-- dump date 20140620_054115 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 554290000001 SEQ_END SEQ_END NC_011147.1 4581797 4581797 DR NC_011147.1; contig end 4581797..4581797 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140848.1 CDS thrL NC_011147.1 229 294 D thr operon leader peptide 229..294 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140849.1 CDS thrA NC_011147.1 376 2838 D multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 376..2838 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140850.1 CDS SSPA0003 NC_011147.1 2840 3769 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 2840..3769 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140851.1 CDS SSPA0004 NC_011147.1 3773 5059 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 3773..5059 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140852.1 CDS SSPA0005 NC_011147.1 5153 5926 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(5153..5926) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140853.1 CDS SSPA0005a NC_011147.1 6005 7435 R pseudogene in Paratyphi A strain ATCC9150 (SPA0006) due to single base deletion; amino-acid transport protein complement(6005..7435) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140854.1 CDS SSPA0006 NC_011147.1 7704 8657 D similar to Salmonella typhi CT18 transaldolase B; transaldolase B 7704..8657 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140855.1 CDS mogA NC_011147.1 8768 9358 D forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 8768..9358 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140856.1 CDS SSPA0008 NC_011147.1 9415 9981 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(9415..9981) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140857.1 CDS SSPA0009 NC_011147.1 10131 10844 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(10131..10844) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140858.1 CDS SSPA0010 NC_011147.1 10880 11284 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(10880..11284) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140859.1 CDS dnaK NC_011147.1 11634 13550 D heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 11634..13550 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140860.1 CDS SSPA0012 NC_011147.1 13636 14763 D 'chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion'; chaperone protein DnaJ 13636..14763 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140861.1 CDS SSPA0013 NC_011147.1 15047 15994 D similar to Salmonella typhi CT18 regulatory protein; regulatory protein 15047..15994 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140862.1 CDS SSPA0014 NC_011147.1 16121 16465 D similar to Salmonella typhi CT18 phage protein; hypothetical protein 16121..16465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140863.1 CDS SSPA0015 NC_011147.1 16526 17059 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(16526..17059) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140864.1 CDS SSPA0016 NC_011147.1 17076 17519 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(17076..17519) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140865.2 CDS SSPA0017 NC_011147.1 20091 23087 D similar to Salmonella typhimurium hydroxymethyltransferase; hydroxymethyltransferase 20091..23087 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140866.1 CDS SSPA0018 NC_011147.1 23368 24072 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 23368..24072 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140867.1 CDS SSPA0019 NC_011147.1 24502 25044 D similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 24502..25044 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140868.1 CDS SSPA0020 NC_011147.1 25145 25831 D similar to Salmonella typhi CT18 fimbrial chaperone; fimbrial chaperone 25145..25831 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140869.1 CDS SSPA0021 NC_011147.1 25836 28457 D similar to Salmonella typhimurium fimbrial usher; fimbrial usher 25836..28457 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140870.1 CDS SSPA0022 NC_011147.1 28458 29465 D similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 28458..29465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140871.1 CDS SSPA0023 NC_011147.1 29466 30011 D similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit 29466..30011 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140872.1 CDS SSPA0024 NC_011147.1 30538 31242 D similar to Salmonella typhi CT18 fimbrial chaperone; fimbrial chaperone 30538..31242 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140873.1 CDS SSPA0025 NC_011147.1 31307 32152 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 31307..32152 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140874.1 CDS SSPA0026 NC_011147.1 32191 32478 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 32191..32478 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140875.1 CDS SSPA0027 NC_011147.1 32578 33027 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(32578..33027) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140876.1 CDS SSPA0028 NC_011147.1 33397 34392 D similar to Salmonella typhi CT18 transcriptional regulator (lysR family); transcriptional regulator 33397..34392 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140877.1 CDS SSPA0029 NC_011147.1 34409 34846 R similar to Salmonella typhimurium transcription regulator; transcriptional regulator complement(34409..34846) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140878.1 CDS SSPA0030 NC_011147.1 35369 37087 D similar to Salmonella typhi CT18 possible sulfatase; sulfatase 35369..37087 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140879.1 CDS SSPA0031 NC_011147.1 37133 38704 R similar to Salmonella typhi CT18 secreted 5'-nucleotidase; secreted 5'-nucleotidase complement(37133..38704) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140880.1 CDS SSPA0032 NC_011147.1 38803 39564 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(38803..39564) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140881.1 CDS SSPA0033 NC_011147.1 41732 42919 D similar to Salmonella typhi CT18 possible sulfatase regulatory protein; sulfatase regulatory protein 41732..42919 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140882.1 CDS SSPA0034 NC_011147.1 42944 44191 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 42944..44191 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140883.1 CDS SSPA0035 NC_011147.1 44318 46033 D similar to Salmonella typhi CT18 possible sulfatase; sulfatase 44318..46033 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140884.1 CDS nhaA NC_011147.1 46196 47362 D exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 46196..47362 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140885.1 CDS nhaR NC_011147.1 47424 48323 D Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 47424..48323 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140886.1 CDS SSPA0038 NC_011147.1 48402 50432 R similar to Salmonella typhi CT18 glycosyl hydrolase; glycosyl hydrolase complement(48402..50432) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140887.1 CDS SSPA0039 NC_011147.1 50457 51830 R similar to Salmonella typhi CT18 transport protein; transporter complement(50457..51830) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140888.1 CDS rpsT NC_011147.1 52286 52549 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(52286..52549) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140889.1 CDS SSPA0041 NC_011147.1 52655 52870 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 52655..52870 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140890.1 CDS SSPA0042 NC_011147.1 52878 53816 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 52878..53816 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140891.1 CDS ileS NC_011147.1 53861 56695 D 'IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme'; isoleucyl-tRNA synthetase 53861..56695 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140892.1 CDS lspA NC_011147.1 56695 57195 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 56695..57195 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140893.1 CDS SSPA0045 NC_011147.1 57350 57799 D similar to Salmonella typhi Ty2 probable FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase; FkbB-type 16 kD peptidyl-prolyl cis-trans isomerase 57350..57799 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140894.1 CDS ispH NC_011147.1 57802 58752 D catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 57802..58752 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140895.1 CDS SSPA0047 NC_011147.1 58952 60154 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 58952..60154 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140896.1 CDS SSPA0048 NC_011147.1 60170 61084 D catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; ribonucleoside hydrolase RihC 60170..61084 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140897.1 CDS SSPA0049 NC_011147.1 61106 61792 R similar to Salmonella typhi CT18 transcriptional regulatory protein citb; transcriptional regulatory protein citb complement(61106..61792) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140898.1 CDS SSPA0050 NC_011147.1 61794 63413 R similar to Salmonella typhi CT18 sensor kinase cita; transcriptional regulator complement(61794..63413) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140899.1 CDS SSPA0051 NC_011147.1 63548 64831 R similar to Salmonella typhi CT18 oxaloacetate decarboxylase beta chain; oxaloacetate decarboxylase subunit beta complement(63548..64831) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140900.1 CDS oadA NC_011147.1 64844 66610 R catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase complement(64844..66610) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140901.1 CDS SSPA0054 NC_011147.1 66626 66865 R catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide; oxaloacetate decarboxylase subunit gamma complement(66626..66865) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140902.1 CDS SSPA0055 NC_011147.1 67024 68364 R similar to Salmonella typhi CT18 citrate-sodium symporter; citrate-sodium symporter complement(67024..68364) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140903.1 CDS SSPA0056 NC_011147.1 68609 69652 D similar to Salmonella typhi Ty2 [citrate (PRO-3S)-lyase] ligase; [citrate (pro-3S)-lyase] ligase 68609..69652 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140904.1 CDS SSPA0057 NC_011147.1 69682 69975 D acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 69682..69975 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140905.1 CDS SSPA0058 NC_011147.1 69972 70841 D similar to Salmonella typhi Ty2 citrate lyase beta chain; citrate lyase subunit beta 69972..70841 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140906.1 CDS SSPA0059 NC_011147.1 70852 72372 D similar to Salmonella typhi Ty2 citrate lyase alpha chain; citrate lyase subunit alpha 70852..72372 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140907.1 CDS SSPA0060 NC_011147.1 72372 72923 D similar to Salmonella typhi Ty2 citx protein; hypothetical protein 72372..72923 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140908.1 CDS SSPA0061 NC_011147.1 72901 73809 D similar to Salmonella typhi Ty2 CitG protein; CitG protein 72901..73809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140909.1 CDS SSPA0062 NC_011147.1 73989 74810 D 'catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis'; dihydrodipicolinate reductase 73989..74810 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140910.1 CDS SSPA0063 NC_011147.1 75671 76819 D catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 75671..76819 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140911.1 CDS carB NC_011147.1 76838 80065 D four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 76838..80065 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140912.1 CDS SSPA0065 NC_011147.1 80339 80734 D regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons; DNA-binding transcriptional activator CaiF 80339..80734 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140913.1 CDS SSPA0066 NC_011147.1 80812 81408 R involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; carnitine operon protein CaiE complement(80812..81408) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140914.1 CDS SSPA0067 NC_011147.1 81519 82304 R catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase complement(81519..82304) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140915.1 CDS caiC NC_011147.1 82358 83911 R similar to Salmonella typhi CT18 probable crotonobetaine/carnitine-CoA ligase; crotonobetaine/carnitine-CoA ligase complement(82358..83911) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140916.1 CDS SSPA0069 NC_011147.1 83974 85191 R 'catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine'; crotonobetainyl-CoA:carnitine CoA-transferase complement(83974..85191) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140917.1 CDS SSPA0070 NC_011147.1 85303 86445 R catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; crotonobetainyl-CoA dehydrogenase complement(85303..86445) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140918.1 CDS SSPA0071 NC_011147.1 86480 87997 R catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; L-carnitine/gamma-butyrobetaine antiporter complement(86480..87997) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140919.1 CDS SSPA0072 NC_011147.1 88487 89257 D 'required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase'; electron transfer flavoprotein FixA 88487..89257 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140920.1 CDS fixB NC_011147.1 89273 90214 D involved in electron transfer during carnitine metabolism; electron transfer flavoprotein FixB 89273..90214 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140921.1 CDS SSPA0074 NC_011147.1 90264 91550 D FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; oxidoreductase FixC 90264..91550 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140922.1 CDS SSPA0075 NC_011147.1 91547 91834 D similar to Salmonella typhi CT18 ferredoxin like protein FixX; ferredoxin like protein FixX 91547..91834 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140923.1 CDS SSPA0076 NC_011147.1 91982 93322 D similar to Salmonella typhi CT18 metabolite transport protein; metabolite transport protein 91982..93322 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140924.1 CDS SSPA0077 NC_011147.1 93411 93641 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 93411..93641 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140925.1 CDS SSPA0078 NC_011147.1 93913 94335 D similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 93913..94335 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140926.1 CDS SSPA0079 NC_011147.1 94559 94849 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(94559..94849) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140927.1 CDS SSPA0080 NC_011147.1 95059 95253 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 95059..95253 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140928.1 CDS SSPA0081 NC_011147.1 95747 97636 D similar to Salmonella typhimurium sulfatase; sulfatase 95747..97636 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140929.1 CDS SSPA0082 NC_011147.1 98714 100576 D transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC 98714..100576 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140930.1 CDS folA NC_011147.1 100775 101254 D catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 100775..101254 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140931.1 CDS apaH NC_011147.1 101360 102208 R 'hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP'; diadenosine tetraphosphatase complement(101360..102208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140932.1 CDS apaG NC_011147.1 102219 102596 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(102219..102596) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140933.1 CDS ksgA NC_011147.1 102599 103420 R catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase complement(102599..103420) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140934.1 CDS pdxA NC_011147.1 103417 104406 R catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase complement(103417..104406) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140935.1 CDS SSPA0089 NC_011147.1 104406 105692 R 'Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB'; peptidyl-prolyl cis-trans isomerase SurA complement(104406..105692) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140936.1 CDS SSPA0090 NC_011147.1 105746 108100 R determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein complement(105746..108100) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140937.1 CDS djlA NC_011147.1 108354 109166 D functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 108354..109166 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140938.1 CDS SSPA0092 NC_011147.1 109261 109920 R catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; 23S rRNA/tRNA pseudouridine synthase A complement(109261..109920) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140939.1 CDS SSPA0093 NC_011147.1 109932 112838 R 'transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA'; ATP-dependent helicase HepA complement(109932..112838) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140940.1 CDS SSPA0094 NC_011147.1 113012 115363 R 'Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C'; DNA polymerase II complement(113012..115363) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140941.1 CDS SSPA0095 NC_011147.1 115703 116143 R similar to Salmonella typhi CT18 IS element transposase; IS element transposase complement(115703..116143) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140942.1 CDS SSPA0096 NC_011147.1 116163 117371 D similar to Salmonella typhi CT18 IS element transposase; IS element transposase 116163..117371 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140943.1 CDS SSPA0098 NC_011147.1 118363 118782 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 118363..118782 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140944.1 CDS araD NC_011147.1 118788 119483 R catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase complement(118788..119483) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140945.1 CDS SSPA0100 NC_011147.1 119624 121126 R catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase complement(119624..121126) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140946.1 CDS SSPA0101 NC_011147.1 121137 122846 R catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase complement(121137..122846) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140947.1 CDS SSPA0102 NC_011147.1 123187 124032 D positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 123187..124032 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140948.1 CDS SSPA0103 NC_011147.1 124151 124918 D similar to Salmonella typhi CT18 DedA family integral membrane protein; DedA family integral membrane protein 124151..124918 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140949.1 CDS thiQ NC_011147.1 124957 125664 R with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit complement(124957..125664) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140950.1 CDS thiP NC_011147.1 125648 127255 R permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein complement(125648..127255) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140951.2 CDS SSPA0106 NC_011147.1 127231 128214 R similar to Salmonella typhi CT18 thiamine-binding periplasmic protein precursor; thiamine-binding periplasmic protein complement(127231..128214) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140952.1 CDS SSPA0107 NC_011147.1 128392 130050 R activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR complement(128392..130050) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140953.1 CDS leuD NC_011147.1 130601 131206 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(130601..131206) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140954.1 CDS SSPA0109 NC_011147.1 131217 132617 R 'dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate'; isopropylmalate isomerase large subunit complement(131217..132617) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140955.1 CDS SSPA0110 NC_011147.1 132620 133711 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(132620..133711) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140956.1 CDS SSPA0111 NC_011147.1 133711 135282 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(133711..135282) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140957.1 CDS SSPA0112 NC_011147.1 135370 135456 R involved in attenuation control of the leuABCD operon in leucine biosynthesis; leu operon leader peptide complement(135370..135456) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140958.1 CDS leuO NC_011147.1 136113 137057 D activator for leuABCD operon; member of LysR family of transcriptional activators; leucine transcriptional activator 136113..137057 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140959.1 CDS SSPA0114 NC_011147.1 137385 139103 D 'catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive'; acetolactate synthase 3 catalytic subunit 137385..139103 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140960.1 CDS ilvH NC_011147.1 139103 139597 D 'with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit'; acetolactate synthase 3 regulatory subunit 139103..139597 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140961.1 CDS SSPA0116 NC_011147.1 139881 140885 D binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 139881..140885 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140962.1 CDS SSPA0117 NC_011147.1 141491 141949 D MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 141491..141949 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140963.1 CDS mraW NC_011147.1 141951 142892 D similar to Salmonella typhi CT18 conserved hypothetical protein; S-adenosyl-methyltransferase MraW 141951..142892 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140964.1 CDS SSPA0119 NC_011147.1 142889 143254 D membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 142889..143254 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140965.1 CDS SSPA0120 NC_011147.1 143270 145036 D similar to Salmonella typhi CT18 penicillin-binding protein 3 precursor; penicillin-binding protein 3 143270..145036 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140966.1 CDS murE NC_011147.1 145023 146510 D involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 145023..146510 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140967.1 CDS murF NC_011147.1 146507 147865 D 'similar to Salmonella typhi CT18 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diami nopimelate--D-alan alanyl ligase'; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 146507..147865 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140968.1 CDS mraY NC_011147.1 147859 148941 D First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 147859..148941 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140969.1 CDS murD NC_011147.1 148944 150260 D UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 148944..150260 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140970.2 CDS SSPA0125 NC_011147.1 150260 151504 D integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 150260..151504 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140971.1 CDS murG NC_011147.1 151501 152568 D UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 151501..152568 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140972.1 CDS murC NC_011147.1 152687 154162 D Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 152687..154162 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140973.1 CDS ddl NC_011147.1 154155 155075 D D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 154155..155075 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140974.1 CDS SSPA0129 NC_011147.1 155077 155907 D involved in septum formation; cell division protein FtsQ 155077..155907 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140975.1 CDS ftsA NC_011147.1 155904 157166 D ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 155904..157166 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140976.1 CDS SSPA0131 NC_011147.1 157227 158378 D 'GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function'; cell division protein FtsZ 157227..158378 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140977.1 CDS lpxC NC_011147.1 158479 159396 D zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 158479..159396 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140978.2 CDS SSPA0133 NC_011147.1 159675 160172 D secM translational pause allows for the initiation of secA translation; SecA regulator SecM 159675..160172 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140979.1 CDS SSPA0134 NC_011147.1 160234 162939 D functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 160234..162939 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140980.1 CDS SSPA0135 NC_011147.1 163091 163486 D 'similar to Salmonella typhi CT18 7,8-dihydro-8-oxoguanine-triphosphatase'; nucleoside triphosphate pyrophosphohydrolase 163091..163486 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140981.1 CDS SSPA0136 NC_011147.1 163520 164509 R similar to Salmonella typhi CT18 aldo/keto reductase; aldo/keto reductase complement(163520..164509) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140982.1 CDS SSPA0137 NC_011147.1 164595 165536 D similar to Salmonella typhi Ty2 LysR-family transcriptional regulator; LysR family transcriptional regulator 164595..165536 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140983.1 CDS SSPA0138 NC_011147.1 165533 165724 R similar to Salmonella typhi CT18 conserved hypothetical protein; zinc-binding protein complement(165533..165724) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140984.1 CDS SSPA0139 NC_011147.1 165734 166477 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(165734..166477) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140985.1 CDS coaE NC_011147.1 166477 167097 R catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase complement(166477..167097) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140986.1 CDS SSPA0141 NC_011147.1 167323 168366 D catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 167323..168366 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140987.1 CDS SSPA0142 NC_011147.1 168397 169599 R similar to Salmonella typhi CT18 protein transport protein HofC; type IV pilin biogenesis protein complement(168397..169599) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140988.1 CDS SSPA0143 NC_011147.1 169589 170974 R similar to Salmonella typhi CT18 protein transport protein HofB; hypothetical protein complement(169589..170974) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140989.1 CDS SSPA0144 NC_011147.1 170984 171421 R similar to Salmonella typhi CT18 prepilin peptidase dependent protein D precursor; major pilin subunit complement(170984..171421) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140990.2 CDS SSPA0145 NC_011147.1 171643 172536 R similar to Salmonella typhi CT18 nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(171643..172536) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140991.1 CDS SSPA0146 NC_011147.1 172624 173187 D similar to Salmonella typhi CT18 AmpD protein (anhydro-N-acetylmuramyl-tripeptide amidase); N-acetyl-anhydromuranmyl-L-alanine amidase 172624..173187 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140992.1 CDS SSPA0147 NC_011147.1 173184 174038 D involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 173184..174038 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140993.1 CDS SSPA0148 NC_011147.1 174130 175080 R similar to Salmonella typhi CT18 putatuve glycosysl hydrolase; glycosyl hydrolase complement(174130..175080) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140994.1 CDS SSPA0149 NC_011147.1 175080 176486 R similar to Salmonella typhi CT18 symporter; symporter complement(175080..176486) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140995.1 CDS SSPA0150 NC_011147.1 176650 178020 R similar to Salmonella typhi CT18 aromatic amino acid transport protein AroP; aromatic amino acid transporter complement(176650..178020) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140996.1 CDS pdhR NC_011147.1 178586 179350 D activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 178586..179350 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140997.1 CDS aceE NC_011147.1 179510 182173 D E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 179510..182173 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140998.1 CDS aceF NC_011147.1 182188 184077 D E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 182188..184077 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002140999.1 CDS SSPA0154 NC_011147.1 184279 185703 D E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 184279..185703 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141000.1 CDS SSPA0155 NC_011147.1 185992 186276 D similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 185992..186276 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141001.1 CDS SSPA0156 NC_011147.1 186314 187105 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(186314..187105) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141002.1 CDS SSPA0157 NC_011147.1 187118 188746 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(187118..188746) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141003.1 CDS SSPA0158 NC_011147.1 189135 191732 D catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 189135..191732 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141004.1 CDS SSPA0159 NC_011147.1 191920 192282 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 191920..192282 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141005.1 CDS SSPA0160 NC_011147.1 192517 193470 D transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 192517..193470 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141006.1 CDS SSPA0161 NC_011147.1 193467 194738 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 193467..194738 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141007.1 CDS pdxA NC_011147.1 194728 195711 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 194728..195711 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141008.1 CDS SSPA0163 NC_011147.1 195721 196488 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 195721..196488 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141009.1 CDS speD NC_011147.1 196518 197312 R S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase complement(196518..197312) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141010.1 CDS SSPA0165 NC_011147.1 197333 198193 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(197333..198193) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141011.1 CDS SSPA0166 NC_011147.1 198300 198647 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(198300..198647) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141012.1 CDS SSPA0167 NC_011147.1 198849 200459 D laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; multicopper oxidase 198849..200459 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141013.1 CDS SSPA0168 NC_011147.1 200537 202927 R similar to Salmonella typhi CT18 glucose dehydrogenase; glucose dehydrogenase complement(200537..202927) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141014.1 CDS SSPA0169 NC_011147.1 203133 203669 D similar to Salmonella typhi CT18 hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 203133..203669 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141015.1 CDS SSPA0170 NC_011147.1 203727 204389 R catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase complement(203727..204389) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141016.1 CDS SSPA0171 NC_011147.1 204498 205424 D similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; hypothetical protein 204498..205424 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141017.1 CDS SSPA0172 NC_011147.1 205421 206191 D similar to Salmonella typhi CT18 ABC transporter integral membrane protein; ABC transporter 205421..206191 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141018.1 CDS SSPA0173 NC_011147.1 206296 206736 D similar to Salmonella typhi CT18 PTS system IIA component; PTS system transporter subunit IIA 206296..206736 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141019.1 CDS SSPA0174 NC_011147.1 206804 208027 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 206804..208027 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141020.1 CDS SSPA0175 NC_011147.1 208029 209090 R similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein complement(208029..209090) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141021.1 CDS SSPA0176 NC_011147.1 209102 209662 R similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein complement(209102..209662) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141022.1 CDS SSPA0177 NC_011147.1 209720 210277 R similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein complement(209720..210277) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141023.1 CDS SSPA0178 NC_011147.1 210304 210876 R similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein complement(210304..210876) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141024.1 CDS SSPA0179 NC_011147.1 210911 213508 R similar to the fimbrial usher protein PapC; outer membrane usher protein complement(210911..213508) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141025.1 CDS SSPA0180 NC_011147.1 213576 214328 R similar to Salmonella typhimurium fimbriae; chaparone; chaperone protein EcpD complement(213576..214328) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141026.1 CDS SSPA0181 NC_011147.1 214415 215020 R similar to |24528001|emb|CAD33728.1| F17-like fimbrial subunit [Escherichia coli]; major fimbrial subunit complement(214415..215020) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141027.1 CDS SSPA0182 NC_011147.1 215297 215677 R Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase complement(215297..215677) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141028.1 CDS panC NC_011147.1 215772 216626 R catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase complement(215772..216626) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141029.1 CDS panB NC_011147.1 216752 217543 R 'catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate'; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(216752..217543) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141030.1 CDS SSPA0185 NC_011147.1 217664 218143 R 'catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP'; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(217664..218143) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141031.1 CDS pcnB NC_011147.1 218140 219558 R Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase I complement(218140..219558) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141032.1 CDS SSPA0187 NC_011147.1 219699 220595 R 'this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu'; glutamyl-Q tRNA(Asp) synthetase complement(219699..220595) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141033.1 CDS dksA NC_011147.1 220664 221119 R similar to Salmonella typhi CT18 dosage-dependent dnaK suppressor protein; RNA polymerase-binding transcription factor complement(220664..221119) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141034.1 CDS SSPA0189 NC_011147.1 221296 222000 R Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A complement(221296..222000) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141035.1 CDS SSPA0190 NC_011147.1 222017 222547 R similar to Salmonella typhi CT18 2'-5' RNA ligase; 2'-5' RNA ligase complement(222017..222547) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141036.1 CDS SSPA0191 NC_011147.1 222575 225049 D similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 222575..225049 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141037.1 CDS mrcB NC_011147.1 225190 227712 D 'bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell'; penicillin-binding protein 1b 225190..227712 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141038.1 CDS SSPA0193 NC_011147.1 230281 231078 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 230281..231078 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141039.1 CDS SSPA0194 NC_011147.1 231078 231968 D Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 231078..231968 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141040.1 CDS SSPA0195 NC_011147.1 231965 234022 D part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease 231965..234022 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141042.1 CDS SSPA0197 NC_011147.1 238284 239036 D similar to Salmonella typhimurium periplasmic fimbrial chaperone; periplasmic fimbrial chaperone 238284..239036 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141043.1 CDS SSPA0198 NC_011147.1 239100 239567 D similar to Salmonella typhimurium putaive minor fimbrial subunit; minor fimbrial subunit 239100..239567 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141044.1 CDS SSPA0199 NC_011147.1 240040 240570 D similar to Salmonella typhimurium minor fimbrial subunit; adhesin; minor fimbrial subunit; adhesin 240040..240570 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141045.1 CDS SSPA0200 NC_011147.1 240570 241415 D similar to |7388520|sp|P76498|YFCO_ECOLI Hypothetical protein yfcO precursor; hypothetical protein 240570..241415 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141046.1 CDS SSPA0201 NC_011147.1 241523 242803 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(241523..242803) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141047.1 CDS SSPA0202 NC_011147.1 242973 244394 D Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; chloride channel protein 242973..244394 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141048.1 CDS SSPA0203 NC_011147.1 244431 244820 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 244431..244820 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141049.1 CDS SSPA0204 NC_011147.1 244921 245544 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(244921..245544) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141050.1 CDS SSPA0205 NC_011147.1 245581 246381 R solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF complement(245581..246381) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141051.1 CDS SSPA0206 NC_011147.1 246374 247072 R enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(246374..247072) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141052.1 CDS dgt NC_011147.1 247157 248674 D forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 247157..248674 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141053.1 CDS SSPA0208 NC_011147.1 248804 250231 D protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 248804..250231 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141054.1 CDS SSPA0209 NC_011147.1 250384 251541 D 'regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization'; carbohydrate diacid transcriptional activator CdaR 250384..251541 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141055.1 CDS SSPA0210 NC_011147.1 251630 252016 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(251630..252016) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141056.1 CDS SSPA0211 NC_011147.1 252263 253564 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 252263..253564 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141057.1 CDS dapD NC_011147.1 253601 254425 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(253601..254425) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141058.1 CDS SSPA0213 NC_011147.1 254455 257127 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(254455..257127) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141059.1 CDS SSPA0214 NC_011147.1 257240 258034 R 'catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn'; methionine aminopeptidase complement(257240..258034) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141060.1 CDS rpsB NC_011147.1 258485 259210 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 258485..259210 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141061.1 CDS tsf NC_011147.1 259468 260319 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 259468..260319 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141062.1 CDS pyrH NC_011147.1 260464 261189 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 260464..261189 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141063.1 CDS frr NC_011147.1 261336 261893 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 261336..261893 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141064.1 CDS SSPA0219 NC_011147.1 262035 263231 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 262035..263231 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141065.1 CDS SSPA0220 NC_011147.1 263544 264302 D catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 263544..264302 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141066.1 CDS cdsA NC_011147.1 264315 265172 D catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase 264315..265172 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141067.1 CDS SSPA0222 NC_011147.1 265184 266536 D catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 265184..266536 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141068.1 CDS SSPA0223 NC_011147.1 266568 268979 D 'part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins'; outer membrane protein assembly factor YaeT 266568..268979 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141069.1 CDS SSPA0224 NC_011147.1 269102 269587 D similar to Salmonella typhi Ty2 outer membrane protein OmpH precursor; periplasmic chaperone 269102..269587 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141070.1 CDS lpxD NC_011147.1 269591 270616 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 269591..270616 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141071.1 CDS fabZ NC_011147.1 270722 271177 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 270722..271177 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141072.1 CDS SSPA0227 NC_011147.1 271181 271969 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 271181..271969 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141073.1 CDS lpxB NC_011147.1 271969 273117 D 'catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM'; lipid-A-disaccharide synthase 271969..273117 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141074.1 CDS rnhB NC_011147.1 273114 273710 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 273114..273710 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141075.1 CDS dnaE NC_011147.1 273734 277216 D catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 273734..277216 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141076.1 CDS SSPA0231 NC_011147.1 277229 278188 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 277229..278188 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141077.1 CDS SSPA0232 NC_011147.1 278367 280130 D similar to Salmonella typhi CT18 secreted chitinase; secreted chitinase 278367..280130 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141078.1 CDS SSPA0233 NC_011147.1 280206 282347 D similar to Salmonella typhi CT18 lysine decarboxylase; lysine decarboxylase 280206..282347 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141079.1 CDS SSPA0234 NC_011147.1 282403 282792 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 282403..282792 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141080.2 CDS tilS NC_011147.1 282855 284147 D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 282855..284147 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141081.1 CDS SSPA0236 NC_011147.1 284231 284485 R Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator complement(284231..284485) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141082.1 CDS SSPA0237 NC_011147.1 284478 284696 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(284478..284696) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141083.1 CDS SSPA0238 NC_011147.1 284876 285421 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 284876..285421 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141084.1 CDS SSPA0239 NC_011147.1 285418 285840 D similar to Salmonella typhi CT18 release factor; peptidyl-tRNA hydrolase domain-containing protein 285418..285840 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141085.1 CDS SSPA0240 NC_011147.1 285872 286573 D similar to Salmonella typhi Ty2 copper homeostasis protein CutF precursor; copper homeostasis/adhesion lipoprotein 285872..286573 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141086.1 CDS SSPA0241 NC_011147.1 286647 288365 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(286647..288365) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141087.1 CDS SSPA0242 NC_011147.1 288476 289183 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(288476..289183) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141088.1 CDS rcsF NC_011147.1 289180 289584 R similar to Salmonella typhi CT18 RcsF protein; outer membrane lipoprotein complement(289180..289584) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141089.1 CDS metQ NC_011147.1 289703 290518 R similar to Salmonella typhi CT18 lipoprotein precursor; DL-methionine transporter substrate-binding subunit complement(289703..290518) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141090.1 CDS SSPA0245 NC_011147.1 290557 291195 R part of the MetNIQ methionine uptake system; DL-methionine transporter permease complement(290557..291195) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141091.1 CDS metN NC_011147.1 291203 292234 R part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit complement(291203..292234) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141092.1 CDS SSPA0247 NC_011147.1 292424 292990 D 'Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate'; D,D-heptose 1,7-bisphosphate phosphatase 292424..292990 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141093.1 CDS SSPA0248 NC_011147.1 298958 299413 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 298958..299413 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141094.1 CDS SSPA0249 NC_011147.1 299517 300818 D similar to Salmonella typhi CT18 alpha-ketoglutarate permease; alpha-ketoglutarate transporter 299517..300818 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141095.1 CDS SSPA0250 NC_011147.1 300815 301138 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(300815..301138) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141096.1 CDS pssA NC_011147.1 301183 302538 R catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase complement(301183..302538) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141097.1 CDS SSPA0252 NC_011147.1 302653 305313 R similar to Salmonella typhi CT18 acyl-CoA synthetase; acyl-CoA synthetase complement(302653..305313) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141098.1 CDS SSPA0253 NC_011147.1 305367 306047 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(305367..306047) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141099.1 CDS SSPA0254 NC_011147.1 306120 306539 R similar to Salmonella typhi Ty2 thioredoxin 2; thioredoxin 2 complement(306120..306539) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141100.1 CDS SSPA0255 NC_011147.1 306743 307780 D similar to Salmonella typhi CT18 RNA methyltransferase; methyltransferase 306743..307780 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141101.1 CDS SSPA0256 NC_011147.1 307896 308585 R Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase complement(307896..308585) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141102.1 CDS SSPA0257 NC_011147.1 308904 309287 D stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 308904..309287 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141103.1 CDS SSPA0258 NC_011147.1 309349 309936 R similar to Salmonella typhi CT18 membrane protein; neutral amino-acid efflux protein complement(309349..309936) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141104.1 CDS SSPA0259 NC_011147.1 309994 310938 D 'similar to Salmonella typhimurium transcriptional regulator, LysR family'; transcriptional regulator 309994..310938 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141105.1 CDS SSPA0260 NC_011147.1 310956 312290 R facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB complement(310956..312290) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141106.1 CDS SSPA0261 NC_011147.1 312420 313157 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 312420..313157 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141107.1 CDS SSPA0262 NC_011147.1 313142 314761 R catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase complement(313142..314761) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141108.1 CDS SSPA0263 NC_011147.1 315189 315764 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 315189..315764 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141109.1 CDS SSPA0264 NC_011147.1 315796 316446 D similar to Salmonella typhi CT18 sigma-E factor negative regulatory protein; anti-RNA polymerase sigma factor SigE 315796..316446 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141110.1 CDS rseB NC_011147.1 316446 317402 D periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 316446..317402 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141111.1 CDS SSPA0266 NC_011147.1 317399 317878 D involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 317399..317878 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141112.1 CDS SSPA0267 NC_011147.1 318130 319929 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 318130..319929 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141113.1 CDS SSPA0268 NC_011147.1 319946 320920 D catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 319946..320920 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141114.1 CDS rnc NC_011147.1 321194 321874 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 321194..321874 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141115.1 CDS era NC_011147.1 321871 322776 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 321871..322776 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141116.1 CDS recO NC_011147.1 322788 323516 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 322788..323516 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141117.1 CDS SSPA0272 NC_011147.1 323528 324259 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 323528..324259 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141118.1 CDS acpS NC_011147.1 324259 324639 D 'Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids'; 4'-phosphopantetheinyl transferase 324259..324639 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141119.1 CDS SSPA0274 NC_011147.1 324751 325011 R similar to Salmonella typhi CT18 ferredoxin; ferredoxin complement(324751..325011) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141120.1 CDS SSPA0275 NC_011147.1 325049 325975 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(325049..325975) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141121.1 CDS SSPA0276 NC_011147.1 326089 327285 D similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 326089..327285 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141122.1 CDS SSPA0277 NC_011147.1 327358 328224 D similar to Salmonella typhi CT18 oxidoreductase; 2-dehydropantoate 2-reductase 327358..328224 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141123.1 CDS SSPA0278 NC_011147.1 328263 329111 R similar to Salmonella typhi CT18 transcriptional regulator; DNA-binding transcriptional regulator complement(328263..329111) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141124.1 CDS murQ NC_011147.1 329227 330120 D catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 329227..330120 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141125.1 CDS SSPA0280 NC_011147.1 330131 331492 D similar to Salmonella typhi CT18 PTS system IIBC component; PTS system transporter subunit IIBC 330131..331492 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141126.1 CDS SSPA0281 NC_011147.1 332156 332707 D similar to Salmonella typhi CT18 conserved hypothetical protein; tRNA-specific adenosine deaminase 332156..332707 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141127.1 CDS SSPA0282 NC_011147.1 332758 334302 R 'YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function'; transglycosylase complement(332758..334302) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141128.1 CDS SSPA0283 NC_011147.1 334303 334533 R similar to Salmonella typhimurium periplasmic protein; hypothetical protein complement(334303..334533) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141129.1 CDS SSPA0284 NC_011147.1 334558 338445 D catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 334558..338445 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144947.1 CDS SSPA0285 NC_011147.1 339083 340525 D sensor histidine kinase 339083..340525 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141131.1 CDS SSPA0286 NC_011147.1 340527 341291 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 340527..341291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141132.1 CDS SSPA0287 NC_011147.1 341288 342625 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 341288..342625 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141133.1 CDS SSPA0288 NC_011147.1 342702 343040 D 'indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA'; nitrogen regulatory protein P-II 1 342702..343040 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141134.1 CDS SSPA0289 NC_011147.1 343089 344549 R similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein complement(343089..344549) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141135.1 CDS SSPA0290 NC_011147.1 344605 346749 R similar to Salmonella typhi CT18 lysine decarboxylase; lysine decarboxylase complement(344605..346749) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141136.1 CDS cadB NC_011147.1 346832 348163 R antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; lysine/cadaverine antiporter complement(346832..348163) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141137.1 CDS SSPA0292 NC_011147.1 350249 351439 R flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase complement(350249..351439) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141138.1 CDS glyA NC_011147.1 351764 353017 D 'catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate'; serine hydroxymethyltransferase 351764..353017 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141139.1 CDS SSPA0294 NC_011147.1 353213 354352 D transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter 353213..354352 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141140.1 CDS SSPA0295 NC_011147.1 354347 355624 R similar to Salmonella typhi CT18 stationary phase inducible protein CsiE; stationary phase inducible protein CsiE complement(354347..355624) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141141.1 CDS SSPA0296 NC_011147.1 355750 356388 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 355750..356388 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141142.1 CDS SSPA0297 NC_011147.1 356379 357365 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 356379..357365 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141143.1 CDS SSPA0298 NC_011147.1 357366 358379 R similar to Salmonella typhi CT18 anaerobic sulfite reductase subunit C; anaerobic sulfite reductase subunit C complement(357366..358379) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141144.1 CDS SSPA0299 NC_011147.1 358390 359208 R with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide; anaerobic sulfite reductase subunit B complement(358390..359208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141145.1 CDS SSPA0300 NC_011147.1 359212 360255 R similar to Salmonella typhi CT18 anaerobic sulfite reductase subunit A; anaerobic sulfite reductase subunit A complement(359212..360255) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141146.1 CDS SSPA0301 NC_011147.1 360437 361315 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(360437..361315) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141147.1 CDS SSPA0302 NC_011147.1 361460 362263 R similar to Salmonella typhi CT18 extragenic suppressor protein SuhB; inositol monophosphatase complement(361460..362263) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141148.1 CDS SSPA0303 NC_011147.1 362382 363113 D similar to Salmonella typhi CT18 RNA methyltransferase; RNA methyltransferase 362382..363113 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141149.1 CDS SSPA0304 NC_011147.1 363291 363785 D regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 363291..363785 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141150.1 CDS SSPA0305 NC_011147.1 363966 365180 D catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 363966..365180 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141151.1 CDS SSPA0306 NC_011147.1 365208 365594 D similar to Salmonella typhi CT18 NifU-like protein; scaffold protein 365208..365594 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141152.1 CDS iscA NC_011147.1 365623 365946 D forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 365623..365946 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141153.1 CDS hscB NC_011147.1 366143 366658 D J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 366143..366658 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141154.1 CDS hscA NC_011147.1 366671 368521 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 366671..368521 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141155.1 CDS SSPA0310 NC_011147.1 368523 368858 D similar to Salmonella typhi CT18 ferredoxin; ferredoxin 368523..368858 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141156.1 CDS SSPA0311 NC_011147.1 368870 369070 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 368870..369070 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141157.1 CDS SSPA0312 NC_011147.1 369124 370407 D catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 369124..370407 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141158.1 CDS SSPA0313 NC_011147.1 370508 371293 D enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 370508..371293 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141159.1 CDS SSPA0314 NC_011147.1 371862 372530 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(371862..372530) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141160.1 CDS sseA NC_011147.1 372776 373618 R catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; 3-mercaptopyruvate sulfurtransferase complement(372776..373618) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141161.1 CDS SSPA0316 NC_011147.1 373827 378761 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 373827..378761 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141162.1 CDS SSPA0317 NC_011147.1 378762 381077 D penicillin-insensitive transglycosylase/transpeptidase; penicillin-binding protein 1C 378762..381077 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141163.1 CDS SSPA0318 NC_011147.1 383609 384238 D similar to Salmonella typhi CT18 anaerobic reductase component; anaerobic reductase subunit 383609..384238 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141164.1 CDS SSPA0319 NC_011147.1 384231 385040 D similar to Salmonella typhi CT18 anaerobic reductase component; anaerobic reductase subunit 384231..385040 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141165.1 CDS SSPA0320 NC_011147.1 385040 385903 D similar to Salmonella typhi CT18 polyferredoxin; polyferredoxin 385040..385903 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141166.1 CDS ndk NC_011147.1 386024 386455 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 386024..386455 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141167.1 CDS SSPA0322 NC_011147.1 386662 387828 D 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 386662..387828 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141168.1 CDS SSPA0323 NC_011147.1 388120 389124 D similar to Salmonella typhi CT18 DNA-binding protein; cytoskeletal protein RodZ 388120..389124 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141169.1 CDS ispG NC_011147.1 389151 390269 D 'catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis'; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 389151..390269 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141170.1 CDS hisS NC_011147.1 390380 391654 D 'catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG'; histidyl-tRNA synthetase 390380..391654 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141171.1 CDS SSPA0326 NC_011147.1 391668 392288 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 391668..392288 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141172.1 CDS SSPA0327 NC_011147.1 392299 393477 D 'with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis'; outer membrane protein assembly complex subunit YfgL 392299..393477 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141173.1 CDS engA NC_011147.1 393594 395066 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 393594..395066 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141174.1 CDS SSPA0329 NC_011147.1 395155 395376 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 395155..395376 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141175.1 CDS SSPA0330 NC_011147.1 397935 398900 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 397935..398900 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141176.1 CDS SSPA0331 NC_011147.1 399020 405412 D similar to Salmonella typhi Ty2 exported protein; hypothetical protein 399020..405412 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141177.1 CDS xseA NC_011147.1 418816 420165 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(418816..420165) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141178.1 CDS SSPA0333 NC_011147.1 420326 421792 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 420326..421792 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141179.1 CDS guaA NC_011147.1 421862 423439 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 421862..423439 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141180.1 CDS SSPA0335 NC_011147.1 423527 423685 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 423527..423685 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141181.1 CDS SSPA0336 NC_011147.1 424678 425217 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(424678..425217) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141182.1 CDS SSPA0337 NC_011147.1 425233 425748 R similar to Salmonella typhimurium outer membrane lipoprotein; outer membrane lipoprotein complement(425233..425748) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141183.1 CDS SSPA0338 NC_011147.1 426052 426291 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 426052..426291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141184.1 CDS SSPA0339 NC_011147.1 426362 426499 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 426362..426499 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141185.1 CDS SSPA0340 NC_011147.1 426596 428809 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 426596..428809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141186.1 CDS SSPA0341 NC_011147.1 428845 430386 R similar to Salmonella typhi CT18 exopolyphosphatase; exopolyphosphatase complement(428845..430386) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141187.1 CDS SSPA0342 NC_011147.1 430391 432457 R catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase complement(430391..432457) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141188.1 CDS purN NC_011147.1 432646 433284 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(432646..433284) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141189.1 CDS SSPA0344 NC_011147.1 433284 434321 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(433284..434321) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141190.1 CDS upp NC_011147.1 434734 435360 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 434734..435360 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141191.1 CDS SSPA0346 NC_011147.1 435448 436737 D similar to Salmonella typhi CT18 uracil permease (uracil transporter); uracil transporter 435448..436737 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141192.1 CDS SSPA0347 NC_011147.1 436808 437533 D 'controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP'; DNA replication initiation factor 436808..437533 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141193.1 CDS SSPA0348 NC_011147.1 437560 437919 R similar to Salmonella typhi Ty2 arsenate reductase; arsenate reductase complement(437560..437919) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141194.1 CDS SSPA0349 NC_011147.1 437959 439422 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(437959..439422) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141195.1 CDS SSPA0350 NC_011147.1 441038 442162 D similar to |16124105|ref|NP_407418.1| regulatory protein [Yersinia pestis]; hypothetical protein 441038..442162 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141196.1 CDS SSPA0351 NC_011147.1 442230 443498 D similar to Salmonella typhi CT18 permease; permease 442230..443498 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141197.1 CDS SSPA0352 NC_011147.1 443504 444643 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 443504..444643 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141198.1 CDS bcp NC_011147.1 444690 445160 R bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase complement(444690..445160) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141199.1 CDS gcvR NC_011147.1 445160 445732 R negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor complement(445160..445732) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141200.1 CDS SSPA0355 NC_011147.1 445878 446756 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 445878..446756 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141201.1 CDS SSPA0356 NC_011147.1 446773 447807 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 446773..447807 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141202.1 CDS SSPA0357 NC_011147.1 447982 448695 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 447982..448695 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141203.1 CDS SSPA0358 NC_011147.1 448826 449689 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 448826..449689 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141204.1 CDS SSPA0359 NC_011147.1 449705 451723 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 449705..451723 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141205.1 CDS SSPA0360 NC_011147.1 451750 451950 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(451750..451950) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141206.1 CDS SSPA0361 NC_011147.1 451978 453105 R 'dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.'; succinyl-diaminopimelate desuccinylase complement(451978..453105) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141207.1 CDS SSPA0362 NC_011147.1 453109 453465 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(453109..453465) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141208.1 CDS SSPA0363 NC_011147.1 454039 457152 R similar to Salmonella typhi CT18 efflux pump; aminoglycoside/multidrug efflux system complement(454039..457152) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141209.1 CDS SSPA0364 NC_011147.1 459225 461186 D 'unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic)'; oxidoreductase Fe-S binding subunit 459225..461186 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141210.1 CDS SSPA0365 NC_011147.1 461634 462932 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(461634..462932) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141211.1 CDS SSPA0366 NC_011147.1 463136 463711 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 463136..463711 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141212.1 CDS SSPA0367 NC_011147.1 463836 464879 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 463836..464879 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141213.1 CDS SSPA0368 NC_011147.1 465007 465237 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 465007..465237 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141214.1 CDS SSPA0369 NC_011147.1 465300 467300 R 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase'; transketolase complement(465300..467300) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141215.1 CDS SSPA0370 NC_011147.1 467320 468270 R similar to Salmonella typhi CT18 transaldolase A; transaldolase A complement(467320..468270) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141216.1 CDS SSPA0371 NC_011147.1 468542 470821 D NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 468542..470821 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141217.1 CDS SSPA0372 NC_011147.1 471239 471574 D similar to Salmonella typhi CT18 ethanolamine utilization protein EutS; ethanolamine utilization protein EutS 471239..471574 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141218.1 CDS SSPA0373 NC_011147.1 471587 472066 D similar to Salmonella typhimurium ethanolamine utilization protein; ethanolamine utilization protein 471587..472066 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141219.1 CDS SSPA0374 NC_011147.1 472044 472733 D similar to Salmonella typhimurium ethanolamine utilization protein; ethanolamine utilization protein 472044..472733 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141220.1 CDS SSPA0375 NC_011147.1 472730 473533 D similar to Salmonella typhi CT18 cobalamin adenosyltransferase; cobalamin adenosyltransferase 472730..473533 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141221.1 CDS eutD NC_011147.1 473530 474546 D in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta; phosphotransacetylase 473530..474546 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141222.1 CDS SSPA0377 NC_011147.1 474587 474877 D similar to Salmonella typhi Ty2 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN 474587..474877 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141223.1 CDS SSPA0378 NC_011147.1 474930 475277 D similar to Salmonella typhi CT18 ethanolamine utilization protein EutN; ethanolamine utilization protein EutN 474930..475277 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141224.1 CDS SSPA0379 NC_011147.1 475289 476692 D similar to Salmonella typhi CT18 aldehyde dehydrogenase; aldehyde dehydrogenase 475289..476692 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141225.1 CDS SSPA0380 NC_011147.1 476703 477542 D similar to Salmonella typhi CT18 ethanolamine utilization protein EutJ; ethanolamine utilization protein EutJ 476703..477542 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141226.1 CDS SSPA0381 NC_011147.1 477532 478719 D similar to Salmonella typhi CT18 alchohol dehydrogenase; alchohol dehydrogenase 477532..478719 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141227.1 CDS SSPA0382 NC_011147.1 478839 480065 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 478839..480065 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141228.1 CDS eutA NC_011147.1 480062 481285 D ethanolamine utilization protein EutA; reactivating factor for ethanolamine ammonia lyase 480062..481285 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141229.1 CDS SSPA0384 NC_011147.1 481297 482658 D similar to Salmonella typhi CT18 ethanolamine ammonia-lyase heavy chain; ethanolamine ammonia-lyase heavy subunit 481297..482658 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141230.1 CDS SSPA0385 NC_011147.1 482677 483573 D catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit 482677..483573 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141231.1 CDS SSPA0386 NC_011147.1 483583 484242 D similar to Salmonella typhi CT18 ethanolamine utilization protein EutL; ethanolamine utilization protein EutL 483583..484242 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141232.1 CDS SSPA0387 NC_011147.1 484255 484749 D similar to Salmonella typhi CT18 ethanolamine utilization protein EutK; ethanolamine utilization protein EutK 484255..484749 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141233.1 CDS SSPA0388 NC_011147.1 484797 485849 D activates the transcription of the ethanolamine utilization operon; transcriptional regulator EutR 484797..485849 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141234.1 CDS SSPA0389 NC_011147.1 486048 486974 R catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase complement(486048..486974) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141235.1 CDS SSPA0390 NC_011147.1 486977 487846 R similar to Salmonella typhi CT18 probable N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase I complement(486977..487846) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141236.1 CDS SSPA0391 NC_011147.1 488059 488484 D similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 488059..488484 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141237.1 CDS SSPA0392 NC_011147.1 488471 488920 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 488471..488920 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141238.1 CDS SSPA0393 NC_011147.1 488982 489557 D similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 488982..489557 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141239.1 CDS SSPA0394 NC_011147.1 489652 490551 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 489652..490551 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141240.1 CDS SSPA0395 NC_011147.1 490789 491580 D similar to Salmonella typhi Ty2 oxidoreductase; short chain dehydrogenase 490789..491580 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141241.1 CDS SSPA0396 NC_011147.1 491738 492754 D similar to Salmonella typhi CT18 thiosulphate-binding protein precursor; thiosulfate transporter subunit 491738..492754 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141242.1 CDS SSPA0397 NC_011147.1 492754 493587 D similar to Salmonella typhi CT18 sulphate transport system permease protein CysT; sulfate/thiosulfate transporter subunit 492754..493587 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141243.1 CDS cysW NC_011147.1 493587 494462 D Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease subunit 493587..494462 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141244.1 CDS SSPA0399 NC_011147.1 494452 495546 D similar to Salmonella typhi CT18 sulphate transport ATP-binding protein CysA; sulfate/thiosulfate transporter subunit 494452..495546 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141245.1 CDS cysM NC_011147.1 495667 496578 D catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 495667..496578 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141246.1 CDS SSPA0401 NC_011147.1 496611 496988 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(496611..496988) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141247.1 CDS SSPA0402 NC_011147.1 497047 497688 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(497047..497688) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141248.1 CDS SSPA0403 NC_011147.1 497703 498995 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(497703..498995) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141249.1 CDS pdxK NC_011147.1 499078 499944 D catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxal kinase 499078..499944 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141250.1 CDS SSPA0405 NC_011147.1 500343 500852 R functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter complement(500343..500852) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141251.1 CDS SSPA0406 NC_011147.1 500893 502620 R 'Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system'; phosphoenolpyruvate-protein phosphotransferase complement(500893..502620) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141252.1 CDS SSPA0407 NC_011147.1 502669 502926 R similar to Salmonella typhi CT18 phosphocarrier protein HPr; PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr complement(502669..502926) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141253.1 CDS SSPA0408 NC_011147.1 503310 504281 R CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A complement(503310..504281) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141254.1 CDS SSPA0409 NC_011147.1 504593 505354 R role in sulfur assimilation; sulfate transport protein CysZ complement(504593..505354) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141255.1 CDS SSPA0410 NC_011147.1 505586 506572 D interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 505586..506572 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141256.1 CDS ligA NC_011147.1 506644 508659 D this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 506644..508659 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141257.1 CDS SSPA0412 NC_011147.1 508652 508879 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 508652..508879 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141258.1 CDS SSPA0413 NC_011147.1 508876 509874 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(508876..509874) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141259.1 CDS SSPA0414 NC_011147.1 509964 510890 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 509964..510890 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141260.1 CDS gltX NC_011147.1 511734 513149 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 511734..513149 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141261.1 CDS SSPA0416 NC_011147.1 513203 513595 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(513203..513595) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141262.1 CDS SSPA0417 NC_011147.1 513597 513959 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(513597..513959) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141263.1 CDS SSPA0418 NC_011147.1 514447 516636 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 514447..516636 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141264.1 CDS SSPA0419 NC_011147.1 518056 519297 D similar to Salmonella typhi CT18 manganese transport protein MntH; manganese transport protein MntH 518056..519297 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141265.1 CDS SSPA0420 NC_011147.1 519358 519684 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(519358..519684) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141266.1 CDS SSPA0421 NC_011147.1 519798 520796 R similar to Salmonella typhi CT18 ion-channel protein; ion-channel protein complement(519798..520796) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141267.1 CDS SSPA0422 NC_011147.1 520976 522628 D similar to Salmonella typhi CT18 decarboxylase; decarboxylase 520976..522628 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141268.1 CDS SSPA0423 NC_011147.1 522648 523883 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(522648..523883) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141269.1 CDS glk NC_011147.1 524087 525052 D catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 524087..525052 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141270.1 CDS SSPA0425 NC_011147.1 525775 527013 D similar to Salmonella typhi CT18 aminotransferase; aminotransferase 525775..527013 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141271.1 CDS SSPA0426 NC_011147.1 527537 528457 R Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase complement(527537..528457) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141272.1 CDS SSPA0427 NC_011147.1 528978 529220 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 528978..529220 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141273.1 CDS SSPA0428 NC_011147.1 529458 530849 R similar to Salmonella typhi CT18 phosphoglycerate transporter protein; phosphoglycerate transporter protein complement(529458..530849) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141274.1 CDS SSPA0429 NC_011147.1 531285 532478 D similar to Salmonella typhi CT18 phosphoglycerate transport regulatory protein PgtC precursor; phosphoglycerate transport regulatory protein PgtC 531285..532478 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141275.1 CDS SSPA0430 NC_011147.1 534472 535719 D similar to Salmonella typhi CT18 phosphoglycerate transport system transcriptional regulatory protein PgtA; phosphoglycerate transport system transcriptional regulatory protein PgtA 534472..535719 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141276.1 CDS SSPA0431 NC_011147.1 535987 536925 D outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves the autotransporter IcsA; outer membrane protease 535987..536925 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141277.1 CDS SSPA0432 NC_011147.1 538406 540328 R similar to Salmonella typhi CT18 lipopolysaccharide modification acyltransferase; lipopolysaccharide modification acyltransferase complement(538406..540328) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141278.1 CDS SSPA0433 NC_011147.1 540345 540599 R similar to Salmonella typhi CT18 bactoprenol glucosyl transferase; bactoprenol glucosyl transferase complement(540345..540599) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141279.1 CDS SSPA0434 NC_011147.1 540568 540957 R similar to Salmonella typhi Ty2 bactoprenol-linked glucose transferase; bactoprenol-linked glucose transferase complement(540568..540957) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141280.1 CDS SSPA0435 NC_011147.1 542200 543141 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(542200..543141) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141281.1 CDS SSPA0436 NC_011147.1 543430 544185 D similar to Salmonella typhi CT18 VacJ lipoprotein precursor; VacJ lipoprotein 543430..544185 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141282.1 CDS SSPA0437 NC_011147.1 544246 545559 R similar to Salmonella typhi CT18 long-chain fatty acid transport protein precursor; long-chain fatty acid outer membrane transporter complement(544246..545559) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141283.1 CDS SSPA0438 NC_011147.1 545924 546208 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 545924..546208 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141284.1 CDS fadI NC_011147.1 546385 547695 D FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 546385..547695 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141285.1 CDS fadJ NC_011147.1 547695 549842 D multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 547695..549842 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141286.1 CDS SSPA0441 NC_011147.1 550051 550536 D similar to Salmonella typhi CT18 phosphohistidine phosphatase; phosphohistidine phosphatase 550051..550536 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141287.1 CDS SSPA0442 NC_011147.1 550636 551187 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(550636..551187) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141289.1 CDS SSPA0444 NC_011147.1 552321 553406 D catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 552321..553406 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141290.1 CDS mepA NC_011147.1 553410 554234 D D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 553410..554234 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141291.1 CDS SSPA0446 NC_011147.1 554234 555043 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 554234..555043 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141292.1 CDS SSPA0447 NC_011147.1 555043 555591 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 555043..555591 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141293.1 CDS SSPA0448 NC_011147.1 555624 555899 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 555624..555899 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141294.2 CDS mnmC NC_011147.1 555947 557947 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(555947..557947) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141295.1 CDS SSPA0450 NC_011147.1 558107 559321 D 'FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP'; 3-oxoacyl-ACP synthase 558107..559321 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141296.1 CDS SSPA0451 NC_011147.1 559419 560075 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 559419..560075 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141297.1 CDS SSPA0452 NC_011147.1 560142 560660 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(560142..560660) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141298.1 CDS SSPA0453 NC_011147.1 560660 561028 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(560660..561028) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141299.1 CDS SSPA0454 NC_011147.1 561197 561445 R similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein complement(561197..561445) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141300.1 CDS SSPA0455 NC_011147.1 561618 561992 D similar to Salmonella typhi CT18 bacteriophage protein; bacteriophage protein 561618..561992 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141301.1 CDS SSPA0456 NC_011147.1 562172 563350 D similar to Salmonella typhi CT18 transmembrane transporter; hypothetical protein 562172..563350 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141302.1 CDS flk NC_011147.1 563347 564348 R in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; flagella biosynthesis regulator complement(563347..564348) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141303.1 CDS SSPA0458 NC_011147.1 564452 565588 D similar to Salmonella typhi CT18 erythronate-4-phosphate dehydrogenase; erythronate-4-phosphate dehydrogenase 564452..565588 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141304.1 CDS SSPA0459 NC_011147.1 565656 566669 D similar to Salmonella typhi CT18 semialdehyde dehydrogenase; semialdehyde dehydrogenase 565656..566669 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141305.1 CDS truA NC_011147.1 566669 567481 D 'mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability'; tRNA pseudouridine synthase A 566669..567481 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141306.1 CDS SSPA0461 NC_011147.1 567530 568189 D similar to Salmonella typhi CT18 DedA protein (dsg-1 protein); hypothetical protein 567530..568189 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141307.1 CDS SSPA0462 NC_011147.1 568339 569253 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 568339..569253 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141308.1 CDS SSPA0463 NC_011147.1 569321 570589 D similar to Salmonella typhi CT18 folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 569321..570589 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141309.1 CDS SSPA0464 NC_011147.1 570579 571253 D similar to Salmonella typhi CT18 DedD protein; hypothetical protein 570579..571253 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141310.1 CDS SSPA0465 NC_011147.1 571564 572052 D membrane protein required for colicin V production; colicin V production protein 571564..572052 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141311.1 CDS SSPA0466 NC_011147.1 572090 573607 D Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 572090..573607 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141312.1 CDS SSPA0467 NC_011147.1 573643 575070 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(573643..575070) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141313.1 CDS SSPA0468 NC_011147.1 575281 576678 D similar to Salmonella typhi CT18 amino acid decarboxylase; amino acid decarboxylase 575281..576678 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141314.1 CDS SSPA0469 NC_011147.1 576769 578190 D similar to Salmonella typhi CT18 amino acid transporter; amino acid transporter 576769..578190 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141315.1 CDS SSPA0470 NC_011147.1 578192 579295 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 578192..579295 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141316.1 CDS SSPA0471 NC_011147.1 579359 580765 D similar to Salmonella typhi CT18 amino acid permease; amino acid permease 579359..580765 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141317.1 CDS SSPA0472 NC_011147.1 580792 581361 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 580792..581361 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141318.1 CDS SSPA0473 NC_011147.1 581650 582432 D similar to Salmonella typhi CT18 lysine-arginine-ornithine-binding periplasmic protein precursor; lysine-arginine-ornithine-binding periplasmic protein 581650..582432 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141319.1 CDS SSPA0474 NC_011147.1 582670 583452 D similar to Salmonella typhi CT18 histidine-binding periplasmic protein; histidine-binding periplasmic protein 582670..583452 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141320.1 CDS SSPA0475 NC_011147.1 583635 584321 D similar to Salmonella typhi CT18 histidine transport system permease protein; histidine transport system permease 583635..584321 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141321.1 CDS SSPA0476 NC_011147.1 584318 585025 D similar to Salmonella typhi CT18 histidine transport system permease; histidine transport system permease 584318..585025 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141322.1 CDS SSPA0477 NC_011147.1 585039 585812 D similar to Salmonella typhi CT18 histidine transport ATP-binding protein; histidine/lysine/arginine/ornithine transporter subunit 585039..585812 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141323.1 CDS SSPA0478 NC_011147.1 585864 586757 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(585864..586757) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141324.1 CDS SSPA0479 NC_011147.1 586883 587530 R similar to Salmonella typhi CT18 glutathione-S transferase; glutathione-S transferase complement(586883..587530) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141325.1 CDS SSPA0480 NC_011147.1 587673 588317 D similar to Salmonella typhi CT18 glutathione-S transferase; glutathione-S transferase 587673..588317 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141326.1 CDS SSPA0481 NC_011147.1 588373 588924 D similar to Salmonella typhi CT18 conserved hypothetical protein; phosphodiesterase 588373..588924 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141327.1 CDS SSPA0482 NC_011147.1 588981 589535 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 588981..589535 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141328.1 CDS SSPA0483 NC_011147.1 589541 590560 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(589541..590560) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141329.1 CDS SSPA0484 NC_011147.1 590813 591256 D similar to Salmonella typhi CT18 sugar phosphotransferase component II A; sugar phosphotransferase system subunit IIA 590813..591256 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141330.1 CDS SSPA0485 NC_011147.1 591337 591609 D similar to Salmonella typhi CT18 sugar phosphotransferase component II B; sugar phosphotransferase system subunit IIB 591337..591609 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141331.1 CDS ulaA NC_011147.1 591630 593021 D membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 591630..593021 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141332.1 CDS SSPA0487 NC_011147.1 593018 593848 D similar to Salmonella typhi CT18 transketolase N-terminal section; transketolase 593018..593848 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141333.1 CDS SSPA0488 NC_011147.1 593841 594794 D similar to Salmonella typhi CT18 transketolase C-terminal section; transketolase 593841..594794 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141334.1 CDS SSPA0489 NC_011147.1 594843 596363 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(594843..596363) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141335.1 CDS SSPA0490 NC_011147.1 596581 598725 R catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase complement(596581..598725) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141336.2 CDS SSPA0491 NC_011147.1 598802 600004 R similar to Salmonella typhi CT18 acetate kinase; acetate kinase complement(598802..600004) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141337.1 CDS SSPA0492 NC_011147.1 600344 600799 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 600344..600799 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141338.1 CDS SSPA0493 NC_011147.1 600882 601376 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 600882..601376 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141339.1 CDS SSPA0494 NC_011147.1 601369 602046 D similar to Salmonella typhi CT18 phosphatase; phosphatase 601369..602046 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141340.1 CDS SSPA0495 NC_011147.1 602122 603948 D similar to Salmonella typhi CT18 sodium/sulphate transporter; sodium/sulfate transporter 602122..603948 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141341.1 CDS SSPA0496 NC_011147.1 604054 604653 R similar to Salmonella typhi CT18 oxetanocin A biosynthetic enzyme; hypothetical protein complement(604054..604653) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141342.1 CDS SSPA0497 NC_011147.1 604747 605961 R 'broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor'; aminotransferase AlaT complement(604747..605961) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141343.1 CDS SSPA0498 NC_011147.1 606893 607828 D similar to Salmonella typhi CT18 NADH dehydrogenase operon transcriptional regulator; NADH dehydrogenase operon transcriptional regulator 606893..607828 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141344.1 CDS SSPA0499 NC_011147.1 607908 608060 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 607908..608060 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141345.1 CDS SSPA0500 NC_011147.1 608455 608898 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 608455..608898 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141346.1 CDS SSPA0501 NC_011147.1 608914 609576 D The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 608914..609576 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141347.1 CDS SSPA0502 NC_011147.1 609663 611465 D 'NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms'; NADH:ubiquinone oxidoreductase subunit C/D 609663..611465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141348.1 CDS SSPA0503 NC_011147.1 611468 611968 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 611468..611968 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141349.1 CDS SSPA0504 NC_011147.1 611965 613302 D 'shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase'; NADH dehydrogenase I subunit F 611965..613302 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141350.1 CDS SSPA0505 NC_011147.1 613327 616059 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 613327..616059 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141351.1 CDS SSPA0506 NC_011147.1 616056 617033 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 616056..617033 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141352.1 CDS SSPA0507 NC_011147.1 617048 617590 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 617048..617590 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141353.1 CDS SSPA0508 NC_011147.1 617601 618155 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 617601..618155 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141354.1 CDS SSPA0509 NC_011147.1 618152 618454 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 618152..618454 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141355.1 CDS SSPA0510 NC_011147.1 618451 620292 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 618451..620292 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141356.1 CDS SSPA0511 NC_011147.1 620544 622073 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 620544..622073 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141357.2 CDS SSPA0512 NC_011147.1 622080 623537 D Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 622080..623537 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141358.1 CDS SSPA0513 NC_011147.1 623678 624682 R similar to Salmonella typhi CT18 receptor/regulator protein; receptor/regulator protein complement(623678..624682) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141359.1 CDS SSPA0514 NC_011147.1 624748 625665 R member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; ribonuclease Z complement(624748..625665) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141360.1 CDS SSPA0515 NC_011147.1 625726 626187 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 625726..626187 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141361.1 CDS SSPA0516 NC_011147.1 626236 626547 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 626236..626547 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141362.1 CDS SSPA0517 NC_011147.1 626648 627943 D similar to Salmonella typhi CT18 isochorismate synthase; isochorismate synthase 626648..627943 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141363.1 CDS SSPA0518 NC_011147.1 628029 629699 D SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 628029..629699 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141364.1 CDS SSPA0519 NC_011147.1 629696 630454 D catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 629696..630454 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141365.1 CDS SSPA0520 NC_011147.1 630469 631326 D 'catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA'; naphthoate synthase 630469..631326 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141366.1 CDS SSPA0521 NC_011147.1 631326 632288 D 'catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate'; O-succinylbenzoate synthase 631326..632288 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141367.1 CDS SSPA0522 NC_011147.1 632285 633652 D similar to Salmonella typhi CT18 O-succinylbenzoic acid-CoA ligase; O-succinylbenzoic acid--CoA ligase 632285..633652 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141368.1 CDS SSPA0523 NC_011147.1 633750 634007 D similar to Salmonella typhi CT18 polymyxin B resistance protein; polymyxin B resistance protein 633750..634007 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141369.1 CDS SSPA0524 NC_011147.1 634002 634379 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(634002..634379) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141370.2 CDS SSPA0525 NC_011147.1 634379 634714 R hypothetical protein complement(634379..634714) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141371.1 CDS arnT NC_011147.1 634711 636357 R catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase complement(634711..636357) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141372.1 CDS SSPA0527 NC_011147.1 636354 637253 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(636354..637253) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141373.1 CDS SSPA0528 NC_011147.1 637250 639232 R Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase complement(637250..639232) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141374.1 CDS SSPA0529 NC_011147.1 639229 640212 R catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase complement(639229..640212) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141375.1 CDS SSPA0530 NC_011147.1 640215 641372 R catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase complement(640215..641372) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141376.1 CDS SSPA0531 NC_011147.1 641653 642258 D similar to Salmonella typhi CT18 Ais protein; Ais protein 641653..642258 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141377.1 CDS SSPA0532 NC_011147.1 642303 642728 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(642303..642728) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141378.1 CDS SSPA0533 NC_011147.1 642902 643549 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 642902..643549 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141379.1 CDS SSPA0534 NC_011147.1 643664 644860 D similar to Salmonella typhi CT18 conserved hypothetical protein; competence damage-inducible protein A 643664..644860 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141380.1 CDS SSPA0535 NC_011147.1 645110 645892 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 645110..645892 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141381.1 CDS SSPA0536 NC_011147.1 645894 647111 D similar to Salmonella typhi CT18 MR-MLE-family protein; MR-MLE-family protein 645894..647111 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141382.1 CDS SSPA0537 NC_011147.1 647167 648456 D similar to Salmonella typhi CT18 transport protein; transporter 647167..648456 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141383.1 CDS SSPA0538 NC_011147.1 648482 649285 D 'similar to Salmonella typhi CT18 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase'; aldolase 648482..649285 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141384.1 CDS SSPA0541 NC_011147.1 649554 650507 R 'similar to ElaD; specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins; SseL in Salmonella is required for macrophage killing and virulence, and it is secreted by the salmonella pathogenicity island 2 type III secretion system'; deubiquitinase complement(649554..650507) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141385.1 CDS SSPA0542 NC_011147.1 650497 650700 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(650497..650700) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141386.1 CDS glpC NC_011147.1 651002 652192 R anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C complement(651002..652192) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141387.1 CDS SSPA0544 NC_011147.1 652189 653448 R sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B complement(652189..653448) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141388.1 CDS glpA NC_011147.1 653438 655066 R 'anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor'; sn-glycerol-3-phosphate dehydrogenase subunit A complement(653438..655066) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141389.1 CDS glpT NC_011147.1 655339 656697 D catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 655339..656697 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141390.1 CDS glpQ NC_011147.1 656702 657772 D hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 656702..657772 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141391.1 CDS SSPA0548 NC_011147.1 657888 658766 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(657888..658766) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141392.1 CDS SSPA0549 NC_011147.1 658928 660118 D similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 658928..660118 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141393.1 CDS SSPA0550 NC_011147.1 660120 660374 R 'plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases'; 2Fe-2S ferredoxin complement(660120..660374) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141394.1 CDS nrdB NC_011147.1 660374 661504 R B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta complement(660374..661504) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141395.1 CDS SSPA0552 NC_011147.1 661617 663902 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(661617..663902) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141396.1 CDS SSPA0553 NC_011147.1 664258 664986 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(664258..664986) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141397.1 CDS SSPA0554 NC_011147.1 665069 665764 R similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein complement(665069..665764) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141398.1 CDS SSPA0555 NC_011147.1 666003 667328 D similar to |17548403|ref|NP_521743.1| PROBABLE TRANSPORTER TRANSMEMBRANE PROTEIN [Ralstonia solanacearum GMI1000]; hypothetical protein 666003..667328 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141399.1 CDS SSPA0556 NC_011147.1 667343 668545 D similar to Salmonella typhi CT18 MR-MLE-family protein; MR-MLE-family protein 667343..668545 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141400.1 CDS SSPA0557 NC_011147.1 668955 671591 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 668955..671591 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141401.1 CDS SSPA0558 NC_011147.1 671709 674555 D similar to Salmonella typhi CT18 sensor protein RcsC; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 671709..674555 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141402.1 CDS SSPA0559 NC_011147.1 674658 675308 R two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB complement(674658..675308) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141403.1 CDS SSPA0560 NC_011147.1 675325 677994 R similar to Salmonella typhi CT18 two-component system sensor kinase; phosphotransfer intermediate protein in two-component regulatory system with RcsBC complement(675325..677994) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141404.2 CDS SSPA0561 NC_011147.1 678723 679859 D similar to Salmonella typhi CT18 outer membrane protein C; outer membrane protein C 678723..679859 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141405.1 CDS SSPA0562 NC_011147.1 679974 681026 D catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 679974..681026 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141406.1 CDS SSPA0563 NC_011147.1 681107 682168 D similar to Salmonella typhi CT18 ADA regulatory protein; ADA regulatory protein 681107..682168 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141407.1 CDS SSPA0564 NC_011147.1 682171 682821 D similar to Salmonella typhi CT18 AlkB protein; AlkB protein 682171..682821 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141408.1 CDS SSPA0565 NC_011147.1 682897 684540 D efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane protein/ATP-binding protein 682897..684540 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141409.1 CDS SSPA0566 NC_011147.1 684749 685243 R 'serine protease inhibitor, inhibits trypsin and other proteases'; ecotin complement(684749..685243) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141410.1 CDS SSPA0567 NC_011147.1 685657 686148 D Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.; ferredoxin-type protein 685657..686148 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141411.1 CDS SSPA0568 NC_011147.1 686138 686401 D similar to Salmonella typhi Ty2 napAB assembly protein; assembly protein for periplasmic nitrate reductase 686138..686401 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141412.1 CDS SSPA0569 NC_011147.1 686398 688884 D periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 686398..688884 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141413.1 CDS napG NC_011147.1 688891 689586 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic protein 688891..689586 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141414.1 CDS napH NC_011147.1 689573 690442 D part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane protein 689573..690442 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141415.1 CDS napB NC_011147.1 690558 691007 D small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit 690558..691007 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141416.1 CDS SSPA0573 NC_011147.1 691017 691619 D with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC 691017..691619 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141417.1 CDS SSPA0574 NC_011147.1 691640 692257 D ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 691640..692257 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141418.1 CDS SSPA0575 NC_011147.1 692965 693702 D similar to Salmonella typhi Ty2 heme exporter protein C1; heme exporter protein C1 692965..693702 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141419.1 CDS ccmD1 NC_011147.1 693699 693911 D heme exporter protein D1 693699..693911 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141420.1 CDS SSPA0577 NC_011147.1 693908 694387 D CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 693908..694387 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141421.1 CDS SSPA0578 NC_011147.1 694384 696315 D similar to Salmonella typhi Ty2 cytochrome c-type biogenesis protein F1; cytochrome c-type biogenesis protein F1 694384..696315 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141422.1 CDS dsbE1 NC_011147.1 696312 696869 D thiol:disulfide interchange protein 696312..696869 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141423.1 CDS SSPA0580 NC_011147.1 697858 698505 R nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; transcriptional regulator NarP complement(697858..698505) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141424.2 CDS SSPA0581 NC_011147.1 699211 699798 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 699211..699798 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141425.1 CDS SSPA0582 NC_011147.1 699991 700194 R similar to Salmonella typhi CT18 homolog of virulence protein msgA; virulence protein MsgA-like protein complement(699991..700194) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141426.1 CDS SSPA0583 NC_011147.1 700386 702146 R similar to Salmonella typhi CT18 sulphatase; sulfatase complement(700386..702146) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141427.1 CDS SSPA0584 NC_011147.1 702178 702405 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(702178..702405) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141428.1 CDS SSPA0585 NC_011147.1 702585 703592 D similar to Salmonella typhi CT18 nucleoid-asociated protein; nucleoid-associated protein NdpA 702585..703592 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141429.1 CDS SSPA0586 NC_011147.1 703620 704240 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 703620..704240 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141430.1 CDS SSPA0587 NC_011147.1 704349 704633 R 'the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response'; 50S ribosomal protein L25 complement(704349..704633) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141431.1 CDS SSPA0588 NC_011147.1 704758 706518 R similar to Salmonella typhi CT18 helicase; helicase complement(704758..706518) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141432.1 CDS SSPA0589 NC_011147.1 706670 707365 D catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 706670..707365 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141433.1 CDS SSPA0590 NC_011147.1 707393 708583 D Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system protein 707393..708583 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141434.1 CDS SSPA0591 NC_011147.1 708580 708678 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 708580..708678 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141435.1 CDS SSPA0592 NC_011147.1 708974 709318 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 708974..709318 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141436.1 CDS SSPA0593 NC_011147.1 709322 710911 R similar to Salmonella typhi CT18 ABC-transporter ATP-binding protein; ABC transporter ATP-binding protein complement(709322..710911) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141437.1 CDS SSPA0594 NC_011147.1 710913 711938 R similar to Salmonella typhi CT18 binding-protein-dependent transporter; binding-protein-dependent transporter complement(710913..711938) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141438.1 CDS SSPA0595 NC_011147.1 711938 713032 R similar to Salmonella typhi CT18 binding-protein-dependent transporter; binding-protein-dependent transporter complement(711938..713032) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141439.2 CDS SSPA0596 NC_011147.1 713042 714847 R similar to Salmonella typhi CT18 transport system periplasmic binding protein; transport system periplasmic binding protein complement(713042..714847) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141440.1 CDS SSPA0597 NC_011147.1 714954 716510 R similar to Salmonella typhi CT18 rtn protein; hypothetical protein complement(714954..716510) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141441.1 CDS spr NC_011147.1 716836 717408 R 'by similarity, Spr seems to have peptidase activity; involved in thermoresistance'; outer membrane lipoprotein complement(716836..717408) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141442.1 CDS SSPA0599 NC_011147.1 717822 718535 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(717822..718535) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141443.1 CDS SSPA0600 NC_011147.1 718571 719557 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(718571..719557) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141444.2 CDS SSPA0601 NC_011147.1 719769 720341 R 'Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein'; elongation factor P complement(719769..720341) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141445.1 CDS SSPA0602 NC_011147.1 720476 720853 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(720476..720853) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141446.1 CDS SSPA0603 NC_011147.1 721459 721581 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 721459..721581 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141447.1 CDS SSPA0604 NC_011147.1 721583 722248 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 721583..722248 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141448.1 CDS SSPA0605 NC_011147.1 722313 723494 R similar to Salmonella typhi Ty2 sugar efflux transporter; sugar efflux transporter complement(722313..723494) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141449.1 CDS SSPA0606 NC_011147.1 723863 724993 D 'phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr'; PTS system fructose-specific transporter subunit IIA/HPr protein 723863..724993 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141450.2 CDS fruK NC_011147.1 724993 725931 D 'converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers'; 1-phosphofructokinase 724993..725931 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141451.1 CDS SSPA0608 NC_011147.1 725948 727636 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 725948..727636 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141452.1 CDS SSPA0609 NC_011147.1 727691 728548 R Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV complement(727691..728548) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141453.1 CDS SSPA0610 NC_011147.1 728627 729676 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(728627..729676) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141454.1 CDS SSPA0611 NC_011147.1 729797 730660 D similar to Salmonella typhi CT18 transcriptional regulator; DNA-binding transcriptional regulator 729797..730660 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141455.1 CDS SSPA0612 NC_011147.1 730850 732319 D similar to Salmonella typhi CT18 lysine-specific permease; lysine transporter 730850..732319 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141456.1 CDS SSPA0613 NC_011147.1 732664 734655 D 'Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein'; colicin I receptor 732664..734655 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141457.1 CDS SSPA0614 NC_011147.1 734699 736021 R similar to |16124132|ref|NP_407445.1| regulatory protein [Yersinia pestis]; hypothetical protein complement(734699..736021) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141458.1 CDS SSPA0615 NC_011147.1 736054 736941 R similar to Salmonella typhi CT18 hydrolase; hydrolase complement(736054..736941) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141459.1 CDS SSPA0616 NC_011147.1 738530 738919 D similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 738530..738919 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141460.1 CDS SSPA0617 NC_011147.1 738908 739765 R similar to Salmonella typhi CT18 esterase; esterase complement(738908..739765) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141461.1 CDS folE NC_011147.1 740095 740763 D 'involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer'; GTP cyclohydrolase I 740095..740763 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141462.1 CDS SSPA0619 NC_011147.1 740778 741920 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 740778..741920 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141463.1 CDS SSPA0620 NC_011147.1 742070 743092 D negative regulator of the mglBAC operon for galactose utilization; DNA-binding transcriptional regulator GalS 742070..743092 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141464.1 CDS SSPA0621 NC_011147.1 743591 744589 D similar to Salmonella typhi CT18 D-galactose-binding periplasmic protein precursor; D-galactose-binding periplasmic protein 743591..744589 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141465.1 CDS mglC NC_011147.1 746259 747269 D ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane protein 746259..747269 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141466.1 CDS SSPA0623 NC_011147.1 747344 748579 R 'catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines'; dihydropyrimidine dehydrogenase complement(747344..748579) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141467.1 CDS SSPA0624 NC_011147.1 748573 749814 R function undetermined; similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain; oxidoreductase complement(748573..749814) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141468.1 CDS SSPA0625 NC_011147.1 750019 750264 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(750019..750264) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141469.1 CDS SSPA0626 NC_011147.1 750261 750980 R similar to Salmonella typhi CT18 vancomycin resistance protein; hypothetical protein complement(750261..750980) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141470.1 CDS SSPA0627 NC_011147.1 751157 752041 R Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase complement(751157..752041) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141471.1 CDS SSPA0628 NC_011147.1 752195 752890 R similar to Salmonella typhi CT18 puatative membrane protein; hypothetical protein complement(752195..752890) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141472.1 CDS SSPA0629 NC_011147.1 752887 753285 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(752887..753285) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141473.1 CDS SSPA0630 NC_011147.1 753417 754325 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(753417..754325) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141474.1 CDS SSPA0631 NC_011147.1 754451 755809 D similar to Salmonella typhi CT18 n-hydroxybenzoate transporter; n-hydroxybenzoate transporter 754451..755809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141475.1 CDS SSPA0632 NC_011147.1 755821 756858 D 'similar to Salmonella typhi CT18 gentisate 1,2-dioxygenase'; gentisate 1,2-dioxygenase 755821..756858 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141476.1 CDS SSPA0633 NC_011147.1 756874 757575 D similar to Salmonella typhi CT18 FAA-hydrolase-family protein; FAA-hydrolase-family protein 756874..757575 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141477.1 CDS SSPA0634 NC_011147.1 757584 758228 D similar to Salmonella typhi CT18 glutathione-S-transferase-family protein; glutathione-S-transferase-family protein 757584..758228 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141478.1 CDS SSPA0635 NC_011147.1 758243 759436 D catalyzes the formation of catechol from salicylate; salicylate hydroxylase 758243..759436 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141479.1 CDS SSPA0636 NC_011147.1 759545 760483 D similar to Salmonella typhi CT18 conserved hypothetical protein; tRNA-dihydrouridine synthase C 759545..760483 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141480.1 CDS SSPA0637 NC_011147.1 760554 760751 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(760554..760751) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141481.1 CDS SSPA0638 NC_011147.1 760943 762379 D 'may be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride'; multidrug resistance outer membrane protein MdtQ 760943..762379 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141482.1 CDS SSPA0639 NC_011147.1 762445 763206 D similar to Salmonella typhi CT18 oxidoreductase; acetoin dehydrogenase 762445..763206 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141483.1 CDS SSPA0640 NC_011147.1 763255 763851 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(763255..763851) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141484.1 CDS SSPA0641 NC_011147.1 763983 764570 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 763983..764570 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141485.1 CDS pbpG NC_011147.1 764775 765683 D specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 764775..765683 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141486.1 CDS SSPA0643 NC_011147.1 765742 767472 R 'component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent'; D-lactate dehydrogenase complement(765742..767472) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141487.1 CDS SSPA0644 NC_011147.1 767739 770045 D similar to Salmonella typhi CT18 periplasmic beta-glucosidase precursor; beta-glucosidase 767739..770045 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141488.1 CDS SSPA0645 NC_011147.1 770226 771143 D similar to Salmonella typhi CT18 periplasmic protein; hypothetical protein 770226..771143 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141489.1 CDS SSPA0646 NC_011147.1 771147 772316 D similar to Salmonella typhi CT18 permease transmembrane component; permease 771147..772316 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141490.1 CDS SSPA0647 NC_011147.1 772309 773256 D similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 772309..773256 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141491.1 CDS SSPA0648 NC_011147.1 773240 773971 D similar to Salmonella typhi CT18 permease transmembrane component; permease 773240..773971 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141492.1 CDS SSPA0649 NC_011147.1 773952 774059 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(773952..774059) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141493.1 CDS SSPA0650 NC_011147.1 774119 774850 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(774119..774850) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141494.1 CDS SSPA0651 NC_011147.1 775073 776758 D similar to Salmonella typhi CT18 two-component system sensor kinase; two-component system sensor kinase 775073..776758 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141495.1 CDS SSPA0652 NC_011147.1 776755 777474 D unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT 776755..777474 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141496.1 CDS SSPA0653 NC_011147.1 777521 777988 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 777521..777988 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141497.1 CDS SSPA0654 NC_011147.1 778045 778575 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(778045..778575) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141498.1 CDS SSPA0655 NC_011147.1 778747 779205 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(778747..779205) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141499.1 CDS metG NC_011147.1 779446 781479 R methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase complement(779446..781479) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141500.1 CDS SSPA0657 NC_011147.1 781644 782753 D similar to Salmonella typhi CT18 conserved hypothetical protein; ATPase 781644..782753 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141501.1 CDS SSPA0658 NC_011147.1 783031 783312 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 783031..783312 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141502.1 CDS SSPA0659 NC_011147.1 783591 784124 D similar to Salmonella typhi CT18 fimbrial subunit protein; fimbrial subunit protein 783591..784124 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141503.1 CDS SSPA0660 NC_011147.1 784186 784866 D similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 784186..784866 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141504.1 CDS SSPA0661 NC_011147.1 784895 787381 D similar to Salmonella typhi CT18 outer membrane usher protein; outer membrane usher protein 784895..787381 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141505.1 CDS SSPA0662 NC_011147.1 787397 788419 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 787397..788419 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141506.1 CDS SSPA0663 NC_011147.1 788463 788777 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(788463..788777) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141507.1 CDS SSPA0664 NC_011147.1 789187 789984 D catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 789187..789984 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141508.1 CDS SSPA0665 NC_011147.1 789971 790771 D catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 789971..790771 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141509.1 CDS SSPA0666 NC_011147.1 790807 791553 D similar to Salmonella typhi Ty2 GntR-family transcriptional regulator; GntR family transcriptional regulator 790807..791553 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141510.2 CDS SSPA0667 NC_011147.1 791527 792492 R similar to Salmonella typhi CT18 sugar kinase; sugar kinase complement(791527..792492) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141511.1 CDS SSPA0668 NC_011147.1 792489 793493 R similar to Salmonella typhi CT18 hydrolase; hydrolase complement(792489..793493) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141512.1 CDS SSPA0669 NC_011147.1 793490 794761 R similar to Salmonella typhi CT18 nucleoside permease; nucleoside permease complement(793490..794761) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141513.1 CDS SSPA0670 NC_011147.1 795015 796067 D 'catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate'; fructose-bisphosphate aldolase 795015..796067 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141514.1 CDS SSPA0671 NC_011147.1 796120 797019 R cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase complement(796120..797019) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141515.1 CDS SSPA0672 NC_011147.1 797584 797919 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 797584..797919 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141516.1 CDS SSPA0673 NC_011147.1 798041 798457 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 798041..798457 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141517.1 CDS SSPA0674 NC_011147.1 798416 798607 R hypothetical protein complement(798416..798607) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141518.1 CDS SSPA0675 NC_011147.1 799074 800435 R similar to Salmonella typhi CT18 protease; protease complement(799074..800435) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141519.1 CDS SSPA0676 NC_011147.1 800599 801216 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 800599..801216 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141520.1 CDS SSPA0677 NC_011147.1 801534 801632 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 801534..801632 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141521.1 CDS SSPA0678 NC_011147.1 801872 802291 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 801872..802291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141522.1 CDS SSPA0679 NC_011147.1 802728 803090 D similar to |2126036|pir||I69804 hypothetical protein rhsF [imported] - Escherichia coli (fragment); hypothetical protein 802728..803090 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141523.1 CDS SSPA0680 NC_011147.1 803100 803402 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 803100..803402 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141524.1 CDS SSPA0681 NC_011147.1 803532 804032 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 803532..804032 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141525.1 CDS SSPA0682 NC_011147.1 804160 804642 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 804160..804642 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141526.1 CDS SSPA0683 NC_011147.1 804860 805138 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 804860..805138 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141527.1 CDS SSPA0684 NC_011147.1 805207 805809 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 805207..805809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141528.1 CDS SSPA0685 NC_011147.1 805919 806398 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 805919..806398 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141529.1 CDS SSPA0686 NC_011147.1 806466 806930 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 806466..806930 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141530.1 CDS SSPA0687 NC_011147.1 807031 807474 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 807031..807474 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141531.1 CDS SSPA0688 NC_011147.1 807586 808314 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 807586..808314 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144948.1 CDS SSPA0689 NC_011147.1 808445 809128 R hypothetical protein complement(808445..809128) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141532.1 CDS SSPA0690 NC_011147.1 809168 811279 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(809168..811279) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141533.1 CDS SSPA0691 NC_011147.1 811290 811985 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(811290..811985) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141534.1 CDS SSPA0692 NC_011147.1 812007 812891 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(812007..812891) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141535.1 CDS SSPA0693 NC_011147.1 813478 814200 R 'response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport'; DNA-binding transcriptional regulator BaeR complement(813478..814200) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141536.1 CDS SSPA0694 NC_011147.1 814197 815600 R similar to Salmonella typhi CT18 two-component system sensor kinase; signal transduction histidine-protein kinase BaeS complement(814197..815600) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141537.1 CDS SSPA0695 NC_011147.1 815600 817012 R similar to Salmonella typhi CT18 transporter protein; multidrug efflux system protein MdtE complement(815600..817012) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141538.1 CDS SSPA0696 NC_011147.1 817009 820089 R 'Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate'; multidrug efflux system subunit MdtC complement(817009..820089) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_007443149.1 CDS SSPA0697 NC_011147.1 820090 823212 R multidrug efflux system subunit MdtB complement(820090..823212) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141540.1 CDS SSPA0698 NC_011147.1 824869 826221 R similar to Salmonella typhi CT18 conserved hypothetical protein; chaperone complement(824869..826221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141541.1 CDS SSPA0699 NC_011147.1 826355 827224 D 'inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine'; 3-methyladenine DNA glycosylase 826355..827224 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141542.1 CDS SSPA0700 NC_011147.1 827192 830182 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(827192..830182) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141543.1 CDS SSPA0701 NC_011147.1 830513 831154 D functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 830513..831154 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141544.1 CDS dcd NC_011147.1 831245 831826 D Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 831245..831826 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141545.1 CDS SSPA0703 NC_011147.1 831865 833721 D 'YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs'; assembly protein 831865..833721 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141546.1 CDS SSPA0704 NC_011147.1 833816 835375 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(833816..835375) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141547.2 CDS SSPA0705 NC_011147.1 836050 837189 D similar to Salmonella typhi CT18 polysaccharide export protein; polysaccharide export protein 836050..837189 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141548.1 CDS SSPA0706 NC_011147.1 837195 837644 D 'Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis'; tyrosine phosphatase 837195..837644 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141549.1 CDS SSPA0707 NC_011147.1 837641 839800 D Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); tyrosine kinase 837641..839800 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141550.1 CDS SSPA0709 NC_011147.1 840731 841219 D 'acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium'; colanic acid biosynthesis acetyltransferase WcaB 840731..841219 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141551.1 CDS SSPA0710 NC_011147.1 841216 842433 D similar to Salmonella typhi CT18 glycosyltransferase; glycosyl transferase family protein 841216..842433 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141552.1 CDS wcaD NC_011147.1 842408 843622 D essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance; colanic acid biosynthesis protein 842408..843622 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141553.1 CDS SSPA0712 NC_011147.1 843635 844381 D similar to Salmonella typhi CT18 glycosyltransferase; glycosyl transferase family protein 843635..844381 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141554.1 CDS SSPA0713 NC_011147.1 844397 844951 D acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); colanic acid biosynthesis acetyltransferase WcaF 844397..844951 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141555.1 CDS SSPA0714 NC_011147.1 844975 846096 D 'similar to Salmonella typhi CT18 GDP-mannose 4,6-dehydratase'; GDP-mannose 4,6-dehydratase 844975..846096 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141556.1 CDS SSPA0715 NC_011147.1 846099 847064 D similar to Salmonella typhi Ty2 GDP-fucose synthetase; GDP-fucose synthetase 846099..847064 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141557.1 CDS SSPA0716 NC_011147.1 847067 847540 D similar to Salmonella typhi CT18 O-antigen biosynthesis protein; O-antigen biosynthesis protein 847067..847540 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141558.1 CDS SSPA0717 NC_011147.1 847537 848760 D similar to Salmonella typhi CT18 glycosyltransferase; glycosyl transferase family protein 847537..848760 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141559.1 CDS SSPA0718 NC_011147.1 848757 850199 D similar to Salmonella typhi CT18 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 848757..850199 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141560.1 CDS SSPA0719 NC_011147.1 850310 851680 D similar to Salmonella typhi Ty2 phosphomannomutase; phosphomannomutase 850310..851680 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141561.1 CDS SSPA0720 NC_011147.1 853230 854708 D similar to Salmonella typhi CT18 transmembrane transport protein; colanic acid exporter 853230..854708 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141562.1 CDS SSPA0721 NC_011147.1 856007 857146 D similar to Salmonella typhimurium glycosyl transferase in colanic acid gene cluster; glycosyl transferase family protein 856007..857146 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141563.1 CDS wcaM NC_011147.1 857157 858560 D WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; colanic acid biosynthesis protein 857157..858560 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141564.1 CDS SSPA0723 NC_011147.1 860008 861093 D NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose; dTDP-glucose 4,6 dehydratase 860008..861093 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141565.1 CDS SSPA0724 NC_011147.1 861093 861992 D 'with dTDP-4-dehydrorhamnose 3,5-epimerase forms a complex known as dTDP-L-rhamnose synthetase; catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose'; dTDP-4-dehydrorhamnose reductase 861093..861992 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141566.1 CDS SSPA0725 NC_011147.1 862040 862918 D similar to Salmonella typhi CT18 TDP-glucose pyrophosphorylase; TDP-glucose pyrophosphorylase 862040..862918 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141567.1 CDS SSPA0726 NC_011147.1 862928 863470 D 'similar to Salmonella typhi CT18 dTDP-4-dehydrorhamnose 3,5-epimerase'; dTDP-4-dehydrorhamnose 3,5-epimerase 862928..863470 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141568.1 CDS SSPA0727 NC_011147.1 863476 864450 D 'catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose'; CDP-6-deoxy-delta-3,4-glucoseen reductase 863476..864450 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141569.1 CDS SSPA0728 NC_011147.1 864466 865239 D similar to Salmonella typhi CT18 glucose-1-phosphate cytidylyltransferase; glucose-1-phosphate cytidylyltransferase 864466..865239 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141570.1 CDS SSPA0729 NC_011147.1 865244 866323 D 'similar to Salmonella typhi CT18 CDP-glucose 4,6-dehydratase'; CDP-glucose 4,6-dehydratase 865244..866323 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141571.1 CDS SSPA0730 NC_011147.1 866350 867663 D similar to Salmonella typhi CT18 dehydratase RfbH; dehydratase RfbH 866350..867663 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141572.1 CDS SSPA0731 NC_011147.1 867699 868538 D similar to Salmonella typhi Ty2 paratose synthase; paratose synthase 867699..868538 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141574.1 CDS rfbX NC_011147.1 869621 870919 D O-antigen transporter 869621..870919 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141575.1 CDS SSPA0734 NC_011147.1 870921 871922 D similar to Salmonella typhi Ty2 glycosyl transferase; glycosyl transferase family protein 870921..871922 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141576.1 CDS SSPA0735 NC_011147.1 872497 873558 D similar to Salmonella typhi CT18 glycosyltransferase; glycosyltransferase 872497..873558 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141577.1 CDS SSPA0736 NC_011147.1 873559 874503 D similar to Salmonella typhi CT18 rhamnosyltransferase; rhamnosyltransferase 873559..874503 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141578.1 CDS SSPA0737 NC_011147.1 874504 875943 D similar to Salmonella typhi Ty2 mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 874504..875943 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141579.1 CDS SSPA0738 NC_011147.1 875930 877363 D similar to Salmonella typhi CT18 phosphomannomutase; phosphomannomutase 875930..877363 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141580.1 CDS SSPA0739 NC_011147.1 877435 878865 D similar to Salmonella typhi CT18 undecaprenyl-phosphate galactosephosphotransferase; undecaprenyl-phosphate galactosephosphotransferase 877435..878865 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141581.1 CDS SSPA0740 NC_011147.1 879029 880435 D catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 879029..880435 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141582.1 CDS SSPA0741 NC_011147.1 880672 881838 D similar to Salmonella typhi Ty2 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 880672..881838 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141583.1 CDS SSPA0742 NC_011147.1 881987 882964 D similar to Salmonella typhi Ty2 polysaccharide chain length regulator; polysaccharide chain length regulator 881987..882964 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141584.1 CDS SSPA0743 NC_011147.1 883045 883656 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase complement(883045..883656) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141585.1 CDS SSPA0744 NC_011147.1 883650 884426 R 'catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase'; imidazole glycerol phosphate synthase subunit HisF complement(883650..884426) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141586.1 CDS SSPA0745 NC_011147.1 884408 885145 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(884408..885145) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141587.1 CDS hisH NC_011147.1 885145 885735 R 'with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide'; imidazole glycerol phosphate synthase subunit HisH complement(885145..885735) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141588.1 CDS SSPA0747 NC_011147.1 885735 886802 R catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase complement(885735..886802) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141589.1 CDS SSPA0748 NC_011147.1 886799 887878 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(886799..887878) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141590.1 CDS hisD NC_011147.1 887875 889179 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(887875..889179) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141591.1 CDS hisG NC_011147.1 889282 890181 R long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase complement(889282..890181) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141592.1 CDS SSPA0751 NC_011147.1 890540 891364 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 890540..891364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141593.1 CDS SSPA0752 NC_011147.1 891410 892324 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 891410..892324 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141594.1 CDS SSPA0753 NC_011147.1 892604 893968 D similar to Salmonella typhi CT18 amino acid transporter protein; amino acid transporter protein 892604..893968 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141595.1 CDS sbcB NC_011147.1 894104 895534 R Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I complement(894104..895534) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141596.1 CDS SSPA0755 NC_011147.1 901153 901731 D similar to Salmonella typhi CT18 thiosulfate reductase electron transport protein PhsB; thiosulfate reductase electron transport protein PhsB 901153..901731 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141597.1 CDS SSPA0756 NC_011147.1 901728 902492 D similar to Salmonella typhi CT18 thiosulfate reductase cytochrome b subunit; thiosulfate reductase cytochrome b subunit 901728..902492 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141598.1 CDS SSPA0757 NC_011147.1 903938 904405 D similar to Salmonella typhi CT18 DNA gyrase inhibitory protein; DNA gyrase inhibitor 903938..904405 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141599.1 CDS SSPA0758 NC_011147.1 904524 905582 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 904524..905582 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141600.1 CDS SSPA0759 NC_011147.1 905827 906162 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 905827..906162 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141601.1 CDS SSPA0760 NC_011147.1 906196 907098 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(906196..907098) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141602.1 CDS SSPA0761 NC_011147.1 907156 908370 R 'involved in coenzyme B(12)-dependent 1, 2-propanediol degradation; important for the synthesis of propionyl coenzyme A during growth on 1,2-propanediol'; propionate kinase complement(907156..908370) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141603.1 CDS SSPA0762 NC_011147.1 908355 908807 R similar to Salmonella typhi CT18 propanediol utilization protein PduV; propanediol utilization protein PduV complement(908355..908807) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141604.1 CDS SSPA0763 NC_011147.1 908812 909162 R similar to Salmonella typhi CT18 propanediol utilization protein PduU; propanediol utilization protein PduU complement(908812..909162) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141605.1 CDS SSPA0764 NC_011147.1 909162 909716 R similar to Salmonella typhi CT18 propanediol utilization protein PduT; propanediol utilization protein PduT complement(909162..909716) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141606.1 CDS SSPA0765 NC_011147.1 909719 911047 R similar to Salmonella typhi CT18 ferredoxin; ferredoxin complement(909719..911047) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141607.1 CDS SSPA0766 NC_011147.1 911071 912183 R similar to Salmonella typhi CT18 propanol dehydrogenase; propanol dehydrogenase complement(911071..912183) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141608.1 CDS SSPA0767 NC_011147.1 912195 913589 R similar to Salmonella typhi CT18 CoA-dependent proprionaldehyde dehydrogenase; CoA-dependent proprionaldehyde dehydrogenase complement(912195..913589) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141609.1 CDS SSPA0768 NC_011147.1 913586 914596 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(913586..914596) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141610.1 CDS SSPA0769 NC_011147.1 914606 914881 R similar to Salmonella typhimurium Propanediol utilization: polyhedral bodies; propanediol utilization polyhedral bodies protein complement(914606..914881) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141611.1 CDS SSPA0770 NC_011147.1 914885 915376 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(914885..915376) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141612.1 CDS SSPA0771 NC_011147.1 915373 916005 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(915373..916005) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141613.1 CDS SSPA0772 NC_011147.1 916005 916487 R similar to Salmonella typhi CT18 propanediol utilization protein PduK; propanediol utilization protein PduK complement(916005..916487) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141614.1 CDS SSPA0773 NC_011147.1 916491 916766 R similar to Salmonella typhi CT18 propanediol utilization protein PduJ; propanediol utilization protein PduJ complement(916491..916766) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141615.1 CDS SSPA0774 NC_011147.1 916785 917135 R similar to Salmonella typhi CT18 PduH protein; PduH protein complement(916785..917135) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141616.1 CDS SSPA0776 NC_011147.1 918993 919514 R similar to Salmonella typhi CT18 diol dehydratase small subunit; diol dehydratase small subunit complement(918993..919514) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141617.1 CDS SSPA0777 NC_011147.1 919529 920203 R similar to Salmonella typhi CT18 diol dehydratase medium subunit; diol dehydratase medium subunit complement(919529..920203) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141618.1 CDS SSPA0778 NC_011147.1 920214 921878 R similar to Salmonella typhi CT18 glycerol dehydratase large subunit; glycerol dehydratase large subunit complement(920214..921878) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141619.1 CDS SSPA0779 NC_011147.1 921897 922598 R similar to Salmonella typhi Ty2 propanediol utilization protein PduB; propanediol utilization protein PduB complement(921897..922598) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141620.1 CDS SSPA0780 NC_011147.1 922706 922990 R similar to Salmonella typhi CT18 propanediol utilization protein PduA; propanediol utilization protein PduA complement(922706..922990) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141621.1 CDS pduF NC_011147.1 923227 924189 D propanediol diffusion facilitator 923227..924189 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141622.1 CDS SSPA0781 NC_011147.1 924491 925438 D similar to Salmonella typhi CT18 pdu/cob regulatory protein PocR; pdu/cob regulatory protein PocR 924491..925438 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144949.1 CDS cbiA NC_011147.1 926036 927415 D cobyrinic acid a,c-diamide synthase 926036..927415 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141623.1 CDS cbiB NC_011147.1 927412 928371 D CobD; CbiB in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 927412..928371 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141624.1 CDS cbiC NC_011147.1 928382 929014 D catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin; cobalt-precorrin-8X methylmutase 928382..929014 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141625.1 CDS cbiD NC_011147.1 929014 930153 D Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A; cobalt-precorrin-6A synthase 929014..930153 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141626.1 CDS SSPA0785 NC_011147.1 930147 930752 D catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a; cobalt-precorrin-6Y C(5)-methyltransferase 930147..930752 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141627.1 CDS SSPA0786 NC_011147.1 930742 931320 D catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating; cobalt-precorrin-6Y C(15)-methyltransferase 930742..931320 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141628.1 CDS SSPA0787 NC_011147.1 931304 932077 D similar to Salmonella typhi CT18 precorrin-4 C11-methyltransferase; precorrin-4 C(11)-methyltransferase 931304..932077 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141629.1 CDS SSPA0788 NC_011147.1 932058 933113 D catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3; cobalamin biosynthesis protein CbiG 932058..933113 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141630.1 CDS SSPA0789 NC_011147.1 933113 933838 D similar to Salmonella typhi CT18 precorrin-3 C17-methyltransferase; precorrin-3 C17-methyltransferase 933113..933838 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141631.1 CDS SSPA0790 NC_011147.1 933835 934626 D 'CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cobalt ion in order for ring contraction to occur; CobK thus converts precorrin 6 into dihydro-precorrin 6 while CbiJ converts cobalt-precorrin 6 into cobalt-deihydro-precorrin 6'; cobalt-precorrin-6x reductase 933835..934626 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141632.1 CDS SSPA0791 NC_011147.1 934629 935420 D similar to Salmonella typhimurium synthesis of vitamin B12 adenosyl cobalamide precursor; vitamin B12 adenosyl cobalamide biosynthesis protein 934629..935420 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141633.2 CDS SSPA0792 NC_011147.1 935417 936130 D catalyzes the formation of precorrin-3A from precorrin-2; cobalt-precorrin-2 C(20)-methyltransferase 935417..936130 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141634.1 CDS SSPA0793 NC_011147.1 936127 936864 D catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 936127..936864 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141635.1 CDS SSPA0794 NC_011147.1 936866 937147 D periplasmic cobalt binding component of the cobalt transport system; cobalt transport protein CbiN 936866..937147 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141636.1 CDS SSPA0795 NC_011147.1 937134 937811 D similar to Salmonella typhi Ty2 cobalt transport protein CbiQ; cobalt transport protein CbiQ 937134..937811 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141637.1 CDS cbiO NC_011147.1 937820 938635 D with CbiNQ forms the ABC transporter for cobalt import; cobalt transporter ATP-binding subunit 937820..938635 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141638.1 CDS SSPA0797 NC_011147.1 938632 940152 D 'catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation'; cobyric acid synthase 938632..940152 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141639.1 CDS cobU NC_011147.1 940149 940694 D catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 940149..940694 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141640.1 CDS cobS NC_011147.1 940691 941434 D catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 940691..941434 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141641.1 CDS cobT NC_011147.1 941461 942531 D 'catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole'; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 941461..942531 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141642.1 CDS SSPA0801 NC_011147.1 942609 943538 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 942609..943538 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141643.1 CDS SSPA0802 NC_011147.1 943589 943759 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 943589..943759 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141644.1 CDS SSPA0802a NC_011147.1 943999 945456 D 1 bp insertion in Paratyphi A strain ATCC9150 causes frameshift in SPA0859; hypothetical protein 943999..945456 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141645.1 CDS SSPA0803 NC_011147.1 945677 945835 R hypothetical protein complement(945677..945835) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141646.1 CDS SSPA0804 NC_011147.1 946170 946556 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 946170..946556 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141647.1 CDS SSPA0805 NC_011147.1 946550 946876 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 946550..946876 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141648.1 CDS SSPA0806 NC_011147.1 946865 947026 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(946865..947026) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141649.1 CDS SSPA0807 NC_011147.1 947072 948526 D Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 947072..948526 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141650.1 CDS SSPA0808 NC_011147.1 949226 949399 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 949226..949399 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141651.1 CDS SSPA0809 NC_011147.1 949402 949578 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 949402..949578 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141652.1 CDS SSPA0810 NC_011147.1 949828 950625 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(949828..950625) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141653.1 CDS SSPA0811 NC_011147.1 951106 951267 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 951106..951267 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141654.1 CDS SSPA0812 NC_011147.1 951394 951813 D binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; DNA polymerase V subunit UmuD 951394..951813 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141655.1 CDS umuC NC_011147.1 951816 953084 D binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; DNA polymerase V subunit UmuC 951816..953084 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141656.1 CDS SSPA0814 NC_011147.1 953530 953742 D similar to Salmonella typhi CT18 cold shock protein; cold shock protein 953530..953742 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141657.1 CDS SSPA0816 NC_011147.1 954202 955380 R similar to Salmonella typhi Ty2 outer membrane protein S1; outer membrane protein S1 complement(954202..955380) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141658.1 CDS SSPA0817 NC_011147.1 956421 957116 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 956421..957116 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141659.1 CDS SSPA0818 NC_011147.1 957190 958620 D similar to Salmonella typhi CT18 DNA-cytosine methyltransferase; DNA cytosine methylase 957190..958620 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141660.1 CDS SSPA0819 NC_011147.1 958601 959071 D similar to Salmonella typhi CT18 patch repair protein; patch repair protein 958601..959071 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141661.1 CDS SSPA0820 NC_011147.1 959060 959980 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(959060..959980) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141662.1 CDS SSPA0821 NC_011147.1 960156 961067 D similar to Salmonella typhimurium inner membrane protein; hypothetical protein 960156..961067 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141663.1 CDS SSPA0822 NC_011147.1 961084 961329 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 961084..961329 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141664.1 CDS SSPA0823 NC_011147.1 961494 963206 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 961494..963206 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141665.1 CDS SSPA0824 NC_011147.1 963185 964000 R catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; mannosyl-3-phosphoglycerate phosphatase complement(963185..964000) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141666.1 CDS SSPA0825 NC_011147.1 964310 964537 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(964310..964537) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141667.1 CDS SSPA0826 NC_011147.1 964663 964860 D similar to Salmonella typhi Ty2 DsrB protein; hypothetical protein 964663..964860 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141668.1 CDS SSPA0827 NC_011147.1 964899 965522 R similar to Salmonella typhi CT18 colanic acid capsullar biosynthesis activation protein A; colanic acid capsullar biosynthesis activation protein A complement(964899..965522) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141669.1 CDS fliR NC_011147.1 965804 966598 R 'FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus'; flagellar biosynthesis protein FliR complement(965804..966598) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141670.1 CDS fliQ NC_011147.1 966607 966876 R with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ complement(966607..966876) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141671.1 CDS fliP NC_011147.1 966886 967623 R 'FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus'; flagellar biosynthesis protein FliP complement(966886..967623) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141672.1 CDS SSPA0831 NC_011147.1 967623 968000 R 'with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus'; flagellar biosynthesis protein FliO complement(967623..968000) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141673.1 CDS fliN NC_011147.1 968000 968413 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN complement(968000..968413) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141674.1 CDS fliM NC_011147.1 968410 969414 R with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM complement(968410..969414) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141675.1 CDS fliL NC_011147.1 969419 969886 R interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL complement(969419..969886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141676.1 CDS SSPA0835 NC_011147.1 969991 971214 R similar to Salmonella typhi CT18 flagellar hook-length control protein; flagellar hook-length control protein complement(969991..971214) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141677.1 CDS fliJ NC_011147.1 971211 971654 R rod/hook and filament chaperone; flagellar biosynthesis chaperone complement(971211..971654) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141678.1 CDS fliI NC_011147.1 971676 973046 R involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase complement(971676..973046) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141679.1 CDS fliH NC_011147.1 973046 973753 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(973046..973753) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141680.1 CDS fliG NC_011147.1 973746 974741 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(973746..974741) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141681.1 CDS fliF NC_011147.1 974734 976425 R 'the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod'; flagellar MS-ring protein complement(974734..976425) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141682.1 CDS fliE NC_011147.1 976642 976956 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 976642..976956 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141683.1 CDS SSPA0842 NC_011147.1 977077 977430 R hypothetical protein complement(977077..977430) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141684.1 CDS SSPA0843 NC_011147.1 977729 977962 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(977729..977962) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141685.1 CDS SSPA0844 NC_011147.1 977959 979224 R similar to Salmonella typhi CT18 membrane protein; inner membrane protein complement(977959..979224) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141686.1 CDS SSPA0845 NC_011147.1 979350 979751 D similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 979350..979751 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141687.1 CDS SSPA0846 NC_011147.1 979791 981275 R 'converts 1,4-alpha-D-glucans to maltodextrin'; alpha-amylase complement(979791..981275) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141688.1 CDS SSPA0847 NC_011147.1 981347 981715 R binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT complement(981347..981715) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141689.1 CDS fliS NC_011147.1 981715 982122 R flagellin specific chaperone; flagellar protein FliS complement(981715..982122) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141690.1 CDS fliD NC_011147.1 982137 983540 R involved in flagellin assembly; flagellar capping protein complement(982137..983540) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141691.1 CDS SSPA0850 NC_011147.1 983797 985284 D 'structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes'; flagellin 983797..985284 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141692.1 CDS fliA NC_011147.1 986794 987483 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 986794..987483 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141693.1 CDS SSPA0852 NC_011147.1 987542 988093 D 'expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence'; flagella biosynthesis protein FliZ 987542..988093 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141694.1 CDS SSPA0853 NC_011147.1 988240 989040 D similar to Salmonella typhi CT18 cystine-binding periplasmic protein precursor; cystine transporter subunit 988240..989040 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141695.1 CDS SSPA0854 NC_011147.1 989194 990180 D catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 989194..990180 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141696.1 CDS SSPA0855 NC_011147.1 990201 990869 D similar to Salmonella typhi CT18 ABC transporter membrane protein; ABC transporter membrane protein 990201..990869 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141697.1 CDS SSPA0856 NC_011147.1 990866 991618 D similar to Salmonella typhi Ty2 ABC transport ATP-binding protein; amino-acid ABC transporter ATP-binding protein YecC 990866..991618 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141698.1 CDS SSPA0857 NC_011147.1 991851 992573 D regulates genes involved in cell division; DNA-binding transcriptional activator SdiA 991851..992573 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141699.1 CDS SSPA0858 NC_011147.1 992640 992864 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(992640..992864) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141700.1 CDS SSPA0859 NC_011147.1 992861 993016 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(992861..993016) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141701.1 CDS SSPA0860 NC_011147.1 993328 993984 D in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 993328..993984 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141702.1 CDS uvrC NC_011147.1 993981 995813 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 993981..995813 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141703.1 CDS SSPA0862 NC_011147.1 995870 996418 D similar to Salmonella typhi CT18 phosphotidylglycerophosphate synthetase; phosphatidylglycerophosphate synthetase 995870..996418 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141704.1 CDS SSPA0863 NC_011147.1 997119 997451 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 997119..997451 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141705.1 CDS SSPA0864 NC_011147.1 997671 999104 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 997671..999104 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141706.1 CDS SSPA0865 NC_011147.1 999317 999643 D similar to Salmonella typhimurium glucose-6-phosphate dehydrogenase; glucose-6-phosphate dehydrogenase 999317..999643 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141707.1 CDS SSPA0866 NC_011147.1 999882 1000547 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 999882..1000547 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141708.1 CDS SSPA0867 NC_011147.1 1000622 1001833 R similar to Salmonella typhi CT18 tyrosine-specific transport protein; tyrosine-specific transport protein complement(1000622..1001833) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141709.1 CDS SSPA0868 NC_011147.1 1002060 1002299 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1002060..1002299 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141710.1 CDS SSPA0869 NC_011147.1 1002345 1002842 R cytoplasmic iron storage protein; ferritin complement(1002345..1002842) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141711.1 CDS SSPA0870 NC_011147.1 1003082 1003417 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(1003082..1003417) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141712.1 CDS SSPA0871 NC_011147.1 1003748 1004251 R similar to Salmonella typhi Ty2 ferritin-like protein; ferritin-like protein complement(1003748..1004251) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141713.1 CDS SSPA0872 NC_011147.1 1004801 1005358 D similar to Salmonella typhimurium intracellular protease/amidase; intracellular protease/amidase 1004801..1005358 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141714.1 CDS SSPA0873 NC_011147.1 1005470 1005652 D similar to |434014|emb|CAA48911.1| ofaraH [Escherichia coli]; hypothetical protein 1005470..1005652 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141715.1 CDS SSPA0874 NC_011147.1 1005875 1006678 D biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature; trehalose-6-phosphate phosphatase 1005875..1006678 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141716.1 CDS SSPA0875 NC_011147.1 1006653 1008074 D similar to Salmonella typhi CT18 trehalose-6-phosphate synthase; trehalose-6-phosphate synthase 1006653..1008074 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141717.1 CDS SSPA0876 NC_011147.1 1008092 1008520 R 'ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress'; universal stress protein UspC complement(1008092..1008520) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141718.1 CDS SSPA0877 NC_011147.1 1008517 1008633 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1008517..1008633) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141719.1 CDS SSPA0878 NC_011147.1 1009307 1009657 D with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 1009307..1009657 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141720.1 CDS SSPA0879 NC_011147.1 1009654 1010238 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1009654..1010238 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141721.1 CDS SSPA0880 NC_011147.1 1010421 1011251 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1010421..1011251 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141722.1 CDS motB NC_011147.1 1011248 1012177 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 1011248..1012177 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141723.1 CDS SSPA0882 NC_011147.1 1012182 1014197 D chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 1012182..1014197 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141724.1 CDS SSPA0883 NC_011147.1 1014218 1014721 D similar to Salmonella typhi CT18 purine binding chemotaxis protein; purine-binding chemotaxis protein 1014218..1014721 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141725.1 CDS SSPA0884 NC_011147.1 1016483 1017349 D methylates the MCP; chemotaxis methyltransferase CheR 1016483..1017349 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141726.1 CDS SSPA0885 NC_011147.1 1017346 1018395 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1017346..1018395 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141727.1 CDS SSPA0886 NC_011147.1 1018413 1018802 D 'chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble'; chemotaxis regulatory protein CheY 1018413..1018802 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141728.1 CDS SSPA0887 NC_011147.1 1018813 1019457 D cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 1018813..1019457 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141729.1 CDS flhB NC_011147.1 1019651 1020802 D membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1019651..1020802 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141730.1 CDS flhA NC_011147.1 1020795 1022873 D membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1020795..1022873 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141731.1 CDS SSPA0890 NC_011147.1 1022873 1023265 D similar to Salmonella typhi CT18 flagellar protein FlhE precursor; flagellar protein FlhE 1022873..1023265 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141732.1 CDS SSPA0891 NC_011147.1 1023418 1023876 R similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase complement(1023418..1023876) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141733.1 CDS SSPA0892 NC_011147.1 1024216 1025352 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1024216..1025352 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141734.1 CDS SSPA0893 NC_011147.1 1025406 1027277 R similar to |16122817|ref|NP_406130.1| penicillin-binding protein 2 [Yersinia pestis]; hypothetical protein complement(1025406..1027277) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141735.1 CDS argS NC_011147.1 1027466 1029199 R 'catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase'; arginyl-tRNA synthetase complement(1027466..1029199) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141736.1 CDS SSPA0895 NC_011147.1 1029436 1030005 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1029436..1030005 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141737.1 CDS SSPA0896 NC_011147.1 1030025 1030771 D similar to Salmonella typhi CT18 copper homeostasis protein; copper homeostasis protein CutC 1030025..1030771 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141738.1 CDS SSPA0897 NC_011147.1 1031006 1031977 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1031006..1031977) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141739.1 CDS SSPA0898 NC_011147.1 1031974 1032717 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1031974..1032717) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141740.1 CDS SSPA0899 NC_011147.1 1032758 1033153 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1032758..1033153) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141741.1 CDS SSPA0900 NC_011147.1 1033206 1034024 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1033206..1034024) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141742.1 CDS SSPA0901 NC_011147.1 1034021 1034587 R similar to Salmonella typhi CT18 hydrolase; hypothetical protein complement(1034021..1034587) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141743.1 CDS aspS NC_011147.1 1034912 1036684 D 'catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes'; aspartyl-tRNA synthetase 1034912..1036684 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141744.1 CDS ntpA NC_011147.1 1036787 1037239 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 1036787..1037239 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141745.1 CDS SSPA0904 NC_011147.1 1037269 1038009 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1037269..1038009 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141746.1 CDS ruvC NC_011147.1 1038046 1038567 D endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; holliday junction resolvase 1038046..1038567 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141747.1 CDS SSPA0906 NC_011147.1 1038569 1039168 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1038569..1039168) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141748.1 CDS SSPA0907 NC_011147.1 1039396 1040070 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1039396..1040070 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141749.1 CDS ruvA NC_011147.1 1040430 1041041 D plays an essential role in ATP-dependent branch migration of the Holliday junction; holliday junction DNA helicase RuvA 1040430..1041041 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141750.1 CDS ruvB NC_011147.1 1041050 1042060 D promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1041050..1042060 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141751.1 CDS znuB NC_011147.1 1042139 1042924 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein complement(1042139..1042924) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141752.1 CDS znuC NC_011147.1 1042921 1043676 R involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase complement(1042921..1043676) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141753.1 CDS znuA NC_011147.1 1043740 1044699 D involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 1043740..1044699 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141754.1 CDS SSPA0913 NC_011147.1 1044715 1046034 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1044715..1046034 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141755.1 CDS SSPA0914 NC_011147.1 1046151 1047122 D 'Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA'; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1046151..1047122 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141756.1 CDS SSPA0915 NC_011147.1 1047195 1048637 R catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase complement(1047195..1048637) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141757.1 CDS SSPA0916 NC_011147.1 1048761 1049630 R 'Represses the expression of the zwf, eda, glp and gap'; DNA-binding transcriptional regulator HexR complement(1048761..1049630) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141758.2 CDS SSPA0917 NC_011147.1 1049972 1051447 D similar to Salmonella typhi CT18 glucose 6-phosphate dehydrogenase; glucose 6-phosphate dehydrogenase 1049972..1051447 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141759.1 CDS SSPA0918 NC_011147.1 1051682 1053493 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1051682..1053493 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141760.1 CDS SSPA0919 NC_011147.1 1053531 1054172 D catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 1053531..1054172 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141761.1 CDS purT NC_011147.1 1054272 1055450 R 'non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis'; phosphoribosylglycinamide formyltransferase 2 complement(1054272..1055450) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141762.1 CDS SSPA0921 NC_011147.1 1055939 1056292 D secreted protein; unknown function; hypothetical protein 1055939..1056292 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141763.1 CDS SSPA0922 NC_011147.1 1056386 1057045 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1056386..1057045 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141764.1 CDS SSPA0923 NC_011147.1 1057259 1059310 D PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; protease 2 1057259..1059310 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141765.1 CDS SSPA0924 NC_011147.1 1059347 1060045 R 3'-5' exonuclease activity on single or double-strand DNA; exodeoxyribonuclease X complement(1059347..1060045) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141766.1 CDS SSPA0925 NC_011147.1 1060069 1060725 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1060069..1060725) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141767.1 CDS SSPA0926 NC_011147.1 1060833 1061063 R 'similar to Salmonella typhi CT18 DNA polymerase III, theta subunit'; DNA polymerase III subunit theta complement(1060833..1061063) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141768.1 CDS SSPA0927 NC_011147.1 1061201 1061575 D similar to Salmonella typhi CT18 cation resistance protein; hypothetical protein 1061201..1061575 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141769.1 CDS SSPA0928 NC_011147.1 1061576 1062451 D similar to Salmonella typhi CT18 cation transporter; cation transporter 1061576..1062451 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141770.1 CDS SSPA0929 NC_011147.1 1062468 1062821 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1062468..1062821 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141771.1 CDS SSPA0930 NC_011147.1 1062882 1062998 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1062882..1062998 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141772.1 CDS SSPA0931 NC_011147.1 1064446 1065432 D hypothetical protein 1064446..1065432 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141773.1 CDS SSPA0932 NC_011147.1 1066302 1067072 R similar to |16123493|ref|NP_406806.1| probable extracellular solute-binding protein [Yersinia pestis]; hypothetical protein complement(1066302..1067072) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141774.1 CDS SSPA0933 NC_011147.1 1067720 1068469 R similar to |18265551|gb|AAL67196.1| unknown [Salmonella enterica subsp. enterica serovar Gallinarum]; hypothetical protein complement(1067720..1068469) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141775.1 CDS SSPA0935 NC_011147.1 1070246 1070641 D hypothetical protein 1070246..1070641 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141776.1 CDS SSPA0936 NC_011147.1 1070617 1070769 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1070617..1070769) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141777.1 CDS SSPA0937 NC_011147.1 1070928 1072058 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1070928..1072058) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141778.1 CDS SSPA0938 NC_011147.1 1072454 1074433 D similar to Salmonella typhi Ty2 hydrolase; hydrolase 1072454..1074433 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141779.1 CDS SSPA0939 NC_011147.1 1074451 1074642 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1074451..1074642) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141780.1 CDS SSPA0940 NC_011147.1 1074842 1075456 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1074842..1075456) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141781.1 CDS SSPA0941 NC_011147.1 1075466 1075588 R hypothetical protein complement(1075466..1075588) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141782.1 CDS SSPA0942 NC_011147.1 1075757 1076671 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1075757..1076671) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141783.1 CDS SSPA0943 NC_011147.1 1077960 1078328 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(1077960..1078328) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141784.1 CDS SSPA0944 NC_011147.1 1079793 1079933 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1079793..1079933) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141785.1 CDS SSPA0945 NC_011147.1 1080099 1080368 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1080099..1080368) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141786.1 CDS SSPA0946 NC_011147.1 1080739 1081158 D similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 1080739..1081158 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141787.1 CDS SSPA0947 NC_011147.1 1081534 1082010 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1081534..1082010) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141788.1 CDS SSPA0948 NC_011147.1 1082326 1082733 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1082326..1082733) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141789.1 CDS SSPA0949 NC_011147.1 1083416 1084138 D similar to Salmonella typhimurium Type III-secreted protein effector: invasion-associated protein; type III-secreted protein effector: invasion-associated protein 1083416..1084138 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141790.1 CDS SSPA0950 NC_011147.1 1084423 1084587 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1084423..1084587 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141791.1 CDS pphA NC_011147.1 1084814 1085461 D Plays a key role in signaling protein misfolding via the cpxR/cpxA transducing system; modulates the phosphorylated status of many phosphoproteins; serine/threonine protein phosphatase 1 1084814..1085461 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141792.1 CDS SSPA0952 NC_011147.1 1085480 1085671 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(1085480..1085671) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141793.1 CDS SSPA0953 NC_011147.1 1085782 1086021 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1085782..1086021) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141794.1 CDS yebU NC_011147.1 1086135 1087574 R in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF complement(1086135..1087574) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141795.1 CDS SSPA0955 NC_011147.1 1087652 1090291 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1087652..1090291) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141796.1 CDS SSPA0956 NC_011147.1 1090254 1091537 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1090254..1091537) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141797.1 CDS SSPA0957 NC_011147.1 1091579 1092163 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1091579..1092163 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141798.1 CDS proQ NC_011147.1 1092261 1092947 D affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector 1092261..1092947 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141799.1 CDS SSPA0958 NC_011147.1 1092967 1095015 D Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 1092967..1095015 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141800.1 CDS SSPA0959 NC_011147.1 1095209 1096090 D metalloprotease; heat shock protein HtpX 1095209..1096090 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141801.1 CDS SSPA0960 NC_011147.1 1096138 1097511 R similar to Salmonella typhimurium transport protein; transporter complement(1096138..1097511) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141802.1 CDS SSPA0961 NC_011147.1 1097687 1098478 D similar to Salmonella typhi CT18 transcriptional regulator KdgR; transcriptional regulator KdgR 1097687..1098478 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141803.1 CDS SSPA0962 NC_011147.1 1098690 1098929 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(1098690..1098929) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141804.1 CDS SSPA0963 NC_011147.1 1099087 1099230 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1099087..1099230 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141805.1 CDS SSPA0964 NC_011147.1 1099301 1099588 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1099301..1099588 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141806.1 CDS SSPA0965 NC_011147.1 1100237 1100380 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1100237..1100380 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141807.1 CDS SSPA0966 NC_011147.1 1100393 1100602 D similar to Salmonella typhi CT18 cold shock-like protein CspC; cold shock-like protein CspC 1100393..1100602 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141808.1 CDS SSPA0967 NC_011147.1 1100822 1102567 D similar to Salmonella typhi Ty2 penicillin-binding protein; penicillin-binding protein 1100822..1102567 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141809.1 CDS rrmA NC_011147.1 1102633 1103442 D methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A 1102633..1103442 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141810.1 CDS SSPA0969 NC_011147.1 1103439 1104059 R membrane protein YebN; hypothetical protein complement(1103439..1104059) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141811.1 CDS SSPA0970 NC_011147.1 1104415 1104873 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1104415..1104873) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141812.1 CDS SSPA0971 NC_011147.1 1104931 1105782 R hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID complement(1104931..1105782) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141813.1 CDS SSPA0972 NC_011147.1 1105795 1106595 R 'similar to Salmonella typhi CT18 phosphotransferase enzyme II, C component'; phosphotransferase enzyme II subunit C complement(1105795..1106595) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141814.1 CDS SSPA0973 NC_011147.1 1106648 1107616 R 'similar to Salmonella typhi CT18 PTS system,mannose-specific IIAB component'; PTS system mannose-specific transporter subunit IIAB complement(1106648..1107616) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141815.1 CDS SSPA0974 NC_011147.1 1107769 1108101 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1107769..1108101 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141816.1 CDS SSPA0975 NC_011147.1 1108089 1109648 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1108089..1109648 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141817.2 CDS SSPA0976 NC_011147.1 1109670 1111271 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1109670..1111271) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141818.1 CDS SSPA0977 NC_011147.1 1111409 1112755 R similar to Salmonella typhi CT18 L-serine deaminase 1; L-serine deaminase 1 complement(1111409..1112755) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141819.1 CDS SSPA0978 NC_011147.1 1113037 1113615 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1113037..1113615) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141820.1 CDS SSPA0979 NC_011147.1 1113619 1114983 R similar to Salmonella typhi CT18 para-aminobenzoate synthase component I; para-aminobenzoate synthase component I complement(1113619..1114983) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141821.1 CDS SSPA0980 NC_011147.1 1115064 1115243 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1115064..1115243 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141822.1 CDS SSPA0981 NC_011147.1 1115249 1115593 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1115249..1115593) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141823.1 CDS SSPA0982 NC_011147.1 1115725 1117635 D similar to Salmonella typhi CT18 ATP-dependent helicase; ATP-dependent helicase 1115725..1117635 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141824.1 CDS SSPA0983 NC_011147.1 1117693 1118388 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1117693..1118388 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141825.1 CDS SSPA0984 NC_011147.1 1118460 1119041 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1118460..1119041 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141826.1 CDS SSPA0985 NC_011147.1 1119246 1120931 D Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1119246..1120931 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141827.1 CDS SSPA0986 NC_011147.1 1121016 1122131 D similar to Salmonella typhi CT18 ribonuclease D; ribonuclease D 1121016..1122131 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141828.1 CDS minE NC_011147.1 1122253 1122519 R works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE complement(1122253..1122519) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141829.1 CDS SSPA0988 NC_011147.1 1122523 1123335 R ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD complement(1122523..1123335) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141830.1 CDS minC NC_011147.1 1123359 1124066 R blocks the formation of polar Z-ring septums; septum formation inhibitor complement(1123359..1124066) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141831.1 CDS SSPA0990 NC_011147.1 1124153 1124485 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1124153..1124485 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141832.1 CDS SSPA0991 NC_011147.1 1124535 1125194 D similar to Salmonella typhi CT18 hydrolase; hypothetical protein 1124535..1125194 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141833.1 CDS SSPA0992 NC_011147.1 1125287 1125733 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1125287..1125733 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141834.1 CDS SSPA0993 NC_011147.1 1126415 1126588 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1126415..1126588 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141835.1 CDS SSPA0994 NC_011147.1 1126660 1127001 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1126660..1127001) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141836.1 CDS SSPA0995 NC_011147.1 1127110 1127640 R disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B complement(1127110..1127640) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141837.1 CDS nhaB NC_011147.1 1127782 1129326 R involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter complement(1127782..1129326) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141838.1 CDS SSPA0997 NC_011147.1 1129546 1130265 D Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 1129546..1130265 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141839.1 CDS SSPA0998 NC_011147.1 1130312 1131844 R similar to Salmonella typhi CT18 conserved hypothetical protein; SpoVR family protein complement(1130312..1131844) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141840.1 CDS SSPA0999 NC_011147.1 1132167 1133465 D catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 1132167..1133465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141841.1 CDS dadX NC_011147.1 1133479 1134549 D 'catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA'; alanine racemase 1133479..1134549 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141842.1 CDS SSPA1001 NC_011147.1 1134612 1136345 R the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter complement(1134612..1136345) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141843.1 CDS ldcA NC_011147.1 1136442 1137356 R catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A complement(1136442..1137356) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141844.1 CDS SSPA1003 NC_011147.1 1137527 1138138 D similar to Salmonella typhi Ty2 membrane-bound lytic murein transglycosylase E; membrane-bound lytic murein transglycosylase E 1137527..1138138 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141845.1 CDS SSPA1004 NC_011147.1 1139054 1139308 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1139054..1139308 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141846.1 CDS treA NC_011147.1 1139371 1141083 R periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell; trehalase complement(1139371..1141083) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141847.1 CDS SSPA1006 NC_011147.1 1141297 1142622 R glutamate dehydrogenase complement(1141297..1142622) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141848.1 CDS SSPA1007 NC_011147.1 1142966 1143055 R expressed during stationary phase; hypothetical protein complement(1142966..1143055) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141849.1 CDS SSPA1008 NC_011147.1 1143068 1144204 R similar to Salmonella typhi CT18 probable cytochrome oxidase subunit II; cytochrome oxidase subunit II complement(1143068..1144204) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141850.1 CDS SSPA1009 NC_011147.1 1144216 1145760 R 'similar to Escherichia coli K12 probable third cytochrome oxidase, subunit I'; third cytochrome oxidase, subunit I complement(1144216..1145760) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141851.1 CDS SSPA1010 NC_011147.1 1145835 1146683 R similar to Salmonella typhi CT18 hydrogenase-1 operon protein HyaF; hydrogenase-1 operon protein HyaF complement(1145835..1146683) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141852.1 CDS SSPA1011 NC_011147.1 1146680 1147084 R involved in processing hydrogenase proteins HyaA and HyaB; hydrogenase-1 operon protein HyaE complement(1146680..1147084) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141853.1 CDS SSPA1012 NC_011147.1 1147074 1147670 R HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1); hydrogenase 1 maturation protease complement(1147074..1147670) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141854.1 CDS SSPA1013 NC_011147.1 1147667 1148398 R similar to Salmonella typhi CT18 probable Ni/Fe-hydrogenase 1 b-type cytochrome subunit; hydrogenase 1 b-type cytochrome subunit complement(1147667..1148398) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141855.1 CDS SSPA1014 NC_011147.1 1148417 1150210 R involved in hydrogen cycling during fermentative growth; hydrogenase 1 large subunit complement(1148417..1150210) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141856.1 CDS SSPA1015 NC_011147.1 1151809 1153074 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1151809..1153074 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141857.1 CDS SSPA1016 NC_011147.1 1153233 1154324 R translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD complement(1153233..1154324) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141858.1 CDS SSPA1017 NC_011147.1 1154441 1155049 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(1154441..1155049) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141859.1 CDS SSPA1018 NC_011147.1 1155301 1155579 D 'YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function'; hypothetical protein 1155301..1155579 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141860.1 CDS SSPA1019 NC_011147.1 1155624 1157309 R role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM complement(1155624..1157309) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141861.1 CDS SSPA1020 NC_011147.1 1157434 1158381 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(1157434..1158381) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141862.1 CDS ipk NC_011147.1 1158647 1159495 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(1158647..1159495) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141863.1 CDS lolB NC_011147.1 1159495 1160118 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(1159495..1160118) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141864.1 CDS hemA NC_011147.1 1160432 1161688 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1160432..1161688 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141865.1 CDS prfA NC_011147.1 1161729 1162811 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1161729..1162811 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141866.1 CDS SSPA1025 NC_011147.1 1162811 1163644 D HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1162811..1163644 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141867.1 CDS SSPA1026 NC_011147.1 1163641 1164030 D similar to Salmonella typhi CT18 regulator; transcriptional regulator 1163641..1164030 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141868.1 CDS SSPA1027 NC_011147.1 1164034 1164843 D similar to Salmonella typhi CT18 regulator; transcriptional regulator 1164034..1164843 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141869.1 CDS SSPA1028 NC_011147.1 1164881 1165735 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1164881..1165735 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141870.1 CDS SSPA1029 NC_011147.1 1165789 1166889 R similar to Salmonella typhi CT18 calcium/proton antiporter; calcium/sodium:proton antiporter complement(1165789..1166889) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141871.1 CDS SSPA1030 NC_011147.1 1167466 1167819 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1167466..1167819) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141872.1 CDS SSPA1031 NC_011147.1 1167996 1169420 D similar to Salmonella typhi CT18 invasin; hypothetical protein 1167996..1169420 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141873.1 CDS SSPA1032 NC_011147.1 1169421 1170071 R two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL complement(1169421..1170071) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141874.1 CDS SSPA1033 NC_011147.1 1170064 1171860 R similar to Salmonella typhi CT18 nitrate/nitrite sensor protein NarX; nitrate/nitrite sensor protein NarX complement(1170064..1171860) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141875.1 CDS SSPA1034 NC_011147.1 1172201 1173598 D similar to Salmonella typhi CT18 nitrite extrusion protein (nitrite facilitator); nitrite extrusion protein 1172201..1173598 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141876.1 CDS SSPA1035 NC_011147.1 1173987 1177730 D similar to Salmonella typhi CT18 respiratory nitrate reductase 1 alpha chain; respiratory nitrate reductase 1 subunit alpha 1173987..1177730 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141877.1 CDS SSPA1036 NC_011147.1 1177727 1179262 D similar to Salmonella typhi CT18 respiratory nitrate reductase 1 beta chain; respiratory nitrate reductase 1 subunit beta 1177727..1179262 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141878.1 CDS SSPA1037 NC_011147.1 1179259 1179969 D similar to Salmonella typhi CT18 respiratory nitrate reductase 1 delta chain; respiratory nitrate reductase 1 subunit delta 1179259..1179969 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141879.1 CDS SSPA1038 NC_011147.1 1179969 1180646 D similar to Salmonella typhi CT18 respiratory nitrate reductase 1 gamma chain; respiratory nitrate reductase 1 subunit gamma 1179969..1180646 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141880.1 CDS SSPA1039 NC_011147.1 1180942 1182417 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1180942..1182417 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141881.1 CDS SSPA1040 NC_011147.1 1183374 1183703 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1183374..1183703 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141882.1 CDS purU NC_011147.1 1183764 1184606 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(1183764..1184606) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141883.1 CDS SSPA1042 NC_011147.1 1184657 1185115 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(1184657..1185115) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141884.1 CDS SSPA1043 NC_011147.1 1185226 1186131 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1185226..1186131 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141885.1 CDS SSPA1044 NC_011147.1 1186222 1187235 D similar to Salmonella typhi CT18 regulatory protein; response regulator of RpoS 1186222..1187235 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141886.1 CDS SSPA1045 NC_011147.1 1187438 1188346 D 'together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose'; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1187438..1188346 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141887.1 CDS SSPA1046 NC_011147.1 1188477 1188890 R similar to Salmonella typhi CT18 DNA-binding protein (histone-like protein Hlp-II); global DNA-binding transcriptional dual regulator H-NS complement(1188477..1188890) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141888.1 CDS SSPA1047 NC_011147.1 1189553 1190170 D catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 1189553..1190170 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141889.1 CDS SSPA1048 NC_011147.1 1190367 1193045 R similar to Salmonella typhi Ty2 alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase complement(1190367..1193045) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141890.1 CDS SSPA1049 NC_011147.1 1193522 1194169 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1193522..1194169 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141891.1 CDS SSPA1050 NC_011147.1 1194829 1196577 D similar to Salmonella typhi CT18 periplasmic oligopeptide-binding protein precursor; periplasmic oligopeptide-binding protein 1194829..1196577 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141892.1 CDS oppB NC_011147.1 1196699 1197619 D similar to Salmonella typhi CT18 oligopeptide transport system permease protein OppB; oligopeptide transporter permease 1196699..1197619 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141893.1 CDS SSPA1052 NC_011147.1 1197634 1198542 D 'similar to Salmonella typhimurium ABC superfamily (membrane), oligopeptide transport protein'; oligopeptide ABC transporter membrane protein 1197634..1198542 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141894.1 CDS oppD NC_011147.1 1198554 1199561 D similar to Salmonella typhi CT18 oligopeptide transport ATP-binding protein OppD; oligopeptide transporter ATP-binding protein 1198554..1199561 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141895.1 CDS SSPA1054 NC_011147.1 1199558 1200562 D similar to Salmonella typhi CT18 oligopeptide transport ATP-binding protein OppF; oligopeptide transport ATP-binding protein OppF 1199558..1200562 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141896.1 CDS SSPA1055 NC_011147.1 1200664 1201446 D similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein 1200664..1201446 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141897.1 CDS SSPA1056 NC_011147.1 1201494 1201823 R highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein complement(1201494..1201823) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141898.1 CDS cls NC_011147.1 1201857 1203317 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(1201857..1203317) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141899.1 CDS SSPA1058 NC_011147.1 1203677 1203973 R 'unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity'; YciI-like protein complement(1203677..1203973) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141900.1 CDS SSPA1059 NC_011147.1 1204197 1204925 D 'membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins'; transporter 1204197..1204925 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141901.1 CDS SSPA1060 NC_011147.1 1204984 1205385 R YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase complement(1204984..1205385) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141902.1 CDS SSPA1061 NC_011147.1 1205546 1206085 R Involved in cell division; probably involved in intracellular septation; intracellular septation protein A complement(1205546..1206085) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141903.1 CDS SSPA1062 NC_011147.1 1206142 1206885 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1206142..1206885) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141904.1 CDS SSPA1063 NC_011147.1 1206911 1207315 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1206911..1207315) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141905.1 CDS SSPA1064 NC_011147.1 1207653 1208291 D receptor for colicin S4; outer membrane protein W 1207653..1208291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141906.1 CDS SSPA1065 NC_011147.1 1208373 1209251 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1208373..1209251) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141907.1 CDS SSPA1066 NC_011147.1 1209271 1209777 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1209271..1209777) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141908.1 CDS SSPA1067 NC_011147.1 1209851 1210354 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1209851..1210354) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141909.1 CDS SSPA1068 NC_011147.1 1210444 1210626 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1210444..1210626) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141910.1 CDS trpA NC_011147.1 1211106 1211912 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1211106..1211912) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141911.1 CDS SSPA1070 NC_011147.1 1211912 1213105 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1211912..1213105) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141912.1 CDS SSPA1071 NC_011147.1 1213115 1214473 R monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1213115..1214473) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141913.1 CDS SSPA1073 NC_011147.1 1216072 1217634 R 'with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine'; anthranilate synthase component I complement(1216072..1217634) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141914.1 CDS SSPA1074 NC_011147.1 1217895 1218776 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1217895..1218776 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141915.1 CDS SSPA1075 NC_011147.1 1218784 1219404 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1218784..1219404 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141916.1 CDS SSPA1076 NC_011147.1 1219505 1220380 D catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 1219505..1220380 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141917.1 CDS SSPA1077 NC_011147.1 1220467 1221057 R 'catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide'; cob(I)yrinic acid a,c-diamide adenosyltransferase complement(1220467..1221057) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141918.1 CDS SSPA1078 NC_011147.1 1221054 1221815 R similar to Salmonella typhi CT18 hypothetical oxidoreductase; short chain dehydrogenase complement(1221054..1221815) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141919.1 CDS SSPA1079 NC_011147.1 1222053 1223099 D SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 1222053..1223099 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141920.1 CDS SSPA1080 NC_011147.1 1223141 1223392 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1223141..1223392) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141921.1 CDS SSPA1081 NC_011147.1 1223795 1226392 D 'catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity'; DNA topoisomerase I 1223795..1226392 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141922.1 CDS cysB NC_011147.1 1226803 1227777 D LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 1226803..1227777 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141923.1 CDS SSPA1083 NC_011147.1 1228754 1231429 D Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1228754..1231429 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141924.1 CDS ribA NC_011147.1 1231485 1232075 R 'catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate'; GTP cyclohydrolase II complement(1231485..1232075) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141925.1 CDS SSPA1085 NC_011147.1 1232271 1233035 D similar to Salmonella typhi CT18 phosphatidylglycerophosphatase B; phosphatidylglycerophosphatase B 1232271..1233035 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141926.1 CDS SSPA1086 NC_011147.1 1233185 1233493 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1233185..1233493 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141927.1 CDS SSPA1087 NC_011147.1 1233554 1234669 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1233554..1234669 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141928.1 CDS SSPA1088 NC_011147.1 1234860 1235597 D type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1234860..1235597 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141929.1 CDS SSPA1089 NC_011147.1 1235597 1235923 D involved in start site selection during the initiation of translation; translation initiation factor Sui1 1235597..1235923 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141930.1 CDS SSPA1090 NC_011147.1 1236520 1237272 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1236520..1237272) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141931.1 CDS SSPA1091 NC_011147.1 1237359 1237547 R hypothetical protein complement(1237359..1237547) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141932.1 CDS SSPA1092 NC_011147.1 1237660 1239642 R c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; RNase II stability modulator complement(1237660..1239642) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141933.1 CDS SSPA1093 NC_011147.1 1239904 1241838 R Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II complement(1239904..1241838) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141934.1 CDS SSPA1094 NC_011147.1 1241927 1243060 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1241927..1243060) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141935.1 CDS SSPA1095 NC_011147.1 1243260 1244048 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase complement(1243260..1244048) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141936.1 CDS SSPA1096 NC_011147.1 1246502 1247209 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1246502..1247209 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141937.1 CDS SSPA1097 NC_011147.1 1247225 1248031 R similar to Salmonella typhi CT18 peptide transport system ATP-binding protein SapF; peptide transport system ATP-binding protein SapF complement(1247225..1248031) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141938.1 CDS SSPA1098 NC_011147.1 1248033 1249025 R similar to Salmonella typhi CT18 peptide transport system ATP-binding protein SapD; peptide transport system ATP-binding protein SapD complement(1248033..1249025) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141939.1 CDS SSPA1099 NC_011147.1 1249025 1249915 R similar to Salmonella typhi CT18 peptide transport system permease protein SapC; peptide transport system permease SapC complement(1249025..1249915) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141940.1 CDS SSPA1100 NC_011147.1 1250038 1250439 D integrase 1250038..1250439 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141941.1 CDS SSPA1101 NC_011147.1 1250739 1251623 R hypothetical protein complement(1250739..1251623) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141942.1 CDS SSPA1102 NC_011147.1 1251933 1252346 D similar to |31044260|ref|NP_851974.1| hypothetical protein phi4795p35 [Phage phi 4795]; hypothetical protein 1251933..1252346 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141943.1 CDS SSPA1104 NC_011147.1 1253003 1253362 D similar to Salmonella typhi CT18 hypothetical periplasmic protein; hypothetical protein 1253003..1253362 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141944.1 CDS SSPA1105 NC_011147.1 1254157 1254294 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1254157..1254294 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141945.2 CDS SSPA1106 NC_011147.1 1254326 1255291 R similar to Salmonella typhi CT18 peptide transport system permease protein SapB; peptide transport system permease SapB complement(1254326..1255291) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141946.1 CDS SSPA1107 NC_011147.1 1255288 1256937 R similar to Salmonella typhi CT18 peptide transport periplasmic protein SapA precursor; peptide transport periplasmic protein SapA complement(1255288..1256937) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141947.1 CDS pspF NC_011147.1 1257049 1258029 R 'transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor'; phage shock protein operon transcriptional activator complement(1257049..1258029) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141948.1 CDS SSPA1109 NC_011147.1 1258200 1258868 D involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 1258200..1258868 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141949.1 CDS pspB NC_011147.1 1258928 1259152 D 'acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding'; phage shock protein B 1258928..1259152 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141950.1 CDS SSPA1111 NC_011147.1 1259152 1259511 D 'with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock'; DNA-binding transcriptional activator PspC 1259152..1259511 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141951.1 CDS SSPA1112 NC_011147.1 1259534 1259752 D similar to Salmonella typhi CT18 phage shock protein D; peripheral inner membrane phage-shock protein 1259534..1259752 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141952.1 CDS SSPA1113 NC_011147.1 1259828 1260142 D rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide; thiosulfate:cyanide sulfurtransferase 1259828..1260142 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141953.1 CDS SSPA1114 NC_011147.1 1260291 1261688 D similar to Salmonella typhi CT18 ATP-binding protein; ATP-binding protein 1260291..1261688 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141954.1 CDS SSPA1115 NC_011147.1 1261685 1262746 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1261685..1262746 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141955.1 CDS SSPA1116 NC_011147.1 1262894 1264435 D regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 1262894..1264435 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141956.1 CDS tpx NC_011147.1 1264525 1265031 R antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase complement(1264525..1265031) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141957.1 CDS SSPA1118 NC_011147.1 1265147 1266112 D similar to Salmonella typhi Ty2 mandelate racemase; mandelate racemase 1265147..1266112 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141958.1 CDS SSPA1119 NC_011147.1 1266087 1266815 R similar to Salmonella typhi CT18 conserved hypothetical protein; murein peptide amidase A complement(1266087..1266815) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141959.1 CDS SSPA1120 NC_011147.1 1267005 1268618 D similar to Salmonella typhi CT18 periplasmic murein peptide-binding protein MppA; periplasmic murein peptide-binding protein MppA 1267005..1268618 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141960.1 CDS SSPA1121 NC_011147.1 1269762 1270667 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1269762..1270667 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141961.1 CDS SSPA1122 NC_011147.1 1270943 1271812 D similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1270943..1271812 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141962.1 CDS SSPA1123 NC_011147.1 1271903 1272616 R similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase complement(1271903..1272616) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141963.1 CDS SSPA1124 NC_011147.1 1272694 1273284 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1272694..1273284 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141964.1 CDS SSPA1125 NC_011147.1 1273413 1273649 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1273413..1273649 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141965.1 CDS SSPA1126 NC_011147.1 1275359 1276210 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(1275359..1276210) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141966.1 CDS SSPA1127 NC_011147.1 1276508 1277353 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1276508..1277353 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141967.1 CDS SSPA1128 NC_011147.1 1279438 1280265 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1279438..1280265 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141968.1 CDS SSPA1129 NC_011147.1 1280364 1280921 D similar to Salmonella typhi CT18 thiol peroxidase; thiol peroxidase 1280364..1280921 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141969.1 CDS SSPA1130 NC_011147.1 1281028 1281366 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1281028..1281366) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141970.1 CDS SSPA1131 NC_011147.1 1281394 1282080 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1281394..1282080) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141971.1 CDS SSPA1132 NC_011147.1 1282124 1282726 D similar to Salmonella typhi CT18 conserved hypothetical DNA-binding protein; hypothetical protein 1282124..1282726 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141972.1 CDS SSPA1133 NC_011147.1 1282812 1283843 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1282812..1283843) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141973.1 CDS SSPA1134 NC_011147.1 1284082 1284336 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1284082..1284336 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141974.1 CDS SSPA1135 NC_011147.1 1284391 1285338 R with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE complement(1284391..1285338) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141975.1 CDS SSPA1136 NC_011147.1 1285489 1286283 R Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator complement(1285489..1286283) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141976.1 CDS SSPA1137 NC_011147.1 1286437 1286952 R similar to Salmonella typhi CT18 O6-methylguanine-DNA-alkyltransferase; O-6-alkylguanine-DNA:cysteine-protein methyltransferase complement(1286437..1286952) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141977.1 CDS SSPA1138 NC_011147.1 1287217 1287780 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1287217..1287780 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141978.1 CDS zntB NC_011147.1 1289491 1290474 D similar to Salmonella typhi CT18 membrane transport protein; zinc transporter 1289491..1290474 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141979.1 CDS SSPA1140 NC_011147.1 1290961 1292334 D 'exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA'; ATP-dependent RNA helicase DbpA 1290961..1292334 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141980.1 CDS SSPA1141 NC_011147.1 1292378 1293313 R TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase complement(1292378..1293313) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141981.1 CDS SSPA1142 NC_011147.1 1294001 1295833 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1294001..1295833 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141982.1 CDS SSPA1143 NC_011147.1 1296108 1296446 D similar to Salmonella typhi CT18 multidrug transporter; multidrug transporter 1296108..1296446 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141983.1 CDS SSPA1144 NC_011147.1 1296499 1296933 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1296499..1296933) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141984.1 CDS SSPA1145 NC_011147.1 1297415 1300939 R similar to Salmonella typhi CT18 probable pyruvate-flavodoxin oxidoreductase; pyruvate-flavodoxin oxidoreductase complement(1297415..1300939) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141985.2 CDS SSPA1146 NC_011147.1 1301215 1301481 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1301215..1301481 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141986.1 CDS SSPA1147 NC_011147.1 1301525 1301935 R similar to Salmonella typhi CT18 heat shock protein; heat-inducible protein complement(1301525..1301935) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141987.1 CDS SSPA1148 NC_011147.1 1302046 1303035 R similar to Salmonella typhi CT18 D-lactate dehydrogenase; D-lactate dehydrogenase complement(1302046..1303035) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141988.1 CDS SSPA1149 NC_011147.1 1303275 1305911 D similar to Salmonella typhimurium periplasmic protein; hypothetical protein 1303275..1305911 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141989.1 CDS SSPA1150 NC_011147.1 1305911 1306102 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1305911..1306102 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141990.1 CDS SSPA1151 NC_011147.1 1306110 1306433 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1306110..1306433 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141991.1 CDS SSPA1152 NC_011147.1 1306573 1307022 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1306573..1307022 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141992.1 CDS SSPA1153 NC_011147.1 1307019 1307624 R FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase complement(1307019..1307624) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141993.1 CDS SSPA1154 NC_011147.1 1307825 1311727 D 'involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain'; ATP-dependent RNA helicase HrpA 1307825..1311727 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141994.1 CDS SSPA1155 NC_011147.1 1311791 1313098 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 1311791..1313098 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141995.1 CDS mdoD NC_011147.1 1313318 1314973 D involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 1313318..1314973 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141996.1 CDS SSPA1157 NC_011147.1 1315178 1315744 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1315178..1315744 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141997.1 CDS SSPA1158 NC_011147.1 1315756 1316958 D similar to Salmonella typhi CT18 glycolate oxidase; glycolate oxidase 1315756..1316958 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141998.1 CDS SSPA1159 NC_011147.1 1317013 1317450 R similar to Salmonella typhi CT18 aminoglycoside 6'-N-acetyltransferase; aminoglycoside 6'-N-acetyltransferase complement(1317013..1317450) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002141999.1 CDS SSPA1160 NC_011147.1 1317450 1318241 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1317450..1318241) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142000.1 CDS SSPA1161 NC_011147.1 1318257 1318889 R similar to Salmonella typhi CT18 ribulose-5-phosphate 3-epimerase; epimerase complement(1318257..1318889) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142001.1 CDS SSPA1162 NC_011147.1 1318901 1319338 R similar to Salmonella typhi CT18 phosphotransferase enzyme; phosphotransferase protein complement(1318901..1319338) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142002.1 CDS SSPA1163 NC_011147.1 1319470 1320276 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1319470..1320276) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142003.1 CDS SSPA1164 NC_011147.1 1320290 1321603 R similar to Salmonella typhi CT18 phosphotransferase enzyme; phosphotransferase protein complement(1320290..1321603) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142004.1 CDS SSPA1165 NC_011147.1 1321614 1321895 R similar to Salmonella typhi CT18 phosphotransferase enzyme; phosphotransferase protein complement(1321614..1321895) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142005.1 CDS SSPA1166 NC_011147.1 1321892 1323010 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1321892..1323010) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142006.1 CDS SSPA1167 NC_011147.1 1323227 1323766 D similar to Salmonella typhi CT18 ribosomal-protein-serine acetyltransferase; ribosomal-protein-L7/L12-serine acetyltransferase 1323227..1323766 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142007.1 CDS SSPA1168 NC_011147.1 1323763 1324743 R similar to Salmonella typhi CT18 transferase; transferase complement(1323763..1324743) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142008.1 CDS SSPA1169 NC_011147.1 1324850 1325863 D similar to Salmonella typhi CT18 tellurite resistance protein TehA; potassium-tellurite ethidium and proflavin transporter 1324850..1325863 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142009.1 CDS SSPA1170 NC_011147.1 1325850 1326446 D with TehA confers resistance to tellurite; tellurite resistance protein TehB 1325850..1326446 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142010.1 CDS SSPA1171 NC_011147.1 1326602 1327270 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1326602..1327270 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142011.1 CDS SSPA1172 NC_011147.1 1328480 1330444 D similar to Salmonella typhi CT18 peptidase; peptidase 1328480..1330444 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142012.1 CDS SSPA1173 NC_011147.1 1330445 1330675 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1330445..1330675) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142013.1 CDS SSPA1174 NC_011147.1 1332427 1332825 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1332427..1332825 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142014.1 CDS SSPA1175 NC_011147.1 1332858 1333088 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1332858..1333088 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142016.1 CDS SSPA1177 NC_011147.1 1333350 1334120 D similar to Salmonella typhi Ty2 D-alanyl-D-alanine dipeptidase; D-alanyl-D-alanine dipeptidase 1333350..1334120 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142017.1 CDS SSPA1178 NC_011147.1 1334256 1335680 D similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1334256..1335680 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142018.1 CDS SSPA1179 NC_011147.1 1335795 1337240 D catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1335795..1337240 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142019.1 CDS SSPA1180 NC_011147.1 1337639 1337812 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 1337639..1337812 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142020.1 CDS SSPA1181 NC_011147.1 1337857 1340001 R similar to Salmonella typhi CT18 virulence effector protein; virulence effector protein complement(1337857..1340001) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142021.1 CDS SSPA1182 NC_011147.1 1339998 1342979 R similar to Salmonella typhi CT18 virulence effector protein; virulence effector protein complement(1339998..1342979) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142022.2 CDS SSPA1183 NC_011147.1 1342984 1344309 R similar to Salmonella typhi CT18 virulence effector protein; virulence effector protein complement(1342984..1344309) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142023.1 CDS SSPA1184 NC_011147.1 1344533 1344766 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1344533..1344766 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142024.1 CDS SSPA1185 NC_011147.1 1344771 1345220 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1344771..1345220) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142025.1 CDS SSPA1186 NC_011147.1 1345220 1345735 R similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase complement(1345220..1345735) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142026.1 CDS SSPA1187 NC_011147.1 1345914 1346984 D similar to Salmonella typhi CT18 NADP-dependent oxidoreductase; NADP-dependent oxidoreductase 1345914..1346984 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142027.1 CDS SSPA1188 NC_011147.1 1347318 1347983 D similar to Salmonella typhi CT18 regulatory protein; DNA-binding transcriptional regulator 1347318..1347983 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142028.1 CDS SSPA1190 NC_011147.1 1348039 1350159 R similar to Salmonella typhi Ty2 probable TonB-dependent receptor; TonB-dependent receptor complement(1348039..1350159) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142029.1 CDS SSPA1191 NC_011147.1 1350423 1351484 D similar to Salmonella typhi CT18 possible ATP-binding protein; ATP-binding protein 1350423..1351484 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142030.1 CDS SSPA1192 NC_011147.1 1351629 1351850 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1351629..1351850 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142031.1 CDS SSPA1193 NC_011147.1 1351927 1353420 R similar to Salmonella typhi CT18 L-asparagine permease; L-asparagine permease complement(1351927..1353420) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142032.1 CDS SSPA1194 NC_011147.1 1353933 1354565 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1353933..1354565 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142033.1 CDS SSPA1195 NC_011147.1 1354848 1355693 D similar to Salmonella typhi CT18 N-hydroxyarylamine O-acetyltransferase; N-hydroxyarylamine O-acetyltransferase 1354848..1355693 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142034.1 CDS SSPA1196 NC_011147.1 1355729 1356622 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1355729..1356622) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142035.1 CDS SSPA1197 NC_011147.1 1356728 1357408 R 'similar to Salmonella typhimurium nitrate reductase 2, gamma subunit'; nitrate reductase subunit gamma complement(1356728..1357408) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142036.1 CDS SSPA1198 NC_011147.1 1358086 1359630 R similar to Salmonella typhi CT18 respiratory nitrate reductase 2 beta chain; respiratory nitrate reductase 2 subunit beta complement(1358086..1359630) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142037.1 CDS SSPA1199 NC_011147.1 1359627 1363367 R similar to Salmonella typhi CT18 respiratory nitrate reductase 2 alpha chain; respiratory nitrate reductase 2 subunit alpha complement(1359627..1363367) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142038.1 CDS SSPA1201 NC_011147.1 1363459 1364847 R similar to Salmonella typhi CT18 nitrite extrusion protein; nitrite extrusion protein complement(1363459..1364847) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142040.1 CDS SSPA1202 NC_011147.1 1365061 1365639 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1365061..1365639) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142041.1 CDS SSPA1203 NC_011147.1 1365757 1367244 D similar to Salmonella typhi CT18 methyl viologen resistance protein SmvA; methyl viologen resistance protein SmvA 1365757..1367244 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142042.1 CDS SSPA1204 NC_011147.1 1367269 1367709 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(1367269..1367709) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142043.1 CDS SSPA1204b NC_011147.1 1368779 1369987 R IS10; IS10 transposase complement(1368779..1369987) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142044.1 CDS SSPA1205 NC_011147.1 1370742 1371566 R similar to Salmonella typhimurium permease; hypothetical protein complement(1370742..1371566) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142045.1 CDS SSPA1206 NC_011147.1 1371901 1374948 D 'similar to Salmonella typhimurium molybdopterin oxidoreductases; selenocysteine; Highly similar to Escherichia coli formate dehydrogenase-O, major subunit fdoG SW:FDOG_ECOLI (P32176; P78131) (1016 aa). Contains a stop codon which is encoded as a selenocysteine by the opal codon UGA.'; molybdopterin oxidoreductases join(1371901..1372486,1372538..1374948) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142046.1 CDS SSPA1207 NC_011147.1 1374962 1375846 D 'similar to Salmonella typhimurium formate dehydrogenase-N, Fe-S beta subunit, nitrate-inducible'; formate dehydrogenase-N, Fe-S subunit beta join(1374962..1375547,1375599..1375846) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142047.1 CDS SSPA1208 NC_011147.1 1375854 1376495 D 'nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase'; formate dehydrogenase-N subunit gamma 1375854..1376495 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142048.1 CDS SSPA1209 NC_011147.1 1376586 1377596 R similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; alcohol dehydrogenase complement(1376586..1377596) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142049.1 CDS SSPA1210 NC_011147.1 1377898 1379631 R malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase complement(1377898..1379631) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142050.1 CDS rpsV NC_011147.1 1379772 1379915 R protein D; stationary-phase-induced ribosome-associated; in Escherichia coli this protein becomes associated with the ribosome; expression increases during stationary phase; 30S ribosomal subunit S22 complement(1379772..1379915) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142051.1 CDS SSPA1212 NC_011147.1 1380010 1380225 R similar to Salmonella typhi CT18 conserved hypothetical protein; biofilm-dependent modulation protein complement(1380010..1380225) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142052.1 CDS SSPA1213 NC_011147.1 1380737 1381168 D similar to Salmonella typhi CT18 osmotically inducible protein C; osmotically inducible protein C 1380737..1381168 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142053.1 CDS hlyE NC_011147.1 1381289 1382206 R Acts by forming a pore-like structure upon contact with mammalian cells; hemolysin E complement(1381289..1382206) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142054.1 CDS hdeB NC_011147.1 1383743 1384072 D similar to Salmonella typhi CT18 secreted protein; acid-resistance protein 1383743..1384072 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142055.2 CDS SSPA1216 NC_011147.1 1384215 1385000 D hypothetical protein 1384215..1385000 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142056.1 CDS SSPA1217 NC_011147.1 1385129 1386913 D similar to Salmonella typhi CT18 hydrolase; hydrolase 1385129..1386913 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142057.1 CDS SSPA1218 NC_011147.1 1386910 1389438 D similar to Salmonella typhi CT18 hydrolase; hydrolase 1386910..1389438 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142058.1 CDS SSPA1219 NC_011147.1 1389495 1391570 D glycogen debranching protein-like protein 1389495..1391570 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142059.1 CDS SSPA1220 NC_011147.1 1391684 1392886 R similar to Salmonella typhi CT18 aminotransferase; aminotransferase complement(1391684..1392886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142060.1 CDS SSPA1221 NC_011147.1 1395375 1396268 R hypothetical protein complement(1395375..1396268) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142061.1 CDS SSPA1222 NC_011147.1 1396461 1396691 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1396461..1396691) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142062.1 CDS SSPA1223 NC_011147.1 1397184 1398287 D similar to Salmonella typhi Ty2 uptake hydrogenase small subunit; uptake hydrogenase small subunit 1397184..1398287 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142063.1 CDS SSPA1224 NC_011147.1 1398290 1400092 D similar to Escherichia coli K12 hydrogenase-1 large subunit; hydrogenase-1 large subunit 1398290..1400092 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142064.1 CDS SSPA1225 NC_011147.1 1400043 1400786 D similar to Salmonella typhi Ty2 Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2; Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC2 1400043..1400786 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142065.1 CDS SSPA1226 NC_011147.1 1400792 1401400 D similar to Salmonella typhi Ty2 hydrogenase 1 maturation protease; hydrogenase 1 maturation protease 1400792..1401400 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142066.1 CDS SSPA1227 NC_011147.1 1401703 1402113 D similar to Salmonella typhi Ty2 hydrogenase-1 operon protein HyaE2; hydrogenase-1 operon protein HyaE2 1401703..1402113 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142067.1 CDS SSPA1228 NC_011147.1 1402131 1403192 D similar to Salmonella typhi Ty2 hydrogenase-1 operon protein HyaF2; hydrogenase-1 operon protein HyaF2 1402131..1403192 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142068.1 CDS SSPA1229 NC_011147.1 1403180 1404067 D similar to Salmonella typhi CT18 ATP/GTP-binding protein; ATP/GTP-binding protein 1403180..1404067 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142069.1 CDS SSPA1230 NC_011147.1 1404080 1404421 D similar to Salmonella typhimurium hydrogenase; hydrogenase 1404080..1404421 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142070.2 CDS SSPA1231 NC_011147.1 1404562 1405680 R similar to Salmonella typhimurium outer membrane protein; outer membrane protein complement(1404562..1405680) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142071.1 CDS SSPA1232 NC_011147.1 1406397 1406939 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1406397..1406939 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142072.1 CDS SSPA1233 NC_011147.1 1406995 1407942 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1406995..1407942) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142073.1 CDS SSPA1234 NC_011147.1 1408159 1408518 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1408159..1408518) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142074.1 CDS SSPA1235 NC_011147.1 1408518 1409432 R catalyzes the formation of glutamate from glutamine; glutaminase complement(1408518..1409432) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142075.1 CDS SSPA1236 NC_011147.1 1409517 1410905 R in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; succinate semialdehyde dehydrogenase complement(1409517..1410905) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142076.1 CDS SSPA1237 NC_011147.1 1411008 1411880 D similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1411008..1411880 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142077.1 CDS SSPA1238 NC_011147.1 1411996 1413186 D similar to Salmonella typhi CT18 membrane transport protein; sugar efflux transporter 1411996..1413186 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142078.1 CDS SSPA1239 NC_011147.1 1413233 1413898 R 'protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function'; multiple drug resistance protein MarC complement(1413233..1413898) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142079.1 CDS SSPA1240 NC_011147.1 1414157 1414591 D Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes; DNA-binding transcriptional repressor MarR 1414157..1414591 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142080.1 CDS SSPA1241 NC_011147.1 1414560 1414994 D 'transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF'; DNA-binding transcriptional activator MarA 1414560..1414994 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142083.1 CDS SSPA1244 NC_011147.1 1415803 1415925 D hypothetical protein 1415803..1415925 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142084.1 CDS SSPA1245 NC_011147.1 1416274 1416666 R similar to Salmonella typhi CT18 periplasmic protein; hypothetical protein complement(1416274..1416666) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142085.1 CDS SSPA1246 NC_011147.1 1417093 1417620 D similar to Salmonella typhi CT18 conserved hypothetical protein; competence damage-inducible protein A 1417093..1417620 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142086.1 CDS SSPA1247 NC_011147.1 1417740 1417922 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1417740..1417922) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142087.1 CDS SSPA1248 NC_011147.1 1418267 1420309 R similar to Salmonella typhi CT18 dipeptidyl carboxypeptidase II; dipeptidyl carboxypeptidase II complement(1418267..1420309) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142088.1 CDS SSPA1249 NC_011147.1 1420448 1421194 D 'NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine'; 3-hydroxy acid dehydrogenase 1420448..1421194 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142089.1 CDS SSPA1250 NC_011147.1 1421323 1422009 D similar to Salmonella typhi CT18 regulatory protein; regulatory protein 1421323..1422009 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142090.1 CDS SSPA1251 NC_011147.1 1422190 1422393 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1422190..1422393 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142091.1 CDS SSPA1252 NC_011147.1 1422460 1423926 R similar to Salmonella typhimurium mannitol dehydrogenase; mannitol dehydrogenase complement(1422460..1423926) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142092.1 CDS SSPA1253 NC_011147.1 1424070 1425449 R similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein complement(1424070..1425449) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142093.1 CDS SSPA1254 NC_011147.1 1425503 1426522 R similar to Salmonella typhimurium dehydrogenase; dehydrogenase complement(1425503..1426522) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142094.1 CDS SSPA1255 NC_011147.1 1426533 1427747 R similar to Salmonella typhi CT18 starvation sensing protein RspA; starvation sensing protein RspA complement(1426533..1427747) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142095.1 CDS SSPA1256 NC_011147.1 1427869 1428195 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1427869..1428195) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142096.1 CDS SSPA1257 NC_011147.1 1428348 1428689 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1428348..1428689 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142097.1 CDS SSPA1258 NC_011147.1 1428725 1429285 D similar to Salmonella typhi CT18 spermidine N1-acetyltransferase; spermidine N1-acetyltransferase 1428725..1429285 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142098.1 CDS SSPA1259 NC_011147.1 1429326 1430045 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1429326..1430045) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142099.1 CDS SSPA1260 NC_011147.1 1430140 1430448 D hypothetical protein 1430140..1430448 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142100.1 CDS SSPA1261 NC_011147.1 1430605 1433043 D anaerobic dimethyl sulfoxide reductase subunit A 1430605..1433043 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142101.1 CDS SSPA1262 NC_011147.1 1433054 1433671 D similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain B; anaerobic dimethyl sulfoxide reductase subunit B 1433054..1433671 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142102.1 CDS SSPA1263 NC_011147.1 1433673 1434530 D similar to Salmonella typhi CT18 dimethyl sulphoxide reductase subunit; dimethyl sulfoxide reductase subunit 1433673..1434530 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142103.1 CDS SSPA1264 NC_011147.1 1434573 1435187 D 'binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane'; twin-argninine leader-binding protein DmsD 1434573..1435187 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142104.1 CDS SSPA1265 NC_011147.1 1435492 1436202 D similar to Salmonella typhi CT18 ABC transporter membrane protein; ABC transporter membrane protein 1435492..1436202 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142105.1 CDS SSPA1266 NC_011147.1 1436231 1437133 D similar to Salmonella typhi CT18 ABC transporter periplasmic binding protein; ABC transporter substrate-binding protein 1436231..1437133 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142106.1 CDS SSPA1267 NC_011147.1 1437143 1437790 D similar to Salmonella typhi CT18 ABC transporter membrane protein; ABC transporter membrane protein 1437143..1437790 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142107.1 CDS SSPA1268 NC_011147.1 1437790 1438938 D similar to Salmonella typhi CT18 ABC transporter ATP/GTP-binding protein; ABC transporter ATP/GTP-binding protein 1437790..1438938 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142108.1 CDS SSPA1269 NC_011147.1 1440315 1441010 R 'DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium'; dithiobiotin synthetase complement(1440315..1441010) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142109.1 CDS SSPA1270 NC_011147.1 1441136 1442356 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1441136..1442356) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142110.1 CDS SSPA1271 NC_011147.1 1442484 1443383 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1442484..1443383) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142111.1 CDS SSPA1272 NC_011147.1 1443503 1444756 D similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein 1443503..1444756 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142112.1 CDS SSPA1273 NC_011147.1 1445671 1446492 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1445671..1446492 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142113.1 CDS SSPA1274 NC_011147.1 1446846 1447208 R 'with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS'; multidrug efflux system protein MdtJ complement(1446846..1447208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142114.1 CDS SSPA1275 NC_011147.1 1447320 1447490 R hypothetical protein complement(1447320..1447490) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142115.1 CDS tqsA NC_011147.1 1447625 1448659 D transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; transporter 1447625..1448659 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142116.2 CDS SSPA1277 NC_011147.1 1448834 1450222 R similar to Salmonella typhi CT18 pyridine nucleotide transhydrogenase subunit-beta; pyridine nucleotide transhydrogenase subunit-beta complement(1448834..1450222) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142117.1 CDS pntA NC_011147.1 1450233 1451762 R forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha complement(1450233..1451762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142118.1 CDS SSPA1279 NC_011147.1 1452289 1453233 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1452289..1453233 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142119.1 CDS SSPA1280 NC_011147.1 1453532 1454914 D similar to Salmonella typhi CT18 amino acid permease; amino acid permease 1453532..1454914 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142120.1 CDS SSPA1281 NC_011147.1 1454976 1455350 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1454976..1455350) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142121.1 CDS SSPA1282 NC_011147.1 1455437 1456168 D response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 1455437..1456168 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142122.1 CDS SSPA1283 NC_011147.1 1456647 1457798 D similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 1456647..1457798 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142123.1 CDS SSPA1284 NC_011147.1 1457952 1459658 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1457952..1459658 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142124.1 CDS SSPA1285 NC_011147.1 1459766 1461070 D similar to Salmonella typhi CT18 two component sensor kinase; sensor protein RstB 1459766..1461070 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142125.1 CDS SSPA1286 NC_011147.1 1461146 1462075 D binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 1461146..1462075 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142126.1 CDS fumC NC_011147.1 1462072 1463475 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(1462072..1463475) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142127.1 CDS SSPA1288 NC_011147.1 1463643 1465289 R 'similar to Salmonella typhi CT18 Fumarate hydratase class I, aerobic'; fumarate hydratase complement(1463643..1465289) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142128.1 CDS SSPA1289 NC_011147.1 1465489 1466664 D similar to Salmonella typhi CT18 mannose-6-phosphate isomerase; mannose-6-phosphate isomerase 1465489..1466664 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142129.1 CDS SSPA1290 NC_011147.1 1466767 1468275 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1466767..1468275 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142130.1 CDS SSPA1291 NC_011147.1 1470056 1471168 R similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase complement(1470056..1471168) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142131.1 CDS SSPA1292 NC_011147.1 1471728 1471943 D 'YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes'; oriC-binding nucleoid-associated protein 1471728..1471943 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142132.1 CDS SSPA1293 NC_011147.1 1472032 1472472 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1472032..1472472 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142133.1 CDS SSPA1294 NC_011147.1 1472549 1473130 D similar to Salmonella typhi CT18 membrane protein; Na(+)-translocating NADH-quinone reductase subunit E 1472549..1473130 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142134.1 CDS SSPA1295 NC_011147.1 1473130 1473708 D part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 1473130..1473708 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142135.1 CDS SSPA1296 NC_011147.1 1473701 1475908 D part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 1473701..1475908 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142136.1 CDS rnfD NC_011147.1 1475909 1476967 D RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 1475909..1476967 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142137.1 CDS SSPA1298 NC_011147.1 1476971 1477591 D part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 1476971..1477591 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142138.1 CDS SSPA1299 NC_011147.1 1477594 1478286 D in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 1477594..1478286 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142139.1 CDS SSPA1300 NC_011147.1 1478286 1478921 D 'DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines'; endonuclease III 1478286..1478921 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142140.1 CDS tppB NC_011147.1 1479523 1481028 D mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease 1479523..1481028 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142141.1 CDS SSPA1302 NC_011147.1 1481133 1481738 D similar to Salmonella typhi CT18 glutathione S-transferase; glutathionine S-transferase 1481133..1481738 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142142.1 CDS SSPA1303 NC_011147.1 1481797 1482657 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase complement(1481797..1482657) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142143.1 CDS SSPA1304 NC_011147.1 1482717 1483991 R catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase complement(1482717..1483991) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142144.1 CDS SSPA1305 NC_011147.1 1484118 1484774 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(1484118..1484774) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142145.1 CDS SSPA1306 NC_011147.1 1484833 1485162 R MliC; membrane-bound lysozyme inhibitor of c-type lysozyme; lysozyme inhibitor complement(1484833..1485162) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142146.1 CDS anmK NC_011147.1 1485250 1486371 R 'catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling'; anhydro-N-acetylmuramic acid kinase complement(1485250..1486371) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142147.1 CDS SSPA1308 NC_011147.1 1486643 1487110 D similar to Salmonella typhi CT18 outer membrane lipoprotein SlyB precursor; outer membrane lipoprotein SlyB 1486643..1487110 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142148.1 CDS SSPA1309 NC_011147.1 1487158 1487592 R Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA complement(1487158..1487592) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142149.1 CDS SSPA1310 NC_011147.1 1487793 1488029 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1487793..1488029 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142150.1 CDS SSPA1311 NC_011147.1 1487996 1488892 D similar to Salmonella typhi CT18 HlyD-family protein; HlyD family protein 1487996..1488892 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142151.1 CDS SSPA1312 NC_011147.1 1488892 1490931 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1488892..1490931 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142152.1 CDS SSPA1313 NC_011147.1 1490907 1491428 R SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water; superoxide dismutase complement(1490907..1491428) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142153.1 CDS SSPA1314 NC_011147.1 1491508 1492404 R similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase complement(1491508..1492404) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142154.1 CDS SSPA1315 NC_011147.1 1492455 1492694 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1492455..1492694) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142155.1 CDS SSPA1316 NC_011147.1 1492797 1493396 D similar to Salmonella typhi CT18 TetR-family transcriptional regulator; TetR family regulatory protein 1492797..1493396 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142156.1 CDS SSPA1317 NC_011147.1 1493455 1494552 D FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; N-ethylmaleimide reductase 1493455..1494552 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142157.1 CDS SSPA1318 NC_011147.1 1494621 1495028 D Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; glyoxalase I 1494621..1495028 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142158.1 CDS SSPA1319 NC_011147.1 1495129 1495776 D Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 1495129..1495776 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142159.1 CDS SSPA1320 NC_011147.1 1495854 1496201 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1495854..1496201) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142160.1 CDS SSPA1321 NC_011147.1 1496504 1497358 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1496504..1497358 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142161.1 CDS SSPA1322 NC_011147.1 1497485 1498066 D SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; superoxide dismutase 1497485..1498066 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142162.1 CDS SSPA1323 NC_011147.1 1498534 1499559 D 'binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers'; DNA-binding transcriptional repressor PurR 1498534..1499559 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142163.1 CDS SSPA1324 NC_011147.1 1499556 1500488 R similar to Salmonella typhi CT18 transcriptional regulator; DNA-binding transcriptional regulator complement(1499556..1500488) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142164.1 CDS SSPA1325 NC_011147.1 1500601 1501806 D uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 1500601..1501806 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142165.2 CDS SSPA1326 NC_011147.1 1502096 1503244 D catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 1502096..1503244 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142166.1 CDS SSPA1327 NC_011147.1 1503286 1503927 R 'catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine'; riboflavin synthase subunit alpha complement(1503286..1503927) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142167.1 CDS SSPA1328 NC_011147.1 1504144 1505517 D NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 1504144..1505517 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142168.1 CDS SSPA1329 NC_011147.1 1505990 1507048 R 'member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli'; secretion system apparatus protein SsaU complement(1505990..1507048) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142169.1 CDS SSPA1330 NC_011147.1 1507045 1507824 R similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein complement(1507045..1507824) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142170.1 CDS SSPA1331 NC_011147.1 1507825 1508091 R similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein complement(1507825..1508091) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142171.1 CDS SSPA1332 NC_011147.1 1508088 1508735 R part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein complement(1508088..1508735) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142172.1 CDS SSPA1333 NC_011147.1 1508803 1509771 R similar to Salmonella typhi CT18 type III secretion protein; type III secretion system protein complement(1508803..1509771) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142173.1 CDS SSPA1334 NC_011147.1 1509752 1510126 R similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein complement(1509752..1510126) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142174.1 CDS SSPA1335 NC_011147.1 1510107 1510484 R similar to Salmonella typhi CT18 type III secretion protein; type III secretion protein complement(1510107..1510484) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142175.1 CDS SSPA1336 NC_011147.1 1510487 1511788 R similar to Salmonella typhi CT18 type III secretion ATP synthase; type III secretion system ATPase complement(1510487..1511788) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142176.1 CDS SSPA1337 NC_011147.1 1511778 1513823 R with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system; secretion system apparatus protein SsaV complement(1511778..1513823) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142177.1 CDS SSPA1338 NC_011147.1 1513808 1514176 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1513808..1514176) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142178.1 CDS SSPA1339 NC_011147.1 1514234 1515226 R similar to Salmonella typhi CT18 secretion system protein; secretion system protein complement(1514234..1515226) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142179.1 CDS SSPA1340 NC_011147.1 1515216 1515890 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1515216..1515890) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142180.1 CDS SSPA1341 NC_011147.1 1515887 1516435 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1515887..1516435) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142181.1 CDS SSPA1342 NC_011147.1 1516453 1517202 R similar to Salmonella typhi CT18 pathogenicity island lipoprotein; pathogenicity island lipoprotein complement(1516453..1517202) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142182.1 CDS SSPA1343 NC_011147.1 1517199 1517447 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1517199..1517447) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142183.1 CDS SSPA1344 NC_011147.1 1517459 1517686 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1517459..1517686) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142184.1 CDS SSPA1345 NC_011147.1 1517727 1517942 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1517727..1517942) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142185.1 CDS SSPA1346 NC_011147.1 1518036 1518725 R similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein complement(1518036..1518725) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142186.1 CDS SSPA1347 NC_011147.1 1518722 1519504 R similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein complement(1518722..1519504) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142187.1 CDS SSPA1348 NC_011147.1 1519520 1519948 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1519520..1519948) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142188.1 CDS SSPA1349 NC_011147.1 1520006 1520422 R similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein complement(1520006..1520422) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142189.1 CDS SSPA1350 NC_011147.1 1520425 1521012 R similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein complement(1520425..1521012) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142190.1 CDS SSPA1351 NC_011147.1 1521028 1522482 R similar to Salmonella typhi CT18 pathogenicity island effector protein; pathogenicity island effector protein complement(1521028..1522482) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142191.1 CDS SSPA1352 NC_011147.1 1522485 1522958 R similar to Salmonella typhi CT18 Type III secretion system chaperone protein; type III secretion system chaperone protein complement(1522485..1522958) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142192.1 CDS SSPA1353 NC_011147.1 1522955 1523545 R similar to Salmonella typhi CT18 pathogenicity island effector effector protein; pathogenicity island effector protein complement(1522955..1523545) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142193.1 CDS SSPA1354 NC_011147.1 1523552 1523878 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1523552..1523878) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142194.1 CDS SSPA1355 NC_011147.1 1524141 1524383 R similar to Salmonella typhi CT18 secretion system protein; secretion system protein complement(1524141..1524383) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142195.1 CDS SSPA1356 NC_011147.1 1524391 1525602 R similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein complement(1524391..1525602) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142196.1 CDS SSPA1357 NC_011147.1 1525583 1527076 R similar to Salmonella typhi Ty2 outer membrane secretory protein; outer membrane secretory protein complement(1525583..1527076) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142197.1 CDS SSPA1358 NC_011147.1 1527078 1527479 R similar to Salmonella typhi Ty2 pathogenicity island secreted effector protein; pathogenicity island secreted effector protein complement(1527078..1527479) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142198.1 CDS SSPA1359 NC_011147.1 1527880 1530642 D similar to Salmonella typhi CT18 two-component sensor kinase; two-component sensor kinase 1527880..1530642 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142199.1 CDS SSPA1360 NC_011147.1 1530673 1531311 D similar to Salmonella typhi CT18 two-component response regulator; two-component response regulator 1530673..1531311 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142200.1 CDS SSPA1361 NC_011147.1 1531490 1532218 D orf242; similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1531490..1532218 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142201.1 CDS SSPA1362 NC_011147.1 1532390 1533349 D orf319; similar to Salmonella typhi CT18 pathogenicity island protein; pathogenicity island protein 1532390..1533349 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142202.1 CDS SSPA1363 NC_011147.1 1533445 1533657 R similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein complement(1533445..1533657) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142203.1 CDS SSPA1364 NC_011147.1 1533755 1534375 R similar to Salmonella typhi CT18 two-component response regulator; two-component response regulator complement(1533755..1534375) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142204.2 CDS SSPA1365 NC_011147.1 1534350 1536128 R similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein complement(1534350..1536128) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142205.1 CDS SSPA1366 NC_011147.1 1537046 1538068 D similar to Salmonella typhi CT18 tetrathionate reductase subunit C (membrane protein); tetrathionate reductase subunit C 1537046..1538068 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142206.1 CDS SSPA1367 NC_011147.1 1538061 1541123 D similar to Salmonella typhi CT18 tetrathionate reductase subunit A; tetrathionate reductase subunit A 1538061..1541123 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142207.1 CDS SSPA1368 NC_011147.1 1542684 1543466 D orf245; similar to Salmonella typhi CT18 Orf 245 protein; hypothetical protein 1542684..1543466 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142208.1 CDS SSPA1369 NC_011147.1 1543479 1544372 D orf32; similar to Salmonella typhimurium hydrolase or acyltransferase; hydrolase/acyltransferase 1543479..1544372 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142209.1 CDS SSPA1370 NC_011147.1 1544394 1545737 D orf48; similar to Salmonella typhi CT18 amino acid permease; amino acid permease 1544394..1545737 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142210.1 CDS SSPA1371 NC_011147.1 1546193 1547551 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1546193..1547551 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142211.1 CDS SSPA1372 NC_011147.1 1547862 1548098 D similar to Salmonella typhi Ty2 major outer membrane lipoprotein; major outer membrane lipoprotein 1547862..1548098 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142212.1 CDS SSPA1373 NC_011147.1 1548180 1548419 D similar to Salmonella typhi CT18 major outer membrane lipoprotein; major outer membrane lipoprotein 1548180..1548419 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142213.1 CDS SSPA1374 NC_011147.1 1548497 1548736 D similar to Salmonella typhi CT18 major outer membrane lipoprotein; major outer membrane lipoprotein 1548497..1548736 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142214.1 CDS SSPA1375 NC_011147.1 1548802 1549803 R similar to Salmonella typhimurium LysM domain; LysM domain complement(1548802..1549803) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142215.1 CDS SSPA1376 NC_011147.1 1549958 1550374 R Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE complement(1549958..1550374) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142216.1 CDS sufC NC_011147.1 1552849 1553595 R part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase ATPase complement(1552849..1553595) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142217.1 CDS SSPA1378 NC_011147.1 1553612 1555099 R with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB complement(1553612..1555099) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142218.1 CDS sufA NC_011147.1 1555108 1555476 R functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein complement(1555108..1555476) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142219.1 CDS SSPA1380 NC_011147.1 1555903 1557249 D similar to Salmonella typhi CT18 transporter; transporter 1555903..1557249 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142220.1 CDS SSPA1381 NC_011147.1 1557537 1557764 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1557537..1557764) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142221.1 CDS SSPA1382 NC_011147.1 1557824 1558177 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1557824..1558177) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142222.1 CDS SSPA1383 NC_011147.1 1558231 1561287 R similar to Salmonella typhi CT18 conserved hypothetical FAD-binding protein; hypothetical protein complement(1558231..1561287) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142223.1 CDS SSPA1384 NC_011147.1 1561552 1562670 D 'YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function'; inner membrane protein 1561552..1562670 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142224.1 CDS aroD NC_011147.1 1563064 1563780 D catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis; 3-dehydroquinate dehydratase 1563064..1563780 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142225.1 CDS SSPA1386 NC_011147.1 1563880 1566258 R catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase complement(1563880..1566258) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142226.1 CDS SSPA1387 NC_011147.1 1566587 1567420 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1566587..1567420 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142227.1 CDS SSPA1388 NC_011147.1 1567576 1568622 D tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 1567576..1568622 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142228.1 CDS SSPA1389 NC_011147.1 1568779 1568970 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1568779..1568970 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142229.1 CDS SSPA1390 NC_011147.1 1569006 1570448 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1569006..1570448) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142230.1 CDS SSPA1391 NC_011147.1 1570510 1571223 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1570510..1571223) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142231.1 CDS SSPA1392 NC_011147.1 1571537 1572001 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(1571537..1572001) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142232.1 CDS SSPA1393 NC_011147.1 1572078 1572827 R ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase complement(1572078..1572827) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142233.1 CDS btuE NC_011147.1 1572827 1573378 R similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase complement(1572827..1573378) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142234.1 CDS SSPA1395 NC_011147.1 1573470 1574450 R with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease complement(1573470..1574450) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142235.1 CDS ihfA NC_011147.1 1574653 1574952 R 'This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control'; integration host factor subunit alpha complement(1574653..1574952) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142236.1 CDS pheT NC_011147.1 1574957 1577344 R 'catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily'; phenylalanyl-tRNA synthetase subunit beta complement(1574957..1577344) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142237.1 CDS pheS NC_011147.1 1577360 1578343 R 'catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily'; phenylalanyl-tRNA synthetase subunit alpha complement(1577360..1578343) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142238.1 CDS rplT NC_011147.1 1578645 1579001 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1578645..1579001) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142239.1 CDS SSPA1400 NC_011147.1 1579121 1579291 D 50S ribosomal protein A 1579121..1579291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142240.1 CDS infC NC_011147.1 1579345 1579779 R IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 complement(1579345..1579779) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142241.1 CDS SSPA1402 NC_011147.1 1579891 1581819 R 'catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; threonyl-tRNA synthetase complement(1579891..1581819) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142242.1 CDS SSPA1403 NC_011147.1 1582711 1583934 D similar to Salmonella typhi CT18 O-antigen polymerase; O-antigen polymerase 1582711..1583934 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142243.1 CDS SSPA1404 NC_011147.1 1584257 1584463 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1584257..1584463) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142244.1 CDS SSPA1405 NC_011147.1 1584636 1585490 R similar to Salmonella typhimurium DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease complement(1584636..1585490) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142245.1 CDS SSPA1406 NC_011147.1 1585487 1585801 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1585487..1585801) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142246.1 CDS SSPA1407 NC_011147.1 1585971 1586903 D similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 1585971..1586903 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142247.1 CDS SSPA1408 NC_011147.1 1586952 1587710 R similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein complement(1586952..1587710) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142248.1 CDS SSPA1409 NC_011147.1 1587999 1588931 D similar to Salmonella typhi CT18 6-phosphofructokinase isozyme; 6-phosphofructokinase 1587999..1588931 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142249.1 CDS SSPA1410 NC_011147.1 1589028 1589318 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1589028..1589318 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142250.1 CDS SSPA1411 NC_011147.1 1589425 1590285 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1589425..1590285 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142251.1 CDS SSPA1412 NC_011147.1 1590328 1590864 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1590328..1590864) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142252.1 CDS SSPA1413 NC_011147.1 1591013 1591681 D 'YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate'; 2-deoxyglucose-6-phosphatase 1591013..1591681 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142253.1 CDS SSPA1414 NC_011147.1 1591831 1592418 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1591831..1592418 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142254.1 CDS SSPA1415 NC_011147.1 1592555 1593946 D similar to Salmonella typhi CT18 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1592555..1593946 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142255.1 CDS SSPA1416 NC_011147.1 1594049 1594291 R similar to Salmonella typhi CT18 cell division activator CedA; cell division modulator complement(1594049..1594291) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142256.1 CDS katE NC_011147.1 1594656 1596908 D Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; hydroperoxidase II 1594656..1596908 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142257.1 CDS SSPA1418 NC_011147.1 1596952 1597710 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1596952..1597710) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142258.1 CDS SSPA1419 NC_011147.1 1597723 1599078 R similar to Salmonella typhi CT18 phospho-beta-glucosidase B; phospho-beta-glucosidase B complement(1597723..1599078) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142259.2 CDS SSPA1420 NC_011147.1 1599203 1600045 R represses the celABCDF-ydjC operon involved in carbon uptake; DNA-binding transcriptional regulator ChbR complement(1599203..1600045) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142260.1 CDS SSPA1421 NC_011147.1 1600055 1600402 R 'catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake'; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA complement(1600055..1600402) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142261.1 CDS SSPA1422 NC_011147.1 1600453 1601811 R 'catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake'; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC complement(1600453..1601811) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142262.1 CDS SSPA1423 NC_011147.1 1601894 1602214 R 'catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake'; PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB complement(1601894..1602214) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142263.1 CDS SSPA1424 NC_011147.1 1602515 1602856 R osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE complement(1602515..1602856) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142264.1 CDS nadE NC_011147.1 1603075 1603902 D catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1603075..1603902 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142265.1 CDS SSPA1426 NC_011147.1 1604023 1604904 D 3' incision activity; acts with UvrC; nucleotide excision repair endonuclease 1604023..1604904 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142266.1 CDS SSPA1427 NC_011147.1 1604979 1605464 R periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; hypothetical protein complement(1604979..1605464) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142267.1 CDS SSPA1428 NC_011147.1 1605800 1606768 R catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase complement(1605800..1606768) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142268.1 CDS SSPA1429 NC_011147.1 1606761 1608104 R 'catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation'; succinylarginine dihydrolase complement(1606761..1608104) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142269.1 CDS astD NC_011147.1 1608101 1609579 R a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase complement(1608101..1609579) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142270.1 CDS SSPA1431 NC_011147.1 1609576 1610610 R similar to Salmonella typhimurium arginine succinyltransferase; arginine succinyltransferase complement(1609576..1610610) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142271.1 CDS SSPA1432 NC_011147.1 1610601 1611827 R catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; bifunctional succinylornithine transaminase/acetylornithine transaminase complement(1610601..1611827) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142272.1 CDS SSPA1433 NC_011147.1 1612273 1613079 D removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 1612273..1613079 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142273.1 CDS SSPA1434 NC_011147.1 1613152 1613568 D similar to Salmonella typhi CT18 MutT-family protein; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1613152..1613568 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142274.1 CDS SSPA1435 NC_011147.1 1613528 1613803 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(1613528..1613803) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142275.1 CDS SSPA1436 NC_011147.1 1614042 1615385 D converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1614042..1615385 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142276.1 CDS SSPA1437 NC_011147.1 1615415 1617364 R decatenates replicating daughter chromosomes; DNA topoisomerase III complement(1615415..1617364) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142277.1 CDS SSPA1438 NC_011147.1 1617369 1618412 R catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase complement(1617369..1618412) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142278.1 CDS SSPA1439 NC_011147.1 1618530 1619081 R similar to Salmonella typhi CT18 nitroreductase; hypothetical protein complement(1618530..1619081) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142279.1 CDS SSPA1440 NC_011147.1 1619255 1621111 D SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 1619255..1621111 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142280.1 CDS ansA NC_011147.1 1621207 1622223 D converts asparagine to aspartate and ammonia; asparaginase 1621207..1622223 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142281.1 CDS SSPA1442 NC_011147.1 1622250 1622906 D catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 1622250..1622906 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142282.1 CDS SSPA1443 NC_011147.1 1623257 1623535 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1623257..1623535) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142283.1 CDS SSPA1444 NC_011147.1 1623577 1624005 R this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B complement(1623577..1624005) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142284.1 CDS SSPA1445 NC_011147.1 1624332 1625327 D similar to Salmonella typhi CT18 glyceraldehyde 3-phosphate dehydrogenase A; glyceraldehyde 3-phosphate dehydrogenase A 1624332..1625327 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142285.1 CDS SSPA1446 NC_011147.1 1625656 1626540 D similar to Salmonella typhimurium enzymes related to aldose 1-epimerase; hypothetical protein 1625656..1626540 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142286.1 CDS SSPA1448 NC_011147.1 1627593 1628789 R similar to Salmonella typhimurium arylsulfatase regulator; arylsulfatase regulator complement(1627593..1628789) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142287.1 CDS SSPA1449 NC_011147.1 1629079 1629825 R similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein complement(1629079..1629825) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142288.1 CDS SSPA1449a NC_011147.1 1630251 1632185 D Pseudogene in Paratyphi A strain ATCC9150 (SPA1559); hypothetical protein 1630251..1632185 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142289.1 CDS SSPA1450 NC_011147.1 1632308 1633594 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1632308..1633594 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142290.1 CDS SSPA1451 NC_011147.1 1634265 1635758 D similar to Salmonella typhimurium Methyl-accepting chemotaxis protein; Diguanylate cyclase/phosphodiesterase domain 1; hypothetical protein 1634265..1635758 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142291.1 CDS SSPA1452 NC_011147.1 1635799 1636326 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1635799..1636326 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142292.1 CDS SSPA1453 NC_011147.1 1636636 1637082 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1636636..1637082 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142293.1 CDS SSPA1454 NC_011147.1 1637062 1637856 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(1637062..1637856) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142294.1 CDS SSPA1455 NC_011147.1 1637957 1639141 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1637957..1639141 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142295.1 CDS SSPA1456 NC_011147.1 1639260 1639607 D similar to Salmonella typhi CT18 bacteriophage protein; bacteriophage protein 1639260..1639607 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142296.1 CDS SSPA1457 NC_011147.1 1639593 1639904 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1639593..1639904) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142297.1 CDS SSPA1458 NC_011147.1 1639973 1640224 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1639973..1640224) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142298.1 CDS SSPA1459 NC_011147.1 1640657 1640905 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1640657..1640905) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142299.1 CDS SSPA1460 NC_011147.1 1640913 1641098 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1640913..1641098) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142300.1 CDS SSPA1461 NC_011147.1 1641219 1641860 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1641219..1641860) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142301.1 CDS SSPA1462 NC_011147.1 1642090 1642272 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1642090..1642272) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142302.1 CDS SSPA1463 NC_011147.1 1642275 1642637 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1642275..1642637) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142303.1 CDS SSPA1464 NC_011147.1 1642811 1643449 R similar to Salmonella typhi CT18 membrane transport protein; leucine export protein LeuE complement(1642811..1643449) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142304.1 CDS SSPA1465 NC_011147.1 1643646 1644191 R catalyzes the interconversion of chorismate to prephenate; chorismate mutase complement(1643646..1644191) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142305.1 CDS SSPA1466 NC_011147.1 1644274 1644429 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1644274..1644429 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142306.1 CDS SSPA1467 NC_011147.1 1644508 1644756 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1644508..1644756 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142307.1 CDS SSPA1468 NC_011147.1 1645011 1645859 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(1645011..1645859) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142308.1 CDS SSPA1469 NC_011147.1 1645928 1646521 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1645928..1646521) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142309.1 CDS SSPA1470 NC_011147.1 1646666 1647454 R streptomycin 3'-adenyltransferase; aminoglycoside resistance protein complement(1646666..1647454) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142310.1 CDS SSPA1471 NC_011147.1 1647563 1648213 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1647563..1648213) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142311.1 CDS SSPA1472 NC_011147.1 1648407 1648733 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1648407..1648733) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142312.1 CDS SSPA1473 NC_011147.1 1648927 1650060 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1648927..1650060 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142313.1 CDS SSPA1474 NC_011147.1 1650142 1650732 R similar to Salmonella typhi CT18 ABC transport ATP-binding subunit; ABC transporter ATP-binding protein complement(1650142..1650732) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142314.1 CDS SSPA1475 NC_011147.1 1650726 1651523 R similar to Salmonella typhi CT18 ABC transport ATP-binding protein; ABC transporter ATP-binding protein complement(1650726..1651523) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142315.1 CDS SSPA1476 NC_011147.1 1651517 1652329 R similar to Salmonella typhi CT18 inner membrane transport protein; inner membrane transport protein complement(1651517..1652329) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142316.1 CDS SSPA1477 NC_011147.1 1652319 1653296 R similar to Salmonella typhi CT18 inner membrane transport protein; inner membrane transport protein complement(1652319..1653296) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142317.1 CDS SSPA1478 NC_011147.1 1653293 1654927 R similar to Salmonella typhi CT18 substrate-binding transport protein; substrate-binding transport protein complement(1653293..1654927) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142318.1 CDS SSPA1479 NC_011147.1 1655609 1655923 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1655609..1655923 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142319.1 CDS SSPA1480 NC_011147.1 1656072 1656602 D similar to Salmonella typhi CT18 cytochrome; cytochrome 1656072..1656602 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142320.1 CDS SSPA1481 NC_011147.1 1656684 1657601 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1656684..1657601) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142321.1 CDS SSPA1482 NC_011147.1 1658134 1658307 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1658134..1658307) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142322.2 CDS SSPA1483 NC_011147.1 1659026 1659583 R similar to Salmonella typhi CT18 outer membrane invasion protein; outer membrane invasion protein complement(1659026..1659583) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142323.1 CDS SSPA1484 NC_011147.1 1659961 1660089 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1659961..1660089) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142324.1 CDS SSPA1485 NC_011147.1 1660175 1660339 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1660175..1660339) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142325.1 CDS SSPA1486 NC_011147.1 1660388 1660651 D similar to Salmonella typhi CT18 outer membrane virulence protein; outer membrane virulence protein 1660388..1660651 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142326.1 CDS SSPA1487 NC_011147.1 1660783 1660995 D similar to Salmonella typhi CT18 cold shock protein; cold shock protein 1660783..1660995 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142327.1 CDS SSPA1488 NC_011147.1 1661397 1661918 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 1661397..1661918 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142328.1 CDS SSPA1489 NC_011147.1 1662099 1662338 D similar to Salmonella typhi CT18 virulence protein; virulence protein 1662099..1662338 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142329.1 CDS SSPA1490 NC_011147.1 1663212 1664021 D similar to Salmonella typhi Ty2 toxin-like protein; toxin-like protein 1663212..1664021 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142330.1 CDS SSPA1491 NC_011147.1 1664094 1664471 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1664094..1664471 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142331.1 CDS SSPA1492 NC_011147.1 1664619 1665161 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1664619..1665161) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142332.1 CDS SSPA1493 NC_011147.1 1665353 1666081 R similar to Salmonella typhi CT18 pertussis-like toxin subunit; pertussis-like toxin subunit complement(1665353..1666081) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142333.1 CDS SSPA1494 NC_011147.1 1666098 1666511 R similar to Salmonella typhi CT18 pertussis-like toxin subunit; pertussis-like toxin subunit complement(1666098..1666511) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142334.1 CDS SSPA1495 NC_011147.1 1667154 1667426 D hypothetical protein 1667154..1667426 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142335.1 CDS SSPA1496 NC_011147.1 1667458 1668582 R similar to Salmonella typhi CT18 bacteriophage protein; bacteriophage protein complement(1667458..1668582) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142336.1 CDS SSPA1497 NC_011147.1 1669041 1670291 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(1669041..1670291) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142337.1 CDS SSPA1498 NC_011147.1 1670463 1671128 D similar to Salmonella typhi Ty2 ribosomal large subunit pseudouridine synthase B; ribosomal large subunit pseudouridine synthase B 1670463..1671128 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142338.1 CDS SSPA1499 NC_011147.1 1671125 1671454 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1671125..1671454 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142339.1 CDS SSPA1500 NC_011147.1 1671466 1671927 D similar to Salmonella typhi Ty2 MutT-family protein; MutT-family protein 1671466..1671927 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142340.1 CDS mnmA NC_011147.1 1671981 1673087 D catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1671981..1673087 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142341.1 CDS SSPA1502 NC_011147.1 1673174 1673815 D HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 1673174..1673815 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142342.1 CDS SSPA1503 NC_011147.1 1673819 1675189 D Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1673819..1675189 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142343.1 CDS SSPA1504 NC_011147.1 1675313 1675987 D response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 1675313..1675987 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142344.1 CDS SSPA1505 NC_011147.1 1675987 1677450 D 'similar to Salmonella typhi CT18 sensor protein PhoQ, regulator of virulence determinants'; sensor protein PhoQ 1675987..1677450 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142345.1 CDS SSPA1506 NC_011147.1 1677531 1678652 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1677531..1678652 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142346.1 CDS SSPA1507 NC_011147.1 1678692 1680026 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1678692..1680026) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142347.1 CDS SSPA1508 NC_011147.1 1680030 1681259 R catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T complement(1680030..1681259) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142348.1 CDS potA NC_011147.1 1681510 1682646 D functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase 1681510..1682646 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142349.1 CDS potB NC_011147.1 1682630 1683493 D can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter permease 1682630..1683493 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142350.1 CDS sifA NC_011147.1 1683822 1684832 D translocated by the type III secretion system SPI-2; required for the formation of lysosomal glycoprotein structures (Sifs); required for maintenance of membrane in the Salmonella-containing vacuole; a cysteine residue with CAAX motif is modified by isoprenoid addition of protein geranylgeranyl transferase I; also modified by S-acylation; secreted effector protein 1683822..1684832 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142351.1 CDS potC NC_011147.1 1685148 1685927 D can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter permease 1685148..1685927 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142352.1 CDS potD NC_011147.1 1685952 1686998 D can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; spermidine/putrescine ABC transporter substrate-binding protein 1685952..1686998 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142353.1 CDS SSPA1514 NC_011147.1 1687080 1687793 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(1687080..1687793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142354.1 CDS SSPA1515 NC_011147.1 1687918 1688829 R catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase complement(1687918..1688829) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142355.1 CDS SSPA1516 NC_011147.1 1688858 1690102 R part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE complement(1688858..1690102) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142356.1 CDS lolD NC_011147.1 1690102 1690803 R 'outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone'; lipoprotein transporter ATP-binding subunit complement(1690102..1690803) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142357.1 CDS SSPA1518 NC_011147.1 1690796 1692106 R part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC complement(1690796..1692106) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142358.1 CDS SSPA1519 NC_011147.1 1692333 1695779 D similar to Salmonella typhi CT18 transcription-repair coupling factor (TrcF); transcription-repair coupling factor 1692333..1695779 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142359.1 CDS SSPA1520 NC_011147.1 1695927 1696892 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1695927..1696892 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142360.1 CDS SSPA1521 NC_011147.1 1697021 1697479 R similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase complement(1697021..1697479) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142361.1 CDS SSPA1522 NC_011147.1 1697690 1697947 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(1697690..1697947) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142362.1 CDS SSPA1523 NC_011147.1 1698189 1698824 D similar to Salmonella typhi CT18 TetR-family regulatory protein; TetR family regulatory protein 1698189..1698824 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142363.2 CDS SSPA1524 NC_011147.1 1698899 1699438 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(1698899..1699438) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142364.1 CDS SSPA1525 NC_011147.1 1699617 1700864 R similar to Salmonella typhi CT18 NADH dehydrogenase; NADH dehydrogenase complement(1699617..1700864) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142365.1 CDS SSPA1526 NC_011147.1 1701175 1701717 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1701175..1701717) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142366.1 CDS SSPA1527 NC_011147.1 1701742 1702755 R hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase complement(1701742..1702755) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142367.1 CDS thiK NC_011147.1 1702778 1703602 R catalyzes the phosphorylation of thiamine to thiamine phosphate; thiamine kinase complement(1702778..1703602) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142368.1 CDS SSPA1529 NC_011147.1 1703583 1704221 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(1703583..1704221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142369.1 CDS SSPA1530 NC_011147.1 1704235 1704609 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(1704235..1704609) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142370.1 CDS SSPA1531 NC_011147.1 1704612 1704971 R similar to Salmonella typhi CT18 protein kinase C inhibitor; purine nucleoside phosphoramidase complement(1704612..1704971) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142371.1 CDS SSPA1532 NC_011147.1 1707572 1709005 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunit IIBC complement(1707572..1709005) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142372.1 CDS SSPA1533 NC_011147.1 1709300 1710097 R similar to Salmonella typhi CT18 conserved hypothetical protein; metallodependent hydrolase complement(1709300..1710097) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142373.1 CDS SSPA1534 NC_011147.1 1710108 1711112 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(1710108..1711112) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142374.1 CDS tmk NC_011147.1 1711109 1711750 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(1711109..1711750) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142375.2 CDS SSPA1536 NC_011147.1 1711740 1712762 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(1711740..1712762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142376.1 CDS SSPA1537 NC_011147.1 1712765 1713574 R catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase complement(1712765..1713574) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142377.1 CDS SSPA1538 NC_011147.1 1713698 1714903 R 'FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP'; 3-oxoacyl-(acyl carrier protein) synthase II complement(1713698..1714903) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142378.1 CDS acpP NC_011147.1 1715025 1715261 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(1715025..1715261) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142379.1 CDS fabG NC_011147.1 1715417 1716151 R catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(1715417..1716151) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142380.1 CDS SSPA1541 NC_011147.1 1716164 1717093 R similar to Salmonella typhi CT18 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(1716164..1717093) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142381.1 CDS SSPA1542 NC_011147.1 1717109 1718062 R FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(1717109..1718062) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142382.1 CDS SSPA1543 NC_011147.1 1718142 1719191 R involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX complement(1718142..1719191) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142383.1 CDS rpmF NC_011147.1 1719355 1719528 R some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 complement(1719355..1719528) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142384.1 CDS SSPA1545 NC_011147.1 1719580 1720101 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1719580..1720101) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142385.1 CDS SSPA1546 NC_011147.1 1720299 1720883 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1720299..1720883 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142386.1 CDS SSPA1547 NC_011147.1 1720966 1721925 R 'catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA'; 23S rRNA pseudouridylate synthase C complement(1720966..1721925) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142387.1 CDS SSPA1547a NC_011147.1 1722115 1722363 R hypothetical protein complement(1722115..1722363) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142388.1 CDS rne NC_011147.1 1722499 1725702 D 'bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase'; ribonuclease E 1722499..1725702 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142389.1 CDS flgL NC_011147.1 1725961 1726914 R 'with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes'; flagellar hook-associated protein FlgL complement(1725961..1726914) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142390.1 CDS flgK NC_011147.1 1726929 1728590 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(1726929..1728590) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142391.1 CDS flgJ NC_011147.1 1728655 1729605 R Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ complement(1728655..1729605) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142392.1 CDS flgI NC_011147.1 1729605 1730702 R 'part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum'; flagellar basal body P-ring protein complement(1729605..1730702) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142393.1 CDS flgH NC_011147.1 1730714 1731412 R 'part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod'; flagellar basal body L-ring protein complement(1730714..1731412) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142394.1 CDS flgG NC_011147.1 1731467 1732249 R makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG complement(1731467..1732249) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142395.1 CDS flgF NC_011147.1 1732263 1733018 R 'FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod'; flagellar basal body rod protein FlgF complement(1732263..1733018) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142396.1 CDS flgE NC_011147.1 1733039 1734250 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(1733039..1734250) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142397.1 CDS flgD NC_011147.1 1734277 1734975 R 'acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production'; flagellar basal body rod modification protein complement(1734277..1734975) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142398.1 CDS flgC NC_011147.1 1734987 1735391 R with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC complement(1734987..1735391) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142399.1 CDS flgB NC_011147.1 1735395 1735811 R with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB complement(1735395..1735811) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142400.1 CDS flgA NC_011147.1 1735968 1736627 D required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1735968..1736627 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142401.1 CDS SSPA1561 NC_011147.1 1736719 1737012 D regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM 1736719..1737012 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142402.1 CDS SSPA1562 NC_011147.1 1737017 1737439 D similar to Salmonella typhi CT18 flagella synthesis protein FlgN; flagella synthesis protein FlgN 1737017..1737439 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142403.1 CDS SSPA1563 NC_011147.1 1737521 1739095 R similar to Salmonella typhi CT18 virulence factor MviN; virulence factor MviN complement(1737521..1739095) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142404.1 CDS SSPA1564 NC_011147.1 1739360 1740283 R similar to Salmonella typhi CT18 virulence factor MviM; virulence factor MviM complement(1739360..1740283) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142405.1 CDS SSPA1565 NC_011147.1 1740285 1740932 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1740285..1740932) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142406.1 CDS SSPA1566 NC_011147.1 1740968 1741552 R similar to Salmonella typhi CT18 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-S5-alanine N-acetyltransferase complement(1740968..1741552) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142407.1 CDS SSPA1567 NC_011147.1 1741789 1742997 D Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 1741789..1742997 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142408.1 CDS SSPA1568 NC_011147.1 1743061 1743708 D cofactor involved in the reduction of disulfides; glutaredoxin 1743061..1743708 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144950.1 CDS yceB NC_011147.1 1743833 1744393 D hypothetical protein 1743833..1744393 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142409.1 CDS SSPA1569 NC_011147.1 1744497 1745543 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1744497..1745543 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142410.1 CDS SSPA1570 NC_011147.1 1745617 1745862 D similar to Salmonella typhi CT18 damage-inducible protein; DNA damage-inducible protein I 1745617..1745862 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142411.1 CDS bssS NC_011147.1 1746152 1746406 D 'BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing'; biofilm formation regulatory protein BssS 1746152..1746406 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142412.2 CDS solA NC_011147.1 1746519 1747637 D catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; N-methyltryptophan oxidase 1746519..1747637 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142413.1 CDS SSPA1573 NC_011147.1 1747678 1747791 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1747678..1747791 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142414.1 CDS SSPA1574 NC_011147.1 1748054 1748626 D similar to Salmonella typhi CT18 cytochrome; cytochrome 1748054..1748626 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142415.1 CDS SSPA1575 NC_011147.1 1748623 1749198 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1748623..1749198 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142416.1 CDS SSPA1576 NC_011147.1 1749250 1750302 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1749250..1750302) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142417.1 CDS SSPA1577 NC_011147.1 1750522 1751442 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1750522..1751442 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142418.1 CDS SSPA1578 NC_011147.1 1751597 1752811 D Confers resistance to fosfomycin and deoxycholate; drug efflux system protein MdtG 1751597..1752811 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142419.1 CDS SSPA1579 NC_011147.1 1752893 1753267 D similar to Salmonella typhi CT18 acidic protein MsyB; multicopy suppressor of SecY; hypothetical protein 1752893..1753267 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142420.1 CDS SSPA1580 NC_011147.1 1753268 1753495 R similar to Salmonella typhi CT18 lipoprotein; hypothetical protein complement(1753268..1753495) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142421.1 CDS SSPA1581 NC_011147.1 1753569 1756112 R necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH complement(1753569..1756112) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142422.1 CDS mdoG NC_011147.1 1756105 1757640 R involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G complement(1756105..1757640) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142423.1 CDS mdoC NC_011147.1 1757912 1759066 D required for the transfer of succinyl residues to the glucan backbone; glucans biosynthesis protein 1757912..1759066 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142424.1 CDS SSPA1584 NC_011147.1 1759083 1760570 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1759083..1760570) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142425.1 CDS SSPA1585 NC_011147.1 1760506 1761045 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1760506..1761045) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142426.1 CDS SSPA1586 NC_011147.1 1761134 1761454 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1761134..1761454) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142427.1 CDS csgC NC_011147.1 1761586 1761912 R involved in autoagglutination of curliated cells; not involved in production of curli fibers; autoagglutination protein complement(1761586..1761912) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142428.1 CDS SSPA1588 NC_011147.1 1761974 1762429 R similar to Salmonella typhi CT18 major curlin subunit precursor; cryptic curlin major subunit complement(1761974..1762429) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142429.1 CDS SSPA1589 NC_011147.1 1762471 1762926 R CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; curlin minor subunit complement(1762471..1762926) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142430.1 CDS SSPA1590 NC_011147.1 1763681 1764331 D activates the csgBA and csgDEFG operons involved in biofilm formation; DNA-binding transcriptional regulator CsgD 1763681..1764331 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142431.1 CDS SSPA1591 NC_011147.1 1764336 1764731 D chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; curli assembly protein CsgE 1764336..1764731 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142432.2 CDS SSPA1592 NC_011147.1 1765201 1766034 D similar to Salmonella typhi CT18 assembly/transport component in curli production; assembly/transport component in curli production 1765201..1766034 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142433.1 CDS SSPA1593 NC_011147.1 1766073 1766603 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1766073..1766603) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142434.1 CDS SSPA1594 NC_011147.1 1766656 1767210 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1766656..1767210) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142435.1 CDS SSPA1595 NC_011147.1 1767234 1767971 R similar to Salmonella typhi CT18 conserved hypothetical protein; hydrolase complement(1767234..1767971) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142436.1 CDS SSPA1596 NC_011147.1 1768056 1768994 R similar to Salmonella typhi CT18 2-hydroxyacid dehydrogenase in phoh-csgg intergenic region; 2-hydroxyacid dehydrogenase complement(1768056..1768994) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142437.1 CDS SSPA1597 NC_011147.1 1769469 1770572 R similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase complement(1769469..1770572) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142438.1 CDS SSPA1598 NC_011147.1 1770586 1771866 R similar to Salmonella typhi CT18 transporter; sialic acid transporter complement(1770586..1771866) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142439.1 CDS SSPA1599 NC_011147.1 1772149 1772841 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(1772149..1772841) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142440.1 CDS SSPA1600 NC_011147.1 1774552 1775232 D Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 1774552..1775232 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142441.1 CDS SSPA1601 NC_011147.1 1775569 1777065 D similar to Salmonella typhimurium sodium/glucose cotransporter; sodium/glucose cotransporter 1775569..1777065 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142442.1 CDS SSPA1602 NC_011147.1 1777351 1778232 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1777351..1778232 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142443.1 CDS SSPA1603 NC_011147.1 1778338 1779192 R similar to Salmonella typhi CT18 PhoH protein (phosphate starvation-inducible protein PsiH); hypothetical protein complement(1778338..1779192) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142444.1 CDS SSPA1604 NC_011147.1 1780018 1781526 R similar to Salmonella typhi CT18 sodium/proline symporter (proline permease); sodium/proline symporter complement(1780018..1781526) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142445.1 CDS putA NC_011147.1 1782005 1785910 D proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; multifunctional functional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1782005..1785910 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142446.1 CDS SSPA1606 NC_011147.1 1785969 1786364 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1785969..1786364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142447.1 CDS SSPA1607 NC_011147.1 1786361 1786999 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(1786361..1786999) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142448.1 CDS SSPA1608 NC_011147.1 1787135 1787302 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1787135..1787302) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142449.1 CDS SSPA1609 NC_011147.1 1787687 1788283 D stationary phase protein that binds TrpR repressor; TrpR binding protein WrbA 1787687..1788283 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142450.1 CDS SSPA1610 NC_011147.1 1788304 1788531 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1788304..1788531 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142451.1 CDS SSPA1611 NC_011147.1 1788565 1789806 R 'similar to Salmonella typhi CT18 glucose-1-phosphatase precursor (G1Pase), secreted'; glucose-1-phosphatase/inositol phosphatase complement(1788565..1789806) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142452.1 CDS SSPA1612 NC_011147.1 1789939 1790445 R 'similar to Salmonella typhi CT18 secreted protein,suppressor for copper-sensitivity D'; copper sensitivity supressor protein D complement(1789939..1790445) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142453.1 CDS SSPA1613 NC_011147.1 1790435 1791058 R 'similar to Salmonella typhi CT18 secreted protein,suppressor for copper-sensitivity C precursor'; copper sensitivity supressor protein C complement(1790435..1791058) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142454.1 CDS SSPA1614 NC_011147.1 1792990 1793352 R 'similar to Salmonella typhi CT18 membrane protein,suppressor for copper-sensitivity A'; copper sensitivitysuppressor membrane protein A complement(1792990..1793352) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142455.1 CDS SSPA1615 NC_011147.1 1793588 1794508 D 'functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock'; curved DNA-binding protein CbpA 1793588..1794508 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142456.1 CDS SSPA1616 NC_011147.1 1794508 1794813 D with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; chaperone-modulator protein CbpM 1794508..1794813 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142457.1 CDS SSPA1617 NC_011147.1 1795467 1795829 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1795467..1795829 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142458.1 CDS SSPA1618 NC_011147.1 1796237 1797154 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1796237..1797154) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142459.1 CDS SSPA1619 NC_011147.1 1797189 1798085 R similar to Salmonella typhi CT18 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein; 4-hydroxyphenylacetate 3-monooxygenase operon regulatory protein complement(1797189..1798085) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142460.1 CDS SSPA1620 NC_011147.1 1798095 1799471 R similar to Salmonella typhi CT18 4-hydroxyphenylacetate permease; 4-hydroxyphenylacetate permease complement(1798095..1799471) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142461.1 CDS SSPA1621 NC_011147.1 1799544 1800335 R 'similar to Salmonella typhi Ty2 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase'; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase complement(1799544..1800335) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142462.1 CDS SSPA1622 NC_011147.1 1800346 1801149 R 'similar to Salmonella typhi Ty2 2-oxo-hepta-3-ene-1,7-dioic acid hydratase'; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase complement(1800346..1801149) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142463.1 CDS SSPA1623 NC_011147.1 1801292 1801672 R similar to Salmonella typhi Ty2 5-carboxymethyl-2-hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(1801292..1801672) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142464.1 CDS SSPA1624 NC_011147.1 1801682 1802533 R 'similar to Salmonella typhi Ty2 3,4-dihydroxyphenylacetate 2,3-dioxygenase'; 3,4-dihydroxyphenylacetate 2,3-dioxygenase complement(1801682..1802533) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142465.1 CDS SSPA1625 NC_011147.1 1802535 1804001 R similar to Salmonella typhimurium 4-hydroxyphenylacetate catabolism; 4-hydroxyphenylacetate catabolism complement(1802535..1804001) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142466.1 CDS SSPA1626 NC_011147.1 1805561 1806001 D similar to Salmonella typhi Ty2 homoprotocatechuate degradative operon repressor; homoprotocatechuate degradative operon repressor 1805561..1806001 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142467.2 CDS SSPA1627 NC_011147.1 1806219 1807781 D similar to Salmonella typhi CT18 4-hydroxyphenylacetate 3-monooxygenase; 4-hydroxyphenylacetate 3-monooxygenase 1806219..1807781 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142468.1 CDS SSPA1628 NC_011147.1 1807799 1808311 D similar to Salmonella typhi CT18 4-hydroxyphenylacetate 3-monooxygenase coupling protein; 4-hydroxyphenylacetate 3-monooxygenase coupling protein 1807799..1808311 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142469.1 CDS SSPA1629 NC_011147.1 1808644 1809054 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(1808644..1809054) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142470.1 CDS SSPA1630 NC_011147.1 1809190 1809870 D induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced; transcriptional regulatory protein YedW 1809190..1809870 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142471.1 CDS SSPA1631 NC_011147.1 1809863 1811227 D similar to Salmonella typhi CT18 histidine kinase; histidine kinase 1809863..1811227 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142472.1 CDS SSPA1632 NC_011147.1 1812978 1813088 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1812978..1813088 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142473.1 CDS SSPA1633 NC_011147.1 1813089 1813259 R orfX; similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1813089..1813259) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142474.1 CDS SSPA1634 NC_011147.1 1813592 1815277 D similar to Salmonella typhi Ty2 cell invasion protein; cell invasion protein 1813592..1815277 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142475.1 CDS SSPA1635 NC_011147.1 1815294 1815635 D similar to Salmonella typhi Ty2 cell invasion protein; cell invasion protein 1815294..1815635 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142476.1 CDS SSPA1636 NC_011147.1 1815645 1815965 R inner membrane protein complement(1815645..1815965) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142477.1 CDS SSPA1637 NC_011147.1 1816183 1817058 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1816183..1817058 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142478.1 CDS SSPA1638 NC_011147.1 1817281 1817961 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1817281..1817961 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142479.2 CDS SSPA1639 NC_011147.1 1818580 1819239 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1818580..1819239 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142480.1 CDS SSPA1640 NC_011147.1 1819326 1819655 D transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein TusE 1819326..1819655 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142481.1 CDS SSPA1641 NC_011147.1 1819652 1819933 R catalyzes the hydrolysis of acylphosphate; acylphosphatase complement(1819652..1819933) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142482.1 CDS SSPA1642 NC_011147.1 1819982 1820761 R 'similar to Salmonella typhimurium bacterial regulatory protein, AraC family'; araC family transcriptional regulator complement(1819982..1820761) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142483.1 CDS SSPA1643 NC_011147.1 1821549 1822760 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1821549..1822760 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142484.1 CDS SSPA1644 NC_011147.1 1822818 1823135 D similar to Salmonella typhi CT18 conserved hypothetical protein; heat shock protein HspQ 1822818..1823135 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142485.1 CDS SSPA1645 NC_011147.1 1823180 1823593 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1823180..1823593) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142486.1 CDS SSPA1646 NC_011147.1 1823767 1824429 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 1823767..1824429 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142487.1 CDS mgsA NC_011147.1 1824524 1824982 D catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1824524..1824982 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142488.1 CDS helD NC_011147.1 1825018 1827072 R catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV complement(1825018..1827072) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142489.1 CDS SSPA1649 NC_011147.1 1827196 1827642 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1827196..1827642 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142490.1 CDS SSPA1650 NC_011147.1 1827661 1829814 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1827661..1829814 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142491.1 CDS SSPA1651 NC_011147.1 1829801 1830406 R 'similar to Salmonella typhi CT18 conserved hypothetical protein; SNP @ nt immediately before START codon (-1); Sanger - a, McClelland - g'; hypothetical protein complement(1829801..1830406) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142492.1 CDS SSPA1652 NC_011147.1 1830623 1831132 D similar to Salmonella typhi CT18 cell division inhibitor; SOS cell division inhibitor 1830623..1831132 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142493.1 CDS SSPA1653 NC_011147.1 1831489 1832541 D 'OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d'; outer membrane protein A 1831489..1832541 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142494.1 CDS SSPA1654 NC_011147.1 1832613 1833065 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1832613..1833065) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142495.2 CDS SSPA1655 NC_011147.1 1833251 1835011 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1833251..1835011 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142496.1 CDS SSPA1656 NC_011147.1 1835080 1835598 D 'catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP'; 3-hydroxydecanoyl-ACP dehydratase 1835080..1835598 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142497.1 CDS SSPA1657 NC_011147.1 1835698 1835865 R similar to Salmonella typhi CT18 ribosome modulation factor (protein E); ribosome modulation factor complement(1835698..1835865) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142498.1 CDS SSPA1658 NC_011147.1 1836121 1836684 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(1836121..1836684) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142499.1 CDS SSPA1659 NC_011147.1 1836681 1838321 R similar to Salmonella typhi CT18 secreted protein; paraquat-inducible protein B complement(1836681..1838321) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142500.1 CDS SSPA1660 NC_011147.1 1838326 1839579 R similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein complement(1838326..1839579) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142501.1 CDS SSPA1661 NC_011147.1 1839594 1841501 R Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase complement(1839594..1841501) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142502.1 CDS rlmL NC_011147.1 1841514 1843622 R catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase complement(1841514..1843622) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142503.1 CDS SSPA1663 NC_011147.1 1843721 1844830 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1843721..1844830 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142504.1 CDS SSPA1664 NC_011147.1 1844827 1845369 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1844827..1845369) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142505.1 CDS SSPA1665 NC_011147.1 1845535 1846545 R 'catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors'; dihydroorotate dehydrogenase 2 complement(1845535..1846545) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142506.1 CDS pepN NC_011147.1 1846753 1849365 R similar to Salmonella typhi CT18 aminopeptidase N; aminopeptidase N complement(1846753..1849365) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142507.1 CDS SSPA1667 NC_011147.1 1849632 1850834 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1849632..1850834 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142508.1 CDS SSPA1668 NC_011147.1 1850912 1852348 R similar to Salmonella typhi CT18 ion:amino acid symporter; ion:amino acid symporter complement(1850912..1852348) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142509.1 CDS SSPA1669 NC_011147.1 1852594 1853808 R 'catalyzes the formation of pyruvate from 2,3-diaminopropionate'; diaminopropionate ammonia-lyase complement(1852594..1853808) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142510.1 CDS SSPA1670 NC_011147.1 1854126 1854587 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 1854126..1854587 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142511.1 CDS asnC NC_011147.1 1854788 1856188 D 'catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; asparaginyl-tRNA synthetase 1854788..1856188 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142512.1 CDS SSPA1672 NC_011147.1 1856795 1857886 D similar to Salmonella typhi CT18 outer membrane protein F precursor; outer membrane protein F 1856795..1857886 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142513.1 CDS SSPA1673 NC_011147.1 1858071 1859261 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1858071..1859261 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142514.1 CDS SSPA1674 NC_011147.1 1859323 1859970 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1859323..1859970) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142515.1 CDS SSPA1675 NC_011147.1 1859998 1860546 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(1859998..1860546) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142516.1 CDS SSPA1676 NC_011147.1 1860806 1862653 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(1860806..1862653) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142517.1 CDS mukB NC_011147.1 1862998 1867464 R SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB complement(1862998..1867464) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142518.1 CDS SSPA1678 NC_011147.1 1867464 1868141 R acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E complement(1867464..1868141) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142519.1 CDS SSPA1679 NC_011147.1 1868149 1869471 R acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F complement(1868149..1869471) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142520.1 CDS SSPA1680 NC_011147.1 1869464 1870267 R involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA complement(1869464..1870267) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142521.1 CDS SSPA1681 NC_011147.1 1870403 1871179 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1870403..1871179 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142522.1 CDS SSPA1682 NC_011147.1 1871159 1872052 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1871159..1872052) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142523.1 CDS SSPA1683 NC_011147.1 1872263 1873009 R CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase complement(1872263..1873009) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142524.1 CDS SSPA1684 NC_011147.1 1873006 1873188 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1873006..1873188) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142525.1 CDS SSPA1685 NC_011147.1 1873240 1874472 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(1873240..1874472) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142526.1 CDS lpxK NC_011147.1 1874516 1875493 R 'transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate'; tetraacyldisaccharide 4'-kinase complement(1874516..1875493) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142527.1 CDS SSPA1687 NC_011147.1 1875490 1877238 R involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding protein/permease complement(1875490..1877238) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142528.1 CDS ihfB NC_011147.1 1879769 1880053 R 'This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control'; integration host factor subunit beta complement(1879769..1880053) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142529.1 CDS rpsA NC_011147.1 1880209 1881882 R in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 complement(1880209..1881882) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142530.1 CDS cmk NC_011147.1 1881996 1882679 R Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase complement(1881996..1882679) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142531.1 CDS SSPA1691 NC_011147.1 1882852 1883613 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(1882852..1883613) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142532.1 CDS SSPA1692 NC_011147.1 1883756 1885039 R catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1883756..1885039) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142533.1 CDS SSPA1693 NC_011147.1 1885110 1886162 R catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase complement(1885110..1886162) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142534.1 CDS SSPA1694 NC_011147.1 1886384 1887076 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1886384..1887076) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142535.1 CDS SSPA1695 NC_011147.1 1887213 1888973 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1887213..1888973 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142536.1 CDS SSPA1696 NC_011147.1 1889378 1890235 D similar to Salmonella typhi CT18 probable formate transporter (formate channel); formate transporter 1889378..1890235 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142537.1 CDS SSPA1697 NC_011147.1 1890295 1892577 D similar to Salmonella typhi CT18 formate acetyltransferase 1; formate acetyltransferase 1 1890295..1892577 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142538.1 CDS SSPA1700 NC_011147.1 1893743 1894069 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 1893743..1894069 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142539.1 CDS pflA NC_011147.1 1894188 1894985 D activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate-lyase activating protein 1 1894188..1894985 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142540.1 CDS SSPA1702 NC_011147.1 1895278 1896699 R similar to Salmonella typhi CT18 probable transport protein; transporter complement(1895278..1896699) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142541.1 CDS SSPA1703 NC_011147.1 1896917 1898065 R similar to Salmonella typhi CT18 probable transport protein; MFS family transporter protein complement(1896917..1898065) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142542.1 CDS SSPA1704 NC_011147.1 1898278 1898385 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(1898278..1898385) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142543.1 CDS SSPA1705 NC_011147.1 1899280 1899897 R similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain B; anaerobic dimethyl sulfoxide reductase subunit B complement(1899280..1899897) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142544.1 CDS SSPA1706 NC_011147.1 1899908 1902352 R similar to Salmonella typhi CT18 anaerobic dimethyl sulfoxide reductase chain A precursor; anaerobic dimethyl sulfoxide reductase subunit A complement(1899908..1902352) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142545.1 CDS SSPA1707 NC_011147.1 1902588 1903880 R 'catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; seryl-tRNA synthetase complement(1902588..1903880) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142546.1 CDS SSPA1708 NC_011147.1 1904139 1905482 R similar to Salmonella typhi CT18 conserevd hypothetical protein; recombination factor protein RarA complement(1904139..1905482) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142547.2 CDS lolA NC_011147.1 1905492 1906106 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(1905492..1906106) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142548.1 CDS SSPA1710 NC_011147.1 1906246 1910346 R DNA-binding membrane protein required for chromosome resolution and partitioning; DNA translocase FtsK complement(1906246..1910346) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142549.1 CDS SSPA1711 NC_011147.1 1910481 1910975 R mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator complement(1910481..1910975) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142550.1 CDS SSPA1712 NC_011147.1 1911522 1912490 D catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; thioredoxin reductase 1911522..1912490 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142551.2 CDS SSPA1713 NC_011147.1 1912604 1914370 D in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1912604..1914370 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142552.1 CDS SSPA1714 NC_011147.1 1914371 1916092 D in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1914371..1916092 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142553.1 CDS aat NC_011147.1 1916137 1916841 D 'leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys'; leucyl/phenylalanyl-tRNA--protein transferase 1916137..1916841 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142554.1 CDS SSPA1716 NC_011147.1 1916842 1917225 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 1916842..1917225 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142555.1 CDS infA NC_011147.1 1917153 1917371 D 'stimulates the activities of the other two initiation factors, IF-2 and IF-3'; translation initiation factor IF-1 1917153..1917371 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142556.1 CDS SSPA1718 NC_011147.1 1917462 1918373 R similar to Salmonella typhi CT18 hypothetical transcriptional activator; hypothetical protein complement(1917462..1918373) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142557.1 CDS SSPA1719 NC_011147.1 1918482 1919342 D similar to Salmonella typhi CT18 pirin-related protein; pirin-like protein 1918482..1919342 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142558.1 CDS SSPA1720 NC_011147.1 1919362 1920039 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1919362..1920039 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142559.1 CDS SSPA1721 NC_011147.1 1920393 1920605 D hypothetical protein 1920393..1920605 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142560.1 CDS SSPA1722 NC_011147.1 1920713 1921090 D similar to Salmonella typhi CT18 probable integrase remnant; integrase remnant 1920713..1921090 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142561.1 CDS SSPA1723 NC_011147.1 1921252 1921449 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 1921252..1921449 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142562.1 CDS clpA NC_011147.1 1923879 1926155 R ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit complement(1923879..1926155) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142563.1 CDS clpS NC_011147.1 1926186 1926506 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(1926186..1926506) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142564.1 CDS SSPA1726 NC_011147.1 1926830 1927051 D similar to Salmonella typhi CT18 cold shock-like protein CspD; cold shock-like protein CspD 1926830..1927051 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142565.1 CDS SSPA1727 NC_011147.1 1927181 1929127 R with MacA is involved in the export of macrolide; macrolide transporter ATP-binding /permease complement(1927181..1929127) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142566.1 CDS SSPA1728 NC_011147.1 1929124 1930242 R confers macrolide resistance via active drug efflux; macrolide transporter subunit MacA complement(1929124..1930242) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142567.1 CDS SSPA1729 NC_011147.1 1930388 1931338 D similar to Salmonella typhi CT18 virK protein; virK protein 1930388..1931338 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142568.1 CDS SSPA1730 NC_011147.1 1931335 1932993 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1931335..1932993) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142569.2 CDS SSPA1731 NC_011147.1 1933195 1934094 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1933195..1934094 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142570.1 CDS SSPA1732 NC_011147.1 1934238 1935890 D catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1934238..1935890 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142571.1 CDS SSPA1733 NC_011147.1 1935902 1936870 D similar to Salmonella typhi CT18 NADH oxidoreductase Hcr; HCP oxidoreductase, NADH-dependent 1935902..1936870 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142572.1 CDS SSPA1734 NC_011147.1 1937028 1938746 D catalyzes the formation of acetate from pyruvate; pyruvate dehydrogenase 1937028..1938746 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142573.1 CDS SSPA1735 NC_011147.1 1938785 1939786 D 'low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine'; L-threonine aldolase 1938785..1939786 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142574.1 CDS SSPA1736 NC_011147.1 1939797 1941230 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1939797..1941230 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142575.1 CDS SSPA1737 NC_011147.1 1941326 1942339 D similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 1941326..1942339 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142576.1 CDS SSPA1738 NC_011147.1 1942336 1943166 R similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(1942336..1943166) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142577.1 CDS SSPA1739 NC_011147.1 1943163 1943486 R orfB; similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1943163..1943486) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142578.1 CDS SSPA1740 NC_011147.1 1943614 1944129 D induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; lipoprotein 1943614..1944129 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142579.1 CDS artP NC_011147.1 1944358 1945086 D With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit 1944358..1945086 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142580.1 CDS SSPA1742 NC_011147.1 1945104 1945835 D similar to Salmonella typhi CT18 arginine-binding periplasmic protein 1 precursor; arginine-binding periplasmic protein 1 1945104..1945835 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142581.1 CDS SSPA1743 NC_011147.1 1945842 1946558 D with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 1945842..1946558 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142582.1 CDS artM NC_011147.1 1946558 1947226 D with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 1946558..1947226 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142583.1 CDS SSPA1745 NC_011147.1 1947463 1948194 D similar to Salmonella typhi CT18 arginine-binding periplasmic protein 2 precursor; arginine-binding periplasmic protein 1947463..1948194 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142584.1 CDS SSPA1746 NC_011147.1 1948412 1949899 R similar to Salmonella typhi CT18 probable sulfatase; sulfatase complement(1948412..1949899) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142585.1 CDS SSPA1747 NC_011147.1 1949909 1950229 R 'similar to Salmonella typhi CT18 phosphotransferase enzyme II, B component'; phosphotransferase system subunit IIB complement(1949909..1950229) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142586.1 CDS SSPA1748 NC_011147.1 1950259 1951602 R membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC complement(1950259..1951602) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142587.1 CDS SSPA1749 NC_011147.1 1951611 1951820 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1951611..1951820) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142588.1 CDS rumB NC_011147.1 1951897 1953024 R RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase complement(1951897..1953024) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142589.1 CDS SSPA1751 NC_011147.1 1953067 1953540 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1953067..1953540) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142590.1 CDS SSPA1752 NC_011147.1 1953614 1954459 R similar to Salmonella typhi CT18 putrescine transport system permease protein PotI; putrescine ABC transporter permease complement(1953614..1954459) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142591.1 CDS SSPA1753 NC_011147.1 1954456 1955409 R similar to Salmonella typhi CT18 putrescine transport system permease protein PotH; putrescine ABC transporter permease complement(1954456..1955409) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142592.1 CDS potG NC_011147.1 1955419 1956552 R part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein complement(1955419..1956552) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142593.1 CDS SSPA1755 NC_011147.1 1956640 1957752 R similar to Salmonella typhi CT18 putrescine-binding periplasmic protein precursor; putrescine ABC transporter substrate-binding protein complement(1956640..1957752) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142594.1 CDS SSPA1756 NC_011147.1 1958101 1958577 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(1958101..1958577) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142595.1 CDS SSPA1757 NC_011147.1 1958674 1959576 R responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; ribosomal protein S6 modification protein complement(1958674..1959576) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142596.1 CDS SSPA1758 NC_011147.1 1959634 1960356 R NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A complement(1959634..1960356) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142597.1 CDS SSPA1759 NC_011147.1 1960340 1960636 R YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; hypothetical protein complement(1960340..1960636) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142598.1 CDS grxA NC_011147.1 1960806 1961069 D functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 1960806..1961069 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142599.1 CDS SSPA1761 NC_011147.1 1961101 1961478 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1961101..1961478) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142600.1 CDS SSPA1762 NC_011147.1 1961749 1963434 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1961749..1963434 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142601.1 CDS SSPA1763 NC_011147.1 1963551 1964171 R similar to Salmonella typhi CT18 tetR-family transcriptional regulator; TetR family regulatory protein complement(1963551..1964171) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142602.2 CDS SSPA1764 NC_011147.1 1964339 1965550 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1964339..1965550 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142603.1 CDS SSPA1765 NC_011147.1 1965547 1966362 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1965547..1966362 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142604.1 CDS SSPA1766 NC_011147.1 1966416 1967648 R similar to Salmonella typhi CT18 multidrug translocase MdfA; multidrug translocase MdfA complement(1966416..1967648) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142605.1 CDS SSPA1767 NC_011147.1 1967961 1968569 D similar to Salmonella typhi CT18 permease protein; undecaprenyl pyrophosphate phosphatase 1967961..1968569 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142606.1 CDS SSPA1768 NC_011147.1 1968641 1969399 D similar to Salmonella typhi CT18 deoxyribose operon repressor; DNA-binding transcriptional repressor DeoR 1968641..1969399 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142607.1 CDS SSPA1769 NC_011147.1 1969444 1970646 R 'penicillin-binding protein 6a; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'; D-alanyl-D-alanine carboxypeptidase complement(1969444..1970646) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142608.1 CDS SSPA1770 NC_011147.1 1970890 1971516 D similar to Salmonella typhi CT18 glutathione s-transferase family protein; glutathione s-transferase family protein 1970890..1971516 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142609.1 CDS SSPA1771 NC_011147.1 1971513 1972646 R similar to Salmonella typhi Ty2 oxidoreductase; oxidoreductase complement(1971513..1972646) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142610.1 CDS bssR NC_011147.1 1972764 1973147 R 'BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing'; biofilm formation regulatory protein BssR complement(1972764..1973147) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142611.1 CDS rimO NC_011147.1 1973378 1974703 D catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 1973378..1974703 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142612.1 CDS SSPA1774 NC_011147.1 1974794 1975705 R similar to Salmonella typhi CT18 hypothetical ABC transporter permease protein; hypothetical protein complement(1974794..1975705) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142613.1 CDS SSPA1775 NC_011147.1 1975708 1976628 R similar to Salmonella typhi CT18 hypothetical ABC transporter permease protein; hypothetical protein complement(1975708..1976628) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142614.1 CDS SSPA1776 NC_011147.1 1976689 1978227 R similar to Salmonella typhi CT18 ABC transporter periplasmic binding protein; ABC transporter substrate-binding protein complement(1976689..1978227) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142615.1 CDS SSPA1777 NC_011147.1 1978260 1980131 R with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; glutathione transporter ATP-binding protein complement(1978260..1980131) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142616.1 CDS SSPA1778 NC_011147.1 1980142 1981026 R similar to Salmonella typhi CT18 L-asparaginase; L-asparaginase complement(1980142..1981026) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142617.1 CDS SSPA1779 NC_011147.1 1981287 1982522 D is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 1981287..1982522 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142618.1 CDS SSPA1780 NC_011147.1 1982546 1983271 D 'ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase'; molybdopterin biosynthesis protein MoeB 1982546..1983271 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142619.1 CDS SSPA1781 NC_011147.1 1983549 1984448 D similar to Salmonella typhi Ty2 pyruvate formate-lyase 3 activating enzyme; pyruvate formate-lyase 3 activating protein 1983549..1984448 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142620.1 CDS SSPA1782 NC_011147.1 1984454 1986886 D similar to Salmonella typhi Ty2 formate acetyltransferase 3; formate acetyltransferase 3 1984454..1986886 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142621.1 CDS SSPA1783 NC_011147.1 1986964 1987773 R similar to Salmonella typhimurium hydrolase of the HAD superfamily; hydrolase complement(1986964..1987773) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142622.1 CDS SSPA1784 NC_011147.1 1988035 1989300 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 1988035..1989300 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142623.1 CDS SSPA1785 NC_011147.1 1989422 1990993 R similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(1989422..1990993) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142624.1 CDS SSPA1786 NC_011147.1 1991237 1992157 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 1991237..1992157 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142625.2 CDS SSPA1787 NC_011147.1 1992201 1993313 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(1992201..1993313) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142626.1 CDS SSPA1788 NC_011147.1 1993310 1993783 R Transcriptional regulator that represses the manganese transporter MntH when manganese is present; manganese transport regulator MntR complement(1993310..1993783) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142627.1 CDS SSPA1789 NC_011147.1 1994362 1995942 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 1994362..1995942 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142628.1 CDS ompX NC_011147.1 1996005 1996520 R OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X complement(1996005..1996520) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142629.1 CDS SSPA1791 NC_011147.1 1998063 1998566 D binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 1998063..1998566 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142630.1 CDS glnH NC_011147.1 1999043 1999789 D similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter substrate-binding protein 1999043..1999789 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142631.1 CDS glnP NC_011147.1 1999935 2000594 D similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 1999935..2000594 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142632.1 CDS glnQ NC_011147.1 2000591 2001313 D similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 2000591..2001313 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142633.1 CDS SSPA1795 NC_011147.1 2001432 2003654 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2001432..2003654 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142634.1 CDS SSPA1796 NC_011147.1 2003651 2004577 R similar to Salmonella typhimurium SAM-dependent methyltransferase; SAM-dependent methyltransferase complement(2003651..2004577) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142635.1 CDS SSPA1797 NC_011147.1 2004782 2005048 D similar to Salmonella typhi CT18 hypothetical Zinc-finger containing protein; hypothetical protein 2004782..2005048 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142636.1 CDS SSPA1798 NC_011147.1 2005206 2005346 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2005206..2005346 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142637.1 CDS SSPA1799 NC_011147.1 2005333 2005593 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 2005333..2005593 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142638.1 CDS SSPA1800 NC_011147.1 2005749 2006723 R similar to Salmonella typhimurium transferase; glycosyl transferase complement(2005749..2006723) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142639.2 CDS dinG NC_011147.1 2006753 2008897 R helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG complement(2006753..2008897) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142640.1 CDS SSPA1802 NC_011147.1 2009104 2010465 R this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE complement(2009104..2010465) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142641.1 CDS SSPA1803 NC_011147.1 2010695 2011369 D similar to Salmonella typhi CT18 hypothetical tetR-family transcriptional regulator; DNA-binding transcriptional regulator 2010695..2011369 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142642.1 CDS SSPA1804 NC_011147.1 2011369 2012364 D similar to Salmonella typhi CT18 HlyD-family secretion protein; hypothetical protein 2011369..2012364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142643.1 CDS SSPA1805 NC_011147.1 2012357 2014093 D similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; hypothetical protein 2012357..2014093 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142644.1 CDS SSPA1806 NC_011147.1 2014086 2015216 D similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 2014086..2015216 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142645.1 CDS SSPA1807 NC_011147.1 2015332 2016438 D similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 2015332..2016438 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142646.1 CDS SSPA1808 NC_011147.1 2016400 2016810 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2016400..2016810) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142647.1 CDS SSPA1809 NC_011147.1 2016943 2017701 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2016943..2017701 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142648.1 CDS SSPA1810 NC_011147.1 2017698 2018939 D similar to Salmonella typhi CT18 phospholipase; cardiolipin synthase 2 2017698..2018939 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142649.1 CDS SSPA1811 NC_011147.1 2018939 2019901 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2018939..2019901 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142650.1 CDS SSPA1813 NC_011147.1 2020336 2021043 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2020336..2021043) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142651.1 CDS SSPA1814 NC_011147.1 2021190 2021894 R similar to Salmonella typhimurium permease; permease complement(2021190..2021894) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142652.1 CDS moaE NC_011147.1 2021942 2022394 R catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE complement(2021942..2022394) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142653.1 CDS moaD NC_011147.1 2022396 2022647 R catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit complement(2022396..2022647) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142654.1 CDS moaC NC_011147.1 2022634 2023119 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(2022634..2023119) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142655.1 CDS SSPA1818 NC_011147.1 2023122 2023634 R similar to Salmonella typhi CT18 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B complement(2023122..2023634) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142656.1 CDS moaA NC_011147.1 2023656 2024645 R 'together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z'; molybdenum cofactor biosynthesis protein A complement(2023656..2024645) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142657.1 CDS SSPA1820 NC_011147.1 2025042 2025950 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2025042..2025950 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142658.1 CDS SSPA1821 NC_011147.1 2028318 2028491 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2028318..2028491) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142659.1 CDS SSPA1822 NC_011147.1 2028799 2030820 R 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion'; excinuclease ABC subunit B complement(2028799..2030820) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142660.1 CDS bioD NC_011147.1 2031471 2032157 R 'DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium'; dithiobiotin synthetase complement(2031471..2032157) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142661.1 CDS SSPA1824 NC_011147.1 2032150 2032905 R 'methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth'; biotin biosynthesis protein BioC complement(2032150..2032905) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142662.1 CDS SSPA1825 NC_011147.1 2032889 2034046 R catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase complement(2032889..2034046) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142663.1 CDS SSPA1826 NC_011147.1 2034043 2035083 R similar to Salmonella typhi CT18 biotin synthetase; biotin synthetase complement(2034043..2035083) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142664.1 CDS SSPA1827 NC_011147.1 2035170 2036459 D 'catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate'; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2035170..2036459 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142665.1 CDS SSPA1828 NC_011147.1 2036517 2036993 D YbhB; similar to rat and human kinase inhibitory proteins; kinase inhibitor protein 2036517..2036993 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142666.1 CDS SSPA1829 NC_011147.1 2037078 2038598 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(2037078..2038598) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142667.1 CDS SSPA1830 NC_011147.1 2040482 2041159 R similar to Salmonella typhi CT18 histidine utilization repressor; histidine utilization repressor complement(2040482..2041159) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142668.1 CDS SSPA1831 NC_011147.1 2041252 2042193 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(2041252..2042193) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142669.1 CDS SSPA1832 NC_011147.1 2042190 2043413 R 'catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway'; imidazolonepropionase complement(2042190..2043413) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142670.1 CDS SSPA1833 NC_011147.1 2043651 2044934 D outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family; pectinesterase 2043651..2044934 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142671.1 CDS SSPA1834 NC_011147.1 2045078 2046073 R catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase complement(2045078..2046073) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142672.1 CDS SSPA1835 NC_011147.1 2046237 2047055 D 'YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily'; phosphotransferase 2046237..2047055 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142673.1 CDS modC NC_011147.1 2047056 2048114 R Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein complement(2047056..2048114) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142674.1 CDS modB NC_011147.1 2048117 2048806 R part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease complement(2048117..2048806) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142675.1 CDS modA NC_011147.1 2048806 2049579 R with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein complement(2048806..2049579) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142676.1 CDS ybhT NC_011147.1 2049746 2049997 R hypothetical protein complement(2049746..2049997) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142677.1 CDS SSPA1840 NC_011147.1 2050024 2050812 D represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 2050024..2050812 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142678.1 CDS SSPA1841 NC_011147.1 2050880 2052355 D contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF 2050880..2052355 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142679.1 CDS SSPA1842 NC_011147.1 2052526 2053434 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2052526..2053434 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142680.1 CDS SSPA1843 NC_011147.1 2053657 2054673 D similar to Salmonella typhi CT18 UDP-glucose 4-epimerase; UDP-galactose-4-epimerase 2053657..2054673 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142681.1 CDS SSPA1844 NC_011147.1 2054684 2055730 D catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 2054684..2055730 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142682.1 CDS SSPA1845 NC_011147.1 2055733 2056881 D catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 2055733..2056881 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142683.1 CDS galM NC_011147.1 2056875 2057915 D 'catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose'; aldose 1-epimerase 2056875..2057915 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142684.1 CDS gpmA NC_011147.1 2058139 2058891 D '2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate'; phosphoglyceromutase 2058139..2058891 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142685.1 CDS SSPA1848 NC_011147.1 2058982 2059758 R similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(2058982..2059758) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142686.1 CDS SSPA1849 NC_011147.1 2059758 2060837 R similar to Salmonella typhi CT18 ABC transporter permease (FecCD_family); ABC transporter permease complement(2059758..2060837) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142687.1 CDS SSPA1850 NC_011147.1 2060990 2062042 R 'catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive'; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2060990..2062042) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142688.1 CDS SSPA1851 NC_011147.1 2062362 2062748 D hypothetical protein 2062362..2062748 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142689.1 CDS SSPA1852 NC_011147.1 2062859 2063797 D involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB 2062859..2063797 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142690.1 CDS SSPA1853 NC_011147.1 2063794 2064513 R similar to Salmonella typhi CT18 pnuC protein; pnuC protein complement(2063794..2064513) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142691.1 CDS SSPA1854 NC_011147.1 2064538 2065581 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2064538..2065581) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142692.1 CDS SSPA1855 NC_011147.1 2067090 2067878 R periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF complement(2067090..2067878) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142693.1 CDS SSPA1856 NC_011147.1 2067888 2068412 R similar to Salmonella typhi CT18 peptidoglycan-associated lipoprotein precursor; peptidoglycan-associated outer membrane lipoprotein complement(2067888..2068412) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142694.1 CDS tolB NC_011147.1 2068447 2069739 R forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB complement(2068447..2069739) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142695.1 CDS tolA NC_011147.1 2069863 2071032 R 'inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins'; cell envelope integrity inner membrane protein TolA complement(2069863..2071032) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142696.1 CDS SSPA1859 NC_011147.1 2071097 2071525 R membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR complement(2071097..2071525) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142697.1 CDS SSPA1860 NC_011147.1 2071529 2072221 R membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ complement(2071529..2072221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142698.1 CDS SSPA1861 NC_011147.1 2072218 2072622 R catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase YbgC complement(2072218..2072622) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142699.1 CDS SSPA1862 NC_011147.1 2072851 2073132 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2072851..2073132) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142700.1 CDS SSPA1863 NC_011147.1 2073344 2073457 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2073344..2073457) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142701.1 CDS SSPA1864 NC_011147.1 2073472 2074611 R similar to Salmonella typhi CT18 cytochrome d ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II complement(2073472..2074611) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142702.1 CDS SSPA1865 NC_011147.1 2074627 2076195 R similar to Salmonella typhi CT18 cytochrome d ubiquinol oxidase subunit I; cytochrome d ubiquinol oxidase subunit I complement(2074627..2076195) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142703.1 CDS SSPA1866 NC_011147.1 2077781 2078650 R Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha complement(2077781..2078650) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142704.1 CDS sucC NC_011147.1 2078650 2079816 R catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta complement(2078650..2079816) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142705.1 CDS SSPA1868 NC_011147.1 2079958 2081166 R component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase complement(2079958..2081166) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142706.1 CDS sucA NC_011147.1 2081181 2083982 R SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component complement(2081181..2083982) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142707.1 CDS sdhB NC_011147.1 2084508 2085227 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(2084508..2085227) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142708.1 CDS sdhA NC_011147.1 2085241 2087007 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(2085241..2087007) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142709.1 CDS sdhD NC_011147.1 2087007 2087354 R similar to Salmonella typhi CT18 succinate dehydrogenase hydrophobic membrane anchor protein; succinate dehydrogenase cytochrome b556 small membrane subunit complement(2087007..2087354) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142710.1 CDS sdhC NC_011147.1 2087348 2087737 R similar to Salmonella typhi CT18 succinate dehydrogenase cytochrome b-556 subunit; succinate dehydrogenase cytochrome b556 large membrane subunit complement(2087348..2087737) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142711.1 CDS SSPA1874 NC_011147.1 2088146 2088391 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2088146..2088391) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142712.1 CDS gltA NC_011147.1 2088492 2089775 D 'type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH'; type II citrate synthase 2088492..2089775 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142713.2 CDS SSPA1876 NC_011147.1 2089912 2090958 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2089912..2090958 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142714.1 CDS SSPA1877 NC_011147.1 2091013 2091804 R 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII complement(2091013..2091804) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142715.1 CDS SSPA1878 NC_011147.1 2091853 2091990 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2091853..2091990) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142716.1 CDS SSPA1879 NC_011147.1 2092058 2094007 R similar to Salmonella typhimurium glycosyl transferase; glycosyl transferase family protein complement(2092058..2094007) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142717.1 CDS SSPA1880 NC_011147.1 2094011 2094844 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2094011..2094844) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142718.1 CDS SSPA1881 NC_011147.1 2095037 2096815 R 'similar to Salmonella typhimurium glycosyltransferase, cell wall biogenesis'; glycosyltransferase complement(2095037..2096815) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142719.1 CDS SSPA1882 NC_011147.1 2096909 2097619 R similar to Salmonella typhi CT18 polysaccharide export ABC transporter ATP-binding protein; polysaccharide export ABC transporter ATP-binding protein complement(2096909..2097619) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142720.1 CDS SSPA1882a NC_011147.1 2097623 2098393 R 'Similarity: STY0762 (Typhi pseudogene); Similarity: Q8ZQV2_SALTY Q8ZQV2 ABC transporter permease protein. Score = 1321 (470.1 bits),Expect = 6.8e-134, P = 6.8e-134 Identities = 254/256 (99%), Positives = 255/256 (99%)'; polysaccharide export ABC transporter permease complement(2097623..2098393) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142721.1 CDS SSPA1883 NC_011147.1 2098522 2099655 R similar to Salmonella typhi CT18 galactosyltransferase; galactosyltransferase complement(2098522..2099655) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142722.1 CDS SSPA1884 NC_011147.1 2100560 2101738 R similar to Salmonella typhi CT18 UDP-galactopyranose mutase; UDP-galactopyranose mutase complement(2100560..2101738) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142723.1 CDS SSPA1885 NC_011147.1 2101997 2102737 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2101997..2102737) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142724.1 CDS SSPA1886 NC_011147.1 2103533 2104099 R similar to Salmonella typhi CT18 probable DNA recombinase; DNA recombinase complement(2103533..2104099) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142725.1 CDS SSPA1887 NC_011147.1 2104159 2104290 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2104159..2104290) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142726.1 CDS SSPA1888 NC_011147.1 2104613 2105347 R similar to Salmonella typhi CT18 conserved hypothetical protein; LamB/YcsF family protein complement(2104613..2105347) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142727.1 CDS SSPA1889 NC_011147.1 2105337 2106269 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2105337..2106269) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142728.1 CDS SSPA1890 NC_011147.1 2106263 2106919 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2106263..2106919) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142729.1 CDS SSPA1891 NC_011147.1 2106935 2107678 R similar to Salmonella typhi CT18 conserved hypothetical protein; hydrolase-oxidase complement(2106935..2107678) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142730.1 CDS SSPA1892 NC_011147.1 2108007 2109488 D similar to Salmonella typhi CT18 PTR2-family transport protein; PTR2-family transport protein 2108007..2109488 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142731.1 CDS SSPA1893 NC_011147.1 2109527 2110948 R UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase complement(2109527..2110948) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142732.1 CDS SSPA1894 NC_011147.1 2111059 2111265 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(2111059..2111265) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142733.1 CDS SSPA1895 NC_011147.1 2111494 2111691 D hypothetical protein 2111494..2111691 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142734.1 CDS SSPA1896 NC_011147.1 2111691 2113370 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 2111691..2113370 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142735.1 CDS SSPA1897 NC_011147.1 2113391 2115439 D 'One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions'; potassium-transporting ATPase subunit B 2113391..2115439 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142736.1 CDS SSPA1898 NC_011147.1 2115445 2116032 D 'One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex'; potassium-transporting ATPase subunit C 2115445..2116032 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142737.1 CDS SSPA1899 NC_011147.1 2116029 2118713 D sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 2116029..2118713 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142738.1 CDS SSPA1900 NC_011147.1 2118710 2119387 D response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 2118710..2119387 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142739.1 CDS SSPA1901 NC_011147.1 2120150 2122348 D 'similar to Salmonella typhimurium ornithine decarboxylase isozyme, inducible'; ornithine decarboxylase 2120150..2122348 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142740.1 CDS potE NC_011147.1 2122345 2123664 D 'catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system'; putrescine transporter 2122345..2123664 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142741.1 CDS SSPA1903 NC_011147.1 2123729 2124214 D similar to Salmonella typhi CT18 possible 5-nitroimidazole antibiotic resistance; 5-nitroimidazole antibiotic resistance 2123729..2124214 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142742.1 CDS SSPA1904 NC_011147.1 2124329 2125969 R catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase complement(2124329..2125969) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142743.1 CDS SSPA1905 NC_011147.1 2125994 2126536 R negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA complement(2125994..2126536) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142744.1 CDS SSPA1906 NC_011147.1 2126721 2127491 D similar to Salmonella typhi CT18 esterase/lipase YbfF; hypothetical protein 2126721..2127491 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142745.1 CDS SSPA1907 NC_011147.1 2127625 2127918 D similar to Salmonella typhi CT18 conserved hypothetical protein; LexA regulated protein 2127625..2127918 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142746.1 CDS SSPA1908 NC_011147.1 2128069 2128599 D 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group'; flavodoxin FldA 2128069..2128599 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142747.1 CDS fur NC_011147.1 2128881 2129333 D negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 2128881..2129333 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142748.1 CDS SSPA1910 NC_011147.1 2129448 2130374 D similar to Salmonella typhi CT18 lysR-family transcriptional regulator; LysR family transcriptional regulator 2129448..2130374 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142749.1 CDS SSPA1911 NC_011147.1 2130472 2131875 D catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica; tricarballylate dehydrogenase 2130472..2131875 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142750.1 CDS SSPA1912 NC_011147.1 2131862 2133001 D citB-like protein 2131862..2133001 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142751.1 CDS SSPA1913 NC_011147.1 2133052 2134356 D similar to Salmonella typhi CT18 citrate-proton symporter; citrate-proton symporter 2133052..2134356 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142752.1 CDS SSPA1914 NC_011147.1 2134405 2134737 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(2134405..2134737) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142753.1 CDS SSPA1915 NC_011147.1 2134787 2136193 R similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein complement(2134787..2136193) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142754.1 CDS SSPA1916 NC_011147.1 2136854 2138521 R 'catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; glutaminyl-tRNA synthetase complement(2136854..2138521) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142755.1 CDS SSPA1917 NC_011147.1 2138732 2140684 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system N-acetyl glucosamine specific transporter subunit IIABC complement(2138732..2140684) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142756.1 CDS nagB NC_011147.1 2141011 2141811 D catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 2141011..2141811 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142757.1 CDS nagA NC_011147.1 2141871 2143025 D catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 2141871..2143025 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142758.1 CDS SSPA1920 NC_011147.1 2143030 2144250 D similar to Salmonella typhi CT18 N-acetylglucosamine repressor; N-acetylglucosamine repressor 2143030..2144250 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142759.1 CDS SSPA1921 NC_011147.1 2144297 2145049 D similar to Salmonella typhi CT18 NagD protein; UMP phosphatase 2144297..2145049 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142760.1 CDS asnB NC_011147.1 2145339 2147003 D 'functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP'; asparagine synthetase B 2145339..2147003 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142761.1 CDS ubiF NC_011147.1 2148066 2149241 R 'catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q'; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase complement(2148066..2149241) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142762.1 CDS SSPA1923 NC_011147.1 2149343 2150809 D catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 2149343..2150809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142763.1 CDS SSPA1924 NC_011147.1 2150975 2152060 D similar to Salmonella typhi Ty2 PhoH-like ATP-binding protein; PhoH-like ATP-binding protein 2150975..2152060 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142764.1 CDS SSPA1925 NC_011147.1 2152057 2152530 D similar to Salmonella typhi CT18 conserved hypothetical protein; metalloprotease 2152057..2152530 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142765.1 CDS SSPA1926 NC_011147.1 2152688 2153566 D similar to Salmonella typhi CT18 haemolysin-related protein; hemolysin-like protein 2152688..2153566 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142766.1 CDS lnt NC_011147.1 2153586 2155124 D Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 2153586..2155124 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142767.1 CDS SSPA1928 NC_011147.1 2155461 2156387 D similar to Salmonella typhi Ty2 ABC transporter periplasmic binding protein; glutamate and aspartate transporter subunit 2155461..2156387 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142768.1 CDS SSPA1929 NC_011147.1 2157287 2157961 D similar to Salmonella typhi CT18 glutamate/aspartate transport system permease protein GltK; glutamate/aspartate transport system permease GltK 2157287..2157961 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142769.1 CDS SSPA1930 NC_011147.1 2157961 2158686 D similar to Salmonella typhi CT18 glutamate/aspartate transport ATP-binding protein GltL; glutamate/aspartate transport ATP-binding protein GltL 2157961..2158686 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142770.1 CDS rihA NC_011147.1 2158803 2159738 D 'Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific'; ribonucleoside hydrolase 1 2158803..2159738 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142771.1 CDS SSPA1932 NC_011147.1 2159770 2160321 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2159770..2160321 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142772.1 CDS SSPA1933 NC_011147.1 2160609 2161082 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2160609..2161082) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142773.1 CDS SSPA1934 NC_011147.1 2161175 2163103 R similar to Salmonella typhi CT18 sigma-54 dependent transcriptional regulator; sigma-54 dependent transcriptional regulator complement(2161175..2163103) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142774.1 CDS SSPA1935 NC_011147.1 2163171 2164124 R transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease complement(2163171..2164124) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142775.1 CDS SSPA1936 NC_011147.1 2164174 2165346 R C-terminus; similar to Salmonella typhi CT18 hydrolase. C-terminus.; truncated hydrolase complement(2164174..2165346) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142776.1 CDS SSPA1937 NC_011147.1 2165363 2165704 R N-terminus; similar to Salmonella typhi CT18 hydrolase N-terminus; truncated hydrolase complement(2165363..2165704) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142777.1 CDS leuS NC_011147.1 2165941 2168523 D 'leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase'; leucyl-tRNA synthetase 2165941..2168523 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142778.1 CDS SSPA1939 NC_011147.1 2168538 2169128 D rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 2168538..2169128 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142779.1 CDS holA NC_011147.1 2169128 2170159 D required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 2169128..2170159 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142780.1 CDS nadD NC_011147.1 2170161 2170802 D transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 2170161..2170802 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142781.1 CDS SSPA1942 NC_011147.1 2170777 2171871 R 'cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase'; threonine-phosphate decarboxylase complement(2170777..2171871) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142782.1 CDS SSPA1943 NC_011147.1 2171968 2172576 D similar to Salmonella typhi CT18 alpha-ribazole-5'-phosphate phosphatase; alpha-ribazole-5'-phosphate phosphatase 2171968..2172576 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142783.1 CDS SSPA1944 NC_011147.1 2172904 2173221 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2172904..2173221 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142784.1 CDS SSPA1945 NC_011147.1 2173225 2173692 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2173225..2173692 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142785.1 CDS SSPA1946 NC_011147.1 2173723 2175624 D similar to Salmonella typhi Ty2 penicillin-binding protein 2; penicillin-binding protein 2 2173723..2175624 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142786.1 CDS SSPA1947 NC_011147.1 2175627 2176739 D similar to Salmonella typhi CT18 rod shape-determining protein RodA; cell wall shape-determining protein 2175627..2176739 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142787.1 CDS SSPA1948 NC_011147.1 2176750 2177883 D similar to Salmonella typhi CT18 rare lipoprotein A precursor; rare lipoprotein A 2176750..2177883 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142788.1 CDS SSPA1949 NC_011147.1 2178023 2179234 D penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase 2178023..2179234 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142789.1 CDS SSPA1950 NC_011147.1 2179342 2179605 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2179342..2179605 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142790.2 CDS lipB NC_011147.1 2179705 2180346 D lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 2179705..2180346 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142791.1 CDS SSPA1952 NC_011147.1 2180648 2181601 D similar to Salmonella typhi CT18 lysR-family transcriptional regulator; DNA-binding transcriptional regulator 2180648..2181601 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142792.1 CDS SSPA1953 NC_011147.1 2181807 2182772 D catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2181807..2182772 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142793.1 CDS tatE NC_011147.1 2182858 2183061 R TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein E complement(2182858..2183061) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142794.1 CDS SSPA1955 NC_011147.1 2183190 2183978 R similar to Salmonella typhimurium hydrolase; hydrolase complement(2183190..2183978) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142795.1 CDS SSPA1956 NC_011147.1 2184069 2184452 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2184069..2184452 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142796.1 CDS cspE NC_011147.1 2184510 2184719 R member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE complement(2184510..2184719) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142797.1 CDS pagP NC_011147.1 2184907 2185479 R catalyzes the transfer of palmitate to lipid A; palmitoyl transferase complement(2184907..2185479) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142798.2 CDS dcuC NC_011147.1 2185858 2187243 D responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 2185858..2187243 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142799.1 CDS dpiA NC_011147.1 2187297 2187977 R regulates the expression of citAB in citrate fermentation; two-component response regulator DpiA complement(2187297..2187977) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142800.1 CDS SSPA1961 NC_011147.1 2190043 2191068 D similar to Salmonella typhi CT18 [citrate (pro-3S)-lyase] ligase; [citrate (pro-3S)-lyase] ligase 2190043..2191068 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142801.1 CDS SSPA1962 NC_011147.1 2191065 2191361 D acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 2191065..2191361 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142802.1 CDS SSPA1963 NC_011147.1 2191358 2192266 D similar to Salmonella typhi CT18 citrate lyase beta chain; citrate lyase subunit beta 2191358..2192266 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142803.1 CDS SSPA1964 NC_011147.1 2192276 2193805 D similar to Salmonella typhi CT18 citrate lyase alpha chain; citrate lyase subunit alpha 2192276..2193805 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142804.2 CDS citX NC_011147.1 2193809 2194360 D 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 2193809..2194360 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142805.1 CDS citG NC_011147.1 2194332 2195228 D catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase 2194332..2195228 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142806.1 CDS SSPA1967 NC_011147.1 2195266 2196771 D similar to Salmonella typhi CT18 citrate carrier; citrate carrier 2195266..2196771 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142807.1 CDS SSPA1968 NC_011147.1 2196881 2197687 D similar to Salmonella typhi CT18 ribonuclease I precursor; ribonuclease I 2196881..2197687 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142808.1 CDS SSPA1969 NC_011147.1 2197922 2198332 D 'Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation'; nucleoside diphosphate kinase regulator 2197922..2198332 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142809.1 CDS SSPA1970 NC_011147.1 2199875 2200303 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2199875..2200303 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142810.1 CDS SSPA1971 NC_011147.1 2200371 2201138 R similar to Salmonella typhi CT18 molybdopterin-containing oxidoreductase membrane anchor subunit; molybdopterin-containing oxidoreductase membrane anchor subunit complement(2200371..2201138) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142811.1 CDS SSPA1972 NC_011147.1 2201138 2201695 R similar to Salmonella typhi CT18 molybdopterin-containing oxidoreductase iron-sulfur subunit; molybdopterin-containing oxidoreductase iron-sulfur subunit complement(2201138..2201695) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142812.1 CDS SSPA1973 NC_011147.1 2201692 2203920 R similar to Salmonella typhi CT18 molybdopterin-containing oxidoreductase catalytic subunit; molybdopterin-containing oxidoreductase catalytic subunit complement(2201692..2203920) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142813.1 CDS SSPA1974 NC_011147.1 2203964 2204524 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2203964..2204524) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142814.1 CDS SSPA1975 NC_011147.1 2204857 2206422 R similar to Salmonella typhi CT18 alkyl hydroperoxide reductase F52A protein (subunit F); alkyl hydroperoxide reductase subunit F complement(2204857..2206422) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142815.1 CDS SSPA1976 NC_011147.1 2206664 2207227 R with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase subunit C complement(2206664..2207227) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142816.1 CDS dsbG NC_011147.1 2207668 2208414 D Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase 2207668..2208414 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142817.1 CDS SSPA1978 NC_011147.1 2208731 2209633 D similar to Salmonella typhi CT18 lysR-family transcriptional regulator; lysR-family transcriptional regulator 2208731..2209633 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142818.1 CDS SSPA1979 NC_011147.1 2209799 2211034 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2209799..2211034 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142819.1 CDS SSPA1980 NC_011147.1 2211007 2211624 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2211007..2211624 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142820.1 CDS SSPA1981 NC_011147.1 2211625 2212785 R catalyzes the transfer of an amino moiety; aminotransferase complement(2211625..2212785) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142821.1 CDS SSPA1982 NC_011147.1 2212912 2214000 D member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 2212912..2214000 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142822.1 CDS SSPA1983 NC_011147.1 2214036 2214233 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2214036..2214233) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142823.1 CDS SSPA1984 NC_011147.1 2214297 2216402 R similar to Salmonella typhi CT18 carbon starvation protein A; carbon starvation protein A complement(2214297..2216402) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142824.1 CDS SSPA1985 NC_011147.1 2216584 2216997 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2216584..2216997) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142825.1 CDS SSPA1986 NC_011147.1 2217000 2217755 R 'catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin'; 2,3-dihydroxybenzoate-2,3-dehydrogenase complement(2217000..2217755) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142826.1 CDS SSPA1987 NC_011147.1 2217755 2218612 R similar to Salmonella typhi CT18 isochorismatase; isochorismatase complement(2217755..2218612) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142827.1 CDS entE NC_011147.1 2218626 2220239 R 'bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate'; enterobactin synthase subunit E complement(2218626..2220239) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142828.1 CDS SSPA1989 NC_011147.1 2220246 2221415 R similar to Salmonella typhi CT18 isochorismate synthase EntC; isochorismate synthase EntC complement(2220246..2221415) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142829.1 CDS SSPA1990 NC_011147.1 2221730 2222686 D with FepCDG is involved in the transport of ferric enterobactin; iron-enterobactin transporter periplasmic binding protein 2221730..2222686 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142830.1 CDS SSPA1991 NC_011147.1 2222749 2223993 R protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; enterobactin exporter EntS complement(2222749..2223993) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142831.1 CDS SSPA1992 NC_011147.1 2224104 2225111 D with FepBCG is involved in the transport of ferric enterobactin; iron-enterobactin transporter membrane protein 2224104..2225111 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142832.1 CDS SSPA1993 NC_011147.1 2225111 2226100 D with FepBCD is involved in the transport of ferric enterobactin; iron-enterobactin transporter permease 2225111..2226100 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142833.1 CDS SSPA1994 NC_011147.1 2226097 2226891 D with FepBDE is involved in the transport of ferric enterobactin; iron-enterobactin transporter ATP-binding protein 2226097..2226891 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142834.1 CDS SSPA1995 NC_011147.1 2226944 2228080 R part of the ferric enterobactin transport system; necessary for enetrobactin uptake; ferric enterobactin transport protein FepE complement(2226944..2228080) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142835.1 CDS entF NC_011147.1 2228330 2232214 R 'with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin'; enterobactin synthase subunit F complement(2228330..2232214) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142836.1 CDS SSPA1997 NC_011147.1 2232211 2232429 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2232211..2232429) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142837.1 CDS SSPA1998 NC_011147.1 2232460 2233674 R similar to Salmonella typhi CT18 enterochelin esterase; enterobactin/ferric enterobactin esterase complement(2232460..2233674) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142838.1 CDS SSPA1999 NC_011147.1 2233863 2236118 D Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 2233863..2236118 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142839.1 CDS SSPA2000 NC_011147.1 2236165 2236869 D similar to Salmonella typhi CT18 enterobactin synthetase component D; enterobactin synthase multienzyme complex phosphopantetheinyltransferase 2236165..2236869 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142840.1 CDS SSPA2001 NC_011147.1 2236881 2237999 D ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase 2236881..2237999 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142841.1 CDS SSPA2002 NC_011147.1 2238320 2238661 R similar to Salmonella typhi CT18 transcriptional activator RamA; transcriptional activator RamA complement(2238320..2238661) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142842.1 CDS SSPA2003 NC_011147.1 2238950 2239531 D similar to Salmonella typhi CT18 tetR-family transcriptional regulator; TetR family regulatory protein 2238950..2239531 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142843.1 CDS SSPA2004 NC_011147.1 2239531 2239899 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2239531..2239899 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142844.1 CDS SSPA2005 NC_011147.1 2239996 2240649 D 'catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive'; dihydropteridine reductase 2239996..2240649 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142845.1 CDS SSPA2006 NC_011147.1 2240916 2242886 R similar to Salmonella typhi CT18 outer membrane esterase; outer membrane esterase complement(2240916..2242886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142846.1 CDS SSPA2007 NC_011147.1 2243197 2244444 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2243197..2244444 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142847.1 CDS SSPA2008 NC_011147.1 2244486 2245880 R similar to Salmonella typhi CT18 phenylalanine-specific permease; phenylalanine transporter complement(2244486..2245880) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142848.1 CDS SSPA2009 NC_011147.1 2246206 2247381 D similar to Salmonella typhimurium ATPase involved in DNA repair; DNA repair ATPase 2246206..2247381 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142849.1 CDS SSPA2010 NC_011147.1 2247460 2248020 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2247460..2248020) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142850.1 CDS SSPA2011 NC_011147.1 2248033 2248269 R similar to Salmonella typhi CT18 hypothetical secreted protein; hypothetical protein complement(2248033..2248269) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142851.1 CDS SSPA2012 NC_011147.1 2248426 2249751 R Involved in disulfide oxidoreductase activity and electron transport; pyridine nucleotide-disulfide oxidoreductase complement(2248426..2249751) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142852.2 CDS SSPA2013 NC_011147.1 2249967 2250821 D similar to Salmonella typhi CT18 hypothetical araC-family transcriptional regulator; hypothetical protein 2249967..2250821 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142853.1 CDS SSPA2015 NC_011147.1 2251382 2251627 D similar to Salmonella typhi CT18 possible copper-binding protein; copper-binding protein 2251382..2251627 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142854.1 CDS SSPA2016 NC_011147.1 2252030 2252392 D similar to Salmonella typhi Ty2 bactoprenol-linked glucose translocase; bactoprenol-linked glucose translocase 2252030..2252392 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142855.1 CDS SSPA2017 NC_011147.1 2252389 2253315 D similar to Salmonella typhi Ty2 bactoprenol glucosyltransferase; bactoprenol glucosyltransferase 2252389..2253315 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142856.1 CDS SSPA2019 NC_011147.1 2256448 2257044 D similar to Salmonella typhi CT18 fimbriae w protein; fimbriae w protein 2256448..2257044 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142857.1 CDS SSPA2020 NC_011147.1 2257209 2257517 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2257209..2257517 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142858.2 CDS SSPA2021 NC_011147.1 2257536 2258258 D similar to Salmonella typhi CT18 fimbriae Y protein; fimbriae Y protein 2257536..2258258 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142859.1 CDS SSPA2022 NC_011147.1 2258862 2259494 D activates the production of the major fimbrae protein FimA; transcriptional regulator FimZ 2258862..2259494 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142860.1 CDS SSPA2023 NC_011147.1 2259540 2260058 R similar to Salmonella typhi CT18 fimbria-like protein FimF precursor; fimbrial protein complement(2259540..2260058) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142861.1 CDS SSPA2024 NC_011147.1 2260068 2261075 R similar to Salmonella typhi CT18 FimH protein precursor; FimH protein complement(2260068..2261075) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142862.1 CDS SSPA2025 NC_011147.1 2261090 2263702 R similar to Salmonella typhi CT18 outer membrane usher protein FimD precursor; outer membrane usher protein FimD complement(2261090..2263702) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142863.1 CDS SSPA2026 NC_011147.1 2263733 2264425 R similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein complement(2263733..2264425) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142864.1 CDS SSPA2027 NC_011147.1 2264469 2265002 R similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein complement(2264469..2265002) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142865.1 CDS SSPA2028 NC_011147.1 2265077 2265634 R 'similar to Salmonella typhi CT18 type-1 fimbrial protein, a chain precursor'; type-1 fimbrial protein, a chain complement(2265077..2265634) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142866.1 CDS SSPA2029 NC_011147.1 2266169 2267035 D 'catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate'; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 2266169..2267035 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142867.1 CDS SSPA2030 NC_011147.1 2267037 2267249 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2267037..2267249 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142868.1 CDS SSPA2031 NC_011147.1 2267377 2267925 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2267377..2267925 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142869.1 CDS cysS NC_011147.1 2268016 2269401 R catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase complement(2268016..2269401) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142870.1 CDS SSPA2033 NC_011147.1 2269574 2270068 D similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl cis-trans isomerase B 2269574..2270068 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142871.1 CDS SSPA2034 NC_011147.1 2270071 2270793 D 'catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine'; UDP-2,3-diacylglucosamine hydrolase 2270071..2270793 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142872.1 CDS SSPA2035 NC_011147.1 2270911 2271420 D similar to Salmonella typhi CT18 phosphoribosylaminoimidazole carboxylase catalytic subunit; phosphoribosylaminoimidazole carboxylase catalytic subunit 2270911..2271420 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142873.1 CDS SSPA2036 NC_011147.1 2271417 2272484 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 2271417..2272484 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142874.1 CDS SSPA2037 NC_011147.1 2272525 2273418 R similar to Salmonella typhi CT18 carbamate kinase; carbamate kinase complement(2272525..2273418) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142875.1 CDS SSPA2038 NC_011147.1 2273422 2274231 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2273422..2274231) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142876.1 CDS SSPA2039 NC_011147.1 2274243 2275502 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2274243..2275502) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142877.1 CDS SSPA2040 NC_011147.1 2277401 2278450 D similar to Salmonella typhi CT18 ureidoglycolate dehydrogenase; ureidoglycolate dehydrogenase 2277401..2278450 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142878.1 CDS SSPA2041 NC_011147.1 2278472 2279707 D 'allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide'; allantoate amidohydrolase 2278472..2279707 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142879.1 CDS SSPA2042 NC_011147.1 2279718 2280503 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2279718..2280503 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142880.1 CDS SSPA2043 NC_011147.1 2280583 2281731 R similar to Salmonella typhi CT18 glycerate kinase; glycerate kinase complement(2280583..2281731) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142881.1 CDS SSPA2044 NC_011147.1 2281754 2283052 R similar to Salmonella typhi CT18 permease protein; purine permease YbbY complement(2281754..2283052) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142882.1 CDS SSPA2045 NC_011147.1 2283111 2284472 R Plays a crucial role on both purine and pyrimidine metabolism; allantoinase complement(2283111..2284472) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142883.1 CDS SSPA2046 NC_011147.1 2286101 2287348 R similar to Salmonella typhi CT18 probable metabolite transport protein; metabolite transport protein complement(2286101..2287348) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142884.1 CDS SSPA2047 NC_011147.1 2287414 2288292 R 2-hydroxy-3-oxopropionate reductase complement(2287414..2288292) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142885.1 CDS SSPA2048 NC_011147.1 2288392 2289168 R similar to Salmonella typhi Ty2 hydroxypyruvate isomerase; hydroxypyruvate isomerase complement(2288392..2289168) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142886.1 CDS SSPA2049 NC_011147.1 2289181 2290962 R catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase complement(2289181..2290962) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142887.1 CDS SSPA2050 NC_011147.1 2291047 2291865 R regulates operons involved in the utilization of allantoin; DNA-binding transcriptional repressor AllR complement(2291047..2291865) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142888.1 CDS SSPA2051 NC_011147.1 2291944 2292426 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(2291944..2292426) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142889.1 CDS SSPA2052 NC_011147.1 2292653 2293579 D activator of the allDC-ylbA operon involved in allantoin utilization; DNA-binding transcriptional activator AllS 2292653..2293579 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142890.1 CDS SSPA2053 NC_011147.1 2293649 2294743 D catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 2293649..2294743 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142891.1 CDS SSPA2054 NC_011147.1 2294782 2295441 R similar to Salmonella typhi CT18 ABC transporter integral membrane protein; ABC transporter complement(2294782..2295441) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142892.1 CDS SSPA2055 NC_011147.1 2295434 2296450 R similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(2295434..2296450) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142893.1 CDS SSPA2056 NC_011147.1 2296487 2297317 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(2296487..2297317) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142894.1 CDS SSPA2057 NC_011147.1 2297574 2298707 R similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein complement(2297574..2298707) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142895.1 CDS SSPA2058 NC_011147.1 2298893 2301307 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2298893..2301307) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142896.1 CDS SSPA2059 NC_011147.1 2301304 2301990 R similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(2301304..2301990) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142897.1 CDS SSPA2060 NC_011147.1 2301961 2302575 D similar to Salmonella typhi CT18 acyl-coA thioesterase I; multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1 2301961..2302575 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142898.1 CDS SSPA2061 NC_011147.1 2302730 2303500 D similar to Salmonella typhi CT18 hypothetical oxidoreductase; short chain dehydrogenase 2302730..2303500 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142899.1 CDS SSPA2062 NC_011147.1 2303560 2304414 D similar to Salmonella typhi CT18 thioredoxin-like protein; thioredoxin-like protein 2303560..2304414 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142900.1 CDS SSPA2063 NC_011147.1 2304500 2305279 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2304500..2305279) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142901.1 CDS SSPA2064 NC_011147.1 2305266 2305943 R similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein complement(2305266..2305943) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142902.1 CDS SSPA2065 NC_011147.1 2306824 2307276 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2306824..2307276 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142903.1 CDS SSPA2066 NC_011147.1 2307277 2307693 R activator of copper-responsive regulon genes; DNA-binding transcriptional regulator CueR complement(2307277..2307693) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142904.1 CDS copA NC_011147.1 2307803 2310304 D similar to Salmonella typhi Ty2 copper-transporting ATPase; copper exporting ATPase 2307803..2310304 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142905.1 CDS SSPA2068 NC_011147.1 2310458 2311237 D similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2310458..2311237 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142906.1 CDS SSPA2069 NC_011147.1 2311371 2312165 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2311371..2312165 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142907.1 CDS SSPA2070 NC_011147.1 2312367 2312846 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2312367..2312846 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142908.1 CDS ushA NC_011147.1 2312963 2314615 R 'catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides'; bifunctional UDP-sugar hydrolase/5'-nucleotidase complement(2312963..2314615) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142909.1 CDS SSPA2072 NC_011147.1 2314787 2316007 D similar to Salmonella typhi CT18 fosmidomycin resistance protein; fosmidomycin resistance protein 2314787..2316007 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142910.1 CDS SSPA2073 NC_011147.1 2316222 2317898 D YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein 2316222..2317898 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142911.1 CDS SSPA2074 NC_011147.1 2317947 2319251 R similar to Salmonella typhi CT18 inosine-guanosine kinase; inosine-guanosine kinase complement(2317947..2319251) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142912.1 CDS SSPA2075 NC_011147.1 2319404 2320375 D similar to Salmonella typhi CT18 acetyl esterase; acetyl esterase 2319404..2320375 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142913.1 CDS hemH NC_011147.1 2320372 2321334 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(2320372..2321334) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142914.1 CDS adk NC_011147.1 2321564 2322208 R essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase complement(2321564..2322208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142915.1 CDS SSPA2078 NC_011147.1 2322855 2324753 R molecular chaperone; heat shock protein 90 complement(2322855..2324753) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142916.1 CDS recR NC_011147.1 2324840 2325445 R 'involved in a recombinational process of DNA repair, independent of the recBC complex'; recombination protein RecR complement(2324840..2325445) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142917.1 CDS SSPA2080 NC_011147.1 2325445 2325774 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2325445..2325774) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142918.1 CDS SSPA2081 NC_011147.1 2325820 2327748 R 'catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA'; DNA polymerase III subunits gamma and tau complement(2325820..2327748) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142919.1 CDS SSPA2082 NC_011147.1 2327862 2328413 R catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase complement(2327862..2328413) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142920.1 CDS ybaN NC_011147.1 2328566 2328943 R hypothetical protein complement(2328566..2328943) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142921.1 CDS SSPA2084 NC_011147.1 2329012 2329539 D 'PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks'; primosomal replication protein N'' 2329012..2329539 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142922.1 CDS SSPA2085 NC_011147.1 2329553 2329720 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2329553..2329720 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142923.1 CDS SSPA2086 NC_011147.1 2329790 2330713 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2329790..2330713 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142924.1 CDS SSPA2087 NC_011147.1 2330755 2334117 R small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA complement(2330755..2334117) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142925.1 CDS SSPA2088 NC_011147.1 2334236 2334889 R regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR complement(2334236..2334889) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142926.1 CDS SSPA2089 NC_011147.1 2335031 2336224 D similar to Salmonella typhi CT18 acriflavin resistance protein A precursor; acriflavin resistance protein A 2335031..2336224 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142927.1 CDS SSPA2090 NC_011147.1 2336247 2339396 D similar to Salmonella typhi CT18 acriflavin resistance protein B; acriflavin resistance protein B 2336247..2339396 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142928.1 CDS SSPA2091 NC_011147.1 2339892 2340266 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2339892..2340266 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142929.1 CDS SSPA2092 NC_011147.1 2340294 2340512 D with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 2340294..2340512 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142930.1 CDS SSPA2093 NC_011147.1 2340691 2341242 D similar to Salmonella typhi Ty2 maltose O-acetyltransferase; maltose O-acetyltransferase 2340691..2341242 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142931.1 CDS SSPA2094 NC_011147.1 2341358 2341828 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2341358..2341828 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142932.1 CDS rpmJ NC_011147.1 2341884 2342024 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 complement(2341884..2342024) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142933.1 CDS rpmE2 NC_011147.1 2342030 2342290 R 'RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome'; 50S ribosomal protein L31 complement(2342030..2342290) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142934.1 CDS SSPA2097 NC_011147.1 2342515 2344065 D similar to Salmonella typhi CT18 hypothetical 58.9 kDa protein in tesb-hha intergenic region. Contains probable N-terminal signal sequence; hypothetical protein 2342515..2344065 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142935.1 CDS SSPA2098 NC_011147.1 2344296 2344685 D similar to Salmonella typhi CT18 methylated-DNA methyltransferase; methylated-DNA methyltransferase 2344296..2344685 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142936.1 CDS SSPA2099 NC_011147.1 2344718 2345287 R similar to Salmonella typhi CT18 conserved hypothetical lipoprotein; hypothetical protein complement(2344718..2345287) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142937.1 CDS SSPA2100 NC_011147.1 2345502 2346362 D similar to Salmonella typhi CT18 acyl-CoA thioesterase II; Pseudogene in Paratyphi A straina ATCC9150 (SPA2258) due to N-terminal truncation; acyl-CoA thioesterase II 2345502..2346362 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142938.1 CDS SSPA2101 NC_011147.1 2346462 2347748 R similar to Salmonella typhi CT18 probable ammonium transporter; ammonium transporter complement(2346462..2347748) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142939.1 CDS SSPA2102 NC_011147.1 2347780 2348118 R 'indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.'; nitrogen regulatory protein P-II 2 complement(2347780..2348118) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142940.1 CDS SSPA2103 NC_011147.1 2348331 2350073 R similar to Salmonella typhi CT18 ABC transporter ATP-binding membrane protein; multidrug transporter membrane ATP-binding protein complement(2348331..2350073) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142941.1 CDS SSPA2104 NC_011147.1 2350105 2351877 R similar to Salmonella typhi CT18 ABC transporter ATP-binding membrane protein; multidrug transporter membrane ATP-binding protein complement(2350105..2351877) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142942.1 CDS SSPA2105 NC_011147.1 2351918 2352376 R similar to Salmonella typhi CT18 hypothetical transcriptional regulator; hypothetical protein complement(2351918..2352376) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142943.1 CDS SSPA2106 NC_011147.1 2352489 2353544 D similar to Salmonella typhi CT18 lyase; lyase 2352489..2353544 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142944.1 CDS SSPA2107 NC_011147.1 2353594 2354412 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2353594..2354412) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142945.2 CDS SSPA2108 NC_011147.1 2354513 2356213 D similar to Salmonella typhi CT18 solute-binding protein; solute-binding protein 2354513..2356213 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142946.1 CDS SSPA2109 NC_011147.1 2356278 2356973 D 'YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His'; queuosine biosynthesis protein QueC 2356278..2356973 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142947.1 CDS SSPA2110 NC_011147.1 2357079 2357477 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2357079..2357477) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142948.1 CDS SSPA2111 NC_011147.1 2357581 2357955 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(2357581..2357955) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142949.1 CDS SSPA2112 NC_011147.1 2358105 2359976 R similar to Salmonella typhi Ty2 peptidyl-prolyl cis-trans isomerase D; peptidyl-prolyl cis-trans isomerase D complement(2358105..2359976) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142950.1 CDS SSPA2113 NC_011147.1 2360267 2360539 R histone-like DNA-binding protein; transcriptional regulator HU subunit beta complement(2360267..2360539) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142951.1 CDS SSPA2114 NC_011147.1 2360748 2363102 R similar to Salmonella typhi CT18 Lon protease; DNA-binding ATP-dependent protease La complement(2360748..2363102) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142952.1 CDS clpX NC_011147.1 2363288 2364559 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(2363288..2364559) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142953.1 CDS clpP NC_011147.1 2364811 2365434 R 'hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates'; ATP-dependent Clp protease proteolytic subunit complement(2364811..2365434) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142954.1 CDS tig NC_011147.1 2365681 2366979 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(2365681..2366979) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142955.1 CDS SSPA2118 NC_011147.1 2367326 2367643 R 'positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress'; transcriptional regulator BolA complement(2367326..2367643) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142956.1 CDS SSPA2119 NC_011147.1 2367947 2368525 D similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 2367947..2368525 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142957.1 CDS ampG NC_011147.1 2368569 2370044 D in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 2368569..2370044 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142958.1 CDS SSPA2121 NC_011147.1 2370497 2371453 D similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase subunit II; cytochrome o ubiquinol oxidase subunit II 2370497..2371453 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142959.1 CDS SSPA2122 NC_011147.1 2371464 2373455 D similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 2371464..2373455 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142960.2 CDS SSPA2123 NC_011147.1 2373445 2374059 D similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 2373445..2374059 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142961.1 CDS SSPA2124 NC_011147.1 2374059 2374388 D similar to Salmonella typhi CT18 cytochrome o ubiquinol oxidase C subunit; cytochrome o ubiquinol oxidase subunit IV 2374059..2374388 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142962.1 CDS SSPA2125 NC_011147.1 2374400 2375290 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 2374400..2375290 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142963.2 CDS SSPA2126 NC_011147.1 2375338 2376807 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2375338..2376807) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142964.1 CDS SSPA2127 NC_011147.1 2376819 2378330 R similar to Salmonella typhimurium periplasmic protein; hypothetical protein complement(2376819..2378330) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142965.1 CDS SSPA2128 NC_011147.1 2378505 2378639 D similar to Salmonella typhimurium transposase; transposase 2378505..2378639 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142966.1 CDS SSPA2129 NC_011147.1 2378867 2380231 D similar to Salmonella typhi Ty2 hypothetical major facilitator family transport protein; hypothetical protein 2378867..2380231 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142967.1 CDS SSPA2130 NC_011147.1 2380278 2380787 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(2380278..2380787) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142968.1 CDS SSPA2131 NC_011147.1 2380895 2381806 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 2380895..2381806 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142969.1 CDS SSPA2132 NC_011147.1 2381769 2382359 D similar to Salmonella typhi CT18 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (ThiJ) protein; DJ-1 family protein 2381769..2382359 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142970.1 CDS SSPA2133 NC_011147.1 2382456 2383265 R catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase complement(2382456..2383265) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142971.1 CDS SSPA2134 NC_011147.1 2383275 2384378 R catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate; 2-aminoethylphosphonate--pyruvate transaminase complement(2383275..2384378) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142972.1 CDS SSPA2135 NC_011147.1 2384518 2385237 D similar to Salmonella typhi CT18 probable regulator of 2-aminoethylphosphonate uptake and metabolism operon; regulator of 2-aminoethylphosphonate uptake and metabolism operon 2384518..2385237 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142973.2 CDS SSPA2136 NC_011147.1 2385435 2386448 D similar to Salmonella typhi CT18 probable periplasmic binding component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter substrate-binding protein 2385435..2386448 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142974.1 CDS SSPA2137 NC_011147.1 2386454 2387563 D similar to Salmonella typhi CT18 probable ATP-binding component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter ATP-binding protein 2386454..2387563 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142975.1 CDS SSPA2138 NC_011147.1 2387566 2388435 D similar to Salmonella typhi CT18 probable membrane component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter membrane protein 2387566..2388435 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142976.1 CDS SSPA2139 NC_011147.1 2388429 2389226 D similar to Salmonella typhi CT18 probable membrane component of 2-aminoethylphosphonate transporter; 2-aminoethylphosphonate transporter membrane protein 2388429..2389226 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142977.1 CDS SSPA2140 NC_011147.1 2389270 2390718 R Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI complement(2389270..2390718) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142978.1 CDS SSPA2141 NC_011147.1 2390928 2391170 D catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 2390928..2391170 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142979.1 CDS SSPA2142 NC_011147.1 2391171 2392070 D similar to Salmonella typhi CT18 geranyltranstransferase; geranyltranstransferase 2391171..2392070 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142980.1 CDS SSPA2143 NC_011147.1 2392094 2393956 D catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 2392094..2393956 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142981.1 CDS SSPA2144 NC_011147.1 2394013 2394987 D similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase 2394013..2394987 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142982.1 CDS SSPA2145 NC_011147.1 2395091 2395606 R hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A complement(2395091..2395606) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142983.1 CDS SSPA2146 NC_011147.1 2395584 2396561 R catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase complement(2395584..2396561) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142984.1 CDS nusB NC_011147.1 2396640 2397059 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(2396640..2397059) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142985.1 CDS ribH NC_011147.1 2397080 2397550 R 'RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not'; 6,7-dimethyl-8-ribityllumazine synthase complement(2397080..2397550) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142986.1 CDS ribD NC_011147.1 2397639 2398742 R 'riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil'; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase complement(2397639..2398742) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142987.1 CDS nrdR NC_011147.1 2398746 2399195 R similar to Salmonella typhi Ty2 hypothetical protein; transcriptional regulator NrdR complement(2398746..2399195) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142988.1 CDS SSPA2151 NC_011147.1 2399347 2399886 D similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 2399347..2399886 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142989.1 CDS SSPA2152 NC_011147.1 2400186 2401049 D similar to Salmonella typhi CT18 nucleoside-specific channel-forming protein tsx precursor; nucleoside-specific channel-forming protein tsx 2400186..2401049 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142990.1 CDS SSPA2153 NC_011147.1 2401104 2401430 D hypothetical protein 2401104..2401430 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142991.1 CDS yajD NC_011147.1 2401433 2401660 R hypothetical protein complement(2401433..2401660) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142992.1 CDS SSPA2155 NC_011147.1 2401678 2402025 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2401678..2402025) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142993.1 CDS SSPA2156 NC_011147.1 2402195 2402887 R similar to Salmonella typhi CT18 deoR-family transcriptional regulator; deoR-family transcriptional regulator complement(2402195..2402887) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142994.1 CDS SSPA2157 NC_011147.1 2402913 2403278 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2402913..2403278) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142995.1 CDS secF NC_011147.1 2403423 2404337 R 'forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF'; preprotein translocase subunit SecF complement(2403423..2404337) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142996.2 CDS secD NC_011147.1 2404405 2406252 R 'part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane'; preprotein translocase subunit SecD complement(2404405..2406252) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142997.1 CDS yajC NC_011147.1 2406280 2406612 R member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC complement(2406280..2406612) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142998.1 CDS tgt NC_011147.1 2406635 2407762 R 'Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)'; queuine tRNA-ribosyltransferase complement(2406635..2407762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002142999.1 CDS queA NC_011147.1 2407959 2409023 R Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(2407959..2409023) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143000.1 CDS SSPA2163 NC_011147.1 2409117 2409698 D Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; acyl carrier protein phosphodiesterase 2409117..2409698 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143001.1 CDS SSPA2164 NC_011147.1 2409908 2410510 D similar to Salmonella typhi CT18 probable peroxidase; peroxidase 2409908..2410510 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143002.1 CDS SSPA2165 NC_011147.1 2410582 2412399 R similar to Salmonella typhi CT18 maltodextrin glucosidase; maltodextrin glucosidase complement(2410582..2412399) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143003.1 CDS proY NC_011147.1 2412561 2413931 R 'cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation'; proline-specific permease complement(2412561..2413931) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143004.1 CDS SSPA2167 NC_011147.1 2414006 2415325 R similar to Salmonella typhi CT18 branched chain amino acid transport system II carrier protein; branched chain amino acid transport system II carrier protein complement(2414006..2415325) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143005.1 CDS phoR NC_011147.1 2415734 2417029 R membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein complement(2415734..2417029) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143006.1 CDS SSPA2169 NC_011147.1 2417099 2417740 R similar to Salmonella typhi CT18 phosphate regulon transcriptional regulatory protein PhoB; phosphate regulon transcriptional regulatory protein PhoB complement(2417099..2417740) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143007.1 CDS SSPA2170 NC_011147.1 2418002 2419204 D 'with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity'; exonuclease subunit SbcD 2418002..2419204 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143008.1 CDS SSPA2171 NC_011147.1 2419201 2422341 D with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity; exonuclease subunit SbcC 2419201..2422341 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143009.1 CDS SSPA2172 NC_011147.1 2422514 2423686 D member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; MFS transport protein AraJ 2422514..2423686 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143010.1 CDS SSPA2173 NC_011147.1 2423706 2424614 R catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase complement(2423706..2424614) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143011.2 CDS SSPA2174 NC_011147.1 2424740 2425651 D similar to Salmonella typhi CT18 recombination associated protein RdgC; recombination associated protein RdgC 2424740..2425651 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143012.1 CDS SSPA2175 NC_011147.1 2425694 2425978 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2425694..2425978) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143013.1 CDS SSPA2176 NC_011147.1 2426049 2426726 R 'similar to Salmonella typhimurium protein of aro operon, regulated by aroR'; hypothetical protein complement(2426049..2426726) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143014.1 CDS SSPA2177 NC_011147.1 2426977 2427168 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2426977..2427168) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143015.1 CDS aroL NC_011147.1 2427195 2427740 R type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(2427195..2427740) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143016.1 CDS SSPA2179 NC_011147.1 2427925 2428380 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2427925..2428380) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143017.1 CDS SSPA2180 NC_011147.1 2428520 2429329 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 2428520..2429329 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143018.1 CDS adrA NC_011147.1 2429344 2430456 R 'catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis'; diguanylate cyclase AdrA complement(2429344..2430456) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143019.1 CDS SSPA2182 NC_011147.1 2430548 2430868 R similar to Salmonella typhi CT18 phosphate starvation-inducible protein PsiF; hypothetical protein complement(2430548..2430868) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143020.1 CDS SSPA2183 NC_011147.1 2431217 2431477 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2431217..2431477) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143021.1 CDS SSPA2184 NC_011147.1 2431774 2432985 R similar to Salmonella typhi CT18 possible efflux pump; efflux pump protein complement(2431774..2432985) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143022.1 CDS SSPA2185 NC_011147.1 2433154 2433867 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2433154..2433867) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143023.1 CDS SSPA2186 NC_011147.1 2435059 2435274 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2435059..2435274) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143024.1 CDS SSPA2187 NC_011147.1 2435542 2435850 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2435542..2435850 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143025.1 CDS SSPA2188 NC_011147.1 2435888 2436982 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(2435888..2436982) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143026.2 CDS SSPA2189 NC_011147.1 2436997 2438217 R 'in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope'; transporter complement(2436997..2438217) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143027.1 CDS SSPA2190 NC_011147.1 2438564 2439721 D this protein has no known enzymatic function; beta-lactam binding protein AmpH 2438564..2439721 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143028.1 CDS SSPA2191 NC_011147.1 2439766 2440389 R similar to Salmonella typhi CT18 conserved hypothetical protein; DNA-binding transcriptional regulator complement(2439766..2440389) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143029.1 CDS SSPA2192 NC_011147.1 2440475 2443420 R similar to Escherichia coli K12 flagellin structural protein; flagellin structural protein complement(2440475..2443420) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143030.1 CDS SSPA2193 NC_011147.1 2443933 2444907 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2443933..2444907 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143031.1 CDS prpE NC_011147.1 2445011 2446897 R 'catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent'; propionyl-CoA synthetase complement(2445011..2446897) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143032.1 CDS prpD NC_011147.1 2446938 2448389 R 'functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C'; 2-methylcitrate dehydratase complement(2446938..2448389) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143033.1 CDS SSPA2196 NC_011147.1 2448429 2449598 R catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase complement(2448429..2449598) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143034.1 CDS prpB NC_011147.1 2449721 2450608 R catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase complement(2449721..2450608) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143035.1 CDS SSPA2198 NC_011147.1 2450874 2452499 D similar to Salmonella typhi CT18 propionate catabolism operon regulatory protein; propionate catabolism operon regulatory protein 2450874..2452499 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143036.1 CDS SSPA2199 NC_011147.1 2452635 2452910 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(2452635..2452910) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143037.1 CDS SSPA2200 NC_011147.1 2453142 2453774 D similar to Salmonella typhi CT18 RhtC-like transporter; RhtC-like transporter 2453142..2453774 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143038.1 CDS SSPA2201 NC_011147.1 2453815 2455905 R similar to Salmonella typhi CT18 ferrioxamine B receptor precursor; ferrioxamine B receptor complement(2453815..2455905) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143039.1 CDS SSPA2202 NC_011147.1 2456069 2457073 R similar to Salmonella typhi CT18 AraC-family transcriptional regulator; araC family transcriptional regulator complement(2456069..2457073) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143040.1 CDS SSPA2203 NC_011147.1 2457412 2458422 R similar to Salmonella typhi CT18 probable terminal oxidase subunit II; terminal oxidase subunit II complement(2457412..2458422) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143041.1 CDS SSPA2204 NC_011147.1 2458419 2459822 R similar to Salmonella typhi CT18 probable terminal oxidase subunit I; terminal oxidase subunit I complement(2458419..2459822) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143042.1 CDS SSPA2205 NC_011147.1 2459939 2460040 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2459939..2460040) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143043.1 CDS SSPA2206 NC_011147.1 2460317 2463286 R similar to Salmonella typhimurium DNA restriction (DNA helicase; DNA restriction helicase complement(2460317..2463286) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143044.1 CDS SSPA2207 NC_011147.1 2463299 2465257 R similar to Salmonella typhi CT18 type III restriction-modification system StyLTI enzyme mod; type III restriction-modification system StyLTI enzyme mod complement(2463299..2465257) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143045.1 CDS SSPA2208 NC_011147.1 2465446 2466699 R similar to Salmonella typhi CT18 metabolite transport protein; metabolite transport protein complement(2465446..2466699) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143046.1 CDS SSPA2209 NC_011147.1 2466893 2467360 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2466893..2467360 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143047.1 CDS SSPA2210 NC_011147.1 2467942 2468301 R similar to Salmonella typhi CT18 probable lipoprotein; lipoprotein complement(2467942..2468301) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143048.1 CDS SSPA2211 NC_011147.1 2468359 2468583 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(2468359..2468583) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143049.2 CDS SSPA2212 NC_011147.1 2468594 2469235 R similar to Salmonella typhi CT18 possible transcriptionl regulator; transcriptional regulator complement(2468594..2469235) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143050.1 CDS SSPA2213 NC_011147.1 2469379 2469903 R similar to Salmonella typhi CT18 possible outer membrane protein; outer membrane protein complement(2469379..2469903) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143051.1 CDS SSPA2213a NC_011147.1 2470304 2470792 R hypothetical protein complement(2470304..2470792) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143052.1 CDS SSPA2214 NC_011147.1 2470825 2471508 R similar to Salmonella typhi CT18 possible transmembrane regulator; transmembrane regulator complement(2470825..2471508) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143053.1 CDS SSPA2215 NC_011147.1 2471608 2473158 R similar to Salmonella typhi CT18 rtn protein; rtn protein complement(2471608..2473158) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143054.1 CDS SSPA2216 NC_011147.1 2473484 2473984 R hypothetical protein complement(2473484..2473984) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143055.1 CDS SSPA2217 NC_011147.1 2473957 2474691 R similar to Salmonella typhi CT18 possible transmembrane regulator; transmembrane regulator complement(2473957..2474691) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143056.1 CDS SSPA2218 NC_011147.1 2475355 2475891 D similar to Salmonella typhi CT18 probable fimbrial protein; fimbrial protein 2475355..2475891 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143057.1 CDS SSPA2219 NC_011147.1 2475953 2476714 D similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 2475953..2476714 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143058.1 CDS SSPA2220 NC_011147.1 2476698 2479259 D similar to Salmonella typhi CT18 outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 2476698..2479259 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143059.1 CDS SSPA2221 NC_011147.1 2479264 2480589 D similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein 2479264..2480589 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143060.1 CDS SSPA2222 NC_011147.1 2480555 2481313 D similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 2480555..2481313 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143061.1 CDS SSPA2223 NC_011147.1 2481360 2481758 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(2481360..2481758) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143062.1 CDS gtrA NC_011147.1 2482316 2482678 D bactoprenol-linked glucose translocase 2482316..2482678 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143063.1 CDS SSPA2225 NC_011147.1 2482675 2483607 D O-antigen conversion: bactoprenyl transferase 2482675..2483607 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143064.1 CDS SSPA2226 NC_011147.1 2483597 2485054 D similar to |21914419|gb|AAM81384.1| GtrC [Bacteriophage P22-pbi]; O-antigen conversion: translocase 2483597..2485054 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143065.1 CDS SSPA2227 NC_011147.1 2485113 2487116 R similar to |9635551|ref|NP_059644.1| endorhamnosidase [Enterobacteria phage P22]; tailspike complement(2485113..2487116) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143066.1 CDS SSPA2228 NC_011147.1 2487252 2487500 D similar to |9635548|ref|NP_059641.1| regulatory protein [Enterobacteria phage P22]; regulatory 2487252..2487500 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143067.1 CDS SSPA2229 NC_011147.1 2487953 2489884 R similar to |41057291|ref|NP_958189.1| gene 13 protein [Enterobacteria phage Sf6]; DNA transfer protein complement(2487953..2489884) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143068.1 CDS SSPA2230 NC_011147.1 2489884 2491221 R similar to |9635545|ref|NP_059637.1| unknown protein [Enterobacteria phage P22]; DNA transfer protein complement(2489884..2491221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143069.1 CDS SSPA2231 NC_011147.1 2491264 2491953 R similar to |41057289|ref|NP_958187.1| gene 11 protein [Enterobacteria phage Sf6]; DNA transfer protein complement(2491264..2491953) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143070.1 CDS SSPA2232 NC_011147.1 2491956 2492411 R similar to |13559874|ref|NP_112084.1| head assembly protein [Bacteriophage HK620]; hypothetical protein complement(2491956..2492411) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143071.1 CDS SSPA2232a NC_011147.1 2492411 2493049 R DNA stabilization protein complement(2492411..2493049) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143072.1 CDS SSPA2232b NC_011147.1 2493053 2494471 R DNA stabilization protein complement(2493053..2494471) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143073.1 CDS SSPA2232c NC_011147.1 2494431 2494931 R DNA stabilization protein complement(2494431..2494931) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143074.1 CDS SSPA2232d NC_011147.1 2494915 2495475 R hypothetical protein complement(2494915..2495475) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143075.1 CDS SSPA2232e NC_011147.1 2495516 2496808 R coat protein complement(2495516..2496808) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143076.1 CDS SSPA2232f NC_011147.1 2496808 2497719 R scaffolding protein complement(2496808..2497719) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143077.1 CDS SSPA2233 NC_011147.1 2497733 2499736 R similar to |9635536|ref|NP_059628.1| portal protein [Enterobacteria phage P22]; portal protein complement(2497733..2499736) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143078.1 CDS SSPA2233a NC_011147.1 2499910 2501409 R terminase large subunit complement(2499910..2501409) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143079.1 CDS SSPA2233b NC_011147.1 2501387 2501875 R terminase small subunit complement(2501387..2501875) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143080.1 CDS SSPA2233c NC_011147.1 2501879 2502283 R hypothetical protein complement(2501879..2502283) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143081.1 CDS SSPA2234 NC_011147.1 2502852 2503373 R similar to |9635595|ref|NP_061507.1| Orf11 [Pseudomonas phage D3]; hypothetical protein complement(2502852..2503373) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143082.1 CDS SSPA2235 NC_011147.1 2503586 2504053 R hypothetical protein complement(2503586..2504053) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143083.1 CDS SSPA2236 NC_011147.1 2504053 2504490 R similar to |9635531|ref|NP_059622.1| lysozyme [Enterobacteria phage P22]; lysozyme complement(2504053..2504490) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143084.1 CDS SSPA2237 NC_011147.1 2504474 2504800 R similar to |21914476|gb|AAM81441.1| gene 13' protein [Bacteriophage P22-pbi]; holin complement(2504474..2504800) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143085.1 CDS SSPA2238 NC_011147.1 2505235 2505858 R similar to |9910850|sp|O80286|REGQ_BPPS3 Antitermination protein (Protein gp23); antitermination complement(2505235..2505858) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143086.1 CDS SSPA2239 NC_011147.1 2505855 2506043 R similar to |9634211|ref|NP_037750.1| Gp68 [Bacteriophage HK97]; hypothetical protein complement(2505855..2506043) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143087.1 CDS SSPA2240 NC_011147.1 2506040 2506402 R similar to |13559855|ref|NP_112065.1| holiday-junction resolvase [Bacteriophage HK620]; hypothetical protein complement(2506040..2506402) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143088.1 CDS SSPA2241 NC_011147.1 2506399 2506689 R ORF136; similar to |9634209|ref|NP_037748.1| Gp66 [Bacteriophage HK97]; hypothetical protein complement(2506399..2506689) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143089.1 CDS SSPA2242 NC_011147.1 2506887 2507063 R similar to |9910778|sp|O48425|NINF_BPH19 Protein ninF; hypothetical protein complement(2506887..2507063) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143090.1 CDS SSPA2243 NC_011147.1 2507056 2507397 R similar to |9635524|ref|NP_059615.1| ninX protein [Enterobacteria phage P22]; hypothetical protein complement(2507056..2507397) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143091.1 CDS SSPA2244 NC_011147.1 2507400 2507576 R similar to |9635523|ref|NP_059614.1| ninE [Enterobacteria phage P22]; hypothetical protein complement(2507400..2507576) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143092.1 CDS SSPA2245 NC_011147.1 2507543 2507716 R similar to |45645192|sp|Q38663|NIND_BPP22 Protein ninD; hypothetical protein complement(2507543..2507716) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143093.1 CDS SSPA2246 NC_011147.1 2507713 2508159 R similar to |32170966|ref|NP_859211.1| hypothetical protein Stx1p132 [Stx1 converting bacteriophage]; hypothetical protein complement(2507713..2508159) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143094.1 CDS SSPA2247 NC_011147.1 2508116 2508412 R ORF98; hypothetical protein complement(2508116..2508412) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143095.1 CDS SSPA2248 NC_011147.1 2509113 2509196 R similar to |41057322|ref|NP_958220.1| gene 45 protein [Enterobacteria phage Sf6]; hypothetical protein complement(2509113..2509196) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143096.1 CDS SSPA2249 NC_011147.1 2509196 2510632 R similar to |13559848|ref|NP_112058.1| replication protein P [Bacteriophage HK620]; DNA replication complement(2509196..2510632) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143097.1 CDS SSPA2250 NC_011147.1 2510622 2511521 R similar to |41057320|ref|NP_958218.1| gene 43 protein [Enterobacteria phage Sf6]; DNA replication complement(2510622..2511521) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143098.1 CDS SSPA2251 NC_011147.1 2511514 2511660 R similar to |9635518|ref|NP_059609.1| unknown protein [Enterobacteria phage P22]; hypothetical protein complement(2511514..2511660) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143099.1 CDS SSPA2252 NC_011147.1 2511695 2511976 R similar to |1130605|emb|CAA64001.1| c1 [Bacteriophage L]; transcriptional activator-regulatory protein complement(2511695..2511976) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143100.1 CDS SSPA2253 NC_011147.1 2512413 2513102 D similar to |1350835|sp|P18680|RPC1_BPHK0 26 kDa repressor protein (Regulatory protein CI); transcriptional activator-regulatory protein 2512413..2513102 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143101.1 CDS SSPA2254 NC_011147.1 2514317 2514619 D similar to |9635514|ref|NP_059605.1| antitermination protein [Enterobacteria phage P22]; hypothetical protein 2514317..2514619 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143102.1 CDS SSPA2255 NC_011147.1 2514632 2515219 R similar to |9635513|ref|NP_059604.1| superinfection exclusion protein [Enterobacteria phage P22]; superinfection exclusion complement(2514632..2515219) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143103.1 CDS SSPA2256 NC_011147.1 2515433 2515627 D antirestriction protein 2515433..2515627 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143104.1 CDS SSPA2257 NC_011147.1 2515664 2515957 D similar to |9635511|ref|NP_059602.1| ORF78 [Enterobacteria phage P22]; hypothetical protein 2515664..2515957 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143105.1 CDS SSPA2258 NC_011147.1 2516272 2516424 D similar to |13559838|ref|NP_112048.1| regulatory protein cIII [Bacteriophage HK620]; hypothetical protein 2516272..2516424 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143106.1 CDS SSPA2259 NC_011147.1 2516405 2516593 D similar to |9635507|ref|NP_059598.1| kil protein [Enterobacteria phage P22]; hypothetical protein 2516405..2516593 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143107.1 CDS SSPA2260 NC_011147.1 2516583 2516726 D similar to |227865|prf||1712369A accessory recombination function gene; hypothetical protein 2516583..2516726 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143108.1 CDS SSPA2261 NC_011147.1 2516852 2517430 D similar to |41057306|ref|NP_958204.1| gene 28 protein [Enterobacteria phage Sf6]; hypothetical protein 2516852..2517430 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143109.1 CDS SSPA2262 NC_011147.1 2517430 2517714 D similar to |9635504|ref|NP_059595.1| anti-RecBCD [Enterobacteria phage P22]; hypothetical protein 2517430..2517714 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143110.1 CDS SSPA2263 NC_011147.1 2517761 2518054 D similar to |9635503|ref|NP_059594.1| anti-RecBCD [Enterobacteria phage P22]; hypothetical protein 2517761..2518054 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143111.1 CDS SSPA2264 NC_011147.1 2518065 2518235 D ORF56; similar to |13559832|ref|NP_112042.1| unknown [Bacteriophage HK620]; hypothetical protein 2518065..2518235 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143112.1 CDS SSPA2265 NC_011147.1 2518888 2519388 D ORF109; similar to |13559830|ref|NP_112040.1| unknown [Bacteriophage HK620]; hypothetical protein 2518888..2519388 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143113.1 CDS SSPA2266 NC_011147.1 2520154 2521239 D similar to |9635497|ref|NP_059588.1| eaa [Enterobacteria phage P22]; hypothetical protein 2520154..2521239 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143114.2 CDS SSPA2267 NC_011147.1 2521232 2521516 D similar to |9633400|ref|NP_050503.1| hypothetical protein VT2-Sap04 [Bacteriophage VT2-Sa]; hypothetical protein 2521232..2521516 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143115.1 CDS SSPA2268 NC_011147.1 2521728 2522078 D similar to |19548990|ref|NP_599059.1| excisionase [Shigella flexneri bacteriophage V]; excisionase 2521728..2522078 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143116.1 CDS SSPA2269 NC_011147.1 2521955 2523118 D similar to |9635493|ref|NP_059584.1| integrase [Enterobacteria phage P22]; integrase 2521955..2523118 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143117.1 CDS proA NC_011147.1 2523324 2524574 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(2523324..2524574) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143118.1 CDS SSPA2271 NC_011147.1 2524586 2525689 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(2524586..2525689) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143119.1 CDS SSPA2272 NC_011147.1 2525972 2527024 D similar to Salmonella typhi CT18 outer membrane pore protein E precursor; outer membrane phosphoporin protein E 2525972..2527024 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143120.1 CDS SSPA2274 NC_011147.1 2527075 2527476 R involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl complement(2527075..2527476) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143121.1 CDS frsA NC_011147.1 2527534 2528778 R forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein complement(2527534..2528778) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143122.1 CDS SSPA2276 NC_011147.1 2528867 2529325 R 'catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively'; xanthine-guanine phosphoribosyltransferase complement(2528867..2529325) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143123.1 CDS SSPA2277 NC_011147.1 2529574 2531031 D similar to Salmonella typhi CT18 aminoacyl-histidine dipeptidase precursor; aminoacyl-histidine dipeptidase 2529574..2531031 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143124.1 CDS prfH NC_011147.1 2531186 2531800 R similar to release factor 1 and 2; peptide chain release factor-like protein complement(2531186..2531800) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143125.1 CDS SSPA2279 NC_011147.1 2531797 2532936 R mutations in this gene result in a compromised ability for drug-inducible mexXY expression; expression is inducible by the same ribosome-targeting agents that induce mexXY; hypothetical protein complement(2531797..2532936) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143126.1 CDS SSPA2280 NC_011147.1 2533155 2534210 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(2533155..2534210) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143127.1 CDS SSPA2281 NC_011147.1 2534460 2535200 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 2534460..2535200 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143128.1 CDS SSPA2282 NC_011147.1 2535171 2535938 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2535171..2535938) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143129.1 CDS gmhA NC_011147.1 2536102 2536680 R catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase complement(2536102..2536680) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143130.1 CDS fadE NC_011147.1 2536920 2539364 D functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2536920..2539364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143131.1 CDS SSPA2285 NC_011147.1 2539473 2540240 D similar to Salmonella typhi CT18 possible hydrolase; hypothetical protein 2539473..2540240 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143132.1 CDS SSPA2286 NC_011147.1 2540611 2541018 D similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein 2540611..2541018 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143133.1 CDS SSPA2287 NC_011147.1 2541349 2542068 D similar to Salmonella typhi CT18 possible outer membrane adhesin; outer membrane adhesin 2541349..2542068 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143134.1 CDS SSPA2288 NC_011147.1 2542072 2542200 R hypothetical protein complement(2542072..2542200) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143135.1 CDS SSPA2289 NC_011147.1 2542373 2542567 D hypothetical protein 2542373..2542567 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143136.1 CDS SSPA2290 NC_011147.1 2543788 2544243 R similar to Salmonella typhi Ty2 transcriptional regulator; transcriptional regulator complement(2543788..2544243) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143137.1 CDS SSPA2291 NC_011147.1 2544376 2545455 R similar to Salmonella typhi Ty2 fimbrail protein; fimbrial protein complement(2544376..2545455) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143138.1 CDS SSPA2292 NC_011147.1 2545478 2548165 R outermembrane fimbrial usher protein complement(2545478..2548165) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143139.1 CDS SSPA2293 NC_011147.1 2548274 2548849 R similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit complement(2548274..2548849) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143140.1 CDS SSPA2294 NC_011147.1 2548900 2549610 R similar to Salmonella typhi Ty2 fimbrial protein; fimbrial protein complement(2548900..2549610) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143142.1 CDS SSPA2296 NC_011147.1 2551261 2551428 R similar to |1915951|emb|CAB06027.1| transposase ORFA [Salmonella enteritidis]; hypothetical protein complement(2551261..2551428) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143143.1 CDS SSPA2297 NC_011147.1 2551503 2551628 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2551503..2551628) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143144.1 CDS SSPA2298 NC_011147.1 2551748 2552692 R similar to Salmonella typhi CT18 LysR-family transcriptional regulator SinR; LysR family transcriptional regulator complement(2551748..2552692) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143145.1 CDS SSPA2299 NC_011147.1 2553512 2554333 R ybeJ-like protein complement(2553512..2554333) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143146.1 CDS SSPA2300 NC_011147.1 2555233 2557743 R similar to Salmonella typhi CT18 outer-membrane fimbrial usher protein; outer-membrane fimbrial usher protein complement(2555233..2557743) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143147.1 CDS SSPA2301 NC_011147.1 2557767 2558507 R similar to Salmonella typhi CT18 periplasmic fimbrial chaperone protein; periplasmic fimbrial chaperone protein complement(2557767..2558507) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143148.1 CDS SSPA2302 NC_011147.1 2559208 2559702 R similar to Salmonella typhi Ty2 probable lipoprotein; lipoprotein complement(2559208..2559702) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143149.1 CDS SSPA2305 NC_011147.1 2561239 2561553 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2561239..2561553 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143150.1 CDS SSPA2306 NC_011147.1 2564322 2564633 R similar to |37528110|ref|NP_931455.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; hypothetical protein complement(2564322..2564633) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143151.1 CDS SSPA2306a NC_011147.1 2564653 2569365 R Rhs-family protein complement(2564653..2569365) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143152.1 CDS SSPA2307 NC_011147.1 2569899 2572145 R similar to |22988322|ref|ZP_00033389.1| COG3501: Uncharacterized protein conserved in bacteria [Burkholderia fungorum]; hypothetical protein complement(2569899..2572145) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143153.1 CDS SSPA2308 NC_011147.1 2572177 2572638 R similar to |16124062|ref|NP_407375.1| hypothetical protein [Yersinia pestis]; hypothetical protein complement(2572177..2572638) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143154.1 CDS SSPA2309 NC_011147.1 2572640 2573383 R similar to |16123243|ref|NP_406556.1| hypothetical protein [Yersinia pestis]; hypothetical protein complement(2572640..2573383) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143155.1 CDS SSPA2310 NC_011147.1 2573468 2573929 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(2573468..2573929) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143156.1 CDS SSPA2311 NC_011147.1 2573914 2574384 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2573914..2574384) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143157.1 CDS SSPA2312 NC_011147.1 2574488 2574961 R similar to Salmonella typhi CT18 probable secreted protein; hypothetical protein complement(2574488..2574961) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143158.1 CDS SSPA2313 NC_011147.1 2575458 2576225 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2575458..2576225) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143159.1 CDS SSPA2314 NC_011147.1 2576225 2580085 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(2576225..2580085) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143160.1 CDS SSPA2315 NC_011147.1 2580119 2580550 R similar to Salmonella typhimurium shiga-like toxin A subunit; shiga-like toxin A subunit complement(2580119..2580550) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143161.1 CDS SSPA2316 NC_011147.1 2580752 2581525 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2580752..2581525) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143162.1 CDS SSPA2317 NC_011147.1 2581530 2582834 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2581530..2582834) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143163.1 CDS SSPA2318 NC_011147.1 2582831 2584174 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2582831..2584174) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143164.1 CDS SSPA2319 NC_011147.1 2584178 2584714 R similar to Salmonella typhi CT18 probable lipoprotein; lipoprotein complement(2584178..2584714) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143165.1 CDS SSPA2320 NC_011147.1 2584782 2585267 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2584782..2585267) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143166.1 CDS SSPA2321 NC_011147.1 2585410 2585793 R similar to Salmonella typhimurium periplasmic protein; hypothetical protein complement(2585410..2585793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143167.1 CDS SSPA2322 NC_011147.1 2585778 2586263 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(2585778..2586263) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143168.1 CDS SSPA2323 NC_011147.1 2586374 2586490 R hypothetical protein complement(2586374..2586490) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143169.1 CDS SSPA2324 NC_011147.1 2586557 2587042 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2586557..2587042) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143170.1 CDS SSPA2325 NC_011147.1 2587294 2587626 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(2587294..2587626) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143171.1 CDS SSPA2326 NC_011147.1 2588206 2589714 R similar to |22983766|ref|ZP_00028937.1| COG3517: Uncharacterized protein conserved in bacteria [Burkholderia fungorum]; hypothetical protein complement(2588206..2589714) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143172.1 CDS SSPA2327 NC_011147.1 2589738 2590280 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2589738..2590280) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143173.1 CDS SSPA2328 NC_011147.1 2590342 2590632 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2590342..2590632) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143174.1 CDS SSPA2329 NC_011147.1 2590635 2590733 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2590635..2590733) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143175.1 CDS SSPA2330 NC_011147.1 2590718 2593381 R similar to Salmonella typhi CT18 ClpB-like protein; ClpB-like protein complement(2590718..2593381) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143176.1 CDS SSPA2331 NC_011147.1 2594638 2595462 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2594638..2595462 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143177.1 CDS SSPA2332 NC_011147.1 2595459 2595953 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2595459..2595953 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143178.1 CDS SSPA2333 NC_011147.1 2595969 2597852 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2595969..2597852 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143179.1 CDS SSPA2334 NC_011147.1 2597849 2598844 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2597849..2598844 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143180.1 CDS SSPA2335 NC_011147.1 2598855 2599898 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 2598855..2599898 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143181.1 CDS SSPA2336 NC_011147.1 2600429 2601160 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(2600429..2601160) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143182.1 CDS rnhA NC_011147.1 2601224 2601691 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2601224..2601691 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143183.1 CDS SSPA2338 NC_011147.1 2601688 2602410 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2601688..2602410) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143184.1 CDS SSPA2339 NC_011147.1 2602445 2603200 D catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione; hydroxyacylglutathione hydrolase 2602445..2603200 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143185.1 CDS mltD NC_011147.1 2603272 2604639 D 'catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall'; membrane-bound lytic murein transglycosylase D 2603272..2604639 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143186.1 CDS SSPA2341 NC_011147.1 2604695 2605465 R similar to Salmonella typhi CT18 methyltransferase; methyltransferase complement(2604695..2605465) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143187.1 CDS SSPA2342 NC_011147.1 2605543 2606322 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2605543..2606322) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143188.1 CDS SSPA2343 NC_011147.1 2606475 2607650 R similar to Salmonella typhi CT18 drug efflux protein; drug efflux protein complement(2606475..2607650) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143189.1 CDS SSPA2344 NC_011147.1 2607755 2608669 D similar to Salmonella typhi CT18 hypothetical transcriptional regulator; hypothetical protein 2607755..2608669 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143190.1 CDS dkgB NC_011147.1 2608691 2609494 R 'catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid'; 2,5-diketo-D-gluconate reductase B complement(2608691..2609494) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143191.1 CDS SSPA2346 NC_011147.1 2615497 2618070 R similar to Salmonella typhi CT18 ClpB protein (heat shock protein f84.1); protein disaggregation chaperone complement(2615497..2618070) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143192.1 CDS SSPA2347 NC_011147.1 2618200 2618931 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2618200..2618931) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143193.1 CDS rluD NC_011147.1 2618928 2619908 R 'responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA'; 23S rRNA pseudouridine synthase D complement(2618928..2619908) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143194.1 CDS SSPA2349 NC_011147.1 2620040 2620777 D 'with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline'; outer membrane protein assembly complex subunit YfiO 2620040..2620777 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143195.1 CDS SSPA2350 NC_011147.1 2621049 2621387 D associated with 30S ribosomal subunit; interferes with translation elongation; translation inhibitor protein RaiA 2621049..2621387 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143196.1 CDS pheA NC_011147.1 2621638 2622798 D catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 2621638..2622798 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143197.1 CDS SSPA2352 NC_011147.1 2622759 2623667 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2622759..2623667) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143198.1 CDS tyrA NC_011147.1 2623725 2624792 R catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase complement(2623725..2624792) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143199.1 CDS SSPA2354 NC_011147.1 2624856 2625926 R 'catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive'; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2624856..2625926) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143200.1 CDS SSPA2355 NC_011147.1 2626366 2626884 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 2626366..2626884 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143201.1 CDS SSPA2356 NC_011147.1 2626877 2628097 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2626877..2628097 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143202.1 CDS rplS NC_011147.1 2628254 2628601 R this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 complement(2628254..2628601) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143203.1 CDS trmD NC_011147.1 2628642 2629409 R methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase complement(2628642..2629409) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143204.1 CDS rimM NC_011147.1 2629454 2630002 R Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM complement(2629454..2630002) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143205.1 CDS rpsP NC_011147.1 2630021 2630269 R binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 complement(2630021..2630269) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143206.1 CDS SSPA2361 NC_011147.1 2630521 2631882 R with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein complement(2630521..2631882) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143207.1 CDS SSPA2362 NC_011147.1 2632048 2632839 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2632048..2632839 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143208.1 CDS SSPA2363 NC_011147.1 2632946 2634145 D similar to Salmonella typhi Ty2 membrane protein; hypothetical protein 2632946..2634145 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143209.1 CDS SSPA2364 NC_011147.1 2634275 2634880 D hypothetical protein 2634275..2634880 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143210.1 CDS SSPA2365 NC_011147.1 2634921 2635511 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(2634921..2635511) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143211.1 CDS SSPA2366 NC_011147.1 2635508 2635702 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(2635508..2635702) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143212.1 CDS ppnK NC_011147.1 2635634 2636512 D catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 2635634..2636512 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143213.1 CDS SSPA2368 NC_011147.1 2636598 2638259 D similar to Salmonella typhi CT18 DNA repair protein; recombination and repair protein 2636598..2638259 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143214.2 CDS SSPA2369 NC_011147.1 2638408 2638746 D similar to Salmonella typhi CT18 small protein A; hypothetical protein 2638408..2638746 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143215.1 CDS SSPA2370 NC_011147.1 2638912 2639187 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2638912..2639187) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143216.1 CDS SSPA2371 NC_011147.1 2639192 2639629 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2639192..2639629) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143217.1 CDS smpB NC_011147.1 2639817 2640299 D binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; ssrA-binding protein 2639817..2640299 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143218.1 CDS SSPA2373 NC_011147.1 2640918 2652392 D similar to Salmonella typhi CT18 large repetitive protein; hypothetical protein 2640918..2652392 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143219.1 CDS SSPA2374 NC_011147.1 2652457 2653866 D similar to Salmonella typhi CT18 type I secretion protein; type I secretion protein 2652457..2653866 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143220.1 CDS SSPA2375 NC_011147.1 2653863 2656043 D 'similar to Salmonella typhi CT18 type I secretion protein, ATP-binding protein; SNP @ nt785; Sanger - a, McClelland - g (ancestral); nonsynonymous (D/G @ aa262)'; type I secretion protein ATP-binding protein 2653863..2656043 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143221.1 CDS SSPA2376 NC_011147.1 2656051 2657214 D similar to Salmonella typhi CT18 type I secretion protein; type I secretion protein 2656051..2657214 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143222.1 CDS SSPA2377 NC_011147.1 2657744 2658121 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2657744..2658121 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143223.1 CDS SSPA2378 NC_011147.1 2658208 2658426 R similar to Salmonella typhi CT18 positive regulator of late gene transcription; positive regulator of late gene transcription complement(2658208..2658426) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143224.1 CDS SSPA2379 NC_011147.1 2658494 2659594 R similar to Salmonella typhi CT18 regulator of late gene expression; regulator of late gene expression complement(2658494..2659594) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143225.1 CDS SSPA2380 NC_011147.1 2659591 2660076 R similar to Salmonella typhi CT18 phage tail protein; phage tail protein complement(2659591..2660076) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143226.1 CDS SSPA2381 NC_011147.1 2660076 2662856 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2660076..2662856) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143227.1 CDS SSPA2382 NC_011147.1 2662849 2662968 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2662849..2662968) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143228.1 CDS SSPA2383 NC_011147.1 2662983 2663285 R similar to Salmonella typhi CT18 phage tail protein; phage tail protein complement(2662983..2663285) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143229.1 CDS SSPA2384 NC_011147.1 2663340 2663855 R similar to Salmonella typhi CT18 probable major tail tube protein; major tail tube protein complement(2663340..2663855) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143230.1 CDS SSPA2385 NC_011147.1 2663865 2665037 R similar to Salmonella typhi CT18 probable major tail sheath protein; major tail sheath protein complement(2663865..2665037) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143231.1 CDS SSPA2386 NC_011147.1 2665140 2665358 R similar to Escherichia coli K12 inversion of adjacent DNA; at locus of e14 element; inversion of adjacent DNA; at locus of e14 element complement(2665140..2665358) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143232.1 CDS SSPA2387 NC_011147.1 2665572 2666294 D similar to Salmonella typhi Ty2 invasion-associated secreted protein.; invasion-associated secreted protein 2665572..2666294 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143233.1 CDS SSPA2388 NC_011147.1 2666492 2666899 R similar to Salmonella typhi CT18 phage tail fibre protein; phage tail fiber protein complement(2666492..2666899) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143234.1 CDS SSPA2389 NC_011147.1 2666906 2668525 R similar to Salmonella typhi Ty2 probable phage tail fiber protein; phage tail fiber protein complement(2666906..2668525) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143235.1 CDS SSPA2390 NC_011147.1 2668522 2669127 R similar to Salmonella typhi CT18 phage tail protein; phage tail protein complement(2668522..2669127) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143236.1 CDS SSPA2391 NC_011147.1 2669120 2670028 R similar to Salmonella typhi CT18 probable phage baseplate assembly protein; phage baseplate assembly protein complement(2669120..2670028) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143237.1 CDS SSPA2392 NC_011147.1 2670015 2670374 R similar to Salmonella typhi CT18 phage baseplate assembly protein; phage baseplate assembly protein complement(2670015..2670374) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143238.1 CDS SSPA2393 NC_011147.1 2670371 2670949 R similar to Salmonella typhi CT18 phage baseplate assembly protein; phage baseplate assembly protein complement(2670371..2670949) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143239.1 CDS SSPA2394 NC_011147.1 2671018 2671464 R similar to Salmonella typhi CT18 phage tail completion protein; phage tail completion protein complement(2671018..2671464) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143240.1 CDS SSPA2395 NC_011147.1 2671457 2671888 R similar to Salmonella typhi CT18 phage tail protein; phage tail protein complement(2671457..2671888) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143241.1 CDS SSPA2396 NC_011147.1 2671984 2672409 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(2671984..2672409) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143242.1 CDS SSPA2397 NC_011147.1 2672409 2672786 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2672409..2672786) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143243.1 CDS SSPA2398 NC_011147.1 2672791 2673261 R similar to Salmonella typhi Ty2 lysozyme; lysozyme complement(2672791..2673261) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143244.1 CDS SSPA2399 NC_011147.1 2673281 2673496 R similar to Salmonella typhi Ty2 possible secretion protein; secretion protein complement(2673281..2673496) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143245.1 CDS SSPA2400 NC_011147.1 2673500 2673703 R similar to Salmonella typhi CT18 phage tail protein; phage tail protein complement(2673500..2673703) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143246.1 CDS SSPA2401 NC_011147.1 2673703 2674167 R similar to Salmonella typhi CT18 capsid completion protein; capsid completion protein complement(2673703..2674167) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143247.1 CDS SSPA2402 NC_011147.1 2674261 2674911 R similar to Salmonella typhi CT18 phage terminase; phage terminase complement(2674261..2674911) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143248.1 CDS SSPA2403 NC_011147.1 2674915 2675979 R similar to Salmonella typhi CT18 major capsid protein; major capsid protein complement(2674915..2675979) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143249.1 CDS SSPA2404 NC_011147.1 2675996 2676829 R similar to Salmonella typhi CT18 capsid protein; capsid protein complement(2675996..2676829) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143250.1 CDS SSPA2405 NC_011147.1 2676972 2678738 D similar to Salmonella typhi CT18 probable terminase subunit; terminase subunit 2676972..2678738 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143251.1 CDS SSPA2406 NC_011147.1 2678738 2679781 D similar to Salmonella typhi CT18 probable capsid portal protein; capsid portal protein 2678738..2679781 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143252.1 CDS SSPA2407 NC_011147.1 2679830 2680525 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2679830..2680525) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143253.1 CDS SSPA2408 NC_011147.1 2680545 2681609 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2680545..2681609) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143254.1 CDS SSPA2409 NC_011147.1 2681606 2682670 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2681606..2682670) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143255.1 CDS SSPA2410 NC_011147.1 2682680 2682898 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2682680..2682898) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143256.1 CDS SSPA2411 NC_011147.1 2682994 2683227 R similar to |34335033|gb|AAQ65008.1| unknown [synthetic construct]; hypothetical protein complement(2682994..2683227) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143257.1 CDS SSPA2412 NC_011147.1 2683239 2683427 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2683239..2683427) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143258.1 CDS SSPA2413 NC_011147.1 2683595 2685997 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2683595..2685997) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143259.1 CDS SSPA2414 NC_011147.1 2685988 2686848 R similar to Salmonella typhi CT18 DNA adenine methylase; DNA adenine methylase complement(2685988..2686848) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143260.1 CDS SSPA2415 NC_011147.1 2686845 2687429 R similar to Salmonella typhi CT18 exonuclease; exonuclease complement(2686845..2687429) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143261.1 CDS SSPA2416 NC_011147.1 2687426 2687653 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2687426..2687653) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143262.1 CDS SSPA2417 NC_011147.1 2687653 2687886 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2687653..2687886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143263.1 CDS SSPA2418 NC_011147.1 2687954 2688295 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2687954..2688295) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143264.1 CDS SSPA2419 NC_011147.1 2688259 2688459 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2688259..2688459) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143265.1 CDS SSPA2420 NC_011147.1 2688467 2688976 R similar to Salmonella typhi CT18 phage regulatory protein; phage regulatory protein complement(2688467..2688976) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143266.1 CDS SSPA2421 NC_011147.1 2689009 2689251 R similar to Salmonella typhi CT18 phage regulatory protein; phage regulatory protein complement(2689009..2689251) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143267.1 CDS SSPA2422 NC_011147.1 2689368 2690000 D similar to Salmonella typhi CT18 phage repressor protein cI; phage repressor protein cI 2689368..2690000 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143268.1 CDS SSPA2423 NC_011147.1 2690004 2691029 D similar to Salmonella typhi CT18 phage integrase; phage integrase 2690004..2691029 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143269.1 CDS SSPA2424 NC_011147.1 2691562 2692320 D similar to Salmonella typhi CT18 probable bacteriophage integrase; bacteriophage integrase 2691562..2692320 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143270.1 CDS SSPA2424a NC_011147.1 2693146 2694264 R No database matches; hypothetical protein complement(2693146..2694264) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143271.1 CDS SSPA2425 NC_011147.1 2694944 2696644 R similar to |37527900|ref|NP_931245.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein complement(2694944..2696644) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143272.1 CDS SSPA2426 NC_011147.1 2696647 2697138 R similar to |37527368|ref|NP_930712.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein complement(2696647..2697138) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143273.1 CDS SSPA2427 NC_011147.1 2697164 2697889 R similar to |37527369|ref|NP_930713.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein complement(2697164..2697889) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143274.1 CDS SSPA2428 NC_011147.1 2697879 2698406 R similar to |9634075|ref|NP_052268.1| unnamed protein product [Enterobacteria phage 186]; phage protein complement(2697879..2698406) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144951.1 CDS SSPA2428a NC_011147.1 2698424 2700451 R phage tail protein complement(2698424..2700451) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143275.1 CDS SSPA2429 NC_011147.1 2700461 2701036 R similar to |37527904|ref|NP_931249.1| hypothetical protein [Photorhabdus luminescens subsp. laumondii TTO1]; phage protein complement(2700461..2701036) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143276.1 CDS SSPA2430 NC_011147.1 2701041 2702174 R similar to |46133738|ref|ZP_00157650.2| COG3299: Uncharacterized homolog of phage Mu protein gp47 [Haemophilus influenzae R2866]; phage protein complement(2701041..2702174) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143277.1 CDS SSPA2431 NC_011147.1 2702222 2702551 R similar to |9628634|ref|NP_043499.1| orf28 [Haemophilus phage HP1]; phage protein complement(2702222..2702551) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143278.1 CDS SSPA2432 NC_011147.1 2702548 2704518 R similar to |9628633|ref|NP_043498.1| orf27 [Haemophilus phage HP1]; phage protein complement(2702548..2704518) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143279.1 CDS SSPA2433 NC_011147.1 2704706 2704963 R similar to |31195103|ref|XP_306499.1| ENSANGP00000001476 [Anopheles gambiae]; phage protein complement(2704706..2704963) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143280.1 CDS SSPA2434 NC_011147.1 2706083 2706538 R similar to |9628628|ref|NP_043493.1| orf24 [Haemophilus phage HP1]; phage protein complement(2706083..2706538) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143281.1 CDS SSPA2435 NC_011147.1 2706535 2707662 R similar to |17981837|ref|NP_536828.1| tail sheath [Haemophilus phage HP2]; phage protein complement(2706535..2707662) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143282.1 CDS SSPA2436 NC_011147.1 2707659 2708366 R similar to |17981836|ref|NP_536827.1| orf22 [Haemophilus phage HP2]; phage protein complement(2707659..2708366) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143283.1 CDS SSPA2437 NC_011147.1 2708363 2708869 R similar to |17975131|ref|NP_536653.1| hypothetical protein K139p26 [Bacteriophage K139]; phage protein complement(2708363..2708869) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143284.1 CDS SSPA2438 NC_011147.1 2708866 2709318 R similar to |17975130|ref|NP_536652.1| head completion protein [Bacteriophage K139]; phage protein complement(2708866..2709318) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143285.1 CDS SSPA2439 NC_011147.1 2709415 2710074 R similar to |31194915|ref|XP_306405.1| ENSANGP00000022466 [Anopheles gambiae]; phage protein complement(2709415..2710074) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143286.1 CDS SSPA2440 NC_011147.1 2710120 2711091 R similar to |17975128|ref|NP_536650.1| major capsid protein [Bacteriophage K139]; phage protein complement(2710120..2711091) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143287.1 CDS SSPA2441 NC_011147.1 2712165 2713940 D 'similar to |17975126|ref|NP_536648.1| terminase, ATPase subunit [Bacteriophage K139]'; phage protein 2712165..2713940 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143288.1 CDS SSPA2442 NC_011147.1 2713937 2714998 D similar to |9628619|ref|NP_043484.1| orf15 [Haemophilus phage HP1]; phage protein 2713937..2714998 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143289.1 CDS SSPA2443 NC_011147.1 2715049 2715318 D similar to |17975123|ref|NP_536645.1| zinc-finger protein [Bacteriophage K139]; phage protein 2715049..2715318 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143290.1 CDS SSPA2444 NC_011147.1 2715623 2717155 R similar to |41057388|ref|NP_958093.1| gp36 [Bacteriophage PSP3]; phage protein complement(2715623..2717155) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143291.1 CDS SSPA2445 NC_011147.1 2717685 2718497 R similar to |118679|sp|P21311|DMA7_ECOLI Retron EC67 DNA adenine methylase (ORF1-EC67 DAM) (M.Eco67Dam); phage protein complement(2717685..2718497) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143292.1 CDS SSPA2446 NC_011147.1 2719839 2720369 R similar to |141343|sp|P21316|YR7B_ECOLI HYPOTHETICAL 18.1 KD PROTEIN (ORFB) (RETRON EC67); phage protein complement(2719839..2720369) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143293.1 CDS SSPA2447 NC_011147.1 2721297 2722310 D bacteriophage integrase 2721297..2722310 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143294.1 CDS SSPA2448 NC_011147.1 2723982 2724521 R similar to Salmonella typhimurium Flagellar synthesis: repressor of fliC; Flagellar synthesis: repressor of fliC complement(2723982..2724521) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143295.1 CDS SSPA2449 NC_011147.1 2724589 2726109 R 'structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes'; flagellin complement(2724589..2726109) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143296.1 CDS SSPA2451 NC_011147.1 2727735 2728850 D similar to Salmonella typhi CT18 glycosyltransferase; glycosyltransferase 2727735..2728850 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143297.1 CDS SSPA2452 NC_011147.1 2728931 2732587 D similar to Salmonella typhi CT18 ABC transporter protein; ABC transporter 2728931..2732587 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143298.1 CDS SSPA2453 NC_011147.1 2732697 2733941 D similar to Salmonella typhi CT18 ferric enterochelin esterase; ferric enterochelin esterase 2732697..2733941 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143299.1 CDS SSPA2454 NC_011147.1 2733973 2734908 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 2733973..2734908 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143300.1 CDS SSPA2455 NC_011147.1 2734950 2737124 R Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA complement(2734950..2737124) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143301.1 CDS SSPA2456 NC_011147.1 2737655 2737987 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(2737655..2737987) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143302.1 CDS SSPA2457 NC_011147.1 2738162 2739214 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2738162..2739214) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143303.1 CDS SSPA2458 NC_011147.1 2739734 2740663 D similar to Salmonella typhi CT18 virulence protein; virulence protein 2739734..2740663 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143304.1 CDS SSPA2459 NC_011147.1 2740957 2741853 D similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator 2740957..2741853 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143305.1 CDS SSPA2460 NC_011147.1 2742576 2743589 R similar to Salmonella typhimurium nickel transporter; nickel transporter complement(2742576..2743589) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143306.1 CDS SSPA2461 NC_011147.1 2743722 2745137 R similar to Salmonella typhi CT18 two-component system sensor kinase; two-component system sensor kinase complement(2743722..2745137) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143307.1 CDS SSPA2462 NC_011147.1 2745124 2745798 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(2745124..2745798) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143308.1 CDS SSPA2463 NC_011147.1 2745837 2745956 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2745837..2745956 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143309.2 CDS SSPA2464 NC_011147.1 2745953 2746930 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 2745953..2746930 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143310.1 CDS SSPA2465 NC_011147.1 2746945 2747376 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2746945..2747376 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143311.1 CDS SSPA2466 NC_011147.1 2747387 2748901 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2747387..2748901 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143312.1 CDS SSPA2467 NC_011147.1 2749204 2750181 D in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; hypothetical protein 2749204..2750181 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143313.1 CDS SSPA2468 NC_011147.1 2750207 2751475 D catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; hydroxyglutarate oxidase 2750207..2751475 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143314.1 CDS gabD NC_011147.1 2751497 2752945 D catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; succinate-semialdehyde dehydrogenase I 2751497..2752945 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143315.1 CDS SSPA2470 NC_011147.1 2752960 2754243 D catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2752960..2754243 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143316.2 CDS SSPA2471 NC_011147.1 2754373 2755773 D similar to Salmonella typhi CT18 GabA permease (4-amino butyrate transport carrier); gamma-aminobutyrate transporter 2754373..2755773 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143317.1 CDS SSPA2472 NC_011147.1 2755815 2756492 D regulator of gab gene expression; DNA-binding transcriptional regulator CsiR 2755815..2756492 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143318.1 CDS SSPA2473 NC_011147.1 2756514 2756993 R similar to Salmonella typhimurium LysM domain; LysM domain/BON superfamily protein complement(2756514..2756993) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143319.1 CDS SSPA2474 NC_011147.1 2757063 2757221 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2757063..2757221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143320.2 CDS SSPA2475 NC_011147.1 2757404 2757703 D transcriptional regulator 2757404..2757703 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143321.1 CDS SSPA2476 NC_011147.1 2757713 2758240 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2757713..2758240 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143322.1 CDS SSPA2477 NC_011147.1 2758373 2758498 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2758373..2758498 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143323.1 CDS SSPA2478 NC_011147.1 2758588 2758989 R similar to Salmonella typhi CT18 DNA-binding protein StpA; DNA binding protein, nucleoid-associated complement(2758588..2758989) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143324.1 CDS SSPA2479 NC_011147.1 2759687 2760136 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2759687..2760136 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143325.1 CDS SSPA2480 NC_011147.1 2760121 2760522 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2760121..2760522) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143326.1 CDS SSPA2481 NC_011147.1 2761094 2762428 R similar to |46317572|ref|ZP_00218150.1| COG1167: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Burkholderia cepacia R18194]; hypothetical protein complement(2761094..2762428) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143327.1 CDS SSPA2482 NC_011147.1 2762517 2762948 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2762517..2762948 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143328.1 CDS SSPA2483 NC_011147.1 2762945 2763121 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2762945..2763121 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143329.1 CDS SSPA2484 NC_011147.1 2763220 2763465 D similar to Salmonella typhi CT18 glutaredoxin; glutaredoxin-like protein 2763220..2763465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143330.1 CDS nrdI NC_011147.1 2763462 2763872 D in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 2763462..2763872 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143331.1 CDS SSPA2486 NC_011147.1 2763845 2765989 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2763845..2765989 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143332.1 CDS SSPA2487 NC_011147.1 2767314 2768516 D with ProWX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter ATP-binding subunit 2767314..2768516 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143333.1 CDS SSPA2488 NC_011147.1 2768509 2769573 D with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 2768509..2769573 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143334.1 CDS proX NC_011147.1 2769643 2770638 D 'with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine'; glycine betaine transporter periplasmic subunit 2769643..2770638 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143335.1 CDS SSPA2490 NC_011147.1 2770803 2771987 D similar to Salmonella typhi CT18 transmembrane transport protein; transmembrane transport protein 2770803..2771987 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143336.1 CDS SSPA2491 NC_011147.1 2772484 2773014 D DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 2772484..2773014 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143337.1 CDS SSPA2492 NC_011147.1 2773141 2774313 D similar to Salmonella typhi CT18 multidrug resistance protein A; multidrug resistance protein A 2773141..2774313 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143338.1 CDS SSPA2493 NC_011147.1 2774330 2775868 D similar to Salmonella typhi CT18 multidrug resistance protein B; multidrug resistance protein B 2774330..2775868 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143339.1 CDS SSPA2494 NC_011147.1 2777633 2778148 R catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase complement(2777633..2778148) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143340.1 CDS SSPA2495 NC_011147.1 2778298 2779854 R involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase complement(2778298..2779854) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143341.1 CDS SSPA2496 NC_011147.1 2779931 2780356 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(2779931..2780356) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143342.1 CDS SSPA2497 NC_011147.1 2780353 2780919 R 'YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent'; fructose-1-phosphatase complement(2780353..2780919) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143343.1 CDS SSPA2498 NC_011147.1 2781908 2782093 R affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator complement(2781908..2782093) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143344.1 CDS alaS NC_011147.1 2782328 2784958 R 'Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; alanyl-tRNA synthetase complement(2782328..2784958) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143345.1 CDS recX NC_011147.1 2785194 2785694 R binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX complement(2785194..2785694) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143346.1 CDS recA NC_011147.1 2785811 2786872 R 'catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs'; recombinase A complement(2785811..2786872) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143347.1 CDS SSPA2502 NC_011147.1 2786957 2787454 R similar to Salmonella typhi CT18 conserved hypothetical protein; competence damage-inducible protein A complement(2786957..2787454) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143348.1 CDS SSPA2503 NC_011147.1 2787933 2789012 R membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B complement(2787933..2789012) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143349.1 CDS SSPA2504 NC_011147.1 2789266 2789829 D 'similar to Salmonella typhi CT18 PTS system,glucitol/sorbitol-specific IIBC component'; PTS system glucitol/sorbitol-specific transporter subunit IIBC 2789266..2789829 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143350.1 CDS SSPA2505 NC_011147.1 2789826 2790797 D 'similar to Salmonella typhi CT18 PTS system,glucitol/sorbitol-specific IIBC component'; PTS system glucitol/sorbitol-specific transporter subunit IIBC 2789826..2790797 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143351.1 CDS SSPA2506 NC_011147.1 2790809 2791171 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucitol/sorbitol-specific transporter subunit IIA 2790809..2791171 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143352.1 CDS SSPA2507 NC_011147.1 2791183 2791962 D catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; sorbitol-6-phosphate dehydrogenase 2791183..2791962 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143353.1 CDS SSPA2508 NC_011147.1 2792039 2792398 D regulator for glucitol utilization; DNA-binding transcriptional activator GutM 2792039..2792398 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143354.1 CDS srlR NC_011147.1 2792596 2793369 D regulates genes involved in glucitol utilization; DNA-binding transcriptional repressor SrlR 2792596..2793369 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143355.1 CDS gutQ NC_011147.1 2793362 2794327 D catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate; D-arabinose 5-phosphate isomerase 2793362..2794327 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143356.1 CDS SSPA2511 NC_011147.1 2794324 2795832 R Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator complement(2794324..2795832) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143357.1 CDS SSPA2512 NC_011147.1 2796029 2797468 D detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 2796029..2797468 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143358.1 CDS SSPA2513 NC_011147.1 2797465 2798598 D catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 2797465..2798598 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143359.1 CDS SSPA2514 NC_011147.1 2798695 2800935 R similar to Salmonella typhi Ty2 hydrogenase maturation protein; hydrogenase maturation protein complement(2798695..2800935) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143360.1 CDS SSPA2515 NC_011147.1 2801081 2801626 R involved in electron transport from formate to hydrogen; electron transport protein HydN complement(2801081..2801626) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143361.1 CDS SSPA2516 NC_011147.1 2801827 2802636 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(2801827..2802636) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143362.1 CDS hycI NC_011147.1 2802663 2803100 R involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease complement(2802663..2803100) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143363.1 CDS SSPA2518 NC_011147.1 2803126 2803536 R similar to Salmonella typhi CT18 formate hydrogenlyase maturation protein; formate hydrogenlyase maturation protein complement(2803126..2803536) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143364.1 CDS SSPA2519 NC_011147.1 2803533 2804300 R similar to Salmonella typhi CT18 formate hydrogenlyase subunit 7; formate hydrogenlyase subunit 7 complement(2803533..2804300) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143365.1 CDS SSPA2520 NC_011147.1 2804300 2804842 R 'electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate'; formate hydrogenlyase complex iron-sulfur subunit complement(2804300..2804842) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143366.1 CDS SSPA2521 NC_011147.1 2804852 2806561 R similar to Salmonella typhi CT18 formate hydrogenlyase subunit 5; formate hydrogenlyase subunit 5 complement(2804852..2806561) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143367.1 CDS SSPA2522 NC_011147.1 2806579 2807502 R similar to Salmonella typhi CT18 formate hydrogenlyase subunit 4; formate hydrogenlyase subunit 4 complement(2806579..2807502) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143368.1 CDS SSPA2523 NC_011147.1 2807505 2809331 R 'catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3)'; formate hydrogenlyase subunit 3 complement(2807505..2809331) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143369.1 CDS SSPA2524 NC_011147.1 2809331 2809939 R similar to Salmonella typhi CT18 formate hydrogenlyase subunit 2; formate hydrogenlyase subunit 2 complement(2809331..2809939) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143370.1 CDS SSPA2525 NC_011147.1 2810085 2810546 R regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; formate hydrogenlyase regulatory protein HycA complement(2810085..2810546) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143371.1 CDS hypA NC_011147.1 2810756 2811112 D plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 2810756..2811112 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143372.1 CDS SSPA2527 NC_011147.1 2811182 2812054 D GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB 2811182..2812054 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143373.1 CDS SSPA2528 NC_011147.1 2812045 2812317 D 'HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase'; hydrogenase assembly chaperone 2812045..2812317 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143374.1 CDS SSPA2529 NC_011147.1 2812317 2813438 D similar to Salmonella typhi CT18 hydrogenase isoenzymes formation protein HypD; hydrogenase expression/formation protein HypD 2812317..2813438 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143375.1 CDS SSPA2530 NC_011147.1 2813477 2814445 D similar to Salmonella typhi CT18 hydrogenase isoenzymes formation protein HypE; hydrogenase isoenzymes formation protein HypE 2813477..2814445 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143376.1 CDS SSPA2531 NC_011147.1 2814664 2816742 D similar to Salmonella typhi CT18 transcriptional activator of the formate hydrogenlyase system; transcriptional activator of the formate hydrogenlyase system 2814664..2816742 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143377.1 CDS SSPA2532 NC_011147.1 2816804 2817148 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2816804..2817148) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143378.1 CDS SSPA2533 NC_011147.1 2817330 2818247 D 'similar to Salmonella typhi CT18 Iron transport protein, periplasmic-binding protein'; Iron transporter periplasmic-binding protein 2817330..2818247 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143379.1 CDS SSPA2534 NC_011147.1 2818244 2819065 D 'similar to Salmonella typhi CT18 Iron transport protein, ATP-binding component'; Iron transporter ATP-binding protein 2818244..2819065 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143380.1 CDS SSPA2535 NC_011147.1 2819062 2819922 D 'similar to Salmonella typhi CT18 Iron transport protein, inner membrane component'; Iron transporter inner membrane protein 2819062..2819922 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143381.1 CDS SSPA2536 NC_011147.1 2819913 2820761 D 'similar to Salmonella typhi CT18 Iron transport protein, inner membrane component'; Iron transporter inner membrane protein 2819913..2820761 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143382.1 CDS SSPA2537 NC_011147.1 2820733 2820942 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2820733..2820942 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143383.1 CDS SSPA2538 NC_011147.1 2821038 2821793 R similar to Salmonella typhi CT18 possible AraC-family transcriptional regulator; AraC family transcriptional regulator complement(2821038..2821793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143384.1 CDS SSPA2539 NC_011147.1 2822178 2823065 R similar to Salmonella typhi Ty2 possible AraC-family transcriptional regulator; AraC family transcriptional regulator complement(2822178..2823065) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143385.1 CDS SSPA2540 NC_011147.1 2823411 2823863 R similar to Salmonella typhi CT18 hypothetical protein found within S. typhi pathogenicity island 1; hypothetical protein complement(2823411..2823863) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143386.1 CDS SSPA2541 NC_011147.1 2823879 2824550 R similar to Salmonella typhi Ty2 oxygen-regulated invasion protein; oxygen-regulated invasion protein complement(2823879..2824550) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143387.1 CDS SSPA2542 NC_011147.1 2824507 2825085 R similar to Salmonella typhi Ty2 oxygen-regulated invasion protein; oxygen-regulated invasion protein complement(2824507..2825085) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143388.1 CDS SSPA2543 NC_011147.1 2825078 2825836 R similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein complement(2825078..2825836) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143389.1 CDS SSPA2544 NC_011147.1 2825833 2826138 R similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein complement(2825833..2826138) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143390.1 CDS SSPA2545 NC_011147.1 2826157 2826399 R similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein complement(2826157..2826399) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143391.1 CDS SSPA2546 NC_011147.1 2826424 2827602 R similar to Salmonella typhi CT18 pathogenicity 1 island effector protein; pathogenicity island 1 effector protein complement(2826424..2827602) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143392.1 CDS SSPA2547 NC_011147.1 2827918 2828847 D similar to Salmonella typhi CT18 AraC-family transcriptional regulator; araC family transcriptional regulator 2827918..2828847 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143393.1 CDS SSPA2548 NC_011147.1 2829938 2831599 D Activates the expression of invasion genes and activates the expression of prgHIJK which is part of the pathogenicity island 1 type III secretion system; invasion protein regulator 2829938..2831599 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143394.1 CDS SSPA2549 NC_011147.1 2831617 2832099 D similar to Salmonella typhi CT18 cell invasion protein; cell invasion protein 2831617..2832099 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143395.1 CDS SSPA2550 NC_011147.1 2832153 2833784 R stpA-like protein complement(2832153..2833784) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143396.1 CDS SSPA2551 NC_011147.1 2833771 2834121 R similar to Salmonella typhi CT18 chaperone (associated with virulence); chaperone complement(2833771..2834121) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143397.1 CDS SSPA2552 NC_011147.1 2834190 2834450 R similar to Salmonella typhi CT18 doubtful CDS found within S. typhi pathogenicity island; hypothetical protein complement(2834190..2834450) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143398.1 CDS SSPA2553 NC_011147.1 2834494 2834742 R carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein complement(2834494..2834742) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143399.1 CDS SSPA2554 NC_011147.1 2834761 2836818 R similar to Salmonella typhi CT18 pathogenicity island 1 effector protein (function unknown); pathogenicity island 1 effector protein complement(2834761..2836818) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143400.1 CDS SSPA2555 NC_011147.1 2836837 2837859 R similar to Salmonella typhi CT18 pathogenicity island 1 effector protein; pathogenicity island 1 effector protein complement(2836837..2837859) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143401.1 CDS SSPA2556 NC_011147.1 2837929 2839158 R similar to Salmonella typhi CT18 pathogenicity island 1 effector protein; pathogenicity island 1 effector protein complement(2837929..2839158) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143402.1 CDS SSPA2557 NC_011147.1 2839186 2840967 R similar to Salmonella typhi CT18 pathogenicity island 1 effector protein; pathogenicity island 1 effector protein complement(2839186..2840967) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143403.1 CDS SSPA2558 NC_011147.1 2840970 2841467 R similar to Salmonella typhi Ty2 unknown function; hypothetical protein complement(2840970..2841467) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143404.1 CDS SSPA2559 NC_011147.1 2841605 2842675 R Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins; surface presentation of antigens protein SpaS complement(2841605..2842675) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143405.1 CDS SSPA2560 NC_011147.1 2842662 2843453 R similar to Salmonella typhi CT18 secretory protein (associated with virulence); virulence secretory protein complement(2842662..2843453) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143406.1 CDS SSPA2561 NC_011147.1 2843457 2843717 R similar to Salmonella typhi CT18 secretory protein (associated with virulence); virulence secretory protein complement(2843457..2843717) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143407.1 CDS spaP NC_011147.1 2843743 2844417 R part of a type III secretory system probably involved in invasion into eukaryotic cells; surface presentation of antigens protein SpaP complement(2843743..2844417) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143408.1 CDS SSPA2563 NC_011147.1 2844407 2845318 R involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; surface presentation of antigens protein SpaO complement(2844407..2845318) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143409.1 CDS SSPA2564 NC_011147.1 2845318 2846328 R similar to Salmonella typhi Ty2 antigen presentation protein SpaN; antigen presentation protein SpaN complement(2845318..2846328) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143410.1 CDS SSPA2565 NC_011147.1 2846328 2846771 R similar to Salmonella typhi Ty2 virulence-associated secretory protein; virulence-associated secretory protein complement(2846328..2846771) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143411.1 CDS SSPA2566 NC_011147.1 2846749 2848044 R Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase; ATP synthase SpaL complement(2846749..2848044) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143412.1 CDS SSPA2567 NC_011147.1 2848041 2848448 R similar to Salmonella typhi Ty2 virulence-associated secretory protein; virulence-associated secretory protein complement(2848041..2848448) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143413.1 CDS SSPA2568 NC_011147.1 2848472 2850529 R similar to Salmonella typhi CT18 possible secretory protein (associated with virulence); hypothetical protein complement(2848472..2850529) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143414.1 CDS SSPA2569 NC_011147.1 2850554 2851672 R similar to Salmonella typhi CT18 cell invasion protein; cell invasion protein complement(2850554..2851672) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143415.1 CDS SSPA2570 NC_011147.1 2851669 2853357 R similar to Salmonella typhi CT18 secretory protein (associated with virulence); virulence secretory protein complement(2851669..2853357) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143416.2 CDS SSPA2571 NC_011147.1 2853354 2854103 R similar to Salmonella typhi CT18 possible AraC-family regulatory protein; AraC-family regulatory protein complement(2853354..2854103) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143417.1 CDS SSPA2572 NC_011147.1 2854460 2854903 D similar to Salmonella typhi CT18 cell adherance/invasion protein; cell adherance/invasion protein 2854460..2854903 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143418.1 CDS SSPA2573 NC_011147.1 2855298 2855516 D similar to |38639584|ref|NP_943353.1| hypothetical protein LV097 [Klebsiella pneumoniae]; hypothetical protein 2855298..2855516 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143419.1 CDS SSPA2574 NC_011147.1 2855786 2856067 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2855786..2856067 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143420.1 CDS SSPA2575 NC_011147.1 2856067 2856591 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2856067..2856591 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143421.1 CDS SSPA2576 NC_011147.1 2858144 2858329 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2858144..2858329) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143422.1 CDS SSPA2577 NC_011147.1 2858338 2858664 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2858338..2858664) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143423.1 CDS SSPA2578 NC_011147.1 2858865 2861390 D This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 2858865..2861390 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143424.2 CDS SSPA2579 NC_011147.1 2861446 2861826 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2861446..2861826) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143425.1 CDS SSPA2580 NC_011147.1 2861823 2863031 R similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein complement(2861823..2863031) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143426.1 CDS SSPA2581 NC_011147.1 2863140 2864051 D similar to Salmonella typhi CT18 possible LysR-family transcriptional regulator; LysR family transcriptional regulator 2863140..2864051 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143427.1 CDS SSPA2582 NC_011147.1 2864093 2865589 R similar to Salmonella typhi CT18 possible permease; permease complement(2864093..2865589) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143428.1 CDS SSPA2583 NC_011147.1 2865586 2866536 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2865586..2866536) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143429.1 CDS SSPA2584 NC_011147.1 2866576 2867301 R hypothetical protein complement(2866576..2867301) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143430.1 CDS SSPA2585 NC_011147.1 2867306 2867944 R similar to Salmonella typhi CT18 possible sugar aldolase; aldolase complement(2867306..2867944) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143431.1 CDS SSPA2586 NC_011147.1 2867941 2869203 R similar to |32470068|ref|NP_863010.1| protein [Escherichia coli]; hypothetical protein complement(2867941..2869203) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143432.1 CDS SSPA2587 NC_011147.1 2869197 2870120 R similar to Salmonella typhimurium 3-hydroxyisobutyrate dehydrogenase; 3-hydroxyisobutyrate dehydrogenase complement(2869197..2870120) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143433.1 CDS SSPA2588 NC_011147.1 2870317 2871081 D similar to Salmonella typhi CT18 DeoR-family trancriptional regulator; DeoR-family transcriptional regulator 2870317..2871081 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143434.1 CDS SSPA2589 NC_011147.1 2871100 2871504 R slyA-like protein complement(2871100..2871504) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143435.1 CDS SSPA2590 NC_011147.1 2871675 2873696 D hypothetical protein 2871675..2873696 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143436.1 CDS SSPA2591 NC_011147.1 2873707 2873943 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2873707..2873943 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143437.1 CDS SSPA2592 NC_011147.1 2873988 2874980 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS complement(2873988..2874980) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143438.1 CDS nlpD NC_011147.1 2875043 2876176 R outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD complement(2875043..2876176) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143439.1 CDS pcm NC_011147.1 2876352 2876978 R catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase complement(2876352..2876978) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143440.1 CDS surE NC_011147.1 2876972 2877733 R catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE complement(2876972..2877733) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143441.1 CDS truD NC_011147.1 2877714 2878763 R catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D complement(2877714..2878763) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143442.1 CDS ispF NC_011147.1 2878760 2879239 R 'catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate'; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(2878760..2879239) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143443.1 CDS ispD NC_011147.1 2879239 2879949 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(2879239..2879949) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143444.1 CDS ftsB NC_011147.1 2879968 2880279 R forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB complement(2879968..2880279) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143445.1 CDS SSPA2600 NC_011147.1 2880470 2880793 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2880470..2880793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143446.1 CDS SSPA2601 NC_011147.1 2880844 2881449 R converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase complement(2880844..2881449) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143447.1 CDS cysN NC_011147.1 2881436 2882875 R may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 complement(2881436..2882875) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143448.1 CDS SSPA2603 NC_011147.1 2882885 2883793 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2882885..2883793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143449.1 CDS SSPA2604 NC_011147.1 2885645 2885938 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2885645..2885938) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143450.1 CDS SSPA2605 NC_011147.1 2885968 2886858 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2885968..2886858) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143451.1 CDS SSPA2606 NC_011147.1 2886858 2887562 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2886858..2887562) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143452.1 CDS SSPA2607 NC_011147.1 2887562 2888287 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2887562..2888287) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143453.1 CDS SSPA2608 NC_011147.1 2888297 2889355 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2888297..2889355) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143454.1 CDS SSPA2609 NC_011147.1 2889378 2889980 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2889378..2889980) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144952.1 CDS SSPA2609b NC_011147.1 2891890 2894589 D helicase 2891890..2894589 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143455.1 CDS SSPA2610 NC_011147.1 2894969 2895922 D similar to Salmonella typhi CT18 possible secreted protein; hypothetical protein 2894969..2895922 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143456.1 CDS SSPA2611 NC_011147.1 2896010 2896744 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2896010..2896744) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143457.1 CDS SSPA2612 NC_011147.1 2896820 2898532 R hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta complement(2896820..2898532) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143458.2 CDS SSPA2613 NC_011147.1 2898532 2900331 R similar to Salmonella typhi CT18 sulfite reductase (NADPH) flavoprotein beta subunit; sulfite reductase (NADPH) flavoprotein subunit beta complement(2898532..2900331) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143459.1 CDS SSPA2614 NC_011147.1 2900767 2901129 D similar to Salmonella typhi CT18 6-pyruvoyl tetrahydrobiopterin synthase; 6-pyruvoyl tetrahydrobiopterin synthase 2900767..2901129 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143460.1 CDS SSPA2615 NC_011147.1 2902619 2903290 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2902619..2903290) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143461.1 CDS eno NC_011147.1 2903426 2904724 R enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase complement(2903426..2904724) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143462.1 CDS pyrG NC_011147.1 2904807 2906444 R CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase complement(2904807..2906444) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143463.1 CDS mazG NC_011147.1 2906672 2907472 R functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase complement(2906672..2907472) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143464.1 CDS SSPA2619 NC_011147.1 2908081 2908668 D similar to Salmonella typhimurium fimbrial subunit; fimbrial subunit 2908081..2908668 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143465.1 CDS SSPA2620 NC_011147.1 2908802 2911447 D similar to Salmonella typhi Ty2 outer membrane usher protein; outer membrane usher protein 2908802..2911447 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143466.1 CDS SSPA2621 NC_011147.1 2911460 2912233 D similar to Salmonella typhi Ty2 periplasmic fimbrial chaperone; periplasmic fimbrial chaperone 2911460..2912233 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143467.1 CDS SSPA2622 NC_011147.1 2912259 2912759 D similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2912259..2912759 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143468.1 CDS SSPA2623 NC_011147.1 2912774 2913244 D similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2912774..2913244 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143469.1 CDS SSPA2624 NC_011147.1 2913241 2913777 D similar to Salmonella typhi Ty2 fimbrial subunit; fimbrial subunit 2913241..2913777 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143470.1 CDS SSPA2625 NC_011147.1 2913836 2914954 D similar to Salmonella typhi CT18 possible secreted protein; hypothetical protein 2913836..2914954 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143471.1 CDS SSPA2626 NC_011147.1 2915561 2916391 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 2915561..2916391 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143472.1 CDS SSPA2627 NC_011147.1 2917100 2917387 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2917100..2917387) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143473.1 CDS relA NC_011147.1 2917540 2919774 R (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase complement(2917540..2919774) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143474.1 CDS rumA NC_011147.1 2919826 2921121 R in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase complement(2919826..2921121) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143475.1 CDS SSPA2630 NC_011147.1 2921179 2923935 D part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 2921179..2923935 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143476.1 CDS SSPA2631 NC_011147.1 2923979 2925121 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2923979..2925121) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143477.1 CDS SSPA2632 NC_011147.1 2925199 2926536 R similar to Salmonella typhi Ty2 probable glucarate dehydratase 1; glucarate dehydratase complement(2925199..2926536) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143478.1 CDS SSPA2633 NC_011147.1 2928371 2928820 R 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group'; flavodoxin complement(2928371..2928820) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143479.1 CDS SSPA2634 NC_011147.1 2928839 2929621 R catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C complement(2928839..2929621) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143480.1 CDS SSPA2635 NC_011147.1 2929621 2929950 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2929621..2929950) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143481.1 CDS SSPA2636 NC_011147.1 2930562 2931107 R SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd complement(2930562..2931107) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143482.1 CDS queF NC_011147.1 2931176 2932024 D catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2931176..2932024 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143483.1 CDS SSPA2638 NC_011147.1 2932167 2933501 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2932167..2933501 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143484.1 CDS SSPA2639 NC_011147.1 2934066 2935355 D similar to Salmonella typhi CT18 serine transporter; serine transporter 2934066..2935355 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143485.1 CDS SSPA2640 NC_011147.1 2935414 2936781 D similar to Salmonella typhi CT18 L-serine dehydratase 2 (L-serine deaminase 2); L-serine dehydratase 2 2935414..2936781 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143486.2 CDS xni NC_011147.1 2936892 2937707 D has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 2936892..2937707 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143487.1 CDS SSPA2643 NC_011147.1 2937799 2938947 R 'similar to Salmonella typhi CT18 1,2-propanediol oxidoreductase (lactaldehyde reductase)'; L-1,2-propanediol oxidoreductase complement(2937799..2938947) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143488.1 CDS SSPA2644 NC_011147.1 2938964 2939611 R catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; L-fuculose phosphate aldolase complement(2938964..2939611) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143489.1 CDS SSPA2645 NC_011147.1 2940167 2941477 D similar to Salmonella typhi Ty2 L-fucose permease; L-fucose transporter 2940167..2941477 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143490.1 CDS fucI NC_011147.1 2941509 2943284 D catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; L-fucose isomerase 2941509..2943284 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143491.1 CDS SSPA2647 NC_011147.1 2943385 2944803 D similar to Salmonella typhi CT18 L-fuculose kinase; L-fuculokinase 2943385..2944803 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143492.1 CDS SSPA2648 NC_011147.1 2944805 2945227 D similar to Salmonella typhi CT18 fuscose operon fucU protein; fuscose operon fucU protein 2944805..2945227 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143493.1 CDS SSPA2649 NC_011147.1 2945285 2945995 D regulates expression of genes involved in L-fucose utilization; DNA-binding transcriptional activator FucR 2945285..2945995 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143494.1 CDS SSPA2650 NC_011147.1 2946054 2947154 R similar to Salmonella typhi CT18 conserved hypothetical protein; RNA 2'-O-ribose methyltransferase complement(2946054..2947154) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143495.1 CDS SSPA2651 NC_011147.1 2947147 2947542 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2947147..2947542) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143496.1 CDS SSPA2652 NC_011147.1 2947561 2948478 R Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA complement(2947561..2948478) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143497.1 CDS SSPA2653 NC_011147.1 2948825 2949052 R similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein complement(2948825..2949052) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143498.1 CDS SSPA2654 NC_011147.1 2949245 2950450 D similar to Salmonella typhi CT18 possible aminotransferase; cysteine sulfinate desulfinase 2949245..2950450 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143499.1 CDS SSPA2655 NC_011147.1 2950450 2950893 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2950450..2950893 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143500.1 CDS SSPA2656 NC_011147.1 2951166 2952080 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2951166..2952080 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143501.1 CDS SSPA2657 NC_011147.1 2952132 2952938 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2952132..2952938) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143502.1 CDS mltA NC_011147.1 2953048 2954145 R 'membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues'; murein transglycosylase A complement(2953048..2954145) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143503.1 CDS SSPA2659 NC_011147.1 2954648 2955901 R similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(2954648..2955901) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143504.1 CDS SSPA2660 NC_011147.1 2956134 2957465 D catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 2956134..2957465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143505.1 CDS recD NC_011147.1 2957567 2959402 R helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha complement(2957567..2959402) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143506.1 CDS recB NC_011147.1 2959399 2962944 R helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta complement(2959399..2962944) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143507.1 CDS SSPA2663 NC_011147.1 2962937 2965825 R similar to Salmonella typhi CT18 protease III precursor (pitrilysin); protease III complement(2962937..2965825) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143508.1 CDS recC NC_011147.1 2966003 2969374 R catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma complement(2966003..2969374) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143509.1 CDS SSPA2665 NC_011147.1 2969390 2969710 R similar to Salmonella typhi CT18 prepilin peptidase dependent protein C precursor; hypothetical protein complement(2969390..2969710) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143510.1 CDS SSPA2666 NC_011147.1 2969695 2970102 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2969695..2970102) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143511.1 CDS SSPA2667 NC_011147.1 2970099 2970662 R similar to Salmonella typhi CT18 prepilin peptidase dependent protein B precursor; hypothetical protein complement(2970099..2970662) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143512.1 CDS SSPA2668 NC_011147.1 2970653 2971123 R similar to Salmonella typhi CT18 prepilin peptidase dependent protein A precursor; hypothetical protein complement(2970653..2971123) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143513.1 CDS thyA NC_011147.1 2971308 2972102 R 'ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived'; thymidylate synthase complement(2971308..2972102) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143514.1 CDS SSPA2670 NC_011147.1 2972109 2972984 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2972109..2972984) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143515.1 CDS SSPA2671 NC_011147.1 2973265 2973447 D hypothetical protein 2973265..2973447 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143516.1 CDS SSPA2673 NC_011147.1 2973401 2975647 R member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein complement(2973401..2975647) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143517.1 CDS SSPA2674 NC_011147.1 2975660 2976190 R hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase complement(2975660..2976190) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143518.1 CDS SSPA2675 NC_011147.1 2976873 2977568 D MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 2976873..2977568 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143519.1 CDS SSPA2676 NC_011147.1 2977750 2978463 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 2977750..2978463 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143520.1 CDS SSPA2677 NC_011147.1 2978633 2978851 D similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein 2978633..2978851 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143521.1 CDS tas NC_011147.1 2979042 2980082 D complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo-keto reductase 2979042..2980082 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143522.1 CDS SSPA2679 NC_011147.1 2980169 2981371 R similar to Salmonella typhi CT18 membrane protein; lysophospholipid transporter LplT complement(2980169..2981371) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143523.1 CDS SSPA2680 NC_011147.1 2981364 2983523 R Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase complement(2981364..2983523) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143524.1 CDS SSPA2681 NC_011147.1 2983916 2984944 D controls transcription of galETKM; DNA-binding transcriptional regulator GalR 2983916..2984944 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143525.1 CDS SSPA2682 NC_011147.1 2984958 2985977 D similar to Salmonella typhi CT18 possible regulatory protein; regulatory protein 2984958..2985977 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143526.1 CDS SSPA2683 NC_011147.1 2985987 2987249 R catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase complement(2985987..2987249) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143527.1 CDS SSPA2684 NC_011147.1 2987367 2988302 D activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; DNA-binding transcriptional regulator LysR 2987367..2988302 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143528.1 CDS SSPA2685 NC_011147.1 2988274 2988954 R similar to Salmonella typhi CT18 conserved hypothetical protein; racemase complement(2988274..2988954) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143529.1 CDS SSPA2686 NC_011147.1 2989094 2990509 R similar to Salmonella typhi CT18 L-arabinose isomerase; L-arabinose isomerase complement(2989094..2990509) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143530.1 CDS SSPA2687 NC_011147.1 2990863 2991624 R catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase complement(2990863..2991624) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143531.1 CDS SSPA2688 NC_011147.1 2991681 2992517 R '4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate'; 5-keto-4-deoxyuronate isomerase complement(2991681..2992517) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143532.1 CDS SSPA2689 NC_011147.1 2992947 2994125 R 'Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis'; acetyl-CoA acetyltransferase complement(2992947..2994125) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143533.1 CDS SSPA2690 NC_011147.1 2994248 2995111 R similar to Salmonella typhi CT18 possible regulatory protein; regulatory protein complement(2994248..2995111) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143534.1 CDS SSPA2691 NC_011147.1 2995188 2995670 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 2995188..2995670 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143535.1 CDS SSPA2692 NC_011147.1 2995812 2997041 D similar to Salmonella typhi CT18 probable amino acid transport protein; amino acid transport protein 2995812..2997041 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143536.1 CDS SSPA2693 NC_011147.1 2997072 2997344 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(2997072..2997344) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143537.1 CDS SSPA2694 NC_011147.1 2997473 2998309 D membrane protein conferring nickel and cobalt resistance; nickel/cobalt efflux protein RcnA 2997473..2998309 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143538.2 CDS SSPA2695 NC_011147.1 2998524 2999282 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2998524..2999282) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143539.1 CDS SSPA2696 NC_011147.1 2999269 2999781 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(2999269..2999781) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143540.1 CDS SSPA2697 NC_011147.1 2999926 3000993 R hypothetical protein complement(2999926..3000993) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143541.1 CDS SSPA2698 NC_011147.1 3000990 3001733 R similar to Salmonella typhi CT18 probable fimbrial chaperone protein; fimbrial chaperone protein complement(3000990..3001733) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143542.1 CDS SSPA2699 NC_011147.1 3001774 3004263 R similar to Salmonella typhi CT18 probable outer membrane fimbrial usher protein; outer membrane fimbrial usher protein complement(3001774..3004263) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143543.1 CDS SSPA2700 NC_011147.1 3004383 3004967 R similar to Salmonella typhi CT18 probable fimbrial protein; fimbrial protein complement(3004383..3004967) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143544.1 CDS SSPA2701 NC_011147.1 3005685 3006284 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3005685..3006284) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143545.1 CDS SSPA2702 NC_011147.1 3007579 3008037 R IS200 transposase complement(3007579..3008037) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143546.1 CDS SSPA2703 NC_011147.1 3008418 3008816 R stability determinant protein; plasmid maintenance protein complement(3008418..3008816) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143547.1 CDS SSPA2704 NC_011147.1 3008816 3009043 R similar to Salmonella typhi CT18 hypothetical protein (assiciated with virulence); hypothetical protein complement(3008816..3009043) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143548.1 CDS SSPA2705 NC_011147.1 3009252 3009503 D similar to Salmonella typhi CT18 endonuclease fragment; endonuclease fragment 3009252..3009503 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143549.1 CDS SSPA2706 NC_011147.1 3009784 3010584 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3009784..3010584 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143550.1 CDS SSPA2707 NC_011147.1 3010869 3011621 R similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein complement(3010869..3011621) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143551.1 CDS SSPA2708 NC_011147.1 3011892 3012437 D catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; isopentenyl-diphosphate delta-isomerase 3011892..3012437 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143552.1 CDS lysS NC_011147.1 3012513 3014030 R 'class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1'; lysyl-tRNA synthetase complement(3012513..3014030) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143553.1 CDS prfB NC_011147.1 3014040 3015138 R recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 complement(join(3014040..3015062,3015064..3015138)) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143554.1 CDS SSPA2712 NC_011147.1 3015243 3016976 R 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ complement(3015243..3016976) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143555.1 CDS SSPA2713 NC_011147.1 3016982 3017644 R DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC complement(3016982..3017644) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143556.1 CDS xerD NC_011147.1 3017719 3018615 R site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD complement(3017719..3018615) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143557.1 CDS SSPA2715 NC_011147.1 3018728 3019249 D 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic'; flavodoxin FldB 3018728..3019249 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143558.1 CDS SSPA2716 NC_011147.1 3019302 3019661 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3019302..3019661) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143559.1 CDS SSPA2717 NC_011147.1 3019696 3019962 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3019696..3019962) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143560.1 CDS SSPA2718 NC_011147.1 3020212 3021192 D physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator 3020212..3021192 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143561.1 CDS SSPA2719 NC_011147.1 3021308 3021967 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3021308..3021967) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143562.1 CDS SSPA2720 NC_011147.1 3022132 3022443 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3022132..3022443) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143563.1 CDS SSPA2721 NC_011147.1 3022602 3024035 D similar to Salmonella typhi CT18 6-phospho-beta-glucosidase; 6-phospho-beta-glucosidase 3022602..3024035 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143564.1 CDS SSPA2722 NC_011147.1 3024083 3024976 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3024083..3024976) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143565.2 CDS SSPA2723 NC_011147.1 3025432 3028305 R acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase complement(3025432..3028305) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143566.1 CDS SSPA2724 NC_011147.1 3028468 3028857 R 'part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor'; glycine cleavage system protein H complement(3028468..3028857) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143567.1 CDS gcvT NC_011147.1 3028883 3029977 R 'catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein'; glycine cleavage system aminomethyltransferase T complement(3028883..3029977) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143568.1 CDS SSPA2726 NC_011147.1 3030432 3031634 R similar to Salmonella typhi CT18 possible monooxygenase; hypothetical protein complement(3030432..3031634) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143569.1 CDS SSPA2727 NC_011147.1 3031759 3032937 R 'Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone'; 2-octaprenyl-6-methoxyphenyl hydroxylase complement(3031759..3032937) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143570.2 CDS SSPA2728 NC_011147.1 3032934 3034250 R exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II complement(3032934..3034250) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143571.1 CDS SSPA2729 NC_011147.1 3034276 3034860 R the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein complement(3034276..3034860) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143572.1 CDS SSPA2730 NC_011147.1 3035021 3035350 D similar to Salmonella typhi CT18 conserved hypothetical protein; Z-ring-associated protein 3035021..3035350 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143573.2 CDS SSPA2731 NC_011147.1 3035644 3036192 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3035644..3036192 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143574.1 CDS SSPA2732 NC_011147.1 3036573 3037805 R catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase complement(3036573..3037805) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143575.1 CDS SSPA2733 NC_011147.1 3038072 3038731 R Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A complement(3038072..3038731) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143576.1 CDS SSPA2734 NC_011147.1 3038885 3039778 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 3038885..3039778 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143577.1 CDS SSPA2735 NC_011147.1 3040044 3040790 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3040044..3040790) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143578.1 CDS SSPA2736 NC_011147.1 3040884 3041519 R Involved in the export of arginine; arginine exporter protein complement(3040884..3041519) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143579.1 CDS SSPA2737 NC_011147.1 3041720 3042580 R participates in the regulation of osmotic pressure changes within the cel; mechanosensitive channel MscS complement(3041720..3042580) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143580.1 CDS SSPA2738 NC_011147.1 3042803 3043882 R 'catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate'; fructose-bisphosphate aldolase complement(3042803..3043882) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143581.1 CDS pgk NC_011147.1 3043984 3045147 R Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase complement(3043984..3045147) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143582.1 CDS SSPA2740 NC_011147.1 3045169 3046215 R NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase complement(3045169..3046215) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143583.1 CDS SSPA2741 NC_011147.1 3046589 3047014 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3046589..3047014 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143584.1 CDS SSPA2742 NC_011147.1 3047040 3047618 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3047040..3047618 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143585.2 CDS SSPA2743 NC_011147.1 3047619 3048326 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3047619..3048326 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143586.1 CDS SSPA2744 NC_011147.1 3048308 3048991 D 'similar to Salmonella typhi CT18 possible ABC-transport protein, ATP-binding component'; ABC-transport protein ATP-binding protein 3048308..3048991 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143587.1 CDS SSPA2745 NC_011147.1 3048985 3049641 D 'similar to Salmonella typhi CT18 possible ABC-transport protein, ATP-binding component'; ABC-transport protein ATP-binding protein 3048985..3049641 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143588.1 CDS SSPA2746 NC_011147.1 3049685 3051676 R 'catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase'; transketolase complement(3049685..3051676) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143589.1 CDS SSPA2747 NC_011147.1 3051952 3052710 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3051952..3052710 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143590.1 CDS SSPA2748 NC_011147.1 3052811 3053731 R catalyzes the formation of putrescine from agmatine; agmatinase complement(3052811..3053731) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143591.2 CDS SSPA2749 NC_011147.1 3053959 3055935 R catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase complement(3053959..3055935) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143592.1 CDS SSPA2750 NC_011147.1 3055944 3056075 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3055944..3056075) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143593.1 CDS SSPA2751 NC_011147.1 3056385 3056576 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3056385..3056576 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143594.1 CDS SSPA2752 NC_011147.1 3056725 3057879 D catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3056725..3057879 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143595.1 CDS SSPA2753 NC_011147.1 3058372 3059766 D similar to Salmonella typhi CT18 galactose-proton symport (galactose transporter); galactose-proton symporter 3058372..3059766 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143596.1 CDS SSPA2754 NC_011147.1 3059845 3060342 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3059845..3060342 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143597.1 CDS SSPA2755 NC_011147.1 3060437 3061144 D similar to Salmonella typhi CT18 endonuclease I; endonuclease I 3060437..3061144 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143598.1 CDS SSPA2756 NC_011147.1 3061221 3061952 D 'in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase'; 16S ribosomal RNA methyltransferase RsmE 3061221..3061952 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143599.1 CDS SSPA2757 NC_011147.1 3061972 3062919 D 'catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione'; glutathione synthetase 3061972..3062919 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143600.1 CDS SSPA2758 NC_011147.1 3063135 3063698 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3063135..3063698 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143601.1 CDS SSPA2759 NC_011147.1 3063698 3064114 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; holliday junction resolvase-like protein 3063698..3064114 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143602.1 CDS SSPA2760 NC_011147.1 3064161 3064847 R global regulatory protein-like protein complement(3064161..3064847) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143603.1 CDS SSPA2761 NC_011147.1 3064979 3065959 R 'similar to Salmonella typhi Ty2 Type II secretion,ATP-binding, protein'; type II secretion, ATP-binding, protein complement(3064979..3065959) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143604.1 CDS SSPA2762 NC_011147.1 3065977 3066681 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3065977..3066681 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143605.1 CDS SSPA2763 NC_011147.1 3066700 3067266 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3066700..3067266 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143606.1 CDS SSPA2764 NC_011147.1 3067263 3067553 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3067263..3067553 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143607.1 CDS SSPA2765 NC_011147.1 3067561 3068154 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 3067561..3068154 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143608.1 CDS SSPA2766 NC_011147.1 3068147 3069283 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3068147..3069283 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143609.1 CDS SSPA2767 NC_011147.1 3069374 3070381 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3069374..3070381) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143610.1 CDS ansB NC_011147.1 3070514 3071560 R 'catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis'; L-asparaginase II complement(3070514..3071560) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143611.1 CDS SSPA2769 NC_011147.1 3071749 3072465 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3071749..3072465) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143612.1 CDS SSPA2770 NC_011147.1 3072518 3072844 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3072518..3072844) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143613.1 CDS trmB NC_011147.1 3072844 3073563 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(3072844..3073563) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143614.1 CDS SSPA2772 NC_011147.1 3073718 3074770 D similar to Salmonella typhi CT18 A/G-specific adenine glycosylase; adenine DNA glycosylase 3073718..3074770 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143615.1 CDS SSPA2773 NC_011147.1 3074798 3075073 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3074798..3075073 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143616.1 CDS mltC NC_011147.1 3075186 3076271 D 'Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues'; murein transglycosylase C 3075186..3076271 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143617.1 CDS SSPA2775 NC_011147.1 3076488 3077744 D similar to Salmonella typhi CT18 nucleoside permease; nucleoside permease 3076488..3077744 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143618.1 CDS SSPA2776 NC_011147.1 3077806 3079932 R similar to Salmonella typhimurium ornithine decarboxylase isozyme; ornithine decarboxylase complement(3077806..3079932) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143619.1 CDS SSPA2777 NC_011147.1 3080366 3081073 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3080366..3081073 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143620.1 CDS SSPA2778 NC_011147.1 3082477 3082596 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3082477..3082596 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143621.1 CDS SSPA2779 NC_011147.1 3082805 3082993 D hypothetical protein 3082805..3082993 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143622.1 CDS SSPA2780 NC_011147.1 3082983 3083279 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3082983..3083279 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143623.1 CDS SSPA2781 NC_011147.1 3083663 3083929 D similar to Salmonella typhi CT18 bacteriocin immunity protein; bacteriocin immunity protein 3083663..3083929 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143624.1 CDS SSPA2782 NC_011147.1 3084172 3084450 D similar to Salmonella typhi CT18 bacteriocin immunity protein; bacteriocin immunity protein 3084172..3084450 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143625.1 CDS SSPA2783 NC_011147.1 3084853 3085356 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3084853..3085356 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143626.1 CDS SSPA2784 NC_011147.1 3085615 3085800 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3085615..3085800 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143627.1 CDS SSPA2785 NC_011147.1 3085997 3086527 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3085997..3086527 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143628.1 CDS SSPA2786 NC_011147.1 3086529 3087155 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3086529..3087155 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143629.1 CDS SSPA2787 NC_011147.1 3087291 3087461 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3087291..3087461) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143630.1 CDS SSPA2788 NC_011147.1 3087605 3087811 D similar to Salmonella typhi CT18 possible membrane protein; hypothetical protein 3087605..3087811 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143631.1 CDS SSPA2789 NC_011147.1 3087836 3088063 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3087836..3088063) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143632.1 CDS SSPA2790 NC_011147.1 3088589 3089272 D similar to Salmonella typhi CT18 LysR-family transcriptional regulator; LysR family transcriptional regulator 3088589..3089272 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143633.1 CDS SSPA2791 NC_011147.1 3089377 3089901 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3089377..3089901) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143634.1 CDS SSPA2792 NC_011147.1 3089912 3091411 R similar to Salmonella typhi CT18 possible amino acid transport protein; amino acid transport protein complement(3089912..3091411) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143635.2 CDS SSPA2793 NC_011147.1 3091620 3091994 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3091620..3091994) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143636.1 CDS SSPA2794 NC_011147.1 3092009 3093310 R similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase complement(3092009..3093310) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143637.1 CDS SSPA2795 NC_011147.1 3093472 3094956 D similar to Salmonella typhi CT18 possible aldehyde dehydrogenase; aldehyde dehydrogenase 3093472..3094956 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143638.1 CDS iraD NC_011147.1 3095092 3095475 R inhibitor of RssB activity in response to DNA damage; blocks degradation of stationary phase sigma factor RpoS; DNA replication/recombination/repair protein complement(3095092..3095475) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143639.1 CDS SSPA2797 NC_011147.1 3095472 3095957 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3095472..3095957) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143640.1 CDS SSPA2798 NC_011147.1 3096682 3097605 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3096682..3097605) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143641.2 CDS SSPA2799 NC_011147.1 3097644 3098522 R similar to Salmonella typhi CT18 possible hydrolase; hydrolase complement(3097644..3098522) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143642.1 CDS SSPA2800 NC_011147.1 3098918 3100222 R similar to Salmonella typhi CT18 hexuronate transporter; hexuronate transporter complement(3098918..3100222) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143643.1 CDS SSPA2801 NC_011147.1 3100627 3101811 D catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 3100627..3101811 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143644.1 CDS SSPA2802 NC_011147.1 3101922 3103394 D similar to Salmonella typhi CT18 D-mannonate oxidoreductase; D-mannonate oxidoreductase 3101922..3103394 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143645.1 CDS SSPA2803 NC_011147.1 3103406 3104818 D catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 3103406..3104818 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143646.1 CDS SSPA2804 NC_011147.1 3105118 3106173 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3105118..3106173) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143647.1 CDS SSPA2805 NC_011147.1 3106843 3108699 R catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase complement(3106843..3108699) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143648.1 CDS SSPA2806 NC_011147.1 3108926 3109792 D YghU; B2989; one of eight glutathione transferase proteins from E. coli; glutathione S-transferase 3108926..3109792 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143649.1 CDS SSPA2807 NC_011147.1 3109860 3110570 R similar to Salmonella typhi CT18 hypothetical protein; molybdate ABC transporter substrate-binding protein complement(3109860..3110570) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143650.1 CDS SSPA2808 NC_011147.1 3111698 3111946 R similar to Salmonella typhi CT18 hydrogenase-2 component protein; hydrogenase 2 accessory protein HypG complement(3111698..3111946) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143651.1 CDS SSPA2809 NC_011147.1 3111974 3112315 R plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein HybF complement(3111974..3112315) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143652.1 CDS SSPA2810 NC_011147.1 3112308 3112796 R similar to Salmonella typhi CT18 hydrogenase-2 component protein; hydrogenase 2-specific chaperone complement(3112308..3112796) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143653.1 CDS hybD NC_011147.1 3112789 3113283 R protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); hydrogenase 2 maturation endopeptidase complement(3112789..3113283) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143654.1 CDS SSPA2812 NC_011147.1 3113283 3114986 R involved in hydrogen uptake; hydrogenase 2 large subunit complement(3113283..3114986) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143655.1 CDS SSPA2813 NC_011147.1 3114983 3116161 R 'HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits'; hydrogenase 2 b cytochrome subunit complement(3114983..3116161) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143656.1 CDS SSPA2814 NC_011147.1 3116151 3117137 R Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA complement(3116151..3117137) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143657.1 CDS SSPA2815 NC_011147.1 3117140 3118258 R involved in hydrogen uptake; hydrogenase 2 small subunit complement(3117140..3118258) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143658.1 CDS SSPA2816 NC_011147.1 3118448 3118735 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3118448..3118735) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143659.1 CDS SSPA2817 NC_011147.1 3118820 3120463 R similar to |33596128|ref|NP_883771.1| methyl-accepting chemotaxis protein I [Bordetella parapertussis 12822]; hypothetical protein complement(3118820..3120463) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143660.1 CDS SSPA2818 NC_011147.1 3120770 3121264 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3120770..3121264) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143661.1 CDS SSPA2819 NC_011147.1 3121482 3121997 R similar to Salmonella typhimurium ATP-dependent RNA helicase-like protein; ATP-dependent RNA helicase-like protein complement(3121482..3121997) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143662.1 CDS SSPA2820 NC_011147.1 3122089 3122499 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3122089..3122499 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143663.1 CDS SSPA2821 NC_011147.1 3122516 3122890 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3122516..3122890 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143664.1 CDS SSPA2822 NC_011147.1 3123014 3123898 D similar to Salmonella typhi CT18 possible oxidoreductase; oxidoreductase 3123014..3123898 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143665.1 CDS SSPA2823 NC_011147.1 3124011 3124436 R membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbD complement(3124011..3124436) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143666.1 CDS SSPA2824 NC_011147.1 3124443 3125177 R membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbB complement(3124443..3125177) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143667.1 CDS SSPA2825 NC_011147.1 3125170 3125319 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3125170..3125319) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143668.1 CDS SSPA2826 NC_011147.1 3125429 3126616 D catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 3125429..3126616 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143669.1 CDS SSPA2827 NC_011147.1 3126756 3127415 D similar to Salmonella typhi CT18 DedA-family integral membrane protein; DedA-family integral membrane protein 3126756..3127415 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143670.1 CDS SSPA2828 NC_011147.1 3127479 3128396 R similar to Salmonella typhi CT18 probable AraC-family trancriptional regulatory protein; AraC family transcriptional regulator complement(3127479..3128396) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143671.1 CDS SSPA2829 NC_011147.1 3128571 3129734 D similar to Salmonella typhi CT18 probable alcohol dehydrogenase; alcohol dehydrogenase 3128571..3129734 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143672.1 CDS dkgA NC_011147.1 3129840 3130667 D 'methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate'; 2,5-diketo-D-gluconate reductase A 3129840..3130667 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143673.1 CDS SSPA2831 NC_011147.1 3130855 3132318 D similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein 3130855..3132318 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143674.1 CDS SSPA2832 NC_011147.1 3132363 3132818 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3132363..3132818 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143675.1 CDS SSPA2833 NC_011147.1 3132954 3135125 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3132954..3135125) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143676.1 CDS SSPA2834 NC_011147.1 3135259 3136449 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(3135259..3136449) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143677.1 CDS SSPA2835 NC_011147.1 3136745 3138169 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3136745..3138169) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143678.1 CDS SSPA2836 NC_011147.1 3138185 3139168 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3138185..3139168) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143679.1 CDS SSPA2837 NC_011147.1 3140721 3142133 R similar to Salmonella typhi CT18 SufI protein; repressor protein for FtsI complement(3140721..3142133) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143680.1 CDS SSPA2838 NC_011147.1 3142207 3142944 R similar to Salmonella typhi CT18 1-acyl-glycerol-3-phosphate acyltransferase; 1-acylglycerol-3-phosphate O-acyltransferase complement(3142207..3142944) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143681.1 CDS SSPA2839 NC_011147.1 3143201 3145459 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A complement(3143201..3145459) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143682.1 CDS SSPA2840 NC_011147.1 3145570 3146436 R similar to Salmonella typhi CT18 possible AraC-family transcriptional regulator; AraC family transcriptional regulator complement(3145570..3146436) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143683.1 CDS SSPA2841 NC_011147.1 3146508 3146900 R similar to Salmonella typhi CT18 possible exported protein; hypothetical protein complement(3146508..3146900) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143684.1 CDS SSPA2842 NC_011147.1 3147052 3147711 D response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; DNA-binding transcriptional regulator QseB 3147052..3147711 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143685.1 CDS SSPA2843 NC_011147.1 3147708 3149057 D similar to Salmonella typhi CT18 probable two-component system sensor histidine kinase; sensor protein QseC 3147708..3149057 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143686.1 CDS SSPA2844 NC_011147.1 3149164 3149745 D similar to Salmonella typhimurium NADPH specific quinone oxidoreductase (drug modulator); NADPH specific quinone oxidoreductase 3149164..3149745 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143687.1 CDS SSPA2845 NC_011147.1 3149777 3150091 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3149777..3150091 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143688.1 CDS SSPA2846 NC_011147.1 3150216 3152108 R decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B complement(3150216..3152108) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143689.1 CDS SSPA2847 NC_011147.1 3152136 3152717 R Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase YqiA complement(3152136..3152717) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143690.1 CDS SSPA2848 NC_011147.1 3152717 3153544 R similar to Salmonella typhi CT18 conserved hypothetical protein; cyclic 3',5'-adenosine monophosphate phosphodiesterase complement(3152717..3153544) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143691.1 CDS SSPA2849 NC_011147.1 3153569 3153991 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3153569..3153991) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143692.1 CDS nudF NC_011147.1 3153988 3154620 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase NudF complement(3153988..3154620) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143693.1 CDS tolC NC_011147.1 3154821 3156296 D trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 3154821..3156296 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143694.1 CDS SSPA2852 NC_011147.1 3156509 3157180 D similar to Salmonella typhi CT18 possible lipoprotein; hypothetical protein 3156509..3157180 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143695.1 CDS SSPA2853 NC_011147.1 3157186 3158349 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3157186..3158349 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143696.1 CDS SSPA2854 NC_011147.1 3158411 3159241 R 'seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine'; hypothetical protein complement(3158411..3159241) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143697.1 CDS SSPA2855 NC_011147.1 3159340 3160113 D similar to Salmonella typhi CT18 membrane protein; zinc transporter ZupT 3159340..3160113 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143698.1 CDS SSPA2856 NC_011147.1 3160636 3162432 D similar to Salmonella typhi Ty2 probable arylsulfate sulfotransferase; arylsulfate sulfotransferase 3160636..3162432 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143699.1 CDS SSPA2857 NC_011147.1 3162452 3163123 D dsbA-like protein 3162452..3163123 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143700.1 CDS SSPA2858 NC_011147.1 3163138 3163815 D disulfide oxidoreductase 3163138..3163815 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143701.1 CDS ribB NC_011147.1 3163986 3164639 R DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase complement(3163986..3164639) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143702.1 CDS SSPA2860 NC_011147.1 3165016 3165372 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3165016..3165372 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143703.1 CDS glgS NC_011147.1 3165447 3165650 R Involved in glycogen synthesis. May be involved in glycogen priming; glycogen synthesis protein GlgS complement(3165447..3165650) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143704.1 CDS SSPA2862 NC_011147.1 3165914 3166534 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3165914..3166534 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143705.1 CDS SSPA2863 NC_011147.1 3166553 3168232 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3166553..3168232 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143706.1 CDS SSPA2864 NC_011147.1 3168692 3170125 R 'catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose'; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase complement(3168692..3170125) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143707.1 CDS SSPA2865 NC_011147.1 3170173 3173016 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(3170173..3173016) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143708.1 CDS SSPA2866 NC_011147.1 3173134 3174435 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3173134..3174435) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143709.1 CDS SSPA2867 NC_011147.1 3174677 3175291 D similar to Salmonella typhi CT18 membrane protein; signal transduction protein 3174677..3175291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143710.1 CDS cca NC_011147.1 3175354 3176595 D 'catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases'; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3175354..3176595 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143711.1 CDS SSPA2869 NC_011147.1 3176700 3177521 R BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase complement(3176700..3177521) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143712.1 CDS folB NC_011147.1 3177619 3177981 R 'catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin'; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase complement(3177619..3177981) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143713.1 CDS SSPA2871 NC_011147.1 3178085 3178696 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 3178085..3178696 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143714.1 CDS SSPA2872 NC_011147.1 3178752 3179042 D hypothetical protein 3178752..3179042 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143715.1 CDS SSPA2873 NC_011147.1 3178946 3179959 R 'in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity'; DNA-binding/iron metalloprotein/AP endonuclease complement(3178946..3179959) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143716.1 CDS rpsU NC_011147.1 3180187 3180402 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3180187..3180402 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143717.1 CDS dnaG NC_011147.1 3180638 3182383 D synthesizes RNA primers at the replication forks; DNA primase 3180638..3182383 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143718.1 CDS SSPA2876 NC_011147.1 3182398 3184380 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3182398..3184380 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143719.1 CDS SSPA2877 NC_011147.1 3184504 3185010 R similar to Salmonella typhi CT18 G/U mismatch-specific DNA glycosylase; G/U mismatch-specific DNA glycosylase complement(3184504..3185010) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143720.1 CDS SSPA2878 NC_011147.1 3185291 3186058 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3185291..3186058) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143721.1 CDS SSPA2879 NC_011147.1 3186293 3186937 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3186293..3186937 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143722.1 CDS SSPA2880 NC_011147.1 3186934 3188499 R similar to Salmonella typhi CT18 methyl-accepting chemotaxis protein II; methyl-accepting chemotaxis protein II complement(3186934..3188499) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143723.1 CDS SSPA2881 NC_011147.1 3188887 3190407 R similar to Salmonella typhi Ty2 aerotaxis receptor protein; aerotaxis receptor protein complement(3188887..3190407) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143724.2 CDS SSPA2882 NC_011147.1 3190810 3192216 D catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 3190810..3192216 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143725.1 CDS SSPA2883 NC_011147.1 3192387 3194405 D 'similar to Salmonella typhimurium 2,4-dieonyl-coa reductase'; 2,4-dieonyl-coa reductase 3192387..3194405 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143726.1 CDS SSPA2884 NC_011147.1 3194486 3195622 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3194486..3195622) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143727.1 CDS SSPA2885 NC_011147.1 3195708 3196205 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3195708..3196205 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143728.1 CDS SSPA2886 NC_011147.1 3196357 3197049 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3196357..3197049 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143729.1 CDS SSPA2887 NC_011147.1 3197101 3198135 D similar to Salmonella typhi CT18 possible oxidoreductase; oxidoreductase 3197101..3198135 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143730.1 CDS SSPA2888 NC_011147.1 3198405 3199373 D similar to Salmonella typhi CT18 possible drug efflux protein; drug efflux protein 3198405..3199373 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143731.1 CDS SSPA2889 NC_011147.1 3199628 3200872 D involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 3199628..3200872 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143732.1 CDS SSPA2890 NC_011147.1 3201322 3201984 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3201322..3201984 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143733.1 CDS SSPA2891 NC_011147.1 3201988 3202371 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3201988..3202371 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143734.1 CDS SSPA2892 NC_011147.1 3202516 3202884 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3202516..3202884 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143735.1 CDS SSPA2893 NC_011147.1 3203234 3203632 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3203234..3203632 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143736.1 CDS SSPA2894 NC_011147.1 3203629 3203928 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3203629..3203928 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143737.1 CDS SSPA2895 NC_011147.1 3204073 3204558 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3204073..3204558 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143738.1 CDS SSPA2896 NC_011147.1 3204626 3205612 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3204626..3205612 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143739.1 CDS SSPA2897 NC_011147.1 3205736 3206101 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3205736..3206101 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143740.1 CDS SSPA2898 NC_011147.1 3206140 3207036 R similar to Salmonella typhi CT18 possible LysR-family transcriptional regulator; LysR family transcriptional regulator complement(3206140..3207036) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143741.1 CDS SSPA2899 NC_011147.1 3207141 3207842 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3207141..3207842 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143742.1 CDS SSPA2900 NC_011147.1 3208135 3209445 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3208135..3209445) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143743.1 CDS SSPA2900a NC_011147.1 3209471 3210802 R Pseudogene in Paratyphi A strain ATCC9150 (SPA3108) due to SNP @nt332 introducing STOP codon after aa110.; hypothetical protein complement(3209471..3210802) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143744.1 CDS SSPA2901 NC_011147.1 3211117 3212481 R similar to Salmonella typhi CT18 L-serine dehydratase; L-serine dehydratase complement(3211117..3212481) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143745.1 CDS SSPA2904 NC_011147.1 3212551 3214845 R similar to Salmonella typhi CT18 probable formate acetyltransferase; formate acetyltransferase complement(3212551..3214845) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143746.1 CDS SSPA2905 NC_011147.1 3214879 3216087 R catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism; propionate/acetate kinase complement(3214879..3216087) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143747.1 CDS SSPA2906 NC_011147.1 3216154 3217485 R involved in the import of threonine and serine in combination with the import of a proton; threonine/serine transporter TdcC complement(3216154..3217485) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143748.1 CDS SSPA2907 NC_011147.1 3217506 3218495 R catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; threonine dehydratase complement(3217506..3218495) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143749.1 CDS SSPA2908 NC_011147.1 3218593 3219531 R regulates the tdcABCDEFG operon which is involved in amino acid degradation; DNA-binding transcriptional activator TdcA complement(3218593..3219531) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143750.1 CDS SSPA2909 NC_011147.1 3220991 3222136 R similar to Salmonella typhi CT18 conserved hypothetical protein; glycerate kinase complement(3220991..3222136) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143751.1 CDS garR NC_011147.1 3222234 3223118 R catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase complement(3222234..3223118) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143752.1 CDS SSPA2911 NC_011147.1 3223150 3223866 R cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase complement(3223150..3223866) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143753.1 CDS SSPA2912 NC_011147.1 3226258 3227205 R similar to Salmonella typhi CT18 possible carbohydrate kinase; carbohydrate kinase complement(3226258..3227205) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143754.1 CDS SSPA2913 NC_011147.1 3227216 3228049 R similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein complement(3227216..3228049) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143755.1 CDS gatY NC_011147.1 3228383 3229237 D 'catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway'; tagatose-bisphosphate aldolase 3228383..3229237 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143756.1 CDS SSPA2915 NC_011147.1 3229248 3230162 D similar to Salmonella typhi CT18 possible carbohydrate kinase; carbohydrate kinase 3229248..3230162 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143757.1 CDS SSPA2916 NC_011147.1 3230189 3231616 D 'similar to Salmonella typhi CT18 PTS system, sugar phosphotransferase enzyme IIBC component'; PTS system sugar phosphotransferase subunit IIBC 3230189..3231616 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143758.1 CDS SSPA2917 NC_011147.1 3231603 3232409 D similar to Salmonella typhi CT18 PTS-transport family phosphoryl transfer protein; PTS-transport family phosphoryl transfer protein 3231603..3232409 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143759.1 CDS SSPA2918 NC_011147.1 3232607 3233878 D similar to Salmonella typhimurium tagatose 6-phosphate kinase 1; tagatose 6-phosphate kinase 1 3232607..3233878 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143760.1 CDS SSPA2919 NC_011147.1 3233893 3234357 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system galactitol-specific transporter subunit IIA 3233893..3234357 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143761.1 CDS SSPA2920 NC_011147.1 3234388 3234672 D phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system galactitol-specific transporter subunit IIB 3234388..3234672 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143762.1 CDS SSPA2921 NC_011147.1 3234676 3236049 D 'similar to Salmonella typhi CT18 PTS system,galactitol-specific IIC component'; PTS system galactitol-specific transporter subunit IIC 3234676..3236049 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143763.1 CDS SSPA2922 NC_011147.1 3236093 3237136 D Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; galactitol-1-phosphate dehydrogenase 3236093..3237136 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143764.1 CDS SSPA2923 NC_011147.1 3237247 3238020 D similar to Salmonella typhi CT18 galactitol utilization operon repressor; galactitol utilization operon repressor 3237247..3238020 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143765.1 CDS SSPA2924 NC_011147.1 3238178 3239041 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3238178..3239041) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143766.1 CDS SSPA2925 NC_011147.1 3239105 3241156 D similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3239105..3241156 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143767.1 CDS SSPA2926 NC_011147.1 3241114 3241509 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3241114..3241509 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143768.1 CDS SSPA2927 NC_011147.1 3241531 3242121 D Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 3241531..3242121 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143769.1 CDS SSPA2928 NC_011147.1 3242131 3242706 D similar to Salmonella typhi CT18 possible lipoprotein; hypothetical protein 3242131..3242706 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143770.1 CDS SSPA2929 NC_011147.1 3242773 3243408 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3242773..3243408) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143771.1 CDS SSPA2930 NC_011147.1 3243539 3244057 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3243539..3244057 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143772.1 CDS SSPA2931 NC_011147.1 3244037 3244480 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3244037..3244480) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143773.1 CDS SSPA2932 NC_011147.1 3244518 3244835 D similar to Salmonella typhi CT18 conserved hypothetical protein; GIY-YIG nuclease superfamily protein 3244518..3244835 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143774.1 CDS SSPA2933 NC_011147.1 3244822 3245325 R similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase complement(3244822..3245325) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143775.1 CDS SSPA2934 NC_011147.1 3245319 3245843 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3245319..3245843) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143776.1 CDS SSPA2935 NC_011147.1 3246060 3247055 D similar to Salmonella typhi CT18 protease; protease 3246060..3247055 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143777.1 CDS SSPA2936 NC_011147.1 3247064 3247942 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3247064..3247942 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143778.2 CDS SSPA2937 NC_011147.1 3249217 3250461 R tryptophan transporter of high affinity; tryptophan permease complement(3249217..3250461) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143779.1 CDS SSPA2938 NC_011147.1 3250615 3252504 R participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD complement(3250615..3252504) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143780.1 CDS SSPA2939 NC_011147.1 3252683 3253567 R lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI complement(3252683..3253567) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143781.1 CDS SSPA2940 NC_011147.1 3253677 3255812 R similar to Salmonella typhi CT18 polynucleotide phosphorylase; polynucleotide phosphorylase/polyadenylase complement(3253677..3255812) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143782.1 CDS rpsO NC_011147.1 3256054 3256323 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(3256054..3256323) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143783.1 CDS truB NC_011147.1 3256474 3257418 R catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B complement(3256474..3257418) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143784.1 CDS rbfA NC_011147.1 3257418 3257819 R associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A complement(3257418..3257819) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143785.1 CDS infB NC_011147.1 3258040 3260718 R Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 complement(3258040..3260718) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143786.1 CDS nusA NC_011147.1 3260743 3262245 R 'modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination'; transcription elongation factor NusA complement(3260743..3262245) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143787.1 CDS SSPA2946 NC_011147.1 3262273 3262695 R in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein complement(3262273..3262695) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143788.2 CDS SSPA2947 NC_011147.1 3263353 3264696 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 3263353..3264696 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143789.1 CDS secG NC_011147.1 3264994 3265326 R similar to Salmonella typhi CT18 protein-export membrane protein; preprotein translocase subunit SecG complement(3264994..3265326) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143790.1 CDS glmM NC_011147.1 3265549 3266886 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(3265549..3266886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143791.1 CDS folP NC_011147.1 3266879 3267727 R 'catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate'; dihydropteroate synthase complement(3266879..3267727) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143792.1 CDS hflB NC_011147.1 3267832 3269766 R inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease complement(3267832..3269766) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143793.1 CDS rrmJ NC_011147.1 3269870 3270496 R Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J complement(3269870..3270496) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143794.1 CDS SSPA2953 NC_011147.1 3270584 3270916 D RNA binding protein found associated to pre-50S subunit of the ribosome; role in ribosome assembly; necessary for optimal growth but not cell viability; RNA-binding protein YhbY 3270584..3270916 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143795.1 CDS greA NC_011147.1 3271072 3271548 R 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus'; transcription elongation factor GreA complement(3271072..3271548) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143796.1 CDS SSPA2955 NC_011147.1 3271796 3273229 D 'penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'; D-alanyl-D-alanine carboxypeptidase 3271796..3273229 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143797.1 CDS obgE NC_011147.1 3273360 3274532 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(3273360..3274532) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143798.1 CDS SSPA2957 NC_011147.1 3274548 3275513 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3274548..3275513) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143799.1 CDS rpmA NC_011147.1 3275643 3275900 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(3275643..3275900) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143800.1 CDS rplU NC_011147.1 3275920 3276231 R similar to Salmonella typhi CT18 50S ribosomal subunit protein L21; 50S ribosomal protein L21 complement(3275920..3276231) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143801.1 CDS SSPA2960 NC_011147.1 3276489 3277460 D similar to Salmonella typhi CT18 octaprenyl-diphosphate synthase; octaprenyl diphosphate synthase 3276489..3277460 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143802.1 CDS SSPA2961 NC_011147.1 3277692 3277979 D activator of maltose metabolism genes; DNA-binding transcriptional regulator Nlp 3277692..3277979 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143803.1 CDS SSPA2962 NC_011147.1 3278037 3279296 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3278037..3279296) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143804.1 CDS SSPA2963 NC_011147.1 3279350 3279643 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3279350..3279643) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143805.1 CDS SSPA2964 NC_011147.1 3279792 3280088 R similar to Salmonella typhi CT18 possible anti-sigma factor antagonist; anti-sigma factor antagonist complement(3279792..3280088) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143806.1 CDS SSPA2965 NC_011147.1 3280088 3280723 R similar to Salmonella typhi CT18 possible exported protein; hypothetical protein complement(3280088..3280723) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143807.1 CDS SSPA2966 NC_011147.1 3280742 3281293 R similar to Salmonella typhi CT18 possible exported protein; hypothetical protein complement(3280742..3281293) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143808.1 CDS SSPA2967 NC_011147.1 3281298 3282080 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3281298..3282080) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143809.1 CDS SSPA2968 NC_011147.1 3282088 3282900 R ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein complement(3282088..3282900) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143810.1 CDS SSPA2969 NC_011147.1 3283155 3284090 D YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter 3283155..3284090 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143811.1 CDS SSPA2970 NC_011147.1 3284104 3285090 D similar to Salmonella typhi CT18 conserved hypothetical protein; D-arabinose 5-phosphate isomerase 3284104..3285090 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143812.1 CDS SSPA2971 NC_011147.1 3285111 3285677 D forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3285111..3285677 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143813.1 CDS SSPA2972 NC_011147.1 3285674 3286249 D similar to Salmonella typhi CT18 possible exported protein; hypothetical protein 3285674..3286249 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143814.2 CDS SSPA2973 NC_011147.1 3286218 3286772 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3286218..3286772 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143815.1 CDS SSPA2974 NC_011147.1 3286779 3287504 D 'similar to Salmonella typhi CT18 probable ABC transport protein, ATP-binding component'; ABC transporter ATP-binding protein 3286779..3287504 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143816.1 CDS SSPA2975 NC_011147.1 3287552 3288985 D 'sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen'; RNA polymerase factor sigma-54 3287552..3288985 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143817.1 CDS SSPA2976 NC_011147.1 3289008 3289295 D YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein 3289008..3289295 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143818.1 CDS SSPA2977 NC_011147.1 3289413 3289904 D similar to Salmonella typhi CT18 nitrogen regulatory IIA protein; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 3289413..3289904 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143819.1 CDS SSPA2978 NC_011147.1 3289950 3290804 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3289950..3290804 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143820.1 CDS SSPA2979 NC_011147.1 3290801 3291073 D similar to Salmonella typhi CT18 phosphocarrier protein (nitrogen related hpr); N-regulated PTS system phosphohistidinoprotein-hexose phosphotransferase Npr 3290801..3291073 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143821.1 CDS SSPA2980 NC_011147.1 3291318 3291950 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3291318..3291950 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143822.1 CDS mtgA NC_011147.1 3292025 3292753 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(3292025..3292753) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143823.1 CDS SSPA2982 NC_011147.1 3292750 3293403 R similar to Salmonella typhi CT18 conserved hypothetical protein; isoprenoid biosynthesis protein complement(3292750..3293403) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143824.1 CDS SSPA2983 NC_011147.1 3293630 3295966 R sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB complement(3293630..3295966) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143825.1 CDS SSPA2984 NC_011147.1 3296060 3296989 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3296060..3296989) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143826.1 CDS gltB NC_011147.1 3297660 3302120 D catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 3297660..3302120 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143827.1 CDS gltD NC_011147.1 3302130 3303548 D 'glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate'; glutamate synthase subunit beta 3302130..3303548 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143828.1 CDS SSPA2987 NC_011147.1 3303756 3304859 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3303756..3304859 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143829.1 CDS codB NC_011147.1 3304976 3306229 D similar to Salmonella typhi CT18 cytosine permease; cytosine permease 3304976..3306229 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143830.1 CDS SSPA2989 NC_011147.1 3306216 3307496 D Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 3306216..3307496 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143831.1 CDS SSPA2990 NC_011147.1 3307578 3308045 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3307578..3308045) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143832.1 CDS SSPA2991 NC_011147.1 3308042 3308917 R catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase complement(3308042..3308917) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143833.1 CDS SSPA2992 NC_011147.1 3308914 3309603 R Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase complement(3308914..3309603) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143834.1 CDS SSPA2993 NC_011147.1 3309650 3311140 R similar to Salmonella typhi CT18 sialic acid transporter; sialic acid transporter complement(3309650..3311140) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143835.1 CDS SSPA2994 NC_011147.1 3311256 3312149 R catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase complement(3311256..3312149) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143836.1 CDS SSPA2995 NC_011147.1 3312284 3313075 R Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR complement(3312284..3313075) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143837.1 CDS SSPA2996 NC_011147.1 3313184 3313684 R similar to Salmonella typhi CT18 stringent starvation protein B; ClpXP protease specificity-enhancing factor complement(3313184..3313684) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143838.1 CDS sspA NC_011147.1 3313690 3314328 R transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A complement(3313690..3314328) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143839.1 CDS rpsI NC_011147.1 3314641 3315033 R forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 complement(3314641..3315033) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143840.1 CDS rplM NC_011147.1 3315049 3315477 R in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 complement(3315049..3315477) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143841.1 CDS SSPA3000 NC_011147.1 3315778 3316902 R similar to Salmonella typhi CT18 ATP/GTP-binding protein; ATP/GTP-binding protein complement(3315778..3316902) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143842.1 CDS SSPA3001 NC_011147.1 3317089 3317493 D similar to Salmonella typhi CT18 conserved hypothetical protein; cytochrome d ubiquinol oxidase subunit III 3317089..3317493 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143843.1 CDS SSPA3002 NC_011147.1 3317650 3319017 D similar to Salmonella typhi CT18 serine protease; serine endoprotease 3317650..3319017 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143844.1 CDS SSPA3003 NC_011147.1 3319110 3320180 D similar to Salmonella typhi CT18 serine protease; serine endoprotease 3319110..3320180 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143845.1 CDS SSPA3004 NC_011147.1 3320214 3320945 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(3320214..3320945) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143846.1 CDS SSPA3005 NC_011147.1 3320965 3322248 R similar to Salmonella typhi CT18 oxaloacetate decarboxylase beta chain; oxaloacetate decarboxylase subunit beta complement(3320965..3322248) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143847.1 CDS SSPA3006 NC_011147.1 3322261 3324027 R catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase complement(3322261..3324027) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143848.1 CDS oadG NC_011147.1 3324043 3324285 R catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide; oxaloacetate decarboxylase subunit gamma complement(3324043..3324285) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143849.1 CDS SSPA3008 NC_011147.1 3324441 3325058 R Involved in the tartrate degradation pathway; L(+)-tartrate dehydratase subunit beta complement(3324441..3325058) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143850.1 CDS SSPA3009 NC_011147.1 3325058 3325957 R Involved in the tartrate degradation pathway; tartrate dehydratase subunit alpha complement(3325058..3325957) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143851.2 CDS SSPA3010 NC_011147.1 3327469 3328134 R similar to Salmonella typhi CT18 possible transcriptional regulator; transcriptional regulator complement(3327469..3328134) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143852.1 CDS SSPA3011 NC_011147.1 3328121 3328750 R similar to Salmonella typhi CT18 possible GntR-family transcriptional regulator; GntR family transcriptional regulator complement(3328121..3328750) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143853.1 CDS SSPA3012 NC_011147.1 3328870 3329808 R oxidizes malate to oxaloacetate; malate dehydrogenase complement(3328870..3329808) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143854.1 CDS SSPA3013 NC_011147.1 3330222 3330692 D regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 3330222..3330692 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143855.1 CDS SSPA3014 NC_011147.1 3331057 3331320 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3331057..3331320 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143856.1 CDS SSPA3015 NC_011147.1 3331424 3331690 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3331424..3331690 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143857.1 CDS SSPA3016 NC_011147.1 3331750 3332022 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3331750..3332022) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143858.1 CDS SSPA3017 NC_011147.1 3332194 3334161 R with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB complement(3332194..3334161) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143859.1 CDS SSPA3018 NC_011147.1 3334167 3335099 R 'with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate'; p-hydroxybenzoic acid efflux subunit AaeA complement(3334167..3335099) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143860.1 CDS SSPA3019 NC_011147.1 3335107 3335310 R membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein complement(3335107..3335310) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143861.1 CDS SSPA3020 NC_011147.1 3335492 3336421 D similar to Salmonella typhi CT18 probable LysR-family transcriptional regulator; DNA-binding transcriptional regulator 3335492..3336421 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143862.1 CDS tldD NC_011147.1 3336544 3337989 R 'responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA'; protease TldD complement(3336544..3337989) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143863.2 CDS SSPA3022 NC_011147.1 3338134 3341934 R similar to Salmonella typhi CT18 possible exported protein; hypothetical protein complement(3338134..3341934) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143864.1 CDS SSPA3023 NC_011147.1 3342045 3343514 R involved in the processing of the 5'end of 16S rRNA; ribonuclease G complement(3342045..3343514) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143865.1 CDS SSPA3024 NC_011147.1 3343504 3344097 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(3343504..3344097) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143866.1 CDS SSPA3025 NC_011147.1 3344106 3344597 R part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD complement(3344106..3344597) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143867.1 CDS SSPA3026 NC_011147.1 3344597 3345649 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3344597..3345649) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143868.1 CDS SSPA3027 NC_011147.1 3345714 3346757 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3345714..3346757) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143869.1 CDS SSPA3028 NC_011147.1 3347065 3349005 R regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD complement(3347065..3349005) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143870.1 CDS SSPA3029 NC_011147.1 3349209 3350183 D similar to Salmonella typhi CT18 possible oxidoreductase; oxidoreductase 3349209..3350183 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143871.1 CDS SSPA3030 NC_011147.1 3350296 3351300 D in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 3350296..3351300 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143872.1 CDS SSPA3031 NC_011147.1 3351301 3351900 D in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 3351301..3351900 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143873.1 CDS SSPA3032 NC_011147.1 3352293 3352763 D 'composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism'; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 3352293..3352763 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143874.1 CDS SSPA3033 NC_011147.1 3352774 3354123 D 'an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism'; acetyl-CoA carboxylase biotin carboxylase subunit 3352774..3354123 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143875.1 CDS SSPA3034 NC_011147.1 3354232 3354474 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3354232..3354474 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143876.1 CDS panF NC_011147.1 3354464 3355915 D mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 3354464..3355915 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143877.1 CDS prmA NC_011147.1 3355927 3356808 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 3355927..3356808 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143878.2 CDS SSPA3037 NC_011147.1 3357468 3358433 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3357468..3358433 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143879.1 CDS fis NC_011147.1 3358459 3358755 D Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 3358459..3358755 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143880.1 CDS SSPA3039 NC_011147.1 3359780 3359971 D similar to Salmonella typhimurium periplasmic protein; hypothetical protein 3359780..3359971 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143881.1 CDS SSPA3040 NC_011147.1 3360122 3362221 D similar to Salmonella typhimurium membrane domain involved in signal transduction; Diguanylate cyclase/phosphodiesterase domain 1; Diguanylate cyclase/phosphodiesterase domain 2; hypothetical protein 3360122..3362221 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143882.1 CDS SSPA3041 NC_011147.1 3362224 3362886 R similar to Salmonella typhimurium transcriptional repressor for envCD (acrEF) (TetR/AcrR family); DNA-binding transcriptional regulator EnvR complement(3362224..3362886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143883.1 CDS SSPA3042 NC_011147.1 3363300 3364457 D similar to Salmonella typhimurium transmembrane protein affecting septum formation and cell membrane permeability; septum formation/cell membrane permeability transmembrane protein 3363300..3364457 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143884.1 CDS SSPA3043 NC_011147.1 3364469 3367582 D 'similar to Salmonella typhimurium RND family,multidrug transport protein, acriflavin resistance protein F'; acriflavin resistance protein F 3364469..3367582 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143885.1 CDS SSPA3044 NC_011147.1 3367819 3368040 D similar to Salmonella typhi CT18 possible lipoprotein; lipoprotein 3367819..3368040 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143886.1 CDS SSPA3045 NC_011147.1 3374545 3375099 D similar to Salmonella typhi CT18 transferase; transferase 3374545..3375099 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143887.1 CDS SSPA3046 NC_011147.1 3375075 3375332 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3375075..3375332) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143888.1 CDS aroE NC_011147.1 3375329 3376147 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(3375329..3376147) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143889.1 CDS SSPA3048 NC_011147.1 3376152 3376724 R RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA; ribosome maturation factor complement(3376152..3376724) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143890.1 CDS SSPA3049 NC_011147.1 3376729 3377271 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3376729..3377271) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143891.1 CDS SSPA3050 NC_011147.1 3377298 3377771 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3377298..3377771) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143892.1 CDS SSPA3051 NC_011147.1 3377743 3378867 R similar to Salmonella typhi CT18 conserved hypothetical protein; DNA protecting protein DprA complement(3377743..3378867) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143893.1 CDS def NC_011147.1 3378999 3379508 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 3378999..3379508 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143894.1 CDS fmt NC_011147.1 3379524 3380471 D modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 3379524..3380471 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143895.1 CDS SSPA3054 NC_011147.1 3380523 3381812 D catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase B 3380523..3381812 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143896.1 CDS trkA NC_011147.1 3381834 3383210 D involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 3381834..3383210 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143897.1 CDS mscL NC_011147.1 3383352 3383765 D forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large conductance mechanosensitive channel protein 3383352..3383765 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143898.1 CDS zntR NC_011147.1 3384028 3384453 R mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator complement(3384028..3384453) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143899.1 CDS SSPA3058 NC_011147.1 3384464 3384832 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3384464..3384832) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143900.1 CDS rplQ NC_011147.1 3384940 3385323 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3384940..3385323) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143901.1 CDS SSPA3060 NC_011147.1 3385364 3386353 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3385364..3386353) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143902.1 CDS rpsD NC_011147.1 3386379 3386999 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3386379..3386999) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143903.1 CDS SSPA3062 NC_011147.1 3387033 3387365 R similar to Salmonella typhi CT18 30S ribosomal subunit protein S11; 30S ribosomal protein S11 complement(3387033..3387365) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143904.1 CDS rpsM NC_011147.1 3387439 3387795 R 'located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA'; 30S ribosomal protein S13 complement(3387439..3387795) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143905.1 CDS rpmJ NC_011147.1 3387942 3388058 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3387942..3388058) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143906.1 CDS secY NC_011147.1 3388090 3389421 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3388090..3389421) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143907.1 CDS rplO NC_011147.1 3389429 3389863 R late assembly protein; 50S ribosomal protein L15 complement(3389429..3389863) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143908.1 CDS rpmD NC_011147.1 3389867 3390046 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3389867..3390046) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143909.1 CDS rpsE NC_011147.1 3390050 3390553 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3390050..3390553) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143910.1 CDS rplR NC_011147.1 3390568 3390921 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3390568..3390921) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143911.1 CDS rplF NC_011147.1 3390931 3391464 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3390931..3391464) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143912.1 CDS rpsH NC_011147.1 3391477 3391869 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3391477..3391869) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143913.1 CDS rpsN NC_011147.1 3391903 3392208 R 'located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif'; 30S ribosomal protein S14 complement(3391903..3392208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143914.1 CDS rplE NC_011147.1 3392223 3392762 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3392223..3392762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143915.1 CDS rplX NC_011147.1 3392777 3393091 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3392777..3393091) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143916.1 CDS rplN NC_011147.1 3393102 3393473 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3393102..3393473) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143917.1 CDS rpsQ NC_011147.1 3393637 3393891 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3393637..3393891) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143918.1 CDS SSPA3077 NC_011147.1 3393891 3394082 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3393891..3394082) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143919.1 CDS rplP NC_011147.1 3394082 3394492 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3394082..3394492) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143920.1 CDS rpsC NC_011147.1 3394505 3395206 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3394505..3395206) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143921.1 CDS rplV NC_011147.1 3395224 3395556 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3395224..3395556) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143922.1 CDS rpsS NC_011147.1 3395571 3395849 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3395571..3395849) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143923.1 CDS rplB NC_011147.1 3395866 3396687 R 'one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation'; 50S ribosomal protein L2 complement(3395866..3396687) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143924.1 CDS rplW NC_011147.1 3396705 3397007 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3396705..3397007) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143925.1 CDS rplD NC_011147.1 3397004 3397609 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3397004..3397609) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143926.1 CDS rplC NC_011147.1 3397620 3398249 R 'binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin'; 50S ribosomal protein L3 complement(3397620..3398249) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143927.1 CDS SSPA3086 NC_011147.1 3398282 3398593 R similar to Salmonella typhi CT18 30S ribosomal subunit protein S10; 30S ribosomal protein S10 complement(3398282..3398593) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143928.1 CDS SSPA3087 NC_011147.1 3398973 3399440 D similar to Salmonella typhi CT18 Type III leader peptidase; type III leader peptidase 3398973..3399440 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143929.1 CDS SSPA3088 NC_011147.1 3399437 3399913 R iron storage protein; bacterioferritin complement(3399437..3399913) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143930.1 CDS SSPA3089 NC_011147.1 3399986 3400180 R similar to Salmonella typhi Ty2 bacterioferritin-associated ferredoxin; bacterioferritin-associated ferredoxin complement(3399986..3400180) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143931.1 CDS tufA NC_011147.1 3400365 3401549 R 'EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu'; elongation factor Tu complement(3400365..3401549) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143932.1 CDS SSPA3091 NC_011147.1 3401621 3403735 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3401621..3403735) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143933.1 CDS SSPA3092 NC_011147.1 3403832 3404302 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3403832..3404302) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143934.1 CDS rpsL NC_011147.1 3404398 3404772 R 'interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance'; 30S ribosomal protein S12 complement(3404398..3404772) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143935.1 CDS SSPA3094 NC_011147.1 3404898 3405185 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusB complement(3404898..3405185) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143936.1 CDS SSPA3095 NC_011147.1 3405193 3405549 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC complement(3405193..3405549) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143937.1 CDS SSPA3096 NC_011147.1 3405549 3405935 R in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD complement(3405549..3405935) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143938.1 CDS SSPA3097 NC_011147.1 3405935 3406657 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3405935..3406657) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143939.1 CDS SSPA3098 NC_011147.1 3406934 3407752 R rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(3406934..3407752) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143940.1 CDS SSPA3099 NC_011147.1 3407987 3408190 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3407987..3408190 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143941.1 CDS SSPA3100 NC_011147.1 3408380 3408970 R rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase complement(3408380..3408970) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143942.1 CDS SSPA3101 NC_011147.1 3409065 3409265 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3409065..3409265) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143943.1 CDS SSPA3102 NC_011147.1 3409276 3411081 R involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB complement(3409276..3411081) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143944.1 CDS SSPA3103 NC_011147.1 3411081 3411632 R required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG complement(3411081..3411632) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143945.1 CDS SSPA3104 NC_011147.1 3411898 3413805 D similar to Salmonella typhi CT18 probable ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 3411898..3413805 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143946.1 CDS SSPA3105 NC_011147.1 3414191 3414502 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3414191..3414502) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143947.1 CDS SSPA3106 NC_011147.1 3414691 3415767 D similar to Salmonella typhimurium hydrolase. Alpha/beta-hydrolase fold; hydrolase 3414691..3415767 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143948.1 CDS SSPA3107 NC_011147.1 3415764 3415982 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3415764..3415982 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143949.1 CDS SSPA3108 NC_011147.1 3416034 3416903 D similar to Salmonella typhi CT18 phosphoribulokinase; phosphoribulokinase 3416034..3416903 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143950.1 CDS SSPA3109 NC_011147.1 3416999 3417403 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3416999..3417403) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143951.1 CDS SSPA3110 NC_011147.1 3417711 3418343 D complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 3417711..3418343 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143952.1 CDS SSPA3111 NC_011147.1 3418392 3420479 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3418392..3420479 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143953.1 CDS argD NC_011147.1 3420522 3421739 R 'DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate'; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase complement(3420522..3421739) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143954.1 CDS SSPA3113 NC_011147.1 3421825 3422388 R aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II complement(3421825..3422388) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143955.1 CDS SSPA3114 NC_011147.1 3422420 3423022 R similar to Salmonella typhi CT18 cell filamentation protein Fic; cell filamentation protein Fic complement(3422420..3423022) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143956.1 CDS SSPA3115 NC_011147.1 3423012 3423179 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3423012..3423179) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143957.1 CDS SSPA3116 NC_011147.1 3423288 3423860 R similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl cis-trans isomerase A complement(3423288..3423860) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143958.1 CDS SSPA3117 NC_011147.1 3424137 3425318 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3424137..3425318 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143959.1 CDS SSPA3118 NC_011147.1 3425580 3428123 D similar to Salmonella typhi CT18 nitrite reductase large subunit; nitrite reductase large subunit 3425580..3428123 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143960.1 CDS nirD NC_011147.1 3428120 3428446 D 'involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations'; nitrite reductase small subunit 3428120..3428446 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143961.1 CDS SSPA3120 NC_011147.1 3428642 3429451 D member of the FNT family of formate and nitrite transporters; nitrite transporter NirC 3428642..3429451 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143962.1 CDS cysG NC_011147.1 3429463 3430836 D 'multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin'; siroheme synthase 3429463..3430836 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143963.1 CDS bigA NC_011147.1 3431163 3437129 D 'Contains C-terminal autotransporter domain. N-terminal domain conserved in Typhimurium LT2 sequence,but central domains differ extensively. Part of central domain has high homology with E. coli gene EntS/YbdA (P336666). Typhi ortholog has frameshift mutation resulting in inactivation of autotransporter domain,however sequence appears to be intact in Paratyphi A.'; surface-exposed virulence protein 3431163..3437129 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143964.1 CDS SSPA3122 NC_011147.1 3437637 3438641 R 'catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; tryptophanyl-tRNA synthetase complement(3437637..3438641) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143965.1 CDS SSPA3123 NC_011147.1 3438634 3439392 R catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase complement(3438634..3439392) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143966.1 CDS SSPA3124 NC_011147.1 3439385 3440062 R catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase complement(3439385..3440062) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143967.1 CDS SSPA3125 NC_011147.1 3440080 3440916 R similar to Salmonella typhi CT18 DNA adenine methylase; DNA adenine methylase complement(3440080..3440916) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143968.1 CDS SSPA3126 NC_011147.1 3441097 3442371 R similar to Salmonella typhi CT18 DamX protein; hypothetical protein complement(3441097..3442371) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143969.1 CDS aroB NC_011147.1 3442469 3443557 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3442469..3443557) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143970.1 CDS aroK NC_011147.1 3443614 3444135 R type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I complement(3443614..3444135) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143971.1 CDS hofQ NC_011147.1 3444600 3445838 R outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; outer membrane porin HofQ complement(3444600..3445838) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143972.1 CDS SSPA3130 NC_011147.1 3445753 3446154 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3445753..3446154) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143973.1 CDS SSPA3131 NC_011147.1 3446144 3446617 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3446144..3446617) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143974.1 CDS SSPA3132 NC_011147.1 3446601 3447140 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3446601..3447140) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143975.1 CDS mrcA NC_011147.1 3448015 3450591 D bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 3448015..3450591 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143976.1 CDS nudE NC_011147.1 3450687 3451283 R ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE complement(3450687..3451283) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143977.1 CDS SSPA3135 NC_011147.1 3451573 3453705 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3451573..3453705 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143978.1 CDS SSPA3136 NC_011147.1 3453728 3454438 D similar to Salmonella typhi CT18 hydrolase; hydrolase 3453728..3454438 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143979.1 CDS SSPA3137 NC_011147.1 3454449 3454850 D similar to Salmonella typhi Ty2 heat shock protein; ribosome-associated heat shock protein Hsp15 3454449..3454850 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143980.1 CDS hslO NC_011147.1 3454875 3455753 D 'becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers'; Hsp33-like chaperonin 3454875..3455753 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143981.1 CDS SSPA3139 NC_011147.1 3455864 3457573 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3455864..3457573) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143982.1 CDS SSPA3140 NC_011147.1 3457953 3459572 D PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 3457953..3459572 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143983.2 CDS envZ NC_011147.1 3459647 3460999 R membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein complement(3459647..3460999) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143984.1 CDS ompR NC_011147.1 3460996 3461715 R part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator complement(3460996..3461715) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143985.1 CDS greB NC_011147.1 3461941 3462414 D 'necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus'; transcription elongation factor GreB 3461941..3462414 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143986.1 CDS SSPA3144 NC_011147.1 3462513 3464843 D similar to Salmonella typhi CT18 transcription accessory protein; transcription accessory protein 3462513..3464843 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143987.1 CDS feoA NC_011147.1 3465280 3465507 D similar to Salmonella typhi CT18 ferrous iron transport protein; ferrous iron transport protein A 3465280..3465507 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143988.1 CDS feoB NC_011147.1 3465526 3467844 D cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; ferrous iron transport protein B 3465526..3467844 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143989.1 CDS SSPA3147 NC_011147.1 3467857 3468093 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3467857..3468093 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143990.1 CDS SSPA3148 NC_011147.1 3468328 3469254 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3468328..3469254 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143991.1 CDS SSPA3149 NC_011147.1 3469290 3470060 R Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis; carboxylesterase BioH complement(3469290..3470060) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143992.1 CDS SSPA3150 NC_011147.1 3470098 3470781 D involved in high-affinity gluconate transport; gluconate periplasmic binding protein 3470098..3470781 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143993.1 CDS SSPA3151 NC_011147.1 3470840 3471415 D cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 3470840..3471415 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143994.1 CDS SSPA3152 NC_011147.1 3471840 3473108 D similar to Salmonella typhi CT18 high-affinity gluconate transporter; high-affinity gluconate transporter 3471840..3473108 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143995.1 CDS malQ NC_011147.1 3473227 3475305 R amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase complement(3473227..3475305) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143996.1 CDS SSPA3154 NC_011147.1 3475315 3477708 R similar to Salmonella typhi CT18 maltodextrin phosphorylase; maltodextrin phosphorylase complement(3475315..3477708) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143997.1 CDS SSPA3155 NC_011147.1 3478302 3481007 D Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 3478302..3481007 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143998.1 CDS SSPA3156 NC_011147.1 3481081 3481839 R 'represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism'; DNA-binding transcriptional repressor GlpR complement(3481081..3481839) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002143999.1 CDS SSPA3157 NC_011147.1 3481932 3482762 R protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG complement(3481932..3482762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144000.1 CDS glpE NC_011147.1 3482838 3483164 R belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; thiosulfate sulfurtransferase complement(3482838..3483164) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144001.1 CDS glpD NC_011147.1 3483363 3484871 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3483363..3484871 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144002.1 CDS SSPA3160 NC_011147.1 3484963 3487410 R similar to Salmonella typhi CT18 glycogen phosphorylase; glycogen phosphorylase complement(3484963..3487410) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144003.1 CDS glgA NC_011147.1 3487430 3488863 R 'catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose'; glycogen synthase complement(3487430..3488863) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144004.1 CDS glgC NC_011147.1 3488863 3490158 R catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase complement(3488863..3490158) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144005.1 CDS SSPA3163 NC_011147.1 3490173 3492149 R 'catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen'; glycogen debranching protein complement(3490173..3492149) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144006.1 CDS SSPA3164 NC_011147.1 3492146 3494332 R 'catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain'; glycogen branching protein complement(3492146..3494332) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144007.1 CDS SSPA3165 NC_011147.1 3494710 3495816 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(3494710..3495816) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144008.1 CDS SSPA3166 NC_011147.1 3496256 3496714 R similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase complement(3496256..3496714) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144009.1 CDS SSPA3167 NC_011147.1 3496954 3498294 R similar to Salmonella typhi CT18 low-affinity gluconate transporter; low affinity gluconate transporter complement(3496954..3498294) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144010.1 CDS gntK NC_011147.1 3498291 3498824 R thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; gluconate kinase complement(3498291..3498824) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144011.1 CDS SSPA3169 NC_011147.1 3498963 3499958 R similar to Salmonella typhi CT18 gluconate utilization operon repressor; gluconate utilization operon repressor complement(3498963..3499958) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144012.1 CDS SSPA3170 NC_011147.1 3500088 3500783 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3500088..3500783) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144013.1 CDS SSPA3171 NC_011147.1 3502412 3502900 D YhhY; regulated by the fur regulator; unknown function; acetyltransferase YhhY 3502412..3502900 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144014.1 CDS SSPA3172 NC_011147.1 3503165 3504379 D similar to Salmonella typhi CT18 ribokinase; ribokinase 3503165..3504379 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144015.1 CDS SSPA3173 NC_011147.1 3504395 3505156 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3504395..3505156 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144016.1 CDS SSPA3174 NC_011147.1 3505210 3506181 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3505210..3506181 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144017.1 CDS SSPA3175 NC_011147.1 3506178 3507212 D similar to Salmonella typhi CT18 puative phophotriesterase; phophotriesterase 3506178..3507212 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144018.1 CDS ggt NC_011147.1 3507257 3508999 R periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides; gamma-glutamyltranspeptidase complement(3507257..3508999) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144019.1 CDS SSPA3177 NC_011147.1 3509125 3509541 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3509125..3509541 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144020.1 CDS ugpQ NC_011147.1 3509538 3510278 R hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase complement(3509538..3510278) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144021.1 CDS ugpC NC_011147.1 3510275 3511345 R part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit complement(3510275..3511345) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144022.1 CDS SSPA3180 NC_011147.1 3511348 3512193 R with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein complement(3511348..3512193) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144023.1 CDS SSPA3181 NC_011147.1 3512190 3513077 R with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease complement(3512190..3513077) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144024.1 CDS SSPA3182 NC_011147.1 3513182 3514498 R with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic binding protein complement(3513182..3514498) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144025.1 CDS SSPA3183 NC_011147.1 3514731 3515009 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(3514731..3515009) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144026.1 CDS livF NC_011147.1 3515173 3515886 R 'with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine'; leucine/isoleucine/valine transporter ATP-binding subunit complement(3515173..3515886) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144027.1 CDS livG NC_011147.1 3515888 3516655 R 'Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine'; leucine/isoleucine/valine transporter ATP-binding subunit complement(3515888..3516655) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144028.1 CDS livM NC_011147.1 3516652 3517917 R 'Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine'; leucine/isoleucine/valine transporter permease subunit complement(3516652..3517917) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144029.1 CDS SSPA3187 NC_011147.1 3517914 3518840 R LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease LivH complement(3517914..3518840) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144030.1 CDS SSPA3188 NC_011147.1 3518900 3520009 R similar to Salmonella typhi CT18 leucine-specific binding protein; leucine-specific binding protein complement(3518900..3520009) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144031.1 CDS yhhK NC_011147.1 3520430 3520813 D hypothetical protein 3520430..3520813 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144032.1 CDS SSPA3189 NC_011147.1 3521007 3522110 R 'similar to Salmonella typhimurium ABC superfamily (bind_prot), branched-chain amino acid transporter,high-affinity'; branched-chain amino acid ABC transporter binding protein complement(3521007..3522110) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144033.1 CDS SSPA3190 NC_011147.1 3522432 3523286 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(3522432..3523286) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144034.1 CDS ftsX NC_011147.1 3523532 3524587 R 'ABC transporter, membrane protein'; cell division protein FtsX complement(3523532..3524587) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144035.1 CDS SSPA3192 NC_011147.1 3524580 3525248 R 'ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions'; cell division protein FtsE complement(3524580..3525248) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144036.1 CDS SSPA3193 NC_011147.1 3525251 3526726 R signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; cell division protein FtsY complement(3525251..3526726) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144037.1 CDS rsmD NC_011147.1 3526852 3527448 D catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 3526852..3527448 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144038.1 CDS SSPA3195 NC_011147.1 3527435 3527707 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3527435..3527707 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144039.1 CDS SSPA3196 NC_011147.1 3527729 3528100 R hypothetical protein complement(3527729..3528100) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144040.1 CDS SSPA3197 NC_011147.1 3528242 3528868 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3528242..3528868 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144041.1 CDS zntA NC_011147.1 3528949 3531147 D 'P-type ATPase involved in the export of lead, cadmium, zinc and mercury'; zinc/cadmium/mercury/lead-transporting ATPase 3528949..3531147 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144042.1 CDS SSPA3199 NC_011147.1 3531344 3532987 D similar to Salmonella typhi CT18 methyl-accepting chemotaxis citrate transducer; methyl-accepting chemotaxis citrate transducer 3531344..3532987 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144043.1 CDS SSPA3200 NC_011147.1 3533011 3533256 R TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA complement(3533011..3533256) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144044.1 CDS SSPA3201 NC_011147.1 3533426 3534091 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3533426..3534091 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144045.1 CDS SSPA3204 NC_011147.1 3534726 3535943 R similar to Salmonella typhi CT18 membrane protein; major facilitator superfamily transporter complement(3534726..3535943) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144046.1 CDS SSPA3205 NC_011147.1 3536075 3537124 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3536075..3537124 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144047.1 CDS SSPA3206 NC_011147.1 3537176 3537754 D similar to Salmonella typhi CT18 conserved hypothetical protein; holo-(acyl carrier protein) synthase 2 3537176..3537754 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144048.1 CDS SSPA3207 NC_011147.1 3537846 3538247 D Inhibits transcription at high concentrations of nickel; nickel responsive regulator 3537846..3538247 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144049.1 CDS SSPA3208 NC_011147.1 3538349 3539473 R similar to Salmonella typhimurium ABC superfamily (atp_bind/membrane) transport protein; ABC transporter protein ATP-binding/membrane protein complement(3538349..3539473) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144050.1 CDS SSPA3209 NC_011147.1 3539473 3542214 R similar to Salmonella typhi CT18 hypothetical ABC transporter ATP-binding protein; hypothetical protein complement(3539473..3542214) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144051.1 CDS SSPA3210 NC_011147.1 3542211 3543269 R similar to Salmonella typhi Ty2 HlyD-family secretion protein; HlyD-family secretion protein complement(3542211..3543269) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144052.1 CDS SSPA3211 NC_011147.1 3544056 3545348 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3544056..3545348 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144053.1 CDS SSPA3212 NC_011147.1 3545364 3546530 D similar to Salmonella typhi CT18 aminotransferase; aminotransferase 3545364..3546530 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144054.1 CDS SSPA3213 NC_011147.1 3546540 3546920 D similar to Salmonella typhi CT18 regulatory protein; regulatory protein 3546540..3546920 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144055.1 CDS SSPA3214 NC_011147.1 3546959 3547606 D similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 3546959..3547606 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144056.1 CDS SSPA3215 NC_011147.1 3547661 3548902 D similar to |18309404|ref|NP_561338.1| conserved hypothetical protein [Clostridium perfringens str. 13]; hypothetical protein 3547661..3548902 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144057.1 CDS SSPA3216 NC_011147.1 3549188 3549304 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3549188..3549304) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144058.1 CDS SSPA3217 NC_011147.1 3549404 3550606 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(3549404..3550606) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144059.2 CDS SSPA3218 NC_011147.1 3550837 3552333 D similar to Salmonella typhi CT18 low-affinity inorganic phosphate transporter; low-affinity inorganic phosphate transporter 3550837..3552333 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144060.1 CDS SSPA3219 NC_011147.1 3552473 3552808 R 'ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress'; universal stress protein UspB complement(3552473..3552808) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144061.1 CDS SSPA3220 NC_011147.1 3553196 3553630 D similar to Salmonella typhi CT18 universal stress protein A; universal stress protein A 3553196..3553630 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144062.1 CDS SSPA3221 NC_011147.1 3553960 3555432 D member of the POT family of peptide transporters; probable proton-dependent peptide transporter function; inner membrane transporter YhiP 3553960..3555432 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144063.1 CDS SSPA3222 NC_011147.1 3555524 3556282 R predicted SAM-dependent methyltransferase; methyltransferase complement(3555524..3556282) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144064.1 CDS SSPA3223 NC_011147.1 3556289 3558331 R similar to Salmonella typhi CT18 oligopeptidase A; oligopeptidase A complement(3556289..3558331) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144065.1 CDS SSPA3224 NC_011147.1 3558494 3559147 R similar to Salmonella typhi CT18 lipoprotein; hypothetical protein complement(3558494..3559147) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144066.1 CDS SSPA3225 NC_011147.1 3559377 3559868 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3559377..3559868 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144067.1 CDS SSPA3226 NC_011147.1 3559989 3560831 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3559989..3560831 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144068.1 CDS SSPA3227 NC_011147.1 3560936 3562288 D catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 3560936..3562288 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144069.1 CDS SSPA3230 NC_011147.1 3563628 3564347 R similar to Salmonella typhi CT18 gntR family regulatory protein; gntR family regulatory protein complement(3563628..3564347) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144070.1 CDS treF NC_011147.1 3564673 3566322 D cytoplasmic; catalyzes the hydrolysis of trehalose to glucose; trehalase 3564673..3566322 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144071.1 CDS SSPA3232 NC_011147.1 3566335 3567924 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3566335..3567924) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144072.1 CDS SSPA3233 NC_011147.1 3568205 3568561 D similar to Salmonella typhi CT18 phage-like lysozyme; phage-like lysozyme 3568205..3568561 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144073.1 CDS SSPA3234 NC_011147.1 3568567 3569169 R similar to Salmonella typhi CT18 hypothetical luxR-family transcriptional regulator; hypothetical protein complement(3568567..3569169) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144074.1 CDS SSPA3235 NC_011147.1 3570773 3571801 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3570773..3571801 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144075.1 CDS SSPA3236 NC_011147.1 3572152 3573474 D similar to Salmonella typhi CT18 hypothetical metabolite transport protein; hypothetical protein 3572152..3573474 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144076.1 CDS SSPA3237 NC_011147.1 3575682 3576449 R in Escherichia coli this protein is involved in flagellar function; EAL domain-containing protein complement(3575682..3576449) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144077.1 CDS SSPA3238 NC_011147.1 3576678 3577607 D similar to Salmonella typhi CT18 2-dehydro-3-deoxygluconokinase; 2-dehydro-3-deoxygluconokinase 3576678..3577607 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144078.1 CDS SSPA3239 NC_011147.1 3577661 3579148 R similar to Salmonella typhi CT18 zinc-protease precursor; zinc-protease complement(3577661..3579148) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144079.1 CDS SSPA3240 NC_011147.1 3579347 3580654 R involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA complement(3579347..3580654) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144080.2 CDS SSPA3241 NC_011147.1 3580812 3582818 R HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a phosphodiesterase protein from E. coli; phosphodiesterase complement(3580812..3582818) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144081.2 CDS SSPA3242 NC_011147.1 3582992 3586534 R 'cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA'; cellulose synthase subunit BcsC complement(3582992..3586534) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144082.1 CDS SSPA3243 NC_011147.1 3586516 3587625 R 'catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans'; endo-1,4-D-glucanase complement(3586516..3587625) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144083.1 CDS SSPA3244 NC_011147.1 3587629 3589929 R 'binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)'; cellulose synthase regulator protein complement(3587629..3589929) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144084.1 CDS SSPA3245 NC_011147.1 3592561 3593313 R similar to Salmonella typhi CT18 conserved hypothetical protein; cell division protein complement(3592561..3593313) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144085.1 CDS SSPA3246 NC_011147.1 3593314 3593517 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3593314..3593517) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144086.1 CDS SSPA3247 NC_011147.1 3593762 3595333 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3593762..3595333 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144087.1 CDS SSPA3248 NC_011147.1 3595330 3595521 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3595330..3595521 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144088.1 CDS SSPA3249 NC_011147.1 3595518 3597197 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3595518..3597197 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144089.1 CDS SSPA3250 NC_011147.1 3597279 3597410 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3597279..3597410) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144090.1 CDS SSPA3251 NC_011147.1 3598018 3599316 D similar to Salmonella typhi CT18 amino acid permease; amino acid permease 3598018..3599316 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144091.1 CDS dppF NC_011147.1 3599626 3600639 R Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit complement(3599626..3600639) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144092.1 CDS dppD NC_011147.1 3600636 3601619 R DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit complement(3600636..3601619) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144093.1 CDS SSPA3254 NC_011147.1 3601630 3602532 R similar to Salmonella typhi CT18 dipeptide transport system permease protein DppC; dipeptide transporter complement(3601630..3602532) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144094.1 CDS SSPA3255 NC_011147.1 3602542 3603561 R transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB complement(3602542..3603561) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144095.1 CDS SSPA3256 NC_011147.1 3603718 3605274 R similar to Salmonella typhi CT18 periplasmic dipeptide transport protein precursor; dipeptide transport protein complement(3603718..3605274) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144096.1 CDS SSPA3257 NC_011147.1 3605882 3607207 R similar to Salmonella typhimurium xanthine permease; xanthine permease complement(3605882..3607207) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144097.1 CDS SSPA3258 NC_011147.1 3607265 3608389 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3607265..3608389) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144098.1 CDS SSPA3259 NC_011147.1 3608539 3609546 D similar to Salmonella typhi CT18 lacI-family transcriptional regulator; lacI-family transcriptional regulator 3608539..3609546 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144099.1 CDS yhjW NC_011147.1 3609873 3611564 R catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase complement(3609873..3611564) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144100.1 CDS SSPA3260 NC_011147.1 3611795 3612499 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3611795..3612499) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144101.1 CDS SSPA3261 NC_011147.1 3612656 3613237 D 'constitutive, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine'; 3-methyladenine DNA glycosylase 3612656..3613237 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144102.1 CDS SSPA3262 NC_011147.1 3613215 3613655 D similar to Salmonella typhi CT18 acetyltransferase; hypothetical protein 3613215..3613655 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144103.1 CDS SSPA3263 NC_011147.1 3613624 3615957 R similar to Salmonella typhi CT18 biotin sulfoxide reductase; biotin sulfoxide reductase complement(3613624..3615957) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144104.1 CDS SSPA3264 NC_011147.1 3616143 3616760 D similar to Salmonella typhi CT18 outer membrane protein; outer membrane lipoprotein 3616143..3616760 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144105.1 CDS SSPA3265 NC_011147.1 3616979 3617953 D similar to Salmonella typhi CT18 2-hydroxyacid dehydrogenase; 2-hydroxyacid dehydrogenase 3616979..3617953 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144106.1 CDS SSPA3266 NC_011147.1 3618003 3618713 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3618003..3618713) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144953.1 CDS SSPA3266a NC_011147.1 3619110 3619442 D transcriptional regulator 3619110..3619442 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144107.1 CDS SSPA3267 NC_011147.1 3619730 3619942 D similar to Salmonella typhi CT18 cold shock protein; major cold shock protein 3619730..3619942 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144108.1 CDS SSPA3268 NC_011147.1 3620120 3620659 D hypothetical protein 3620120..3620659 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144109.1 CDS SSPA3269 NC_011147.1 3621033 3621518 R similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase complement(3621033..3621518) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144110.1 CDS SSPA3270 NC_011147.1 3621506 3621793 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3621506..3621793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144111.1 CDS SSPA3271 NC_011147.1 3621971 3622438 R similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase complement(3621971..3622438) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144954.1 CDS SSPA3271a NC_011147.1 3622649 3623083 R hypothetical protein complement(3622649..3623083) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144113.1 CDS glyS NC_011147.1 3623398 3625467 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(3623398..3625467) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144114.1 CDS glyQ NC_011147.1 3625477 3626388 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(3625477..3626388) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144115.1 CDS SSPA3275 NC_011147.1 3626527 3626829 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(3626527..3626829) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144116.1 CDS SSPA3276 NC_011147.1 3626995 3627990 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 3626995..3627990 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144117.1 CDS SSPA3277 NC_011147.1 3628013 3628366 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3628013..3628366) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144118.1 CDS SSPA3278 NC_011147.1 3628541 3629995 R similar to Salmonella typhi CT18 xylulose kinase; xylulose kinase complement(3628541..3629995) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144119.1 CDS SSPA3280 NC_011147.1 3631735 3632913 D similar to Salmonella typhi CT18 xylose operon regulatory protein; xylose operon regulatory protein 3631735..3632913 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144120.1 CDS SSPA3281 NC_011147.1 3632974 3633798 R similar to Salmonella typhi CT18 exported amidase; hypothetical protein complement(3632974..3633798) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144121.1 CDS malS NC_011147.1 3634114 3636141 D 'periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds'; periplasmic alpha-amylase 3634114..3636141 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144122.1 CDS avtA NC_011147.1 3636315 3637565 D 'transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis'; valine--pyruvate transaminase 3636315..3637565 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144123.1 CDS SSPA3284 NC_011147.1 3637602 3638075 R similar to Salmonella typhi CT18 electron-transport protein; electron-transport protein complement(3637602..3638075) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144124.1 CDS SSPA3285 NC_011147.1 3638192 3638992 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(3638192..3638992) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144125.1 CDS SSPA3286 NC_011147.1 3639222 3640220 D 'NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate'; 2,3-diketo-L-gulonate reductase 3639222..3640220 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144126.1 CDS SSPA3287 NC_011147.1 3640232 3640696 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3640232..3640696 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144127.1 CDS SSPA3288 NC_011147.1 3641791 3642264 D 'membrane-spanning protein involved in uptake of 2,3-diketo-L-gulonate; part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO'; 2,3-diketo-L-gulonate TRAP transporter small permease YiaM 3641791..3642264 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144128.1 CDS SSPA3289 NC_011147.1 3642267 3643544 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3642267..3643544 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144129.1 CDS SSPA3290 NC_011147.1 3643556 3644542 D similar to Salmonella typhimurium dicarboxylate-binding periplasmic protein; dicarboxylate-binding periplasmic protein 3643556..3644542 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144130.1 CDS SSPA3291 NC_011147.1 3644546 3646012 D similar to Salmonella typhi CT18 L-xylulose kinase; C-terminal deletion relative to other Salmonella enterica; L-xylulose kinase 3644546..3646012 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144131.1 CDS sgbH NC_011147.1 3646009 3646671 D catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate; 3-keto-L-gulonate-6-phosphate decarboxylase 3646009..3646671 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144132.1 CDS SSPA3293 NC_011147.1 3646664 3647524 D 'L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate'; L-xylulose 5-phosphate 3-epimerase 3646664..3647524 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144133.1 CDS sgbE NC_011147.1 3647518 3648213 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 3647518..3648213 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144134.1 CDS SSPA3295 NC_011147.1 3648374 3649189 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(3648374..3649189) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144135.1 CDS SSPA3296 NC_011147.1 3649453 3651408 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3649453..3651408 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144136.1 CDS SSPA3297 NC_011147.1 3651694 3653232 R similar to Salmonella typhi CT18 aldehyde dehydrogenase B; aldehyde dehydrogenase B complement(3651694..3653232) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144137.1 CDS SSPA3298 NC_011147.1 3653401 3654282 D similar to Salmonella typhi CT18 sugar kinase; sugar kinase 3653401..3654282 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144138.1 CDS SSPA3299 NC_011147.1 3654530 3656380 R similar to Salmonella typhi CT18 selenocysteine-specific elongation factor; selenocysteinyl-tRNA-specific translation factor complement(3654530..3656380) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144139.1 CDS SSPA3300 NC_011147.1 3656377 3657768 R catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase complement(3656377..3657768) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144140.1 CDS SSPA3301 NC_011147.1 3657867 3658475 R similar to Salmonella typhi CT18 glutathione transferase; glutathione S-transferase complement(3657867..3658475) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144141.1 CDS SSPA3302 NC_011147.1 3658951 3660867 D similar to Salmonella typhi CT18 mannitol-specific enzyme II of phosphotransferase system; mannitol-specific enzyme II of phosphotransferase system 3658951..3660867 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144142.1 CDS SSPA3303 NC_011147.1 3661088 3662236 D similar to Salmonella typhi CT18 mannitol-1-phosphate dehydrogenase; mannitol-1-phosphate 5-dehydrogenase 3661088..3662236 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144143.1 CDS SSPA3304 NC_011147.1 3662832 3663041 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3662832..3663041) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144144.1 CDS SSPA3305 NC_011147.1 3663332 3663694 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3663332..3663694 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144145.1 CDS SSPA3306 NC_011147.1 3664181 3664864 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 3664181..3664864 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144146.1 CDS SSPA3307 NC_011147.1 3669534 3671189 D similar to Salmonella typhi CT18 L-lactate permease; L-lactate permease 3669534..3671189 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144147.1 CDS SSPA3308 NC_011147.1 3671186 3671962 D represses the lctPRD operon; DNA-binding transcriptional repressor LldR 3671186..3671962 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144148.1 CDS lldD NC_011147.1 3671959 3673149 D flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 3671959..3673149 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144149.1 CDS SSPA3310 NC_011147.1 3673214 3673687 D member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates; tRNA/rRNA methyltransferase YibK 3673214..3673687 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144150.1 CDS SSPA3311 NC_011147.1 3673755 3674810 R similar to Salmonella typhi CT18 lacI family transcriptional regulator regulator; lacI family transcriptional regulator complement(3673755..3674810) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144151.1 CDS SSPA3312 NC_011147.1 3675078 3676274 D similar to Salmonella typhi CT18 racemase; racemase 3675078..3676274 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144152.1 CDS SSPA3313 NC_011147.1 3676348 3677658 D similar to |16077317|ref|NP_388130.1| similar to glucarate transporter [Bacillus subtilis]; hypothetical protein 3676348..3677658 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144153.1 CDS cysE NC_011147.1 3677741 3678562 R catalyzes the O-acetylation of serine; serine acetyltransferase complement(3677741..3678562) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144154.1 CDS gpsA NC_011147.1 3678640 3679659 R catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(3678640..3679659) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144155.1 CDS SSPA3316 NC_011147.1 3679659 3680126 R molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB complement(3679659..3680126) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144156.1 CDS SSPA3317 NC_011147.1 3680170 3680421 R similar to Salmonella typhi CT18 glutaredoxin 3; glutaredoxin 3 complement(3680170..3680421) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144157.1 CDS SSPA3318 NC_011147.1 3680507 3680938 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(3680507..3680938) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144158.1 CDS SSPA3319 NC_011147.1 3681207 3682730 D catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 3681207..3682730 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144159.1 CDS SSPA3320 NC_011147.1 3682740 3684023 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3682740..3684023 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144160.1 CDS SSPA3321 NC_011147.1 3684027 3684989 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3684027..3684989 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144161.1 CDS SSPA3322 NC_011147.1 3684976 3686010 R similar to Salmonella typhi Ty2 glycosyl transferase; glycosyl transferase family protein complement(3684976..3686010) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144162.1 CDS tdh NC_011147.1 3686505 3687530 R 'converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism'; L-threonine 3-dehydrogenase complement(3686505..3687530) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144163.1 CDS SSPA3324 NC_011147.1 3687540 3688736 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(3687540..3688736) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144164.1 CDS rfaD NC_011147.1 3688939 3689871 D catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 3688939..3689871 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144165.1 CDS SSPA3326 NC_011147.1 3689874 3690920 D catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase 3689874..3690920 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144166.1 CDS SSPA3327 NC_011147.1 3690920 3691873 D similar to Salmonella typhi Ty2 lipopolysaccharide heptosyltransferase-1; ADP-heptose--LPS heptosyltransferase 3690920..3691873 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144167.1 CDS SSPA3328 NC_011147.1 3691913 3693127 D similar to Salmonella typhi Ty2 O-antigen ligase; O-antigen ligase 3691913..3693127 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144168.1 CDS waaK NC_011147.1 3693183 3694328 R lipopolysaccharide 1,2-N-acetylglucosaminetransferase complement(3693183..3694328) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144169.1 CDS SSPA3330 NC_011147.1 3694428 3695237 R similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein RfaZ; lipopolysaccharide core biosynthesis protein complement(3694428..3695237) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144170.1 CDS waaY NC_011147.1 3695387 3696085 R lipopolysaccharide core biosynthesis protein complement(3695387..3696085) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144171.1 CDS SSPA3332 NC_011147.1 3696108 3697118 R 'similar to Salmonella typhi Ty2 lipopolysaccharide 1,2-glucosyltransferase'; lipopolysaccharide 1,2-glucosyltransferase complement(3696108..3697118) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144172.1 CDS SSPA3333 NC_011147.1 3697136 3698149 R 'similar to Salmonella typhi Ty2 lipopolysaccharide 1,3-galactosyltransferase'; lipopolysaccharide 1,3-galactosyltransferase complement(3697136..3698149) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144173.1 CDS SSPA3334 NC_011147.1 3698155 3699234 R 'similar to Salmonella typhi Ty2 lipopolysaccharide 1,6-galactosyltransferase'; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase complement(3698155..3699234) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144174.1 CDS SSPA3335 NC_011147.1 3699248 3700228 R similar to |21952254|gb|AAM82549.1| WabA-like protein [Salmonella enterica]; hypothetical protein complement(3699248..3700228) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144175.1 CDS SSPA3336 NC_011147.1 3700284 3701081 R similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein complement(3700284..3701081) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144176.1 CDS SSPA3337 NC_011147.1 3701074 3702198 R similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein complement(3701074..3702198) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144177.1 CDS SSPA3338 NC_011147.1 3702195 3703229 R similar to Salmonella typhi Ty2 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein complement(3702195..3703229) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144178.2 CDS SSPA3339 NC_011147.1 3703674 3704951 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 3703674..3704951 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144179.1 CDS coaD NC_011147.1 3704960 3705439 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 3704960..3705439 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144180.1 CDS SSPA3341 NC_011147.1 3705467 3706276 R Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase complement(3705467..3706276) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144181.1 CDS rpmG NC_011147.1 3706374 3706541 R 'in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif'; 50S ribosomal protein L33 complement(3706374..3706541) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144182.1 CDS rpmB NC_011147.1 3706555 3706791 R required for 70S ribosome assembly; 50S ribosomal protein L28 complement(3706555..3706791) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144183.1 CDS radC NC_011147.1 3707009 3707674 R Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC complement(3707009..3707674) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144184.1 CDS SSPA3345 NC_011147.1 3707850 3709070 D 'catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine'; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 3707850..3709070 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144185.1 CDS dut NC_011147.1 3709051 3709506 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 3709051..3709506 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144186.1 CDS slmA NC_011147.1 3709614 3710210 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 3709614..3710210 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144187.1 CDS pyrE NC_011147.1 3710288 3710929 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(3710288..3710929) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144188.1 CDS rph NC_011147.1 3711008 3711724 R RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH complement(3711008..3711724) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144189.1 CDS SSPA3350 NC_011147.1 3711850 3712713 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3711850..3712713 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144190.1 CDS SSPA3351 NC_011147.1 3712763 3713620 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(3712763..3713620) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144191.1 CDS SSPA3352 NC_011147.1 3713739 3714623 D similar to Salmonella typhi CT18 beta-lactamase; beta-lactamase 3713739..3714623 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144192.1 CDS SSPA3353 NC_011147.1 3714871 3715488 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3714871..3715488 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144193.1 CDS ligB NC_011147.1 3715485 3717170 R this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB complement(3715485..3717170) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144194.1 CDS gmk NC_011147.1 3717427 3718050 D 'Essential for recycling GMP and indirectly, cGMP'; guanylate kinase 3717427..3718050 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144195.1 CDS rpoZ NC_011147.1 3718105 3718380 D promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 3718105..3718380 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144196.1 CDS SSPA3357 NC_011147.1 3718399 3720510 D 'similar to Salmonella typhi CT18 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; CG Site No. 156'; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 3718399..3720510 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144197.1 CDS SSPA3358 NC_011147.1 3720515 3721204 D specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 3720515..3721204 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144198.1 CDS SSPA3359 NC_011147.1 3721210 3723291 D catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 3721210..3723291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144199.1 CDS SSPA3360 NC_011147.1 3723327 3724532 R similar to Salmonella typhi CT18 glutamate permease; glutamate permease complement(3723327..3724532) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144200.1 CDS SSPA3361 NC_011147.1 3724760 3726151 D similar to Salmonella typhi CT18 purine permease; purine permease 3724760..3726151 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144201.1 CDS SSPA3362 NC_011147.1 3726272 3727981 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 3726272..3727981 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144202.1 CDS SSPA3363 NC_011147.1 3730414 3731796 R may be involved in the transport of galactosides-pentoses-hexuronides; transporter complement(3730414..3731796) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144203.1 CDS SSPA3364 NC_011147.1 3732495 3732839 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3732495..3732839) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144204.1 CDS SSPA3365 NC_011147.1 3733399 3733995 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3733399..3733995 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144205.1 CDS SSPA3366 NC_011147.1 3735111 3736094 D similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 3735111..3736094 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144206.1 CDS SSPA3369 NC_011147.1 3737812 3738429 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3737812..3738429 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144207.1 CDS SSPA3370 NC_011147.1 3738504 3741356 D similar to Salmonella typhimurium autotransported protein; autotransported protein 3738504..3741356 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144208.1 CDS fidL NC_011147.1 3741451 3741813 R hypothetical protein complement(3741451..3741813) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144209.2 CDS SSPA3372 NC_011147.1 3741926 3742714 R similar to Salmonella typhimurium transcriptional regulatory protein; transcriptional regulator complement(3741926..3742714) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144210.1 CDS SSPA3373 NC_011147.1 3743568 3744248 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3743568..3744248 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144211.1 CDS SSPA3374 NC_011147.1 3744571 3745050 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(3744571..3745050) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144212.1 CDS SSPA3375 NC_011147.1 3745365 3748091 R 'similar to Salmonella typhi CT18 Magnesium transport ATPase, P-type 2'; magnesium transport ATPase complement(3745365..3748091) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144213.1 CDS SSPA3376 NC_011147.1 3748311 3749006 R similar to Salmonella typhi CT18 conserved hyopthetical protein; hypothetical protein complement(3748311..3749006) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144214.1 CDS SSPA3377 NC_011147.1 3749512 3750414 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3749512..3750414 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144215.1 CDS SSPA3378 NC_011147.1 3750457 3751398 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3750457..3751398) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144216.1 CDS SSPA3379 NC_011147.1 3751634 3752377 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3751634..3752377) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144217.1 CDS SSPA3380 NC_011147.1 3752364 3753473 R similar to Salmonella typhi CT18 transferase; transferase complement(3752364..3753473) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144218.1 CDS SSPA3381 NC_011147.1 3753477 3754334 R similar to Salmonella typhi CT18 PTS system protein; PTS system protein complement(3753477..3754334) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144219.1 CDS SSPA3382 NC_011147.1 3754334 3755083 R similar to Salmonella typhi CT18 PTS system protein; PTS system protein complement(3754334..3755083) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144220.1 CDS SSPA3383 NC_011147.1 3755229 3755714 R similar to Salmonella typhi CT18 PTS system protein; PTS system protein complement(3755229..3755714) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144221.1 CDS SSPA3384 NC_011147.1 3755725 3756150 R similar to Salmonella typhi CT18 PTS system protein; PTS system protein complement(3755725..3756150) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144222.1 CDS SSPA3385 NC_011147.1 3756369 3759167 R 'similar to Salmonella typhimurium NtrC family transcriptional regulators, ATPase domain'; NtrC family transcriptional regulator complement(3756369..3759167) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144223.1 CDS SSPA3386 NC_011147.1 3759364 3759657 D similar to Salmonella typhi CT18 secreted protein; hypothetical protein 3759364..3759657 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144224.1 CDS SSPA3387 NC_011147.1 3759763 3761136 D similar to Salmonella typhi CT18 glycosyl hydrolase; glycosyl hydrolase 3759763..3761136 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144225.1 CDS nepI NC_011147.1 3761196 3762389 R experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS; ribonucleoside transporter complement(3761196..3762389) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144226.1 CDS SSPA3389 NC_011147.1 3762948 3763271 D similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 3762948..3763271 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144227.1 CDS SSPA3390 NC_011147.1 3763362 3763631 R similar to Salmonella typhi CT18 PTS system phosphocarrier protein; PTS system phosphocarrier protein complement(3763362..3763631) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144228.1 CDS gatY NC_011147.1 3763641 3764501 R 'class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis'; fructose-1,6-bisphosphate aldolase complement(3763641..3764501) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144229.1 CDS SSPA3392 NC_011147.1 3764564 3766048 R similar to Salmonella typhi CT18 carbohydrate kinase; carbohydrate kinase complement(3764564..3766048) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144230.1 CDS SSPA3393 NC_011147.1 3766041 3767399 R similar to Salmonella typhi CT18 PTS system IIC component; PTS system transporter subunit IIC complement(3766041..3767399) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144231.1 CDS SSPA3394 NC_011147.1 3767475 3767762 R similar to Salmonella typhi CT18 PTS system IIB component; PTS system transporter subunit IIB complement(3767475..3767762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144232.1 CDS SSPA3395 NC_011147.1 3767759 3768232 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3767759..3768232) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144233.1 CDS SSPA3396 NC_011147.1 3768250 3768993 R similar to Salmonella typhi CT18 GntR-family transcriptional regulator; GntR family transcriptional regulator complement(3768250..3768993) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144234.1 CDS SSPA3397 NC_011147.1 3769346 3769798 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(3769346..3769798) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144235.1 CDS SSPA3398 NC_011147.1 3774364 3774954 R 'response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter'; DNA-binding transcriptional activator UhpA complement(3774364..3774954) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144236.1 CDS SSPA3399 NC_011147.1 3775108 3776121 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3775108..3776121) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144237.1 CDS SSPA3400 NC_011147.1 3776133 3777449 R similar to Salmonella typhi CT18 probable permease; permease complement(3776133..3777449) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144238.1 CDS SSPA3401 NC_011147.1 3777480 3778400 R similar to Salmonella typhi CT18 carbohydrate kinase; carbohydrate kinase complement(3777480..3778400) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144239.1 CDS SSPA3402 NC_011147.1 3778714 3779499 D similar to Salmonella typhi CT18 DeoR-family transcriptional regulator; DeoR-family transcriptional regulator 3778714..3779499 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144240.1 CDS SSPA3403 NC_011147.1 3779501 3779791 R 'with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit'; acetolactate synthase 1 regulatory subunit complement(3779501..3779791) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144241.1 CDS SSPA3404 NC_011147.1 3779795 3781483 R 'similar to Salmonella typhi CT18 acetohydroxy acid synthase I, small subunit'; acetolactate synthase catalytic subunit complement(3779795..3781483) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144242.1 CDS SSPA3405 NC_011147.1 3781590 3781688 R similar to Salmonella typhi CT18 ilvBN operon attenuator peptide; ilvB operon leader peptide complement(3781590..3781688) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144243.1 CDS SSPA3406 NC_011147.1 3782504 3783364 D 'similar to |23501593|ref|NP_697720.1| membrane protein, [Brucella suis 1330]'; hypothetical protein 3782504..3783364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144244.1 CDS emrD NC_011147.1 3783567 3784712 D multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D 3783567..3784712 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144245.1 CDS SSPA3408 NC_011147.1 3784639 3785724 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3784639..3785724) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144246.1 CDS SSPA3409 NC_011147.1 3785788 3786711 R regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC complement(3785788..3786711) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144247.1 CDS SSPA3410 NC_011147.1 3786937 3788274 D member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; permease DsdX 3786937..3788274 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144248.1 CDS SSPA3411 NC_011147.1 3788292 3789614 D catalyzes the formation of pyruvate from serine; D-serine dehydratase 3788292..3789614 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144249.1 CDS SSPA3412 NC_011147.1 3789696 3790226 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3789696..3790226) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144250.1 CDS SSPA3413 NC_011147.1 3790223 3790585 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3790223..3790585) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144251.1 CDS SSPA3414 NC_011147.1 3790575 3790922 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(3790575..3790922) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144252.1 CDS SSPA3415 NC_011147.1 3791365 3793026 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3791365..3793026) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144253.1 CDS SSPA3416 NC_011147.1 3793215 3793643 R '16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent'; heat shock chaperone IbpB complement(3793215..3793643) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144254.1 CDS SSPA3417 NC_011147.1 3793753 3794166 R with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA complement(3793753..3794166) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144255.1 CDS SSPA3418 NC_011147.1 3794473 3794808 D similar to Salmonella typhi CT18 lipoprotein; hypothetical protein 3794473..3794808 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144256.1 CDS SSPA3419 NC_011147.1 3794810 3796036 R similar to Salmonella typhi CT18 ATP/GTP-binding protein; ATP/GTP-binding protein complement(3794810..3796036) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144257.1 CDS dsbE2 NC_011147.1 3797103 3797660 R thiol:disulfide interchange protein complement(3797103..3797660) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144258.1 CDS ccmF2 NC_011147.1 3797657 3799588 R cytochrome c-type biogenesis protein F2 complement(3797657..3799588) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144259.1 CDS ccmE2 NC_011147.1 3799585 3800064 R CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE complement(3799585..3800064) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144260.1 CDS SSPA3423 NC_011147.1 3800061 3800273 R similar to Salmonella typhi Ty2 heme exporter protein D1; heme exporter protein D1 complement(3800061..3800273) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144261.1 CDS SSPA3424 NC_011147.1 3800270 3801007 R similar to Salmonella typhi Ty2 heme exporter protein C1; heme exporter protein C1 complement(3800270..3801007) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144262.1 CDS SSPA3425 NC_011147.1 3801715 3802332 R ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA complement(3801715..3802332) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144263.1 CDS SSPA3426 NC_011147.1 3802338 3803738 R similar to Salmonella typhi CT18 probable cytochrome c peroxidase; cytochrome c peroxidase complement(3802338..3803738) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144264.1 CDS torD NC_011147.1 3803928 3804560 R 'TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor'; chaperone protein TorD complement(3803928..3804560) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144265.1 CDS SSPA3428 NC_011147.1 3804553 3807105 R similar to Salmonella typhi CT18 trimethylamine-N-oxide reductase precursor; trimethylamine-N-oxide reductase complement(3804553..3807105) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144266.1 CDS SSPA3429 NC_011147.1 3807095 3808279 R similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein complement(3807095..3808279) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144267.1 CDS SSPA3430 NC_011147.1 3808409 3809101 D response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes; DNA-binding transcriptional regulator TorR 3808409..3809101 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144268.1 CDS SSPA3431 NC_011147.1 3809074 3810114 R periplasmic sensory protein associated with the TorRS two-component regulatory system; TMAO reductase system periplasmic protein TorT complement(3809074..3810114) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144269.1 CDS SSPA3432 NC_011147.1 3810194 3812929 D Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide; hybrid sensory histidine kinase TorS 3810194..3812929 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144270.1 CDS SSPA3433 NC_011147.1 3812955 3814292 R 'similar to Salmonella typhimurium MFS family,D-galactonate transport protein'; MFS family D-galactonate transport protein complement(3812955..3814292) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144271.1 CDS dgoA NC_011147.1 3814377 3815525 R galactonate dehydratase complement(3814377..3815525) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144272.1 CDS SSPA3433b NC_011147.1 3815522 3816139 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(3815522..3816139) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144273.1 CDS gyrB NC_011147.1 3816485 3818899 R negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B complement(3816485..3818899) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144274.1 CDS recF NC_011147.1 3818928 3820001 R 'Required for DNA replication; binds preferentially to single-stranded, linear DNA'; recombination protein F complement(3818928..3820001) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144275.1 CDS SSPA3436 NC_011147.1 3820149 3821249 R binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta complement(3820149..3821249) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144276.1 CDS dnaA NC_011147.1 3821254 3822654 R binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein complement(3821254..3822654) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144277.1 CDS rpmH NC_011147.1 3823315 3823455 D in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 3823315..3823455 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144278.1 CDS rnpA NC_011147.1 3823472 3823831 D protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 3823472..3823831 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144279.1 CDS SSPA3440 NC_011147.1 3823795 3824052 D similar to Salmonella typhimurium inner membrane protein; hypothetical protein 3823795..3824052 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144280.1 CDS SSPA3441 NC_011147.1 3824055 3825701 D functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 3824055..3825701 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144281.1 CDS trmE NC_011147.1 3825843 3827207 D 'in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE'; tRNA modification GTPase TrmE 3825843..3827207 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144282.1 CDS SSPA3443 NC_011147.1 3827390 3828577 D Confers resistance to chloramphenicol; multidrug efflux system protein MdtL 3827390..3828577 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144283.1 CDS SSPA3444 NC_011147.1 3828603 3829505 D Involved in anaerobic NO protection; DNA-binding transcriptional regulator YidZ 3828603..3829505 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144284.1 CDS SSPA3445 NC_011147.1 3829663 3830418 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3829663..3830418 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144285.1 CDS SSPA3446 NC_011147.1 3830418 3831002 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3830418..3831002 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144286.1 CDS SSPA3447 NC_011147.1 3831047 3832510 R similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein complement(3831047..3832510) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144287.1 CDS SSPA3448 NC_011147.1 3832553 3833203 D 'YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily'; 6-phosphogluconate phosphatase 3832553..3833203 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144288.1 CDS SSPA3449 NC_011147.1 3833313 3834038 R regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU complement(3833313..3834038) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144289.1 CDS pstB NC_011147.1 3834053 3834826 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(3834053..3834826) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144290.1 CDS pstA NC_011147.1 3834913 3835803 R Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA complement(3834913..3835803) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144291.1 CDS pstC NC_011147.1 3835803 3836762 R part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC complement(3835803..3836762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144292.1 CDS SSPA3453 NC_011147.1 3836898 3837938 R similar to Salmonella typhi CT18 periplasmic phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(3836898..3837938) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144293.2 CDS SSPA3454 NC_011147.1 3838489 3839583 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3838489..3839583 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144294.1 CDS SSPA3455 NC_011147.1 3839733 3841562 R 'Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source'; glucosamine--fructose-6-phosphate aminotransferase complement(3839733..3841562) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144295.1 CDS glmU NC_011147.1 3841751 3843121 R forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(3841751..3843121) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144296.1 CDS SSPA3457 NC_011147.1 3843441 3844139 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3843441..3844139) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144297.1 CDS atpC NC_011147.1 3844369 3844788 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3844369..3844788) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144298.1 CDS SSPA3459 NC_011147.1 3844809 3846191 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3844809..3846191) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144299.1 CDS SSPA3460 NC_011147.1 3846218 3847081 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3846218..3847081) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144300.1 CDS SSPA3461 NC_011147.1 3847132 3848673 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3847132..3848673) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144301.1 CDS SSPA3462 NC_011147.1 3848686 3849219 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3848686..3849219) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144302.1 CDS SSPA3463 NC_011147.1 3849234 3849704 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(3849234..3849704) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144303.1 CDS SSPA3464 NC_011147.1 3849764 3850003 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(3849764..3850003) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144304.1 CDS SSPA3465 NC_011147.1 3850050 3850865 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3850050..3850865) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144305.1 CDS SSPA3466 NC_011147.1 3850874 3851254 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I complement(3850874..3851254) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144306.1 CDS gidB NC_011147.1 3851870 3852493 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3851870..3852493) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144307.1 CDS SSPA3468 NC_011147.1 3852596 3854485 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3852596..3854485) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144308.1 CDS SSPA3469 NC_011147.1 3854864 3855307 R 'An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group'; flavodoxin complement(3854864..3855307) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144309.1 CDS SSPA3470 NC_011147.1 3855397 3855855 R transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC complement(3855397..3855855) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144310.1 CDS SSPA3471 NC_011147.1 3856006 3856998 D catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 3856006..3856998 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144311.1 CDS yieM NC_011147.1 3857003 3858403 R contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein complement(3857003..3858403) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144312.1 CDS SSPA3473 NC_011147.1 3858448 3859944 R 'interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase'; regulatory ATPase RavA complement(3858448..3859944) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144313.1 CDS trkD NC_011147.1 3860292 3862160 D Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 3860292..3862160 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144314.1 CDS SSPA3475 NC_011147.1 3862359 3862778 D cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 3862359..3862778 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144315.1 CDS SSPA3476 NC_011147.1 3862786 3864291 D with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 3862786..3864291 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144316.1 CDS rbsC NC_011147.1 3864297 3865262 D functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 3864297..3865262 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144317.1 CDS SSPA3477 NC_011147.1 3865287 3866177 D periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 3865287..3866177 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144318.1 CDS SSPA3478 NC_011147.1 3866310 3867239 D catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 3866310..3867239 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144319.1 CDS rbsR NC_011147.1 3867243 3868241 D DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR 3867243..3868241 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144320.1 CDS SSPA3479 NC_011147.1 3868207 3869634 R similar to Salmonella typhimurium MFS family tranport protein (1st mdule); MFS family tranport protein complement(3868207..3869634) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144321.1 CDS SSPA3480 NC_011147.1 3869646 3870350 R similar to Salmonella typhi CT18 hypothetical 20.8 kDa protein in rbsr-rrsc intergenic region; hypothetical protein complement(3869646..3870350) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144322.1 CDS SSPA3481 NC_011147.1 3876161 3876997 R Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR complement(3876161..3876997) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144323.1 CDS SSPA3482 NC_011147.1 3877116 3877454 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3877116..3877454 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144324.1 CDS SSPA3483 NC_011147.1 3877562 3878020 R insertion sequence element IS200 transposase complement(3877562..3878020) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144325.1 CDS SSPA3484 NC_011147.1 3878274 3879710 R 'similar to Salmonella typhimurium magnesium chelatase, subunit ChlI'; magnesium chelatase, subunit ChlI complement(3878274..3879710) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144326.1 CDS SSPA3485 NC_011147.1 3880300 3881946 D catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 3880300..3881946 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144327.1 CDS ilvM NC_011147.1 3881946 3882206 D 'similar to Salmonella typhi CT18 acetohydroxy acid synthase II, small subunit'; acetolactate synthase 2 regulatory subunit 3881946..3882206 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144328.1 CDS SSPA3487 NC_011147.1 3882224 3883153 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3882224..3883153 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144329.1 CDS SSPA3488 NC_011147.1 3883310 3885160 D 'catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis'; dihydroxy-acid dehydratase 3883310..3885160 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144330.1 CDS SSPA3489 NC_011147.1 3885163 3886707 D 'threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway'; threonine dehydratase 3885163..3886707 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144331.1 CDS SSPA3490 NC_011147.1 3886945 3887307 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3886945..3887307 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144332.1 CDS SSPA3491 NC_011147.1 3887304 3887645 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3887304..3887645 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144333.1 CDS SSPA3492 NC_011147.1 3887648 3888535 R participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY complement(3887648..3888535) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144334.1 CDS SSPA3493 NC_011147.1 3888700 3890175 D 'catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis'; ketol-acid reductoisomerase 3888700..3890175 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144335.1 CDS SSPA3494 NC_011147.1 3890267 3890548 R similar to Salmonella typhi CT18 peptidyl-prolyl cis-trans isomerase C; peptidyl-prolyl cis-trans isomerase C complement(3890267..3890548) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144336.1 CDS SSPA3495 NC_011147.1 3891015 3891443 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3891015..3891443 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144337.1 CDS SSPA3496 NC_011147.1 3891471 3892166 D similar to Salmonella typhi CT18 probable uridine phosphorylase; uridine phosphorylase 3891471..3892166 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144338.1 CDS SSPA3497 NC_011147.1 3892166 3892894 D similar to Salmonella typhi CT18 membrane transport protein; membrane transport protein 3892166..3892894 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144339.1 CDS SSPA3498 NC_011147.1 3892994 3895018 D single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 3892994..3895018 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144340.1 CDS SSPA3499 NC_011147.1 3895058 3896539 R 'catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation'; guanosine pentaphosphate phosphohydrolase complement(3895058..3896539) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144341.1 CDS rhlB NC_011147.1 3896658 3897923 R 'enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation'; ATP-dependent RNA helicase RhlB complement(3896658..3897923) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144342.1 CDS trxA NC_011147.1 3898067 3898396 D similar to Salmonella typhi CT18 thioredoxin; thioredoxin 3898067..3898396 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144343.1 CDS rho NC_011147.1 3898815 3900074 D An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 3898815..3900074 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144344.1 CDS SSPA3502 NC_011147.1 3900304 3901407 D similar to Salmonella typhi CT18 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 3900304..3901407 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144345.1 CDS SSPA3503 NC_011147.1 3901419 3902465 D Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 3901419..3902465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144346.1 CDS SSPA3504 NC_011147.1 3902521 3903651 D similar to Salmonella typhi CT18 UDP-N-acetyl-D-glucosamine 2-epimerase; UDP-N-acetyl-D-glucosamine 2-epimerase 3902521..3903651 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144347.1 CDS wecC NC_011147.1 3903648 3904910 D catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 3903648..3904910 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144348.1 CDS SSPA3506 NC_011147.1 3904910 3905977 D similar to Salmonella typhi CT18 UDP-N-acetylglucosamine epimerase (UDP-GlcNAc-2-epimerase); dTDP-glucose 4,6-dehydratase 3904910..3905977 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144349.1 CDS SSPA3507 NC_011147.1 3906010 3906891 D similar to Salmonella typhi Ty2 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 3906010..3906891 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144350.2 CDS SSPA3508 NC_011147.1 3906869 3907546 D similar to Salmonella typhi Ty2 lipopolysaccharide biosynthesis protein; TDP-fucosamine acetyltransferase 3906869..3907546 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144351.1 CDS SSPA3509 NC_011147.1 3907551 3908681 D catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 3907551..3908681 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144352.1 CDS SSPA3510 NC_011147.1 3908683 3909933 D similar to Salmonella typhi CT18 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 3908683..3909933 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144353.1 CDS SSPA3511 NC_011147.1 3909930 3911009 D catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 3909930..3911009 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144354.1 CDS SSPA3512 NC_011147.1 3911006 3912364 D enterobacterial common antigen polymerase; common antigen polymerase 3911006..3912364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144355.1 CDS SSPA3513 NC_011147.1 3912361 3913101 D similar to Salmonella typhi Ty2 probable UDP-N-acetyl-D-mannosaminuronic acid transferase; UDP-N-acetyl-D-mannosaminuronic acid transferase 3912361..3913101 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144356.1 CDS SSPA3514 NC_011147.1 3913308 3914693 D uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter 3913308..3914693 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144357.2 CDS SSPA3515 NC_011147.1 3915810 3917009 R similar to Salmonella typhi CT18 Porphyrin biosynthetic protein; protoheme IX biogenesis protein complement(3915810..3917009) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144358.1 CDS SSPA3516 NC_011147.1 3917009 3918178 R similar to Salmonella typhi CT18 uroporphyrinogen III methylase; uroporphyrinogen III C-methyltransferase complement(3917009..3918178) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144359.1 CDS hemD NC_011147.1 3918200 3918895 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase complement(3918200..3918895) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144360.1 CDS hemC NC_011147.1 3918937 3919878 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(3918937..3919878) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144361.1 CDS cyaA NC_011147.1 3920255 3922801 D catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 3920255..3922801 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144362.1 CDS SSPA3520 NC_011147.1 3922909 3923262 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3922909..3923262 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144363.1 CDS SSPA3521 NC_011147.1 3923448 3923990 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3923448..3923990 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144364.1 CDS SSPA3522 NC_011147.1 3924002 3924364 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3924002..3924364 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144365.1 CDS cyaY NC_011147.1 3924435 3924755 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(3924435..3924755) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144366.1 CDS SSPA3524 NC_011147.1 3924825 3925178 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(3924825..3925178) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144367.1 CDS SSPA3525 NC_011147.1 3925911 3926114 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 3925911..3926114 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144368.1 CDS dapF NC_011147.1 3926151 3926975 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3926151..3926975 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144369.1 CDS SSPA3527 NC_011147.1 3926972 3927679 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3926972..3927679 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144370.1 CDS xerC NC_011147.1 3927676 3928578 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3927676..3928578 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144371.1 CDS SSPA3529 NC_011147.1 3928578 3929294 D YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 3928578..3929294 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144372.1 CDS uvrD NC_011147.1 3929430 3931592 D unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 3929430..3931592 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144373.1 CDS SSPA3531 NC_011147.1 3932064 3933014 D responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 3932064..3933014 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144374.1 CDS SSPA3532 NC_011147.1 3933062 3933442 R hypothetical protein complement(3933062..3933442) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144375.1 CDS SSPA3533 NC_011147.1 3933617 3933913 D hypothetical protein 3933617..3933913 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144376.1 CDS SSPA3534 NC_011147.1 3933953 3934840 R similar to Salmonella typhi CT18 chloramphenicol-sensitive protein RarD; chloramphenicol-sensitive protein RarD complement(3933953..3934840) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144377.1 CDS SSPA3535 NC_011147.1 3934884 3935351 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(3934884..3935351) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144378.2 CDS SSPA3536 NC_011147.1 3935516 3936385 D catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 3935516..3936385 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144379.1 CDS SSPA3537 NC_011147.1 3936469 3938298 D 'functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway'; ATP-dependent DNA helicase RecQ 3936469..3938298 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144380.1 CDS SSPA3538 NC_011147.1 3938362 3938982 D similar to Salmonella typhi CT18 threonine efflux protein; threonine efflux system 3938362..3938982 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144381.1 CDS rhtB NC_011147.1 3939022 3939642 R similar to Salmonella typhi Ty2 homoserine/homoserine lactone efflux protein; homoserine/homoserine lactone efflux protein complement(3939022..3939642) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144382.1 CDS SSPA3540 NC_011147.1 3939753 3940769 D lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 3939753..3940769 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144383.1 CDS SSPA3541 NC_011147.1 3940785 3941585 D 'purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium'; sugar phosphatase 3940785..3941585 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144384.1 CDS SSPA3542 NC_011147.1 3941666 3942565 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 3941666..3942565 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144385.1 CDS SSPA3543 NC_011147.1 3942453 3943406 R similar to Salmonella typhi CT18 trans-activator of metE and metH; trans-activator of metE and metH complement(3942453..3943406) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144386.1 CDS SSPA3544 NC_011147.1 3943655 3945919 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3943655..3945919 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144387.1 CDS SSPA3545 NC_011147.1 3946263 3947606 D similar to Salmonella typhi CT18 regulatory protein; regulatory protein 3946263..3947606 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144388.1 CDS SSPA3546 NC_011147.1 3947686 3948498 R similar to Salmonella typhi Ty2 hydrolase; hydrolase complement(3947686..3948498) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144389.1 CDS SSPA3547 NC_011147.1 3948757 3949518 D catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 3948757..3949518 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144390.1 CDS SSPA3548 NC_011147.1 3949658 3951088 D YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; DNA recombination protein RmuC 3949658..3951088 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144391.1 CDS ubiE NC_011147.1 3951184 3951939 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 3951184..3951939 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144392.1 CDS SSPA3550 NC_011147.1 3951949 3952554 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3951949..3952554 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144393.1 CDS ubiB NC_011147.1 3952551 3954191 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 3952551..3954191 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144394.1 CDS tatA NC_011147.1 3954397 3954651 D TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 3954397..3954651 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144395.1 CDS SSPA3553 NC_011147.1 3954655 3955203 D mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 3954655..3955203 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144396.1 CDS SSPA3554 NC_011147.1 3955206 3955985 D with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 3955206..3955985 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144397.1 CDS SSPA3555 NC_011147.1 3956027 3956809 D magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 3956027..3956809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144398.1 CDS rfaH NC_011147.1 3956817 3957305 R similar to Salmonella typhi CT18 transcriptional activator; transcriptional activator RfaH complement(3956817..3957305) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144399.1 CDS SSPA3557 NC_011147.1 3957491 3958969 D catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3957491..3958969 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144400.1 CDS fre NC_011147.1 3959055 3959756 D NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 3959055..3959756 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144401.1 CDS fadA NC_011147.1 3962050 3963213 R FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase complement(3962050..3963213) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144402.1 CDS fadB NC_011147.1 3963234 3965411 R 'includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids'; multifunctional fatty acid oxidation complex subunit alpha complement(3963234..3965411) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144403.1 CDS SSPA3561 NC_011147.1 3965601 3966932 D catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 3965601..3966932 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144404.1 CDS SSPA3562 NC_011147.1 3966932 3967546 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3966932..3967546 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144405.1 CDS SSPA3563 NC_011147.1 3967585 3969036 D similar to Salmonella typhi CT18 trk system potassium uptake protein; potassium transporter 3967585..3969036 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144406.1 CDS hemG NC_011147.1 3969048 3969593 D catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 3969048..3969593 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144407.1 CDS SSPA3565 NC_011147.1 3975446 3975961 R in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein MobB complement(3975446..3975961) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144408.1 CDS mobA NC_011147.1 3975958 3976542 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(3975958..3976542) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144409.1 CDS SSPA3567 NC_011147.1 3976612 3976881 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3976612..3976881 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144410.1 CDS SSPA3568 NC_011147.1 3976958 3977944 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 3976958..3977944 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144411.1 CDS SSPA3569 NC_011147.1 3977961 3978584 D similar to Salmonella typhi CT18 thiol:disulfide interchange protein; protein disulfide isomerase I 3977961..3978584 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144412.1 CDS SSPA3570 NC_011147.1 3978597 3979505 R similar to Salmonella typhi CT18 acyltransferase; acyltransferase complement(3978597..3979505) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144413.1 CDS SSPA3571 NC_011147.1 3979893 3982679 D 'has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair'; DNA polymerase I 3979893..3982679 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144414.1 CDS engB NC_011147.1 3983013 3983612 R binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC complement(3983013..3983612) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144415.1 CDS SSPA3573 NC_011147.1 3983885 3984109 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 3983885..3984109 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144416.1 CDS SSPA3574 NC_011147.1 3984228 3984731 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 3984228..3984731 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144417.1 CDS SSPA3575 NC_011147.1 3984920 3986293 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3984920..3986293 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144418.1 CDS glnG NC_011147.1 3986606 3988015 R response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) complement(3986606..3988015) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144419.1 CDS glnL NC_011147.1 3988024 3989073 R sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) complement(3988024..3989073) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144420.1 CDS glnA NC_011147.1 3989348 3990757 R forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase complement(3989348..3990757) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144421.1 CDS SSPA3579 NC_011147.1 3990736 3991161 R similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein complement(3990736..3991161) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144422.1 CDS SSPA3580 NC_011147.1 3991133 3992956 D similar to Salmonella typhi CT18 GTP-binding protein; GTP-binding protein 3991133..3992956 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144423.1 CDS SSPA3582 NC_011147.1 3993730 3994608 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3993730..3994608) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144424.1 CDS SSPA3583 NC_011147.1 3994605 3995846 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3994605..3995846) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144425.1 CDS SSPA3584 NC_011147.1 3995848 3996723 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3995848..3996723) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144426.1 CDS SSPA3585 NC_011147.1 3996716 3997324 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3996716..3997324) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144427.1 CDS SSPA3586 NC_011147.1 3997754 3998602 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(3997754..3998602) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144428.1 CDS ompL NC_011147.1 3998759 3999451 R porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall; specific substrate still unknown; outer membrane porin L complement(3998759..3999451) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144429.1 CDS SSPA3588 NC_011147.1 3999519 4000940 R similar to Salmonella typhi CT18 membrane permease; membrane permease complement(3999519..4000940) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144430.1 CDS SSPA3589 NC_011147.1 4000986 4002368 R similar to Salmonella typhi CT18 membrane permease; membrane permease complement(4000986..4002368) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144431.1 CDS SSPA3590 NC_011147.1 4002414 4004450 R similar to Salmonella typhi CT18 glycosyl hydrolase; alpha-glucosidase complement(4002414..4004450) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144432.1 CDS SSPA3591 NC_011147.1 4004494 4005351 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4004494..4005351) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144433.1 CDS SSPA3592 NC_011147.1 4005355 4006596 R similar to Salmonella typhimurium isomerase; isomerase complement(4005355..4006596) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144434.1 CDS SSPA3593 NC_011147.1 4006612 4007490 R similar to Salmonella typhi CT18 aldolase; aldolase complement(4006612..4007490) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144435.1 CDS SSPA3594 NC_011147.1 4007513 4008409 R similar to Salmonella typhi CT18 oxidoreductase; oxidoreductase complement(4007513..4008409) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144436.1 CDS SSPA3595 NC_011147.1 4008564 4009460 D similar to Salmonella typhi CT18 sugar kinase; sugar kinase 4008564..4009460 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144437.1 CDS SSPA3596 NC_011147.1 4009494 4010297 D similar to Salmonella typhi CT18 DeoR-family transcriptional regulator; DeoR-family transcriptional regulator 4009494..4010297 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144438.1 CDS SSPA3597 NC_011147.1 4010488 4011087 D similar to Salmonella typhi CT18 haloacid dehalogenase-like hydrolase; phosphatase 4010488..4011087 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144439.1 CDS SSPA3598 NC_011147.1 4011946 4012383 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4011946..4012383 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144440.1 CDS SSPA3599 NC_011147.1 4012380 4013369 D similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 4012380..4013369 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144441.1 CDS SSPA3600 NC_011147.1 4013384 4013830 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4013384..4013830) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144442.1 CDS SSPA3601 NC_011147.1 4013781 4014137 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4013781..4014137) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144443.1 CDS SSPA3602 NC_011147.1 4014223 4015152 R similar to Salmonella typhi CT18 lipase; lipase complement(4014223..4015152) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144444.1 CDS SSPA3603 NC_011147.1 4015357 4015599 D similar to Salmonella typhi Ty2 CopG-family DNA-binding protein; CopG-family DNA-binding protein 4015357..4015599 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144445.1 CDS SSPA3604 NC_011147.1 4015599 4015973 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4015599..4015973 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144446.1 CDS SSPA3605 NC_011147.1 4016011 4016940 R required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE complement(4016011..4016940) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144447.1 CDS SSPA3606 NC_011147.1 4016937 4017572 R cytochrome b556(FDO) component; heme containing; formate dehydrogenase-O subunit gamma complement(4016937..4017572) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144448.1 CDS SSPA3607 NC_011147.1 4017569 4018471 R similar to Salmonella typhi CT18 formate dehydrogenase-O beta subunit; formate dehydrogenase-O subunit beta complement(4017569..4018471) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144449.1 CDS SSPA3608 NC_011147.1 4021724 4022560 D involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 4021724..4022560 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144450.1 CDS SSPA3609 NC_011147.1 4022828 4023859 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(4022828..4023859) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144451.1 CDS SSPA3610 NC_011147.1 4024041 4025141 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4024041..4025141 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144452.1 CDS SSPA3611 NC_011147.1 4025497 4025820 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(4025497..4025820) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144453.1 CDS SSPA3612 NC_011147.1 4025820 4026479 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(4025820..4026479) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144454.1 CDS SSPA3613 NC_011147.1 4026562 4027128 D similar to Salmonella typhi CT18 DNA-binding protein; DNA-binding protein 4026562..4027128 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144455.1 CDS SSPA3614 NC_011147.1 4027217 4027531 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4027217..4027531) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144456.1 CDS SSPA3615 NC_011147.1 4027528 4028676 R similar to Salmonella typhi CT18 alcohol dehydrogenase; alcohol dehydrogenase complement(4027528..4028676) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144457.1 CDS SSPA3616 NC_011147.1 4028803 4029630 R similar to Salmonella typhimurium rhamnulose-1-phosphate aldolase; rhamnulose-1-phosphate aldolase complement(4028803..4029630) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144458.1 CDS SSPA3617 NC_011147.1 4029773 4031032 R catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase complement(4029773..4031032) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144459.1 CDS rhaB NC_011147.1 4031029 4032498 R catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase complement(4031029..4032498) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144460.1 CDS SSPA3619 NC_011147.1 4032786 4033622 D activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 4032786..4033622 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144461.1 CDS SSPA3620 NC_011147.1 4033775 4034623 D activates the expression of rhaRS in response to L-rhamnose; transcriptional activator RhaR 4033775..4034623 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144462.1 CDS SSPA3621 NC_011147.1 4034620 4035654 R transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter complement(4034620..4035654) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144463.1 CDS SSPA3622 NC_011147.1 4036285 4036956 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4036285..4036956 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144464.1 CDS SSPA3623 NC_011147.1 4037113 4038420 R similar to Salmonella typhi CT18 possible integral membrane transport protein; integral membrane transport protein complement(4037113..4038420) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144465.1 CDS SSPA3624 NC_011147.1 4038413 4038928 R similar to Salmonella typhi CT18 possible membrane transport protein; membrane transport protein complement(4038413..4038928) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144466.1 CDS SSPA3625 NC_011147.1 4038947 4039930 R similar to Salmonella typhimurium dicarboxylate-binding periplasmic protein; dicarboxylate-binding periplasmic protein complement(4038947..4039930) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144467.1 CDS SSPA3626 NC_011147.1 4040259 4040879 D SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase 4040259..4040879 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144468.2 CDS SSPA3627 NC_011147.1 4040949 4041638 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4040949..4041638 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144469.1 CDS SSPA3628 NC_011147.1 4041650 4042045 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4041650..4042045 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144470.1 CDS cpxA NC_011147.1 4042096 4043469 R part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein complement(4042096..4043469) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144471.1 CDS SSPA3630 NC_011147.1 4043466 4044164 R response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR complement(4043466..4044164) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144472.1 CDS cpxP NC_011147.1 4044315 4044815 D repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; repressor CpxP 4044315..4044815 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144473.1 CDS fieF NC_011147.1 4044964 4045866 D 'member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers'; ferrous iron efflux protein F 4044964..4045866 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144474.1 CDS SSPA3633 NC_011147.1 4046051 4047013 D 'catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis'; 6-phosphofructokinase 4046051..4047013 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144475.1 CDS SSPA3634 NC_011147.1 4047217 4048206 D similar to Salmonella typhi CT18 periplasmic sulphate binding protein; sulfate transporter subunit 4047217..4048206 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144476.1 CDS SSPA3635 NC_011147.1 4048307 4049062 D similar to Salmonella typhi Ty2 CDP-diglyceride hydrolase; CDP-diacylglycerol pyrophosphatase 4048307..4049062 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144477.1 CDS SSPA3637 NC_011147.1 4050672 4051631 D phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase 4050672..4051631 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144478.1 CDS SSPA3638 NC_011147.1 4051641 4052681 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4051641..4052681 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144479.1 CDS SSPA3639 NC_011147.1 4052735 4053466 D similar to Salmonella typhi CT18 GntR-family regulatory protein; GntR family transcriptional regulator 4052735..4053466 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144480.1 CDS SSPA3642 NC_011147.1 4053971 4054321 R hypothetical protein complement(4053971..4054321) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144481.1 CDS SSPA3643 NC_011147.1 4054335 4055927 R similar to Salmonella typhi CT18 sugar kinase; autoinducer-2 (AI-2) kinase complement(4054335..4055927) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144482.1 CDS SSPA3644 NC_011147.1 4056016 4056975 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(4056016..4056975) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144483.1 CDS SSPA3645 NC_011147.1 4057231 4058766 D similar to Salmonella typhi CT18 ABC transporter ATP-binding protein; ABC transporter ATP-binding protein 4057231..4058766 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144484.1 CDS SSPA3646 NC_011147.1 4058760 4059803 D similar to Salmonella typhi CT18 ABC transporter permease protein; ABC transporter permease 4058760..4059803 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144485.1 CDS SSPA3647 NC_011147.1 4059803 4060801 D 'similar to Salmonella typhi CT18 ABC transporter, membrane component'; ABC transporter membrane protein 4059803..4060801 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144486.1 CDS SSPA3648 NC_011147.1 4060830 4061852 D 'similar to Salmonella typhi CT18 ABC transport protein, solute-binding component'; ABC transporter substrate-binding protein 4060830..4061852 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144487.1 CDS SSPA3649 NC_011147.1 4061881 4062756 D similar to Salmonella typhi CT18 aldolase; aldolase 4061881..4062756 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144488.1 CDS SSPA3650 NC_011147.1 4062800 4063129 D similar to Salmonella typhi CT18 conserved hypothetical protein; autoinducer-2 (AI-2) modifying protein LsrG 4062800..4063129 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144489.1 CDS SSPA3651 NC_011147.1 4063139 4063903 D similar to Salmonella typhi CT18 ribulose-phosphate 3-epimerase; epimerase 4063139..4063903 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144490.1 CDS tpiA NC_011147.1 4063995 4064762 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(4063995..4064762) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144491.1 CDS SSPA3653 NC_011147.1 4064875 4065471 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4064875..4065471) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144492.1 CDS SSPA3654 NC_011147.1 4066109 4066855 R similar to Salmonella typhi CT18 ferredoxin--NADP reductase; ferredoxin-NADP reductase complement(4066109..4066855) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144493.2 CDS glpX NC_011147.1 4066952 4067962 R 'type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese'; fructose 1,6-bisphosphatase II complement(4066952..4067962) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144494.1 CDS glpK NC_011147.1 4068074 4069582 R Converts glycerol and ADP to glycerol-3-phosphate and ADP; glycerol kinase complement(4068074..4069582) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144495.1 CDS SSPA3657 NC_011147.1 4069603 4070448 R similar to Salmonella typhi CT18 glycerol uptake facilitator protein; glycerol uptake facilitator protein complement(4069603..4070448) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144496.1 CDS SSPA3658 NC_011147.1 4070847 4071086 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4070847..4071086 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144497.1 CDS SSPA3659 NC_011147.1 4071308 4071793 R regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA complement(4071308..4071793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144498.1 CDS SSPA3660 NC_011147.1 4071886 4072815 R 'catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate'; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(4071886..4072815) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144499.1 CDS hslU NC_011147.1 4072882 4074213 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU complement(4072882..4074213) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144500.1 CDS SSPA3662 NC_011147.1 4074223 4074753 R heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit complement(4074223..4074753) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144501.1 CDS SSPA3663 NC_011147.1 4074845 4075816 R similar to Salmonella typhi CT18 cell division protein; cell division protein FtsN complement(4074845..4075816) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144502.1 CDS SSPA3664 NC_011147.1 4075910 4076935 R 'negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins'; DNA-binding transcriptional regulator CytR complement(4075910..4076935) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144503.1 CDS SSPA3665 NC_011147.1 4077090 4079288 R 'binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity'; primosome assembly protein PriA complement(4077090..4079288) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144504.1 CDS rpmE NC_011147.1 4079492 4079704 D 'RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome'; 50S ribosomal protein L31 4079492..4079704 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144505.1 CDS SSPA3667 NC_011147.1 4079749 4080411 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4079749..4080411) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144506.1 CDS SSPA3668 NC_011147.1 4080612 4082402 R similar to |6019467|gb|AAF02094.1| arylsulfotransferase [Pseudomonas putida]; hypothetical protein complement(4080612..4082402) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144507.1 CDS SSPA3669 NC_011147.1 4082858 4083175 R when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ complement(4082858..4083175) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144508.1 CDS SSPA3670 NC_011147.1 4083440 4084600 D catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 4083440..4084600 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144509.1 CDS metL NC_011147.1 4084603 4087035 D multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 4084603..4087035 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144510.1 CDS SSPA3672 NC_011147.1 4087151 4088008 R similar to Salmonella typhimurium inner membrane protein; inner membrane protein complement(4087151..4088008) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144511.1 CDS SSPA3673 NC_011147.1 4089244 4090368 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4089244..4090368) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144512.1 CDS SSPA3674 NC_011147.1 4090504 4092060 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4090504..4092060 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144513.1 CDS SSPA3675 NC_011147.1 4093561 4094667 D similar to Salmonella typhi CT18 alanine racemase; alanine racemase 4093561..4094667 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144514.1 CDS SSPA3676 NC_011147.1 4094612 4096093 R similar to Salmonella typhi CT18 GntR-family regulatory protein; GntR family transcriptional regulator complement(4094612..4096093) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144515.1 CDS metF NC_011147.1 4096372 4097262 D 'MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor'; 5,10-methylenetetrahydrofolate reductase 4096372..4097262 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144516.1 CDS SSPA3678 NC_011147.1 4097427 4099607 D similar to Salmonella typhi CT18 catalase (hydroperoxidase I); catalase 4097427..4099607 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144517.1 CDS gldA NC_011147.1 4099714 4100817 R forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase complement(4099714..4100817) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144518.1 CDS SSPA3680 NC_011147.1 4100829 4101491 R similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase complement(4100829..4101491) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144519.1 CDS SSPA3681 NC_011147.1 4101746 4102582 R similar to Salmonella typhi CT18 AraC-family transcriptional regulator; AraC family transcriptional regulator complement(4101746..4102582) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144520.1 CDS SSPA3682 NC_011147.1 4102743 4104476 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4102743..4104476) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144521.1 CDS SSPA3683 NC_011147.1 4104689 4107340 R catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase complement(4104689..4107340) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144522.1 CDS SSPA3684 NC_011147.1 4107709 4108860 R catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase complement(4107709..4108860) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144523.1 CDS argC NC_011147.1 4108949 4109953 D 'catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate'; N-acetyl-gamma-glutamyl-phosphate reductase 4108949..4109953 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144524.1 CDS SSPA3686 NC_011147.1 4109964 4110737 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 4109964..4110737 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144525.1 CDS SSPA3687 NC_011147.1 4110855 4112231 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 4110855..4112231 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144526.1 CDS SSPA3688 NC_011147.1 4112516 4113433 D 'Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA'; DNA-binding transcriptional regulator OxyR 4112516..4113433 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144527.1 CDS SSPA3689 NC_011147.1 4113416 4114816 R catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase complement(4113416..4114816) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144528.1 CDS SSPA3690 NC_011147.1 4115018 4115650 D 'negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis'; DNA-binding transcriptional repressor FabR 4115018..4115650 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144529.1 CDS SSPA3691 NC_011147.1 4115666 4116025 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4115666..4116025 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144530.1 CDS SSPA3692 NC_011147.1 4116072 4117172 R catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase complement(4116072..4117172) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144531.1 CDS btuB NC_011147.1 4117546 4119390 D involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 4117546..4119390 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144532.1 CDS SSPA3694 NC_011147.1 4119335 4120186 D 'converts L-glutamate to D-glutamate, a component of peptidoglycan'; glutamate racemase 4119335..4120186 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144533.1 CDS murB NC_011147.1 4125988 4127016 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 4125988..4127016 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144534.1 CDS SSPA3696 NC_011147.1 4127013 4127975 D 'catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon'; biotin--protein ligase 4127013..4127975 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144535.1 CDS SSPA3697 NC_011147.1 4128010 4128960 R catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase complement(4128010..4128960) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144536.1 CDS SSPA3698 NC_011147.1 4129169 4129342 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4129169..4129342) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144537.1 CDS SSPA3699 NC_011147.1 4129919 4131103 D 'EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu'; elongation factor Tu 4129919..4131103 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144538.1 CDS secE NC_011147.1 4131333 4131716 D 'forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force'; preprotein translocase subunit SecE 4131333..4131716 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144539.1 CDS nusG NC_011147.1 4131718 4132263 D Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 4131718..4132263 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144540.1 CDS rplK NC_011147.1 4132421 4132849 D binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4132421..4132849 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144541.1 CDS rplA NC_011147.1 4132853 4133557 D 'in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA'; 50S ribosomal protein L1 4132853..4133557 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144542.1 CDS rplJ NC_011147.1 4133973 4134470 D binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4133973..4134470 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144543.1 CDS rplL NC_011147.1 4134537 4134902 D 'present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors'; 50S ribosomal protein L7/L12 4134537..4134902 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144544.1 CDS rpoB NC_011147.1 4135220 4139248 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4135220..4139248 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144545.1 CDS SSPA3707 NC_011147.1 4139325 4143548 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4139325..4143548 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144546.1 CDS SSPA3708 NC_011147.1 4143635 4143916 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 4143635..4143916 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144547.1 CDS SSPA3709 NC_011147.1 4143918 4144355 R similar to |16121067|ref|NP_404380.1| hypothetical protein [Yersinia pestis]; hypothetical protein complement(4143918..4144355) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144548.1 CDS SSPA3710 NC_011147.1 4144676 4144864 D similar to Salmonella typhimurium cytoplasmic protein; hypothetical protein 4144676..4144864 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144549.1 CDS thiH NC_011147.1 4145015 4146148 R 'in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center'; thiamine biosynthesis protein ThiH complement(4145015..4146148) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144550.1 CDS thiG NC_011147.1 4146145 4146915 R functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase complement(4146145..4146915) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144551.1 CDS SSPA3713 NC_011147.1 4146917 4147117 R 'with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate'; sulfur carrier protein ThiS complement(4146917..4147117) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144552.1 CDS SSPA3714 NC_011147.1 4147098 4147856 R similar to Salmonella typhi CT18 thiamine biosynthesis protein; thiamine biosynthesis protein complement(4147098..4147856) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144553.1 CDS SSPA3715 NC_011147.1 4147849 4148484 R catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase complement(4147849..4148484) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144554.1 CDS SSPA3716 NC_011147.1 4148484 4150379 R required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC complement(4148484..4150379) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144555.1 CDS SSPA3717 NC_011147.1 4150743 4151231 R binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor complement(4150743..4151231) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144556.1 CDS nudC NC_011147.1 4151324 4152097 D can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 4151324..4152097 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144557.1 CDS hemE NC_011147.1 4152138 4153202 D catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 4152138..4153202 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144558.1 CDS SSPA3720 NC_011147.1 4153212 4153883 D 'Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures'; endonuclease V 4153212..4153883 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144559.1 CDS SSPA3721 NC_011147.1 4153925 4154515 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4153925..4154515 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144560.1 CDS SSPA3722 NC_011147.1 4154702 4154974 D histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 4154702..4154974 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144561.1 CDS SSPA3723 NC_011147.1 4155022 4155678 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4155022..4155678 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144562.1 CDS zraP NC_011147.1 4155720 4156175 R similar to Salmonella typhi CT18 possible exported protein; zinc resistance protein complement(4155720..4156175) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144563.1 CDS SSPA3725 NC_011147.1 4156429 4157826 D similar to Salmonella typhi CT18 two-component system sensor protein; sensor protein ZraS 4156429..4157826 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144564.1 CDS SSPA3726 NC_011147.1 4157832 4159157 D DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; transcriptional regulatory protein ZraR 4157832..4159157 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144565.1 CDS SSPA3727 NC_011147.1 4159154 4160443 R catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase complement(4159154..4160443) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144566.1 CDS purH NC_011147.1 4160455 4162044 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(4160455..4162044) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144567.1 CDS SSPA3729 NC_011147.1 4168016 4168453 R similar to Salmonella typhi CT18 acetyltransferase; hypothetical protein complement(4168016..4168453) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144568.1 CDS SSPA3730 NC_011147.1 4168610 4169539 D catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 4168610..4169539 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144569.1 CDS SSPA3731 NC_011147.1 4169808 4171409 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 4169808..4171409 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144570.1 CDS SSPA3732 NC_011147.1 4171441 4172745 D similar to Salmonella typhi CT18 isocitrate lyase; isocitrate lyase 4171441..4172745 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144571.1 CDS SSPA3733 NC_011147.1 4174562 4174996 R hypothetical protein complement(4174562..4174996) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144572.1 CDS SSPA3734 NC_011147.1 4174980 4175804 R 'regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase'; IclR family transcriptional regulator complement(4174980..4175804) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144573.1 CDS metH NC_011147.1 4176109 4179792 D one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4176109..4179792 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144574.2 CDS SSPA3736 NC_011147.1 4180059 4181690 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4180059..4181690 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144575.1 CDS SSPA3737 NC_011147.1 4181766 4182455 R alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E complement(4181766..4182455) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144576.1 CDS SSPA3738 NC_011147.1 4182527 4182628 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4182527..4182628 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144577.1 CDS SSPA3739 NC_011147.1 4182663 4183202 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4182663..4183202 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144578.1 CDS SSPA3740 NC_011147.1 4183249 4184118 D catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; 23S rRNA pseudouridine synthase F 4183249..4184118 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144579.1 CDS SSPA3741 NC_011147.1 4184115 4184387 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4184115..4184387) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144580.1 CDS SSPA3742 NC_011147.1 4184450 4185208 R similar to Salmonella typhi CT18 deoR family regulatory protein; deoR family regulatory protein complement(4184450..4185208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144581.1 CDS SSPA3743 NC_011147.1 4185195 4185920 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4185195..4185920) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144582.1 CDS SSPA3744 NC_011147.1 4186075 4186914 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4186075..4186914) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144583.1 CDS SSPA3745 NC_011147.1 4186938 4188416 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4186938..4188416) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144584.1 CDS SSPA3746 NC_011147.1 4188926 4190275 R catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III complement(4188926..4190275) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144585.1 CDS pgi NC_011147.1 4190620 4192269 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4190620..4192269 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144586.1 CDS SSPA3748 NC_011147.1 4192710 4192955 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4192710..4192955 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144587.1 CDS SSPA3749 NC_011147.1 4193019 4193657 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4193019..4193657 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144588.1 CDS SSPA3750 NC_011147.1 4193654 4194391 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4193654..4194391 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144589.2 CDS SSPA3751 NC_011147.1 4194391 4196487 D similar to Salmonella typhi CT18 lipoprotein; lipoprotein 4194391..4196487 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144590.1 CDS SSPA3752 NC_011147.1 4196630 4197040 D similar to Salmonella typhi CT18 membrane protein; phosphate-starvation-inducible protein PsiE 4196630..4197040 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144591.1 CDS malG NC_011147.1 4197206 4198096 R with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease complement(4197206..4198096) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144592.1 CDS malF NC_011147.1 4198111 4199655 R with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein complement(4198111..4199655) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144593.1 CDS malE NC_011147.1 4199787 4200977 R functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter substrate-binding protein complement(4199787..4200977) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144594.1 CDS SSPA3756 NC_011147.1 4201339 4202448 D with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein 4201339..4202448 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144595.1 CDS lamB NC_011147.1 4202537 4203895 D porin involved in the transport of maltose and maltodextrins; maltoporin 4202537..4203895 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144596.1 CDS SSPA3758 NC_011147.1 4204059 4204976 D similar to Salmonella typhi CT18 maltose operon periplasmic protein; maltose regulon periplasmic protein 4204059..4204976 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144597.1 CDS ubiC NC_011147.1 4205157 4205654 D catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 4205157..4205654 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144598.1 CDS ubiA NC_011147.1 4205668 4206540 D 'catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway'; 4-hydroxybenzoate octaprenyltransferase 4205668..4206540 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144599.1 CDS SSPA3761 NC_011147.1 4206639 4209059 R PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase complement(4206639..4209059) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144600.1 CDS SSPA3762 NC_011147.1 4209230 4209598 D similar to Salmonella typhi CT18 diacylglycerol kinase; diacylglycerol kinase 4209230..4209598 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144601.1 CDS SSPA3763 NC_011147.1 4209707 4210315 D Represses a number of genes involved in the response to DNA damage; LexA repressor 4209707..4210315 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144602.1 CDS SSPA3764 NC_011147.1 4210494 4211819 D similar to Salmonella typhi CT18 DNA-damage-inducible membrane protein; DNA-damage-inducible SOS response protein 4210494..4211819 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144603.1 CDS SSPA3765 NC_011147.1 4211819 4211929 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4211819..4211929 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144604.1 CDS SSPA3766 NC_011147.1 4211948 4212160 D unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential; stress-response protein 4211948..4212160 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144605.1 CDS SSPA3767 NC_011147.1 4212260 4212775 R 'Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB'; zinc uptake transcriptional repressor complement(4212260..4212775) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144606.1 CDS SSPA3768 NC_011147.1 4213022 4214323 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4213022..4214323 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144607.1 CDS SSPA3769 NC_011147.1 4214419 4215417 D similar to Salmonella typhi CT18 conserved hypothetical protein; tRNA-dihydrouridine synthase A 4214419..4215417 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144608.1 CDS pspG NC_011147.1 4215630 4215827 D coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 4215630..4215827 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144609.1 CDS SSPA3771 NC_011147.1 4216002 4216985 R similar to Salmonella typhi CT18 quinone oxidoreductase; NADPH-dependent quinone oxidoreductase complement(4216002..4216985) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144610.1 CDS SSPA3772 NC_011147.1 4217050 4218465 D unwinds double stranded DNA; replicative DNA helicase 4217050..4218465 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144611.1 CDS alr NC_011147.1 4218497 4219576 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4218497..4219576 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144612.1 CDS SSPA3774 NC_011147.1 4219762 4220955 D catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4219762..4220955 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144613.1 CDS aphA NC_011147.1 4221142 4221855 D Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; acid phosphatase/phosphotransferase 4221142..4221855 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144614.1 CDS SSPA3776 NC_011147.1 4221984 4222400 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4221984..4222400 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144615.1 CDS SSPA3777 NC_011147.1 4222403 4222759 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4222403..4222759 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144616.1 CDS SSPA3778 NC_011147.1 4222760 4223098 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4222760..4223098) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144617.1 CDS SSPA3779 NC_011147.1 4223085 4223528 R similar to Salmonella typhi CT18 lipoprotein; lipoprotein complement(4223085..4223528) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144618.1 CDS uvrA NC_011147.1 4223672 4226497 R 'The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate'; excinuclease ABC subunit A complement(4223672..4226497) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144619.1 CDS SSPA3781 NC_011147.1 4226745 4227275 D binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 4226745..4227275 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144620.1 CDS SSPA3782 NC_011147.1 4228464 4229096 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4228464..4229096 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144621.1 CDS SSPA3783 NC_011147.1 4229093 4230481 D similar to Salmonella typhi CT18 integral membrane protein; integral membrane protein 4229093..4230481 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144622.1 CDS SSPA3784 NC_011147.1 4230471 4231790 D similar to Salmonella typhi CT18 type-I secretion protein; type-I secretion protein 4230471..4231790 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144623.1 CDS SSPA3785 NC_011147.1 4231787 4233064 D similar to Salmonella typhi CT18 type-I secretion protein; type-I secretion protein 4231787..4233064 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144624.1 CDS SSPA3786 NC_011147.1 4233081 4246763 D similar to Salmonella typhimurium inner membrane protein; inner membrane protein 4233081..4246763 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144625.1 CDS SSPA3787 NC_011147.1 4246803 4248869 D similar to Salmonella typhi CT18 type-1 secretion protein; type-1 secretion protein 4246803..4248869 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144626.1 CDS SSPA3788 NC_011147.1 4249148 4249429 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4249148..4249429) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144627.1 CDS SSPA3789 NC_011147.1 4250016 4251593 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4250016..4251593 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144628.1 CDS SSPA3790 NC_011147.1 4251581 4251904 R regulates genes involved in response to oxidative stress; DNA-binding transcriptional regulator SoxS complement(4251581..4251904) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144629.1 CDS SSPA3791 NC_011147.1 4251991 4252449 D similar to Salmonella typhi CT18 SoxR protein; SoxR protein 4251991..4252449 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144630.1 CDS SSPA3792 NC_011147.1 4252742 4253410 D similar to Salmonella typhi CT18 glutathione S transferase; glutathione S-transferase 4252742..4253410 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144631.1 CDS SSPA3793 NC_011147.1 4253757 4255106 D similar to Salmonella typhi CT18 xanthine/uracil permeases family protein; xanthine/uracil permeases family protein 4253757..4255106 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144632.1 CDS SSPA3794 NC_011147.1 4255211 4256902 D similar to Salmonella typhi CT18 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger family protein 4255211..4256902 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144633.1 CDS SSPA3795 NC_011147.1 4256997 4257884 R similar to Salmonella typhi CT18 lysR family regulatory protein; LysR family transcriptional regulator complement(4256997..4257884) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144634.1 CDS SSPA3796 NC_011147.1 4257988 4258398 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4257988..4258398 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144635.1 CDS SSPA3797 NC_011147.1 4258391 4259080 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4258391..4259080 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144636.1 CDS actP NC_011147.1 4259119 4260768 R member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease complement(4259119..4260768) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144637.1 CDS SSPA3799 NC_011147.1 4261321 4263279 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(4261321..4263279) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144638.1 CDS SSPA3800 NC_011147.1 4263466 4263612 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4263466..4263612 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144639.1 CDS nrfA NC_011147.1 4263711 4265147 D catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 4263711..4265147 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144640.1 CDS SSPA3802 NC_011147.1 4265259 4265813 D 'part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia'; cytochrome c nitrite reductase pentaheme subunit 4265259..4265813 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144641.1 CDS SSPA3803 NC_011147.1 4265810 4266481 D similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein; cytochrome c-type biogenesis protein 4265810..4266481 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144642.1 CDS SSPA3804 NC_011147.1 4266478 4267434 D similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein; cytochrome c-type biogenesis protein 4266478..4267434 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144643.1 CDS SSPA3805 NC_011147.1 4267427 4269163 D with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552; heme lyase subunit NrfE 4267427..4269163 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144644.1 CDS SSPA3806 NC_011147.1 4269156 4269665 D similar to Salmonella typhi CT18 cytochrome c-type biogenesis protein; formate-dependent nitrite reductase complex subunit NrfF 4269156..4269665 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144645.1 CDS SSPA3807 NC_011147.1 4269662 4270282 D similar to Salmonella typhi CT18 NrfG protein; formate-dependent nitrite reductase complex subunit NrfG 4269662..4270282 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144646.1 CDS gltP NC_011147.1 4270627 4271937 D 'carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system'; glutamate/aspartate:proton symporter 4270627..4271937 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144647.2 CDS SSPA3809 NC_011147.1 4272094 4272783 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(4272094..4272783) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144648.1 CDS SSPA3811 NC_011147.1 4275473 4276381 R similar to Salmonella typhi CT18 membrane-bound beta-hydroxylase; membrane-bound beta-hydroxylase complement(4275473..4276381) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144649.1 CDS SSPA3812 NC_011147.1 4276639 4277094 R PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids; part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source; Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role; aminoalkylphosphonic acid N-acetyltransferase complement(4276639..4277094) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144650.1 CDS SSPA3813 NC_011147.1 4277224 4277667 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4277224..4277667) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144651.1 CDS SSPA3814 NC_011147.1 4277787 4278122 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4277787..4278122) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144652.1 CDS SSPA3815 NC_011147.1 4278590 4280092 D similar to Salmonella typhi CT18 ProP; proline/glycine betaine transporter 4278590..4280092 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144653.1 CDS SSPA3816 NC_011147.1 4280259 4281329 R similar to Salmonella typhi Ty2 two-component sensor kinase; sensor protein BasS/PmrB complement(4280259..4281329) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144654.1 CDS SSPA3817 NC_011147.1 4281339 4282007 R response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR complement(4281339..4282007) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144655.1 CDS SSPA3818 NC_011147.1 4282004 4283647 R with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein complement(4282004..4283647) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144656.1 CDS SSPA3819 NC_011147.1 4283781 4285118 R similar to Salmonella typhi CT18 amino acid permease; arginine:agmatin antiporter complement(4283781..4285118) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144657.1 CDS SSPA3820 NC_011147.1 4285258 4286019 R similar to Salmonella typhi CT18 AraC family regulatory protein; AraC family regulatory protein complement(4285258..4286019) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144658.1 CDS SSPA3821 NC_011147.1 4286317 4288584 R similar to Salmonella typhi CT18 arginine decarboxylase; arginine decarboxylase complement(4286317..4288584) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144659.1 CDS SSPA3822 NC_011147.1 4288817 4289749 R similar to Salmonella typhi CT18 melibiose operon regulatory protein; DNA-binding transcriptional regulator MelR complement(4288817..4289749) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144660.1 CDS SSPA3823 NC_011147.1 4290021 4291373 D similar to Salmonella typhi CT18 alpha-galactosidase; alpha-galactosidase 4290021..4291373 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144661.1 CDS SSPA3824 NC_011147.1 4291457 4292887 D similar to Salmonella typhi CT18 melibiose carrier protein; melibiose:sodium symporter 4291457..4292887 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144662.1 CDS SSPA3825 NC_011147.1 4292985 4294631 R similar to Salmonella typhi CT18 fumarate hydratase class I; fumarate hydratase class I complement(4292985..4294631) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144663.1 CDS SSPA3826 NC_011147.1 4294727 4296067 R 'functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters'; anaerobic C4-dicarboxylate transporter complement(4294727..4296067) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144664.1 CDS SSPA3827 NC_011147.1 4296214 4296480 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4296214..4296480) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144665.1 CDS SSPA3828 NC_011147.1 4296797 4297516 R response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR complement(4296797..4297516) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144666.1 CDS SSPA3829 NC_011147.1 4301926 4302552 D similar to Escherichia coli K12 anaerobic dimethyl sulfoxide reductase subunit B; anaerobic dimethyl sulfoxide reductase subunit B 4301926..4302552 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144667.1 CDS SSPA3830 NC_011147.1 4302545 4303318 D similar to Salmonella typhi CT18 dimethyl sulfoxide reductase subunit C; anaerobic dimethyl sulfoxide reductase subunit C 4302545..4303318 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144668.1 CDS SSPA3831 NC_011147.1 4303300 4304004 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4303300..4304004 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144669.1 CDS SSPA3832 NC_011147.1 4304069 4305469 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(4304069..4305469) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144670.1 CDS SSPA3833 NC_011147.1 4305773 4306678 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4305773..4306678 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144671.1 CDS SSPA3834 NC_011147.1 4306966 4307280 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4306966..4307280) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144672.1 CDS SSPA3835 NC_011147.1 4307337 4307534 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4307337..4307534) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144673.1 CDS SSPA3836 NC_011147.1 4307557 4307829 R similar to Salmonella typhi CT18 GerE family regulatory protein; GerE family regulatory protein complement(4307557..4307829) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144674.1 CDS SSPA3837 NC_011147.1 4307841 4308716 R similar to Salmonella typhi CT18 araC family regulatory protein; araC family transcriptional regulator complement(4307841..4308716) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144675.1 CDS SSPA3838 NC_011147.1 4308982 4309200 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4308982..4309200) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144676.1 CDS SSPA3839 NC_011147.1 4309521 4309814 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4309521..4309814 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144677.1 CDS SSPA3840 NC_011147.1 4309811 4310302 D similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase 4309811..4310302 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144678.1 CDS SSPA3841 NC_011147.1 4310543 4311295 R similar to Salmonella typhi CT18 nonspecific acid phosphatase precursor; nonspecific acid phosphatase complement(4310543..4311295) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144679.1 CDS SSPA3842 NC_011147.1 4312196 4312771 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(4312196..4312771) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144680.1 CDS dipZ NC_011147.1 4312808 4314511 R two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein complement(4312808..4314511) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144681.1 CDS SSPA3844 NC_011147.1 4314487 4314834 R copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA complement(4314487..4314834) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144682.2 CDS SSPA3845 NC_011147.1 4314955 4316256 R functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter complement(4314955..4316256) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144683.1 CDS aspA NC_011147.1 4316371 4317807 R catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase complement(4316371..4317807) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144684.1 CDS SSPA3847 NC_011147.1 4317840 4317962 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4317840..4317962) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144685.1 CDS fxsA NC_011147.1 4318148 4318624 D F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA protein 4318148..4318624 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144686.1 CDS SSPA3849 NC_011147.1 4318683 4319897 R uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH complement(4318683..4319897) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144687.1 CDS groES NC_011147.1 4320200 4320493 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4320200..4320493 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144688.1 CDS groEL NC_011147.1 4320537 4322183 D '60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth'; chaperonin GroEL 4320537..4322183 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144689.1 CDS SSPA3852 NC_011147.1 4322409 4322780 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4322409..4322780 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144690.1 CDS SSPA3853 NC_011147.1 4322828 4323685 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4322828..4323685) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144691.1 CDS SSPA3854 NC_011147.1 4323967 4324995 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4323967..4324995) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144692.1 CDS SSPA3855 NC_011147.1 4325036 4325602 D Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 4325036..4325602 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144693.1 CDS SSPA3856 NC_011147.1 4325664 4325798 D similar to Salmonella typhi CT18 entericidin A precursor; entericidin A 4325664..4325798 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144694.1 CDS SSPA3857 NC_011147.1 4325906 4326052 D similar to Salmonella typhi CT18 entericidin B precursor; entericidin B membrane lipoprotein 4325906..4326052 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144695.1 CDS SSPA3858 NC_011147.1 4326083 4326670 R similar to Salmonella typhi CT18 transcriptional regulatory protein; transcriptional regulator complement(4326083..4326670) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144696.1 CDS SSPA3859 NC_011147.1 4326926 4327243 D 'member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations'; quaternary ammonium compound-resistance protein SugE 4326926..4327243 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144697.1 CDS SSPA3860 NC_011147.1 4327260 4327793 R lipocalin; globomycin-sensitive outer membrane lipoprotein; outer membrane lipoprotein Blc complement(4327260..4327793) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144698.1 CDS SSPA3861 NC_011147.1 4327905 4328264 R in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D complement(4327905..4328264) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144699.1 CDS SSPA3862 NC_011147.1 4328275 4328670 R 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB'; fumarate reductase subunit C complement(4328275..4328670) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144700.1 CDS SSPA3863 NC_011147.1 4328681 4329415 R 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB'; fumarate reductase iron-sulfur subunit complement(4328681..4329415) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144701.1 CDS SSPA3864 NC_011147.1 4329408 4331198 R 'part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB'; fumarate reductase flavoprotein subunit complement(4329408..4331198) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144702.1 CDS SSPA3865 NC_011147.1 4331521 4332498 D lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 4331521..4332498 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144703.1 CDS SSPA3866 NC_011147.1 4332724 4334226 D similar to Salmonella typhi CT18 amino acid permease; amino acid permease 4332724..4334226 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144704.1 CDS SSPA3867 NC_011147.1 4334234 4334611 D similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein 4334234..4334611 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144705.1 CDS psd NC_011147.1 4338093 4339061 R catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase complement(4338093..4339061) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144706.1 CDS SSPA3869 NC_011147.1 4339153 4340229 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(4339153..4340229) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144707.1 CDS SSPA3870 NC_011147.1 4340312 4340857 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 4340312..4340857 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144708.1 CDS artJ NC_011147.1 4340919 4341638 R arginine-binding periplasmic protein complement(4340919..4341638) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144709.1 CDS SSPA3872 NC_011147.1 4342512 4343651 R similar to Salmonella typhi CT18 4Fe-4S binding protein; 4Fe-4S binding protein complement(4342512..4343651) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144710.1 CDS SSPA3873 NC_011147.1 4343650 4345197 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4343650..4345197 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144711.1 CDS SSPA3874 NC_011147.1 4345172 4345630 D possibly involved in cell wall synthesis; ATPase 4345172..4345630 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144712.1 CDS SSPA3875 NC_011147.1 4345647 4346969 D similar to Salmonella typhi CT18 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-l-alanine amidase II 4345647..4346969 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144713.1 CDS mutL NC_011147.1 4346979 4348835 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4346979..4348835 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144714.1 CDS miaA NC_011147.1 4348873 4349778 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4348873..4349778 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144715.1 CDS hfq NC_011147.1 4349861 4350169 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 4349861..4350169 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144716.1 CDS SSPA3879 NC_011147.1 4350241 4351521 D involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX 4350241..4351521 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144717.1 CDS SSPA3880 NC_011147.1 4351736 4352995 D with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 4351736..4352995 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144718.1 CDS SSPA3881 NC_011147.1 4352998 4354002 D with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 4352998..4354002 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144719.1 CDS SSPA3882 NC_011147.1 4354381 4355679 D 'catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis'; adenylosuccinate synthetase 4354381..4355679 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144720.1 CDS SSPA3883 NC_011147.1 4355886 4356311 D negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 4355886..4356311 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144721.1 CDS SSPA3884 NC_011147.1 4356349 4358787 D '3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs'; exoribonuclease R 4356349..4358787 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144722.1 CDS SSPA3885 NC_011147.1 4358878 4359609 D Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 4358878..4359609 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144723.1 CDS SSPA3886 NC_011147.1 4359741 4360145 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4359741..4360145 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144724.1 CDS SSPA3887 NC_011147.1 4360160 4360858 D 'similar to Salmonella typhimurium Phage shock protein A, IM30, suppresses sigma54-dependent transcription'; phage shock protein A 4360160..4360858 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144725.1 CDS SSPA3889 NC_011147.1 4361082 4361765 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4361082..4361765 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144726.1 CDS SSPA3890 NC_011147.1 4361783 4362181 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4361783..4362181 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144727.1 CDS SSPA3891 NC_011147.1 4362191 4362829 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4362191..4362829 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144728.1 CDS SSPA3892 NC_011147.1 4362832 4363995 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4362832..4363995 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144729.1 CDS SSPA3895 NC_011147.1 4365539 4365859 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4365539..4365859) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144730.1 CDS SSPA3896 NC_011147.1 4365945 4366274 R 'in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility'; biofilm stress and motility protein A complement(4365945..4366274) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144731.1 CDS SSPA3897 NC_011147.1 4366458 4367207 D YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 4366458..4367207 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144732.1 CDS SSPA3898 NC_011147.1 4367204 4367959 R negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR complement(4367204..4367959) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144733.1 CDS SSPA3899 NC_011147.1 4368064 4369128 R similar to Salmonella typhi CT18 conserved hypothetical protein; L-ascorbate 6-phosphate lactonase complement(4368064..4369128) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144734.1 CDS ulaA NC_011147.1 4369458 4370888 D membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 4369458..4370888 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144735.1 CDS SSPA3901 NC_011147.1 4370904 4371209 D involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system L-ascorbate-specific transporter subunit IIB 4370904..4371209 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144736.1 CDS SSPA3902 NC_011147.1 4371219 4371683 D involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; PTS system L-ascorbate-specific transporter subunit IIA 4371219..4371683 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144737.1 CDS ulaD NC_011147.1 4371697 4372347 D catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 4371697..4372347 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144738.1 CDS SSPA3904 NC_011147.1 4372357 4373211 D UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway; L-xylulose 5-phosphate 3-epimerase 4372357..4373211 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144739.1 CDS sgaE NC_011147.1 4373211 4373897 D catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 4373211..4373897 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144740.1 CDS SSPA3906 NC_011147.1 4374026 4374301 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4374026..4374301) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144741.1 CDS SSPA3907 NC_011147.1 4374495 4374701 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4374495..4374701 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144742.1 CDS rpsF NC_011147.1 4374772 4375167 D 'binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21'; 30S ribosomal protein S6 4374772..4375167 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144743.1 CDS SSPA3909 NC_011147.1 4375174 4375488 D binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 4375174..4375488 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144744.1 CDS rpsR NC_011147.1 4375493 4375720 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 4375493..4375720 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144745.1 CDS rplI NC_011147.1 4375762 4376211 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 4375762..4376211 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144746.1 CDS SSPA3912 NC_011147.1 4376359 4377285 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4376359..4377285 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144747.1 CDS SSPA3913 NC_011147.1 4377335 4377970 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4377335..4377970) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144748.1 CDS SSPA3914 NC_011147.1 4378148 4378810 D FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 4378148..4378810 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144749.1 CDS SSPA3915 NC_011147.1 4379106 4380509 D 'involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine'; D-alanine/D-serine/glycine permease 4379106..4380509 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144750.1 CDS SSPA3916 NC_011147.1 4380847 4381986 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4380847..4381986 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144751.1 CDS SSPA3917 NC_011147.1 4383456 4384118 R Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein complement(4383456..4384118) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144752.1 CDS SSPA3918 NC_011147.1 4384221 4385186 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4384221..4385186) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144753.1 CDS SSPA3919 NC_011147.1 4385267 4386115 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4385267..4386115) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144754.1 CDS SSPA3920 NC_011147.1 4386203 4386589 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4386203..4386589 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144755.1 CDS cpdB NC_011147.1 4386647 4388590 R 'periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate'; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein complement(4386647..4388590) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144756.1 CDS SSPA3922 NC_011147.1 4388857 4389597 D 'catalyzes the formation of AMP from adenosine-3',5'-bisphosphate'; adenosine-3'(2'),5'-bisphosphate nucleotidase 4388857..4389597 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144757.1 CDS SSPA3923 NC_011147.1 4389587 4390144 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(4389587..4390144) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144758.1 CDS SSPA3924 NC_011147.1 4390405 4390677 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4390405..4390677 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144759.1 CDS SSPA3925 NC_011147.1 4390820 4391278 R similar to Salmonella typhi Ty2 transposase for insertion sequence element IS200; insertion sequence element IS200 transposase complement(4390820..4391278) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144760.1 CDS SSPA3926 NC_011147.1 4391476 4392819 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4391476..4392819) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144761.1 CDS SSPA3927 NC_011147.1 4393009 4393647 R this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A complement(4393009..4393647) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144762.1 CDS SSPA3928 NC_011147.1 4393860 4395593 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4393860..4395593 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144763.1 CDS SSPA3929 NC_011147.1 4395590 4399369 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4395590..4399369 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144764.1 CDS SSPA3930 NC_011147.1 4399372 4399716 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4399372..4399716 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144765.1 CDS SSPA3931 NC_011147.1 4399770 4400978 R similar to Salmonella typhi CT18 sugar transporter; sugar transporter complement(4399770..4400978) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144766.1 CDS SSPA3932 NC_011147.1 4400975 4402135 R similar to Salmonella typhi CT18 hypothetical protein; metallo-dependent hydrolase complement(4400975..4402135) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144767.1 CDS SSPA3933 NC_011147.1 4402548 4403078 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(4402548..4403078) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144768.1 CDS SSPA3934 NC_011147.1 4403305 4404303 R 'catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate'; fructose-1,6-bisphosphatase complement(4403305..4404303) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144769.1 CDS SSPA3935 NC_011147.1 4406388 4406939 R similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein complement(4406388..4406939) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144770.1 CDS SSPA3936 NC_011147.1 4407035 4408387 D protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 4407035..4408387 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144771.1 CDS SSPA3937 NC_011147.1 4408485 4408871 D similar to Salmonella typhi CT18 soluble cytochrome b562; soluble cytochrome b562 4408485..4408871 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144772.1 CDS SSPA3938 NC_011147.1 4409149 4409487 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4409149..4409487 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144773.1 CDS SSPA3939 NC_011147.1 4409498 4409860 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4409498..4409860 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144774.1 CDS SSPA3940 NC_011147.1 4409863 4410162 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4409863..4410162 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144775.1 CDS SSPA3941 NC_011147.1 4410185 4410961 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4410185..4410961 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144776.1 CDS SSPA3942 NC_011147.1 4410973 4411617 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4410973..4411617 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144777.1 CDS SSPA3943 NC_011147.1 4411676 4412809 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 4411676..4412809 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144778.1 CDS SSPA3944 NC_011147.1 4412793 4413911 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4412793..4413911 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144779.1 CDS SSPA3945 NC_011147.1 4413908 4414648 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4413908..4414648 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144780.2 CDS SSPA3946 NC_011147.1 4414665 4416578 D similar to Salmonella typhi CT18 BglB-family transcriptional antiterminator; BglB-family transcriptional antiterminator 4414665..4416578 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144781.1 CDS SSPA3947 NC_011147.1 4416656 4416898 D Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor; bifunctional antitoxin/transcriptional repressor RelB 4416656..4416898 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144782.1 CDS SSPA3948 NC_011147.1 4416888 4417172 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4416888..4417172 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144783.1 CDS nrdG NC_011147.1 4417176 4417640 R activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein complement(4417176..4417640) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144784.1 CDS SSPA3950 NC_011147.1 4417857 4419995 R Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase complement(4417857..4419995) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144785.1 CDS SSPA3951 NC_011147.1 4420200 4420370 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4420200..4420370 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144786.1 CDS SSPA3952 NC_011147.1 4420404 4422056 R similar to Salmonella typhi CT18 trehalose-6-phosphate hydrolase; trehalose-6-phosphate hydrolase complement(4420404..4422056) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144787.1 CDS SSPA3953 NC_011147.1 4422106 4423524 R phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC complement(4422106..4423524) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144788.1 CDS treR NC_011147.1 4423662 4424609 R regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; trehalose repressor complement(4423662..4424609) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144789.1 CDS SSPA3955 NC_011147.1 4427817 4428263 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4427817..4428263) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144790.1 CDS SSPA3956 NC_011147.1 4428338 4428724 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4428338..4428724) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144791.1 CDS SSPA3957 NC_011147.1 4428801 4429262 R involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase regulatory subunit complement(4428801..4429262) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144792.1 CDS pyrB NC_011147.1 4429275 4430210 R catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit complement(4429275..4430210) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144793.1 CDS SSPA3959 NC_011147.1 4430246 4430347 R similar to Salmonella typhi CT18 pyrBI operon leader peptide; pyrBI operon leader peptide complement(4430246..4430347) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144794.1 CDS SSPA3960 NC_011147.1 4430438 4430926 R similar to Salmonella typhi CT18 transcriptional regulator; transcriptional regulator complement(4430438..4430926) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144795.1 CDS SSPA3961 NC_011147.1 4431113 4432513 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4431113..4432513) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144796.1 CDS SSPA3962 NC_011147.1 4432569 4433573 R catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; ornithine carbamoyltransferase complement(4432569..4433573) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144797.1 CDS SSPA3963 NC_011147.1 4433685 4434617 R reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase complement(4433685..4434617) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144798.1 CDS SSPA3964 NC_011147.1 4434628 4435848 R catalyzes the degradation of arginine to citruline and ammonia; arginine deiminase complement(4434628..4435848) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144799.1 CDS SSPA3965 NC_011147.1 4436523 4436975 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4436523..4436975 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144800.1 CDS SSPA3966 NC_011147.1 4437050 4438054 R 'catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.'; ornithine carbamoyltransferase subunit I complement(4437050..4438054) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144801.1 CDS SSPA3967 NC_011147.1 4438220 4438636 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4438220..4438636 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144802.1 CDS SSPA3968 NC_011147.1 4438648 4439460 D similar to Salmonella typhi CT18 tRNA hydroxylase; tRNA hydroxylase 4438648..4439460 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144803.1 CDS SSPA3969 NC_011147.1 4439470 4439616 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4439470..4439616) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144804.1 CDS SSPA3970 NC_011147.1 4439695 4440183 R similar to Salmonella typhi CT18 exported protein; hypothetical protein complement(4439695..4440183) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144805.1 CDS SSPA3971 NC_011147.1 4440290 4440805 R similar to Salmonella typhi CT18 acetyltransferase; acetyltransferase complement(4440290..4440805) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144806.1 CDS SSPA3972 NC_011147.1 4440988 4442175 D similar to Salmonella typhi CT18 innner membrane protein; innner membrane protein 4440988..4442175 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144807.1 CDS valS NC_011147.1 4442317 4445172 R valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase complement(4442317..4445172) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144808.1 CDS SSPA3974 NC_011147.1 4445172 4445654 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(4445172..4445654) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144809.1 CDS SSPA3975 NC_011147.1 4445752 4447263 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(4445752..4447263) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144810.1 CDS SSPA3976 NC_011147.1 4447658 4448758 D similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 4447658..4448758 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144811.1 CDS SSPA3977 NC_011147.1 4448758 4449840 D similar to Salmonella typhi CT18 inner membrane protein; inner membrane protein 4448758..4449840 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144812.1 CDS SSPA3978 NC_011147.1 4449993 4450991 R similar to Salmonella typhi CT18 regulatory protein; regulatory protein complement(4449993..4450991) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144813.1 CDS SSPA3979 NC_011147.1 4451055 4452374 R 'similar to Salmonella typhimurium GntP family,L-idonate transport protein'; GntP family, L-idonate transport protein complement(4451055..4452374) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144814.1 CDS SSPA3980 NC_011147.1 4452436 4453200 R 'Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate'; gluconate 5-dehydrogenase complement(4452436..4453200) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144815.1 CDS SSPA3981 NC_011147.1 4453225 4454256 R NAD-binding; L-idonate 5-dehydrogenase complement(4453225..4454256) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144816.1 CDS idnK NC_011147.1 4454473 4455003 D 'similar to Salmonella typhimurium D-gluconate kinase, thermosensitive'; D-gluconate kinase 4454473..4455003 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144817.1 CDS SSPA3983 NC_011147.1 4455031 4456050 R similar to Salmonella typhimurium alcohol dehydrogenase; alcohol dehydrogenase complement(4455031..4456050) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144818.1 CDS SSPA3984 NC_011147.1 4456521 4457780 D similar to Salmonella typhi CT18 integrase; integrase 4456521..4457780 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144819.1 CDS SSPA3985 NC_011147.1 4457834 4458829 R similar to |11995224|ref|NP_072082.1| PvuIIM [Proteus vulgaris]; DNA methyltransferase SptAIM complement(4457834..4458829) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144820.1 CDS SSPA3986 NC_011147.1 4458885 4459121 D similar to |11995223|ref|NP_072081.1| PvuIIC [Proteus vulgaris]; subunit S of type I restriction-modification system 4458885..4459121 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144821.1 CDS SSPA3987 NC_011147.1 4459118 4459681 D similar to |22135358|gb|AAM93163.1| restriction endonuclease SbaIR [Salmonella enterica]; subunit R of type I restriction-modification system 4459118..4459681 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144822.1 CDS SSPA3988 NC_011147.1 4459901 4460467 R similar to |6318609|gb|AAF06966.1| P4 psu-like protein [Escherichia coli]; hypothetical protein complement(4459901..4460467) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144823.1 CDS SSPA3989 NC_011147.1 4460484 4460729 R similar to |93826|pir||E42465 probable transcription activator delta - phage phi-R73; hypothetical protein complement(4460484..4460729) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144955.1 CDS SSPA3989a NC_011147.1 4460726 4461463 R hypothetical protein complement(4460726..4461463) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_008144956.1 CDS SSPA3989b NC_011147.1 4462001 4462267 D hypothetical protein 4462001..4462267 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144824.1 CDS SSPA3990 NC_011147.1 4462444 4462815 D similar to Salmonella typhi CT18 phage immunity repressor protein; phage immunity repressor protein 4462444..4462815 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144825.1 CDS SSPA3991 NC_011147.1 4462812 4463039 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4462812..4463039 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144826.1 CDS SSPA3992 NC_011147.1 4463036 4463356 D similar to Salmonella typhi CT18 hypothetical P4 phage protein; hypothetical protein 4463036..4463356 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144827.1 CDS SSPA3993 NC_011147.1 4463371 4465704 D similar to Salmonella typhi Ty2 hypothetical protein; hypothetical protein 4463371..4465704 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144828.1 CDS SSPA3994 NC_011147.1 4465972 4466121 D hypothetical protein 4465972..4466121 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144829.1 CDS SSPA3995 NC_011147.1 4466257 4466415 D similar to |14252927|emb|CAC39282.1| integrase [Escherichia coli]; hypothetical protein 4466257..4466415 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144830.1 CDS SSPA3996 NC_011147.1 4467934 4468431 D similar to |153860|gb|AAA71892.1| fimbrial structural protein; fimbrial structural protein 4467934..4468431 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144831.1 CDS SSPA3997 NC_011147.1 4468553 4469305 D similar to Salmonella typhi CT18 fimbrial chaperone protein; fimbrial chaperone protein 4468553..4469305 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144832.1 CDS SSPA3998 NC_011147.1 4469310 4471754 D similar to Salmonella typhi CT18 outer membrane fimbrial usher protein; outer membrane fimbrial usher protein 4469310..4471754 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144834.1 CDS SSPA4000 NC_011147.1 4473816 4474166 D similar to Salmonella typhi Ty2 GerE-family regulatory protein; GerE-family regulatory protein 4473816..4474166 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144835.1 CDS SSPA4001 NC_011147.1 4474398 4475063 D similar to |19071798|gb|AAL80007.1| thiol:disulfide oxidoreductase Dle [Salmonella enteritidis]; hypothetical protein 4474398..4475063 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144836.1 CDS SSPA4002 NC_011147.1 4475250 4476089 D similar to Salmonella typhi CT18 outer membrane protein; outer membrane protein 4475250..4476089 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144837.1 CDS SSPA4003 NC_011147.1 4476352 4476618 D similar to |16082776|ref|NP_395222.1| transposase [Yersinia pestis CO92]; hypothetical protein 4476352..4476618 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144838.1 CDS SSPA4004 NC_011147.1 4476699 4477376 D similar to |38639745|ref|NP_943514.1| transposase [Klebsiella pneumoniae]; hypothetical protein 4476699..4477376 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144839.1 CDS SSPA4005 NC_011147.1 4477563 4483883 R 'similar to Escherichia coli K12 orf, hypothetical protein'; hypothetical protein complement(4477563..4483883) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144840.1 CDS SSPA4006 NC_011147.1 4483896 4487195 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4483896..4487195) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144841.1 CDS SSPA4007 NC_011147.1 4487459 4487698 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4487459..4487698 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144842.1 CDS SSPA4008 NC_011147.1 4487776 4488651 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4487776..4488651 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144843.1 CDS SSPA4009 NC_011147.1 4489020 4490228 R IS10 transposase complement(4489020..4490228) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144844.1 CDS SSPA4010 NC_011147.1 4490469 4491194 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4490469..4491194) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144845.1 CDS SSPA4011 NC_011147.1 4491596 4493221 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4491596..4493221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144846.1 CDS SSPA4012 NC_011147.1 4493232 4493489 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4493232..4493489) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144847.1 CDS SSPA4013 NC_011147.1 4493978 4494586 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4493978..4494586 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144848.1 CDS SSPA4014 NC_011147.1 4494962 4495873 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4494962..4495873 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144849.1 CDS SSPA4015 NC_011147.1 4496078 4496539 D similar to Salmonella typhi CT18 exported protein; hypothetical protein 4496078..4496539 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144850.1 CDS SSPA4016 NC_011147.1 4496556 4497221 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4496556..4497221) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144851.1 CDS SSPA4017 NC_011147.1 4497571 4498344 D regulates the expression of uxuBA; DNA-binding transcriptional repressor UxuR 4497571..4498344 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144852.1 CDS SSPA4018 NC_011147.1 4498345 4499358 R 'catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA'; tryptophanyl-tRNA synthetase II complement(4498345..4499358) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144853.1 CDS SSPA4019 NC_011147.1 4499655 4499807 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4499655..4499807 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144854.1 CDS SSPA4020 NC_011147.1 4500076 4500606 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4500076..4500606 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144855.1 CDS SSPA4021 NC_011147.1 4500845 4501579 D similar to Salmonella typhi CT18 probable aspartate racemase; aspartate racemase 4500845..4501579 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144856.1 CDS SSPA4022 NC_011147.1 4501585 4502493 R similar to Salmonella typhi CT18 probable transcriptional activator; DNA-binding transcriptional regulator complement(4501585..4502493) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144857.1 CDS SSPA4023 NC_011147.1 4502612 4503784 R similar to Salmonella typhi CT18 probable isoaspartyl dipeptidase; isoaspartyl dipeptidase complement(4502612..4503784) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144858.1 CDS SSPA4024 NC_011147.1 4503797 4504258 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4503797..4504258) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144859.1 CDS SSPA4025 NC_011147.1 4504255 4505139 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4504255..4505139) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144860.1 CDS SSPA4026 NC_011147.1 4505283 4505657 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4505283..4505657) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144861.1 CDS SSPA4027 NC_011147.1 4505797 4506981 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4505797..4506981) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144862.1 CDS SSPA4028 NC_011147.1 4507201 4508517 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4507201..4508517) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144863.1 CDS SSPA4029 NC_011147.1 4510279 4511244 D similar to Salmonella typhi CT18 membrane protein; hypothetical protein 4510279..4511244 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144864.1 CDS SSPA4030 NC_011147.1 4511425 4512795 D similar to |23037247|ref|ZP_00069459.1| COG1012: NAD-dependent aldehyde dehydrogenases [Oenococcus oeni MCW]; hypothetical protein 4511425..4512795 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144865.1 CDS SSPA4031 NC_011147.1 4512890 4513033 R similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein complement(4512890..4513033) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144866.1 CDS SSPA4032 NC_011147.1 4513239 4513940 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4513239..4513940) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144867.1 CDS SSPA4033 NC_011147.1 4514014 4514409 R involved in the degradation of RNA; may be involved in the recycling of RNA during the SOS response; endoribonuclease SymE complement(4514014..4514409) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144868.1 CDS SSPA4034 NC_011147.1 4514574 4515962 R specificity determinant for hsdM and hsdR; EcoKI restriction-modification system protein HsdS complement(4514574..4515962) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144869.1 CDS SSPA4035 NC_011147.1 4515959 4517545 R 'similar to Salmonella typhimurium DNA methylase M,host modification'; DNA methylase M complement(4515959..4517545) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144870.1 CDS hsdR NC_011147.1 4517703 4521212 R restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities; type I restriction enzyme EcoKI subunit R complement(4517703..4521212) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144871.1 CDS SSPA4037 NC_011147.1 4521410 4522324 D similar to Salmonella typhi CT18 mrr restriction system protein; mrr restriction system protein 4521410..4522324 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144872.1 CDS SSPA4038 NC_011147.1 4522577 4522864 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4522577..4522864 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144873.1 CDS SSPA4039 NC_011147.1 4522851 4523153 D similar to Salmonella typhi CT18 hypothetical protein; hypothetical protein 4522851..4523153 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144874.1 CDS SSPA4040 NC_011147.1 4523228 4524184 R similar to Salmonella typhi CT18 conserved hypothetical protein; GTP-binding protein YjiA complement(4523228..4524184) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144875.1 CDS SSPA4041 NC_011147.1 4524195 4524398 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4524195..4524398) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144876.1 CDS SSPA4042 NC_011147.1 4524493 4526643 R similar to Salmonella typhi Ty2 probable carbon starvation protein; carbon starvation protein A complement(4524493..4526643) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144877.1 CDS SSPA4043 NC_011147.1 4527010 4528671 D 'similar to Salmonella typhimurium methyl-accepting chemotaxis protein I, serine sensor receptor'; methyl-accepting chemotaxis protein I, serine sensor receptor 4527010..4528671 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144878.2 CDS SSPA4044 NC_011147.1 4528836 4531127 R catalyzes the transfer of phosphoglycerol to the glucan backbone; phosphoglycerol transferase I complement(4528836..4531127) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144879.1 CDS SSPA4045 NC_011147.1 4531410 4531871 R similar to Salmonella typhi CT18 secreted protein; hypothetical protein complement(4531410..4531871) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144880.1 CDS SSPA4046 NC_011147.1 4531929 4532666 R acts to load the DnaB helicase onto the initiation site during DNA replication; DNA replication protein DnaC complement(4531929..4532666) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144881.1 CDS SSPA4047 NC_011147.1 4532669 4533208 R 'This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N''; primosomal protein DnaI complement(4532669..4533208) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144882.1 CDS SSPA4048 NC_011147.1 4533301 4533774 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4533301..4533774) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144883.1 CDS SSPA4049 NC_011147.1 4533765 4534676 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4533765..4534676) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144884.1 CDS SSPA4050 NC_011147.1 4535254 4535979 D similar to Salmonella typhi CT18 conserved hypothetical regulatory protein; hypothetical protein 4535254..4535979 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144885.1 CDS SSPA4051 NC_011147.1 4535991 4536614 D regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin; DNA-binding transcriptional activator BglJ 4535991..4536614 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144886.1 CDS SSPA4052 NC_011147.1 4536665 4537123 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4536665..4537123) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144887.1 CDS SSPA4053 NC_011147.1 4537274 4538062 R similar to Salmonella typhi CT18 ferric iron reductase protein; ferric hydroximate transport ferric iron reductase complement(4537274..4538062) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144888.1 CDS SSPA4054 NC_011147.1 4538183 4539247 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4538183..4539247) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144889.1 CDS SSPA4055 NC_011147.1 4539498 4539734 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4539498..4539734 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144890.1 CDS rsmC NC_011147.1 4540275 4541303 R 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase complement(4540275..4541303) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144891.1 CDS SSPA4057 NC_011147.1 4541406 4541843 D with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 4541406..4541843 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144892.1 CDS rimI NC_011147.1 4541788 4542234 D alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 4541788..4542234 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144893.1 CDS SSPA4059 NC_011147.1 4542253 4542933 D 'manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily'; nucleotidase 4542253..4542933 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144894.1 CDS prfC NC_011147.1 4543025 4544614 D stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 4543025..4544614 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144895.1 CDS SSPA4061 NC_011147.1 4545016 4545633 D similar to Salmonella typhi CT18 periplasmic protein; hypothetical protein 4545016..4545633 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144896.1 CDS SSPA4062 NC_011147.1 4546047 4547120 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4546047..4547120 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144897.1 CDS SSPA4063 NC_011147.1 4547117 4547890 D similar to Salmonella typhi CT18 conserved hypothetical protein; deoxyribonuclease YjjV 4547117..4547890 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144898.1 CDS SSPA4064 NC_011147.1 4547923 4548786 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4547923..4548786) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144899.1 CDS SSPA4065 NC_011147.1 4548758 4550308 R similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein complement(4548758..4550308) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144900.1 CDS SSPA4066 NC_011147.1 4550550 4551347 D catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 4550550..4551347 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144901.1 CDS deoA NC_011147.1 4551474 4552796 D 'Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate'; thymidine phosphorylase 4551474..4552796 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144902.1 CDS SSPA4068 NC_011147.1 4552848 4554071 D catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 4552848..4554071 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144903.1 CDS deoD NC_011147.1 4554281 4555000 D catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 4554281..4555000 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144904.1 CDS SSPA4070 NC_011147.1 4555207 4555698 D similar to Salmonella typhi Ty2 conserved hypothetical protein; hypothetical protein 4555207..4555698 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144905.1 CDS lplA NC_011147.1 4555783 4556799 R Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; lipoate-protein ligase A complement(4555783..4556799) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144906.1 CDS SSPA4072 NC_011147.1 4556833 4557477 R similar to Salmonella typhi CT18 membrane protein; hypothetical protein complement(4556833..4557477) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144907.1 CDS serB NC_011147.1 4557594 4558562 D catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 4557594..4558562 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144908.1 CDS SSPA4074 NC_011147.1 4558646 4560028 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 4558646..4560028 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144909.1 CDS SSPA4075 NC_011147.1 4560152 4561411 D catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 4560152..4561411 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144910.1 CDS SSPA4076 NC_011147.1 4561529 4563196 R 'ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence'; ABC transporter ATP-binding protein complement(4561529..4563196) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144911.1 CDS SSPA4077 NC_011147.1 4563459 4565342 D catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 4563459..4565342 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144912.1 CDS SSPA4078 NC_011147.1 4565400 4565726 D When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 4565400..4565726 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144913.1 CDS SSPA4079 NC_011147.1 4565828 4566343 R pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase complement(4565828..4566343) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144914.1 CDS SSPA4080 NC_011147.1 4566392 4567039 D catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 4566392..4567039 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144915.1 CDS SSPA4081 NC_011147.1 4567036 4567905 R similar to Salmonella typhi CT18 right origin-binding protein; right origin-binding protein complement(4567036..4567905) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144916.1 CDS SSPA4082 NC_011147.1 4568117 4568590 D similar to Salmonella typhi CT18 conserved hypothetical protein; hypothetical protein 4568117..4568590 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144917.1 CDS SSPA4083 NC_011147.1 4568603 4569292 D response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; DNA-binding response regulator CreB 4568603..4569292 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144918.2 CDS SSPA4084 NC_011147.1 4569292 4570716 D part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; sensory histidine kinase CreC 4569292..4570716 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144919.1 CDS SSPA4085 NC_011147.1 4570774 4572123 D similar to Salmonella typhi CT18 inner membrane protein CreD; hypothetical protein 4570774..4572123 Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144920.1 CDS SSPA4086 NC_011147.1 4572181 4573266 R similar to Salmonella typhimurium major fimbrial subunit; major fimbrial subunit complement(4572181..4573266) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144921.1 CDS SSPA4087 NC_011147.1 4573307 4573864 R similar to Salmonella typhi CT18 fimbrial subunit; fimbrial subunit complement(4573307..4573864) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144922.1 CDS SSPA4088 NC_011147.1 4573882 4576419 R similar to Salmonella typhimurium fimbrial usher protein; fimbrial usher protein complement(4573882..4576419) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144923.1 CDS SSPA4089 NC_011147.1 4576465 4577148 R similar to Salmonella typhi Ty2 fimbrial chaperone protein; fimbrial chaperone protein complement(4576465..4577148) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144924.1 CDS SSPA4090 NC_011147.1 4577219 4577764 R similar to Salmonella typhi CT18 fimbrial protein; fimbrial protein complement(4577219..4577764) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144925.1 CDS SSPA4091 NC_011147.1 4578098 4578769 R similar to Salmonella typhi CT18 transcriptional regulator protein; transcriptional regulator complement(4578098..4578769) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144926.1 CDS SSPA4092 NC_011147.1 4579735 4580451 R similar to Salmonella typhi CT18 global response regulator; two-component response regulator complement(4579735..4580451) Salmonella enterica subsp. enterica serovar Paratyphi A str. YP_002144927.1 CDS SSPA4093 NC_011147.1 4581087 4581773 D member of the SPOUT superfamily of methyltransferases; RNA methyltransferase 4581087..4581773 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt001 tRNA ileV NC_011147.1 294972 295045 D tRNA-Ile 294972..295045 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt002 tRNA alaV NC_011147.1 295158 295230 D tRNA-Ala 295158..295230 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt003 tRNA lysV NC_011147.1 511085 511157 R tRNA-Lys complement(511085..511157) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt004 tRNA valY NC_011147.1 511165 511237 R tRNA-Val complement(511165..511237) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt005 tRNA valX NC_011147.1 511282 511354 R tRNA-Val complement(511282..511354) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt006 tRNA valU NC_011147.1 511403 511475 R tRNA-Val complement(511403..511475) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt007 tRNA alaX NC_011147.1 514181 514253 D tRNA-Ala 514181..514253 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt008 tRNA SSPAt008 NC_011147.1 943767 943839 R tRNA-Asn complement(943767..943839) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt009 tRNA SSPAt009 NC_011147.1 945597 945669 D tRNA-Asn 945597..945669 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt010 tRNA SSPAt010 NC_011147.1 949032 949104 R tRNA-Asn complement(949032..949104) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt011 tRNA asnT NC_011147.1 949655 949727 R tRNA-Asn complement(949655..949727) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt012 tRNA serU NC_011147.1 950714 950800 D tRNA-Ser 950714..950800 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt013 tRNA tyrT NC_011147.1 1183223 1183304 R tRNA-Tyr complement(1183223..1183304) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt014 tRNA tyrT NC_011147.1 1183342 1183423 R tRNA-Tyr complement(1183342..1183423) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt015 tRNA SSPAt015 NC_011147.1 1505669 1505742 D tRNA-Val 1505669..1505742 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt016 tRNA SSPAt016 NC_011147.1 1505756 1505829 D tRNA-Val 1505756..1505829 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt017 tRNA SSPAt017 NC_011147.1 1648325 1648398 R tRNA-Arg complement(1648325..1648398) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt018 tRNA SSPAt018 NC_011147.1 1658562 1658635 R tRNA-Arg complement(1658562..1658635) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt019 tRNA serX NC_011147.1 1769231 1769315 D tRNA-Ser 1769231..1769315 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt020 tRNA serT NC_011147.1 1818101 1818185 R tRNA-Ser complement(1818101..1818185) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt021 tRNA SSPAt021 NC_011147.1 1920189 1920273 D tRNA-Ser 1920189..1920273 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt022 tRNA SSPAt022 NC_011147.1 2066133 2066205 R tRNA-Lys complement(2066133..2066205) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt023 tRNA SSPAt023 NC_011147.1 2066344 2066416 R tRNA-Lys complement(2066344..2066416) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt024 tRNA SSPAt024 NC_011147.1 2066562 2066634 R tRNA-Lys complement(2066562..2066634) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt025 tRNA SSPAt025 NC_011147.1 2066641 2066713 R tRNA-Val complement(2066641..2066713) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt026 tRNA SSPAt026 NC_011147.1 2066853 2066925 R tRNA-Lys complement(2066853..2066925) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt027 tRNA metU NC_011147.1 2147225 2147298 D tRNA-Met 2147225..2147298 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt028 tRNA leuW NC_011147.1 2147312 2147393 D tRNA-Leu 2147312..2147393 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt029 tRNA glnW NC_011147.1 2147420 2147491 D tRNA-Gln 2147420..2147491 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt030 tRNA glnW NC_011147.1 2147530 2147601 D tRNA-Gln 2147530..2147601 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt031 tRNA metU NC_011147.1 2147620 2147693 D tRNA-Met 2147620..2147693 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt032 tRNA glnX NC_011147.1 2147743 2147814 D tRNA-Gln 2147743..2147814 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt033 tRNA glnX NC_011147.1 2147861 2147932 D tRNA-Gln 2147861..2147932 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt034 tRNA SSPAt034 NC_011147.1 2256120 2256193 R tRNA-Arg complement(2256120..2256193) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt035 tRNA SSPAt035 NC_011147.1 2523136 2523208 R tRNA-Thr complement(2523136..2523208) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt036 tRNA SSPAt036 NC_011147.1 2600222 2600295 R tRNA-Asp complement(2600222..2600295) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt037 tRNA SSPAt037 NC_011147.1 2609662 2609735 R tRNA-Asp complement(2609662..2609735) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt038 tRNA SSPAt038 NC_011147.1 2613343 2613415 R tRNA-Glu complement(2613343..2613415) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt039 tRNA SSPAt039 NC_011147.1 2781159 2781232 R tRNA-Arg complement(2781159..2781232) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt040 tRNA SSPAt040 NC_011147.1 2781298 2781371 R tRNA-Arg complement(2781298..2781371) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt041 tRNA SSPAt041 NC_011147.1 2781436 2781509 R tRNA-Arg complement(2781436..2781509) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt042 tRNA SSPAt042 NC_011147.1 2781516 2781605 R tRNA-Ser complement(2781516..2781605) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt043 tRNA metZ NC_011147.1 2954353 2954426 D tRNA-Met 2954353..2954426 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt044 tRNA metZ NC_011147.1 2954459 2954532 D tRNA-Met 2954459..2954532 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt045 tRNA glyU NC_011147.1 3010719 3010789 R tRNA-Gly complement(3010719..3010789) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt046 tRNA pheV NC_011147.1 3081179 3081251 D tRNA-Phe 3081179..3081251 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt047 tRNA ileX NC_011147.1 3185136 3185208 D tRNA-Met 3185136..3185208 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt048 tRNA SSPAt048 NC_011147.1 3262936 3263009 R tRNA-Met complement(3262936..3263009) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt049 tRNA leuU NC_011147.1 3264897 3264980 R tRNA-Leu complement(3264897..3264980) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt050 tRNA SSPAt050 NC_011147.1 3368969 3369041 R tRNA-Thr complement(3368969..3369041) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt051 tRNA SSPAt051 NC_011147.1 3372371 3372443 R tRNA-Glu complement(3372371..3372443) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt052 tRNA proK NC_011147.1 3609709 3609782 R tRNA-Pro complement(3609709..3609782) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt053 tRNA selC NC_011147.1 3732084 3732174 D tRNA-Sec 3732084..3732174 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt054 tRNA SSPAt054 NC_011147.1 3872459 3872531 D tRNA-Glu 3872459..3872531 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt055 tRNA aspT NC_011147.1 3875899 3875972 D tRNA-Asp 3875899..3875972 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt056 tRNA trpT NC_011147.1 3875984 3876056 D tRNA-Trp 3875984..3876056 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt057 tRNA argX NC_011147.1 3914796 3914869 D tRNA-Arg 3914796..3914869 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt058 tRNA hisR NC_011147.1 3914927 3914999 D tRNA-His 3914927..3914999 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt059 tRNA leuT NC_011147.1 3915023 3915106 D tRNA-Leu 3915023..3915106 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt060 tRNA proM NC_011147.1 3915152 3915225 D tRNA-Pro 3915152..3915225 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt061 tRNA ileT NC_011147.1 3971583 3971656 D tRNA-Ile 3971583..3971656 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt062 tRNA alaT NC_011147.1 3971769 3971841 D tRNA-Ala 3971769..3971841 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt063 tRNA ileU NC_011147.1 4122177 4122250 D tRNA-Ile 4122177..4122250 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt064 tRNA alaU NC_011147.1 4122363 4122435 D tRNA-Ala 4122363..4122435 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt065 tRNA thrU NC_011147.1 4129362 4129434 D tRNA-Thr 4129362..4129434 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt066 tRNA tyrU NC_011147.1 4129446 4129527 D tRNA-Tyr 4129446..4129527 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt067 tRNA glyT NC_011147.1 4129647 4129718 D tRNA-Gly 4129647..4129718 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt068 tRNA thrT NC_011147.1 4129728 4129800 D tRNA-Thr 4129728..4129800 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt069 tRNA SSPAt069 NC_011147.1 4164297 4164369 D tRNA-Glu 4164297..4164369 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt070 tRNA SSPAt070 NC_011147.1 4312008 4312080 R tRNA-Phe complement(4312008..4312080) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt071 tRNA SSPAt071 NC_011147.1 4341935 4342007 D tRNA-Gly 4341935..4342007 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt072 tRNA glyW NC_011147.1 4342167 4342239 D tRNA-Gly 4342167..4342239 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt073 tRNA leuX NC_011147.1 4456273 4456354 D tRNA-Leu 4456273..4456354 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt074 tRNA leuT NC_011147.1 4539769 4539852 R tRNA-Leu complement(4539769..4539852) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt075 tRNA leuT NC_011147.1 4539887 4539970 R tRNA-Leu complement(4539887..4539970) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAt076 tRNA leuT NC_011147.1 4540001 4540084 R tRNA-Leu complement(4540001..4540084) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr001 rRNA rrsH NC_011147.1 293362 294907 D 16S ribosomal RNA 293362..294907 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr002 rRNA rrlH NC_011147.1 295417 298320 D 23S ribosomal RNA 295417..298320 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr003 rRNA rrfH NC_011147.1 298416 298537 D 5S ribosomal RNA 298416..298537 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr004 rRNA rrfG NC_011147.1 2609922 2610044 R 5S ribosomal RNA complement(2609922..2610044) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr005 rRNA rrlG NC_011147.1 2610239 2613146 R 23S ribosomal RNA complement(2610239..2613146) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr006 rRNA rrsG NC_011147.1 2613498 2615042 R 16S ribosomal RNA complement(2613498..2615042) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr007 rRNA rrfF NC_011147.1 3368809 3368928 R 5S ribosomal RNA complement(3368809..3368928) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr008 rRNA rrfD NC_011147.1 3369054 3369173 R 5S ribosomal RNA complement(3369054..3369173) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr009 rRNA rrlD NC_011147.1 3369266 3372173 R 23S ribosomal RNA complement(3369266..3372173) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr010 rRNA rrsD NC_011147.1 3372529 3374070 R 16S ribosomal RNA complement(3372529..3374070) Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr011 rRNA rrsC NC_011147.1 3870832 3872373 D 16S ribosomal RNA 3870832..3872373 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr012 rRNA rrlC NC_011147.1 3872728 3875635 D 23S ribosomal RNA 3872728..3875635 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr013 rRNA rrfC NC_011147.1 3875727 3875844 D 5S ribosomal RNA 3875727..3875844 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr014 rRNA rrsA NC_011147.1 3969972 3971513 D 16S ribosomal RNA 3969972..3971513 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr015 rRNA rrlA NC_011147.1 3972027 3974934 D 23S ribosomal RNA 3972027..3974934 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr016 rRNA rrfA NC_011147.1 3975026 3975145 D 5S ribosomal RNA 3975026..3975145 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr017 rRNA rrsB NC_011147.1 4120566 4122107 D 16S ribosomal RNA 4120566..4122107 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr018 rRNA rrlF NC_011147.1 4122621 4125529 D 23S ribosomal RNA 4122621..4125529 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr019 rRNA rrfB NC_011147.1 4125622 4125741 D 5S ribosomal RNA 4125622..4125741 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr020 rRNA rrsE NC_011147.1 4162670 4164211 D 16S ribosomal RNA 4162670..4164211 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr021 rRNA rrlE NC_011147.1 4164566 4167475 D 23S ribosomal RNA 4164566..4167475 Salmonella enterica subsp. enterica serovar Paratyphi A str. SSPAr022 rRNA rrfE NC_011147.1 4167566 4167685 D 5S ribosomal RNA 4167566..4167685 Salmonella enterica subsp. enterica serovar Paratyphi A str.