-- dump date   	20140620_054247
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_010102.1	PROVISIONAL REFSEQ: This record has not yet been subject to finalPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for itPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strainsPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, bothPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella ParatyphiPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminatedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diversePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to-PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food bornePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolatedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtainedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella GeneticPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmidPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  AutomatedPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continuePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  ThePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID),PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 andPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark andPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) databasePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genesPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequencePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions werePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or coveredPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data(i.e., phred quality >=30);an attempt was madePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data(i.e., phred quality >=30);an attempt was made to resolve all sequencing problems, such as compressions andPROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data(i.e., phred quality >=30);an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than onePROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data(i.e., phred quality >=30);an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone.PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from CP000886. The bacterium Salmonella Paratyphi B is host-specialized, for it grows well and causes disease only in humans, whereas most strains of Salmonella can grow in the gut of almost all animals, both domesticated and wild. Humans usually acquire Salmonella Paratyphi B by the ingestion of water or of food that has been contaminated through fecal contact with humans.  Paratyphi B is quite diverse and human infection is sometimes not associated with human-to- human system infection but rather associated with food borne infection. The specific strain of S. Paratyphi that was sequenced was isolated from the stool of a female in Penang Malaysia, and was obtained from Kwai-Lin Thong. It can be obtained from the Salmonella Genetic Stock Center as SGSC4150 (www.ucalgary.ca/ kesander). The genome was sequenced to 8X coverage, using plasmid and fosmid libraries, and was manually finished.  Automated annotation has been performed and manual annotation will continue in the labs of Michael McClelland and Kenneth Sanderson.  The National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH) has funded this project. Coding sequences below are predicted using GeneMark v3.3 and Glimmer2  v2.13.Intergenic regions not spanned by GeneMark and Glimmer2 were blasted against NCBI's non-redundant (NR) database and predictions generated based on protein alignments. RNA genes were determined  using tRNAscan-SE 1.23 or Rfam v8.0. This sequence was finished as follows unless otherwise noted: all regions were double stranded, sequenced with an alternate chemistries or covered by high quality data(i.e., phred quality >=30);an attempt was made to resolve all sequencing problems, such as compressions and repeats; all regions were covered by sequence from more than one m13 subclone. COMPLETENESS: full length.