP_002144003.1 197364366 complement(3487430..3488863) 1 NC_011147.1 'catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose'; glycogen synthase 3488863 glgA 554290003389 glgA Salmonella enterica subsp. enterica serovar Paratyphi A str. glycogen synthase YP_002144003.1 3487430 R 554290 CDS YP_002144004.1 197364367 complement(3488863..3490158) 1 NC_011147.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 3490158 glgC 554290003390 glgC Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose-1-phosphate adenylyltransferase YP_002144004.1 3488863 R 554290 CDS YP_002144005.1 197364368 complement(3490173..3492149) 1 NC_011147.1 'catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen'; glycogen debranching protein 3492149 554290003391 SSPA3163 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycogen debranching protein YP_002144005.1 3490173 R 554290 CDS YP_002144006.1 197364369 complement(3492146..3494332) 1 NC_011147.1 'catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain'; glycogen branching protein 3494332 554290003392 SSPA3164 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycogen branching protein YP_002144006.1 3492146 R 554290 CDS YP_002144007.1 197364370 complement(3494710..3495816) 1 NC_011147.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 3495816 554290003393 SSPA3165 Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate-semialdehyde dehydrogenase YP_002144007.1 3494710 R 554290 CDS YP_002144008.1 197364371 complement(3496256..3496714) 1 NC_011147.1 similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase 3496714 554290003394 SSPA3166 Salmonella enterica subsp. enterica serovar Paratyphi A str. insertion sequence element IS200 transposase YP_002144008.1 3496256 R 554290 CDS YP_002144009.1 197364372 complement(3496954..3498294) 1 NC_011147.1 similar to Salmonella typhi CT18 low-affinity gluconate transporter; low affinity gluconate transporter 3498294 554290003395 SSPA3167 Salmonella enterica subsp. enterica serovar Paratyphi A str. low affinity gluconate transporter YP_002144009.1 3496954 R 554290 CDS YP_002144010.1 197364373 complement(3498291..3498824) 1 NC_011147.1 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase 3498824 gntK 554290003396 gntK Salmonella enterica subsp. enterica serovar Paratyphi A str. gluconate kinase YP_002144010.1 3498291 R 554290 CDS YP_002144011.1 197364374 complement(3498963..3499958) 1 NC_011147.1 similar to Salmonella typhi CT18 gluconate utilization operon repressor; gluconate utilization operon repressor 3499958 554290003397 SSPA3169 Salmonella enterica subsp. enterica serovar Paratyphi A str. gluconate utilization operon repressor YP_002144011.1 3498963 R 554290 CDS YP_002144012.1 197364375 complement(3500088..3500783) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3500783 554290003398 SSPA3170 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144012.1 3500088 R 554290 CDS YP_002144013.1 197364376 3502412..3502900 1 NC_011147.1 YhhY; regulated by the fur regulator; unknown function; acetyltransferase YhhY 3502900 554290003401 SSPA3171 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YhhY YP_002144013.1 3502412 D 554290 CDS YP_002144014.1 197364377 3503165..3504379 1 NC_011147.1 similar to Salmonella typhi CT18 ribokinase; ribokinase 3504379 554290003402 SSPA3172 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribokinase YP_002144014.1 3503165 D 554290 CDS YP_002144015.1 197364378 3504395..3505156 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3505156 554290003403 SSPA3173 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144015.1 3504395 D 554290 CDS YP_002144016.1 197364379 3505210..3506181 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3506181 554290003404 SSPA3174 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144016.1 3505210 D 554290 CDS YP_002144017.1 197364380 3506178..3507212 1 NC_011147.1 similar to Salmonella typhi CT18 puative phophotriesterase; phophotriesterase 3507212 554290003405 SSPA3175 Salmonella enterica subsp. enterica serovar Paratyphi A str. phophotriesterase YP_002144017.1 3506178 D 554290 CDS YP_002144018.1 197364381 complement(3507257..3508999) 1 NC_011147.1 periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides; gamma-glutamyltranspeptidase 3508999 ggt 554290003406 ggt Salmonella enterica subsp. enterica serovar Paratyphi A str. gamma-glutamyltranspeptidase YP_002144018.1 3507257 R 554290 CDS YP_002144019.1 197364382 3509125..3509541 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3509541 554290003407 SSPA3177 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144019.1 3509125 D 554290 CDS YP_002144020.1 197364383 complement(3509538..3510278) 1 NC_011147.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 3510278 ugpQ 554290003408 ugpQ Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerophosphodiester phosphodiesterase YP_002144020.1 3509538 R 554290 CDS YP_002144021.1 197364384 complement(3510275..3511345) 1 NC_011147.1 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 3511345 ugpC 554290003409 ugpC Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate transporter ATP-binding subunit YP_002144021.1 3510275 R 554290 CDS YP_002144022.1 197364385 complement(3511348..3512193) 1 NC_011147.1 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 3512193 554290003410 SSPA3180 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate transporter membrane protein YP_002144022.1 3511348 R 554290 CDS YP_002144023.1 197364386 complement(3512190..3513077) 1 NC_011147.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 3513077 554290003411 SSPA3181 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate transporter permease YP_002144023.1 3512190 R 554290 CDS YP_002144024.1 197364387 complement(3513182..3514498) 1 NC_011147.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein 3514498 554290003412 SSPA3182 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate transporter periplasmic binding protein YP_002144024.1 3513182 R 554290 CDS YP_002144025.1 197364388 complement(3514731..3515009) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3515009 554290003413 SSPA3183 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144025.1 3514731 R 554290 CDS YP_002144026.1 197364389 complement(3515173..3515886) 1 NC_011147.1 'with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine'; leucine/isoleucine/valine transporter ATP-binding subunit 3515886 livF 554290003414 livF Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine/isoleucine/valine transporter ATP-binding subunit YP_002144026.1 3515173 R 554290 CDS YP_002144027.1 197364390 complement(3515888..3516655) 1 NC_011147.1 'Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine'; leucine/isoleucine/valine transporter ATP-binding subunit 3516655 livG 554290003415 livG Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine/isoleucine/valine transporter ATP-binding subunit YP_002144027.1 3515888 R 554290 CDS YP_002144028.1 197364391 complement(3516652..3517917) 1 NC_011147.1 'Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine'; leucine/isoleucine/valine transporter permease subunit 3517917 livM 554290003416 livM Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine/isoleucine/valine transporter permease subunit YP_002144028.1 3516652 R 554290 CDS YP_002144029.1 197364392 complement(3517914..3518840) 1 NC_011147.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease LivH 3518840 554290003417 SSPA3187 Salmonella enterica subsp. enterica serovar Paratyphi A str. branched-chain amino acid transporter permease LivH YP_002144029.1 3517914 R 554290 CDS YP_002144030.1 197364393 complement(3518900..3520009) 1 NC_011147.1 similar to Salmonella typhi CT18 leucine-specific binding protein; leucine-specific binding protein 3520009 554290003418 SSPA3188 Salmonella enterica subsp. enterica serovar Paratyphi A str. leucine-specific binding protein YP_002144030.1 3518900 R 554290 CDS YP_002144031.1 197364394 3520430..3520813 1 NC_011147.1 hypothetical protein 3520813 yhhK 554290003419 yhhK Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144031.1 3520430 D 554290 CDS YP_002144032.1 197364395 complement(3521007..3522110) 1 NC_011147.1 'similar to Salmonella typhimurium ABC superfamily (bind_prot), branched-chain amino acid transporter,high-affinity'; branched-chain amino acid ABC transporter binding protein 3522110 554290003420 SSPA3189 Salmonella enterica subsp. enterica serovar Paratyphi A str. branched-chain amino acid ABC transporter binding protein YP_002144032.1 3521007 R 554290 CDS YP_002144033.1 197364396 complement(3522432..3523286) 1 NC_011147.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 3523286 554290003421 SSPA3190 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA polymerase factor sigma-32 YP_002144033.1 3522432 R 554290 CDS YP_002144034.1 197364397 complement(3523532..3524587) 1 NC_011147.1 'ABC transporter, membrane protein'; cell division protein FtsX 3524587 ftsX 554290003422 ftsX Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsX YP_002144034.1 3523532 R 554290 CDS YP_002144035.1 197364398 complement(3524580..3525248) 1 NC_011147.1 'ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions'; cell division protein FtsE 3525248 554290003423 SSPA3192 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsE YP_002144035.1 3524580 R 554290 CDS YP_002144036.1 197364399 complement(3525251..3526726) 1 NC_011147.1 signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; cell division protein FtsY 3526726 554290003424 SSPA3193 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsY YP_002144036.1 3525251 R 554290 CDS YP_002144037.1 197364400 3526852..3527448 1 NC_011147.1 catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 3527448 rsmD 554290003425 rsmD Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S rRNA m(2)G966-methyltransferase YP_002144037.1 3526852 D 554290 CDS YP_002144038.1 197364401 3527435..3527707 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3527707 554290003426 SSPA3195 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144038.1 3527435 D 554290 CDS YP_002144039.1 197364402 complement(3527729..3528100) 1 NC_011147.1 hypothetical protein 3528100 554290003427 SSPA3196 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144039.1 3527729 R 554290 CDS YP_002144040.1 197364403 3528242..3528868 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3528868 554290003428 SSPA3197 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144040.1 3528242 D 554290 CDS YP_002144041.1 197364404 3528949..3531147 1 NC_011147.1 'P-type ATPase involved in the export of lead, cadmium, zinc and mercury'; zinc/cadmium/mercury/lead-transporting ATPase 3531147 zntA 554290003429 zntA Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc/cadmium/mercury/lead-transporting ATPase YP_002144041.1 3528949 D 554290 CDS YP_002144042.1 197364405 3531344..3532987 1 NC_011147.1 similar to Salmonella typhi CT18 methyl-accepting chemotaxis citrate transducer; methyl-accepting chemotaxis citrate transducer 3532987 554290003430 SSPA3199 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyl-accepting chemotaxis citrate transducer YP_002144042.1 3531344 D 554290 CDS YP_002144043.1 197364406 complement(3533011..3533256) 1 NC_011147.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 3533256 554290003431 SSPA3200 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfur transfer protein SirA YP_002144043.1 3533011 R 554290 CDS YP_002144044.1 197364407 3533426..3534091 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3534091 554290003432 SSPA3201 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144044.1 3533426 D 554290 CDS YP_002144045.1 197364408 complement(3534726..3535943) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; major facilitator superfamily transporter 3535943 554290003434 SSPA3204 Salmonella enterica subsp. enterica serovar Paratyphi A str. major facilitator superfamily transporter YP_002144045.1 3534726 R 554290 CDS YP_002144046.1 197364409 3536075..3537124 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3537124 554290003435 SSPA3205 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144046.1 3536075 D 554290 CDS YP_002144047.1 197364410 3537176..3537754 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; holo-(acyl carrier protein) synthase 2 3537754 554290003436 SSPA3206 Salmonella enterica subsp. enterica serovar Paratyphi A str. holo-(acyl carrier protein) synthase 2 YP_002144047.1 3537176 D 554290 CDS YP_002144048.1 197364411 3537846..3538247 1 NC_011147.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 3538247 554290003437 SSPA3207 Salmonella enterica subsp. enterica serovar Paratyphi A str. nickel responsive regulator YP_002144048.1 3537846 D 554290 CDS YP_002144049.1 197364412 complement(3538349..3539473) 1 NC_011147.1 similar to Salmonella typhimurium ABC superfamily (atp_bind/membrane) transport protein; ABC transporter protein ATP-binding/membrane protein 3539473 554290003438 SSPA3208 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter protein ATP-binding/membrane protein YP_002144049.1 3538349 R 554290 CDS YP_002144050.1 197364413 complement(3539473..3542214) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; hypothetical protein 3542214 554290003439 SSPA3209 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144050.1 3539473 R 554290 CDS YP_002144051.1 197364414 complement(3542211..3543269) 1 NC_011147.1 similar to Salmonella typhi Ty2 HlyD-family secretion protein; HlyD-family secretion protein 3543269 554290003440 SSPA3210 Salmonella enterica subsp. enterica serovar Paratyphi A str. HlyD-family secretion protein YP_002144051.1 3542211 R 554290 CDS YP_002144052.1 197364415 3544056..3545348 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3545348 554290003441 SSPA3211 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144052.1 3544056 D 554290 CDS YP_002144053.1 197364416 3545364..3546530 1 NC_011147.1 similar to Salmonella typhi CT18 aminotransferase; aminotransferase 3546530 554290003442 SSPA3212 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminotransferase YP_002144053.1 3545364 D 554290 CDS YP_002144054.1 197364417 3546540..3546920 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 3546920 554290003443 SSPA3213 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002144054.1 3546540 D 554290 CDS YP_002144055.1 197364418 3546959..3547606 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 3547606 554290003444 SSPA3214 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein YP_002144055.1 3546959 D 554290 CDS YP_002144056.1 197364419 3547661..3548902 1 NC_011147.1 similar to |18309404|ref|NP_561338.1| conserved hypothetical protein [Clostridium perfringens str. 13]; hypothetical protein 3548902 554290003445 SSPA3215 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144056.1 3547661 D 554290 CDS YP_002144057.1 197364420 complement(3549188..3549304) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3549304 554290003446 SSPA3216 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144057.1 3549188 R 554290 CDS YP_002144058.1 197364421 complement(3549404..3550606) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3550606 554290003447 SSPA3217 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144058.1 3549404 R 554290 CDS YP_002144059.2 449784992 3550837..3552333 1 NC_011147.1 similar to Salmonella typhi CT18 low-affinity inorganic phosphate transporter; low-affinity inorganic phosphate transporter 3552333 554290003448 SSPA3218 Salmonella enterica subsp. enterica serovar Paratyphi A str. low-affinity inorganic phosphate transporter YP_002144059.2 3550837 D 554290 CDS YP_002144060.1 197364423 complement(3552473..3552808) 1 NC_011147.1 'ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress'; universal stress protein UspB 3552808 554290003449 SSPA3219 Salmonella enterica subsp. enterica serovar Paratyphi A str. universal stress protein UspB YP_002144060.1 3552473 R 554290 CDS YP_002144061.1 197364424 3553196..3553630 1 NC_011147.1 similar to Salmonella typhi CT18 universal stress protein A; universal stress protein A 3553630 554290003450 SSPA3220 Salmonella enterica subsp. enterica serovar Paratyphi A str. universal stress protein A YP_002144061.1 3553196 D 554290 CDS YP_002144062.1 197364425 3553960..3555432 1 NC_011147.1 member of the POT family of peptide transporters; probable proton-dependent peptide transporter function; inner membrane transporter YhiP 3555432 554290003451 SSPA3221 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane transporter YhiP YP_002144062.1 3553960 D 554290 CDS YP_002144063.1 197364426 complement(3555524..3556282) 1 NC_011147.1 predicted SAM-dependent methyltransferase; methyltransferase 3556282 554290003452 SSPA3222 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyltransferase YP_002144063.1 3555524 R 554290 CDS YP_002144064.1 197364427 complement(3556289..3558331) 1 NC_011147.1 similar to Salmonella typhi CT18 oligopeptidase A; oligopeptidase A 3558331 554290003453 SSPA3223 Salmonella enterica subsp. enterica serovar Paratyphi A str. oligopeptidase A YP_002144064.1 3556289 R 554290 CDS YP_002144065.1 197364428 complement(3558494..3559147) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 3559147 554290003454 SSPA3224 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144065.1 3558494 R 554290 CDS YP_002144066.1 197364429 3559377..3559868 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3559868 554290003455 SSPA3225 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144066.1 3559377 D 554290 CDS YP_002144067.1 197364430 3559989..3560831 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3560831 554290003456 SSPA3226 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144067.1 3559989 D 554290 CDS YP_002144068.1 197364431 3560936..3562288 1 NC_011147.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 3562288 554290003457 SSPA3227 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione reductase YP_002144068.1 3560936 D 554290 CDS YP_002144069.1 197364432 complement(3563628..3564347) 1 NC_011147.1 similar to Salmonella typhi CT18 gntR family regulatory protein; gntR family regulatory protein 3564347 554290003460 SSPA3230 Salmonella enterica subsp. enterica serovar Paratyphi A str. gntR family regulatory protein YP_002144069.1 3563628 R 554290 CDS YP_002144070.1 197364433 3564673..3566322 1 NC_011147.1 cytoplasmic; catalyzes the hydrolysis of trehalose to glucose; trehalase 3566322 treF 554290003461 treF Salmonella enterica subsp. enterica serovar Paratyphi A str. trehalase YP_002144070.1 3564673 D 554290 CDS YP_002144071.1 197364434 complement(3566335..3567924) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3567924 554290003462 SSPA3232 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144071.1 3566335 R 554290 CDS YP_002144072.1 197364435 3568205..3568561 1 NC_011147.1 similar to Salmonella typhi CT18 phage-like lysozyme; phage-like lysozyme 3568561 554290003463 SSPA3233 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage-like lysozyme YP_002144072.1 3568205 D 554290 CDS YP_002144073.1 197364436 complement(3568567..3569169) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical luxR-family transcriptional regulator; hypothetical protein 3569169 554290003464 SSPA3234 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144073.1 3568567 R 554290 CDS YP_002144074.1 197364437 3570773..3571801 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3571801 554290003466 SSPA3235 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144074.1 3570773 D 554290 CDS YP_002144075.1 197364438 3572152..3573474 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical metabolite transport protein; hypothetical protein 3573474 554290003467 SSPA3236 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144075.1 3572152 D 554290 CDS YP_002144076.1 197364439 complement(3575682..3576449) 1 NC_011147.1 in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein 3576449 554290003469 SSPA3237 Salmonella enterica subsp. enterica serovar Paratyphi A str. EAL domain-containing protein YP_002144076.1 3575682 R 554290 CDS YP_002144077.1 197364440 3576678..3577607 1 NC_011147.1 similar to Salmonella typhi CT18 2-dehydro-3-deoxygluconokinase; 2-dehydro-3-deoxygluconokinase 3577607 554290003470 SSPA3238 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-dehydro-3-deoxygluconokinase YP_002144077.1 3576678 D 554290 CDS YP_002144078.1 197364441 complement(3577661..3579148) 1 NC_011147.1 similar to Salmonella typhi CT18 zinc-protease precursor; zinc-protease 3579148 554290003471 SSPA3239 Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc-protease YP_002144078.1 3577661 R 554290 CDS YP_002144079.1 197364442 complement(3579347..3580654) 1 NC_011147.1 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 3580654 554290003472 SSPA3240 Salmonella enterica subsp. enterica serovar Paratyphi A str. C4-dicarboxylate transporter DctA YP_002144079.1 3579347 R 554290 CDS YP_002144080.2 449784993 complement(3580812..3582818) 1 NC_011147.1 HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a phosphodiesterase protein from E. coli; phosphodiesterase 3582818 554290003473 SSPA3241 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphodiesterase YP_002144080.2 3580812 R 554290 CDS YP_002144081.2 449784994 complement(3582992..3586534) 1 NC_011147.1 'cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA'; cellulose synthase subunit BcsC 3586534 554290003474 SSPA3242 Salmonella enterica subsp. enterica serovar Paratyphi A str. cellulose synthase subunit BcsC YP_002144081.2 3582992 R 554290 CDS YP_002144082.1 197364445 complement(3586516..3587625) 1 NC_011147.1 'catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans'; endo-1,4-D-glucanase 3587625 554290003475 SSPA3243 Salmonella enterica subsp. enterica serovar Paratyphi A str. endo-1,4-D-glucanase YP_002144082.1 3586516 R 554290 CDS YP_002144083.1 197364446 complement(3587629..3589929) 1 NC_011147.1 'binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)'; cellulose synthase regulator protein 3589929 554290003476 SSPA3244 Salmonella enterica subsp. enterica serovar Paratyphi A str. cellulose synthase regulator protein YP_002144083.1 3587629 R 554290 CDS YP_002144084.1 197364447 complement(3592561..3593313) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; cell division protein 3593313 554290003478 SSPA3245 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein YP_002144084.1 3592561 R 554290 CDS YP_002144085.1 197364448 complement(3593314..3593517) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3593517 554290003479 SSPA3246 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144085.1 3593314 R 554290 CDS YP_002144086.1 197364449 3593762..3595333 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3595333 554290003480 SSPA3247 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144086.1 3593762 D 554290 CDS YP_002144087.1 197364450 3595330..3595521 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3595521 554290003481 SSPA3248 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144087.1 3595330 D 554290 CDS YP_002144088.1 197364451 3595518..3597197 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3597197 554290003482 SSPA3249 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144088.1 3595518 D 554290 CDS YP_002144089.1 197364452 complement(3597279..3597410) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3597410 554290003483 SSPA3250 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144089.1 3597279 R 554290 CDS YP_002144090.1 197364453 3598018..3599316 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid permease; amino acid permease 3599316 554290003485 SSPA3251 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid permease YP_002144090.1 3598018 D 554290 CDS YP_002144091.1 197364454 complement(3599626..3600639) 1 NC_011147.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 3600639 dppF 554290003486 dppF Salmonella enterica subsp. enterica serovar Paratyphi A str. dipeptide transporter ATP-binding subunit YP_002144091.1 3599626 R 554290 CDS YP_002144092.1 197364455 complement(3600636..3601619) 1 NC_011147.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 3601619 dppD 554290003487 dppD Salmonella enterica subsp. enterica serovar Paratyphi A str. dipeptide transporter ATP-binding subunit YP_002144092.1 3600636 R 554290 CDS YP_002144093.1 197364456 complement(3601630..3602532) 1 NC_011147.1 similar to Salmonella typhi CT18 dipeptide transport system permease protein DppC; dipeptide transporter 3602532 554290003488 SSPA3254 Salmonella enterica subsp. enterica serovar Paratyphi A str. dipeptide transporter YP_002144093.1 3601630 R 554290 CDS YP_002144094.1 197364457 complement(3602542..3603561) 1 NC_011147.1 transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 3603561 554290003489 SSPA3255 Salmonella enterica subsp. enterica serovar Paratyphi A str. dipeptide transporter permease DppB YP_002144094.1 3602542 R 554290 CDS YP_002144095.1 197364458 complement(3603718..3605274) 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic dipeptide transport protein precursor; dipeptide transport protein 3605274 554290003490 SSPA3256 Salmonella enterica subsp. enterica serovar Paratyphi A str. dipeptide transport protein YP_002144095.1 3603718 R 554290 CDS YP_002144096.1 197364459 complement(3605882..3607207) 1 NC_011147.1 similar to Salmonella typhimurium xanthine permease; xanthine permease 3607207 554290003491 SSPA3257 Salmonella enterica subsp. enterica serovar Paratyphi A str. xanthine permease YP_002144096.1 3605882 R 554290 CDS YP_002144097.1 197364460 complement(3607265..3608389) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3608389 554290003492 SSPA3258 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144097.1 3607265 R 554290 CDS YP_002144098.1 197364461 3608539..3609546 1 NC_011147.1 similar to Salmonella typhi CT18 lacI-family transcriptional regulator; lacI-family transcriptional regulator 3609546 554290003493 SSPA3259 Salmonella enterica subsp. enterica serovar Paratyphi A str. lacI-family transcriptional regulator YP_002144098.1 3608539 D 554290 CDS YP_002144099.1 197364462 complement(3609873..3611564) 1 NC_011147.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 3611564 yhjW 554290003495 yhjW Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoethanolamine transferase YP_002144099.1 3609873 R 554290 CDS YP_002144100.1 197364463 complement(3611795..3612499) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3612499 554290003496 SSPA3260 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144100.1 3611795 R 554290 CDS YP_002144101.1 197364464 3612656..3613237 1 NC_011147.1 'constitutive, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine'; 3-methyladenine DNA glycosylase 3613237 554290003497 SSPA3261 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-methyladenine DNA glycosylase YP_002144101.1 3612656 D 554290 CDS YP_002144102.1 197364465 3613215..3613655 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; hypothetical protein 3613655 554290003498 SSPA3262 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144102.1 3613215 D 554290 CDS YP_002144103.1 197364466 complement(3613624..3615957) 1 NC_011147.1 similar to Salmonella typhi CT18 biotin sulfoxide reductase; biotin sulfoxide reductase 3615957 554290003499 SSPA3263 Salmonella enterica subsp. enterica serovar Paratyphi A str. biotin sulfoxide reductase YP_002144103.1 3613624 R 554290 CDS YP_002144104.1 197364467 3616143..3616760 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane lipoprotein 3616760 554290003500 SSPA3264 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein YP_002144104.1 3616143 D 554290 CDS YP_002144105.1 197364468 3616979..3617953 1 NC_011147.1 similar to Salmonella typhi CT18 2-hydroxyacid dehydrogenase; 2-hydroxyacid dehydrogenase 3617953 554290003501 SSPA3265 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-hydroxyacid dehydrogenase YP_002144105.1 3616979 D 554290 CDS YP_002144106.1 197364469 complement(3618003..3618713) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3618713 554290003502 SSPA3266 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144106.1 3618003 R 554290 CDS YP_008144953.1 516595081 3619110..3619442 1 NC_011147.1 transcriptional regulator 3619442 554290003503 SSPA3266a Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_008144953.1 3619110 D 554290 CDS YP_002144107.1 197364470 3619730..3619942 1 NC_011147.1 similar to Salmonella typhi CT18 cold shock protein; major cold shock protein 3619942 554290003504 SSPA3267 Salmonella enterica subsp. enterica serovar Paratyphi A str. major cold shock protein YP_002144107.1 3619730 D 554290 CDS YP_002144108.1 197364471 3620120..3620659 1 NC_011147.1 hypothetical protein 3620659 554290003505 SSPA3268 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144108.1 3620120 D 554290 CDS YP_002144109.1 197364472 complement(3621033..3621518) 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 3621518 554290003506 SSPA3269 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002144109.1 3621033 R 554290 CDS YP_002144110.1 197364473 complement(3621506..3621793) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3621793 554290003507 SSPA3270 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144110.1 3621506 R 554290 CDS YP_002144111.1 197364474 complement(3621971..3622438) 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 3622438 554290003508 SSPA3271 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002144111.1 3621971 R 554290 CDS YP_008144954.1 516595082 complement(3622649..3623083) 1 NC_011147.1 hypothetical protein 3623083 554290003509 SSPA3271a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_008144954.1 3622649 R 554290 CDS YP_002144113.1 197364476 complement(3623398..3625467) 1 NC_011147.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 3625467 glyS 554290003510 glyS Salmonella enterica subsp. enterica serovar Paratyphi A str. glycyl-tRNA synthetase subunit beta YP_002144113.1 3623398 R 554290 CDS YP_002144114.1 197364477 complement(3625477..3626388) 1 NC_011147.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 3626388 glyQ 554290003511 glyQ Salmonella enterica subsp. enterica serovar Paratyphi A str. glycyl-tRNA synthetase subunit alpha YP_002144114.1 3625477 R 554290 CDS YP_002144115.1 197364478 complement(3626527..3626829) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 3626829 554290003512 SSPA3275 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144115.1 3626527 R 554290 CDS YP_002144116.1 197364479 3626995..3627990 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3627990 554290003513 SSPA3276 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144116.1 3626995 D 554290 CDS YP_002144117.1 197364480 complement(3628013..3628366) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3628366 554290003514 SSPA3277 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144117.1 3628013 R 554290 CDS YP_002144118.1 197364481 complement(3628541..3629995) 1 NC_011147.1 similar to Salmonella typhi CT18 xylulose kinase; xylulose kinase 3629995 554290003515 SSPA3278 Salmonella enterica subsp. enterica serovar Paratyphi A str. xylulose kinase YP_002144118.1 3628541 R 554290 CDS YP_002144119.1 197364482 3631735..3632913 1 NC_011147.1 similar to Salmonella typhi CT18 xylose operon regulatory protein; xylose operon regulatory protein 3632913 554290003517 SSPA3280 Salmonella enterica subsp. enterica serovar Paratyphi A str. xylose operon regulatory protein YP_002144119.1 3631735 D 554290 CDS YP_002144120.1 197364483 complement(3632974..3633798) 1 NC_011147.1 similar to Salmonella typhi CT18 exported amidase; hypothetical protein 3633798 554290003518 SSPA3281 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144120.1 3632974 R 554290 CDS YP_002144121.1 197364484 3634114..3636141 1 NC_011147.1 'periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds'; periplasmic alpha-amylase 3636141 malS 554290003519 malS Salmonella enterica subsp. enterica serovar Paratyphi A str. periplasmic alpha-amylase YP_002144121.1 3634114 D 554290 CDS YP_002144122.1 197364485 3636315..3637565 1 NC_011147.1 'transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis'; valine--pyruvate transaminase 3637565 avtA 554290003520 avtA Salmonella enterica subsp. enterica serovar Paratyphi A str. valine--pyruvate transaminase YP_002144122.1 3636315 D 554290 CDS YP_002144123.1 197364486 complement(3637602..3638075) 1 NC_011147.1 similar to Salmonella typhi CT18 electron-transport protein; electron-transport protein 3638075 554290003521 SSPA3284 Salmonella enterica subsp. enterica serovar Paratyphi A str. electron-transport protein YP_002144123.1 3637602 R 554290 CDS YP_002144124.1 197364487 complement(3638192..3638992) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 3638992 554290003522 SSPA3285 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144124.1 3638192 R 554290 CDS YP_002144125.1 197364488 3639222..3640220 1 NC_011147.1 'NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate'; 2,3-diketo-L-gulonate reductase 3640220 554290003523 SSPA3286 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,3-diketo-L-gulonate reductase YP_002144125.1 3639222 D 554290 CDS YP_002144126.1 197364489 3640232..3640696 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3640696 554290003524 SSPA3287 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144126.1 3640232 D 554290 CDS YP_002144127.1 197364490 3641791..3642264 1 NC_011147.1 'membrane-spanning protein involved in uptake of 2,3-diketo-L-gulonate; part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO'; 2,3-diketo-L-gulonate TRAP transporter small permease YiaM 3642264 554290003526 SSPA3288 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2,3-diketo-L-gulonate TRAP transporter small permease YiaM YP_002144127.1 3641791 D 554290 CDS YP_002144128.1 197364491 3642267..3643544 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3643544 554290003527 SSPA3289 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144128.1 3642267 D 554290 CDS YP_002144129.1 197364492 3643556..3644542 1 NC_011147.1 similar to Salmonella typhimurium dicarboxylate-binding periplasmic protein; dicarboxylate-binding periplasmic protein 3644542 554290003528 SSPA3290 Salmonella enterica subsp. enterica serovar Paratyphi A str. dicarboxylate-binding periplasmic protein YP_002144129.1 3643556 D 554290 CDS YP_002144130.1 197364493 3644546..3646012 1 NC_011147.1 similar to Salmonella typhi CT18 L-xylulose kinase; C-terminal deletion relative to other Salmonella enterica; L-xylulose kinase 3646012 554290003529 SSPA3291 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-xylulose kinase YP_002144130.1 3644546 D 554290 CDS YP_002144131.1 197364494 3646009..3646671 1 NC_011147.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate; 3-keto-L-gulonate-6-phosphate decarboxylase 3646671 sgbH 554290003530 sgbH Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-keto-L-gulonate-6-phosphate decarboxylase YP_002144131.1 3646009 D 554290 CDS YP_002144132.1 197364495 3646664..3647524 1 NC_011147.1 'L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate'; L-xylulose 5-phosphate 3-epimerase 3647524 554290003531 SSPA3293 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-xylulose 5-phosphate 3-epimerase YP_002144132.1 3646664 D 554290 CDS YP_002144133.1 197364496 3647518..3648213 1 NC_011147.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 3648213 sgbE 554290003532 sgbE Salmonella enterica subsp. enterica serovar Paratyphi A str. L-ribulose-5-phosphate 4-epimerase YP_002144133.1 3647518 D 554290 CDS YP_002144134.1 197364497 complement(3648374..3649189) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 3649189 554290003533 SSPA3295 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144134.1 3648374 R 554290 CDS YP_002144135.1 197364498 3649453..3651408 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3651408 554290003534 SSPA3296 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144135.1 3649453 D 554290 CDS YP_002144136.1 197364499 complement(3651694..3653232) 1 NC_011147.1 similar to Salmonella typhi CT18 aldehyde dehydrogenase B; aldehyde dehydrogenase B 3653232 554290003535 SSPA3297 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldehyde dehydrogenase B YP_002144136.1 3651694 R 554290 CDS YP_002144137.1 197364500 3653401..3654282 1 NC_011147.1 similar to Salmonella typhi CT18 sugar kinase; sugar kinase 3654282 554290003536 SSPA3298 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar kinase YP_002144137.1 3653401 D 554290 CDS YP_002144138.1 197364501 complement(3654530..3656380) 1 NC_011147.1 similar to Salmonella typhi CT18 selenocysteine-specific elongation factor; selenocysteinyl-tRNA-specific translation factor 3656380 554290003537 SSPA3299 Salmonella enterica subsp. enterica serovar Paratyphi A str. selenocysteinyl-tRNA-specific translation factor YP_002144138.1 3654530 R 554290 CDS YP_002144139.1 197364502 complement(3656377..3657768) 1 NC_011147.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 3657768 554290003538 SSPA3300 Salmonella enterica subsp. enterica serovar Paratyphi A str. selenocysteine synthase YP_002144139.1 3656377 R 554290 CDS YP_002144140.1 197364503 complement(3657867..3658475) 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione transferase; glutathione S-transferase 3658475 554290003539 SSPA3301 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione S-transferase YP_002144140.1 3657867 R 554290 CDS YP_002144141.1 197364504 3658951..3660867 1 NC_011147.1 similar to Salmonella typhi CT18 mannitol-specific enzyme II of phosphotransferase system; mannitol-specific enzyme II of phosphotransferase system 3660867 554290003540 SSPA3302 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannitol-specific enzyme II of phosphotransferase system YP_002144141.1 3658951 D 554290 CDS YP_002144142.1 197364505 3661088..3662236 1 NC_011147.1 similar to Salmonella typhi CT18 mannitol-1-phosphate dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 3662236 554290003541 SSPA3303 Salmonella enterica subsp. enterica serovar Paratyphi A str. mannitol-1-phosphate 5-dehydrogenase YP_002144142.1 3661088 D 554290 CDS YP_002144143.1 197364506 complement(3662832..3663041) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3663041 554290003543 SSPA3304 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144143.1 3662832 R 554290 CDS YP_002144144.1 197364507 3663332..3663694 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3663694 554290003544 SSPA3305 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144144.1 3663332 D 554290 CDS YP_002144145.1 197364508 3664181..3664864 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 3664864 554290003545 SSPA3306 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144145.1 3664181 D 554290 CDS YP_002144146.1 197364509 3669534..3671189 1 NC_011147.1 similar to Salmonella typhi CT18 L-lactate permease; L-lactate permease 3671189 554290003547 SSPA3307 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-lactate permease YP_002144146.1 3669534 D 554290 CDS YP_002144147.1 197364510 3671186..3671962 1 NC_011147.1 represses the lctPRD operon; DNA-binding transcriptional repressor LldR 3671962 554290003548 SSPA3308 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor LldR YP_002144147.1 3671186 D 554290 CDS YP_002144148.1 197364511 3671959..3673149 1 NC_011147.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 3673149 lldD 554290003549 lldD Salmonella enterica subsp. enterica serovar Paratyphi A str. L-lactate dehydrogenase YP_002144148.1 3671959 D 554290 CDS YP_002144149.1 197364512 3673214..3673687 1 NC_011147.1 member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates; tRNA/rRNA methyltransferase YibK 3673687 554290003550 SSPA3310 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA/rRNA methyltransferase YibK YP_002144149.1 3673214 D 554290 CDS YP_002144150.1 197364513 complement(3673755..3674810) 1 NC_011147.1 similar to Salmonella typhi CT18 lacI family transcriptional regulator regulator; lacI family transcriptional regulator 3674810 554290003551 SSPA3311 Salmonella enterica subsp. enterica serovar Paratyphi A str. lacI family transcriptional regulator YP_002144150.1 3673755 R 554290 CDS YP_002144151.1 197364514 3675078..3676274 1 NC_011147.1 similar to Salmonella typhi CT18 racemase; racemase 3676274 554290003552 SSPA3312 Salmonella enterica subsp. enterica serovar Paratyphi A str. racemase YP_002144151.1 3675078 D 554290 CDS YP_002144152.1 197364515 3676348..3677658 1 NC_011147.1 similar to |16077317|ref|NP_388130.1| similar to glucarate transporter [Bacillus subtilis]; hypothetical protein 3677658 554290003553 SSPA3313 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144152.1 3676348 D 554290 CDS YP_002144153.1 197364516 complement(3677741..3678562) 1 NC_011147.1 catalyzes the O-acetylation of serine; serine acetyltransferase 3678562 cysE 554290003554 cysE Salmonella enterica subsp. enterica serovar Paratyphi A str. serine acetyltransferase YP_002144153.1 3677741 R 554290 CDS YP_002144154.1 197364517 complement(3678640..3679659) 1 NC_011147.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 3679659 gpsA 554290003555 gpsA Salmonella enterica subsp. enterica serovar Paratyphi A str. NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002144154.1 3678640 R 554290 CDS YP_002144155.1 197364518 complement(3679659..3680126) 1 NC_011147.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 3680126 554290003556 SSPA3316 Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecB YP_002144155.1 3679659 R 554290 CDS YP_002144156.1 197364519 complement(3680170..3680421) 1 NC_011147.1 similar to Salmonella typhi CT18 glutaredoxin 3; glutaredoxin 3 3680421 554290003557 SSPA3317 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutaredoxin 3 YP_002144156.1 3680170 R 554290 CDS YP_002144157.1 197364520 complement(3680507..3680938) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 3680938 554290003558 SSPA3318 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144157.1 3680507 R 554290 CDS YP_002144158.1 197364521 3681207..3682730 1 NC_011147.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 3682730 554290003559 SSPA3319 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglyceromutase YP_002144158.1 3681207 D 554290 CDS YP_002144159.1 197364522 3682740..3684023 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3684023 554290003560 SSPA3320 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144159.1 3682740 D 554290 CDS YP_002144160.1 197364523 3684027..3684989 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3684989 554290003561 SSPA3321 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144160.1 3684027 D 554290 CDS YP_002144161.1 197364524 complement(3684976..3686010) 1 NC_011147.1 similar to Salmonella typhi Ty2 glycosyl transferase; glycosyl transferase family protein 3686010 554290003562 SSPA3322 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl transferase family protein YP_002144161.1 3684976 R 554290 CDS YP_002144162.1 197364525 complement(3686505..3687530) 1 NC_011147.1 'converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism'; L-threonine 3-dehydrogenase 3687530 tdh 554290003563 tdh Salmonella enterica subsp. enterica serovar Paratyphi A str. L-threonine 3-dehydrogenase YP_002144162.1 3686505 R 554290 CDS YP_002144163.1 197364526 complement(3687540..3688736) 1 NC_011147.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 3688736 554290003564 SSPA3324 Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-amino-3-ketobutyrate coenzyme A ligase YP_002144163.1 3687540 R 554290 CDS YP_002144164.1 197364527 3688939..3689871 1 NC_011147.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 3689871 rfaD 554290003565 rfaD Salmonella enterica subsp. enterica serovar Paratyphi A str. ADP-L-glycero-D-manno-heptose-6-epimerase YP_002144164.1 3688939 D 554290 CDS YP_002144165.1 197364528 3689874..3690920 1 NC_011147.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase 3690920 554290003566 SSPA3326 Salmonella enterica subsp. enterica serovar Paratyphi A str. ADP-heptose--LPS heptosyltransferase YP_002144165.1 3689874 D 554290 CDS YP_002144166.1 197364529 3690920..3691873 1 NC_011147.1 similar to Salmonella typhi Ty2 lipopolysaccharide heptosyltransferase-1; ADP-heptose--LPS heptosyltransferase 3691873 554290003567 SSPA3327 Salmonella enterica subsp. enterica serovar Paratyphi A str. ADP-heptose--LPS heptosyltransferase YP_002144166.1 3690920 D 554290 CDS YP_002144167.1 197364530 3691913..3693127 1 NC_011147.1 similar to Salmonella typhi Ty2 O-antigen ligase; O-antigen ligase 3693127 554290003568 SSPA3328 Salmonella enterica subsp. enterica serovar Paratyphi A str. O-antigen ligase YP_002144167.1 3691913 D 554290 CDS YP_002144168.1 197364531 complement(3693183..3694328) 1 NC_011147.1 lipopolysaccharide 1,2-N-acetylglucosaminetransferase 3694328 waaK 554290003569 waaK Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide 1,2-N-acetylglucosaminetransferase YP_002144168.1 3693183 R 554290 CDS YP_002144169.1 197364532 complement(3694428..3695237) 1 NC_011147.1 similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein RfaZ; lipopolysaccharide core biosynthesis protein 3695237 554290003570 SSPA3330 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide core biosynthesis protein YP_002144169.1 3694428 R 554290 CDS YP_002144170.1 197364533 complement(3695387..3696085) 1 NC_011147.1 lipopolysaccharide core biosynthesis protein 3696085 waaY 554290003571 waaY Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide core biosynthesis protein YP_002144170.1 3695387 R 554290 CDS YP_002144171.1 197364534 complement(3696108..3697118) 1 NC_011147.1 'similar to Salmonella typhi Ty2 lipopolysaccharide 1,2-glucosyltransferase'; lipopolysaccharide 1,2-glucosyltransferase 3697118 554290003572 SSPA3332 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide 1,2-glucosyltransferase YP_002144171.1 3696108 R 554290 CDS YP_002144172.1 197364535 complement(3697136..3698149) 1 NC_011147.1 'similar to Salmonella typhi Ty2 lipopolysaccharide 1,3-galactosyltransferase'; lipopolysaccharide 1,3-galactosyltransferase 3698149 554290003573 SSPA3333 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide 1,3-galactosyltransferase YP_002144172.1 3697136 R 554290 CDS YP_002144173.1 197364536 complement(3698155..3699234) 1 NC_011147.1 'similar to Salmonella typhi Ty2 lipopolysaccharide 1,6-galactosyltransferase'; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 3699234 554290003574 SSPA3334 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase YP_002144173.1 3698155 R 554290 CDS YP_002144174.1 197364537 complement(3699248..3700228) 1 NC_011147.1 similar to |21952254|gb|AAM82549.1| WabA-like protein [Salmonella enterica]; hypothetical protein 3700228 554290003575 SSPA3335 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144174.1 3699248 R 554290 CDS YP_002144175.1 197364538 complement(3700284..3701081) 1 NC_011147.1 similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein 3701081 554290003576 SSPA3336 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide core biosynthesis protein YP_002144175.1 3700284 R 554290 CDS YP_002144176.1 197364539 complement(3701074..3702198) 1 NC_011147.1 similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein 3702198 554290003577 SSPA3337 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide core biosynthesis protein YP_002144176.1 3701074 R 554290 CDS YP_002144177.1 197364540 complement(3702195..3703229) 1 NC_011147.1 similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein 3703229 554290003578 SSPA3338 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide core biosynthesis protein YP_002144177.1 3702195 R 554290 CDS YP_002144178.2 449784995 3703674..3704951 1 NC_011147.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 3704951 554290003579 SSPA3339 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-deoxy-D-manno-octulosonic-acid transferase YP_002144178.2 3703674 D 554290 CDS YP_002144179.1 197364542 3704960..3705439 1 NC_011147.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3705439 coaD 554290003580 coaD Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphopantetheine adenylyltransferase YP_002144179.1 3704960 D 554290 CDS YP_002144180.1 197364543 complement(3705467..3706276) 1 NC_011147.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 3706276 554290003581 SSPA3341 Salmonella enterica subsp. enterica serovar Paratyphi A str. formamidopyrimidine-DNA glycosylase YP_002144180.1 3705467 R 554290 CDS YP_002144181.1 197364544 complement(3706374..3706541) 1 NC_011147.1 'in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif'; 50S ribosomal protein L33 3706541 rpmG 554290003582 rpmG Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L33 YP_002144181.1 3706374 R 554290 CDS YP_002144182.1 197364545 complement(3706555..3706791) 1 NC_011147.1 required for 70S ribosome assembly; 50S ribosomal protein L28 3706791 rpmB 554290003583 rpmB Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L28 YP_002144182.1 3706555 R 554290 CDS YP_002144183.1 197364546 complement(3707009..3707674) 1 NC_011147.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 3707674 radC 554290003584 radC Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA repair protein RadC YP_002144183.1 3707009 R 554290 CDS YP_002144184.1 197364547 3707850..3709070 1 NC_011147.1 'catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine'; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3709070 554290003585 SSPA3345 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_002144184.1 3707850 D 554290 CDS YP_002144185.1 197364548 3709051..3709506 1 NC_011147.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 3709506 dut 554290003586 dut Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxyuridine 5'-triphosphate nucleotidohydrolase YP_002144185.1 3709051 D 554290 CDS YP_002144186.1 197364549 3709614..3710210 1 NC_011147.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 3710210 slmA 554290003587 slmA Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleoid occlusion protein YP_002144186.1 3709614 D 554290 CDS YP_002144187.1 197364550 complement(3710288..3710929) 1 NC_011147.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 3710929 pyrE 554290003588 pyrE Salmonella enterica subsp. enterica serovar Paratyphi A str. orotate phosphoribosyltransferase YP_002144187.1 3710288 R 554290 CDS YP_002144188.1 197364551 complement(3711008..3711724) 1 NC_011147.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 3711724 rph 554290003589 rph Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease PH YP_002144188.1 3711008 R 554290 CDS YP_002144189.1 197364552 3711850..3712713 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3712713 554290003590 SSPA3350 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144189.1 3711850 D 554290 CDS YP_002144190.1 197364553 complement(3712763..3713620) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 3713620 554290003591 SSPA3351 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002144190.1 3712763 R 554290 CDS YP_002144191.1 197364554 3713739..3714623 1 NC_011147.1 similar to Salmonella typhi CT18 beta-lactamase; beta-lactamase 3714623 554290003592 SSPA3352 Salmonella enterica subsp. enterica serovar Paratyphi A str. beta-lactamase YP_002144191.1 3713739 D 554290 CDS YP_002144192.1 197364555 3714871..3715488 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3715488 554290003593 SSPA3353 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144192.1 3714871 D 554290 CDS YP_002144193.1 197364556 complement(3715485..3717170) 1 NC_011147.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 3717170 ligB 554290003594 ligB Salmonella enterica subsp. enterica serovar Paratyphi A str. NAD-dependent DNA ligase LigB YP_002144193.1 3715485 R 554290 CDS YP_002144194.1 197364557 3717427..3718050 1 NC_011147.1 'Essential for recycling GMP and indirectly, cGMP'; guanylate kinase 3718050 gmk 554290003595 gmk Salmonella enterica subsp. enterica serovar Paratyphi A str. guanylate kinase YP_002144194.1 3717427 D 554290 CDS YP_002144195.1 197364558 3718105..3718380 1 NC_011147.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3718380 rpoZ 554290003596 rpoZ Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-directed RNA polymerase subunit omega YP_002144195.1 3718105 D 554290 CDS YP_002144196.1 197364559 3718399..3720510 1 NC_011147.1 'similar to Salmonella typhi CT18 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156'; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3720510 554290003597 SSPA3357 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_002144196.1 3718399 D 554290 CDS YP_002144197.1 197364560 3720515..3721204 1 NC_011147.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 3721204 554290003598 SSPA3358 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA guanosine-2'-O-methyltransferase YP_002144197.1 3720515 D 554290 CDS YP_002144198.1 197364561 3721210..3723291 1 NC_011147.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3723291 554290003599 SSPA3359 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent DNA helicase RecG YP_002144198.1 3721210 D 554290 CDS YP_002144199.1 197364562 complement(3723327..3724532) 1 NC_011147.1 similar to Salmonella typhi CT18 glutamate permease; glutamate permease 3724532 554290003600 SSPA3360 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate permease YP_002144199.1 3723327 R 554290 CDS YP_002144200.1 197364563 3724760..3726151 1 NC_011147.1 similar to Salmonella typhi CT18 purine permease; purine permease 3726151 554290003601 SSPA3361 Salmonella enterica subsp. enterica serovar Paratyphi A str. purine permease YP_002144200.1 3724760 D 554290 CDS YP_002144201.1 197364564 3726272..3727981 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3727981 554290003602 SSPA3362 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144201.1 3726272 D 554290 CDS YP_002144202.1 197364565 complement(3730414..3731796) 1 NC_011147.1 may be involved in the transport of galactosides-pentoses-hexuronides; transporter 3731796 554290003604 SSPA3363 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002144202.1 3730414 R 554290 CDS YP_002144203.1 197364566 complement(3732495..3732839) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3732839 554290003606 SSPA3364 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144203.1 3732495 R 554290 CDS YP_002144204.1 197364567 3733399..3733995 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3733995 554290003607 SSPA3365 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144204.1 3733399 D 554290 CDS YP_002144205.1 197364568 3735111..3736094 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 3736094 554290003609 SSPA3366 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein YP_002144205.1 3735111 D 554290 CDS YP_002144206.1 197364569 3737812..3738429 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3738429 554290003611 SSPA3369 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144206.1 3737812 D 554290 CDS YP_002144207.1 197364570 3738504..3741356 1 NC_011147.1 similar to Salmonella typhimurium autotransported protein; autotransported protein 3741356 554290003612 SSPA3370 Salmonella enterica subsp. enterica serovar Paratyphi A str. autotransported protein YP_002144207.1 3738504 D 554290 CDS YP_002144208.1 197364571 complement(3741451..3741813) 1 NC_011147.1 hypothetical protein 3741813 fidL 554290003613 fidL Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144208.1 3741451 R 554290 CDS YP_002144209.2 449784996 complement(3741926..3742714) 1 NC_011147.1 similar to Salmonella typhimurium transcriptional regulatory protein; transcriptional regulator 3742714 554290003614 SSPA3372 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144209.2 3741926 R 554290 CDS YP_002144210.1 197364573 3743568..3744248 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3744248 554290003615 SSPA3373 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144210.1 3743568 D 554290 CDS YP_002144211.1 197364574 complement(3744571..3745050) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3745050 554290003616 SSPA3374 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144211.1 3744571 R 554290 CDS YP_002144212.1 197364575 complement(3745365..3748091) 1 NC_011147.1 'similar to Salmonella typhi CT18 Magnesium transport ATPase, P-type 2'; magnesium transport ATPase 3748091 554290003617 SSPA3375 Salmonella enterica subsp. enterica serovar Paratyphi A str. magnesium transport ATPase YP_002144212.1 3745365 R 554290 CDS YP_002144213.1 197364576 complement(3748311..3749006) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hyopthetical protein; hypothetical protein 3749006 554290003618 SSPA3376 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144213.1 3748311 R 554290 CDS YP_002144214.1 197364577 3749512..3750414 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3750414 554290003619 SSPA3377 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144214.1 3749512 D 554290 CDS YP_002144215.1 197364578 complement(3750457..3751398) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3751398 554290003620 SSPA3378 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144215.1 3750457 R 554290 CDS YP_002144216.1 197364579 complement(3751634..3752377) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3752377 554290003621 SSPA3379 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144216.1 3751634 R 554290 CDS YP_002144217.1 197364580 complement(3752364..3753473) 1 NC_011147.1 similar to Salmonella typhi CT18 transferase; transferase 3753473 554290003622 SSPA3380 Salmonella enterica subsp. enterica serovar Paratyphi A str. transferase YP_002144217.1 3752364 R 554290 CDS YP_002144218.1 197364581 complement(3753477..3754334) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system protein; PTS system protein 3754334 554290003623 SSPA3381 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system protein YP_002144218.1 3753477 R 554290 CDS YP_002144219.1 197364582 complement(3754334..3755083) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system protein; PTS system protein 3755083 554290003624 SSPA3382 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system protein YP_002144219.1 3754334 R 554290 CDS YP_002144220.1 197364583 complement(3755229..3755714) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system protein; PTS system protein 3755714 554290003625 SSPA3383 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system protein YP_002144220.1 3755229 R 554290 CDS YP_002144221.1 197364584 complement(3755725..3756150) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system protein; PTS system protein 3756150 554290003626 SSPA3384 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system protein YP_002144221.1 3755725 R 554290 CDS YP_002144222.1 197364585 complement(3756369..3759167) 1 NC_011147.1 'similar to Salmonella typhimurium NtrC family transcriptional regulators, ATPase domain'; NtrC family transcriptional regulator 3759167 554290003627 SSPA3385 Salmonella enterica subsp. enterica serovar Paratyphi A str. NtrC family transcriptional regulator YP_002144222.1 3756369 R 554290 CDS YP_002144223.1 197364586 3759364..3759657 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 3759657 554290003628 SSPA3386 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144223.1 3759364 D 554290 CDS YP_002144224.1 197364587 3759763..3761136 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyl hydrolase; glycosyl hydrolase 3761136 554290003629 SSPA3387 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycosyl hydrolase YP_002144224.1 3759763 D 554290 CDS YP_002144225.1 197364588 complement(3761196..3762389) 1 NC_011147.1 experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS; ribonucleoside transporter 3762389 nepI 554290003630 nepI Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonucleoside transporter YP_002144225.1 3761196 R 554290 CDS YP_002144226.1 197364589 3762948..3763271 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 3763271 554290003632 SSPA3389 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein YP_002144226.1 3762948 D 554290 CDS YP_002144227.1 197364590 complement(3763362..3763631) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system phosphocarrier protein; PTS system phosphocarrier protein 3763631 554290003633 SSPA3390 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system phosphocarrier protein YP_002144227.1 3763362 R 554290 CDS YP_002144228.1 197364591 complement(3763641..3764501) 1 NC_011147.1 'class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis'; fructose-1,6-bisphosphate aldolase 3764501 gatY 554290003634 gatY Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose-1,6-bisphosphate aldolase YP_002144228.1 3763641 R 554290 CDS YP_002144229.1 197364592 complement(3764564..3766048) 1 NC_011147.1 similar to Salmonella typhi CT18 carbohydrate kinase; carbohydrate kinase 3766048 554290003635 SSPA3392 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbohydrate kinase YP_002144229.1 3764564 R 554290 CDS YP_002144230.1 197364593 complement(3766041..3767399) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system IIC component; PTS system transporter subunit IIC 3767399 554290003636 SSPA3393 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system transporter subunit IIC YP_002144230.1 3766041 R 554290 CDS YP_002144231.1 197364594 complement(3767475..3767762) 1 NC_011147.1 similar to Salmonella typhi CT18 PTS system IIB component; PTS system transporter subunit IIB 3767762 554290003637 SSPA3394 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system transporter subunit IIB YP_002144231.1 3767475 R 554290 CDS YP_002144232.1 197364595 complement(3767759..3768232) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3768232 554290003638 SSPA3395 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144232.1 3767759 R 554290 CDS YP_002144233.1 197364596 complement(3768250..3768993) 1 NC_011147.1 similar to Salmonella typhi CT18 GntR-family transcriptional regulator; GntR family transcriptional regulator 3768993 554290003639 SSPA3396 Salmonella enterica subsp. enterica serovar Paratyphi A str. GntR family transcriptional regulator YP_002144233.1 3768250 R 554290 CDS YP_002144234.1 197364597 complement(3769346..3769798) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 3769798 554290003640 SSPA3397 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144234.1 3769346 R 554290 CDS YP_002144235.1 197364598 complement(3774364..3774954) 1 NC_011147.1 'response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter'; DNA-binding transcriptional activator UhpA 3774954 554290003644 SSPA3398 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator UhpA YP_002144235.1 3774364 R 554290 CDS YP_002144236.1 197364599 complement(3775108..3776121) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3776121 554290003645 SSPA3399 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144236.1 3775108 R 554290 CDS YP_002144237.1 197364600 complement(3776133..3777449) 1 NC_011147.1 similar to Salmonella typhi CT18 probable permease; permease 3777449 554290003646 SSPA3400 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease YP_002144237.1 3776133 R 554290 CDS YP_002144238.1 197364601 complement(3777480..3778400) 1 NC_011147.1 similar to Salmonella typhi CT18 carbohydrate kinase; carbohydrate kinase 3778400 554290003647 SSPA3401 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbohydrate kinase YP_002144238.1 3777480 R 554290 CDS YP_002144239.1 197364602 3778714..3779499 1 NC_011147.1 similar to Salmonella typhi CT18 DeoR-family transcriptional regulator; DeoR-family transcriptional regulator 3779499 554290003648 SSPA3402 Salmonella enterica subsp. enterica serovar Paratyphi A str. DeoR-family transcriptional regulator YP_002144239.1 3778714 D 554290 CDS YP_002144240.1 197364603 complement(3779501..3779791) 1 NC_011147.1 'with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit'; acetolactate synthase 1 regulatory subunit 3779791 554290003649 SSPA3403 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetolactate synthase 1 regulatory subunit YP_002144240.1 3779501 R 554290 CDS YP_002144241.1 197364604 complement(3779795..3781483) 1 NC_011147.1 'similar to Salmonella typhi CT18 acetohydroxy acid synthase I, small subunit'; acetolactate synthase catalytic subunit 3781483 554290003650 SSPA3404 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetolactate synthase catalytic subunit YP_002144241.1 3779795 R 554290 CDS YP_002144242.1 197364605 complement(3781590..3781688) 1 NC_011147.1 similar to Salmonella typhi CT18 ilvBN operon attenuator peptide; ilvB operon leader peptide 3781688 554290003651 SSPA3405 Salmonella enterica subsp. enterica serovar Paratyphi A str. ilvB operon leader peptide YP_002144242.1 3781590 R 554290 CDS YP_002144243.1 197364606 3782504..3783364 1 NC_011147.1 'similar to |23501593|ref|NP_697720.1| membrane protein, [Brucella suis 1330]'; hypothetical protein 3783364 554290003652 SSPA3406 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144243.1 3782504 D 554290 CDS YP_002144244.1 197364607 3783567..3784712 1 NC_011147.1 multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D 3784712 emrD 554290003653 emrD Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug resistance protein D YP_002144244.1 3783567 D 554290 CDS YP_002144245.1 197364608 complement(3784639..3785724) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3785724 554290003654 SSPA3408 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144245.1 3784639 R 554290 CDS YP_002144246.1 197364609 complement(3785788..3786711) 1 NC_011147.1 regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC 3786711 554290003655 SSPA3409 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator DsdC YP_002144246.1 3785788 R 554290 CDS YP_002144247.1 197364610 3786937..3788274 1 NC_011147.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; permease DsdX 3788274 554290003656 SSPA3410 Salmonella enterica subsp. enterica serovar Paratyphi A str. permease DsdX YP_002144247.1 3786937 D 554290 CDS YP_002144248.1 197364611 3788292..3789614 1 NC_011147.1 catalyzes the formation of pyruvate from serine; D-serine dehydratase 3789614 554290003657 SSPA3411 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-serine dehydratase YP_002144248.1 3788292 D 554290 CDS YP_002144249.1 197364612 complement(3789696..3790226) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3790226 554290003658 SSPA3412 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144249.1 3789696 R 554290 CDS YP_002144250.1 197364613 complement(3790223..3790585) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3790585 554290003659 SSPA3413 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144250.1 3790223 R 554290 CDS YP_002144251.1 197364614 complement(3790575..3790922) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3790922 554290003660 SSPA3414 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144251.1 3790575 R 554290 CDS YP_002144252.1 197364615 complement(3791365..3793026) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3793026 554290003661 SSPA3415 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144252.1 3791365 R 554290 CDS YP_002144253.1 197364616 complement(3793215..3793643) 1 NC_011147.1 '16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent'; heat shock chaperone IbpB 3793643 554290003662 SSPA3416 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat shock chaperone IbpB YP_002144253.1 3793215 R 554290 CDS YP_002144254.1 197364617 complement(3793753..3794166) 1 NC_011147.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 3794166 554290003663 SSPA3417 Salmonella enterica subsp. enterica serovar Paratyphi A str. heat shock protein IbpA YP_002144254.1 3793753 R 554290 CDS YP_002144255.1 197364618 3794473..3794808 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 3794808 554290003664 SSPA3418 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144255.1 3794473 D 554290 CDS YP_002144256.1 197364619 complement(3794810..3796036) 1 NC_011147.1 similar to Salmonella typhi CT18 ATP/GTP-binding protein; ATP/GTP-binding protein 3796036 554290003665 SSPA3419 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP/GTP-binding protein YP_002144256.1 3794810 R 554290 CDS YP_002144257.1 197364620 complement(3797103..3797660) 1 NC_011147.1 thiol:disulfide interchange protein 3797660 dsbE2 554290003667 dsbE2 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiol:disulfide interchange protein YP_002144257.1 3797103 R 554290 CDS YP_002144258.1 197364621 complement(3797657..3799588) 1 NC_011147.1 cytochrome c-type biogenesis protein F2 3799588 ccmF2 554290003668 ccmF2 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type biogenesis protein F2 YP_002144258.1 3797657 R 554290 CDS YP_002144259.1 197364622 complement(3799585..3800064) 1 NC_011147.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 3800064 ccmE2 554290003669 ccmE2 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type biogenesis protein CcmE YP_002144259.1 3799585 R 554290 CDS YP_002144260.1 197364623 complement(3800061..3800273) 1 NC_011147.1 similar to Salmonella typhi Ty2 heme exporter protein D1; heme exporter protein D1 3800273 554290003670 SSPA3423 Salmonella enterica subsp. enterica serovar Paratyphi A str. heme exporter protein D1 YP_002144260.1 3800061 R 554290 CDS YP_002144261.1 197364624 complement(3800270..3801007) 1 NC_011147.1 similar to Salmonella typhi Ty2 heme exporter protein C1; heme exporter protein C1 3801007 554290003671 SSPA3424 Salmonella enterica subsp. enterica serovar Paratyphi A str. heme exporter protein C1 YP_002144261.1 3800270 R 554290 CDS YP_002144262.1 197364625 complement(3801715..3802332) 1 NC_011147.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 3802332 554290003672 SSPA3425 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c biogenesis protein CcmA YP_002144262.1 3801715 R 554290 CDS YP_002144263.1 197364626 complement(3802338..3803738) 1 NC_011147.1 similar to Salmonella typhi CT18 probable cytochrome c peroxidase; cytochrome c peroxidase 3803738 554290003673 SSPA3426 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c peroxidase YP_002144263.1 3802338 R 554290 CDS YP_002144264.1 197364627 complement(3803928..3804560) 1 NC_011147.1 'TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor'; chaperone protein TorD 3804560 torD 554290003674 torD Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperone protein TorD YP_002144264.1 3803928 R 554290 CDS YP_002144265.1 197364628 complement(3804553..3807105) 1 NC_011147.1 similar to Salmonella typhi CT18 trimethylamine-N-oxide reductase precursor; trimethylamine-N-oxide reductase 3807105 554290003675 SSPA3428 Salmonella enterica subsp. enterica serovar Paratyphi A str. trimethylamine-N-oxide reductase YP_002144265.1 3804553 R 554290 CDS YP_002144266.1 197364629 complement(3807095..3808279) 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 3808279 554290003676 SSPA3429 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144266.1 3807095 R 554290 CDS YP_002144267.1 197364630 3808409..3809101 1 NC_011147.1 response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes; DNA-binding transcriptional regulator TorR 3809101 554290003677 SSPA3430 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator TorR YP_002144267.1 3808409 D 554290 CDS YP_002144268.1 197364631 complement(3809074..3810114) 1 NC_011147.1 periplasmic sensory protein associated with the TorRS two-component regulatory system; TMAO reductase system periplasmic protein TorT 3810114 554290003678 SSPA3431 Salmonella enterica subsp. enterica serovar Paratyphi A str. TMAO reductase system periplasmic protein TorT YP_002144268.1 3809074 R 554290 CDS YP_002144269.1 197364632 3810194..3812929 1 NC_011147.1 Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide; hybrid sensory histidine kinase TorS 3812929 554290003679 SSPA3432 Salmonella enterica subsp. enterica serovar Paratyphi A str. hybrid sensory histidine kinase TorS YP_002144269.1 3810194 D 554290 CDS YP_002144270.1 197364633 complement(3812955..3814292) 1 NC_011147.1 'similar to Salmonella typhimurium MFS family,D-galactonate transport protein'; MFS family D-galactonate transport protein 3814292 554290003680 SSPA3433 Salmonella enterica subsp. enterica serovar Paratyphi A str. MFS family D-galactonate transport protein YP_002144270.1 3812955 R 554290 CDS YP_002144271.1 197364634 complement(3814377..3815525) 1 NC_011147.1 galactonate dehydratase 3815525 dgoA 554290003681 dgoA Salmonella enterica subsp. enterica serovar Paratyphi A str. galactonate dehydratase YP_002144271.1 3814377 R 554290 CDS YP_002144272.1 197364635 complement(3815522..3816139) 1 NC_011147.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 3816139 554290003682 SSPA3433b Salmonella enterica subsp. enterica serovar Paratyphi A str. 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_002144272.1 3815522 R 554290 CDS YP_002144273.1 197364636 complement(3816485..3818899) 1 NC_011147.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 3818899 gyrB 554290003683 gyrB Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA gyrase subunit B YP_002144273.1 3816485 R 554290 CDS YP_002144274.1 197364637 complement(3818928..3820001) 1 NC_011147.1 'Required for DNA replication; binds preferentially to single-stranded, linear DNA'; recombination protein F 3820001 recF 554290003684 recF Salmonella enterica subsp. enterica serovar Paratyphi A str. recombination protein F YP_002144274.1 3818928 R 554290 CDS YP_002144275.1 197364638 complement(3820149..3821249) 1 NC_011147.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3821249 554290003685 SSPA3436 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit beta YP_002144275.1 3820149 R 554290 CDS YP_002144276.1 197364639 complement(3821254..3822654) 1 NC_011147.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 3822654 dnaA 554290003686 dnaA Salmonella enterica subsp. enterica serovar Paratyphi A str. chromosomal replication initiation protein YP_002144276.1 3821254 R 554290 CDS YP_002144277.1 197364640 3823315..3823455 1 NC_011147.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 3823455 rpmH 554290003687 rpmH Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L34 YP_002144277.1 3823315 D 554290 CDS YP_002144278.1 197364641 3823472..3823831 1 NC_011147.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 3823831 rnpA 554290003688 rnpA Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease P YP_002144278.1 3823472 D 554290 CDS YP_002144279.1 197364642 3823795..3824052 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; hypothetical protein 3824052 554290003689 SSPA3440 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144279.1 3823795 D 554290 CDS YP_002144280.1 197364643 3824055..3825701 1 NC_011147.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 3825701 554290003690 SSPA3441 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein translocase component YidC YP_002144280.1 3824055 D 554290 CDS YP_002144281.1 197364644 3825843..3827207 1 NC_011147.1 'in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE'; tRNA modification GTPase TrmE 3827207 trmE 554290003691 trmE Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA modification GTPase TrmE YP_002144281.1 3825843 D 554290 CDS YP_002144282.1 197364645 3827390..3828577 1 NC_011147.1 Confers resistance to chloramphenicol; multidrug efflux system protein MdtL 3828577 554290003692 SSPA3443 Salmonella enterica subsp. enterica serovar Paratyphi A str. multidrug efflux system protein MdtL YP_002144282.1 3827390 D 554290 CDS YP_002144283.1 197364646 3828603..3829505 1 NC_011147.1 Involved in anaerobic NO protection; DNA-binding transcriptional regulator YidZ 3829505 554290003693 SSPA3444 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YidZ YP_002144283.1 3828603 D 554290 CDS YP_002144284.1 197364647 3829663..3830418 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3830418 554290003694 SSPA3445 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144284.1 3829663 D 554290 CDS YP_002144285.1 197364648 3830418..3831002 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3831002 554290003695 SSPA3446 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144285.1 3830418 D 554290 CDS YP_002144286.1 197364649 complement(3831047..3832510) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein 3832510 554290003696 SSPA3447 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002144286.1 3831047 R 554290 CDS YP_002144287.1 197364650 3832553..3833203 1 NC_011147.1 'YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily'; 6-phosphogluconate phosphatase 3833203 554290003697 SSPA3448 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-phosphogluconate phosphatase YP_002144287.1 3832553 D 554290 CDS YP_002144288.1 197364651 complement(3833313..3834038) 1 NC_011147.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 3834038 554290003698 SSPA3449 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator PhoU YP_002144288.1 3833313 R 554290 CDS YP_002144289.1 197364652 complement(3834053..3834826) 1 NC_011147.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 3834826 pstB 554290003699 pstB Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate transporter ATP-binding protein YP_002144289.1 3834053 R 554290 CDS YP_002144290.1 197364653 complement(3834913..3835803) 1 NC_011147.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 3835803 pstA 554290003700 pstA Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate transporter permease subunit PtsA YP_002144290.1 3834913 R 554290 CDS YP_002144291.1 197364654 complement(3835803..3836762) 1 NC_011147.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 3836762 pstC 554290003701 pstC Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate transporter permease subunit PstC YP_002144291.1 3835803 R 554290 CDS YP_002144292.1 197364655 complement(3836898..3837938) 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein 3837938 554290003702 SSPA3453 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate ABC transporter substrate-binding protein YP_002144292.1 3836898 R 554290 CDS YP_002144293.2 449784997 3838489..3839583 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3839583 554290003703 SSPA3454 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144293.2 3838489 D 554290 CDS YP_002144294.1 197364657 complement(3839733..3841562) 1 NC_011147.1 'Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source'; glucosamine--fructose-6-phosphate aminotransferase 3841562 554290003704 SSPA3455 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucosamine--fructose-6-phosphate aminotransferase YP_002144294.1 3839733 R 554290 CDS YP_002144295.1 197364658 complement(3841751..3843121) 1 NC_011147.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 3843121 glmU 554290003705 glmU Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_002144295.1 3841751 R 554290 CDS YP_002144296.1 197364659 complement(3843441..3844139) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3844139 554290003706 SSPA3457 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144296.1 3843441 R 554290 CDS YP_002144297.1 197364660 complement(3844369..3844788) 1 NC_011147.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 3844788 atpC 554290003707 atpC Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit epsilon YP_002144297.1 3844369 R 554290 CDS YP_002144298.1 197364661 complement(3844809..3846191) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 3846191 554290003708 SSPA3459 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit beta YP_002144298.1 3844809 R 554290 CDS YP_002144299.1 197364662 complement(3846218..3847081) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 3847081 554290003709 SSPA3460 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit gamma YP_002144299.1 3846218 R 554290 CDS YP_002144300.1 197364663 complement(3847132..3848673) 1 NC_011147.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 3848673 554290003710 SSPA3461 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit alpha YP_002144300.1 3847132 R 554290 CDS YP_002144301.1 197364664 complement(3848686..3849219) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 3849219 554290003711 SSPA3462 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit delta YP_002144301.1 3848686 R 554290 CDS YP_002144302.1 197364665 complement(3849234..3849704) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 3849704 554290003712 SSPA3463 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit B YP_002144302.1 3849234 R 554290 CDS YP_002144303.1 197364666 complement(3849764..3850003) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 3850003 554290003713 SSPA3464 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit C YP_002144303.1 3849764 R 554290 CDS YP_002144304.1 197364667 complement(3850050..3850865) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 3850865 554290003714 SSPA3465 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit A YP_002144304.1 3850050 R 554290 CDS YP_002144305.1 197364668 complement(3850874..3851254) 1 NC_011147.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 3851254 554290003715 SSPA3466 Salmonella enterica subsp. enterica serovar Paratyphi A str. F0F1 ATP synthase subunit I YP_002144305.1 3850874 R 554290 CDS YP_002144306.1 197364669 complement(3851870..3852493) 1 NC_011147.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 3852493 gidB 554290003716 gidB Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S rRNA methyltransferase GidB YP_002144306.1 3851870 R 554290 CDS YP_002144307.1 197364670 complement(3852596..3854485) 1 NC_011147.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 3854485 554290003717 SSPA3468 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002144307.1 3852596 R 554290 CDS YP_002144308.1 197364671 complement(3854864..3855307) 1 NC_011147.1 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group'; flavodoxin 3855307 554290003718 SSPA3469 Salmonella enterica subsp. enterica serovar Paratyphi A str. flavodoxin YP_002144308.1 3854864 R 554290 CDS YP_002144309.1 197364672 complement(3855397..3855855) 1 NC_011147.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 3855855 554290003719 SSPA3470 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator AsnC YP_002144309.1 3855397 R 554290 CDS YP_002144310.1 197364673 3856006..3856998 1 NC_011147.1 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 3856998 554290003720 SSPA3471 Salmonella enterica subsp. enterica serovar Paratyphi A str. asparagine synthetase AsnA YP_002144310.1 3856006 D 554290 CDS YP_002144311.1 197364674 complement(3857003..3858403) 1 NC_011147.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 3858403 yieM 554290003721 yieM Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144311.1 3857003 R 554290 CDS YP_002144312.1 197364675 complement(3858448..3859944) 1 NC_011147.1 'interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase'; regulatory ATPase RavA 3859944 554290003722 SSPA3473 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory ATPase RavA YP_002144312.1 3858448 R 554290 CDS YP_002144313.1 197364676 3860292..3862160 1 NC_011147.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 3862160 trkD 554290003723 trkD Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium transport protein Kup YP_002144313.1 3860292 D 554290 CDS YP_002144314.1 197364677 3862359..3862778 1 NC_011147.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 3862778 554290003724 SSPA3475 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-ribose pyranase YP_002144314.1 3862359 D 554290 CDS YP_002144315.1 197364678 3862786..3864291 1 NC_011147.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 3864291 554290003725 SSPA3476 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-ribose transporter ATP-binding protein YP_002144315.1 3862786 D 554290 CDS YP_002144316.1 197364679 3864297..3865262 1 NC_011147.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 3865262 rbsC 554290003726 rbsC Salmonella enterica subsp. enterica serovar Paratyphi A str. ribose ABC transporter permease YP_002144316.1 3864297 D 554290 CDS YP_002144317.1 197364680 3865287..3866177 1 NC_011147.1 periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 3866177 554290003727 SSPA3477 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-ribose transporter subunit RbsB YP_002144317.1 3865287 D 554290 CDS YP_002144318.1 197364681 3866310..3867239 1 NC_011147.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 3867239 554290003728 SSPA3478 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribokinase YP_002144318.1 3866310 D 554290 CDS YP_002144319.1 197364682 3867243..3868241 1 NC_011147.1 DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR 3868241 rbsR 554290003729 rbsR Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional repressor RbsR YP_002144319.1 3867243 D 554290 CDS YP_002144320.1 197364683 complement(3868207..3869634) 1 NC_011147.1 similar to Salmonella typhimurium MFS family tranport protein (1st mdule); MFS family tranport protein 3869634 554290003730 SSPA3479 Salmonella enterica subsp. enterica serovar Paratyphi A str. MFS family tranport protein YP_002144320.1 3868207 R 554290 CDS YP_002144321.1 197364684 complement(3869646..3870350) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region; hypothetical protein 3870350 554290003731 SSPA3480 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144321.1 3869646 R 554290 CDS YP_002144322.1 197364685 complement(3876161..3876997) 1 NC_011147.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 3876997 554290003738 SSPA3481 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator HdfR YP_002144322.1 3876161 R 554290 CDS YP_002144323.1 197364686 3877116..3877454 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3877454 554290003739 SSPA3482 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144323.1 3877116 D 554290 CDS YP_002144324.1 197364687 complement(3877562..3878020) 1 NC_011147.1 insertion sequence element IS200 transposase 3878020 554290003740 SSPA3483 Salmonella enterica subsp. enterica serovar Paratyphi A str. insertion sequence element IS200 transposase YP_002144324.1 3877562 R 554290 CDS YP_002144325.1 197364688 complement(3878274..3879710) 1 NC_011147.1 'similar to Salmonella typhimurium magnesium chelatase, subunit ChlI'; magnesium chelatase, subunit ChlI 3879710 554290003741 SSPA3484 Salmonella enterica subsp. enterica serovar Paratyphi A str. magnesium chelatase, subunit ChlI YP_002144325.1 3878274 R 554290 CDS YP_002144326.1 197364689 3880300..3881946 1 NC_011147.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 3881946 554290003742 SSPA3485 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetolactate synthase 2 catalytic subunit YP_002144326.1 3880300 D 554290 CDS YP_002144327.1 197364690 3881946..3882206 1 NC_011147.1 'similar to Salmonella typhi CT18 acetohydroxy acid synthase II, small subunit'; acetolactate synthase 2 regulatory subunit 3882206 ilvM 554290003743 ilvM Salmonella enterica subsp. enterica serovar Paratyphi A str. acetolactate synthase 2 regulatory subunit YP_002144327.1 3881946 D 554290 CDS YP_002144328.1 197364691 3882224..3883153 1 NC_011147.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3883153 554290003744 SSPA3487 Salmonella enterica subsp. enterica serovar Paratyphi A str. branched-chain amino acid aminotransferase YP_002144328.1 3882224 D 554290 CDS YP_002144329.1 197364692 3883310..3885160 1 NC_011147.1 'catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis'; dihydroxy-acid dehydratase 3885160 554290003745 SSPA3488 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydroxy-acid dehydratase YP_002144329.1 3883310 D 554290 CDS YP_002144330.1 197364693 3885163..3886707 1 NC_011147.1 'threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway'; threonine dehydratase 3886707 554290003746 SSPA3489 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonine dehydratase YP_002144330.1 3885163 D 554290 CDS YP_002144331.1 197364694 3886945..3887307 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3887307 554290003747 SSPA3490 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144331.1 3886945 D 554290 CDS YP_002144332.1 197364695 3887304..3887645 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3887645 554290003748 SSPA3491 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144332.1 3887304 D 554290 CDS YP_002144333.1 197364696 complement(3887648..3888535) 1 NC_011147.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 3888535 554290003749 SSPA3492 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator IlvY YP_002144333.1 3887648 R 554290 CDS YP_002144334.1 197364697 3888700..3890175 1 NC_011147.1 'catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis'; ketol-acid reductoisomerase 3890175 554290003750 SSPA3493 Salmonella enterica subsp. enterica serovar Paratyphi A str. ketol-acid reductoisomerase YP_002144334.1 3888700 D 554290 CDS YP_002144335.1 197364698 complement(3890267..3890548) 1 NC_011147.1 similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase C; peptidyl-prolyl cis-trans isomerase C 3890548 554290003751 SSPA3494 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-prolyl cis-trans isomerase C YP_002144335.1 3890267 R 554290 CDS YP_002144336.1 197364699 3891015..3891443 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3891443 554290003752 SSPA3495 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144336.1 3891015 D 554290 CDS YP_002144337.1 197364700 3891471..3892166 1 NC_011147.1 similar to Salmonella typhi CT18 probable uridine phosphorylase; uridine phosphorylase 3892166 554290003753 SSPA3496 Salmonella enterica subsp. enterica serovar Paratyphi A str. uridine phosphorylase YP_002144337.1 3891471 D 554290 CDS YP_002144338.1 197364701 3892166..3892894 1 NC_011147.1 similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein 3892894 554290003754 SSPA3497 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002144338.1 3892166 D 554290 CDS YP_002144339.1 197364702 3892994..3895018 1 NC_011147.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 3895018 554290003755 SSPA3498 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent DNA helicase Rep YP_002144339.1 3892994 D 554290 CDS YP_002144340.1 197364703 complement(3895058..3896539) 1 NC_011147.1 'catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation'; guanosine pentaphosphate phosphohydrolase 3896539 554290003756 SSPA3499 Salmonella enterica subsp. enterica serovar Paratyphi A str. guanosine pentaphosphate phosphohydrolase YP_002144340.1 3895058 R 554290 CDS YP_002144341.1 197364704 complement(3896658..3897923) 1 NC_011147.1 'enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation'; ATP-dependent RNA helicase RhlB 3897923 rhlB 554290003757 rhlB Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent RNA helicase RhlB YP_002144341.1 3896658 R 554290 CDS YP_002144342.1 197364705 3898067..3898396 1 NC_011147.1 similar to Salmonella typhi CT18 thioredoxin; thioredoxin 3898396 trxA 554290003758 trxA Salmonella enterica subsp. enterica serovar Paratyphi A str. thioredoxin YP_002144342.1 3898067 D 554290 CDS YP_002144343.1 197364706 3898815..3900074 1 NC_011147.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3900074 rho 554290003759 rho Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription termination factor Rho YP_002144343.1 3898815 D 554290 CDS YP_002144344.1 197364707 3900304..3901407 1 NC_011147.1 similar to Salmonella typhi CT18 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3901407 554290003760 SSPA3502 Salmonella enterica subsp. enterica serovar Paratyphi A str. undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase YP_002144344.1 3900304 D 554290 CDS YP_002144345.1 197364708 3901419..3902465 1 NC_011147.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 3902465 554290003761 SSPA3503 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide biosynthesis protein WzzE YP_002144345.1 3901419 D 554290 CDS YP_002144346.1 197364709 3902521..3903651 1 NC_011147.1 similar to Salmonella typhi CT18 UDP-N-acetyl-D-glucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase 3903651 554290003762 SSPA3504 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetyl-D-glucosamine 2-epimerase YP_002144346.1 3902521 D 554290 CDS YP_002144347.1 197364710 3903648..3904910 1 NC_011147.1 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 3904910 wecC 554290003763 wecC Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetyl-D-mannosamine dehydrogenase YP_002144347.1 3903648 D 554290 CDS YP_002144348.1 197364711 3904910..3905977 1 NC_011147.1 similar to Salmonella typhi CT18 UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase); dTDP-glucose 4,6-dehydratase 3905977 554290003764 SSPA3506 Salmonella enterica subsp. enterica serovar Paratyphi A str. dTDP-glucose 4,6-dehydratase YP_002144348.1 3904910 D 554290 CDS YP_002144349.1 197364712 3906010..3906891 1 NC_011147.1 similar to Salmonella typhi Ty2 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3906891 554290003765 SSPA3507 Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose-1-phosphate thymidylyltransferase YP_002144349.1 3906010 D 554290 CDS YP_002144350.2 449784998 3906869..3907546 1 NC_011147.1 similar to Salmonella typhi Ty2 lipopolysaccharide biosynthesis protein; TDP-fucosamine acetyltransferase 3907546 554290003766 SSPA3508 Salmonella enterica subsp. enterica serovar Paratyphi A str. TDP-fucosamine acetyltransferase YP_002144350.2 3906869 D 554290 CDS YP_002144351.1 197364714 3907551..3908681 1 NC_011147.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 3908681 554290003767 SSPA3509 Salmonella enterica subsp. enterica serovar Paratyphi A str. TDP-4-oxo-6-deoxy-D-glucose transaminase YP_002144351.1 3907551 D 554290 CDS YP_002144352.1 197364715 3908683..3909933 1 NC_011147.1 similar to Salmonella typhi CT18 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 3909933 554290003768 SSPA3510 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipopolysaccharide biosynthesis protein YP_002144352.1 3908683 D 554290 CDS YP_002144353.1 197364716 3909930..3911009 1 NC_011147.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 3911009 554290003769 SSPA3511 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-alpha-L-fucosyltransferase YP_002144353.1 3909930 D 554290 CDS YP_002144354.1 197364717 3911006..3912364 1 NC_011147.1 enterobacterial common antigen polymerase; common antigen polymerase 3912364 554290003770 SSPA3512 Salmonella enterica subsp. enterica serovar Paratyphi A str. common antigen polymerase YP_002144354.1 3911006 D 554290 CDS YP_002144355.1 197364718 3912361..3913101 1 NC_011147.1 similar to Salmonella typhi Ty2 probable UDP-N-acetyl-D-mannosaminuronic acid transferase; UDP-N-acetyl-D-mannosaminuronic acid transferase 3913101 554290003771 SSPA3513 Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetyl-D-mannosaminuronic acid transferase YP_002144355.1 3912361 D 554290 CDS YP_002144356.1 197364719 3913308..3914693 1 NC_011147.1 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter 3914693 554290003772 SSPA3514 Salmonella enterica subsp. enterica serovar Paratyphi A str. transporter YP_002144356.1 3913308 D 554290 CDS YP_002144357.2 449784999 complement(3915810..3917009) 1 NC_011147.1 similar to Salmonella typhi CT18 Porphyrin biosynthetic protein; protoheme IX biogenesis protein 3917009 554290003778 SSPA3515 Salmonella enterica subsp. enterica serovar Paratyphi A str. protoheme IX biogenesis protein YP_002144357.2 3915810 R 554290 CDS YP_002144358.1 197364721 complement(3917009..3918178) 1 NC_011147.1 similar to Salmonella typhi CT18 uroporphyrinogen III methylase; uroporphyrinogen III C-methyltransferase 3918178 554290003779 SSPA3516 Salmonella enterica subsp. enterica serovar Paratyphi A str. uroporphyrinogen III C-methyltransferase YP_002144358.1 3917009 R 554290 CDS YP_002144359.1 197364722 complement(3918200..3918895) 1 NC_011147.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 3918895 hemD 554290003780 hemD Salmonella enterica subsp. enterica serovar Paratyphi A str. uroporphyrinogen-III synthase YP_002144359.1 3918200 R 554290 CDS YP_002144360.1 197364723 complement(3918937..3919878) 1 NC_011147.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 3919878 hemC 554290003781 hemC Salmonella enterica subsp. enterica serovar Paratyphi A str. porphobilinogen deaminase YP_002144360.1 3918937 R 554290 CDS YP_002144361.1 197364724 3920255..3922801 1 NC_011147.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 3922801 cyaA 554290003782 cyaA Salmonella enterica subsp. enterica serovar Paratyphi A str. adenylate cyclase YP_002144361.1 3920255 D 554290 CDS YP_002144362.1 197364725 3922909..3923262 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3923262 554290003783 SSPA3520 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144362.1 3922909 D 554290 CDS YP_002144363.1 197364726 3923448..3923990 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3923990 554290003784 SSPA3521 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144363.1 3923448 D 554290 CDS YP_002144364.1 197364727 3924002..3924364 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3924364 554290003785 SSPA3522 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144364.1 3924002 D 554290 CDS YP_002144365.1 197364728 complement(3924435..3924755) 1 NC_011147.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 3924755 cyaY 554290003786 cyaY Salmonella enterica subsp. enterica serovar Paratyphi A str. frataxin-like protein YP_002144365.1 3924435 R 554290 CDS YP_002144366.1 197364729 complement(3924825..3925178) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3925178 554290003787 SSPA3524 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144366.1 3924825 R 554290 CDS YP_002144367.1 197364730 3925911..3926114 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 3926114 554290003789 SSPA3525 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144367.1 3925911 D 554290 CDS YP_002144368.1 197364731 3926151..3926975 1 NC_011147.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3926975 dapF 554290003790 dapF Salmonella enterica subsp. enterica serovar Paratyphi A str. diaminopimelate epimerase YP_002144368.1 3926151 D 554290 CDS YP_002144369.1 197364732 3926972..3927679 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3927679 554290003791 SSPA3527 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144369.1 3926972 D 554290 CDS YP_002144370.1 197364733 3927676..3928578 1 NC_011147.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3928578 xerC 554290003792 xerC Salmonella enterica subsp. enterica serovar Paratyphi A str. site-specific tyrosine recombinase XerC YP_002144370.1 3927676 D 554290 CDS YP_002144371.1 197364734 3928578..3929294 1 NC_011147.1 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 3929294 554290003793 SSPA3529 Salmonella enterica subsp. enterica serovar Paratyphi A str. flavin mononucleotide phosphatase YP_002144371.1 3928578 D 554290 CDS YP_002144372.1 197364735 3929430..3931592 1 NC_011147.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 3931592 uvrD 554290003794 uvrD Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-dependent helicase II YP_002144372.1 3929430 D 554290 CDS YP_002144373.1 197364736 3932064..3933014 1 NC_011147.1 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 3933014 554290003795 SSPA3531 Salmonella enterica subsp. enterica serovar Paratyphi A str. magnesium/nickel/cobalt transporter CorA YP_002144373.1 3932064 D 554290 CDS YP_002144374.1 197364737 complement(3933062..3933442) 1 NC_011147.1 hypothetical protein 3933442 554290003796 SSPA3532 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144374.1 3933062 R 554290 CDS YP_002144375.1 197364738 3933617..3933913 1 NC_011147.1 hypothetical protein 3933913 554290003797 SSPA3533 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144375.1 3933617 D 554290 CDS YP_002144376.1 197364739 complement(3933953..3934840) 1 NC_011147.1 similar to Salmonella typhi CT18 chloramphenicol-sensitive protein RarD; chloramphenicol-sensitive protein RarD 3934840 554290003798 SSPA3534 Salmonella enterica subsp. enterica serovar Paratyphi A str. chloramphenicol-sensitive protein RarD YP_002144376.1 3933953 R 554290 CDS YP_002144377.1 197364740 complement(3934884..3935351) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3935351 554290003799 SSPA3535 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144377.1 3934884 R 554290 CDS YP_002144378.2 449785000 3935516..3936385 1 NC_011147.1 catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 3936385 554290003800 SSPA3536 Salmonella enterica subsp. enterica serovar Paratyphi A str. phospholipase A YP_002144378.2 3935516 D 554290 CDS YP_002144379.1 197364742 3936469..3938298 1 NC_011147.1 'functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway'; ATP-dependent DNA helicase RecQ 3938298 554290003801 SSPA3537 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent DNA helicase RecQ YP_002144379.1 3936469 D 554290 CDS YP_002144380.1 197364743 3938362..3938982 1 NC_011147.1 similar to Salmonella typhi CT18 threonine efflux protein; threonine efflux system 3938982 554290003802 SSPA3538 Salmonella enterica subsp. enterica serovar Paratyphi A str. threonine efflux system YP_002144380.1 3938362 D 554290 CDS YP_002144381.1 197364744 complement(3939022..3939642) 1 NC_011147.1 similar to Salmonella typhi Ty2 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein 3939642 rhtB 554290003803 rhtB Salmonella enterica subsp. enterica serovar Paratyphi A str. homoserine/homoserine lactone efflux protein YP_002144381.1 3939022 R 554290 CDS YP_002144382.1 197364745 3939753..3940769 1 NC_011147.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 3940769 554290003804 SSPA3540 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysophospholipase L2 YP_002144382.1 3939753 D 554290 CDS YP_002144383.1 197364746 3940785..3941585 1 NC_011147.1 'purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium'; sugar phosphatase 3941585 554290003805 SSPA3541 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar phosphatase YP_002144383.1 3940785 D 554290 CDS YP_002144384.1 197364747 3941666..3942565 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3942565 554290003806 SSPA3542 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144384.1 3941666 D 554290 CDS YP_002144385.1 197364748 complement(3942453..3943406) 1 NC_011147.1 similar to Salmonella typhi CT18 trans-activator of metE and metH; trans-activator of metE and metH 3943406 554290003807 SSPA3543 Salmonella enterica subsp. enterica serovar Paratyphi A str. trans-activator of metE and metH YP_002144385.1 3942453 R 554290 CDS YP_002144386.1 197364749 3943655..3945919 1 NC_011147.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3945919 554290003808 SSPA3544 Salmonella enterica subsp. enterica serovar Paratyphi A str. 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_002144386.1 3943655 D 554290 CDS YP_002144387.1 197364750 3946263..3947606 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 3947606 554290003809 SSPA3545 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002144387.1 3946263 D 554290 CDS YP_002144388.1 197364751 complement(3947686..3948498) 1 NC_011147.1 similar to Salmonella typhi Ty2 hydrolase; hydrolase 3948498 554290003810 SSPA3546 Salmonella enterica subsp. enterica serovar Paratyphi A str. hydrolase YP_002144388.1 3947686 R 554290 CDS YP_002144389.1 197364752 3948757..3949518 1 NC_011147.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 3949518 554290003811 SSPA3547 Salmonella enterica subsp. enterica serovar Paratyphi A str. uridine phosphorylase YP_002144389.1 3948757 D 554290 CDS YP_002144390.1 197364753 3949658..3951088 1 NC_011147.1 YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; DNA recombination protein RmuC 3951088 554290003812 SSPA3548 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA recombination protein RmuC YP_002144390.1 3949658 D 554290 CDS YP_002144391.1 197364754 3951184..3951939 1 NC_011147.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 3951939 ubiE 554290003813 ubiE Salmonella enterica subsp. enterica serovar Paratyphi A str. ubiquinone/menaquinone biosynthesis methyltransferase YP_002144391.1 3951184 D 554290 CDS YP_002144392.1 197364755 3951949..3952554 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3952554 554290003814 SSPA3550 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144392.1 3951949 D 554290 CDS YP_002144393.1 197364756 3952551..3954191 1 NC_011147.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 3954191 ubiB 554290003815 ubiB Salmonella enterica subsp. enterica serovar Paratyphi A str. ubiquinone biosynthesis protein UbiB YP_002144393.1 3952551 D 554290 CDS YP_002144394.1 197364757 3954397..3954651 1 NC_011147.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3954651 tatA 554290003816 tatA Salmonella enterica subsp. enterica serovar Paratyphi A str. twin arginine translocase protein A YP_002144394.1 3954397 D 554290 CDS YP_002144395.1 197364758 3954655..3955203 1 NC_011147.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 3955203 554290003817 SSPA3553 Salmonella enterica subsp. enterica serovar Paratyphi A str. sec-independent translocase YP_002144395.1 3954655 D 554290 CDS YP_002144396.1 197364759 3955206..3955985 1 NC_011147.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 3955985 554290003818 SSPA3554 Salmonella enterica subsp. enterica serovar Paratyphi A str. twin-arginine protein translocation system subunit TatC YP_002144396.1 3955206 D 554290 CDS YP_002144397.1 197364760 3956027..3956809 1 NC_011147.1 magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 3956809 554290003819 SSPA3555 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNase TatD YP_002144397.1 3956027 D 554290 CDS YP_002144398.1 197364761 complement(3956817..3957305) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional activator; transcriptional activator RfaH 3957305 rfaH 554290003820 rfaH Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator RfaH YP_002144398.1 3956817 R 554290 CDS YP_002144399.1 197364762 3957491..3958969 1 NC_011147.1 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3958969 554290003821 SSPA3557 Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002144399.1 3957491 D 554290 CDS YP_002144400.1 197364763 3959055..3959756 1 NC_011147.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 3959756 fre 554290003822 fre Salmonella enterica subsp. enterica serovar Paratyphi A str. FMN reductase YP_002144400.1 3959055 D 554290 CDS YP_002144401.1 197364764 complement(3962050..3963213) 1 NC_011147.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 3963213 fadA 554290003824 fadA Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-ketoacyl-CoA thiolase YP_002144401.1 3962050 R 554290 CDS YP_002144402.1 197364765 complement(3963234..3965411) 1 NC_011147.1 'includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids'; multifunctional fatty acid oxidation complex subunit alpha 3965411 fadB 554290003825 fadB Salmonella enterica subsp. enterica serovar Paratyphi A str. multifunctional fatty acid oxidation complex subunit alpha YP_002144402.1 3963234 R 554290 CDS YP_002144403.1 197364766 3965601..3966932 1 NC_011147.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 3966932 554290003826 SSPA3561 Salmonella enterica subsp. enterica serovar Paratyphi A str. proline dipeptidase YP_002144403.1 3965601 D 554290 CDS YP_002144404.1 197364767 3966932..3967546 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3967546 554290003827 SSPA3562 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144404.1 3966932 D 554290 CDS YP_002144405.1 197364768 3967585..3969036 1 NC_011147.1 similar to Salmonella typhi CT18 trk system potassium uptake protein; potassium transporter 3969036 554290003828 SSPA3563 Salmonella enterica subsp. enterica serovar Paratyphi A str. potassium transporter YP_002144405.1 3967585 D 554290 CDS YP_002144406.1 197364769 3969048..3969593 1 NC_011147.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 3969593 hemG 554290003829 hemG Salmonella enterica subsp. enterica serovar Paratyphi A str. protoporphyrinogen oxidase YP_002144406.1 3969048 D 554290 CDS YP_002144407.1 197364770 complement(3975446..3975961) 1 NC_011147.1 in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein MobB 3975961 554290003835 SSPA3565 Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_002144407.1 3975446 R 554290 CDS YP_002144408.1 197364771 complement(3975958..3976542) 1 NC_011147.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3976542 mobA 554290003836 mobA Salmonella enterica subsp. enterica serovar Paratyphi A str. molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_002144408.1 3975958 R 554290 CDS YP_002144409.1 197364772 3976612..3976881 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3976881 554290003837 SSPA3567 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144409.1 3976612 D 554290 CDS YP_002144410.1 197364773 3976958..3977944 1 NC_011147.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 3977944 554290003838 SSPA3568 Salmonella enterica subsp. enterica serovar Paratyphi A str. serine/threonine protein kinase YP_002144410.1 3976958 D 554290 CDS YP_002144411.1 197364774 3977961..3978584 1 NC_011147.1 similar to Salmonella typhi CT18 thiol:disulfide interchange protein; protein disulfide isomerase I 3978584 554290003839 SSPA3569 Salmonella enterica subsp. enterica serovar Paratyphi A str. protein disulfide isomerase I YP_002144411.1 3977961 D 554290 CDS YP_002144412.1 197364775 complement(3978597..3979505) 1 NC_011147.1 similar to Salmonella typhi CT18 acyltransferase; acyltransferase 3979505 554290003840 SSPA3570 Salmonella enterica subsp. enterica serovar Paratyphi A str. acyltransferase YP_002144412.1 3978597 R 554290 CDS YP_002144413.1 197364776 3979893..3982679 1 NC_011147.1 'has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair'; DNA polymerase I 3982679 554290003841 SSPA3571 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase I YP_002144413.1 3979893 D 554290 CDS YP_002144414.1 197364777 complement(3983013..3983612) 1 NC_011147.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3983612 engB 554290003843 engB Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome biogenesis GTP-binding protein YsxC YP_002144414.1 3983013 R 554290 CDS YP_002144415.1 197364778 3983885..3984109 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3984109 554290003844 SSPA3573 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144415.1 3983885 D 554290 CDS YP_002144416.1 197364779 3984228..3984731 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3984731 554290003845 SSPA3574 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144416.1 3984228 D 554290 CDS YP_002144417.1 197364780 3984920..3986293 1 NC_011147.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3986293 554290003846 SSPA3575 Salmonella enterica subsp. enterica serovar Paratyphi A str. coproporphyrinogen III oxidase YP_002144417.1 3984920 D 554290 CDS YP_002144418.1 197364781 complement(3986606..3988015) 1 NC_011147.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 3988015 glnG 554290003847 glnG Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrogen regulation protein NR(I) YP_002144418.1 3986606 R 554290 CDS YP_002144419.1 197364782 complement(3988024..3989073) 1 NC_011147.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 3989073 glnL 554290003848 glnL Salmonella enterica subsp. enterica serovar Paratyphi A str. nitrogen regulation protein NR(II) YP_002144419.1 3988024 R 554290 CDS YP_002144420.1 197364783 complement(3989348..3990757) 1 NC_011147.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 3990757 glnA 554290003849 glnA Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamine synthetase YP_002144420.1 3989348 R 554290 CDS YP_002144421.1 197364784 complement(3990736..3991161) 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 3991161 554290003850 SSPA3579 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144421.1 3990736 R 554290 CDS YP_002144422.1 197364785 3991133..3992956 1 NC_011147.1 similar to Salmonella typhi CT18 GTP-binding protein; GTP-binding protein 3992956 554290003851 SSPA3580 Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP-binding protein YP_002144422.1 3991133 D 554290 CDS YP_002144423.1 197364786 complement(3993730..3994608) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3994608 554290003853 SSPA3582 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144423.1 3993730 R 554290 CDS YP_002144424.1 197364787 complement(3994605..3995846) 1 NC_011147.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3995846 554290003854 SSPA3583 Salmonella enterica subsp. enterica serovar Paratyphi A str. coproporphyrinogen III oxidase YP_002144424.1 3994605 R 554290 CDS YP_002144425.1 197364788 complement(3995848..3996723) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3996723 554290003855 SSPA3584 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144425.1 3995848 R 554290 CDS YP_002144426.1 197364789 complement(3996716..3997324) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3997324 554290003856 SSPA3585 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144426.1 3996716 R 554290 CDS YP_002144427.1 197364790 complement(3997754..3998602) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3998602 554290003857 SSPA3586 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144427.1 3997754 R 554290 CDS YP_002144428.1 197364791 complement(3998759..3999451) 1 NC_011147.1 porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall; specific substrate still unknown; outer membrane porin L 3999451 ompL 554290003858 ompL Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane porin L YP_002144428.1 3998759 R 554290 CDS YP_002144429.1 197364792 complement(3999519..4000940) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane permease; membrane permease 4000940 554290003859 SSPA3588 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane permease YP_002144429.1 3999519 R 554290 CDS YP_002144430.1 197364793 complement(4000986..4002368) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane permease; membrane permease 4002368 554290003860 SSPA3589 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane permease YP_002144430.1 4000986 R 554290 CDS YP_002144431.1 197364794 complement(4002414..4004450) 1 NC_011147.1 similar to Salmonella typhi CT18 glycosyl hydrolase; alpha-glucosidase 4004450 554290003861 SSPA3590 Salmonella enterica subsp. enterica serovar Paratyphi A str. alpha-glucosidase YP_002144431.1 4002414 R 554290 CDS YP_002144432.1 197364795 complement(4004494..4005351) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4005351 554290003862 SSPA3591 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144432.1 4004494 R 554290 CDS YP_002144433.1 197364796 complement(4005355..4006596) 1 NC_011147.1 similar to Salmonella typhimurium isomerase; isomerase 4006596 554290003863 SSPA3592 Salmonella enterica subsp. enterica serovar Paratyphi A str. isomerase YP_002144433.1 4005355 R 554290 CDS YP_002144434.1 197364797 complement(4006612..4007490) 1 NC_011147.1 similar to Salmonella typhi CT18 aldolase; aldolase 4007490 554290003864 SSPA3593 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldolase YP_002144434.1 4006612 R 554290 CDS YP_002144435.1 197364798 complement(4007513..4008409) 1 NC_011147.1 similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 4008409 554290003865 SSPA3594 Salmonella enterica subsp. enterica serovar Paratyphi A str. oxidoreductase YP_002144435.1 4007513 R 554290 CDS YP_002144436.1 197364799 4008564..4009460 1 NC_011147.1 similar to Salmonella typhi CT18 sugar kinase; sugar kinase 4009460 554290003866 SSPA3595 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar kinase YP_002144436.1 4008564 D 554290 CDS YP_002144437.1 197364800 4009494..4010297 1 NC_011147.1 similar to Salmonella typhi CT18 DeoR-family transcriptional regulator; DeoR-family transcriptional regulator 4010297 554290003867 SSPA3596 Salmonella enterica subsp. enterica serovar Paratyphi A str. DeoR-family transcriptional regulator YP_002144437.1 4009494 D 554290 CDS YP_002144438.1 197364801 4010488..4011087 1 NC_011147.1 similar to Salmonella typhi CT18 haloacid dehalogenase-like hydrolase; phosphatase 4011087 554290003868 SSPA3597 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatase YP_002144438.1 4010488 D 554290 CDS YP_002144439.1 197364802 4011946..4012383 1 NC_011147.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4012383 554290003870 SSPA3598 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-tyrosyl-tRNA(Tyr) deacylase YP_002144439.1 4011946 D 554290 CDS YP_002144440.1 197364803 4012380..4013369 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 4013369 554290003871 SSPA3599 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002144440.1 4012380 D 554290 CDS YP_002144441.1 197364804 complement(4013384..4013830) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4013830 554290003872 SSPA3600 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144441.1 4013384 R 554290 CDS YP_002144442.1 197364805 complement(4013781..4014137) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4014137 554290003873 SSPA3601 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144442.1 4013781 R 554290 CDS YP_002144443.1 197364806 complement(4014223..4015152) 1 NC_011147.1 similar to Salmonella typhi CT18 lipase; lipase 4015152 554290003874 SSPA3602 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipase YP_002144443.1 4014223 R 554290 CDS YP_002144444.1 197364807 4015357..4015599 1 NC_011147.1 similar to Salmonella typhi Ty2 CopG-family DNA-binding protein; CopG-family DNA-binding protein 4015599 554290003875 SSPA3603 Salmonella enterica subsp. enterica serovar Paratyphi A str. CopG-family DNA-binding protein YP_002144444.1 4015357 D 554290 CDS YP_002144445.1 197364808 4015599..4015973 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4015973 554290003876 SSPA3604 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144445.1 4015599 D 554290 CDS YP_002144446.1 197364809 complement(4016011..4016940) 1 NC_011147.1 required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 4016940 554290003877 SSPA3605 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate dehydrogenase accessory protein FdhE YP_002144446.1 4016011 R 554290 CDS YP_002144447.1 197364810 complement(4016937..4017572) 1 NC_011147.1 cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma 4017572 554290003878 SSPA3606 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate dehydrogenase-O subunit gamma YP_002144447.1 4016937 R 554290 CDS YP_002144448.1 197364811 complement(4017569..4018471) 1 NC_011147.1 similar to Salmonella typhi CT18 formate dehydrogenase-O beta subunit; formate dehydrogenase-O subunit beta 4018471 554290003879 SSPA3607 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate dehydrogenase-O subunit beta YP_002144448.1 4017569 R 554290 CDS YP_002144449.1 197364812 4021724..4022560 1 NC_011147.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 4022560 554290003881 SSPA3608 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate dehydrogenase accessory protein YP_002144449.1 4021724 D 554290 CDS YP_002144450.1 197364813 complement(4022828..4023859) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4023859 554290003882 SSPA3609 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144450.1 4022828 R 554290 CDS YP_002144451.1 197364814 4024041..4025141 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4025141 554290003883 SSPA3610 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144451.1 4024041 D 554290 CDS YP_002144452.1 197364815 complement(4025497..4025820) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 4025820 554290003884 SSPA3611 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144452.1 4025497 R 554290 CDS YP_002144453.1 197364816 complement(4025820..4026479) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4026479 554290003885 SSPA3612 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144453.1 4025820 R 554290 CDS YP_002144454.1 197364817 4026562..4027128 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 4027128 554290003886 SSPA3613 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding protein YP_002144454.1 4026562 D 554290 CDS YP_002144455.1 197364818 complement(4027217..4027531) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4027531 554290003887 SSPA3614 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144455.1 4027217 R 554290 CDS YP_002144456.1 197364819 complement(4027528..4028676) 1 NC_011147.1 similar to Salmonella typhi CT18 alcohol dehydrogenase; alcohol dehydrogenase 4028676 554290003888 SSPA3615 Salmonella enterica subsp. enterica serovar Paratyphi A str. alcohol dehydrogenase YP_002144456.1 4027528 R 554290 CDS YP_002144457.1 197364820 complement(4028803..4029630) 1 NC_011147.1 similar to Salmonella typhimurium rhamnulose-1-phosphate aldolase; rhamnulose-1-phosphate aldolase 4029630 554290003889 SSPA3616 Salmonella enterica subsp. enterica serovar Paratyphi A str. rhamnulose-1-phosphate aldolase YP_002144457.1 4028803 R 554290 CDS YP_002144458.1 197364821 complement(4029773..4031032) 1 NC_011147.1 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 4031032 554290003890 SSPA3617 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-rhamnose isomerase YP_002144458.1 4029773 R 554290 CDS YP_002144459.1 197364822 complement(4031029..4032498) 1 NC_011147.1 catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase 4032498 rhaB 554290003891 rhaB Salmonella enterica subsp. enterica serovar Paratyphi A str. rhamnulokinase YP_002144459.1 4031029 R 554290 CDS YP_002144460.1 197364823 4032786..4033622 1 NC_011147.1 activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 4033622 554290003892 SSPA3619 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator RhaS YP_002144460.1 4032786 D 554290 CDS YP_002144461.1 197364824 4033775..4034623 1 NC_011147.1 activates the expression of rhaRS in response to L-rhamnose; transcriptional activator RhaR 4034623 554290003893 SSPA3620 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional activator RhaR YP_002144461.1 4033775 D 554290 CDS YP_002144462.1 197364825 complement(4034620..4035654) 1 NC_011147.1 transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter 4035654 554290003894 SSPA3621 Salmonella enterica subsp. enterica serovar Paratyphi A str. rhamnose-proton symporter YP_002144462.1 4034620 R 554290 CDS YP_002144463.1 197364826 4036285..4036956 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4036956 554290003895 SSPA3622 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144463.1 4036285 D 554290 CDS YP_002144464.1 197364827 complement(4037113..4038420) 1 NC_011147.1 similar to Salmonella typhi CT18 possible integral membrane transport protein; integral membrane transport protein 4038420 554290003896 SSPA3623 Salmonella enterica subsp. enterica serovar Paratyphi A str. integral membrane transport protein YP_002144464.1 4037113 R 554290 CDS YP_002144465.1 197364828 complement(4038413..4038928) 1 NC_011147.1 similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein 4038928 554290003897 SSPA3624 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane transport protein YP_002144465.1 4038413 R 554290 CDS YP_002144466.1 197364829 complement(4038947..4039930) 1 NC_011147.1 similar to Salmonella typhimurium dicarboxylate-binding periplasmic protein; dicarboxylate-binding periplasmic protein 4039930 554290003898 SSPA3625 Salmonella enterica subsp. enterica serovar Paratyphi A str. dicarboxylate-binding periplasmic protein YP_002144466.1 4038947 R 554290 CDS YP_002144467.1 197364830 4040259..4040879 1 NC_011147.1 SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase 4040879 554290003899 SSPA3626 Salmonella enterica subsp. enterica serovar Paratyphi A str. superoxide dismutase YP_002144467.1 4040259 D 554290 CDS YP_002144468.2 449785001 4040949..4041638 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4041638 554290003900 SSPA3627 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144468.2 4040949 D 554290 CDS YP_002144469.1 197364832 4041650..4042045 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4042045 554290003901 SSPA3628 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144469.1 4041650 D 554290 CDS YP_002144470.1 197364833 complement(4042096..4043469) 1 NC_011147.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 4043469 cpxA 554290003902 cpxA Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component sensor protein YP_002144470.1 4042096 R 554290 CDS YP_002144471.1 197364834 complement(4043466..4044164) 1 NC_011147.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 4044164 554290003903 SSPA3630 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator CpxR YP_002144471.1 4043466 R 554290 CDS YP_002144472.1 197364835 4044315..4044815 1 NC_011147.1 repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; repressor CpxP 4044815 cpxP 554290003904 cpxP Salmonella enterica subsp. enterica serovar Paratyphi A str. repressor CpxP YP_002144472.1 4044315 D 554290 CDS YP_002144473.1 197364836 4044964..4045866 1 NC_011147.1 'member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers'; ferrous iron efflux protein F 4045866 fieF 554290003905 fieF Salmonella enterica subsp. enterica serovar Paratyphi A str. ferrous iron efflux protein F YP_002144473.1 4044964 D 554290 CDS YP_002144474.1 197364837 4046051..4047013 1 NC_011147.1 'catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis'; 6-phosphofructokinase 4047013 554290003906 SSPA3633 Salmonella enterica subsp. enterica serovar Paratyphi A str. 6-phosphofructokinase YP_002144474.1 4046051 D 554290 CDS YP_002144475.1 197364838 4047217..4048206 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic sulphate binding protein; sulfate transporter subunit 4048206 554290003907 SSPA3634 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfate transporter subunit YP_002144475.1 4047217 D 554290 CDS YP_002144476.1 197364839 4048307..4049062 1 NC_011147.1 similar to Salmonella typhi Ty2 CDP-diglyceride hydrolase; CDP-diacylglycerol pyrophosphatase 4049062 554290003908 SSPA3635 Salmonella enterica subsp. enterica serovar Paratyphi A str. CDP-diacylglycerol pyrophosphatase YP_002144476.1 4048307 D 554290 CDS YP_002144477.1 197364840 4050672..4051631 1 NC_011147.1 phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase 4051631 554290003910 SSPA3637 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminoimidazole riboside kinase YP_002144477.1 4050672 D 554290 CDS YP_002144478.1 197364841 4051641..4052681 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4052681 554290003911 SSPA3638 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144478.1 4051641 D 554290 CDS YP_002144479.1 197364842 4052735..4053466 1 NC_011147.1 similar to Salmonella typhi CT18 GntR-family regulatory protein; GntR family transcriptional regulator 4053466 554290003912 SSPA3639 Salmonella enterica subsp. enterica serovar Paratyphi A str. GntR family transcriptional regulator YP_002144479.1 4052735 D 554290 CDS YP_002144480.1 197364843 complement(4053971..4054321) 1 NC_011147.1 hypothetical protein 4054321 554290003914 SSPA3642 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144480.1 4053971 R 554290 CDS YP_002144481.1 197364844 complement(4054335..4055927) 1 NC_011147.1 similar to Salmonella typhi CT18 sugar kinase; autoinducer-2 (AI-2) kinase 4055927 554290003915 SSPA3643 Salmonella enterica subsp. enterica serovar Paratyphi A str. autoinducer-2 (AI-2) kinase YP_002144481.1 4054335 R 554290 CDS YP_002144482.1 197364845 complement(4056016..4056975) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 4056975 554290003916 SSPA3644 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002144482.1 4056016 R 554290 CDS YP_002144483.1 197364846 4057231..4058766 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 4058766 554290003917 SSPA3645 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002144483.1 4057231 D 554290 CDS YP_002144484.1 197364847 4058760..4059803 1 NC_011147.1 similar to Salmonella typhi CT18 ABC transporter permease protein; ABC transporter permease 4059803 554290003918 SSPA3646 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter permease YP_002144484.1 4058760 D 554290 CDS YP_002144485.1 197364848 4059803..4060801 1 NC_011147.1 'similar to Salmonella typhi CT18 ABC transporter, membrane component'; ABC transporter membrane protein 4060801 554290003919 SSPA3647 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter membrane protein YP_002144485.1 4059803 D 554290 CDS YP_002144486.1 197364849 4060830..4061852 1 NC_011147.1 'similar to Salmonella typhi CT18 ABC transport protein, solute-binding component'; ABC transporter substrate-binding protein 4061852 554290003920 SSPA3648 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter substrate-binding protein YP_002144486.1 4060830 D 554290 CDS YP_002144487.1 197364850 4061881..4062756 1 NC_011147.1 similar to Salmonella typhi CT18 aldolase; aldolase 4062756 554290003921 SSPA3649 Salmonella enterica subsp. enterica serovar Paratyphi A str. aldolase YP_002144487.1 4061881 D 554290 CDS YP_002144488.1 197364851 4062800..4063129 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; autoinducer-2 (AI-2) modifying protein LsrG 4063129 554290003922 SSPA3650 Salmonella enterica subsp. enterica serovar Paratyphi A str. autoinducer-2 (AI-2) modifying protein LsrG YP_002144488.1 4062800 D 554290 CDS YP_002144489.1 197364852 4063139..4063903 1 NC_011147.1 similar to Salmonella typhi CT18 ribulose-phosphate 3-epimerase; epimerase 4063903 554290003923 SSPA3651 Salmonella enterica subsp. enterica serovar Paratyphi A str. epimerase YP_002144489.1 4063139 D 554290 CDS YP_002144490.1 197364853 complement(4063995..4064762) 1 NC_011147.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4064762 tpiA 554290003924 tpiA Salmonella enterica subsp. enterica serovar Paratyphi A str. triosephosphate isomerase YP_002144490.1 4063995 R 554290 CDS YP_002144491.1 197364854 complement(4064875..4065471) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4065471 554290003925 SSPA3653 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144491.1 4064875 R 554290 CDS YP_002144492.1 197364855 complement(4066109..4066855) 1 NC_011147.1 similar to Salmonella typhi CT18 ferredoxin--NADP reductase; ferredoxin-NADP reductase 4066855 554290003927 SSPA3654 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferredoxin-NADP reductase YP_002144492.1 4066109 R 554290 CDS YP_002144493.2 449785002 complement(4066952..4067962) 1 NC_011147.1 'type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese'; fructose 1,6-bisphosphatase II 4067962 glpX 554290003928 glpX Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose 1,6-bisphosphatase II YP_002144493.2 4066952 R 554290 CDS YP_002144494.1 197364857 complement(4068074..4069582) 1 NC_011147.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase 4069582 glpK 554290003929 glpK Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol kinase YP_002144494.1 4068074 R 554290 CDS YP_002144495.1 197364858 complement(4069603..4070448) 1 NC_011147.1 similar to Salmonella typhi CT18 glycerol uptake facilitator protein; glycerol uptake facilitator protein 4070448 554290003930 SSPA3657 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol uptake facilitator protein YP_002144495.1 4069603 R 554290 CDS YP_002144496.1 197364859 4070847..4071086 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4071086 554290003931 SSPA3658 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144496.1 4070847 D 554290 CDS YP_002144497.1 197364860 complement(4071308..4071793) 1 NC_011147.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 4071793 554290003932 SSPA3659 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribonuclease activity regulator protein RraA YP_002144497.1 4071308 R 554290 CDS YP_002144498.1 197364861 complement(4071886..4072815) 1 NC_011147.1 'catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate'; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4072815 554290003933 SSPA3660 Salmonella enterica subsp. enterica serovar Paratyphi A str. 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_002144498.1 4071886 R 554290 CDS YP_002144499.1 197364862 complement(4072882..4074213) 1 NC_011147.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 4074213 hslU 554290003934 hslU Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent protease ATP-binding subunit HslU YP_002144499.1 4072882 R 554290 CDS YP_002144500.1 197364863 complement(4074223..4074753) 1 NC_011147.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 4074753 554290003935 SSPA3662 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATP-dependent protease peptidase subunit YP_002144500.1 4074223 R 554290 CDS YP_002144501.1 197364864 complement(4074845..4075816) 1 NC_011147.1 similar to Salmonella typhi CT18 cell division protein; cell division protein FtsN 4075816 554290003936 SSPA3663 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein FtsN YP_002144501.1 4074845 R 554290 CDS YP_002144502.1 197364865 complement(4075910..4076935) 1 NC_011147.1 'negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins'; DNA-binding transcriptional regulator CytR 4076935 554290003937 SSPA3664 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator CytR YP_002144502.1 4075910 R 554290 CDS YP_002144503.1 197364866 complement(4077090..4079288) 1 NC_011147.1 'binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity'; primosome assembly protein PriA 4079288 554290003938 SSPA3665 Salmonella enterica subsp. enterica serovar Paratyphi A str. primosome assembly protein PriA YP_002144503.1 4077090 R 554290 CDS YP_002144504.1 197364867 4079492..4079704 1 NC_011147.1 'RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome'; 50S ribosomal protein L31 4079704 rpmE 554290003939 rpmE Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L31 YP_002144504.1 4079492 D 554290 CDS YP_002144505.1 197364868 complement(4079749..4080411) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4080411 554290003940 SSPA3667 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144505.1 4079749 R 554290 CDS YP_002144506.1 197364869 complement(4080612..4082402) 1 NC_011147.1 similar to |6019467|gb|AAF02094.1| arylsulfotransferase [Pseudomonas putida]; hypothetical protein 4082402 554290003941 SSPA3668 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144506.1 4080612 R 554290 CDS YP_002144507.1 197364870 complement(4082858..4083175) 1 NC_011147.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 4083175 554290003942 SSPA3669 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional repressor protein MetJ YP_002144507.1 4082858 R 554290 CDS YP_002144508.1 197364871 4083440..4084600 1 NC_011147.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 4084600 554290003943 SSPA3670 Salmonella enterica subsp. enterica serovar Paratyphi A str. cystathionine gamma-synthase YP_002144508.1 4083440 D 554290 CDS YP_002144509.1 197364872 4084603..4087035 1 NC_011147.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 4087035 metL 554290003944 metL Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional aspartate kinase II/homoserine dehydrogenase II YP_002144509.1 4084603 D 554290 CDS YP_002144510.1 197364873 complement(4087151..4088008) 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 4088008 554290003945 SSPA3672 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144510.1 4087151 R 554290 CDS YP_002144511.1 197364874 complement(4089244..4090368) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4090368 554290003946 SSPA3673 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144511.1 4089244 R 554290 CDS YP_002144512.1 197364875 4090504..4092060 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4092060 554290003947 SSPA3674 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144512.1 4090504 D 554290 CDS YP_002144513.1 197364876 4093561..4094667 1 NC_011147.1 similar to Salmonella typhi CT18 alanine racemase; alanine racemase 4094667 554290003949 SSPA3675 Salmonella enterica subsp. enterica serovar Paratyphi A str. alanine racemase YP_002144513.1 4093561 D 554290 CDS YP_002144514.1 197364877 complement(4094612..4096093) 1 NC_011147.1 similar to Salmonella typhi CT18 GntR-family regulatory protein; GntR family transcriptional regulator 4096093 554290003950 SSPA3676 Salmonella enterica subsp. enterica serovar Paratyphi A str. GntR family transcriptional regulator YP_002144514.1 4094612 R 554290 CDS YP_002144515.1 197364878 4096372..4097262 1 NC_011147.1 'MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor'; 5,10-methylenetetrahydrofolate reductase 4097262 metF 554290003951 metF Salmonella enterica subsp. enterica serovar Paratyphi A str. 5,10-methylenetetrahydrofolate reductase YP_002144515.1 4096372 D 554290 CDS YP_002144516.1 197364879 4097427..4099607 1 NC_011147.1 similar to Salmonella typhi CT18 catalase (hydroperoxidase I); catalase 4099607 554290003952 SSPA3678 Salmonella enterica subsp. enterica serovar Paratyphi A str. catalase YP_002144516.1 4097427 D 554290 CDS YP_002144517.1 197364880 complement(4099714..4100817) 1 NC_011147.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 4100817 gldA 554290003953 gldA Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol dehydrogenase YP_002144517.1 4099714 R 554290 CDS YP_002144518.1 197364881 complement(4100829..4101491) 1 NC_011147.1 similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 4101491 554290003954 SSPA3680 Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose-6-phosphate aldolase YP_002144518.1 4100829 R 554290 CDS YP_002144519.1 197364882 complement(4101746..4102582) 1 NC_011147.1 similar to Salmonella typhi CT18 AraC-family transcriptional regulator; AraC family transcriptional regulator 4102582 554290003955 SSPA3681 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC family transcriptional regulator YP_002144519.1 4101746 R 554290 CDS YP_002144520.1 197364883 complement(4102743..4104476) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4104476 554290003956 SSPA3682 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144520.1 4102743 R 554290 CDS YP_002144521.1 197364884 complement(4104689..4107340) 1 NC_011147.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 4107340 554290003957 SSPA3683 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoenolpyruvate carboxylase YP_002144521.1 4104689 R 554290 CDS YP_002144522.1 197364885 complement(4107709..4108860) 1 NC_011147.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 4108860 554290003958 SSPA3684 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetylornithine deacetylase YP_002144522.1 4107709 R 554290 CDS YP_002144523.1 197364886 4108949..4109953 1 NC_011147.1 'catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate'; N-acetyl-gamma-glutamyl-phosphate reductase 4109953 argC 554290003959 argC Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetyl-gamma-glutamyl-phosphate reductase YP_002144523.1 4108949 D 554290 CDS YP_002144524.1 197364887 4109964..4110737 1 NC_011147.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 4110737 554290003960 SSPA3686 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetylglutamate kinase YP_002144524.1 4109964 D 554290 CDS YP_002144525.1 197364888 4110855..4112231 1 NC_011147.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 4112231 554290003961 SSPA3687 Salmonella enterica subsp. enterica serovar Paratyphi A str. argininosuccinate lyase YP_002144525.1 4110855 D 554290 CDS YP_002144526.1 197364889 4112516..4113433 1 NC_011147.1 'Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA'; DNA-binding transcriptional regulator OxyR 4113433 554290003963 SSPA3688 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator OxyR YP_002144526.1 4112516 D 554290 CDS YP_002144527.1 197364890 complement(4113416..4114816) 1 NC_011147.1 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 4114816 554290003964 SSPA3689 Salmonella enterica subsp. enterica serovar Paratyphi A str. soluble pyridine nucleotide transhydrogenase YP_002144527.1 4113416 R 554290 CDS YP_002144528.1 197364891 4115018..4115650 1 NC_011147.1 'negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis'; DNA-binding transcriptional repressor FabR 4115650 554290003965 SSPA3690 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor FabR YP_002144528.1 4115018 D 554290 CDS YP_002144529.1 197364892 4115666..4116025 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4116025 554290003966 SSPA3691 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144529.1 4115666 D 554290 CDS YP_002144530.1 197364893 complement(4116072..4117172) 1 NC_011147.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 4117172 554290003967 SSPA3692 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA (uracil-5-)-methyltransferase YP_002144530.1 4116072 R 554290 CDS YP_002144531.1 197364894 4117546..4119390 1 NC_011147.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 4119390 btuB 554290003968 btuB Salmonella enterica subsp. enterica serovar Paratyphi A str. vitamin B12/cobalamin outer membrane transporter YP_002144531.1 4117546 D 554290 CDS YP_002144532.1 197364895 4119335..4120186 1 NC_011147.1 'converts L-glutamate to D-glutamate, a component of peptidoglycan'; glutamate racemase 4120186 554290003969 SSPA3694 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate racemase YP_002144532.1 4119335 D 554290 CDS YP_002144533.1 197364896 4125988..4127016 1 NC_011147.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 4127016 murB 554290003975 murB Salmonella enterica subsp. enterica serovar Paratyphi A str. UDP-N-acetylenolpyruvoylglucosamine reductase YP_002144533.1 4125988 D 554290 CDS YP_002144534.1 197364897 4127013..4127975 1 NC_011147.1 'catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon'; biotin--protein ligase 4127975 554290003976 SSPA3696 Salmonella enterica subsp. enterica serovar Paratyphi A str. biotin--protein ligase YP_002144534.1 4127013 D 554290 CDS YP_002144535.1 197364898 complement(4128010..4128960) 1 NC_011147.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 4128960 554290003977 SSPA3697 Salmonella enterica subsp. enterica serovar Paratyphi A str. pantothenate kinase YP_002144535.1 4128010 R 554290 CDS YP_002144536.1 197364899 complement(4129169..4129342) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4129342 554290003978 SSPA3698 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144536.1 4129169 R 554290 CDS YP_002144537.1 197364900 4129919..4131103 1 NC_011147.1 'EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu'; elongation factor Tu 4131103 554290003983 SSPA3699 Salmonella enterica subsp. enterica serovar Paratyphi A str. elongation factor Tu YP_002144537.1 4129919 D 554290 CDS YP_002144538.1 197364901 4131333..4131716 1 NC_011147.1 'forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force'; preprotein translocase subunit SecE 4131716 secE 554290003984 secE Salmonella enterica subsp. enterica serovar Paratyphi A str. preprotein translocase subunit SecE YP_002144538.1 4131333 D 554290 CDS YP_002144539.1 197364902 4131718..4132263 1 NC_011147.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 4132263 nusG 554290003985 nusG Salmonella enterica subsp. enterica serovar Paratyphi A str. transcription antitermination protein NusG YP_002144539.1 4131718 D 554290 CDS YP_002144540.1 197364903 4132421..4132849 1 NC_011147.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4132849 rplK 554290003986 rplK Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L11 YP_002144540.1 4132421 D 554290 CDS YP_002144541.1 197364904 4132853..4133557 1 NC_011147.1 'in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA'; 50S ribosomal protein L1 4133557 rplA 554290003987 rplA Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L1 YP_002144541.1 4132853 D 554290 CDS YP_002144542.1 197364905 4133973..4134470 1 NC_011147.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4134470 rplJ 554290003988 rplJ Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L10 YP_002144542.1 4133973 D 554290 CDS YP_002144543.1 197364906 4134537..4134902 1 NC_011147.1 'present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors'; 50S ribosomal protein L7/L12 4134902 rplL 554290003989 rplL Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L7/L12 YP_002144543.1 4134537 D 554290 CDS YP_002144544.1 197364907 4135220..4139248 1 NC_011147.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4139248 rpoB 554290003990 rpoB Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-directed RNA polymerase subunit beta YP_002144544.1 4135220 D 554290 CDS YP_002144545.1 197364908 4139325..4143548 1 NC_011147.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4143548 554290003991 SSPA3707 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-directed RNA polymerase subunit beta' YP_002144545.1 4139325 D 554290 CDS YP_002144546.1 197364909 4143635..4143916 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 4143916 554290003992 SSPA3708 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144546.1 4143635 D 554290 CDS YP_002144547.1 197364910 complement(4143918..4144355) 1 NC_011147.1 similar to |16121067|ref|NP_404380.1| hypothetical protein [Yersinia pestis]; hypothetical protein 4144355 554290003993 SSPA3709 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144547.1 4143918 R 554290 CDS YP_002144548.1 197364911 4144676..4144864 1 NC_011147.1 similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 4144864 554290003994 SSPA3710 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144548.1 4144676 D 554290 CDS YP_002144549.1 197364912 complement(4145015..4146148) 1 NC_011147.1 'in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center'; thiamine biosynthesis protein ThiH 4146148 thiH 554290003995 thiH Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine biosynthesis protein ThiH YP_002144549.1 4145015 R 554290 CDS YP_002144550.1 197364913 complement(4146145..4146915) 1 NC_011147.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 4146915 thiG 554290003996 thiG Salmonella enterica subsp. enterica serovar Paratyphi A str. thiazole synthase YP_002144550.1 4146145 R 554290 CDS YP_002144551.1 197364914 complement(4146917..4147117) 1 NC_011147.1 'with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate'; sulfur carrier protein ThiS 4147117 554290003997 SSPA3713 Salmonella enterica subsp. enterica serovar Paratyphi A str. sulfur carrier protein ThiS YP_002144551.1 4146917 R 554290 CDS YP_002144552.1 197364915 complement(4147098..4147856) 1 NC_011147.1 similar to Salmonella typhi CT18 thiamine biosynthesis protein; thiamine biosynthesis protein 4147856 554290003998 SSPA3714 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine biosynthesis protein YP_002144552.1 4147098 R 554290 CDS YP_002144553.1 197364916 complement(4147849..4148484) 1 NC_011147.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 4148484 554290003999 SSPA3715 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine-phosphate pyrophosphorylase YP_002144553.1 4147849 R 554290 CDS YP_002144554.1 197364917 complement(4148484..4150379) 1 NC_011147.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 4150379 554290004000 SSPA3716 Salmonella enterica subsp. enterica serovar Paratyphi A str. thiamine biosynthesis protein ThiC YP_002144554.1 4148484 R 554290 CDS YP_002144555.1 197364918 complement(4150743..4151231) 1 NC_011147.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 4151231 554290004001 SSPA3717 Salmonella enterica subsp. enterica serovar Paratyphi A str. anti-RNA polymerase sigma 70 factor YP_002144555.1 4150743 R 554290 CDS YP_002144556.1 197364919 4151324..4152097 1 NC_011147.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 4152097 nudC 554290004002 nudC Salmonella enterica subsp. enterica serovar Paratyphi A str. NADH pyrophosphatase YP_002144556.1 4151324 D 554290 CDS YP_002144557.1 197364920 4152138..4153202 1 NC_011147.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4153202 hemE 554290004003 hemE Salmonella enterica subsp. enterica serovar Paratyphi A str. uroporphyrinogen decarboxylase YP_002144557.1 4152138 D 554290 CDS YP_002144558.1 197364921 4153212..4153883 1 NC_011147.1 'Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures'; endonuclease V 4153883 554290004004 SSPA3720 Salmonella enterica subsp. enterica serovar Paratyphi A str. endonuclease V YP_002144558.1 4153212 D 554290 CDS YP_002144559.1 197364922 4153925..4154515 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4154515 554290004005 SSPA3721 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144559.1 4153925 D 554290 CDS YP_002144560.1 197364923 4154702..4154974 1 NC_011147.1 histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 4154974 554290004006 SSPA3722 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator HU subunit alpha YP_002144560.1 4154702 D 554290 CDS YP_002144561.1 197364924 4155022..4155678 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4155678 554290004007 SSPA3723 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144561.1 4155022 D 554290 CDS YP_002144562.1 197364925 complement(4155720..4156175) 1 NC_011147.1 similar to Salmonella typhi CT18 possible exported protein; zinc resistance protein 4156175 zraP 554290004008 zraP Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc resistance protein YP_002144562.1 4155720 R 554290 CDS YP_002144563.1 197364926 4156429..4157826 1 NC_011147.1 similar to Salmonella typhi CT18 two-component system sensor protein; sensor protein ZraS 4157826 554290004009 SSPA3725 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor protein ZraS YP_002144563.1 4156429 D 554290 CDS YP_002144564.1 197364927 4157832..4159157 1 NC_011147.1 DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; transcriptional regulatory protein ZraR 4159157 554290004010 SSPA3726 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulatory protein ZraR YP_002144564.1 4157832 D 554290 CDS YP_002144565.1 197364928 complement(4159154..4160443) 1 NC_011147.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 4160443 554290004011 SSPA3727 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoribosylamine--glycine ligase YP_002144565.1 4159154 R 554290 CDS YP_002144566.1 197364929 complement(4160455..4162044) 1 NC_011147.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4162044 purH 554290004012 purH Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002144566.1 4160455 R 554290 CDS YP_002144567.1 197364930 complement(4168016..4168453) 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; hypothetical protein 4168453 554290004017 SSPA3729 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144567.1 4168016 R 554290 CDS YP_002144568.1 197364931 4168610..4169539 1 NC_011147.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 4169539 554290004018 SSPA3730 Salmonella enterica subsp. enterica serovar Paratyphi A str. homoserine O-succinyltransferase YP_002144568.1 4168610 D 554290 CDS YP_002144569.1 197364932 4169808..4171409 1 NC_011147.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 4171409 554290004019 SSPA3731 Salmonella enterica subsp. enterica serovar Paratyphi A str. malate synthase YP_002144569.1 4169808 D 554290 CDS YP_002144570.1 197364933 4171441..4172745 1 NC_011147.1 similar to Salmonella typhi CT18 isocitrate lyase; isocitrate lyase 4172745 554290004020 SSPA3732 Salmonella enterica subsp. enterica serovar Paratyphi A str. isocitrate lyase YP_002144570.1 4171441 D 554290 CDS YP_002144571.1 197364934 complement(4174562..4174996) 1 NC_011147.1 hypothetical protein 4174996 554290004022 SSPA3733 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144571.1 4174562 R 554290 CDS YP_002144572.1 197364935 complement(4174980..4175804) 1 NC_011147.1 'regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase'; IclR family transcriptional regulator 4175804 554290004023 SSPA3734 Salmonella enterica subsp. enterica serovar Paratyphi A str. IclR family transcriptional regulator YP_002144572.1 4174980 R 554290 CDS YP_002144573.1 197364936 4176109..4179792 1 NC_011147.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4179792 metH 554290004024 metH Salmonella enterica subsp. enterica serovar Paratyphi A str. B12-dependent methionine synthase YP_002144573.1 4176109 D 554290 CDS YP_002144574.2 449785003 4180059..4181690 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4181690 554290004025 SSPA3736 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144574.2 4180059 D 554290 CDS YP_002144575.1 197364938 complement(4181766..4182455) 1 NC_011147.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 4182455 554290004026 SSPA3737 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidase E YP_002144575.1 4181766 R 554290 CDS YP_002144576.1 197364939 4182527..4182628 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4182628 554290004027 SSPA3738 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144576.1 4182527 D 554290 CDS YP_002144577.1 197364940 4182663..4183202 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4183202 554290004028 SSPA3739 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144577.1 4182663 D 554290 CDS YP_002144578.1 197364941 4183249..4184118 1 NC_011147.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 4184118 554290004029 SSPA3740 Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA pseudouridine synthase F YP_002144578.1 4183249 D 554290 CDS YP_002144579.1 197364942 complement(4184115..4184387) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4184387 554290004030 SSPA3741 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144579.1 4184115 R 554290 CDS YP_002144580.1 197364943 complement(4184450..4185208) 1 NC_011147.1 similar to Salmonella typhi CT18 deoR family regulatory protein; deoR family regulatory protein 4185208 554290004031 SSPA3742 Salmonella enterica subsp. enterica serovar Paratyphi A str. deoR family regulatory protein YP_002144580.1 4184450 R 554290 CDS YP_002144581.1 197364944 complement(4185195..4185920) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4185920 554290004032 SSPA3743 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144581.1 4185195 R 554290 CDS YP_002144582.1 197364945 complement(4186075..4186914) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4186914 554290004033 SSPA3744 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144582.1 4186075 R 554290 CDS YP_002144583.1 197364946 complement(4186938..4188416) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4188416 554290004034 SSPA3745 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144583.1 4186938 R 554290 CDS YP_002144584.1 197364947 complement(4188926..4190275) 1 NC_011147.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 4190275 554290004035 SSPA3746 Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate kinase III YP_002144584.1 4188926 R 554290 CDS YP_002144585.1 197364948 4190620..4192269 1 NC_011147.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4192269 pgi 554290004036 pgi Salmonella enterica subsp. enterica serovar Paratyphi A str. glucose-6-phosphate isomerase YP_002144585.1 4190620 D 554290 CDS YP_002144586.1 197364949 4192710..4192955 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4192955 554290004037 SSPA3748 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144586.1 4192710 D 554290 CDS YP_002144587.1 197364950 4193019..4193657 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4193657 554290004038 SSPA3749 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144587.1 4193019 D 554290 CDS YP_002144588.1 197364951 4193654..4194391 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4194391 554290004039 SSPA3750 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144588.1 4193654 D 554290 CDS YP_002144589.2 449785004 4194391..4196487 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4196487 554290004040 SSPA3751 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144589.2 4194391 D 554290 CDS YP_002144590.1 197364953 4196630..4197040 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; phosphate-starvation-inducible protein PsiE 4197040 554290004041 SSPA3752 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphate-starvation-inducible protein PsiE YP_002144590.1 4196630 D 554290 CDS YP_002144591.1 197364954 complement(4197206..4198096) 1 NC_011147.1 with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease 4198096 malG 554290004042 malG Salmonella enterica subsp. enterica serovar Paratyphi A str. maltose transporter permease YP_002144591.1 4197206 R 554290 CDS YP_002144592.1 197364955 complement(4198111..4199655) 1 NC_011147.1 with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 4199655 malF 554290004043 malF Salmonella enterica subsp. enterica serovar Paratyphi A str. maltose transporter membrane protein YP_002144592.1 4198111 R 554290 CDS YP_002144593.1 197364956 complement(4199787..4200977) 1 NC_011147.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter substrate-binding protein 4200977 malE 554290004044 malE Salmonella enterica subsp. enterica serovar Paratyphi A str. maltose ABC transporter substrate-binding protein YP_002144593.1 4199787 R 554290 CDS YP_002144594.1 197364957 4201339..4202448 1 NC_011147.1 with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein 4202448 554290004045 SSPA3756 Salmonella enterica subsp. enterica serovar Paratyphi A str. maltose/maltodextrin transporter ATP-binding protein YP_002144594.1 4201339 D 554290 CDS YP_002144595.1 197364958 4202537..4203895 1 NC_011147.1 porin involved in the transport of maltose and maltodextrins; maltoporin 4203895 lamB 554290004046 lamB Salmonella enterica subsp. enterica serovar Paratyphi A str. maltoporin YP_002144595.1 4202537 D 554290 CDS YP_002144596.1 197364959 4204059..4204976 1 NC_011147.1 similar to Salmonella typhi CT18 maltose operon periplasmic protein; maltose regulon periplasmic protein 4204976 554290004047 SSPA3758 Salmonella enterica subsp. enterica serovar Paratyphi A str. maltose regulon periplasmic protein YP_002144596.1 4204059 D 554290 CDS YP_002144597.1 197364960 4205157..4205654 1 NC_011147.1 catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 4205654 ubiC 554290004048 ubiC Salmonella enterica subsp. enterica serovar Paratyphi A str. chorismate pyruvate lyase YP_002144597.1 4205157 D 554290 CDS YP_002144598.1 197364961 4205668..4206540 1 NC_011147.1 'catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway'; 4-hydroxybenzoate octaprenyltransferase 4206540 ubiA 554290004049 ubiA Salmonella enterica subsp. enterica serovar Paratyphi A str. 4-hydroxybenzoate octaprenyltransferase YP_002144598.1 4205668 D 554290 CDS YP_002144599.1 197364962 complement(4206639..4209059) 1 NC_011147.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4209059 554290004050 SSPA3761 Salmonella enterica subsp. enterica serovar Paratyphi A str. glycerol-3-phosphate acyltransferase YP_002144599.1 4206639 R 554290 CDS YP_002144600.1 197364963 4209230..4209598 1 NC_011147.1 similar to Salmonella typhi CT18 diacylglycerol kinase; diacylglycerol kinase 4209598 554290004051 SSPA3762 Salmonella enterica subsp. enterica serovar Paratyphi A str. diacylglycerol kinase YP_002144600.1 4209230 D 554290 CDS YP_002144601.1 197364964 4209707..4210315 1 NC_011147.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 4210315 554290004052 SSPA3763 Salmonella enterica subsp. enterica serovar Paratyphi A str. LexA repressor YP_002144601.1 4209707 D 554290 CDS YP_002144602.1 197364965 4210494..4211819 1 NC_011147.1 similar to Salmonella typhi CT18 DNA-damage-inducible membrane protein; DNA-damage-inducible SOS response protein 4211819 554290004053 SSPA3764 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-damage-inducible SOS response protein YP_002144602.1 4210494 D 554290 CDS YP_002144603.1 197364966 4211819..4211929 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4211929 554290004054 SSPA3765 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144603.1 4211819 D 554290 CDS YP_002144604.1 197364967 4211948..4212160 1 NC_011147.1 unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential; stress-response protein 4212160 554290004055 SSPA3766 Salmonella enterica subsp. enterica serovar Paratyphi A str. stress-response protein YP_002144604.1 4211948 D 554290 CDS YP_002144605.1 197364968 complement(4212260..4212775) 1 NC_011147.1 'Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB'; zinc uptake transcriptional repressor 4212775 554290004056 SSPA3767 Salmonella enterica subsp. enterica serovar Paratyphi A str. zinc uptake transcriptional repressor YP_002144605.1 4212260 R 554290 CDS YP_002144606.1 197364969 4213022..4214323 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4214323 554290004057 SSPA3768 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144606.1 4213022 D 554290 CDS YP_002144607.1 197364970 4214419..4215417 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; tRNA-dihydrouridine synthase A 4215417 554290004058 SSPA3769 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA-dihydrouridine synthase A YP_002144607.1 4214419 D 554290 CDS YP_002144608.1 197364971 4215630..4215827 1 NC_011147.1 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 4215827 pspG 554290004059 pspG Salmonella enterica subsp. enterica serovar Paratyphi A str. phage shock protein G YP_002144608.1 4215630 D 554290 CDS YP_002144609.1 197364972 complement(4216002..4216985) 1 NC_011147.1 similar to Salmonella typhi CT18 quinone oxidoreductase; NADPH-dependent quinone oxidoreductase 4216985 554290004060 SSPA3771 Salmonella enterica subsp. enterica serovar Paratyphi A str. NADPH-dependent quinone oxidoreductase YP_002144609.1 4216002 R 554290 CDS YP_002144610.1 197364973 4217050..4218465 1 NC_011147.1 unwinds double stranded DNA; replicative DNA helicase 4218465 554290004061 SSPA3772 Salmonella enterica subsp. enterica serovar Paratyphi A str. replicative DNA helicase YP_002144610.1 4217050 D 554290 CDS YP_002144611.1 197364974 4218497..4219576 1 NC_011147.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4219576 alr 554290004062 alr Salmonella enterica subsp. enterica serovar Paratyphi A str. alanine racemase YP_002144611.1 4218497 D 554290 CDS YP_002144612.1 197364975 4219762..4220955 1 NC_011147.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4220955 554290004063 SSPA3774 Salmonella enterica subsp. enterica serovar Paratyphi A str. aromatic amino acid aminotransferase YP_002144612.1 4219762 D 554290 CDS YP_002144613.1 197364976 4221142..4221855 1 NC_011147.1 Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; acid phosphatase/phosphotransferase 4221855 aphA 554290004064 aphA Salmonella enterica subsp. enterica serovar Paratyphi A str. acid phosphatase/phosphotransferase YP_002144613.1 4221142 D 554290 CDS YP_002144614.1 197364977 4221984..4222400 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4222400 554290004065 SSPA3776 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144614.1 4221984 D 554290 CDS YP_002144615.1 197364978 4222403..4222759 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4222759 554290004066 SSPA3777 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144615.1 4222403 D 554290 CDS YP_002144616.1 197364979 complement(4222760..4223098) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4223098 554290004067 SSPA3778 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144616.1 4222760 R 554290 CDS YP_002144617.1 197364980 complement(4223085..4223528) 1 NC_011147.1 similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4223528 554290004068 SSPA3779 Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoprotein YP_002144617.1 4223085 R 554290 CDS YP_002144618.1 197364981 complement(4223672..4226497) 1 NC_011147.1 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate'; excinuclease ABC subunit A 4226497 uvrA 554290004069 uvrA Salmonella enterica subsp. enterica serovar Paratyphi A str. excinuclease ABC subunit A YP_002144618.1 4223672 R 554290 CDS YP_002144619.1 197364982 4226745..4227275 1 NC_011147.1 binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 4227275 554290004070 SSPA3781 Salmonella enterica subsp. enterica serovar Paratyphi A str. single-stranded DNA-binding protein YP_002144619.1 4226745 D 554290 CDS YP_002144620.1 197364983 4228464..4229096 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4229096 554290004071 SSPA3782 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144620.1 4228464 D 554290 CDS YP_002144621.1 197364984 4229093..4230481 1 NC_011147.1 similar to Salmonella typhi CT18 integral membrane protein; integral membrane protein 4230481 554290004072 SSPA3783 Salmonella enterica subsp. enterica serovar Paratyphi A str. integral membrane protein YP_002144621.1 4229093 D 554290 CDS YP_002144622.1 197364985 4230471..4231790 1 NC_011147.1 similar to Salmonella typhi CT18 type-I secretion protein; type-I secretion protein 4231790 554290004073 SSPA3784 Salmonella enterica subsp. enterica serovar Paratyphi A str. type-I secretion protein YP_002144622.1 4230471 D 554290 CDS YP_002144623.1 197364986 4231787..4233064 1 NC_011147.1 similar to Salmonella typhi CT18 type-I secretion protein; type-I secretion protein 4233064 554290004074 SSPA3785 Salmonella enterica subsp. enterica serovar Paratyphi A str. type-I secretion protein YP_002144623.1 4231787 D 554290 CDS YP_002144624.1 197364987 4233081..4246763 1 NC_011147.1 similar to Salmonella typhimurium inner membrane protein; inner membrane protein 4246763 554290004075 SSPA3786 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144624.1 4233081 D 554290 CDS YP_002144625.1 197364988 4246803..4248869 1 NC_011147.1 similar to Salmonella typhi CT18 type-1 secretion protein; type-1 secretion protein 4248869 554290004076 SSPA3787 Salmonella enterica subsp. enterica serovar Paratyphi A str. type-1 secretion protein YP_002144625.1 4246803 D 554290 CDS YP_002144626.1 197364989 complement(4249148..4249429) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4249429 554290004077 SSPA3788 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144626.1 4249148 R 554290 CDS YP_002144627.1 197364990 4250016..4251593 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4251593 554290004078 SSPA3789 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144627.1 4250016 D 554290 CDS YP_002144628.1 197364991 complement(4251581..4251904) 1 NC_011147.1 regulates genes involved in response to oxidative stress; DNA-binding transcriptional regulator SoxS 4251904 554290004079 SSPA3790 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator SoxS YP_002144628.1 4251581 R 554290 CDS YP_002144629.1 197364992 4251991..4252449 1 NC_011147.1 similar to Salmonella typhi CT18 SoxR protein; SoxR protein 4252449 554290004080 SSPA3791 Salmonella enterica subsp. enterica serovar Paratyphi A str. SoxR protein YP_002144629.1 4251991 D 554290 CDS YP_002144630.1 197364993 4252742..4253410 1 NC_011147.1 similar to Salmonella typhi CT18 glutathione S transferase; glutathione S-transferase 4253410 554290004082 SSPA3792 Salmonella enterica subsp. enterica serovar Paratyphi A str. glutathione S-transferase YP_002144630.1 4252742 D 554290 CDS YP_002144631.1 197364994 4253757..4255106 1 NC_011147.1 similar to Salmonella typhi CT18 xanthine/uracil permeases family protein; xanthine/uracil permeases family protein 4255106 554290004083 SSPA3793 Salmonella enterica subsp. enterica serovar Paratyphi A str. xanthine/uracil permeases family protein YP_002144631.1 4253757 D 554290 CDS YP_002144632.1 197364995 4255211..4256902 1 NC_011147.1 similar to Salmonella typhi CT18 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger family protein 4256902 554290004084 SSPA3794 Salmonella enterica subsp. enterica serovar Paratyphi A str. sodium/hydrogen exchanger family protein YP_002144632.1 4255211 D 554290 CDS YP_002144633.1 197364996 complement(4256997..4257884) 1 NC_011147.1 similar to Salmonella typhi CT18 lysR family regulatory protein; LysR family transcriptional regulator 4257884 554290004085 SSPA3795 Salmonella enterica subsp. enterica serovar Paratyphi A str. LysR family transcriptional regulator YP_002144633.1 4256997 R 554290 CDS YP_002144634.1 197364997 4257988..4258398 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4258398 554290004086 SSPA3796 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144634.1 4257988 D 554290 CDS YP_002144635.1 197364998 4258391..4259080 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4259080 554290004087 SSPA3797 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144635.1 4258391 D 554290 CDS YP_002144636.1 197364999 complement(4259119..4260768) 1 NC_011147.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 4260768 actP 554290004088 actP Salmonella enterica subsp. enterica serovar Paratyphi A str. acetate permease YP_002144636.1 4259119 R 554290 CDS YP_002144637.1 197365000 complement(4261321..4263279) 1 NC_011147.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 4263279 554290004090 SSPA3799 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyl-CoA synthetase YP_002144637.1 4261321 R 554290 CDS YP_002144638.1 197365001 4263466..4263612 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4263612 554290004091 SSPA3800 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144638.1 4263466 D 554290 CDS YP_002144639.1 197365002 4263711..4265147 1 NC_011147.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 4265147 nrfA 554290004092 nrfA Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c552 YP_002144639.1 4263711 D 554290 CDS YP_002144640.1 197365003 4265259..4265813 1 NC_011147.1 'part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia'; cytochrome c nitrite reductase pentaheme subunit 4265813 554290004093 SSPA3802 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c nitrite reductase pentaheme subunit YP_002144640.1 4265259 D 554290 CDS YP_002144641.1 197365004 4265810..4266481 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein; cytochrome c-type biogenesis protein 4266481 554290004094 SSPA3803 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type biogenesis protein YP_002144641.1 4265810 D 554290 CDS YP_002144642.1 197365005 4266478..4267434 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein; cytochrome c-type biogenesis protein 4267434 554290004095 SSPA3804 Salmonella enterica subsp. enterica serovar Paratyphi A str. cytochrome c-type biogenesis protein YP_002144642.1 4266478 D 554290 CDS YP_002144643.1 197365006 4267427..4269163 1 NC_011147.1 with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552; heme lyase subunit NrfE 4269163 554290004096 SSPA3805 Salmonella enterica subsp. enterica serovar Paratyphi A str. heme lyase subunit NrfE YP_002144643.1 4267427 D 554290 CDS YP_002144644.1 197365007 4269156..4269665 1 NC_011147.1 similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein; formate-dependent nitrite reductase complex subunit NrfF 4269665 554290004097 SSPA3806 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate-dependent nitrite reductase complex subunit NrfF YP_002144644.1 4269156 D 554290 CDS YP_002144645.1 197365008 4269662..4270282 1 NC_011147.1 similar to Salmonella typhi CT18 NrfG protein; formate-dependent nitrite reductase complex subunit NrfG 4270282 554290004098 SSPA3807 Salmonella enterica subsp. enterica serovar Paratyphi A str. formate-dependent nitrite reductase complex subunit NrfG YP_002144645.1 4269662 D 554290 CDS YP_002144646.1 197365009 4270627..4271937 1 NC_011147.1 'carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system'; glutamate/aspartate:proton symporter 4271937 gltP 554290004099 gltP Salmonella enterica subsp. enterica serovar Paratyphi A str. glutamate/aspartate:proton symporter YP_002144646.1 4270627 D 554290 CDS YP_002144647.2 449785005 complement(4272094..4272783) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4272783 554290004100 SSPA3809 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144647.2 4272094 R 554290 CDS YP_002144648.1 197365011 complement(4275473..4276381) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane-bound beta-hydroxylase; membrane-bound beta-hydroxylase 4276381 554290004101 SSPA3811 Salmonella enterica subsp. enterica serovar Paratyphi A str. membrane-bound beta-hydroxylase YP_002144648.1 4275473 R 554290 CDS YP_002144649.1 197365012 complement(4276639..4277094) 1 NC_011147.1 PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids; part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source; Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role; aminoalkylphosphonic acid N-acetyltransferase 4277094 554290004102 SSPA3812 Salmonella enterica subsp. enterica serovar Paratyphi A str. aminoalkylphosphonic acid N-acetyltransferase YP_002144649.1 4276639 R 554290 CDS YP_002144650.1 197365013 complement(4277224..4277667) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4277667 554290004103 SSPA3813 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144650.1 4277224 R 554290 CDS YP_002144651.1 197365014 complement(4277787..4278122) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4278122 554290004104 SSPA3814 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144651.1 4277787 R 554290 CDS YP_002144652.1 197365015 4278590..4280092 1 NC_011147.1 similar to Salmonella typhi CT18 ProP; proline/glycine betaine transporter 4280092 554290004105 SSPA3815 Salmonella enterica subsp. enterica serovar Paratyphi A str. proline/glycine betaine transporter YP_002144652.1 4278590 D 554290 CDS YP_002144653.1 197365016 complement(4280259..4281329) 1 NC_011147.1 similar to Salmonella typhi Ty2 two-component sensor kinase; sensor protein BasS/PmrB 4281329 554290004106 SSPA3816 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensor protein BasS/PmrB YP_002144653.1 4280259 R 554290 CDS YP_002144654.1 197365017 complement(4281339..4282007) 1 NC_011147.1 response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR 4282007 554290004107 SSPA3817 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator BasR YP_002144654.1 4281339 R 554290 CDS YP_002144655.1 197365018 complement(4282004..4283647) 1 NC_011147.1 with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein 4283647 554290004108 SSPA3818 Salmonella enterica subsp. enterica serovar Paratyphi A str. cell division protein YP_002144655.1 4282004 R 554290 CDS YP_002144656.1 197365019 complement(4283781..4285118) 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid permease; arginine:agmatin antiporter 4285118 554290004109 SSPA3819 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine:agmatin antiporter YP_002144656.1 4283781 R 554290 CDS YP_002144657.1 197365020 complement(4285258..4286019) 1 NC_011147.1 similar to Salmonella typhi CT18 AraC family regulatory protein; AraC family regulatory protein 4286019 554290004110 SSPA3820 Salmonella enterica subsp. enterica serovar Paratyphi A str. AraC family regulatory protein YP_002144657.1 4285258 R 554290 CDS YP_002144658.1 197365021 complement(4286317..4288584) 1 NC_011147.1 similar to Salmonella typhi CT18 arginine decarboxylase; arginine decarboxylase 4288584 554290004111 SSPA3821 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine decarboxylase YP_002144658.1 4286317 R 554290 CDS YP_002144659.1 197365022 complement(4288817..4289749) 1 NC_011147.1 similar to Salmonella typhi CT18 melibiose operon regulatory protein; DNA-binding transcriptional regulator MelR 4289749 554290004112 SSPA3822 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator MelR YP_002144659.1 4288817 R 554290 CDS YP_002144660.1 197365023 4290021..4291373 1 NC_011147.1 similar to Salmonella typhi CT18 alpha-galactosidase; alpha-galactosidase 4291373 554290004113 SSPA3823 Salmonella enterica subsp. enterica serovar Paratyphi A str. alpha-galactosidase YP_002144660.1 4290021 D 554290 CDS YP_002144661.1 197365024 4291457..4292887 1 NC_011147.1 similar to Salmonella typhi CT18 melibiose carrier protein; melibiose:sodium symporter 4292887 554290004114 SSPA3824 Salmonella enterica subsp. enterica serovar Paratyphi A str. melibiose:sodium symporter YP_002144661.1 4291457 D 554290 CDS YP_002144662.1 197365025 complement(4292985..4294631) 1 NC_011147.1 similar to Salmonella typhi CT18 fumarate hydratase class I; fumarate hydratase class I 4294631 554290004115 SSPA3825 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate hydratase class I YP_002144662.1 4292985 R 554290 CDS YP_002144663.1 197365026 complement(4294727..4296067) 1 NC_011147.1 'functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters'; anaerobic C4-dicarboxylate transporter 4296067 554290004116 SSPA3826 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic C4-dicarboxylate transporter YP_002144663.1 4294727 R 554290 CDS YP_002144664.1 197365027 complement(4296214..4296480) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4296480 554290004117 SSPA3827 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144664.1 4296214 R 554290 CDS YP_002144665.1 197365028 complement(4296797..4297516) 1 NC_011147.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR 4297516 554290004118 SSPA3828 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator DcuR YP_002144665.1 4296797 R 554290 CDS YP_002144666.1 197365029 4301926..4302552 1 NC_011147.1 similar to Escherichia coli K12 anaerobic dimethyl sulfoxide reductase subunit B; anaerobic dimethyl sulfoxide reductase subunit B 4302552 554290004121 SSPA3829 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic dimethyl sulfoxide reductase subunit B YP_002144666.1 4301926 D 554290 CDS YP_002144667.1 197365030 4302545..4303318 1 NC_011147.1 similar to Salmonella typhi CT18 dimethyl sulfoxide reductase subunit C; anaerobic dimethyl sulfoxide reductase subunit C 4303318 554290004122 SSPA3830 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic dimethyl sulfoxide reductase subunit C YP_002144667.1 4302545 D 554290 CDS YP_002144668.1 197365031 4303300..4304004 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4304004 554290004123 SSPA3831 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144668.1 4303300 D 554290 CDS YP_002144669.1 197365032 complement(4304069..4305469) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4305469 554290004124 SSPA3832 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144669.1 4304069 R 554290 CDS YP_002144670.1 197365033 4305773..4306678 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4306678 554290004125 SSPA3833 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144670.1 4305773 D 554290 CDS YP_002144671.1 197365034 complement(4306966..4307280) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4307280 554290004126 SSPA3834 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144671.1 4306966 R 554290 CDS YP_002144672.1 197365035 complement(4307337..4307534) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4307534 554290004127 SSPA3835 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144672.1 4307337 R 554290 CDS YP_002144673.1 197365036 complement(4307557..4307829) 1 NC_011147.1 similar to Salmonella typhi CT18 GerE family regulatory protein; GerE family regulatory protein 4307829 554290004128 SSPA3836 Salmonella enterica subsp. enterica serovar Paratyphi A str. GerE family regulatory protein YP_002144673.1 4307557 R 554290 CDS YP_002144674.1 197365037 complement(4307841..4308716) 1 NC_011147.1 similar to Salmonella typhi CT18 araC family regulatory protein; araC family transcriptional regulator 4308716 554290004129 SSPA3837 Salmonella enterica subsp. enterica serovar Paratyphi A str. araC family transcriptional regulator YP_002144674.1 4307841 R 554290 CDS YP_002144675.1 197365038 complement(4308982..4309200) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4309200 554290004130 SSPA3838 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144675.1 4308982 R 554290 CDS YP_002144676.1 197365039 4309521..4309814 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4309814 554290004131 SSPA3839 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144676.1 4309521 D 554290 CDS YP_002144677.1 197365040 4309811..4310302 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 4310302 554290004132 SSPA3840 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002144677.1 4309811 D 554290 CDS YP_002144678.1 197365041 complement(4310543..4311295) 1 NC_011147.1 similar to Salmonella typhi CT18 nonspecific acid phosphatase precursor; nonspecific acid phosphatase 4311295 554290004133 SSPA3841 Salmonella enterica subsp. enterica serovar Paratyphi A str. nonspecific acid phosphatase YP_002144678.1 4310543 R 554290 CDS YP_002144679.1 197365042 complement(4312196..4312771) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 4312771 554290004135 SSPA3842 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144679.1 4312196 R 554290 CDS YP_002144680.1 197365043 complement(4312808..4314511) 1 NC_011147.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 4314511 dipZ 554290004136 dipZ Salmonella enterica subsp. enterica serovar Paratyphi A str. thiol:disulfide interchange protein YP_002144680.1 4312808 R 554290 CDS YP_002144681.1 197365044 complement(4314487..4314834) 1 NC_011147.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA 4314834 554290004137 SSPA3844 Salmonella enterica subsp. enterica serovar Paratyphi A str. divalent-cation tolerance protein CutA YP_002144681.1 4314487 R 554290 CDS YP_002144682.2 449785006 complement(4314955..4316256) 1 NC_011147.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 4316256 554290004138 SSPA3845 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic C4-dicarboxylate transporter YP_002144682.2 4314955 R 554290 CDS YP_002144683.1 197365046 complement(4316371..4317807) 1 NC_011147.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 4317807 aspA 554290004139 aspA Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate ammonia-lyase YP_002144683.1 4316371 R 554290 CDS YP_002144684.1 197365047 complement(4317840..4317962) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4317962 554290004140 SSPA3847 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144684.1 4317840 R 554290 CDS YP_002144685.1 197365048 4318148..4318624 1 NC_011147.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein 4318624 fxsA 554290004141 fxsA Salmonella enterica subsp. enterica serovar Paratyphi A str. FxsA protein YP_002144685.1 4318148 D 554290 CDS YP_002144686.1 197365049 complement(4318683..4319897) 1 NC_011147.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH 4319897 554290004142 SSPA3849 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YjeH YP_002144686.1 4318683 R 554290 CDS YP_002144687.1 197365050 4320200..4320493 1 NC_011147.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4320493 groES 554290004143 groES Salmonella enterica subsp. enterica serovar Paratyphi A str. co-chaperonin GroES YP_002144687.1 4320200 D 554290 CDS YP_002144688.1 197365051 4320537..4322183 1 NC_011147.1 '60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth'; chaperonin GroEL 4322183 groEL 554290004144 groEL Salmonella enterica subsp. enterica serovar Paratyphi A str. chaperonin GroEL YP_002144688.1 4320537 D 554290 CDS YP_002144689.1 197365052 4322409..4322780 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4322780 554290004145 SSPA3852 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144689.1 4322409 D 554290 CDS YP_002144690.1 197365053 complement(4322828..4323685) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4323685 554290004146 SSPA3853 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144690.1 4322828 R 554290 CDS YP_002144691.1 197365054 complement(4323967..4324995) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4324995 554290004147 SSPA3854 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144691.1 4323967 R 554290 CDS YP_002144692.1 197365055 4325036..4325602 1 NC_011147.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 4325602 554290004148 SSPA3855 Salmonella enterica subsp. enterica serovar Paratyphi A str. elongation factor P YP_002144692.1 4325036 D 554290 CDS YP_002144693.1 197365056 4325664..4325798 1 NC_011147.1 similar to Salmonella typhi CT18 entericidin A precursor; entericidin A 4325798 554290004149 SSPA3856 Salmonella enterica subsp. enterica serovar Paratyphi A str. entericidin A YP_002144693.1 4325664 D 554290 CDS YP_002144694.1 197365057 4325906..4326052 1 NC_011147.1 similar to Salmonella typhi CT18 entericidin B precursor; entericidin B membrane lipoprotein 4326052 554290004150 SSPA3857 Salmonella enterica subsp. enterica serovar Paratyphi A str. entericidin B membrane lipoprotein YP_002144694.1 4325906 D 554290 CDS YP_002144695.1 197365058 complement(4326083..4326670) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulatory protein; transcriptional regulator 4326670 554290004151 SSPA3858 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144695.1 4326083 R 554290 CDS YP_002144696.1 197365059 4326926..4327243 1 NC_011147.1 'member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations'; quaternary ammonium compound-resistance protein SugE 4327243 554290004152 SSPA3859 Salmonella enterica subsp. enterica serovar Paratyphi A str. quaternary ammonium compound-resistance protein SugE YP_002144696.1 4326926 D 554290 CDS YP_002144697.1 197365060 complement(4327260..4327793) 1 NC_011147.1 lipocalin; globomycin-sensitive outer membrane lipoprotein; outer membrane lipoprotein Blc 4327793 554290004153 SSPA3860 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane lipoprotein Blc YP_002144697.1 4327260 R 554290 CDS YP_002144698.1 197365061 complement(4327905..4328264) 1 NC_011147.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 4328264 554290004154 SSPA3861 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate reductase subunit D YP_002144698.1 4327905 R 554290 CDS YP_002144699.1 197365062 complement(4328275..4328670) 1 NC_011147.1 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB'; fumarate reductase subunit C 4328670 554290004155 SSPA3862 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate reductase subunit C YP_002144699.1 4328275 R 554290 CDS YP_002144700.1 197365063 complement(4328681..4329415) 1 NC_011147.1 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB'; fumarate reductase iron-sulfur subunit 4329415 554290004156 SSPA3863 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate reductase iron-sulfur subunit YP_002144700.1 4328681 R 554290 CDS YP_002144701.1 197365064 complement(4329408..4331198) 1 NC_011147.1 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB'; fumarate reductase flavoprotein subunit 4331198 554290004157 SSPA3864 Salmonella enterica subsp. enterica serovar Paratyphi A str. fumarate reductase flavoprotein subunit YP_002144701.1 4329408 R 554290 CDS YP_002144702.1 197365065 4331521..4332498 1 NC_011147.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 4332498 554290004158 SSPA3865 Salmonella enterica subsp. enterica serovar Paratyphi A str. lysyl-tRNA synthetase YP_002144702.1 4331521 D 554290 CDS YP_002144703.1 197365066 4332724..4334226 1 NC_011147.1 similar to Salmonella typhi CT18 amino acid permease; amino acid permease 4334226 554290004159 SSPA3866 Salmonella enterica subsp. enterica serovar Paratyphi A str. amino acid permease YP_002144703.1 4332724 D 554290 CDS YP_002144704.1 197365067 4334234..4334611 1 NC_011147.1 similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein 4334611 554290004160 SSPA3867 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144704.1 4334234 D 554290 CDS YP_002144705.1 197365068 complement(4338093..4339061) 1 NC_011147.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 4339061 psd 554290004162 psd Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphatidylserine decarboxylase YP_002144705.1 4338093 R 554290 CDS YP_002144706.1 197365069 complement(4339153..4340229) 1 NC_011147.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 4340229 554290004163 SSPA3869 Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosome-associated GTPase YP_002144706.1 4339153 R 554290 CDS YP_002144707.1 197365070 4340312..4340857 1 NC_011147.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 4340857 554290004164 SSPA3870 Salmonella enterica subsp. enterica serovar Paratyphi A str. oligoribonuclease YP_002144707.1 4340312 D 554290 CDS YP_002144708.1 197365071 complement(4340919..4341638) 1 NC_011147.1 arginine-binding periplasmic protein 4341638 artJ 554290004165 artJ Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine-binding periplasmic protein YP_002144708.1 4340919 R 554290 CDS YP_002144709.1 197365072 complement(4342512..4343651) 1 NC_011147.1 similar to Salmonella typhi CT18 4Fe-4S binding protein; 4Fe-4S binding protein 4343651 554290004168 SSPA3872 Salmonella enterica subsp. enterica serovar Paratyphi A str. 4Fe-4S binding protein YP_002144709.1 4342512 R 554290 CDS YP_002144710.1 197365073 4343650..4345197 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4345197 554290004169 SSPA3873 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144710.1 4343650 D 554290 CDS YP_002144711.1 197365074 4345172..4345630 1 NC_011147.1 possibly involved in cell wall synthesis; ATPase 4345630 554290004170 SSPA3874 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATPase YP_002144711.1 4345172 D 554290 CDS YP_002144712.1 197365075 4345647..4346969 1 NC_011147.1 similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase II 4346969 554290004171 SSPA3875 Salmonella enterica subsp. enterica serovar Paratyphi A str. N-acetylmuramoyl-l-alanine amidase II YP_002144712.1 4345647 D 554290 CDS YP_002144713.1 197365076 4346979..4348835 1 NC_011147.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4348835 mutL 554290004172 mutL Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA mismatch repair protein YP_002144713.1 4346979 D 554290 CDS YP_002144714.1 197365077 4348873..4349778 1 NC_011147.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4349778 miaA 554290004173 miaA Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA delta(2)-isopentenylpyrophosphate transferase YP_002144714.1 4348873 D 554290 CDS YP_002144715.1 197365078 4349861..4350169 1 NC_011147.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 4350169 hfq 554290004174 hfq Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA-binding protein Hfq YP_002144715.1 4349861 D 554290 CDS YP_002144716.1 197365079 4350241..4351521 1 NC_011147.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX 4351521 554290004175 SSPA3879 Salmonella enterica subsp. enterica serovar Paratyphi A str. GTPase HflX YP_002144716.1 4350241 D 554290 CDS YP_002144717.1 197365080 4351736..4352995 1 NC_011147.1 with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 4352995 554290004176 SSPA3880 Salmonella enterica subsp. enterica serovar Paratyphi A str. FtsH protease regulator HflK YP_002144717.1 4351736 D 554290 CDS YP_002144718.1 197365081 4352998..4354002 1 NC_011147.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 4354002 554290004177 SSPA3881 Salmonella enterica subsp. enterica serovar Paratyphi A str. FtsH protease regulator HflC YP_002144718.1 4352998 D 554290 CDS YP_002144719.1 197365082 4354381..4355679 1 NC_011147.1 'catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis'; adenylosuccinate synthetase 4355679 554290004178 SSPA3882 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenylosuccinate synthetase YP_002144719.1 4354381 D 554290 CDS YP_002144720.1 197365083 4355886..4356311 1 NC_011147.1 negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 4356311 554290004179 SSPA3883 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional repressor NsrR YP_002144720.1 4355886 D 554290 CDS YP_002144721.1 197365084 4356349..4358787 1 NC_011147.1 '3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs'; exoribonuclease R 4358787 554290004180 SSPA3884 Salmonella enterica subsp. enterica serovar Paratyphi A str. exoribonuclease R YP_002144721.1 4356349 D 554290 CDS YP_002144722.1 197365085 4358878..4359609 1 NC_011147.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 4359609 554290004181 SSPA3885 Salmonella enterica subsp. enterica serovar Paratyphi A str. 23S rRNA (guanosine-2'-O-)-methyltransferase YP_002144722.1 4358878 D 554290 CDS YP_002144723.1 197365086 4359741..4360145 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4360145 554290004182 SSPA3886 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144723.1 4359741 D 554290 CDS YP_002144724.1 197365087 4360160..4360858 1 NC_011147.1 'similar to Salmonella typhimurium Phage shock protein A, IM30, suppresses sigma54-dependent transcription'; phage shock protein A 4360858 554290004183 SSPA3887 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage shock protein A YP_002144724.1 4360160 D 554290 CDS YP_002144725.1 197365088 4361082..4361765 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4361765 554290004185 SSPA3889 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144725.1 4361082 D 554290 CDS YP_002144726.1 197365089 4361783..4362181 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4362181 554290004186 SSPA3890 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144726.1 4361783 D 554290 CDS YP_002144727.1 197365090 4362191..4362829 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4362829 554290004187 SSPA3891 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144727.1 4362191 D 554290 CDS YP_002144728.1 197365091 4362832..4363995 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4363995 554290004188 SSPA3892 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144728.1 4362832 D 554290 CDS YP_002144729.1 197365092 complement(4365539..4365859) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4365859 554290004190 SSPA3895 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144729.1 4365539 R 554290 CDS YP_002144730.1 197365093 complement(4365945..4366274) 1 NC_011147.1 'in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility'; biofilm stress and motility protein A 4366274 554290004191 SSPA3896 Salmonella enterica subsp. enterica serovar Paratyphi A str. biofilm stress and motility protein A YP_002144730.1 4365945 R 554290 CDS YP_002144731.1 197365094 4366458..4367207 1 NC_011147.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 4367207 554290004192 SSPA3897 Salmonella enterica subsp. enterica serovar Paratyphi A str. esterase YP_002144731.1 4366458 D 554290 CDS YP_002144732.1 197365095 complement(4367204..4367959) 1 NC_011147.1 negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR 4367959 554290004193 SSPA3898 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional repressor UlaR YP_002144732.1 4367204 R 554290 CDS YP_002144733.1 197365096 complement(4368064..4369128) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; L-ascorbate 6-phosphate lactonase 4369128 554290004194 SSPA3899 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-ascorbate 6-phosphate lactonase YP_002144733.1 4368064 R 554290 CDS YP_002144734.1 197365097 4369458..4370888 1 NC_011147.1 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 4370888 ulaA 554290004195 ulaA Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system ascorbate-specific transporter subunit IIC YP_002144734.1 4369458 D 554290 CDS YP_002144735.1 197365098 4370904..4371209 1 NC_011147.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system L-ascorbate-specific transporter subunit IIB 4371209 554290004196 SSPA3901 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system L-ascorbate-specific transporter subunit IIB YP_002144735.1 4370904 D 554290 CDS YP_002144736.1 197365099 4371219..4371683 1 NC_011147.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system L-ascorbate-specific transporter subunit IIA 4371683 554290004197 SSPA3902 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system L-ascorbate-specific transporter subunit IIA YP_002144736.1 4371219 D 554290 CDS YP_002144737.1 197365100 4371697..4372347 1 NC_011147.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 4372347 ulaD 554290004198 ulaD Salmonella enterica subsp. enterica serovar Paratyphi A str. 3-keto-L-gulonate-6-phosphate decarboxylase YP_002144737.1 4371697 D 554290 CDS YP_002144738.1 197365101 4372357..4373211 1 NC_011147.1 UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway; L-xylulose 5-phosphate 3-epimerase 4373211 554290004199 SSPA3904 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-xylulose 5-phosphate 3-epimerase YP_002144738.1 4372357 D 554290 CDS YP_002144739.1 197365102 4373211..4373897 1 NC_011147.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 4373897 sgaE 554290004200 sgaE Salmonella enterica subsp. enterica serovar Paratyphi A str. L-ribulose-5-phosphate 4-epimerase YP_002144739.1 4373211 D 554290 CDS YP_002144740.1 197365103 complement(4374026..4374301) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4374301 554290004201 SSPA3906 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144740.1 4374026 R 554290 CDS YP_002144741.1 197365104 4374495..4374701 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4374701 554290004202 SSPA3907 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144741.1 4374495 D 554290 CDS YP_002144742.1 197365105 4374772..4375167 1 NC_011147.1 'binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21'; 30S ribosomal protein S6 4375167 rpsF 554290004203 rpsF Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S6 YP_002144742.1 4374772 D 554290 CDS YP_002144743.1 197365106 4375174..4375488 1 NC_011147.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 4375488 554290004204 SSPA3909 Salmonella enterica subsp. enterica serovar Paratyphi A str. primosomal replication protein N YP_002144743.1 4375174 D 554290 CDS YP_002144744.1 197365107 4375493..4375720 1 NC_011147.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 4375720 rpsR 554290004205 rpsR Salmonella enterica subsp. enterica serovar Paratyphi A str. 30S ribosomal protein S18 YP_002144744.1 4375493 D 554290 CDS YP_002144745.1 197365108 4375762..4376211 1 NC_011147.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 4376211 rplI 554290004206 rplI Salmonella enterica subsp. enterica serovar Paratyphi A str. 50S ribosomal protein L9 YP_002144745.1 4375762 D 554290 CDS YP_002144746.1 197365109 4376359..4377285 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4377285 554290004207 SSPA3912 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144746.1 4376359 D 554290 CDS YP_002144747.1 197365110 complement(4377335..4377970) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4377970 554290004208 SSPA3913 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144747.1 4377335 R 554290 CDS YP_002144748.1 197365111 4378148..4378810 1 NC_011147.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 4378810 554290004209 SSPA3914 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidyl-prolyl cis-trans isomerase YP_002144748.1 4378148 D 554290 CDS YP_002144749.1 197365112 4379106..4380509 1 NC_011147.1 'involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine'; D-alanine/D-serine/glycine permease 4380509 554290004210 SSPA3915 Salmonella enterica subsp. enterica serovar Paratyphi A str. D-alanine/D-serine/glycine permease YP_002144749.1 4379106 D 554290 CDS YP_002144750.1 197365113 4380847..4381986 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4381986 554290004211 SSPA3916 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144750.1 4380847 D 554290 CDS YP_002144751.1 197365114 complement(4383456..4384118) 1 NC_011147.1 Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 4384118 554290004213 SSPA3917 Salmonella enterica subsp. enterica serovar Paratyphi A str. iron-sulfur cluster repair di-iron protein YP_002144751.1 4383456 R 554290 CDS YP_002144752.1 197365115 complement(4384221..4385186) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4385186 554290004214 SSPA3918 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144752.1 4384221 R 554290 CDS YP_002144753.1 197365116 complement(4385267..4386115) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4386115 554290004215 SSPA3919 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144753.1 4385267 R 554290 CDS YP_002144754.1 197365117 4386203..4386589 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4386589 554290004216 SSPA3920 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144754.1 4386203 D 554290 CDS YP_002144755.1 197365118 complement(4386647..4388590) 1 NC_011147.1 'periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate'; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 4388590 cpdB 554290004217 cpdB Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_002144755.1 4386647 R 554290 CDS YP_002144756.1 197365119 4388857..4389597 1 NC_011147.1 'catalyzes the formation of AMP from adenosine-3',5'-bisphosphate'; adenosine-3'(2'),5'-bisphosphate nucleotidase 4389597 554290004218 SSPA3922 Salmonella enterica subsp. enterica serovar Paratyphi A str. adenosine-3'(2'),5'-bisphosphate nucleotidase YP_002144756.1 4388857 D 554290 CDS YP_002144757.1 197365120 complement(4389587..4390144) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4390144 554290004219 SSPA3923 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144757.1 4389587 R 554290 CDS YP_002144758.1 197365121 4390405..4390677 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4390677 554290004220 SSPA3924 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144758.1 4390405 D 554290 CDS YP_002144759.1 197365122 complement(4390820..4391278) 1 NC_011147.1 similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase 4391278 554290004221 SSPA3925 Salmonella enterica subsp. enterica serovar Paratyphi A str. insertion sequence element IS200 transposase YP_002144759.1 4390820 R 554290 CDS YP_002144760.1 197365123 complement(4391476..4392819) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4392819 554290004222 SSPA3926 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144760.1 4391476 R 554290 CDS YP_002144761.1 197365124 complement(4393009..4393647) 1 NC_011147.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4393647 554290004223 SSPA3927 Salmonella enterica subsp. enterica serovar Paratyphi A str. methionine sulfoxide reductase A YP_002144761.1 4393009 R 554290 CDS YP_002144762.1 197365125 4393860..4395593 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4395593 554290004224 SSPA3928 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144762.1 4393860 D 554290 CDS YP_002144763.1 197365126 4395590..4399369 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4399369 554290004225 SSPA3929 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144763.1 4395590 D 554290 CDS YP_002144764.1 197365127 4399372..4399716 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4399716 554290004226 SSPA3930 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144764.1 4399372 D 554290 CDS YP_002144765.1 197365128 complement(4399770..4400978) 1 NC_011147.1 similar to Salmonella typhi CT18 sugar transporter; sugar transporter 4400978 554290004227 SSPA3931 Salmonella enterica subsp. enterica serovar Paratyphi A str. sugar transporter YP_002144765.1 4399770 R 554290 CDS YP_002144766.1 197365129 complement(4400975..4402135) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; metallo-dependent hydrolase 4402135 554290004228 SSPA3932 Salmonella enterica subsp. enterica serovar Paratyphi A str. metallo-dependent hydrolase YP_002144766.1 4400975 R 554290 CDS YP_002144767.1 197365130 complement(4402548..4403078) 1 NC_011147.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 4403078 554290004229 SSPA3933 Salmonella enterica subsp. enterica serovar Paratyphi A str. inorganic pyrophosphatase YP_002144767.1 4402548 R 554290 CDS YP_002144768.1 197365131 complement(4403305..4404303) 1 NC_011147.1 'catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate'; fructose-1,6-bisphosphatase 4404303 554290004230 SSPA3934 Salmonella enterica subsp. enterica serovar Paratyphi A str. fructose-1,6-bisphosphatase YP_002144768.1 4403305 R 554290 CDS YP_002144769.1 197365132 complement(4406388..4406939) 1 NC_011147.1 similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein 4406939 554290004232 SSPA3935 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144769.1 4406388 R 554290 CDS YP_002144770.1 197365133 4407035..4408387 1 NC_011147.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 4408387 554290004233 SSPA3936 Salmonella enterica subsp. enterica serovar Paratyphi A str. peptidase PmbA YP_002144770.1 4407035 D 554290 CDS YP_002144771.1 197365134 4408485..4408871 1 NC_011147.1 similar to Salmonella typhi CT18 soluble cytochrome b562; soluble cytochrome b562 4408871 554290004234 SSPA3937 Salmonella enterica subsp. enterica serovar Paratyphi A str. soluble cytochrome b562 YP_002144771.1 4408485 D 554290 CDS YP_002144772.1 197365135 4409149..4409487 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4409487 554290004235 SSPA3938 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144772.1 4409149 D 554290 CDS YP_002144773.1 197365136 4409498..4409860 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4409860 554290004236 SSPA3939 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144773.1 4409498 D 554290 CDS YP_002144774.1 197365137 4409863..4410162 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4410162 554290004237 SSPA3940 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144774.1 4409863 D 554290 CDS YP_002144775.1 197365138 4410185..4410961 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4410961 554290004238 SSPA3941 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144775.1 4410185 D 554290 CDS YP_002144776.1 197365139 4410973..4411617 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4411617 554290004239 SSPA3942 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144776.1 4410973 D 554290 CDS YP_002144777.1 197365140 4411676..4412809 1 NC_011147.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 4412809 554290004240 SSPA3943 Salmonella enterica subsp. enterica serovar Paratyphi A str. dihydroorotase YP_002144777.1 4411676 D 554290 CDS YP_002144778.1 197365141 4412793..4413911 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4413911 554290004241 SSPA3944 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144778.1 4412793 D 554290 CDS YP_002144779.1 197365142 4413908..4414648 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4414648 554290004242 SSPA3945 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144779.1 4413908 D 554290 CDS YP_002144780.2 449785007 4414665..4416578 1 NC_011147.1 similar to Salmonella typhi CT18 BglB-family transcriptional antiterminator; BglB-family transcriptional antiterminator 4416578 554290004243 SSPA3946 Salmonella enterica subsp. enterica serovar Paratyphi A str. BglB-family transcriptional antiterminator YP_002144780.2 4414665 D 554290 CDS YP_002144781.1 197365144 4416656..4416898 1 NC_011147.1 Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor; bifunctional antitoxin/transcriptional repressor RelB 4416898 554290004244 SSPA3947 Salmonella enterica subsp. enterica serovar Paratyphi A str. bifunctional antitoxin/transcriptional repressor RelB YP_002144781.1 4416656 D 554290 CDS YP_002144782.1 197365145 4416888..4417172 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4417172 554290004245 SSPA3948 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144782.1 4416888 D 554290 CDS YP_002144783.1 197365146 complement(4417176..4417640) 1 NC_011147.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 4417640 nrdG 554290004246 nrdG Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic ribonucleotide reductase-activating protein YP_002144783.1 4417176 R 554290 CDS YP_002144784.1 197365147 complement(4417857..4419995) 1 NC_011147.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 4419995 554290004247 SSPA3950 Salmonella enterica subsp. enterica serovar Paratyphi A str. anaerobic ribonucleoside triphosphate reductase YP_002144784.1 4417857 R 554290 CDS YP_002144785.1 197365148 4420200..4420370 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4420370 554290004248 SSPA3951 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144785.1 4420200 D 554290 CDS YP_002144786.1 197365149 complement(4420404..4422056) 1 NC_011147.1 similar to Salmonella typhi CT18 trehalose-6-phosphate hydrolase; trehalose-6-phosphate hydrolase 4422056 554290004249 SSPA3952 Salmonella enterica subsp. enterica serovar Paratyphi A str. trehalose-6-phosphate hydrolase YP_002144786.1 4420404 R 554290 CDS YP_002144787.1 197365150 complement(4422106..4423524) 1 NC_011147.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC 4423524 554290004250 SSPA3953 Salmonella enterica subsp. enterica serovar Paratyphi A str. PTS system trehalose(maltose)-specific transporter subunit IIBC YP_002144787.1 4422106 R 554290 CDS YP_002144788.1 197365151 complement(4423662..4424609) 1 NC_011147.1 regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor 4424609 treR 554290004251 treR Salmonella enterica subsp. enterica serovar Paratyphi A str. trehalose repressor YP_002144788.1 4423662 R 554290 CDS YP_002144789.1 197365152 complement(4427817..4428263) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4428263 554290004253 SSPA3955 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144789.1 4427817 R 554290 CDS YP_002144790.1 197365153 complement(4428338..4428724) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4428724 554290004254 SSPA3956 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144790.1 4428338 R 554290 CDS YP_002144791.1 197365154 complement(4428801..4429262) 1 NC_011147.1 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit 4429262 554290004255 SSPA3957 Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate carbamoyltransferase regulatory subunit YP_002144791.1 4428801 R 554290 CDS YP_002144792.1 197365155 complement(4429275..4430210) 1 NC_011147.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 4430210 pyrB 554290004256 pyrB Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate carbamoyltransferase catalytic subunit YP_002144792.1 4429275 R 554290 CDS YP_002144793.1 197365156 complement(4430246..4430347) 1 NC_011147.1 similar to Salmonella typhi CT18 pyrBI operon leader peptide; pyrBI operon leader peptide 4430347 554290004257 SSPA3959 Salmonella enterica subsp. enterica serovar Paratyphi A str. pyrBI operon leader peptide YP_002144793.1 4430246 R 554290 CDS YP_002144794.1 197365157 complement(4430438..4430926) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 4430926 554290004258 SSPA3960 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144794.1 4430438 R 554290 CDS YP_002144795.1 197365158 complement(4431113..4432513) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4432513 554290004259 SSPA3961 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144795.1 4431113 R 554290 CDS YP_002144796.1 197365159 complement(4432569..4433573) 1 NC_011147.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase 4433573 554290004260 SSPA3962 Salmonella enterica subsp. enterica serovar Paratyphi A str. ornithine carbamoyltransferase YP_002144796.1 4432569 R 554290 CDS YP_002144797.1 197365160 complement(4433685..4434617) 1 NC_011147.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 4434617 554290004261 SSPA3963 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbamate kinase YP_002144797.1 4433685 R 554290 CDS YP_002144798.1 197365161 complement(4434628..4435848) 1 NC_011147.1 catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase 4435848 554290004262 SSPA3964 Salmonella enterica subsp. enterica serovar Paratyphi A str. arginine deiminase YP_002144798.1 4434628 R 554290 CDS YP_002144799.1 197365162 4436523..4436975 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4436975 554290004263 SSPA3965 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144799.1 4436523 D 554290 CDS YP_002144800.1 197365163 complement(4437050..4438054) 1 NC_011147.1 'catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.'; ornithine carbamoyltransferase subunit I 4438054 554290004264 SSPA3966 Salmonella enterica subsp. enterica serovar Paratyphi A str. ornithine carbamoyltransferase subunit I YP_002144800.1 4437050 R 554290 CDS YP_002144801.1 197365164 4438220..4438636 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4438636 554290004265 SSPA3967 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144801.1 4438220 D 554290 CDS YP_002144802.1 197365165 4438648..4439460 1 NC_011147.1 similar to Salmonella typhi CT18 tRNA hydroxylase; tRNA hydroxylase 4439460 554290004266 SSPA3968 Salmonella enterica subsp. enterica serovar Paratyphi A str. tRNA hydroxylase YP_002144802.1 4438648 D 554290 CDS YP_002144803.1 197365166 complement(4439470..4439616) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4439616 554290004267 SSPA3969 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144803.1 4439470 R 554290 CDS YP_002144804.1 197365167 complement(4439695..4440183) 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4440183 554290004268 SSPA3970 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144804.1 4439695 R 554290 CDS YP_002144805.1 197365168 complement(4440290..4440805) 1 NC_011147.1 similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 4440805 554290004269 SSPA3971 Salmonella enterica subsp. enterica serovar Paratyphi A str. acetyltransferase YP_002144805.1 4440290 R 554290 CDS YP_002144806.1 197365169 4440988..4442175 1 NC_011147.1 similar to Salmonella typhi CT18 innner membrane protein; innner membrane protein 4442175 554290004270 SSPA3972 Salmonella enterica subsp. enterica serovar Paratyphi A str. innner membrane protein YP_002144806.1 4440988 D 554290 CDS YP_002144807.1 197365170 complement(4442317..4445172) 1 NC_011147.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 4445172 valS 554290004271 valS Salmonella enterica subsp. enterica serovar Paratyphi A str. valyl-tRNA synthetase YP_002144807.1 4442317 R 554290 CDS YP_002144808.1 197365171 complement(4445172..4445654) 1 NC_011147.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 4445654 554290004272 SSPA3974 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit chi YP_002144808.1 4445172 R 554290 CDS YP_002144809.1 197365172 complement(4445752..4447263) 1 NC_011147.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 4447263 554290004273 SSPA3975 Salmonella enterica subsp. enterica serovar Paratyphi A str. leucyl aminopeptidase YP_002144809.1 4445752 R 554290 CDS YP_002144810.1 197365173 4447658..4448758 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 4448758 554290004274 SSPA3976 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144810.1 4447658 D 554290 CDS YP_002144811.1 197365174 4448758..4449840 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 4449840 554290004275 SSPA3977 Salmonella enterica subsp. enterica serovar Paratyphi A str. inner membrane protein YP_002144811.1 4448758 D 554290 CDS YP_002144812.1 197365175 complement(4449993..4450991) 1 NC_011147.1 similar to Salmonella typhi CT18 regulatory protein; regulatory protein 4450991 554290004276 SSPA3978 Salmonella enterica subsp. enterica serovar Paratyphi A str. regulatory protein YP_002144812.1 4449993 R 554290 CDS YP_002144813.1 197365176 complement(4451055..4452374) 1 NC_011147.1 'similar to Salmonella typhimurium GntP family,L-idonate transport protein'; GntP family, L-idonate transport protein 4452374 554290004277 SSPA3979 Salmonella enterica subsp. enterica serovar Paratyphi A str. GntP family, L-idonate transport protein YP_002144813.1 4451055 R 554290 CDS YP_002144814.1 197365177 complement(4452436..4453200) 1 NC_011147.1 'Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate'; gluconate 5-dehydrogenase 4453200 554290004278 SSPA3980 Salmonella enterica subsp. enterica serovar Paratyphi A str. gluconate 5-dehydrogenase YP_002144814.1 4452436 R 554290 CDS YP_002144815.1 197365178 complement(4453225..4454256) 1 NC_011147.1 NAD-binding; L-idonate 5-dehydrogenase 4454256 554290004279 SSPA3981 Salmonella enterica subsp. enterica serovar Paratyphi A str. L-idonate 5-dehydrogenase YP_002144815.1 4453225 R 554290 CDS YP_002144816.1 197365179 4454473..4455003 1 NC_011147.1 'similar to Salmonella typhimurium D-gluconate kinase, thermosensitive'; D-gluconate kinase 4455003 idnK 554290004280 idnK Salmonella enterica subsp. enterica serovar Paratyphi A str. D-gluconate kinase YP_002144816.1 4454473 D 554290 CDS YP_002144817.1 197365180 complement(4455031..4456050) 1 NC_011147.1 similar to Salmonella typhimurium alcohol dehydrogenase; alcohol dehydrogenase 4456050 554290004281 SSPA3983 Salmonella enterica subsp. enterica serovar Paratyphi A str. alcohol dehydrogenase YP_002144817.1 4455031 R 554290 CDS YP_002144818.1 197365181 4456521..4457780 1 NC_011147.1 similar to Salmonella typhi CT18 integrase; integrase 4457780 554290004283 SSPA3984 Salmonella enterica subsp. enterica serovar Paratyphi A str. integrase YP_002144818.1 4456521 D 554290 CDS YP_002144819.1 197365182 complement(4457834..4458829) 1 NC_011147.1 similar to |11995224|ref|NP_072082.1| PvuIIM [Proteus vulgaris]; DNA methyltransferase SptAIM 4458829 554290004284 SSPA3985 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA methyltransferase SptAIM YP_002144819.1 4457834 R 554290 CDS YP_002144820.1 197365183 4458885..4459121 1 NC_011147.1 similar to |11995223|ref|NP_072081.1| PvuIIC [Proteus vulgaris]; subunit S of type I restriction-modification system 4459121 554290004285 SSPA3986 Salmonella enterica subsp. enterica serovar Paratyphi A str. subunit S of type I restriction-modification system YP_002144820.1 4458885 D 554290 CDS YP_002144821.1 197365184 4459118..4459681 1 NC_011147.1 similar to |22135358|gb|AAM93163.1| restriction endonuclease SbaIR [Salmonella enterica]; subunit R of type I restriction-modification system 4459681 554290004286 SSPA3987 Salmonella enterica subsp. enterica serovar Paratyphi A str. subunit R of type I restriction-modification system YP_002144821.1 4459118 D 554290 CDS YP_002144822.1 197365185 complement(4459901..4460467) 1 NC_011147.1 similar to |6318609|gb|AAF06966.1| P4 psu-like protein [Escherichia coli]; hypothetical protein 4460467 554290004287 SSPA3988 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144822.1 4459901 R 554290 CDS YP_002144823.1 197365186 complement(4460484..4460729) 1 NC_011147.1 similar to |93826|pir||E42465 probable transcription activator delta - phage phi-R73; hypothetical protein 4460729 554290004288 SSPA3989 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144823.1 4460484 R 554290 CDS YP_008144955.1 516595083 complement(4460726..4461463) 1 NC_011147.1 hypothetical protein 4461463 554290004289 SSPA3989a Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_008144955.1 4460726 R 554290 CDS YP_008144956.1 516595084 4462001..4462267 1 NC_011147.1 hypothetical protein 4462267 554290004290 SSPA3989b Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_008144956.1 4462001 D 554290 CDS YP_002144824.1 197365187 4462444..4462815 1 NC_011147.1 similar to Salmonella typhi CT18 phage immunity repressor protein; phage immunity repressor protein 4462815 554290004291 SSPA3990 Salmonella enterica subsp. enterica serovar Paratyphi A str. phage immunity repressor protein YP_002144824.1 4462444 D 554290 CDS YP_002144825.1 197365188 4462812..4463039 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4463039 554290004292 SSPA3991 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144825.1 4462812 D 554290 CDS YP_002144826.1 197365189 4463036..4463356 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical P4 phage protein; hypothetical protein 4463356 554290004293 SSPA3992 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144826.1 4463036 D 554290 CDS YP_002144827.1 197365190 4463371..4465704 1 NC_011147.1 similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 4465704 554290004294 SSPA3993 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144827.1 4463371 D 554290 CDS YP_002144828.1 197365191 4465972..4466121 1 NC_011147.1 hypothetical protein 4466121 554290004295 SSPA3994 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144828.1 4465972 D 554290 CDS YP_002144829.1 197365192 4466257..4466415 1 NC_011147.1 similar to |14252927|emb|CAC39282.1| integrase [Escherichia coli]; hypothetical protein 4466415 554290004296 SSPA3995 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144829.1 4466257 D 554290 CDS YP_002144830.1 197365193 4467934..4468431 1 NC_011147.1 similar to |153860|gb|AAA71892.1| fimbrial structural protein; fimbrial structural protein 4468431 554290004299 SSPA3996 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial structural protein YP_002144830.1 4467934 D 554290 CDS YP_002144831.1 197365194 4468553..4469305 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 4469305 554290004300 SSPA3997 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002144831.1 4468553 D 554290 CDS YP_002144832.1 197365195 4469310..4471754 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 4471754 554290004301 SSPA3998 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane fimbrial usher protein YP_002144832.1 4469310 D 554290 CDS YP_002144834.1 197365197 4473816..4474166 1 NC_011147.1 similar to Salmonella typhi Ty2 GerE-family regulatory protein; GerE-family regulatory protein 4474166 554290004305 SSPA4000 Salmonella enterica subsp. enterica serovar Paratyphi A str. GerE-family regulatory protein YP_002144834.1 4473816 D 554290 CDS YP_002144835.1 197365198 4474398..4475063 1 NC_011147.1 similar to |19071798|gb|AAL80007.1| thiol:disulfide oxidoreductase Dle [Salmonella enteritidis]; hypothetical protein 4475063 554290004306 SSPA4001 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144835.1 4474398 D 554290 CDS YP_002144836.1 197365199 4475250..4476089 1 NC_011147.1 similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 4476089 554290004307 SSPA4002 Salmonella enterica subsp. enterica serovar Paratyphi A str. outer membrane protein YP_002144836.1 4475250 D 554290 CDS YP_002144837.1 197365200 4476352..4476618 1 NC_011147.1 similar to |16082776|ref|NP_395222.1| transposase [Yersinia pestis CO92]; hypothetical protein 4476618 554290004308 SSPA4003 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144837.1 4476352 D 554290 CDS YP_002144838.1 197365201 4476699..4477376 1 NC_011147.1 similar to |38639745|ref|NP_943514.1| transposase [Klebsiella pneumoniae]; hypothetical protein 4477376 554290004309 SSPA4004 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144838.1 4476699 D 554290 CDS YP_002144839.1 197365202 complement(4477563..4483883) 1 NC_011147.1 'similar to Escherichia coli K12 orf, hypothetical protein'; hypothetical protein 4483883 554290004310 SSPA4005 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144839.1 4477563 R 554290 CDS YP_002144840.1 197365203 complement(4483896..4487195) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4487195 554290004311 SSPA4006 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144840.1 4483896 R 554290 CDS YP_002144841.1 197365204 4487459..4487698 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4487698 554290004312 SSPA4007 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144841.1 4487459 D 554290 CDS YP_002144842.1 197365205 4487776..4488651 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4488651 554290004313 SSPA4008 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144842.1 4487776 D 554290 CDS YP_002144843.1 197365206 complement(4489020..4490228) 1 NC_011147.1 IS10 transposase 4490228 554290004315 SSPA4009 Salmonella enterica subsp. enterica serovar Paratyphi A str. IS10 transposase YP_002144843.1 4489020 R 554290 CDS YP_002144844.1 197365207 complement(4490469..4491194) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4491194 554290004316 SSPA4010 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144844.1 4490469 R 554290 CDS YP_002144845.1 197365208 complement(4491596..4493221) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4493221 554290004317 SSPA4011 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144845.1 4491596 R 554290 CDS YP_002144846.1 197365209 complement(4493232..4493489) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4493489 554290004318 SSPA4012 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144846.1 4493232 R 554290 CDS YP_002144847.1 197365210 4493978..4494586 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4494586 554290004319 SSPA4013 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144847.1 4493978 D 554290 CDS YP_002144848.1 197365211 4494962..4495873 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4495873 554290004320 SSPA4014 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144848.1 4494962 D 554290 CDS YP_002144849.1 197365212 4496078..4496539 1 NC_011147.1 similar to Salmonella typhi CT18 exported protein; hypothetical protein 4496539 554290004321 SSPA4015 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144849.1 4496078 D 554290 CDS YP_002144850.1 197365213 complement(4496556..4497221) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4497221 554290004322 SSPA4016 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144850.1 4496556 R 554290 CDS YP_002144851.1 197365214 4497571..4498344 1 NC_011147.1 regulates the expression of uxuBA; DNA-binding transcriptional repressor UxuR 4498344 554290004323 SSPA4017 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional repressor UxuR YP_002144851.1 4497571 D 554290 CDS YP_002144852.1 197365215 complement(4498345..4499358) 1 NC_011147.1 'catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; tryptophanyl-tRNA synthetase II 4499358 554290004324 SSPA4018 Salmonella enterica subsp. enterica serovar Paratyphi A str. tryptophanyl-tRNA synthetase II YP_002144852.1 4498345 R 554290 CDS YP_002144853.1 197365216 4499655..4499807 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4499807 554290004325 SSPA4019 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144853.1 4499655 D 554290 CDS YP_002144854.1 197365217 4500076..4500606 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4500606 554290004326 SSPA4020 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144854.1 4500076 D 554290 CDS YP_002144855.1 197365218 4500845..4501579 1 NC_011147.1 similar to Salmonella typhi CT18 probable aspartate racemase; aspartate racemase 4501579 554290004327 SSPA4021 Salmonella enterica subsp. enterica serovar Paratyphi A str. aspartate racemase YP_002144855.1 4500845 D 554290 CDS YP_002144856.1 197365219 complement(4501585..4502493) 1 NC_011147.1 similar to Salmonella typhi CT18 probable transcriptional activator; DNA-binding transcriptional regulator 4502493 554290004328 SSPA4022 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional regulator YP_002144856.1 4501585 R 554290 CDS YP_002144857.1 197365220 complement(4502612..4503784) 1 NC_011147.1 similar to Salmonella typhi CT18 probable isoaspartyl dipeptidase; isoaspartyl dipeptidase 4503784 554290004329 SSPA4023 Salmonella enterica subsp. enterica serovar Paratyphi A str. isoaspartyl dipeptidase YP_002144857.1 4502612 R 554290 CDS YP_002144858.1 197365221 complement(4503797..4504258) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4504258 554290004330 SSPA4024 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144858.1 4503797 R 554290 CDS YP_002144859.1 197365222 complement(4504255..4505139) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4505139 554290004331 SSPA4025 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144859.1 4504255 R 554290 CDS YP_002144860.1 197365223 complement(4505283..4505657) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4505657 554290004332 SSPA4026 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144860.1 4505283 R 554290 CDS YP_002144861.1 197365224 complement(4505797..4506981) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4506981 554290004333 SSPA4027 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144861.1 4505797 R 554290 CDS YP_002144862.1 197365225 complement(4507201..4508517) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4508517 554290004334 SSPA4028 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144862.1 4507201 R 554290 CDS YP_002144863.1 197365226 4510279..4511244 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4511244 554290004336 SSPA4029 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144863.1 4510279 D 554290 CDS YP_002144864.1 197365227 4511425..4512795 1 NC_011147.1 similar to |23037247|ref|ZP_00069459.1| COG1012: NAD-dependent aldehyde dehydrogenases [Oenococcus oeni MCW]; hypothetical protein 4512795 554290004337 SSPA4030 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144864.1 4511425 D 554290 CDS YP_002144865.1 197365228 complement(4512890..4513033) 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4513033 554290004338 SSPA4031 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144865.1 4512890 R 554290 CDS YP_002144866.1 197365229 complement(4513239..4513940) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4513940 554290004339 SSPA4032 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144866.1 4513239 R 554290 CDS YP_002144867.1 197365230 complement(4514014..4514409) 1 NC_011147.1 involved in the degradation of RNA; may be involved in the recycling of RNA during the SOS response; endoribonuclease SymE 4514409 554290004340 SSPA4033 Salmonella enterica subsp. enterica serovar Paratyphi A str. endoribonuclease SymE YP_002144867.1 4514014 R 554290 CDS YP_002144868.1 197365231 complement(4514574..4515962) 1 NC_011147.1 specificity determinant for hsdM and hsdR; EcoKI restriction-modification system protein HsdS 4515962 554290004341 SSPA4034 Salmonella enterica subsp. enterica serovar Paratyphi A str. EcoKI restriction-modification system protein HsdS YP_002144868.1 4514574 R 554290 CDS YP_002144869.1 197365232 complement(4515959..4517545) 1 NC_011147.1 'similar to Salmonella typhimurium DNA methylase M,host modification'; DNA methylase M 4517545 554290004342 SSPA4035 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA methylase M YP_002144869.1 4515959 R 554290 CDS YP_002144870.1 197365233 complement(4517703..4521212) 1 NC_011147.1 restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R 4521212 hsdR 554290004343 hsdR Salmonella enterica subsp. enterica serovar Paratyphi A str. type I restriction enzyme EcoKI subunit R YP_002144870.1 4517703 R 554290 CDS YP_002144871.1 197365234 4521410..4522324 1 NC_011147.1 similar to Salmonella typhi CT18 mrr restriction system protein; mrr restriction system protein 4522324 554290004344 SSPA4037 Salmonella enterica subsp. enterica serovar Paratyphi A str. mrr restriction system protein YP_002144871.1 4521410 D 554290 CDS YP_002144872.1 197365235 4522577..4522864 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4522864 554290004345 SSPA4038 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144872.1 4522577 D 554290 CDS YP_002144873.1 197365236 4522851..4523153 1 NC_011147.1 similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4523153 554290004346 SSPA4039 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144873.1 4522851 D 554290 CDS YP_002144874.1 197365237 complement(4523228..4524184) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; GTP-binding protein YjiA 4524184 554290004347 SSPA4040 Salmonella enterica subsp. enterica serovar Paratyphi A str. GTP-binding protein YjiA YP_002144874.1 4523228 R 554290 CDS YP_002144875.1 197365238 complement(4524195..4524398) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4524398 554290004348 SSPA4041 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144875.1 4524195 R 554290 CDS YP_002144876.1 197365239 complement(4524493..4526643) 1 NC_011147.1 similar to Salmonella typhi Ty2 probable carbon starvation protein; carbon starvation protein A 4526643 554290004349 SSPA4042 Salmonella enterica subsp. enterica serovar Paratyphi A str. carbon starvation protein A YP_002144876.1 4524493 R 554290 CDS YP_002144877.1 197365240 4527010..4528671 1 NC_011147.1 'similar to Salmonella typhimurium methyl-accepting chemotaxis protein I, serine sensor receptor'; methyl-accepting chemotaxis protein I, serine sensor receptor 4528671 554290004350 SSPA4043 Salmonella enterica subsp. enterica serovar Paratyphi A str. methyl-accepting chemotaxis protein I, serine sensor receptor YP_002144877.1 4527010 D 554290 CDS YP_002144878.2 449785008 complement(4528836..4531127) 1 NC_011147.1 catalyzes the transfer of phosphoglycerol to the glucan backbone; phosphoglycerol transferase I 4531127 554290004351 SSPA4044 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycerol transferase I YP_002144878.2 4528836 R 554290 CDS YP_002144879.1 197365242 complement(4531410..4531871) 1 NC_011147.1 similar to Salmonella typhi CT18 secreted protein; hypothetical protein 4531871 554290004352 SSPA4045 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144879.1 4531410 R 554290 CDS YP_002144880.1 197365243 complement(4531929..4532666) 1 NC_011147.1 acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC 4532666 554290004353 SSPA4046 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA replication protein DnaC YP_002144880.1 4531929 R 554290 CDS YP_002144881.1 197365244 complement(4532669..4533208) 1 NC_011147.1 'This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N''; primosomal protein DnaI 4533208 554290004354 SSPA4047 Salmonella enterica subsp. enterica serovar Paratyphi A str. primosomal protein DnaI YP_002144881.1 4532669 R 554290 CDS YP_002144882.1 197365245 complement(4533301..4533774) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4533774 554290004355 SSPA4048 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144882.1 4533301 R 554290 CDS YP_002144883.1 197365246 complement(4533765..4534676) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4534676 554290004356 SSPA4049 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144883.1 4533765 R 554290 CDS YP_002144884.1 197365247 4535254..4535979 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical regulatory protein; hypothetical protein 4535979 554290004357 SSPA4050 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144884.1 4535254 D 554290 CDS YP_002144885.1 197365248 4535991..4536614 1 NC_011147.1 regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin; DNA-binding transcriptional activator BglJ 4536614 554290004358 SSPA4051 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding transcriptional activator BglJ YP_002144885.1 4535991 D 554290 CDS YP_002144886.1 197365249 complement(4536665..4537123) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4537123 554290004359 SSPA4052 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144886.1 4536665 R 554290 CDS YP_002144887.1 197365250 complement(4537274..4538062) 1 NC_011147.1 similar to Salmonella typhi CT18 ferric iron reductase protein; ferric hydroximate transport ferric iron reductase 4538062 554290004360 SSPA4053 Salmonella enterica subsp. enterica serovar Paratyphi A str. ferric hydroximate transport ferric iron reductase YP_002144887.1 4537274 R 554290 CDS YP_002144888.1 197365251 complement(4538183..4539247) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4539247 554290004361 SSPA4054 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144888.1 4538183 R 554290 CDS YP_002144889.1 197365252 4539498..4539734 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4539734 554290004362 SSPA4055 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144889.1 4539498 D 554290 CDS YP_002144890.1 197365253 complement(4540275..4541303) 1 NC_011147.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 4541303 rsmC 554290004366 rsmC Salmonella enterica subsp. enterica serovar Paratyphi A str. 16S ribosomal RNA m2G1207 methyltransferase YP_002144890.1 4540275 R 554290 CDS YP_002144891.1 197365254 4541406..4541843 1 NC_011147.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 4541843 554290004367 SSPA4057 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA polymerase III subunit psi YP_002144891.1 4541406 D 554290 CDS YP_002144892.1 197365255 4541788..4542234 1 NC_011147.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 4542234 rimI 554290004368 rimI Salmonella enterica subsp. enterica serovar Paratyphi A str. ribosomal-protein-alanine N-acetyltransferase YP_002144892.1 4541788 D 554290 CDS YP_002144893.1 197365256 4542253..4542933 1 NC_011147.1 'manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily'; nucleotidase 4542933 554290004369 SSPA4059 Salmonella enterica subsp. enterica serovar Paratyphi A str. nucleotidase YP_002144893.1 4542253 D 554290 CDS YP_002144894.1 197365257 4543025..4544614 1 NC_011147.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 4544614 prfC 554290004370 prfC Salmonella enterica subsp. enterica serovar Paratyphi A str. peptide chain release factor 3 YP_002144894.1 4543025 D 554290 CDS YP_002144895.1 197365258 4545016..4545633 1 NC_011147.1 similar to Salmonella typhi CT18 periplasmic protein; hypothetical protein 4545633 554290004371 SSPA4061 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144895.1 4545016 D 554290 CDS YP_002144896.1 197365259 4546047..4547120 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4547120 554290004372 SSPA4062 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144896.1 4546047 D 554290 CDS YP_002144897.1 197365260 4547117..4547890 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; deoxyribonuclease YjjV 4547890 554290004373 SSPA4063 Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxyribonuclease YjjV YP_002144897.1 4547117 D 554290 CDS YP_002144898.1 197365261 complement(4547923..4548786) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4548786 554290004374 SSPA4064 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144898.1 4547923 R 554290 CDS YP_002144899.1 197365262 complement(4548758..4550308) 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4550308 554290004375 SSPA4065 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144899.1 4548758 R 554290 CDS YP_002144900.1 197365263 4550550..4551347 1 NC_011147.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 4551347 554290004376 SSPA4066 Salmonella enterica subsp. enterica serovar Paratyphi A str. deoxyribose-phosphate aldolase YP_002144900.1 4550550 D 554290 CDS YP_002144901.1 197365264 4551474..4552796 1 NC_011147.1 'Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate'; thymidine phosphorylase 4552796 deoA 554290004377 deoA Salmonella enterica subsp. enterica serovar Paratyphi A str. thymidine phosphorylase YP_002144901.1 4551474 D 554290 CDS YP_002144902.1 197365265 4552848..4554071 1 NC_011147.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 4554071 554290004378 SSPA4068 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphopentomutase YP_002144902.1 4552848 D 554290 CDS YP_002144903.1 197365266 4554281..4555000 1 NC_011147.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 4555000 deoD 554290004379 deoD Salmonella enterica subsp. enterica serovar Paratyphi A str. purine nucleoside phosphorylase YP_002144903.1 4554281 D 554290 CDS YP_002144904.1 197365267 4555207..4555698 1 NC_011147.1 similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein 4555698 554290004380 SSPA4070 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144904.1 4555207 D 554290 CDS YP_002144905.1 197365268 complement(4555783..4556799) 1 NC_011147.1 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A 4556799 lplA 554290004381 lplA Salmonella enterica subsp. enterica serovar Paratyphi A str. lipoate-protein ligase A YP_002144905.1 4555783 R 554290 CDS YP_002144906.1 197365269 complement(4556833..4557477) 1 NC_011147.1 similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4557477 554290004382 SSPA4072 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144906.1 4556833 R 554290 CDS YP_002144907.1 197365270 4557594..4558562 1 NC_011147.1 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 4558562 serB 554290004383 serB Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoserine phosphatase YP_002144907.1 4557594 D 554290 CDS YP_002144908.1 197365271 4558646..4560028 1 NC_011147.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 4560028 554290004384 SSPA4074 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA repair protein RadA YP_002144908.1 4558646 D 554290 CDS YP_002144909.1 197365272 4560152..4561411 1 NC_011147.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 4561411 554290004385 SSPA4075 Salmonella enterica subsp. enterica serovar Paratyphi A str. nicotinamide-nucleotide adenylyltransferase YP_002144909.1 4560152 D 554290 CDS YP_002144910.1 197365273 complement(4561529..4563196) 1 NC_011147.1 'ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence'; ABC transporter ATP-binding protein 4563196 554290004386 SSPA4076 Salmonella enterica subsp. enterica serovar Paratyphi A str. ABC transporter ATP-binding protein YP_002144910.1 4561529 R 554290 CDS YP_002144911.1 197365274 4563459..4565342 1 NC_011147.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 4565342 554290004387 SSPA4077 Salmonella enterica subsp. enterica serovar Paratyphi A str. lytic murein transglycosylase YP_002144911.1 4563459 D 554290 CDS YP_002144912.1 197365275 4565400..4565726 1 NC_011147.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 4565726 554290004388 SSPA4078 Salmonella enterica subsp. enterica serovar Paratyphi A str. Trp operon repressor YP_002144912.1 4565400 D 554290 CDS YP_002144913.1 197365276 complement(4565828..4566343) 1 NC_011147.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 4566343 554290004389 SSPA4079 Salmonella enterica subsp. enterica serovar Paratyphi A str. NTPase YP_002144913.1 4565828 R 554290 CDS YP_002144914.1 197365277 4566392..4567039 1 NC_011147.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 4567039 554290004390 SSPA4080 Salmonella enterica subsp. enterica serovar Paratyphi A str. phosphoglycerate mutase YP_002144914.1 4566392 D 554290 CDS YP_002144915.1 197365278 complement(4567036..4567905) 1 NC_011147.1 similar to Salmonella typhi CT18 right origin-binding protein; right origin-binding protein 4567905 554290004391 SSPA4081 Salmonella enterica subsp. enterica serovar Paratyphi A str. right origin-binding protein YP_002144915.1 4567036 R 554290 CDS YP_002144916.1 197365279 4568117..4568590 1 NC_011147.1 similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4568590 554290004392 SSPA4082 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144916.1 4568117 D 554290 CDS YP_002144917.1 197365280 4568603..4569292 1 NC_011147.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB 4569292 554290004393 SSPA4083 Salmonella enterica subsp. enterica serovar Paratyphi A str. DNA-binding response regulator CreB YP_002144917.1 4568603 D 554290 CDS YP_002144918.2 449785009 4569292..4570716 1 NC_011147.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC 4570716 554290004394 SSPA4084 Salmonella enterica subsp. enterica serovar Paratyphi A str. sensory histidine kinase CreC YP_002144918.2 4569292 D 554290 CDS YP_002144919.1 197365282 4570774..4572123 1 NC_011147.1 similar to Salmonella typhi CT18 inner membrane protein CreD; hypothetical protein 4572123 554290004395 SSPA4085 Salmonella enterica subsp. enterica serovar Paratyphi A str. hypothetical protein YP_002144919.1 4570774 D 554290 CDS YP_002144920.1 197365283 complement(4572181..4573266) 1 NC_011147.1 similar to Salmonella typhimurium major fimbrial subunit; major fimbrial subunit 4573266 554290004396 SSPA4086 Salmonella enterica subsp. enterica serovar Paratyphi A str. major fimbrial subunit YP_002144920.1 4572181 R 554290 CDS YP_002144921.1 197365284 complement(4573307..4573864) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 4573864 554290004397 SSPA4087 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial subunit YP_002144921.1 4573307 R 554290 CDS YP_002144922.1 197365285 complement(4573882..4576419) 1 NC_011147.1 similar to Salmonella typhimurium fimbrial usher protein; fimbrial usher protein 4576419 554290004398 SSPA4088 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial usher protein YP_002144922.1 4573882 R 554290 CDS YP_002144923.1 197365286 complement(4576465..4577148) 1 NC_011147.1 similar to Salmonella typhi Ty2 fimbrial chaperone protein; fimbrial chaperone protein 4577148 554290004399 SSPA4089 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial chaperone protein YP_002144923.1 4576465 R 554290 CDS YP_002144924.1 197365287 complement(4577219..4577764) 1 NC_011147.1 similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 4577764 554290004400 SSPA4090 Salmonella enterica subsp. enterica serovar Paratyphi A str. fimbrial protein YP_002144924.1 4577219 R 554290 CDS YP_002144925.1 197365288 complement(4578098..4578769) 1 NC_011147.1 similar to Salmonella typhi CT18 transcriptional regulator protein; transcriptional regulator 4578769 554290004401 SSPA4091 Salmonella enterica subsp. enterica serovar Paratyphi A str. transcriptional regulator YP_002144925.1 4578098 R 554290 CDS YP_002144926.1 197365289 complement(4579735..4580451) 1 NC_011147.1 similar to Salmonella typhi CT18 global response regulator; two-component response regulator 4580451 554290004403 SSPA4092 Salmonella enterica subsp. enterica serovar Paratyphi A str. two-component response regulator YP_002144926.1 4579735 R 554290 CDS YP_002144927.1 197365290 4581087..4581773 1 NC_011147.1 member of the SPOUT superfamily of methyltransferases; RNA methyltransferase 4581773 554290004404 SSPA4093 Salmonella enterica subsp. enterica serovar Paratyphi A str. RNA methyltransferase YP_002144927.1 4581087 D 554290 CDS