-- dump date   	20140620_055651
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_005250569.1	similar to Escherichia coli thr operon leader peptide (AAC73112.1)
YP_005250570.1	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_005250571.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_005250572.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_005250574.1	similar to Escherichia coli inner membrane transport protein (AAC73118.1); AGCS family
YP_005250575.1	Maintains the balance of metabolites in the pentose-phosphate pathway
YP_005250576.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
YP_005250578.1	similar to Escherichia coli putative oxidoreductase (AAC73122.1); regulator for sigma H promoters/sigma 32 promoters permitting growth at high temperature
YP_005250580.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_005250581.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_005250582.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73704.1); LysR family
YP_005250585.1	similar to Escherichia coli putative sensory transducer (AAC75886.1)
YP_005250589.1	fimbrial subunit (gi|4959511)
YP_005250590.1	fimbrial chaperone (gi|4959512)
YP_005250591.1	bovine colonization factor BcfC (gi|4530570)
YP_005250592.1	fimbrial subunit (gi|4959514)
YP_005250593.1	fimbrial subunit (gi|4959515)
YP_005250594.1	fimbrial subunit (gi|4959516)
YP_005250595.1	fimbrial chaperone (gi|4959517)
YP_005250597.1	similar to hypothetical protein STM0028.1n (Pid: NP_945153.1).
YP_005250598.1	putative transcriptional regulator MarT (gi|4324612)
YP_005250599.1	similar to LeuO (gi|6650098); LysR family
YP_005250600.1	putative transcriptional regulator MarT (gi|4324612)
YP_005250602.1	similar to Escherichia coli UDP-sugar hydrolase (5'-nucleotidase) (AAC73582.1)
YP_005250603.1	similar to Escherichia coli putative sugar hydrolase (AAC75461.1)
YP_005250604.1	similar to Escherichia coli putative sulfatase (AAC76701.1)
YP_005250605.1	similar to Escherichia coli putative arylsulfatase regulator (AAC76803.1)
YP_005250608.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
YP_005250609.1	Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC
YP_005250611.1	similar to Escherichia coli putative permease (AAC76681.1)
YP_005250612.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_005250614.1	catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities
YP_005250615.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine
YP_005250616.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_005250617.1	similar to Escherichia coli FKBX-type 16KD peptidyl-prolyl cis-trans isomerase; rotamase (AAC73139.1)
YP_005250618.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_005250620.1	catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides
YP_005250621.1	similar to Escherichia coli sequence similarity to Shigella regulator (AAC73721.1); sensor for citrate
YP_005250622.1	similar to Escherichia coli putative sensor-type protein (AAC73720.1); histidine kinase for citrate
YP_005250623.1	oxaloacetate decarboxylase beta chain (SW:DCOB_SALTY)
YP_005250624.1	catalyzes the formation of pyruvate from oxaloacetate
YP_005250625.1	catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide
YP_005250627.1	similar to Escherichia coli citrate lyase synthetase; citrate (pro-3S)-lyase ligase (AAC73719.1)
YP_005250628.1	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate
YP_005250629.1	similar to Escherichia coli citrate lyase beta chain; acyl lyase subunit (AAC73717.1)
YP_005250630.1	similar to Escherichia coli citrate lyase alpha chain (AAC73716.1)
YP_005250632.1	putative modifier of citrate lyase protein
YP_005250633.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_005250635.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_005250636.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_005250637.1	regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons
YP_005250638.1	involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities
YP_005250639.1	catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA
YP_005250640.1	similar to Escherichia coli probable crotonobetaine/carnitine-CoA ligase (AAC73148.1)
YP_005250641.1	catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine
YP_005250642.1	catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA
YP_005250643.1	catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism
YP_005250644.1	required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase
YP_005250645.1	involved in electron transfer during carnitine metabolism
YP_005250646.1	FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction
YP_005250647.1	similar to Escherichia coli putative ferredoxin (AAC73155.1); carnitine metabolism
YP_005250648.1	similar to Escherichia coli putative transport protein (AAC73156.1); MFS family
YP_005250653.1	similar to Escherichia coli putative sulfatase (AAC76701.1)
YP_005250654.1	Required for full activity of KefC, a potassium-proton antiporter
YP_005250655.1	transport system that facilitates potassium-efflux
YP_005250656.1	catalyzes the reduction of dihydrofolate to tetrahydrofolate
YP_005250657.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_005250658.1	protein associated with Co2+ and Mg2+ efflux
YP_005250659.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_005250660.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_005250661.1	Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB
YP_005250662.1	determines N-hexane tolerance and is involved in outer membrane permeability
YP_005250663.1	functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid
YP_005250664.1	catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs
YP_005250665.1	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on
YP_005250666.1	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C
YP_005250670.1	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
YP_005250671.1	catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism
YP_005250672.1	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate
YP_005250673.1	positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose
YP_005250674.1	DedA family
YP_005250675.1	with TbpA and ThiP is part of the thiamine and TPP transport system
YP_005250676.1	permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine
YP_005250677.1	part of the thiamine and TPP transport system tbpA-thiPQ
YP_005250678.1	activates sgrS under glucose-phosphate stress conditions
YP_005250679.1	similar to hypothetical protein SC0104 (Pid: YP_215091.1).
YP_005250680.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_005250681.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_005250682.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_005250683.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_005250684.1	involved in attenuation control of the leuABCD operon in leucine biosynthesis
YP_005250685.1	activator for leuABCD operon; member of LysR family of transcriptional activators
YP_005250686.1	catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive
YP_005250687.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity
YP_005250688.1	binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism
YP_005250689.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_005250690.1	similar to Escherichia coli putative apolipoprotein (AAC73193.1)
YP_005250691.1	membrane bound cell division protein at septum containing leucine zipper motif
YP_005250692.1	similar to Escherichia coli septum formation; penicillin-binding protein 3; peptidoglycan synthetase (AAC73195.1)
YP_005250693.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_005250694.1	similar to Escherichia coli D-alanine-D-alanine-adding enzyme (AAC73197.1)
YP_005250695.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_005250696.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_005250697.1	integral membrane protein involved in stabilizing FstZ ring during cell division
YP_005250698.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_005250699.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_005250700.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_005250701.1	involved in septum formation
YP_005250702.1	ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane
YP_005250703.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_005250704.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_005250705.1	secM translational pause allows for the initiation of secA translation
YP_005250706.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis ap
YP_005250707.1	similar to Escherichia coli 7,8-dihydro-8-oxoguanine-triphosphatase; prefers dGTP; causes AT-GC transversions (AAC73210.1)
YP_005250710.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_005250711.1	catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate
YP_005250712.1	similar to Escherichia coli putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake (AAC73217.1)
YP_005250713.1	similar to Escherichia coli putative integral membrane protein involved in biogenesis of fimbriae, protein transport, DNA uptake (AAC73218.1)
YP_005250714.1	similar to Escherichia coli prepilin peptidase dependent protein (AAC73219.1)
YP_005250715.1	catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide
YP_005250716.1	AMPD protein (SW:AMPD_SALTY)
YP_005250717.1	involved in regulation of beta-lactamase; putative signaling protein
YP_005250720.1	similar to Escherichia coli aromatic amino acid transport protein (AAC73223.1); APC family
YP_005250721.1	activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex
YP_005250722.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_005250723.1	E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains
YP_005250724.1	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_005250727.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_005250730.1	transports degraded pectin products into the bacterial cell
YP_005250732.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_005250733.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC75777.1); LysR family
YP_005250734.1	S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine
YP_005250735.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_005250737.1	laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification
YP_005250738.1	similar to Escherichia coli glucose dehydrogenase (AAC73235.1)
YP_005250739.1	Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively
YP_005250740.1	catalyzes the interconversion of bicarbonate and carbon dioxide
YP_005250741.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC73238.1)
YP_005250742.1	putative ABC superfamily membrane protein
YP_005250743.1	LpfD protein precursor (SW:LPFD_SALTY)
YP_005250744.1	similar to Escherichia coli putative outer membrane protein (AAC76178.1)
YP_005250745.1	similar to Escherichia coli periplasmic chaperone, required for type 1 fimbriae (AAC77272.1)
YP_005250746.1	similar to Escherichia coli major type 1 subunit fimbrin; pilin (AAC77270.1)
YP_005250747.1	similar to Escherichia coli putative PTS enzyme II B component (AAC73240.1)
YP_005250749.1	Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5)
YP_005250750.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_005250751.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_005250752.1	catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP
YP_005250753.1	Polymerase that creates the 3' poly(A) tail found in some mRNA's
YP_005250754.1	this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the
YP_005250755.1	dnaK suppressor protein (SW:DKSA_SALTY); suppresses dnaK deletion
YP_005250756.1	Regulatory factor involved in maltose metabolism
YP_005250758.1	similar in sequence to the ATP-dependent RNA helicase HrpA
YP_005250759.1	bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while
YP_005250760.1	involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein
YP_005250761.1	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter
YP_005250762.1	Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores
YP_005250763.1	part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome
YP_005250764.1	major fimbrial subunit StfA (gi|3747029)
YP_005250765.1	outer membrane usher protein StfC (gi|3747030)
YP_005250766.1	periplasmic fimbrial chaperone StfD (gi|3747031)
YP_005250767.1	minor fimbrial subunit StfE (gi|3747032)
YP_005250768.1	minor fimbrial subunit StfF (gi|3747033)
YP_005250769.1	minor fimbrial subunit StfG (gi|3747034); putative adhesin
YP_005250770.1	hypothetical 30.2 da protein in stfG 3'region precursor (SW:YADU_SALTY)
YP_005250771.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_005250772.1	Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation
YP_005250773.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_005250775.1	solute binding component of the vitamin B12 transport system BtuCDF
YP_005250776.1	enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine
YP_005250777.1	forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate
YP_005250778.1	protease Do; required at high temperature; degrades damaged proteins
YP_005250779.1	regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization
YP_005250780.1	similar to Escherichia coli putative structural protein (AAC73274.1)
YP_005250781.1	similar to Escherichia coli putative transport protein; shikimate (AAC75045.1)
YP_005250782.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_005250783.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_005250784.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_005250785.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_005250786.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_005250787.1	Catalyzes the phosphorylation of UMP to UDP
YP_005250788.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release fact
YP_005250789.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_005250790.1	catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate
YP_005250791.1	catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate
YP_005250792.1	catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response
YP_005250793.1	part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins
YP_005250794.1	(SW:OMPH_SALTY); histone-like protein
YP_005250795.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_005250796.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_005250797.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_005250798.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_005250799.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_005250800.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_005250801.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein
YP_005250803.1	similar to Escherichia coli lysine decarboxylase 2; constitutive (AAC73297.1)
YP_005250805.1	Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition
YP_005250806.1	Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination
YP_005250808.1	hypothetical 20.8 kDa protein in mesJ-cutF intergenic region (SW:YAEQ_SALTY)
YP_005250809.1	putative-tRNA hydrolase domain
YP_005250810.1	similar to copper homeostasis protein CutF (Pid: YP_002039481.1).
YP_005250811.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_005250813.1	similar to Escherichia coli regulator in colanic acid synthesis; interacts with RcsB (AAC73307.1); overexpression confers mucoid phenotype, increases capsule synthesis
YP_005250814.1	similar to Escherichia coli putative lipoprotein (AAC73308.1)
YP_005250815.1	part of the MetNIQ methionine uptake system
YP_005250816.1	part of the metNIQ transport system for methionine
YP_005250817.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_005250818.1	catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid
YP_005250819.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73313.1); LysR family
YP_005250820.1	similar to Escherichia coli putative transport protein (AAC74729.1); putatively for chloramphenicol
YP_005250822.1	similar to Escherichia coli putative biotin synthesis protein (AAC73315.1); involved in menaquinone/biotin biosynthesis
YP_005250823.1	catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transgl
YP_005250824.1	catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione
YP_005250826.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_005250827.1	3'-5' exonuclease of DNA polymerase III
YP_005250834.1	similar to Escherichia coli ATP-binding component of serine protease (AAC73969.1); similar to Yersinia clpB
YP_005250845.1	similar to Escherichia coli putative outer membrane protein (AAC76576.1); OmpA family
YP_005250854.1	similar to Escherichia coli RhsD protein in rhs element (AAC73599.1); similar to STM0292
YP_005250855.1	similar to hypothetical protein plu3111 (Pid: NP_930343.1).
YP_005250856.1	similar to Escherichia coli rhsE protein in rhs element (AAC74538.1); similar to C-terminus of STM0291
YP_005250858.1	similar to hypothetical protein SNSL254_A0323 (Pid: YP_002039530.1).
YP_005250860.1	similar to hypothetical protein STM0294.1N (Pid: NP_945154.1).
YP_005250864.1	similar to E. coli orf, hypothetical protein(AAC73370.1); Blastp hit to AAC73370.1 (384 aa)
YP_005250866.1	similar to Escherichia coli putative chaperone (AAC76177.1)
YP_005250867.1	similar to Escherichia coli putative outer membrane protein; export function (AAC73634.1)
YP_005250870.1	SinR protein (SW:SINR_SALTY)
YP_005250873.1	similar to Shigella VirG protein
YP_005250874.1	similar to Escherichia coli putative amidase-type enzyme (AAC73323.1)
YP_005250875.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_005250876.1	catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate
YP_005250877.1	similar to Escherichia coli putative amidotransferase (AAC73327.1)
YP_005250879.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_005250882.1	similar to release factor 1 and 2
YP_005250883.1	similar to Escherichia coli aminoacyl-histidine dipeptidase; peptidase D (AAC73341.1)
YP_005250884.1	catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively
YP_005250885.1	forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation
YP_005250886.1	involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS
YP_005250887.1	outer membrane pore protein E precursor (SW:PHOE_SALTY)
YP_005250888.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_005250889.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_005250891.1	similar to Escherichia coli IS3 putative transposase (AAC75150.1); contains a premature stop codon
YP_005250893.1	similar to Escherichia coli putative transport protein (AAC74668.1)
YP_005250894.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_005250895.1	similar to Escherichia coli 3-isopropylmalate isomerase subunit (AAC73182.1); dehydratase; subunit with LeuC
YP_005250896.1	similar to Escherichia coli putative isomerase (AAC74264.1); FAA
YP_005250898.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74869.1); LysR family
YP_005250901.1	similar to Escherichia coli periplasmic chaperone; required for type 1 fimbriae (AAC77272.1)
YP_005250903.1	similar to Escherichia coli outer membrane protein; export and assembly of type 1 fimbriae; interrupted (AAC77273.1)
YP_005250904.1	similar to Escherichia coli probable pilin chaperone PapD (AAC73251.1)
YP_005250905.1	similar to Escherichia coli major type 1 subunit fimbrin; pilin (AAC77270.1)
YP_005250908.1	putative diguanylate cyclase/phosphodiesterase domain 1
YP_005250911.1	similar to ail and ompX
YP_005250915.1	similar to Escherichia coli putative resistance protein (AAC73673.1)
YP_005250916.1	similar to Escherichia coli integral transmembrane protein; acridine resistance (AAC76298.1)
YP_005250917.1	similar to Escherichia coli acridine efflux pump (AAC73565.1)
YP_005250918.1	similar to Escherichia coli putative ATPase (AAC73586.1)
YP_005250919.1	similar to Escherichia coli putative transcriptional regulator (AAC73589.1)
YP_005250921.1	similar to Escherichia coli putative transport protein (AAC77235.1)
YP_005250922.1	type III restriction-modification system; methyltransferase (SW:T3MO_SALTY); restriction system
YP_005250923.1	type III restriction-modification system enzyme (SW:T3RE_SALTY); DNA helicase
YP_005250925.1	similar to Escherichia coli probable third cytochrome oxidase, subunit I (AAC74063.1)
YP_005250926.1	similar to Escherichia coli cytochrome d terminal oxidase polypeptide subunit II (AAC73828.1)
YP_005250928.1	putative XylS/AraC transcriptional activator (gi|3094022); AraC family
YP_005250929.1	ferrioxamine B receptor precursor (SW:FOXA_SALTY)
YP_005250930.1	similar to Escherichia coli putative cytochrome subunit of dehydrogenase (AAC73431.1)
YP_005250932.1	propionate catabolism operon regulatory protein (SW:PRPR_SALTY); EBP family
YP_005250933.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
YP_005250934.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
YP_005250935.1	functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C
YP_005250936.1	catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed
YP_005250937.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_005250938.1	similar to Escherichia coli putative flagellin structural protein (AAC73477.1); similar to 3rd module of ATP-binding components of transporters
YP_005250940.1	this protein has no known enzymatic function
YP_005250941.1	in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope
YP_005250945.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_005250947.1	similar to Escherichia coli putative transport protein (AAC74137.1)
YP_005250949.1	similar to Escherichia coli protein induced by phosphate starvation (AAC73487.1)
YP_005250950.1	catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynt
YP_005250951.1	catalyzes the formation of L-proline from pyrroline-5-carboxylate
YP_005250953.1	type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_005250955.1	similar to Escherichia coli protein of aro operon; regulated by aroR (AAC73493.1)
YP_005250957.1	Required for efficient pilin antigenic variation
YP_005250958.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_005250959.1	member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers
YP_005250960.1	with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity
YP_005250961.1	with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity
YP_005250962.1	two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB
YP_005250963.1	membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB
YP_005250964.1	branched-chain amino acid transport system II carrier protein (SW:BRNQ_SALTY); LIVCS family; LIV-II
YP_005250965.1	cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation
YP_005250966.1	similar to Escherichia coli maltodextrin glucosidase (AAC73506.1)
YP_005250967.1	similar to Escherichia coli alkyl hydroperoxide reductase C22 subunit; detoxification of hydroperoxides (AAC73706.1)
YP_005250968.1	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
YP_005250969.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_005250970.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_005250971.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
YP_005250972.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of
YP_005250973.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins f
YP_005250976.1	hypothetical 12.6 kDa protein in secF-tsx intergenic region (SW:YAJD_SALTY)
YP_005250977.1	hypothetical protein 14.5K (gi|1073681)
YP_005250978.1	nucleoside-specific channel-forming protein TSX precursor (SW:TSX_SALTY); receptor of phage T6 and colicin K
YP_005250981.1	riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine a
YP_005250982.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl
YP_005250983.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_005250984.1	catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP
YP_005250985.1	hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate
YP_005250986.1	similar to Escherichia coli putative NAD(P)H-dependent xylose reductase (AAC73522.1); K+ channel protein
YP_005250987.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_005250988.1	similar to Escherichia coli geranyltranstransferase; farnesyldiphosphate synthase (AAC73524.1)
YP_005250989.1	catalyzes the bidirectional exonucleolytic cleavage of DNA
YP_005250990.1	Required for the synthesis of the thiazole moiety
YP_005250991.1	probable membrane component of 2-aminoethylphosphonate transporter PhnV (gi|11354255)
YP_005250992.1	probable membrane component of 2-aminoethylphosphonate transporter PhnU (gi|11354254)
YP_005250993.1	probable ATPase component of 2-aminoethylphosphonate transporter PhnT (gi|11354253)
YP_005250994.1	probable periplasmic binding-protein of the2-aminoethylphosphonate transporter phnS (gi|11354256)
YP_005250995.1	probable repressor protein of GntR family PhnR (gi|11354257)
YP_005250996.1	catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate
YP_005250997.1	catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate
YP_005250998.1	4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (SW:THIJ_SALTY)
YP_005250999.1	ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis
YP_005251000.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in ac
YP_005251001.1	similar to Escherichia coli putative transport protein (AAC73530.1); MFS family
YP_005251004.1	TPR repeat
YP_005251005.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_005251006.1	similar to Escherichia coli cytochrome o ubiquinol oxidase subunit IV (AAC73532.1)
YP_005251007.1	similar to Escherichia coli cytochrome o ubiquinol oxidase subunit III (AAC73533.1)
YP_005251008.1	similar to Escherichia coli cytochrome o ubiquinol oxidase subunit I (AAC73534.1)
YP_005251009.1	similar to Escherichia coli cytochrome o ubiquinol oxidase subunit II (AAC73535.1)
YP_005251010.1	in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein
YP_005251011.1	similar to Escherichia coli putative polymerase/proteinase (AAC73537.1)
YP_005251012.1	positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress
YP_005251013.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_005251014.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_005251015.1	binds and unfolds substrates as part of the ClpXP protease
YP_005251016.1	similar to Escherichia coli ATP-dependent protease La; heat shock K-protein (AAC73542.1); cleaves RcsA and SulA; heat shock K-protein; DNA binding activity
YP_005251017.1	histone-like DNA-binding protein
YP_005251018.1	similar to Escherichia coli putative protease maturation protein (AAC73544.1)
YP_005251019.1	similar to DNA-binding proteins
YP_005251021.1	YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and H
YP_005251024.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005251025.1	similar to Escherichia coli cysteine synthase B; O-acetylserine sulfhydrolase B (AAC75474.1)
YP_005251026.1	similar to Escherichia coli putative LRP-like transcriptional regulator (AAC73550.1); AsnC family
YP_005251027.1	similar to Escherichia coli ATP-binding component of a transport system (AAC73551.1); putative ABC superfamily transporter
YP_005251028.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC73552.1); putative ABC superfamily
YP_005251029.1	indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interac
YP_005251030.1	similar to Escherichia coli probable ammonium transporter (AAC73554.1); Amt family
YP_005251031.1	similar to Escherichia coli acyl-CoA thioesterase II (AAC73555.1)
YP_005251032.1	similar to Escherichia coli glycoprotein/polysaccharide metabolism (AAC73556.1)
YP_005251034.1	putative diguanylate cyclase/phosphodiesterase domain 2
YP_005251035.1	RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially g
YP_005251036.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc io
YP_005251038.1	similar to Escherichia coli putative transferase (AAC73561.1)
YP_005251039.1	with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins
YP_005251041.1	similar to Escherichia coli acridine efflux pump (AAC73564.1); RND family
YP_005251042.1	similar to Escherichia coli acridine efflux pump (AAC73565.1)
YP_005251043.1	regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine
YP_005251044.1	small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS
YP_005251047.1	PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulat
YP_005251048.1	similar to Escherichia coli putative gene 58 (AAC73570.1)
YP_005251049.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_005251050.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to
YP_005251052.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_005251053.1	molecular chaperone
YP_005251054.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_005251055.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_005251056.1	similar to Escherichia coli putative lipase (AAC73578.1)
YP_005251057.1	similar to Escherichia coli inosine-guanosine kinase (AAC73579.1)
YP_005251058.1	YbaL; member of the CPA-2 family of antiporters; uncharacterized protein
YP_005251059.1	similar to Escherichia coli fosmidomycin resistance protein (AAC73581.1); MFS family
YP_005251060.1	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides
YP_005251061.1	protein YbaK (SW:YBAK_SALTY)
YP_005251062.1	similar to Escherichia coli putative ligase (AAC73584.1)
YP_005251064.1	similar to Escherichia coli putative ATPase (AAC73586.1)
YP_005251065.1	activator of copper-responsive regulon genes
YP_005251066.1	implicated in regulation of membrane protease activity
YP_005251067.1	similar to Escherichia coli putative protease (AAC73591.1)
YP_005251068.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC73592.1)
YP_005251069.1	similar to Escherichia coli putative metal resistance protein (AAC73593.1); YbbM family
YP_005251070.1	similar to Escherichia coli putative thioredoxin-like protein (AAC73594.1)
YP_005251071.1	similar to Escherichia coli putative oxidoreductase (AAC73595.1)
YP_005251072.1	similar to Escherichia coli acyl-CoA thioesterase I; also functions as protease I (AAC73596.1); lysophospholipaseL(I)
YP_005251073.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC73597.1); putative ABC superfamily ATP-binding protein
YP_005251074.1	similar to Escherichia coli putative oxidoreductase (AAC73598.1)
YP_005251076.1	similar to Escherichia coli putative lipoprotein (AAC73308.1); cell division protein
YP_005251077.1	similar to Escherichia coli ATP-binding component of a transporter (AAC73310.1); cell division protein
YP_005251078.1	similar to Escherichia coli putative transport system permease protein (AAC73309.1); binding-protein-dependent
YP_005251079.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_005251080.1	activator of the allDC-ylbA operon involved in allantoin utilization
YP_005251081.1	catalyzes the formation of glyoxylate from (S)-ureidoglycolate
YP_005251082.1	regulates operons involved in the utilization of allantoin
YP_005251083.1	catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate
YP_005251084.1	similar to Escherichia coli glyoxylate-induced protein (AAC73610.1)
YP_005251085.1	similar to Escherichia coli putative oxidoreductase (AAC73611.1)
YP_005251086.1	similar to Escherichia coli putative transport protein; cryptic; joins former yjiZ and yjjL (AAC77312.1)
YP_005251088.1	similar to Escherichia coli putative transport protein (AAC73613.1); NCS1 family
YP_005251089.1	Plays a crucial role on both purine and pyrimidine metabolism
YP_005251090.1	similar to Escherichia coli putative transport (AAC73615.1)
YP_005251093.1	allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidogl
YP_005251094.1	similar to Escherichia coli putative malate dehydrogenase (AAC73619.1)
YP_005251095.1	multicopy suppressor of dominant negative ftsH mutations
YP_005251097.1	similar to Escherichia coli putative carboxylase (AAC73622.1)
YP_005251098.1	forms a homodimer; may be used to synthesize carbomyl phosphate from ATP and carbamate
YP_005251099.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_005251100.1	Catalyzes a step in the de novo purine nucleotide biosynthetic pathway
YP_005251101.1	catalyzes the formation of 2,3
YP_005251102.1	similar to Escherichia coli peptidyl-prolyl cis-trans isomerase B; rotamase B (AAC73627.1)
YP_005251103.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_005251108.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_005251109.1	type-1 fimbrial protein; A chain precursor; type-1A pilin (SW:FM1A_SALTY); major type 1 subunit
YP_005251110.1	fimbrin-like protein FimI (SW:FIMI_SALTY)
YP_005251111.1	chaperone protein FimC precursor (SW:FIMC_SALTY); required for type 1 fimbriae
YP_005251112.1	outer membrane usher protein FimD precursor (SW:FIMD_SALTY)
YP_005251113.1	FIMH protein precursor (SW:FIMH_SALTY)
YP_005251114.1	fimbrial-like protein FimF precursor (SW:FIMF_SALTY)
YP_005251115.1	activates the production of the major fimbrae protein FimA
YP_005251116.1	fimbriae Y protein (SW:FIMY_SALTY)
YP_005251117.1	putative diguanylate cyclase/phosphodiesterase domain 0
YP_005251118.1	fimbriae W protein (SW:FIMW_SALTY)
YP_005251119.1	similar to Escherichia coli prophage DLP12 integrase (AAC73638.1)
YP_005251122.1	similar to Escherichia coli putative glycan biosynthesis enzyme (AAC75410.1)
YP_005251123.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_005251124.1	similar to Escherichia coli putative 2-component sensor protein (AAC73671.1)
YP_005251125.1	similar to E. coli putative inner membranecomponent for iron transport (AAC73676.1); Blastp hit toAAC73676.1 (1047 aa)
YP_005251126.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC73408.1); AraC/XylS family
YP_005251127.1	Involved in disulfide oxidoreductase activity and electron transport
YP_005251131.1	similar to Escherichia coli phenylalanine-specific transport system (AAC73677.1); APC family
YP_005251132.1	similar to Escherichia coli putative transport (AAC73678.1)
YP_005251133.1	outer membrane esterase (gi|2896133); N-acetyl phenylalanine beta-naphthyl esterase
YP_005251135.1	similar to Escherichia coli putative transport protein (AAC76396.1)
YP_005251136.1	similar to Escherichia coli L-glutamine/D-fructose-6-phosphate aminotransferase (AAC76752.1)
YP_005251137.1	similar to Escherichia coli PTS enzyme IID; mannose-specific (AAC74889.1)
YP_005251138.1	similar to Escherichia coli PTS enzyme IIC; mannose-specific (AAC74888.1)
YP_005251139.1	similar to Escherichia coli PTS enzyme IIAB, mannose-specific (AAC74887.1)
YP_005251140.1	similar to Escherichia coli PTS enzyme IIAB; mannose-specific (AAC74887.1)
YP_005251141.1	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive
YP_005251144.1	resistance against oxidative stress protein A (gi|9885772)
YP_005251146.1	ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity
YP_005251147.1	similar to Escherichia coli enterochelin synthetase component D (AAC73684.1); phoshpantetheinyltransferase
YP_005251148.1	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space
YP_005251149.1	similar to Escherichia coli enterochelin esterase (AAC73686.1)
YP_005251151.1	with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin
YP_005251152.1	part of the ferric enterobactin transport system; necessary for enetrobactin uptake
YP_005251153.1	with FepBDE is involved in the transport of ferric enterobactin
YP_005251154.1	with FepBCD is involved in the transport of ferric enterobactin
YP_005251155.1	with FepBCG is involved in the transport of ferric enterobactin
YP_005251156.1	protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters
YP_005251157.1	with FepCDG is involved in the transport of ferric enterobactin
YP_005251158.1	synthesizes isochorismate acid from chorismate
YP_005251159.1	bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate
YP_005251160.1	similar to Escherichia coli 2,3-dihydro-2,3-dihydroxybenzoate synthetase; isochroismatase (AAC73696.1)
YP_005251161.1	catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin
YP_005251162.1	possibly involved in aromatic compounds catabolism; PaaI
YP_005251163.1	similar to Escherichia coli carbon starvation protein (AAC73699.1)
YP_005251165.1	member of the iron-containing alcohol dehydrogenase family; unknown function
YP_005251166.1	catalyzes the transfer of an amino moiety
YP_005251168.1	PAPS reductase/FAD synthetase
YP_005251169.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73704.1); LysR family
YP_005251170.1	Involved in disulfide bond formation
YP_005251171.1	with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate
YP_005251172.1	alkyl hydroperoxide reductase subunit F (SW:AHPF_SALTY); detoxification of hydroperoxides
YP_005251173.1	similar to Escherichia coli putative oxidoreductase component (AAC74663.1)
YP_005251174.1	similar to Escherichia coli putative oxidoreductase; major subunit (AAC74659.1)
YP_005251175.1	similar to Escherichia coli putative DMSO reductase anchor subunit (AAC74662.1)
YP_005251176.1	similar to UspA and related nucleotide-binding protein
YP_005251177.1	similar to Escherichia coli putative oxidoreductase (AAC73709.1)
YP_005251178.1	Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation
YP_005251179.1	similar to Escherichia coli RNase I; cleaves phosphodiester bond between any two nucleotides (AAC73712.1)
YP_005251180.1	similar to Escherichia coli putative membrane protein (AAC73713.1); DASS family
YP_005251181.1	catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA
YP_005251182.1	2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate
YP_005251183.1	similar to Escherichia coli citrate lyase alpha chain (AAC73716.1)
YP_005251184.1	similar to Escherichia coli citrate lyase beta chain; acyl lyase subunit (AAC73717.1)
YP_005251185.1	acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate
YP_005251186.1	similar to Escherichia coli citrate lyase synthetase; citrate (pro-3S)-lyase ligase (AAC73719.1)
YP_005251187.1	similar to Escherichia coli putative sensor-type protein (AAC73720.1); in two-component regulatory system with DpiA; regulation of cit operon and plasmid inheritance genes
YP_005251188.1	regulates the expression of citAB in citrate fermentation
YP_005251189.1	responsible for the transport of C4-dicarboxylates during anaerobic growth
YP_005251190.1	catalyzes the transfer of palmitate to lipid A
YP_005251191.1	member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator
YP_005251192.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_005251193.1	similar to Escherichia coli putative amidase (AAC73727.1)
YP_005251194.1	TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a
YP_005251195.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_005251196.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73730.1); LysR family
YP_005251197.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_005251199.1	penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors
YP_005251200.1	similar to Escherichia coli minor lipoprotein (AAC73734.1)
YP_005251201.1	similar to Escherichia coli rod shape-determining membrane protein; sensitivity to radiation and drugs (AAC73735.1); cell elongation in exponential phase
YP_005251202.1	similar to Escherichia coli cell elongation e phase protein; peptidoglycan synthetase; penicillin-binding protein 2 (AAC73736.1)
YP_005251203.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_005251204.1	similar to putative ACR plant Iojap protein
YP_005251205.1	alpha-ribazole-5'-phosphate phosphatase (SW:COBC_SALTY); cobalamin synthesis
YP_005251206.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_005251207.1	transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria
YP_005251208.1	required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA
YP_005251209.1	rare lipoprotein B; involved in the assembly of LPS in the outer membrane
YP_005251210.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl
YP_005251211.1	similar to Escherichia coli altronate hydrolase N-terminus (AAC76126.1)
YP_005251212.1	similar to Escherichia coli putative hydrolase C-terminus (AAC76162.1)
YP_005251213.1	transports degraded pectin products into the bacterial cell
YP_005251214.1	similar to Escherichia coli response regulator of ato; ornithine decarboxylase antizyme; sensor ATOS (AAC75280.1)
YP_005251215.1	similar to Escherichia coli putative alpha helical protein (AAC73744.1)
YP_005251216.1	TPR repeat
YP_005251218.1	similar to Escherichia coli putative enzyme of polynucleotide modification (AAC73747.1); DnaJ family
YP_005251219.1	DnaJ family
YP_005251220.1	similar to Escherichia coli putative DnaK protein (AAC73751.1); similar to Hsp70 in Hsc66 subfamily
YP_005251222.1	Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific
YP_005251223.1	similar to Escherichia coli ATP-binding protein of glutamate/aspartate transport system (AAC73753.1); ABC superfamily ATP-binding protein
YP_005251224.1	similar to Escherichia coli glutamate/aspartate transport system permease (AAC73754.1); ABC superfamily membrane protein
YP_005251225.1	similar to Escherichia coli glutamate/aspartate transport system permease (AAC73755.1); ABC superfamily membrane protein
YP_005251226.1	similar to Escherichia coli putative periplasmic binding transport protein (AAC73756.1); ABC superfamily binding protein
YP_005251227.1	Transfers the fatty acyl group on membrane lipoproteins
YP_005251228.1	similar to Escherichia coli putative transport protein (AAC73759.1); contains putative CBS domain
YP_005251229.1	hypothetical protein in cutE-corC intergenic region (SW:YBEY_SALTY)
YP_005251230.1	similar to Escherichia coli putative ATP-binding protein in pho regulon (AAC73761.1)
YP_005251231.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_005251232.1	catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q
YP_005251234.1	functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP
YP_005251235.1	similar to Escherichia coli N-acetylglucosamine metabolism (AAC73769.1)
YP_005251236.1	similar to Escherichia coli transcriptional repressor of nag; N-acetylglucosamine operon (AAC73770.1); NagC/XylR family
YP_005251237.1	catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate
YP_005251238.1	catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate
YP_005251239.1	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group t
YP_005251240.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_005251243.1	citrate-proton symporter (citrate transporter). (SW:CIT1_SALTY)
YP_005251244.1	citrate utilization protein B (SW:CIT2_SALTY)
YP_005251245.1	catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica
YP_005251246.1	similar to Escherichia coli nitrogen assimilation control protein (AAC75050.1); LysR family
YP_005251247.1	negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer
YP_005251248.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_005251250.1	negative modulator of the initiation of chromosome replication
YP_005251251.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_005251253.1	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system
YP_005251254.1	similar to Escherichia coli ornithine decarboxylase isozyme; inducible (AAC73787.1)
YP_005251255.1	similar to hypothetical protein SeHA_C0823 (Pid: YP_002044733.1).
YP_005251256.1	response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport
YP_005251257.1	sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein
YP_005251258.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
YP_005251259.1	One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_005251260.1	catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_005251261.1	one of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
YP_005251263.1	UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent
YP_005251264.1	similar to Escherichia coli putative transport protein (AAC73803.1)
YP_005251266.1	similar to Escherichia coli putative carboxylase (AAC73805.1)
YP_005251267.1	similar to Escherichia coli putative carboxylase (AAC73806.1)
YP_005251268.1	similar to Escherichia coli putative lactam utilization protein (AAC73807.1)
YP_005251270.1	similar to Escherichia coli recombinase involved in phase variation; regulator for fimA (AAC77268.1)
YP_005251273.1	similar to Escherichia coli UDP-galactopyranose mutase (AAC75097.1)
YP_005251275.1	similar to Escherichia coli putative colanic acid biosynthesis glycosyl transferase (AAC75105.1)
YP_005251277.1	similar to Escherichia coli ATP-binding component of putrescine transport system (AAC73942.1)
YP_005251278.1	cell wall biogenesis
YP_005251279.1	cell wall biogenesis
YP_005251282.1	5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has ap
YP_005251283.1	similar to Escherichia coli putative transport protein (AAC73809.1)
YP_005251284.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexa
YP_005251286.1	similar to Escherichia coli succinate dehydrogenase; cytochrome b556 (AAC73815.1)
YP_005251287.1	similar to Escherichia coli succinate dehydrogenase; hydrophobic subunit (AAC73816.1)
YP_005251288.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components
YP_005251289.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components
YP_005251290.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succin
YP_005251291.1	component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA
YP_005251292.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_005251293.1	Catalyzes the only substrate-level phosphorylation in the TCA cycle
YP_005251294.1	similar to Escherichia coli cytochrome d terminal oxidase; polypeptide subunit I (AAC73827.1)
YP_005251295.1	similar to Escherichia coli cytochrome d terminal oxidase polypeptide subunit II (AAC73828.1)
YP_005251298.1	catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope com
YP_005251299.1	membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins
YP_005251300.1	membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins
YP_005251301.1	inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins
YP_005251302.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_005251303.1	similar to Escherichia coli peptidoglycan-associated lipoprotein (AAC73835.1); tol protein required for outer membrane integrity, uptake of group A colicins, and translocation of phage DNA to cytoplasm
YP_005251304.1	periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity
YP_005251305.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_005251306.1	PNUC protein (SW:PNUC_SALTY); NMN family
YP_005251307.1	involved in zinc efflux across the cytoplasmic membrane
YP_005251308.1	similar to Escherichia coli putative homeobox protein (AAC73840.1)
YP_005251309.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_005251310.1	similar to Escherichia coli fumarase B; fumarate hydratase class I; anaerobic isozyme (AAC77083.1)
YP_005251311.1	Catalyzes the reversible hydration of fumaric acid to yield I-malic acid
YP_005251312.1	similar to Escherichia coli cyn operon positive regulator (AAC73441.1); LysR family
YP_005251313.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC77283.1); LysR family
YP_005251314.1	similar to Escherichia coli putative transport protein (AAC75352.1)
YP_005251315.1	catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide
YP_005251316.1	oxaloacetate decarboxylase beta chain (SW:DCOB_SALTY)
YP_005251318.1	similar to Escherichia coli ferric enterobactin transport (AAC73691.1)
YP_005251319.1	similar to Escherichia coli ATP-binding component of ferric enterobactin transport (AAC73689.1)
YP_005251320.1	2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate
YP_005251321.1	catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose
YP_005251322.1	catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism
YP_005251323.1	catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P
YP_005251324.1	UDP-glucose 4-epimerase (SW:GALE_SALTY)
YP_005251326.1	contains 2 ATP-binding cassettes; involved in the transport of molybdenum
YP_005251327.1	represses the modABCD operon and activates the moaABCD and napFDAGHBC operons
YP_005251329.1	with ModCB is involved in the high-affinity transport of molybdate
YP_005251330.1	part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE
YP_005251331.1	Part of the ABC transporter complex modABC involved in molybdenum import
YP_005251332.1	YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monopho
YP_005251333.1	catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate
YP_005251334.1	outer membrane lipoprotein that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; YbhC localizes to the cellular poles; member of pectinesterase family
YP_005251335.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_005251336.1	catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate
YP_005251337.1	similar to Escherichia coli transcriptional regulator of succinylCoA synthetase operon (AAC73824.1)
YP_005251338.1	similar to urocanate hydratase (Pid: YP_002636401.1).
YP_005251339.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_005251340.1	YbhB; similar to rat and human kinase inhibitory proteins
YP_005251341.1	catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate
YP_005251342.1	similar to Escherichia coli biotin synthesis (AAC73862.1)
YP_005251343.1	catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine
YP_005251344.1	putative methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth
YP_005251345.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_005251346.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_005251348.1	leucine-rich repeat protein SlrP (gi|5107020); secreted by SPI-1; type III secretion
YP_005251349.1	similar to Escherichia coli putative structural protein (AAC73867.1)
YP_005251350.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_005251351.1	similar to Escherichia coli molybdopterin biosynthetic protein B (AAC73869.1)
YP_005251352.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_005251353.1	catalyzes the conversion of molybdopterin precursor Z into molybdopterin
YP_005251354.1	catalyzes the conversion of molybdopterin precursor Z into molybdopterin
YP_005251360.1	similar to Escherichia coli putative synthetase (AAC73876.1); CL synthase
YP_005251363.1	putative ABC superfamily membrane protein
YP_005251364.1	putative ABC superfamily membrane protein
YP_005251365.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC73881.1)
YP_005251366.1	similar to Escherichia coli putative membrane protein (AAC73882.1); predicted cation efflux pump
YP_005251367.1	similar to Escherichia coli putative transcriptional regulator (AAC73883.1); TetR/AcrR family
YP_005251368.1	this helicase is not essential cell growth
YP_005251369.1	helicase involved in DNA repair and perhaps also replication
YP_005251370.1	similar to Escherichia coli putative enzyme (AAC73887.1)
YP_005251372.1	putative DnaK suppressor protein
YP_005251374.1	similar to Escherichia coli putative transport protein (AAC73895.1)
YP_005251375.1	similar to ATP-binding component of ABC transporters
YP_005251376.1	similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine
YP_005251377.1	similar to periplasmic-binding component of ABC transporters
YP_005251378.1	binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and
YP_005251379.1	hypothetical protein in dps-ompX intergenic region (SW:YBIF_SALTY)
YP_005251380.1	OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains
YP_005251381.1	similar to Escherichia coli putative enzyme (AAC73902.1)
YP_005251382.1	similar to hypothetical protein SPAB_02663 (Pid: YP_001588874.1).
YP_005251383.1	Transcriptional regulator that represses the manganese transporter MntH when manganese is present
YP_005251384.1	putative di-/tricarboxylate transporter
YP_005251386.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC73907.1); contains duplicated ATPase domain
YP_005251387.1	C-terminus is similar to N-terminus of some pyridine nucleotide transhydrogenase
YP_005251388.1	would extend upstream except for stop codon; putative N-terminally truncated hydrolase; HAD superfamily
YP_005251390.1	HAD superfamily
YP_005251391.1	similar to Escherichia coli putative formate acetyltransferase (AAC73910.1)
YP_005251392.1	similar to Escherichia coli putative pyruvate formate-lyase 2 activating enzyme (AAC73911.1)
YP_005251393.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_005251394.1	is involved in the formation of active molybdenum cofactor and the chelation of molybdenum
YP_005251395.1	similar to Escherichia coli putative asparaginase (AAC73915.1)
YP_005251396.1	with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains
YP_005251397.1	similar to Escherichia coli putative transport protein (AAC73917.1)
YP_005251398.1	similar to Escherichia coli putative transport system permease protein (AAC73918.1)
YP_005251399.1	similar to Escherichia coli putative transport system permease protein (AAC73919.1)
YP_005251400.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_005251401.1	BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2
YP_005251403.1	similar to Escherichia coli probable flavoprotein subunit; carnitine metabolism (AAC73152.1)
YP_005251404.1	similar to Escherichia coli putative flavoprotein (AAC74768.1)
YP_005251405.1	similar to hypothetical protein SPC_0855 (Pid: YP_002636468.1).
YP_005251406.1	similar to Escherichia coli putative oxidoreductase (AAC74765.1)
YP_005251407.1	similar to Escherichia coli flavoprotein; probable electron transport protein (AAC74769.1)
YP_005251408.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74667.1); LysR family
YP_005251410.1	similar to E. coli putative dehydrogenase(AAC73924.1); Blastp hit to AAC73924.1 (371 aa)
YP_005251411.1	similar to Escherichia coli putative transferase (AAC73925.1)
YP_005251412.1	penicillin-binding protein 6a; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains
YP_005251413.1	similar to Escherichia coli transcriptional repressor for deo operon, tsx, nupG (AAC73927.1); DeoR family
YP_005251415.1	similar to Escherichia coli proton motive force efflux pump (AAC73929.1)
YP_005251417.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC73932.1)
YP_005251418.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC73933.1); TetR/Acr family
YP_005251419.1	similar to Escherichia coli putative transport protein (AAC73934.1)
YP_005251421.1	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase
YP_005251422.1	YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function
YP_005251423.1	NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds
YP_005251424.1	responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6
YP_005251425.1	similar to Escherichia coli putative sensory transduction regulator (AAC73940.1)
YP_005251426.1	similar to Escherichia coli periplasmic putrescine-binding protein; permease protein (AAC73941.1); ABC superfamily periplasmic protein
YP_005251427.1	part of the PotFGHI ATP-dependent putrescine transporter
YP_005251428.1	similar to Escherichia coli putrescine transport protein; permease (AAC73943.1); ABC superfamily membrane protein
YP_005251429.1	similar to Escherichia coli putrescine transport protein; permease (AAC73944.1); ABC superfamily membrane protein
YP_005251431.1	RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA
YP_005251432.1	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
YP_005251433.1	similar to SgaT from Vibrio
YP_005251434.1	similar to Escherichia coli putative sulfatase (AAC76701.1)
YP_005251435.1	similar to Escherichia coli arginine 3rd transport system periplasmic binding protein (AAC73947.1); ABC superfamily binding protein
YP_005251436.1	with ArtPQJI acts to transport arginine across the inner membrane
YP_005251437.1	with ArtPMJI transports arginine across the inner membrane
YP_005251438.1	similar to Escherichia coli arginine 3rd transport system periplasmic binding protein (AAC73950.1); ABC superfamily binding protein
YP_005251439.1	With ArtMQJI transports arginine across the inner membrane
YP_005251440.1	induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS
YP_005251442.1	similar to Escherichia coli putative regulator (AAC73954.1)
YP_005251443.1	similar to Escherichia coli putative nucleotide di-P-sugar epimerase or dehydratase (AAC73955.1)
YP_005251444.1	similar to Escherichia coli putative dTDP-glucose enzyme (AAC73956.1)
YP_005251445.1	low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine
YP_005251446.1	catalyzes the formation of acetate from pyruvate
YP_005251447.1	similar to Escherichia coli putative enzyme (AAC73959.1); hcp gene product
YP_005251448.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_005251449.1	similar to Escherichia coli putative surface protein (AAC73961.1)
YP_005251450.1	similar to RecF protein
YP_005251451.1	similar to Escherichia coli putative enzyme (AAC73964.1)
YP_005251452.1	confers macrolide resistance via active drug efflux
YP_005251453.1	with MacA is involved in the export of macrolide
YP_005251454.1	similar to Escherichia coli cold shock protein CspA (AAC73967.1); stationary phase-induced
YP_005251455.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_005251456.1	ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates
YP_005251457.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005251458.1	similar to Escherichia coli IS150 putative transposase (AAC76582.1)
YP_005251460.1	similar to slsA in STM (gi|4324613); similar to STM3761
YP_005251462.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73313.1); LysR family
YP_005251463.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_005251465.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_005251466.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_005251467.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_005251468.1	catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding
YP_005251469.1	mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system
YP_005251470.1	participates with LolB in the incorporation of lipoprotein into the outer membrane
YP_005251471.1	similar to Escherichia coli putative polynucleotide enzyme (AAC73978.1)
YP_005251472.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_005251473.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit A (AAC73980.1)
YP_005251474.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit B (AAC73981.1)
YP_005251475.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit C (AAC73982.1)
YP_005251476.1	similar to Escherichia coli putative transport (AAC73984.1); MFS family
YP_005251477.1	similar to Escherichia coli putative transport (AAC73985.1); APC family
YP_005251478.1	activates pyruvate formate-lyase 1 under anaerobic conditions
YP_005251481.1	similar to Escherichia coli formate acetyltransferase 1 (AAC73989.1); induced anaerobically
YP_005251482.1	similar to Escherichia coli probable formate transporter; formate channel 1 (AAC73990.1); FNT family
YP_005251485.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_005251486.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_005251487.1	similar to Escherichia coli putative heat shock protein (AAC73995.1); has chaperone function
YP_005251488.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_005251489.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the
YP_005251490.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_005251492.1	involved in the transport of lipid A across the inner membrane
YP_005251493.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_005251496.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_005251499.1	involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA
YP_005251500.1	acts with MukB and MukE to condense the chromosome and allow for segregation during cell division
YP_005251501.1	acts with MukB and MukF to condense the chromosome and allow for segregation during cell division
YP_005251502.1	SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations resu
YP_005251503.1	similar to Escherichia coli putative amidase (AAC74011.1)
YP_005251506.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_005251507.1	outer membrane protein F precursor; porin; (SW:OMPF_SALTY)
YP_005251508.1	transcriptional repressor of asnA which codes for aspartate-ammonia ligase
YP_005251509.1	similar to Escherichia coli regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system (AAC73975.1)
YP_005251510.1	catalyzes the formation of pyruvate from 2,3-diaminopropionate
YP_005251511.1	similar to Escherichia coli inner membrane transport protein (AAC73118.1); Lrp family
YP_005251512.1	catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate
YP_005251513.1	similar to Escherichia coli putative transposase (AAC74651.1)
YP_005251516.1	hypothetical protein AAC26069.1 (gi|7467267)
YP_005251517.1	similar to exodeoxyribonuclease VIII (gi|7467238)
YP_005251520.1	probable regulatory protein (gi|7467281)
YP_005251521.1	probable regulatory protein (gi|7467282)
YP_005251522.1	probable replication protein (gi|7467283)
YP_005251523.1	acts to load the DnaB helicase onto the intiation site durning DNA replication
YP_005251529.1	similar to hypothetical protein SPAB_02252 (Pid: YP_001588468.1).
YP_005251531.1	DnaJ family
YP_005251537.1	similar to Escherichia coli bacteriophage lambda lysozyme (AAC73656.1)
YP_005251538.1	bacteriophage ES18 gp15 protein (gi|1143595)
YP_005251541.1	similar to hypothetical protein SPC_2719 (Pid: YP_002638260.1).
YP_005251543.1	similar to Escherichia coli ATP-dependent proteolytic subunit of ClpA-ClpP serine protease; heat shock protein F21.5 (AAC73540.1)
YP_005251551.1	similar to lambda phage H tail component (gi|2232364)
YP_005251552.1	similar to lambda phage M tail component (gi|2232363)
YP_005251553.1	similar to OmpX (gi|2232362)
YP_005251554.1	SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water
YP_005251555.1	similar to lambda phage L tail component (gi|2232360)
YP_005251558.1	similar to phage lambda protein J
YP_005251559.1	similar to hypothetical protein SeSA_A0709 (Pid: YP_002113672.1).
YP_005251560.1	similar to Escherichia coli putative membrane protein (AAC74454.1)
YP_005251561.1	similar to tail fiber assembly protein (gi|8927433)
YP_005251562.1	secreted effector I (gi|8927434); secreted by SPI-2; colocalizes with host polymerizing actin cytoskeleton
YP_005251563.1	similar to ISSfl3 orfC,D (Pid: YP_002638239.1).
YP_005251568.1	similar to Escherichia coli aminopeptidase N (AAC74018.1)
YP_005251569.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays
YP_005251572.1	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA
YP_005251573.1	Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth
YP_005251574.1	similar to Escherichia coli paraquat-inducible protein A (AAC74036.1)
YP_005251575.1	similar to Escherichia coli paraquat-inducible protein B (AAC74037.1)
YP_005251577.1	similar to Escherichia coli ribosome modulation factor (AAC74039.1); involved in dimerization of 70S ribosomes
YP_005251578.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_005251579.1	similar to Escherichia coli putative ATP-dependent protease (AAC74041.1)
YP_005251580.1	similar to Escherichia coli putative dehydrogenase (AAC74042.1)
YP_005251581.1	OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-fa
YP_005251582.1	suppressor of lon (SW:SULA_SALTY); inhibitor of cell division and FtsZ ring formation upon DNA damage/inhibition; HslVU and Lon involved in its turnover
YP_005251584.1	efflux PET family
YP_005251586.1	catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand
YP_005251587.1	catalyzes the formation of methylglyoxal from glycerone phosphate
YP_005251591.1	similar to Escherichia coli putative oxidoreductase (AAC74053.1)
YP_005251593.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC73647.1); AraC family
YP_005251594.1	catalyzes the hydrolysis of acylphosphate
YP_005251595.1	transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs
YP_005251596.1	similar to Escherichia coli putative carrier/transport protein (AAC74056.1); TegT family
YP_005251597.1	similar to Gifsy prophage protein GtgA; GogA (STM1026)
YP_005251598.1	pathogenicity island-encoded protein B; similar to STM2780; secreted by SPI-2; type III secretion; localizes to Salmonella-containing vacuole and host cell membranes
YP_005251600.1	similar to ipgE of Shigella; invasion gene E protein (gi|2582386); similar to type III secretion chaperones SigE and CesT
YP_005251601.1	SigD; Salmonella outer protein B; similar to ipgD of Shigella; invasion gene D protein (gi|2582385); secreted by SPI-1; type III secretion
YP_005251604.1	similar to dipeptidase A
YP_005251605.1	histidine kinase; similar to Escherichia coli putative 2-component sensor protein (AAC75034.1)
YP_005251606.1	induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistanc
YP_005251607.1	putative periplasmic protein
YP_005251611.1	similar to Escherichia coli putative isomerase (AAC74264.1)
YP_005251612.1	similar to Escherichia coli aldehyde dehydrogenase; prefers NADP over NAD (AAC74382.1)
YP_005251615.1	similar to Escherichia coli 2-keto-4-pentenoate hydratase (AAC73453.1)
YP_005251617.1	similar to Escherichia coli putative transport protein (AAC75306.1)
YP_005251618.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC74766.1)
YP_005251620.1	RssC (gi|12004175)
YP_005251621.1	with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA
YP_005251622.1	functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock
YP_005251623.1	suppressor for copper-sensitivity A (gi|2327003); putative copper binding protein
YP_005251624.1	suppressor for copper-sensitivity B (gi|2327004); suppression of copper sensitivity
YP_005251625.1	suppressor for copper-sensitivity C (gi|2327005); suppression of copper sensitivity
YP_005251626.1	suppressor for copper-sensitivity D (gi|2327006); suppression of copper sensitivity
YP_005251627.1	glucose-1-phosphatase precursor (SW:AGP_SALTY)
YP_005251629.1	stationary phase protein that binds TrpR repressor
YP_005251631.1	similar to Escherichia coli putative tet operon regulator (AAC74098.1); TetR/AcrR family
YP_005251633.1	PUTA protein (SW:PUTA_SALTY); bifunctional inplasma membrane proline dehydrogenase andpyrroline-5-carboxylate dehydrogenase OR in cytoplasm atranscriptional repressor; plasma membranepyrroline-5-carboxylate dehydrogenase; cytoplasmictranscriptional repres
YP_005251634.1	sodium/proline symporter proline permease (SW:PUTP_SALTY); SSS family
YP_005251635.1	similar to E. coli PhoB-dependent, ATP-binding phoregulon component; may be helicase; induced by Pstarvation (AAC74105.1); Blastp hit to AAC74105.1 (354aa)
YP_005251637.1	similar to Escherichia coli putative cotransporter (AAC76702.1)
YP_005251638.1	Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate
YP_005251641.1	similar to Escherichia coli putative transport protein (AAC77235.1)
YP_005251642.1	similar to Escherichia coli putative dehydrogenase (AAC77236.1)
YP_005251643.1	similar to Escherichia coli putative dehydrogenase (AAC74117.1)
YP_005251644.1	similar to hydrolases of the PHP family
YP_005251645.1	similar to Escherichia coli putative oxidoreductase component (AAC74119.1)
YP_005251646.1	hypothetical protein in phoH-csgG intergenic region (SW:YCDZ_SALTY)
YP_005251647.1	curli production assembly/transport component CsgG precursor (SW:CSGG_SALTY)
YP_005251648.1	nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli sec
YP_005251649.1	chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curl
YP_005251650.1	activates the csgBA and csgDEFG operons involved in biofilm formation
YP_005251651.1	CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface
YP_005251652.1	major curlin subunit precursor; fimbrin SEF17 (SW:CSGA_SALTY); coiled surface structures; cryptic
YP_005251653.1	involved in autoagglutination of curliated cells; not involved in production of curli fibers
YP_005251654.1	hypothetical protein in csgC-mdoG intergenic region precursor (SW:YMDA_SALTY)
YP_005251655.1	similar to Escherichia coli putative polyprotein (AAC74129.1); putative ACR related to the C-terminal domain of histone macroH2A1
YP_005251656.1	similar to Escherichia coli putative synthase (AAC74130.1)
YP_005251657.1	required for the transfer of succinyl residues to the glucan backbone
YP_005251658.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_005251659.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_005251661.1	similar to Escherichia coli acidic protein; suppresses mutants lacking function of protein export (AAC74135.1)
YP_005251662.1	Confers resistance to fosfomycin and deoxycholate
YP_005251663.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA
YP_005251666.1	similar to Escherichia coli putative cytochrome (AAC74141.1)
YP_005251668.1	catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids
YP_005251669.1	BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2
YP_005251670.1	similar to Escherichia coli damage-inducible protein I (AAC74145.1); inhibits UmuD processing
YP_005251671.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_005251672.1	hypothetical protein in pyrC 3'region (SW:YCEB_SALTY)
YP_005251673.1	cofactor involved in the reduction of disulfides
YP_005251674.1	Confers resistance to norfloxacin and enoxacin
YP_005251675.1	similar to Escherichia coli acetylase; acetylates N-terminal alanine of 30S ribosomal subunit protein S5 (AAC74150.1)
YP_005251677.1	virulence factor MviM (SW:MVIM_SALTY)
YP_005251678.1	virulence factor MviN (SW:MVIN_SALTY)
YP_005251679.1	flagella synthesis protein FlgN (SW:FLGN_SALTY)
YP_005251680.1	regulates the flagellar specific sigma28 transcription factor
YP_005251681.1	required for the assembly of the flagellar basal body P-ring
YP_005251682.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_005251683.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_005251684.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella p
YP_005251685.1	the hook connects flagellar basal body to the flagellar filament
YP_005251686.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
YP_005251687.1	makes up the distal portion of the flagellar basal body rod
YP_005251688.1	part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod
YP_005251689.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associa
YP_005251690.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
YP_005251691.1	with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook
YP_005251692.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes
YP_005251693.1	bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase
YP_005251694.1	catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA
YP_005251696.1	similar to hypothetical protein SNSL254_A1286 (Pid: YP_002040442.1).
YP_005251697.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_005251698.1	hypothetical protein in rne-rpmF intergenic region (G30K) (SW:YCED_SALTY)
YP_005251699.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_005251700.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_005251701.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioester
YP_005251702.1	malonyl coA-acyl carrier protein transacylase (SW:FABD_SALTY)
YP_005251703.1	catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_005251704.1	carries the fatty acid chain in fatty acid biosynthesis
YP_005251705.1	FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_005251706.1	catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate
YP_005251707.1	similar to Escherichia coli putative thymidylate kinase (AAC74181.1)
YP_005251708.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_005251709.1	catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA
YP_005251711.1	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group t
YP_005251712.1	similar to Escherichia coli outer membrane receptor for ferric iron uptake (AAC74186.1); receptor for Fe(III)-coprogen, Fe(III)-ferrioxamine B and Fe(III)-rhodotrulic acid uptake
YP_005251716.1	catalyzes the phosphorylation of thiamine to thiamine phosphate
YP_005251717.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_005251719.1	similar to Escherichia coli respiratory NADH dehydrogenase (AAC74193.1); cupric reductase
YP_005251721.1	TetR/AcrR family
YP_005251724.1	similar to Escherichia coli transcription-repair coupling factor; mutation frequency decline (AAC74198.1); results in preferential repair of transcribed DNA
YP_005251725.1	part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane
YP_005251726.1	outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone
YP_005251727.1	part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane
YP_005251728.1	catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine
YP_005251729.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_005251730.1	can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate
YP_005251731.1	can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component
YP_005251732.1	translocated by the type III secretion system SPI-2; required for the formation of lysosomal glycoprotein structures (Sifs); required for maintenance of membrane in the Salmonella-containing vacuole; a cysteine residue with CAAX motif is modified by isopr
YP_005251733.1	can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component
YP_005251734.1	functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase
YP_005251735.1	catalyzes the release of the N-terminal amino acid from a tripeptide
YP_005251736.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005251738.1	virulence sensor protein PhoQ (SW:PHOQ_SALTY); in two-component regulatory system with PhoP; ligand is Mg+
YP_005251739.1	response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress
YP_005251740.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_005251741.1	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis
YP_005251742.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_005251743.1	similar to Escherichia coli putative phosphohydrolase (AAC74218.1)
YP_005251746.1	Converts isocitrate to alpha ketoglutarate
YP_005251748.1	similar to hypothetical protein SPAB_02132 (Pid: YP_001588348.1).
YP_005251749.1	probable lipoprotein EnvF precursor (SW:ENVF_SALTY)
YP_005251750.1	virulence protein MsgA (SW:MSGA_SALTY); reduced mouse virulence; similar to STM2231 and STM2244
YP_005251751.1	probable lipoprotein EnvE precursor (SW:ENVE_SALTY)
YP_005251752.1	cold shock-like protein CspH (SW:CSPH_SALTY)
YP_005251753.1	(SW:PAGD_SALTY); PhoP regulated protein
YP_005251754.1	(SW:PAGC_SALTY); PhoP regulated; reduced macrophage survival
YP_005251755.1	PliC; periplasmic lysozyme inhibitor of c-type lysozyme
YP_005251757.1	similar to Escherichia coli small heat shock protein (AAC76710.1)
YP_005251759.1	similar to Escherichia coli putative cytochrome (AAC75040.1)
YP_005251761.1	putative substrate-binding protein (gi|2337942)
YP_005251762.1	putative transmembrane protein (gi|2337943)
YP_005251763.1	putative transmembrane protein (gi|2337944)
YP_005251764.1	putative ATPase (gi|2337945); contain duplicated ATPase domain
YP_005251765.1	putative ATPase (gi|2337946); contains duplicated ATPase domain
YP_005251768.1	similar to C-terminus of adhesion lipoprotein
YP_005251769.1	streptomycin 3'-adenyltransferase
YP_005251770.1	contains CheY-like receiver domain and HTH DNA-binding domain
YP_005251771.1	similar to Escherichia coli putative transcriptional regulator (AAC74246.1)
YP_005251774.1	catalyzes the interconversion of chorismate to prephenate
YP_005251783.1	similar to Escherichia coli putative amino acid/amine transport protein (AAC74861.1); MFS family
YP_005251784.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC74860.1); AraC/XylS family
YP_005251788.1	contains diguanylate cyclase/phosphodiesterase domain 1
YP_005251791.1	scaffolding protein for murein-synthesizing holoenzyme
YP_005251792.1	similar to Escherichia coli putative arylsulfatase regulator (AAC76803.1)
YP_005251793.1	similar to Escherichia coli putative aldehyde reductase (AAC74851.1)
YP_005251795.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate
YP_005251796.1	this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress
YP_005251798.1	catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide
YP_005251799.1	converts asparagine to aspartate and ammonia
YP_005251800.1	SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane
YP_005251802.1	catalyzes the formation of selenophosphate from selenide and ATP
YP_005251803.1	decatenates replicating daughter chromosomes
YP_005251804.1	converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer
YP_005251806.1	MutT
YP_005251807.1	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction
YP_005251808.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxo
YP_005251810.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_005251811.1	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation
YP_005251812.1	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism
YP_005251813.1	periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP
YP_005251814.1	3' incision activity; acts with UvrC
YP_005251815.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli
YP_005251816.1	osmotically-inducible lipoprotein E; activator of ntr-like gene protein
YP_005251817.1	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl gr
YP_005251818.1	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl gr
YP_005251819.1	catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group
YP_005251820.1	represses the celABCDF-ydjC operon involved in carbon uptake
YP_005251821.1	similar to Escherichia coli phospho-beta-glucosidase; cryptic (AAC74804.1)
YP_005251823.1	Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide
YP_005251824.1	affects inhibition after overreplication of chromosome in dnaAcos mutants
YP_005251825.1	similar to Escherichia coli part of a kinase (AAC74799.1)
YP_005251826.1	LexA-regulated gene
YP_005251827.1	YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate
YP_005251831.1	similar to Escherichia coli 6-phosphofructokinase II; suppressor of pfkA (AAC74793.1)
YP_005251832.1	salt-inducible
YP_005251837.1	O-antigen polymerase (SW:RFC_SALTY)
YP_005251838.1	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to
YP_005251839.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes fo
YP_005251840.1	similar to Escherichia coli 50S ribosomal subunit protein A (AAC74787.1)
YP_005251841.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_005251842.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium
YP_005251843.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions
YP_005251844.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_005251845.1	with BtuD and BtuF transports vitamin B12 into the cell
YP_005251846.1	similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane
YP_005251847.1	ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell
YP_005251848.1	similar to Escherichia coli lipoprotein (AAC74778.1)
YP_005251849.1	putative diguanylate cyclase/phosphodiesterase domain 1
YP_005251852.1	tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
YP_005251854.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_005251855.1	acts in anaerobic beta-oxidation of fatty acids; possible ligase/synthase involved in anaerobic growth on fatty acids
YP_005251857.1	similar to Escherichia coli flavoprotein; probably electron transport (AAC74769.1)
YP_005251858.1	May play a role in a redox process
YP_005251859.1	YdiO, YdiQ, YdiR, YdiS, and YdiT may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain
YP_005251860.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC74766.1); AraC family
YP_005251861.1	may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain
YP_005251862.1	similar to Escherichia coli putative enzyme (AAC74764.1)
YP_005251863.1	catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis
YP_005251864.1	catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_005251865.1	similar to Escherichia coli putative amino acid/amine transport protein (AAC74761.1); MFS family
YP_005251866.1	similar to Escherichia coli putative transport system permease protein (AAC74760.1); MFS family
YP_005251868.1	YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function
YP_005251869.1	similar to Escherichia coli putative oxidase (AAC74757.1)
YP_005251870.1	possibly involved in aromatic compounds catabolism; PaaI
YP_005251872.1	similar to Escherichia coli part of a kinase (AAC74799.1)
YP_005251873.1	functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein
YP_005251874.1	with SufCD activates cysteine desulfurase SufS
YP_005251875.1	part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE
YP_005251876.1	with SufBC activates cysteine desulfurase SufS
YP_005251877.1	catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine
YP_005251878.1	Acts with SufS to catalyze the formation of L-alanine from L-cysteine
YP_005251879.1	contains putative LysM domain
YP_005251880.1	similar to Escherichia coli murein lipoprotein (AAC74747.1)
YP_005251881.1	similar to Escherichia coli murein lipoprotein (AAC74747.1)
YP_005251882.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_005251883.1	amino acid permease YeeF-like protein (gi|1526981)
YP_005251884.1	hydrolase or acyltransferase (gi|1526980)
YP_005251885.1	ORF 245 (gi|4456875); similar to STM3548
YP_005251886.1	ORF 408 (gi|4456874); DeoR family
YP_005251887.1	tetrathionate reductase subunit A; TtrA (gi|4456873)
YP_005251888.1	tetrathionate reductase subunit C; TtrC (gi|4456872)
YP_005251889.1	tetrathionate reductase subunit B; TtrB (gi|4456871)
YP_005251890.1	tetrathionate reductase complex; TtrS (gi|4456870); two-component regulatory system
YP_005251891.1	tetrathionate reductase complex; TtrR (gi|4456869); two-component regulatory system
YP_005251892.1	hypothetical 7.9 kDa protein in ssrB-ttRr intergenic region (ORF70) (SW:YDHZ_SALTY)
YP_005251893.1	ORF 319 (gi|4456867)
YP_005251894.1	ORF 242 (gi|4456866); merR family
YP_005251895.1	SsrB (gi|2765824); type III secretion system regulator; similar to DegU/UvrY/BvgA; regulated by OmpR-EnvZ; controls regulation of SPI-2 expression
YP_005251896.1	SpiR (gi|1498305); type III secretion system regulator; regulated by OmpR-EnvZ
YP_005251897.1	Salmonella typhimurium SpiC (gi|1498306); effects secretion of other SPI-2 proteins; interacts with host cell TassC and Hook3 proteins; type III secretion; prevents fusion of endosome/lysosome with Salmonella-containing vacuoles
YP_005251898.1	SpiA (gi|1498307); type III secretion system apparatus
YP_005251899.1	SpiB (gi|1498308); type III secretion system
YP_005251900.1	putative secretory apparatus component (gi|3377860)
YP_005251901.1	catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds
YP_005251902.1	enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I
YP_005251903.1	putative secretion chaperone (gi|3377863)
YP_005251904.1	SseC (gi|3377864)
YP_005251905.1	SseD (gi|3776122)
YP_005251906.1	SseE (gi|3377866)
YP_005251907.1	SscB (gi|3377867)
YP_005251908.1	SseF (gi|3377868)
YP_005251909.1	SseG (gi|3377858)
YP_005251910.1	SsaH (gi|2460267)
YP_005251911.1	SsaH (gi|3776128)
YP_005251912.1	SsaI (gi|3776129)
YP_005251913.1	similar to yscJ/mxiJ/prgK family of lipoproteins; secretion system apparatus lipoprotein SsaJ precursor (SW:SSAJ_SALTY)
YP_005251915.1	secretion system apparatus protein SsaK (SW:SSAK_SALTY)
YP_005251916.1	secretion system apparatus protein SsaL (SW:SSAL_SALTY)
YP_005251917.1	secretion system apparatus protein SsaM (SW:SSAM_SALTY)
YP_005251918.1	with SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system
YP_005251919.1	similar to YscN family of proteins; probable secretion system apparatus ATP synthase SsaN (SW:SSAN_SALTY)
YP_005251920.1	secretion system apparatus protein SsaO (SW:SSAO_SALTY)
YP_005251921.1	secretion system apparatus protein SsaP (SW:SSAP_SALTY)
YP_005251922.1	secretion system apparatus protein SsaQ (SW:SSAQ_SALTY); type III secretion system apparatus protein
YP_005251923.1	part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response
YP_005251924.1	secretion system apparatus protein SsaS (SW:SSAS_SALTY); similar to YscS of the secretion system of Yersinia
YP_005251925.1	secretion system apparatus protein SsaT (SW:SSAT_SALTY); similar to YscT of the secretion system of Yersinia
YP_005251926.1	member of a type III secretion system which is part of a pathogenicity island in Salmonella, Yersinia and pathogenic Escherichia coli
YP_005251927.1	NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones
YP_005251928.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_005251929.1	catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge
YP_005251930.1	uncharacterized member of the major facilitator superfamily (MFS)
YP_005251931.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74731.1); LysR family
YP_005251932.1	binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers
YP_005251933.1	SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals
YP_005251934.1	similar to Escherichia coli putative lipoprotein (AAC74727.1)
YP_005251936.1	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A)
YP_005251937.1	Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione
YP_005251938.1	FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide
YP_005251939.1	TetR/AcrR family
YP_005251942.1	SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water
YP_005251944.1	similar to Escherichia coli putative membrane protein (AAC74716.1)
YP_005251946.1	Transcription regulator that can both activate or repress expression
YP_005251947.1	outer membrane lipoprotein SlyB precursor (SW:SLYB_SALTY)
YP_005251948.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_005251949.1	MliC; membrane-bound lysozyme inhibitor of c-type lysozyme
YP_005251950.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_005251951.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_005251952.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_005251953.1	similar to Escherichia coli glutathionine S-transferase (AAC74707.1)
YP_005251954.1	mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation
YP_005251955.1	DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines
YP_005251956.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
YP_005251957.1	part of membrane-bound complex hought to be involved in electron transport to nitrogen
YP_005251958.1	RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of t
YP_005251959.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_005251960.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_005251961.1	inner membrane protein
YP_005251963.1	YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate
YP_005251965.1	catalyzes the formation of inosine from adenosine
YP_005251967.1	mannose-6-phosphate isomerase (SW:MANA_SALTY)
YP_005251968.1	fumarate hydratase class I aerobic isozyme (SW:FUMA_SALTY)
YP_005251969.1	class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle
YP_005251970.1	binds to DNA replication terminator sequences to prevent passage of replication forks
YP_005251971.1	similar to Escherichia coli sensor histidine protein kinase (RstA regulator) (AAC74681.1); in two-component regulatory system with RstA
YP_005251973.1	similar to Escherichia coli putative outer membrane protein (AAC74459.1); non-specific porin
YP_005251974.1	response regulator in two-component regulatory system with RstB
YP_005251976.1	similar to Escherichia coli putative arginine/ornithine antiporter (AAC74677.1)
YP_005251978.1	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons fro
YP_005251979.1	catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-ste
YP_005251980.1	transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes
YP_005251981.1	with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS
YP_005251982.1	with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS
YP_005251984.1	required for growth and survival under moderately acid conditions
YP_005251985.1	similar to Escherichia coli putative transport protein (AAC74668.1); MFS family
YP_005251986.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74667.1); LysR family
YP_005251987.1	similar to Escherichia coli putative NagC-like transcriptional regulator (AAC74666.1); repressor of ptsG and ptsHI; global repressor of carbohydrate metabolism pts operon; NagC/XylR family
YP_005251988.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_005251989.1	similar to Escherichia coli putative chloride channel (AAC74664.1)
YP_005251990.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC75190.1); ABC-type ATPase component
YP_005251991.1	similar to Escherichia coli putative transport system permease protein (AAC75189.1); binding-protein-dependent
YP_005251992.1	similar to Escherichia coli putative transport system permease protein (AAC75192.1)
YP_005251993.1	similar to Escherichia coli putative transport system permease protein (AAC75189.1); ABC-type transport systems
YP_005251994.1	binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane
YP_005251995.1	similar to Escherichia coli putative DMSO reductase anchor subunit (AAC74662.1)
YP_005251996.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit B (AAC73981.1)
YP_005251997.1	similar to Escherichia coli putative oxidoreductase; major subunit (AAC74660.1)
YP_005251998.1	similar to Escherichia coli putative oxidoreductase; major subunit (AAC74659.1)
YP_005252001.1	similar to Escherichia coli spermidine N1-acetyltransferase (AAC74656.1)
YP_005252004.1	similar to Escherichia coli starvation-sensing protein (AAC74653.1)
YP_005252005.1	similar to Escherichia coli starvation-sensing protein (AAC74652.1)
YP_005252006.1	similar to E. coli putative transport protein(AAC74616.1); Blastp hit to AAC74616.1 (427 aa)
YP_005252007.1	similar to inner membrane metabolite transport protein YdfJ (Pid: YP_002114523.1).
YP_005252008.1	similar to Escherichia coli putative oxidoreductase (AAC74615.1)
YP_005252010.1	GntR family
YP_005252011.1	NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine
YP_005252012.1	peptidyl-dipeptidase DCP (SW:DCP_SALTY)
YP_005252016.1	similar to hypothetical protein SeHA_C1687 (Pid: YP_002045555.1).
YP_005252017.1	YdeF; uncharacterized member of the major facilitator superfamily (MFS) of transporters
YP_005252018.1	probable cysteine metabolite efflux pump (SW:EAMA_SALTY); integral membrane protein
YP_005252019.1	multiple antibiotic resistance protein MarB (SW:MARB_SALTY)
YP_005252020.1	transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF
YP_005252021.1	Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes
YP_005252022.1	protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function
YP_005252023.1	similar to Escherichia coli putative resistance/regulatory protein (AAC74601.1); contributes to control of arabinose regulon; MFS family
YP_005252024.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74599.1); LysR family
YP_005252025.1	in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase
YP_005252026.1	catalyzes the formation of glutamate from glutamine
YP_005252031.1	similar to Escherichia coli putative outer membrane protein (AAC74459.1)
YP_005252032.1	similar to Escherichia coli may modulate levels of hydrogenease-2 (AAC76027.1)
YP_005252034.1	similar to Escherichia coli nickel incorporation into hydrogenase-1 proteins (AAC74062.1)
YP_005252035.1	similar to Escherichia coli processing of HyaA and HyaB proteins (AAC74061.1)
YP_005252037.1	similar to Escherichia coli processing of HyaA and HyaB proteins (AAC74060.1)
YP_005252038.1	similar to Escherichia coli probable Ni/Fe hydrogenase 1 b-type cytochrome subunit (AAC74059.1)
YP_005252039.1	similar to Escherichia coli hydrogenase-1 large subunit (AAC74058.1)
YP_005252040.1	similar to Escherichia coli hydrogenase-1 small subunit (AAC74057.1)
YP_005252041.1	similar to hypothetical protein SPC_2188 (Pid: YP_002637753.1).
YP_005252043.1	similar to Escherichia coli regulator for uxu operon (AAC77280.1); GntR family
YP_005252044.1	similar to Escherichia coli starvation-sensing protein (AAC74652.1)
YP_005252045.1	similar to Escherichia coli putative transport protein (AAC76161.1)
YP_005252047.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC73932.1)
YP_005252048.1	similar to Escherichia coli 3-(3-hydroxyphenyl)propionate hydroxylase (AAC73450.1)
YP_005252049.1	marR-family
YP_005252050.1	similar to Escherichia coli synthesis of queuine in tRNA; probably S-adenosylmethionine/tRNA ribosyltransferase-isomerase (AAC73508.1)
YP_005252054.1	similar to hypothetical protein STM1551.1n (Pid: NP_945161.1).
YP_005252058.1	similar to hypothetical protein SPC_2184 (Pid: YP_002637750.1).
YP_005252060.1	similar to Escherichia coli repressor of galETK operon (AAC75876.1)
YP_005252061.1	similar to Escherichia coli transport of dicarboxylates (AAC73722.1)
YP_005252062.1	similar to Escherichia coli enzyme that may degrade or block biosynthesis of endogenous mal inducer; probably aminotrasferase (AAC74694.1)
YP_005252063.1	similar to Escherichia coli part of glycogen operon; glycosyl hydrolase; debranching enzyme (AAC76456.1)
YP_005252064.1	similar to Escherichia coli trehalase 6-P hydrolase (AAC77196.1)
YP_005252065.1	similar to Escherichia coli 1,4-alpha-glucan branching enzyme (AAC76457.1)
YP_005252066.1	outer membrane or secreted
YP_005252068.1	similar to Escherichia coli osmotically inducible protein (AAC74555.1); resistance protein; osmotically inducible
YP_005252070.1	protein D; stationary-phase-induced ribosome-associated; in Escherichia coli this protein becomes associated with the ribosome; expression increases during stationary phase
YP_005252071.1	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate
YP_005252072.1	similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs
YP_005252073.1	nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase
YP_005252074.1	similar to Escherichia coli formate dehydrogenase-N; nitrate-inducible; iron-sulfur beta subunit (AAD13439.1); Fe-S beta subunit
YP_005252076.1	outer membrane porin protein PmpD (SW:OMPD_SALTY)
YP_005252078.1	methyl viologen resistance protein SmvA (SW:SMVA_SALTY)
YP_005252079.1	TetR family
YP_005252080.1	nitrite extrusion protein 2; nitrite facilitator 2 (SW:NARU_SALTY); MFS superfamily
YP_005252081.1	similar to Escherichia coli cryptic nitrate reductase 2; alpha subunit (AAC74550.1)
YP_005252082.1	similar to Escherichia coli cryptic nitrate reductase 2; beta subunit (AAC74549.1)
YP_005252083.1	similar to Escherichia coli cryptic nitrate reductase 2; delta subunit; assembly function (AAC74548.1)
YP_005252084.1	similar to Escherichia coli cryptic nitrate reductase 2; gamma subunit (AAC74547.1)
YP_005252085.1	hypothetical protein in nhoA 5'region (SW:YDDE_SALTY)
YP_005252086.1	N-hydroxyarylamine O-acetyltransferase (SW:NHOA_SALTY)
YP_005252088.1	L-asparagine permease (L-asparagine transport protein) (SW:ANSP_SALTY); APC family
YP_005252090.1	similar to Escherichia coli putative receptor (AAC74534.1)
YP_005252091.1	similar to Escherichia coli putative outer membrane receptor for iron transport (AAC74533.1)
YP_005252092.1	GntR family
YP_005252093.1	similar to Escherichia coli putative oxidoreductase (AAC74531.1)
YP_005252094.1	similar to Escherichia coli putative resistance protein (AAC74530.1)
YP_005252097.1	SrfA (gi|8347258); ssrAB-activated gene
YP_005252098.1	SrfB (gi|8347259); ssrAB-activated gene
YP_005252099.1	SrfC (gi|8347260); contains predicted coiled-coil structure; ssrAB-activated gene
YP_005252101.1	catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation
YP_005252102.1	similar to Escherichia coli multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system (AAC74521.1); GntR family
YP_005252103.1	D-alanyl-D-alanine dipeptidase for peptidoglycan digestion (gi|4585342)
YP_005252105.1	putative membrane protein UgtL (gi|4585341); similar to chitinase from Schizosaccharomyces
YP_005252106.1	translocated by the type III secretion system SPI-2; localizes to Sifs in infected cells and specifically to Salmonella-containing vacuoles
YP_005252108.1	similar to Escherichia coli putative collagenase (AAC74517.1)
YP_005252109.1	oxidoreductase
YP_005252110.1	similar to Escherichia coli putative membrane transport protein (AAC74515.1)
YP_005252112.1	with TehA confers resistance to tellurite
YP_005252113.1	similar to Escherichia coli tellurite resistance (AAC74511.1); TDT family
YP_005252114.1	involved in lipopolysaccharide biosynthesis
YP_005252115.1	similar to Escherichia coli acetylase; acetylates N-terminal serine of 50S ribosomal subunit protein L7/L12 (AAC74509.1)
YP_005252116.1	similar to Escherichia coli putative lyase/synthase (AAC77261.1)
YP_005252117.1	similar to Escherichia coli galactitol-specific enzyme IIB of phosphotransferase system (AAC75154.1)
YP_005252118.1	similar to Escherichia coli putative PTS system enzyme IIC component (AAC77260.1)
YP_005252119.1	similar to Escherichia coli putative nucleoside triphosphatase (AAC77259.1)
YP_005252120.1	similar to Escherichia coli putative PTS system enzyme II A component (AAC77258.1)
YP_005252121.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
YP_005252122.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC77256.1); DeoR family
YP_005252124.1	similar to Escherichia coli L-lactate dehydrogenase (AAC76629.1)
YP_005252126.1	involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans
YP_005252129.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74504.1); LysR family
YP_005252130.1	similar to Escherichia coli methyl-accepting chemotaxis protein III; ribose and galactose sensor receptor (AAC74503.1)
YP_005252131.1	similar to Escherichia coli alcohol dehydrogenase class III; formaldehyde dehydrogenase; glutathione-dependent (AAC73459.1)
YP_005252132.1	similar to Escherichia coli putative alpha helix chain (AAC73460.1)
YP_005252135.1	secreted effector J (gi|9931614); Salmonella translocated effector; regulated by SPI-2
YP_005252137.1	similar to Escherichia coli putative periplasmic binding transport protein (AAC74987.1)
YP_005252138.1	similar to Escherichia coli putative transport system permease protein; formerly yecC (AAC74985.1); amino acid
YP_005252139.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC76303.1)
YP_005252140.1	similar to Escherichia coli putative transport system permease protein; formerly yecC (AAC74985.1)
YP_005252143.1	B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm
YP_005252145.1	involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain
YP_005252146.1	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds
YP_005252151.1	Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthe
YP_005252152.1	similar to Escherichia coli heat shock protein hslJ (AAC74461.1)
YP_005252155.1	similar to Escherichia coli putative oxidoreductase; Fe-S subunit (AAC74460.1)
YP_005252156.1	similar to Escherichia coli putative filament protein (AAC74458.1)
YP_005252157.1	similar to Escherichia coli methylviologen resistance (AAC73644.1)
YP_005252158.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_005252159.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
YP_005252161.1	similar to Escherichia coli methyl-accepting chemotaxis protein I serine sensor receptor (AAC77311.1); similar to C-terminus of many MCPs
YP_005252162.1	contains putative Smr domain
YP_005252163.1	methylated-DNA protein-cysteine methyltransferase (SW:OGT_SALTY)
YP_005252164.1	Global transcription factor that controls the expression of over 100 target genes in response to anoxia
YP_005252165.1	with UspC and UspD is involved in resistance to UV irradiation
YP_005252170.1	similar to Escherichia coli thiol peroxidase (AAC74406.1)
YP_005252172.1	similar to Escherichia coli putative factor (AAC74304.1); similar to invasin C of Yersinia; intimin
YP_005252176.1	AraC family; helix-turn-helix
YP_005252177.1	similar to Escherichia coli putative oxidoreductase (AAC77206.1)
YP_005252179.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC76546.1); LysR family
YP_005252181.1	similar to Escherichia coli putative transport periplasmic protein (AAC74411.1); negative regulator of mulitple antibiotic resistance
YP_005252182.1	similar to Escherichia coli putative carboxypeptidase (AAC74408.1)
YP_005252183.1	similar to Escherichia coli putative muconate cycloisomerase I (AAC74407.1)
YP_005252184.1	antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein
YP_005252185.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005252186.1	regulates genes involved in the biosynthesis and transport of aromatic amino acids
YP_005252188.1	similar to Escherichia coli putative enzymes (AAC74403.1)
YP_005252189.1	rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide
YP_005252190.1	similar to Escherichia coli phage shock protein (AAC74389.1)
YP_005252191.1	with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock
YP_005252192.1	acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding
YP_005252193.1	involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF
YP_005252194.1	transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor
YP_005252195.1	peptide transport periplasmic protein SapA precursor (SW:SAPA_SALTY); ABC superfamily periplasmic protein
YP_005252196.1	peptide transport system permease protein SapB (SW:SAPB_SALTY); ABC superfamily membrane protein
YP_005252197.1	peptide transport system permease protein SapC (SW:SAPC_SALTY); ABC superfamily membrane protein
YP_005252198.1	peptide transport system atp-binding protein SapD (SW:SAPD_SALTY); ABC superfamily ATP-binding protein
YP_005252199.1	peptide transport system atp-binding protein SapF (SW:SAPF_SALTY); ABC superfamily ATP-binding protein
YP_005252200.1	putative diguanylate cyclase/phosphodiesterase domain 2
YP_005252202.1	putative e6 protein
YP_005252203.1	hypothetical 10.4 kDa protein in fabI/envM 5'region (SW:YCJE_SALTY)
YP_005252204.1	Catalyzes a key regulatory step in fatty acid biosynthesis
YP_005252205.1	similar to Escherichia coli putative oxidoreductase (AAC74369.1)
YP_005252206.1	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
YP_005252207.1	c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP
YP_005252208.1	similar to hypothetical protein SC1698 (Pid: YP_216685.1).
YP_005252209.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC74366.1); DeoR family
YP_005252210.1	osmotically inducible lipoprotein B (SW:OSMB_SALTY); osmotically inducible
YP_005252211.1	involved in start site selection during the initiation of translation
YP_005252212.1	OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_005252213.1	similar to Escherichia coli putative heat shock protein (AAC74362.1)
YP_005252215.1	similar to Escherichia coli non-essential phosphatidylglycerophosphate phosphatase, membrane bound (AAC74360.1)
YP_005252216.1	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate
YP_005252217.1	Catalyzes the conversion of citrate to isocitrate
YP_005252218.1	similar to hypothetical protein SC1709 (Pid: YP_216696.1).
YP_005252219.1	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes
YP_005252220.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_005252222.1	SohB; periplasmic protein; member of the peptidase S49 family
YP_005252223.1	similar to Escherichia coli putative oxidoreductase (AAC74353.1)
YP_005252224.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_005252225.1	catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA
YP_005252226.1	translation factor
YP_005252227.1	TrpH protein (SW:TRPH_SALTY); TrpR controlled transcriptional unit in the 5' upstream region of the trp operon
YP_005252228.1	trp operon leader peptide (SW:LPW_SALTY)
YP_005252229.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_005252230.1	bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-rib
YP_005252231.1	monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate
YP_005252232.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_005252233.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_005252235.1	similar to Escherichia coli putative structural proteins (AAC74340.1)
YP_005252237.1	putative catalase (gi|7162108)
YP_005252238.1	receptor for colicin S4
YP_005252239.1	similar to Escherichia coli putative ferredoxin (AAC73391.1)
YP_005252241.1	Involved in cell division; probably involved in intracellular septation
YP_005252242.1	YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins
YP_005252243.1	membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins
YP_005252244.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_005252245.1	similar to hypothetical protein SeSA_A1872 (Pid: YP_002114771.1).
YP_005252246.1	catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol)
YP_005252247.1	similar to E. coli orf, hypothetical protein(AAC74330.1); Blastp hit to AAC74330.1 (135 aa)
YP_005252249.1	oligopeptide transport ATP-binding protein; OppF (SW:OPPF_SALTY); ABC superfamily ATP-binding protein
YP_005252250.1	oligopeptide transport ATP-binding protein OppD (SW:OPPD_SALTY); ABC superfamily ATP-binding protein
YP_005252251.1	oligopeptide transport system permease protein OppC (SW:OPPC_SALTY); ABC superfamily membrane protein
YP_005252252.1	oligopeptide transport system permease protein OppB (SW:OPPB_SALTY); ABC superfamily membrane protein
YP_005252253.1	periplasmic oligopeptide-binding protein precursor (SW:OPPA_SALTY); ABC superfamily periplasmic protein; contains chaperone properties
YP_005252255.1	similar to Escherichia coli putative channel protein (AAC74324.1); MarC family
YP_005252256.1	similar to Escherichia coli CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase (AAC74323.1); multifunctional alcohol dehydrogenase AdhE
YP_005252257.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_005252258.1	DNA-binding protein H-NS; histone-like protein HLP-II; protein H1; protein B1 (SW:HNS_SALTY); HU; BH2; HD; NS; pleiotropic regulator
YP_005252259.1	together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose
YP_005252260.1	similar to Escherichia coli Hnr protein (AAC74317.1); for protein turnover; involved in mouse virulence
YP_005252263.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_005252264.1	contains TPR repeats
YP_005252265.1	similar to Escherichia coli nitrate reductase 1; cytochrome b(NR); gamma subunit (AAC74311.1)
YP_005252266.1	similar to Escherichia coli nitrate reductase 1; delta subunit; assembly function (AAC74310.1); chaperone required for molybdenum cofactor assembly in nitrate reductase 1
YP_005252267.1	similar to Escherichia coli nitrate reductase 1; FeS; beta subunit (AAC74309.1)
YP_005252268.1	similar to Escherichia coli nitrate reductase 1; alpha subunit (AAC74308.1)
YP_005252269.1	similar to Escherichia coli nitrite extrusion protein (AAC74307.1); MFS superfamily
YP_005252270.1	similar to Escherichia coli nitrate/nitrate sensor histidine protein kinase acts on NarL regulator (AAC74306.1); in two component regulatory system; senses nitrate/nitrite; regulates anaerobic respiration and fermentation
YP_005252271.1	two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase
YP_005252272.1	similar to Escherichia coli putative factor (AAC74304.1)
YP_005252273.1	putative ACR involved in intracellular sulfur reduction
YP_005252274.1	in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions
YP_005252275.1	similar to Escherichia coli sodium-calcium/proton antiporter (AAC74300.1); CaCA family
YP_005252276.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_005252278.1	regulation of invasion genes; (gi|4887121)
YP_005252279.1	HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB
YP_005252280.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_005252281.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tet
YP_005252282.1	Incorporates lipoproteins in the outer membrane after they are released by the LolA protein
YP_005252283.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_005252284.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_005252285.1	putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport
YP_005252286.1	YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function
YP_005252287.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_005252288.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the tra
YP_005252290.1	similar to Escherichia coli hydrogenase-1 small subunit (AAC74057.1)
YP_005252291.1	involved in hydrogen cycling during fermentative growth
YP_005252292.1	similar to Escherichia coli probable Ni/Fe hydrogenase 1 b-type cytochrome subunit (AAC74059.1)
YP_005252293.1	HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1)
YP_005252294.1	involved in processing hydrogenase proteins HyaA and HyaB
YP_005252295.1	similar to Escherichia coli nickel incorporation into hydrogenase-1 proteins (AAC74062.1)
YP_005252296.1	similar to Escherichia coli probable third cytochrome oxidase subunit I (AAC74063.1)
YP_005252297.1	similar to Escherichia coli probable third cytochrome oxidase subunit II (AAC74064.1)
YP_005252298.1	expressed during stationary phase
YP_005252299.1	similar to Escherichia coli NADP-specific glutamate dehydrogenase (AAC74831.1)
YP_005252300.1	periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell
YP_005252303.1	similar to Escherichia coli murein transglycosylase E (AAC74277.1)
YP_005252304.1	catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine
YP_005252305.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_005252306.1	catabolic enzyme, converts L-alanine to D-alanine which is then oxidized to pyruvate by dadA
YP_005252307.1	catalyzes the oxidative deamination of D-amino acids
YP_005252308.1	similar to Escherichia coli putative sporulation protein (AAC74272.1)
YP_005252309.1	Multifunctional regulator of fatty acid metabolism
YP_005252310.1	involved in regulation of intracellular pH under alkaline conditions
YP_005252311.1	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
YP_005252316.1	similar to Escherichia coli putative isomerase (AAC74264.1); FAA
YP_005252318.1	blocks the formation of polar Z-ring septums
YP_005252319.1	ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums
YP_005252320.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_005252321.1	similar to Escherichia coli RNase D; processes tRNA precursor (AAC74874.1)
YP_005252322.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005252323.1	Activates fatty acids by binding to coenzyme A
YP_005252324.1	similar to Escherichia coli putative outer membrane protein (AAC74876.1)
YP_005252326.1	similar to Escherichia coli putative enzyme (AAC74878.1)
YP_005252328.1	hypothetical protein in fadD-pabB intergenic region (SW:YOAH_SALTY)
YP_005252329.1	catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine
YP_005252330.1	hypothetical protein in pabB-sdaA intergenic region (SW:YEAB_SALTY)
YP_005252331.1	similar to Escherichia coli L-serine deaminase (AAC74884.1)
YP_005252333.1	similar to Escherichia coli putative transport protein (AAC74886.1)
YP_005252335.1	similar to Escherichia coli PTS enzyme IIAB; mannose-specific (AAC74887.1)
YP_005252336.1	similar to Escherichia coli PTS enzyme IIC; mannose-specific (AAC74888.1)
YP_005252337.1	hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel
YP_005252338.1	membrane protein YebN
YP_005252339.1	methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth
YP_005252340.1	similar to Escherichia coli septum formation; penicillin-binding protein 3; peptidoglycan synthetase (AAC73195.1)
YP_005252341.1	cold shock-like protein CspC (SW:CSPC_SALTY); multicopy suppresses mukB mutants; putative regulator
YP_005252343.1	putative periplasmic protein
YP_005252346.1	similar to Escherichia coli putative regulator (AAC74897.1); IclR family
YP_005252347.1	similar to Escherichia coli putative transport protein (AAC74898.1)
YP_005252348.1	putative metalloprotease
YP_005252349.1	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3
YP_005252350.1	affects solute and DNA transport through an unknown mechanism
YP_005252351.1	contains putative GAF domain
YP_005252354.1	in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA
YP_005252357.1	Plays a key role in signaling protein misfolding via the cpxR/cpxA transducing system; modulates the phosphorylated status of many phosphoproteins
YP_005252360.1	SopE2 (gi|9651642); invasion-associated protein; secreted by SPI-1; interacts with chaperone InvB; guanine nucleotide exchange factor for Cdc42; activates Cdc42 which results in actin cytoskeleton rearrangements and internalization
YP_005252362.1	similar to hypothetical protein STM1856.1N (Pid: NP_945162.1).
YP_005252366.1	similar to putative transposase (Pid: YP_002637446.1).
YP_005252368.1	similar to E. coli prophage e14 integrase(AAC74224.1); Blastp hit to AAC74224.1 (375 aa)
YP_005252369.1	PagO protein (SW:PAGO_SALTY); PhoPQ-activated gene
YP_005252372.1	similar to E. coli inversion of adjacent DNA; atlocus of e14 element (AAC74242.1); Blastp hit toAAC74242.1 (184 aa)
YP_005252373.1	similar to hypothetical protein SPAB_01328 (Pid: YP_001587571.1).
YP_005252375.1	PhoPQ-activated gene (gi|2582047)
YP_005252376.1	phage tail assembly protein (gi|2460256)
YP_005252381.1	exoVIII; similar to Escherichia coli exonuclease VIII; ds DNA exonuclease; 5'-3' specific (AAC74432.1)
YP_005252382.1	similar to E. coli prophage e14 integrase(AAC74224.1); Blastp hit to AAC74224.1 (375 aa)
YP_005252384.1	putative periplasmic protein
YP_005252385.1	similar to Escherichia coli putative resistance protein (AAC74910.1)
YP_005252386.1	similar to CopC
YP_005252387.1	similar to Escherichia coli DNA polymerase III theta subunit (AAC74912.1)
YP_005252389.1	3'-5' exonuclease activity on single or double-strand DNA
YP_005252390.1	PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues
YP_005252392.1	secreted protein; unknown function
YP_005252393.1	in SOS regulon; dependent on cyclic AMP and H-NS
YP_005252394.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_005252395.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_005252396.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_005252397.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_005252398.1	Represses the expression of the zwf, eda, glp and gap
YP_005252399.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_005252400.1	Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA
YP_005252402.1	involved in transport of zinc(II) with ZnuA and C
YP_005252403.1	involved in transport of zinc(II) with ZnuA and C
YP_005252404.1	involved in transport of zinc(II) with ZnuA and C
YP_005252405.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms
YP_005252406.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_005252408.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by
YP_005252410.1	converts dATP to dAMP and pyrophosphate
YP_005252411.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_005252416.1	similar to Escherichia coli putative enzyme (AAC74941.1)
YP_005252417.1	similar to Escherichia coli copper homeostasis protein (AAC74944.1)
YP_005252419.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_005252420.1	penicillin-binding protein 2; PBP-2 (SW:PBP2_SALTY)
YP_005252422.1	flagellar protein FlhE precursor (SW:FLHE_SALTY)
YP_005252423.1	membrane protein involved in the flagellar export apparatus
YP_005252424.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_005252425.1	cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation
YP_005252426.1	chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble
YP_005252427.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_005252428.1	methylates the MCP
YP_005252429.1	methyl-accepting chemotaxis protein II; MCP-II (SW:MCP2_SALTY); aspartate sensor-receptor
YP_005252430.1	chemotaxis protein CheW (SW:CHEW_SALTY); regulation; couples CheA histidine kinase to transducers
YP_005252431.1	chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component
YP_005252432.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_005252433.1	With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine
YP_005252434.1	With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems
YP_005252435.1	with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems
YP_005252437.1	ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress
YP_005252438.1	similar to Escherichia coli trehalose-6-phosphate synthase (AAC74966.1)
YP_005252439.1	biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature
YP_005252440.1	similar to Escherichia coli 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis (AAC73527.1)
YP_005252441.1	similar to Escherichia coli ferritin-like protein (AAC74972.1)
YP_005252444.1	cytoplasmic iron storage protein
YP_005252446.1	similar to Escherichia coli tyrosine-specific transport system (AAC74977.1); HAAAP family
YP_005252447.1	similar to the C-terminal domain of SecA
YP_005252451.1	similar to Escherichia coli phosphatidylglycerophosphate synthetase/CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyl transferase (AAC74979.1)
YP_005252452.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_005252453.1	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate v
YP_005252456.1	regulates genes involved in cell division
YP_005252457.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC74984.1)
YP_005252458.1	similar to Escherichia coli putative transport system permease protein; formerly yecC (AAC74985.1)
YP_005252459.1	catalyzes the formation of pyruvate from D-cysteine
YP_005252460.1	similar to Escherichia coli putative periplasmic binding transport protein (AAC74987.1)
YP_005252461.1	expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasi
YP_005252462.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_005252463.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005252464.1	N-methylation of lysine residues in flagellin (SW:FLIB_SALTY)
YP_005252465.1	structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes
YP_005252466.1	involved in flagellin assembly
YP_005252467.1	flagellin specific chaperone
YP_005252468.1	binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter
YP_005252469.1	converts 1,4-alpha-D-glucans to maltodextrin
YP_005252470.1	hypothetical 15.5 kDa protein in amyA-fliE intergenic region (SW:YEDD_SALTY)
YP_005252471.1	hypothetical 44.2 kDa protein in amyA-fliE intergenic region (SW:YEDE_SALTY); component of transport system
YP_005252472.1	hypothetical 8.6 kDa protein in amyA-fliE intergenic region; ORF 9 (SW:YEDF_ECOLI)
YP_005252474.1	forms a junction between the M-ring and FlgB during flagella biosynthesis
YP_005252475.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_005252476.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_005252477.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_005252478.1	involved in type III protein export during flagellum assembly
YP_005252479.1	rod/hook and filament chaperone
YP_005252480.1	flagellar hook-length control protein (SW:FLIK_SALTY)
YP_005252481.1	interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_005252482.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_005252483.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_005252484.1	with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus
YP_005252485.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_005252486.1	with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus
YP_005252487.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_005252488.1	positive transcriptional regulator of capsular/exo-polysaccharide synthesis; LuxR/UhpA family (SW:RCSA_SALTY)
YP_005252489.1	similar to hypothetical protein STY2191 (Pid: NP_456544.1).
YP_005252491.1	catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate
YP_005252495.1	similar to Escherichia coli putative transmembrane subunit (AAC75025.1)
YP_005252496.1	similar to Escherichia coli DNA mismatch endonuclease patch repair protein (AAC75026.1); patch repair protein
YP_005252497.1	similar to Escherichia coli DNA cytosine methylase (AAC75027.1)
YP_005252500.1	similar to Escherichia coli putative outer membrane protein (AAC74459.1)
YP_005252501.1	similar to Escherichia coli cold shock-like protein (AAC74625.1)
YP_005252502.1	binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization
YP_005252503.1	binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization
YP_005252509.1	similar to tail fiber protein in phage P2
YP_005252511.1	similar to tail protein (Pid: YP_002117168.1).
YP_005252512.1	similar to tail protein (Pid: YP_002117168.1).
YP_005252513.1	similar to phage protein (Pid: YP_002244021.1).
YP_005252514.1	similar to bacteriophage Mu Gp45 protein (Pid: YP_002216016.1).
YP_005252515.1	similar to bacteriophage Mu P protein (Pid: YP_002115113.1).
YP_005252516.1	similar to tail/DNA circulation protein (Pid: YP_002216017.1).
YP_005252517.1	similar to tail protein (Pid: YP_002216018.1).
YP_005252518.1	similar to hypothetical protein SeSA_A4474 (Pid: YP_002117161.1).
YP_005252519.1	similar to tail tube protein (Pid: YP_002117160.1).
YP_005252520.1	similar to bacteriophage Mu tail sheath protein (Pid: YP_002115118.1).
YP_005252521.1	similar to hypothetical protein SPAB_02157 (Pid: YP_001588373.1).
YP_005252522.1	similar to hypothetical protein SeD_A2261 (Pid: YP_002216023.1).
YP_005252523.1	similar to hypothetical protein SPAB_02159 (Pid: YP_001588375.1).
YP_005252524.1	similar to hypothetical protein SPAB_02160 (Pid: YP_001588376.1).
YP_005252525.1	similar to hypothetical protein SeSA_A2261 (Pid: YP_002115123.1).
YP_005252526.1	similar to hypothetical protein SPAB_02162 (Pid: YP_001588378.1).
YP_005252527.1	similar to phage major capsid protein, HK97 family (Pid: YP_002216028.1).
YP_005252528.1	similar to phage prohead protease, HK97 family (Pid: YP_002115126.1).
YP_005252529.1	similar to putative phage portal protein (Pid: YP_002381789.1).
YP_005252530.1	similar to hypothetical protein SeSA_A2266 (Pid: YP_002115128.1).
YP_005252531.1	similar to putative phage terminase, large subunit (Pid: YP_002216031.1).
YP_005252532.1	similar to hypothetical protein SPAB_02168 (Pid: YP_001588384.1).
YP_005252533.1	similar to hypothetical protein SeD_A0634 (Pid: YP_002214537.1).
YP_005252534.1	bacteriophage ES18 gp15 protein (gi|1143595)
YP_005252537.1	similar to hypothetical protein Ent638_2252 (Pid: YP_001176975.1).
YP_005252539.1	similar to hypothetical protein SeHA_C2478 (Pid: YP_002046294.1).
YP_005252541.1	similar to putative prophage DNA adenine methylase (Pid: YP_003366151.1).
YP_005252545.1	similar to hypothetical protein SC1197 (Pid: YP_216184.1).
YP_005252546.1	similar to hypothetical protein SeD_A2288 (Pid: YP_002216048.1).
YP_005252547.1	similar to phage encoded transcriptional regulator (Pid: YP_002244054.1).
YP_005252549.1	similar to hypothetical protein SeSA_A4442 (Pid: YP_002117129.1).
YP_005252550.1	similar to phage protein (Pid: YP_002244058.1).
YP_005252551.1	similar to hypothetical protein SC0328 (Pid: YP_215315.1).
YP_005252552.1	similar to hypothetical protein SARI_02684 (Pid: YP_001571683.1).
YP_005252553.1	similar to Eaa protein (Pid: YP_002214510.1).
YP_005252554.1	similar to phage protein (Pid: YP_002244063.1).
YP_005252556.1	similar to phage integrase (Pid: YP_002244065.1).
YP_005252560.1	contains TPR repeats
YP_005252562.1	similar to hypothetical protein SPAB_01098 (Pid: YP_001587350.1).
YP_005252563.1	Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile
YP_005252565.1	similar to STM2508 and STM2902
YP_005252566.1	MATE family
YP_005252567.1	protein ErkF/SrfK precursor (SW:ERFK_SALTY)
YP_005252568.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_005252569.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
YP_005252570.1	catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP
YP_005252571.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_005252572.1	with CbiNQ forms the ABC transporter for cobalt import
YP_005252573.1	cobalt transport protein CbiQ (SW:CBIQ_SALTY)
YP_005252574.1	periplasmic cobalt binding component of the cobalt transport system
YP_005252575.1	catalyzes the ATP-dependent transport of cobalt
YP_005252576.1	catalyzes the formation of precorrin-3A from precorrin-2
YP_005252577.1	cobalt chelatase (SW:CBIK_SALTY)
YP_005252578.1	CobK/CbiJ; there are 2 pathways for cobalamin (vitamin B12) production, one aerobic (ex. P. denitrificans), the other anaerobic (ex. S. typhimurium); the CobK/CbiJ perform similar reactions in both; the anaerobic pathway includes the use of a chelated cob
YP_005252579.1	catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine
YP_005252580.1	catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3
YP_005252581.1	precorrin-4 C11-methyltransferase (SW:CBIF_SALTY)
YP_005252582.1	catalyzes the methylation of either C-15 or C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W; decarboxylating
YP_005252583.1	catalyzes the methylation of C-5 in cobalt-precorrin-6Y to form cobalt-precorrin-7W-a
YP_005252584.1	Catalyzes the methylation of C-1 in cobalt-precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A
YP_005252585.1	catalyzes the interconversion of cobalt-precorrin-8X and cobyrinic acid in the anaerobic biosynthesis of cobalamin
YP_005252586.1	CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
YP_005252587.1	responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid
YP_005252588.1	regulatory protein PocR (SW:POCR_SALTY); propanediol utilization protein; AraC family
YP_005252589.1	propanediol diffusion facilitator (SW:PDUF_SALTY); propanediol utilization protein
YP_005252590.1	propanediol utilization protein PduA (SW:PDUA_SALTY); propanediol utilization protein
YP_005252591.1	propanediol utilization protein PduB (SW:PDUB_SALTY); propanediol utilization protein
YP_005252592.1	glycerol dehydratase large subunit (SW:DHAB_SALTY); propanediol utilization protein
YP_005252593.1	propanediol utilization protein
YP_005252594.1	propanediol utilization protein
YP_005252595.1	propanediol utilization protein
YP_005252596.1	propanediol utilization protein
YP_005252597.1	similar to Escherichia coli detox protein (AAC75510.1); propanediol utilization protein
YP_005252598.1	similar to Escherichia coli detox protein (AAC75510.1); propanediol utilization protein
YP_005252601.1	similar to Escherichia coli detox protein (AAC75509.1); propanediol utilization protein
YP_005252602.1	related to B12-dependent glycerol dehydratase
YP_005252603.1	similar to Escherichia coli ethanolamine utilization; similar to acetaldehyde dehydrogenase (AAC75508.1); propanediol utilization protein
YP_005252604.1	similar to Escherichia coli CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase (AAC74323.1); propanediol utilization protein
YP_005252605.1	similar to Escherichia coli putative membrane protein (AAC74701.1); propanediol utilization protein
YP_005252606.1	similar to Escherichia coli detox protein (AAC75510.1); propanediol utilization protein
YP_005252607.1	propanediol utilization protein PduU (SW:PDUU_SALTY); propanediol utilization protein
YP_005252608.1	propanediol utilization protein PduV (SW:PDUV_SALTY)
YP_005252609.1	involved in coenzyme B(12)-dependent 1, 2-propanediol degradation; important for the synthesis of propionyl coenzyme A during growth on 1,2-propanediol
YP_005252611.1	similar to Escherichia coli putative alpha helix protein (AAC75068.1)
YP_005252613.1	similar to DNA gyrase inhibitory protein (SW:GYRI_SALTY)
YP_005252614.1	removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; penicillin-binding protein 6B; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains
YP_005252615.1	membrane-anchoring protein (SW:PHSC_SALTY); hydrogen sulfide production
YP_005252616.1	PhsB (SW:PHSB_SALTY); hydrogen sulfide production; iron-sulfur subunit; electron transfer
YP_005252617.1	membrane-anchoring protein (SW:PHSA_SALTY); hydrogen sulfide production
YP_005252618.1	similar to protein from Salmonella dublin; translocated by SPI-1; type III secretion
YP_005252619.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_005252620.1	similar to Escherichia coli putative amino acid/amine transport protein (AAC75075.1); APC family
YP_005252621.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC75076.1); LysR family
YP_005252622.1	similar to Escherichia coli putative enzyme of sugar metabolism (AAC75077.1)
YP_005252623.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_005252624.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_005252625.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_005252626.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate
YP_005252627.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthe
YP_005252628.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_005252629.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit act
YP_005252630.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynth
YP_005252631.1	chain length determinant protein; polysaccharide antigen chainregulator (SW:WZZB_SALTY); regulator of length of O-antigen component of lipopolysaccharide chains
YP_005252632.1	UDP-glucose 6-dehydrogenase (SW:UDG_SALTY)
YP_005252633.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
YP_005252634.1	undecaprenyl-phosphate galactosephosphotransferase (SW:RFBP_SALTY); mutation results in LPS side chain defect
YP_005252635.1	phosphomannomutase (SW:RFBK_SALTY); LPS side chain defect
YP_005252636.1	mannose-1-phosphate guanylyltransferase GDP (SW:RFBM_SALTY); LPS side chain defect
YP_005252637.1	putative rhamnosyltransferase RfbN (SW:RFBN_SALTY); LPS side chain defect
YP_005252638.1	RFBU protein (SW:RFBU_SALTY); LPS side chain defect
YP_005252639.1	RFBV protein (SW:RFBV_SALTY); LPS side chain defect
YP_005252640.1	putative O-antigen transporter (SW:RFBX_SALTY); LPS side chain defect
YP_005252641.1	CDP-abequose synthase (SW:RFBJ_SALTY); LPS side chain defect
YP_005252642.1	lipopolysaccharide biosynthesis protein RfbH (SW:RFBH_SALTY); LPS side chain defect
YP_005252643.1	CDP-glucose 4,6-dehydratase (SW:RFBG_SALTY); LPS side chain defect
YP_005252644.1	glucose-1-phosphate cytidylyltransferase (SW:RFBF_SALTY); LPS side chain defect
YP_005252645.1	catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose
YP_005252646.1	DTDP-4-dehydrorhamnose 3,5-epimerase (SW:RFBC_SALTY)
YP_005252647.1	glucose-1-phosphate thymidylyltransferase (SW:RFBA_SALTY)
YP_005252648.1	with dTDP-4-dehydrorhamnose 3,5-epimerase forms a complex known as dTDP-L-rhamnose synthetase; catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose
YP_005252649.1	NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose
YP_005252650.1	together with GalU subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose
YP_005252651.1	WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid
YP_005252652.1	putative colanic acid biosynthesis glycosyl transferase WcaL (SW:WCAL_SALTY); in colanic acid gene cluster
YP_005252653.1	similar to Escherichia coli putative galactokinase (AAC75106.1); in colanic acid gene cluster
YP_005252654.1	similar to Escherichia coli probable export protein (AAC75107.1); in colanic acid gene cluster
YP_005252655.1	WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid
YP_005252656.1	phosphomannomutase in colanic acid gene cluster (SW:MANB_SALTY)
YP_005252657.1	mannose-1-phosphate guanylyltransferase; GDP (SW:MANC_SALTY); in colanic acid gene cluster
YP_005252658.1	similar to Escherichia coli putative colanic biosynthesis glycosyl transferase (AAC75111.1); involved in in colanic acid biosynthesis
YP_005252659.1	similar to Escherichia coli GDP-mannose mannosyl hydrolase (AAC75112.1); in colanic acid biosynthesis
YP_005252660.1	similar to Escherichia coli putative nucleotide di-P-sugar epimerase/dehydratase (AAC75113.1); GDP fucose synthetase in colanic acid biosyntheis
YP_005252661.1	similar to Escherichia coli GDP-D-mannose dehydratase (AAC75114.1); colanic acid gene cluster
YP_005252662.1	acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit)
YP_005252663.1	similar to Escherichia coli putative colanic acid biosynthesis glycosyl transferase (AAC75116.1); involved in colanic acid biosynthesis
YP_005252664.1	essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance
YP_005252665.1	similar to Escherichia coli putative glycosyl transferase (AAC75118.1); involved in colanic acid biosynthesis
YP_005252666.1	acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and represse
YP_005252667.1	similar to Escherichia coli putative regulator (AAC75120.1); involved in colanic acid biosynthesis
YP_005252668.1	Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide)
YP_005252669.1	Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis
YP_005252670.1	similar to Escherichia coli putative polysaccharide export protein (AAC75123.1)
YP_005252671.1	similar to Escherichia coli putative transport protein (AAC75124.1)
YP_005252672.1	YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered as
YP_005252673.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_005252674.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
YP_005252675.1	similar to Escherichia coli putative sensor-type protein (AAC75128.1); contains PAS/PAC domain; domain 1/2
YP_005252676.1	similar to Escherichia coli putative heat shock protein (AAC75130.1); Hsp70/DnaK
YP_005252677.1	Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate
YP_005252678.1	Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate
YP_005252679.1	Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate
YP_005252680.1	similar to Escherichia coli putative transport protein (AAC75138.1); MFS family
YP_005252681.1	similar to Escherichia coli sensor protein for BaeR (AAC75139.1); in two-component regulatory system
YP_005252682.1	response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport
YP_005252690.1	cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role
YP_005252691.1	catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate
YP_005252692.1	similar to Escherichia coli putative nucleoside permease protein (AAC75159.1); MFS family
YP_005252694.1	similar to Escherichia coli putative kinase (AAC75161.1)
YP_005252695.1	similar to Escherichia coli putative transcriptional regulator (AAC75162.1); GntR family
YP_005252696.1	catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine
YP_005252697.1	catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP
YP_005252699.1	similar to Escherichia coli putative type-1 fimbrial protein (AAC75169.1)
YP_005252700.1	similar to Escherichia coli putative outer membrane protein (AAC75170.1)
YP_005252701.1	similar to Escherichia coli putative chaperone (AAC75171.1)
YP_005252702.1	similar to Escherichia coli putative fimbrial-like protein (AAC75172.1)
YP_005252704.1	similar to Escherichia coli putative ATPase (AAC75174.1)
YP_005252705.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold
YP_005252707.1	hypothetical 16.9 kDa lipoprotein precursor
YP_005252709.1	unknown function; when overproduced it confers drug-resistance
YP_005252710.1	similar to Escherichia coli putative 2-component sensor protein (AAC75187.1)
YP_005252711.1	similar to Escherichia coli putative transcriptional regulator (AAC75188.1); MerR family
YP_005252713.1	similar to Escherichia coli putative transport system permease protein (AAC75189.1)
YP_005252714.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC75190.1)
YP_005252715.1	similar to Escherichia coli putative transport system permease protein (AAC75191.1)
YP_005252716.1	similar to Escherichia coli putative transport system permease protein (AAC75192.1); putative ABC superfamily binding protein; possibly glycine betaine choline transport for osmoprotection
YP_005252717.1	periplasmic beta-glucosidase precursor (SW:BGLX_SALTY)
YP_005252718.1	component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent
YP_005252719.1	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7
YP_005252721.1	DedA family
YP_005252722.1	similar to Escherichia coli putative oxidoreductase (AAC75198.1)
YP_005252723.1	may be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride
YP_005252725.1	similar to Escherichia coli putative nitrogen regulatory protein (AAC75201.1)
YP_005252726.1	catalyzes the formation of catechol from salicylate
YP_005252727.1	similar to Escherichia coli regulator of transcription; stringent starvation protein A (AAC76261.1)
YP_005252728.1	similar to Escherichia coli putative isomerase (AAC74264.1)
YP_005252730.1	similar to Escherichia coli putative transport protein (AAC73456.1)
YP_005252731.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC74504.1); LysR family
YP_005252733.1	similar to Escherichia coli putative seritonin transporter (AAC75203.1)
YP_005252734.1	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis
YP_005252735.1	similar to Escherichia coli vancomycin sensitivity (AAC75205.1)
YP_005252737.1	similar to glutamate synthase beta subunit and related oxidoreductases which transfer electrons from NADPH to an acceptor protein or protein domain
YP_005252738.1	catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines
YP_005252739.1	ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex
YP_005252740.1	with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains
YP_005252741.1	D-galactose-binding periplasmic protein precursor; GDP; D-galactose/D-glucose binding protein; GGBP (SW:DGAL_SALTY); ABC superfamily periplasmic protein
YP_005252742.1	negative regulator of the mglBAC operon for galactose utilization
YP_005252744.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_005252745.1	similar to Escherichia coli putative esterase (AAC75215.1)
YP_005252747.1	similar to Escherichia coli L-serine deaminase (AAC74884.1)
YP_005252748.1	similar to Escherichia coli 3-phosphoserine phosphatase (AAC77341.1)
YP_005252749.1	similar to Escherichia coli regulator of uhpT (AAC76690.1)
YP_005252750.1	Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein
YP_005252751.1	similar to Escherichia coli lysine-specific permease (AAC75217.1); APC family
YP_005252752.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC75218.1); LysR family
YP_005252754.1	Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues
YP_005252755.1	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group t
YP_005252756.1	converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers
YP_005252757.1	phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then tra
YP_005252758.1	similar to hypothetical protein SPAB_00801 (Pid: YP_001587058.1).
YP_005252759.1	sugar efflux transporter B (SW:SETB_SALTY)
YP_005252762.1	Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein
YP_005252765.1	by similarity, Spr seems to have peptidase activity; involved in thermoresistance
YP_005252766.1	involved in resistance to lambda and N4 phages
YP_005252768.1	similar to Escherichia coli putative transport system permease protein (AAC75239.1)
YP_005252769.1	similar to Escherichia coli putative transport system permease protein (AAC75240.1)
YP_005252770.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC75241.1); contains duplicated ATPase domain
YP_005252772.1	Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance
YP_005252773.1	catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA
YP_005252774.1	similar to Escherichia coli putative ATP-dependent helicase (AAC75245.1)
YP_005252775.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress respo
YP_005252777.1	present in spermidine nucleoids
YP_005252779.1	hypothetical protein in rplY-proL intergenic region (SW:YEJM_SALTY); alkaline phosphatase superfamily
YP_005252780.1	putative peptidase UmuD; similar to Escherichia coli SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC (AAC74267.1)
YP_005252781.1	similar to virulence protein MsgA (SW:MSGA_SALTY); similar to STM1241; ssrB-regulated factor
YP_005252782.1	O-antigen five; acetylation of the O-antigen (LPS)
YP_005252789.1	similar to antiterminator protein Q of phage P5
YP_005252791.1	similar to hypothetical protein SC1204 (Pid: YP_216191.1).
YP_005252792.1	induced by the SPI-2 regulator ssrA/B; secreted by SPI-2
YP_005252794.1	similar to Escherichia coli putative membrane protein (AAC74454.1)
YP_005252795.1	similar to virulence protein MsgA (SW:MSGA_SALTY); similar to STM1241
YP_005252797.1	nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes
YP_005252798.1	similar to Escherichia coli possible subunit of heme lyase (AAC75254.1); involved in cytochrome c-type biogenesis
YP_005252799.1	similar to Escherichia coli disulfide oxidoreductase; biogenesis of cytochrome c (AAC75255.1)
YP_005252800.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocyt
YP_005252801.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocyt
YP_005252802.1	similar to Escherichia coli heme exporter protein C (AAC75258.1); cytochrome c-type biogenesis protein
YP_005252803.1	similar to Escherichia coli heme exporter protein C (AAC75259.1); ABC superfamily membrane protein; cytochrome c-type biogenesis protein
YP_005252804.1	similar to Escherichia coli heme exporter protein B cytochrome c-type biogenesis protein (AAC75260.1); ABC superfamily membrane protein; cytochrome c-type biogenesis protein
YP_005252805.1	ATP-binding protein; required for proper cytochrome c maturation
YP_005252806.1	with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone
YP_005252807.1	small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA
YP_005252808.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA
YP_005252809.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway
YP_005252810.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_005252812.1	Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA.
YP_005252813.1	serine protease inhibitor, inhibits trypsin and other proteases
YP_005252814.1	efflux pump for the antibacterial peptide microcin J25
YP_005252815.1	alkylated DNA repair protein ALKB (SW:ALKB_SALTY); specific for alkylated DNA
YP_005252816.1	ADA regulatory protein; regulatory protein of adaptative response; (SW:ADA_SALTY); AraC/Xyl family
YP_005252817.1	catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the
YP_005252818.1	allows for ions and hydrophilic solutes to cross the outer membrane
YP_005252819.1	similar to Escherichia coli putative 2-component sensor protein (AAC75276.1); regulatory protein
YP_005252820.1	two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF
YP_005252821.1	similar to Escherichia coli sensor for ctr capsule biosynthesis; probable histidine kinase acting on RcsB (AAC75278.1); in two-component regulatory system; regulates colanic capsule biosynthesis
YP_005252822.1	negatively supercoils closed circular double-stranded DNA
YP_005252823.1	similar to Escherichia coli starvation-sensing protein (AAC74653.1)
YP_005252824.1	similar to Escherichia coli putative transport protein (AAC75306.1)
YP_005252825.1	GntR family
YP_005252826.1	Involved in ubiquinone biosynthesis
YP_005252827.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_005252828.1	B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA
YP_005252829.1	plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases
YP_005252830.1	similar to Escherichia coli putative transport (AAC76498.1)
YP_005252831.1	LysR family
YP_005252832.1	hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic
YP_005252833.1	catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell
YP_005252834.1	anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor
YP_005252835.1	sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters
YP_005252836.1	anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate
YP_005252837.1	similar to ElaD; specific cysteine protease which targets ubiquitin and ubiquitin-like proteins covalently bound to target proteins; SseL in Salmonella is required for macrophage killing and virulence, and it is secreted by the salmonella pathogenicity is
YP_005252840.1	similar to Escherichia coli putative transport protein (AAC75306.1); MFS family
YP_005252841.1	similar to Escherichia coli putative racemase (AAC75307.1)
YP_005252842.1	similar to Escherichia coli putative regulator (AAC75308.1)
YP_005252843.1	similar to molybdopterin-biosynthesis
YP_005252845.1	similar to oxidative damage repair enzymes
YP_005252846.1	similar to Escherichia coli protein induced by aluminum (AAC75312.1)
YP_005252847.1	catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose
YP_005252848.1	catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate
YP_005252849.1	Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutan
YP_005252851.1	catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A
YP_005252853.1	similar to Escherichia coli putative transport/receptor protein (AAC75318.1)
YP_005252854.1	polymyxin b resistance protein PmrD (SW:PMRD_SALTY)
YP_005252855.1	O-succinylbenzoic acid-CoA ligase (SW:MENE_SALTY)
YP_005252856.1	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate
YP_005252857.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
YP_005252858.1	catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA
YP_005252859.1	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis
YP_005252860.1	synthesizes isochorismate acid from chorismate
YP_005252863.1	member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; assoc
YP_005252864.1	similar to Escherichia coli positive regulator of CheA protein activity (AAC74957.1)
YP_005252865.1	putative von Willebrand factor; contains vWF type A domain
YP_005252866.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252867.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252868.1	Catalyzes the transfer of electrons from NADH to ubiquinone
YP_005252869.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252870.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252871.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252872.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252873.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252874.1	shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase
YP_005252875.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252876.1	NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of
YP_005252877.1	The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen
YP_005252878.1	Catalyzes the transfer of electrons from NADH to quinone
YP_005252880.1	similar to Escherichia coli NADH dehydrogenase transcriptional regulator; LysR family (AAC75349.1)
YP_005252881.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_005252882.1	similar to Escherichia coli putative alpha helix protein (AAC75351.1); HD superfamily
YP_005252883.1	similar to Escherichia coli putative transport protein (AAC75352.1)
YP_005252884.1	similar to Escherichia coli putative phosphatase (AAC75353.1)
YP_005252887.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_005252888.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_005252889.1	similar to Escherichia coli putative S-transferase (AAC75358.1)
YP_005252890.1	similar to Escherichia coli 1-deoxyxylulose-5-phosphate synthase; flavoprotein (AAC73523.1)
YP_005252891.1	similar to Escherichia coli transketolase 1 isozyme (AAC75972.1)
YP_005252892.1	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
YP_005252894.1	similar to Escherichia coli putative PTS system enzyme II A component (AAC77152.1)
YP_005252895.1	similar to Escherichia coli regulator of gluconate (gnt) operon (AAC76463.1)
YP_005252896.1	similar to Escherichia coli putative regulator (AAC75359.1)
YP_005252899.1	similar to Escherichia coli putative S-transferase (AAC75362.1)
YP_005252900.1	similar to Escherichia coli putative sugar nucleotide epimerase (AAC75364.1)
YP_005252901.1	histidine transport ATP-binding protein HisP (SW:HISP_SALTY); ABC superfamily ATP-binding protein
YP_005252902.1	histidine transport system permease protein HisM (SW:HISM_SALTY); ABC superfamily membrane protein
YP_005252903.1	histidine transport system permease protein HisQ (SW:HISQ_SALTY); ABC superfamily membrane protein
YP_005252904.1	histidine-binding periplasmic protein precursor; HBP (SW:HISJ_SALTY); ABC superfamily binding protein
YP_005252905.1	lysine-arginine-ornithine-binding periplasmic protein precursor; LAO-binding protein (SW:ARGT_SALTY); ABC superfamily binding protein
YP_005252906.1	catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate
YP_005252907.1	similar to Escherichia coli putative amino acid/amine transport protein (AAC73363.1)
YP_005252909.1	similar to Escherichia coli acid sensitivity protein, putative transporter (AAC74565.1)
YP_005252910.1	similar to Escherichia coli diaminopimelate decarboxylase (AAC75877.1)
YP_005252911.1	similar to Escherichia coli response regulator of ato, ornithine decarboxylase antizyme (sensor ATOS) (AAC75280.1)
YP_005252912.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_005252913.1	membrane protein required for colicin V production
YP_005252914.1	similar to Escherichia coli putative lipoprotein (AAC75374.1)
YP_005252915.1	similar to Escherichia coli dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase (AAC75375.1); formylTHF polyglutamate synthase activity
YP_005252916.1	catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits
YP_005252917.1	putative DedA family
YP_005252918.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_005252919.1	similar to Escherichia coli putative PTS system enzyme II A component (AAC75379.1)
YP_005252920.1	catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate
YP_005252921.1	in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein
YP_005252922.1	similar to Escherichia coli putative transport protein (AAC75382.1)
YP_005252924.1	similar to Escherichia coli regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu (AAC76220.1); helix-turn-helix
YP_005252928.1	FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_005252929.1	catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules
YP_005252931.1	similar to Escherichia coli putative transporting ATPase (AAC75386.1)
YP_005252932.1	similar to Escherichia coli putative structural protein (AAC75387.1)
YP_005252933.1	D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm
YP_005252934.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_005252935.1	involved in methylation of ribosomal protein L3
YP_005252936.1	contains putative Smr domain
YP_005252938.1	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase a
YP_005252939.1	FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth
YP_005252941.1	similar to Escherichia coli transport of long-chain fatty acids; sensitivity to phage T2 (AAC75404.1)
YP_005252942.1	similar to Escherichia coli lipoprotein precursor (AAC75406.1)
YP_005252943.1	similar to Escherichia coli putative transport (AAC75407.1)
YP_005252944.1	outer membrane protease; involved in virulence in many organisms; OmpT; IcsP; SopA; Pla; PgtE; omptin; in Escherichia coli OmpT can degrade antimicrobial peptides; in Yersinia Pla activates plasminogen during infection; in Shigella flexneria SopA cleaves
YP_005252945.1	phosphoglycerate transport system transcriptional regulatory protein PgtA (SW:PGTA_SALTY); phosphoglycerate transport
YP_005252946.1	protein for signal transmission; PgtB (SW:PGTB_SALTY); phosphoglycerate transport
YP_005252947.1	protein for signal transmission; PgtC precursor (SW:PGTC_SALTY); phosphoglycerate transport
YP_005252948.1	phosphoglycerate transporter protein (SW:PGTP_SALTY); phosphoglycerate transport
YP_005252950.1	similar to hypothetical protein SPC_1257 (Pid: YP_002636862.1).
YP_005252951.1	Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock
YP_005252952.1	similar to Escherichia coli putative aminotransferase (AAC75438.1)
YP_005252953.1	catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate
YP_005252955.1	similar to Escherichia coli acetolactate synthase III; valine sensitive; large subunit (AAC73188.1); putative thiamine pyrophosphate enzymes
YP_005252956.1	similar to Escherichia coli putative reductase (AAC76037.1)
YP_005252958.1	manganese transport protein MntH (SW:MNTH_SALTY); Nramp family
YP_005252959.1	similar to Escherichia coli permease of transport system for 3 nucleosides (AAC75452.1); NUP family
YP_005252960.1	putative diguanylate cyclase/phosphodiesterase domain 1; diguanylate cyclase/phosphodiesterase domain 2
YP_005252963.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_005252964.1	similar to Escherichia coli regulator for xapA (AAC75458.1); LysR family
YP_005252965.1	similar to hypothetical protein STM2420.1n (Pid: NP_945166.1).
YP_005252966.1	similar to Escherichia coli xanthosine permease (AAC75459.1); MFS superfamily
YP_005252967.1	similar to E. coli xanthosine phosphorylase(AAC75460.1); Blastp hit to AAC75460.1 (277 aa)
YP_005252968.1	similar to Escherichia coli putative sugar hydrolase (AAC75461.1)
YP_005252969.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC75462.1); LysR family
YP_005252970.1	similar to Escherichia coli putative cytochrome oxidase (AAC75463.1)
YP_005252972.1	this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA
YP_005252973.1	interacts with cell division protein FitsZ and may be required to anchor septal ring structure
YP_005252974.1	putative role in sulfur assimilation
YP_005252975.1	CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis
YP_005252976.1	phosphocarrier protein HPR; histidine-containing protein (SW:PTHP_ECOLI); PTS family, Hpr protein
YP_005252977.1	Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport sy
YP_005252978.1	functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose
YP_005252980.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal
YP_005252981.1	putative transcriptional regulator PtsJ (SW:PTSJ_SALTY); GntR family
YP_005252982.1	Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group
YP_005252983.1	hypothetical 13.3 kDa protein in pdxK-cysM intergenic region (SW:YFEK_SALTY)
YP_005252984.1	hypothetical 20.5 kDa protein in pdxK-cysM intergenic region (SW:YFEL_SALTY); penicillin-binding protein
YP_005252985.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_005252986.1	sulfate transport atp-binding protein CYSA (SW:CYSA_SALTY); ABC superfamily ATP-binding protein; chromate resistance
YP_005252987.1	Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import
YP_005252988.1	similar to Escherichia coli sulfate, thiosulfate transport system permease T protein (AAC75477.1); ABC superfamily membrane protein
YP_005252989.1	thiosulfate-binding protein precursor (SW:CYSP_SALTY); ABC superfamily binding protein
YP_005252990.1	similar to Escherichia coli putative oxidoreductase (AAC75479.1)
YP_005252995.1	probable N-acetylmuramoyl-L-alanine amidase AMIA precursor (SW:AMIA_SALTY)
YP_005252996.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_005252997.1	hypothetical protein in eutR-hemF intergenic region; ORF33 (SW:YPFK_SALTY)
YP_005252998.1	hypothetical 30.0 kDa protein in eutR-hemF intergenic region (ORF79) (SW:YPFL_SALTY)
YP_005252999.1	activates the transcription of the ethanolamine utilization operon
YP_005253000.1	ethanolamine utilization protein EutK precursor (SW:EUTK_SALTY)
YP_005253001.1	ethanolamine utilization protein EutL (SW:EUTL_SALTY)
YP_005253002.1	catalyzes the formation of acetaldehyde from ethanolamine
YP_005253003.1	ethanolamine ammonia-lyase heavy chain (SW:EUTB_SALTY)
YP_005253004.1	ethanolamine utilization protein EutA
YP_005253005.1	ethanolamine utilization protein EutH (SW:EUTH_SALTY)
YP_005253006.1	ethanolamine utilization protein EutG (SW:EUTG_SALTY)
YP_005253007.1	EutJ (SW:EUTJ_SALTY); putative heatshock protein 70
YP_005253008.1	invovled in ethanolamine utilization protein EutE (SW:EUTE_SALTY)
YP_005253009.1	involved in ethanolamine utilization protein EutN (SW:EUTN_SALTY)
YP_005253010.1	involved in ethanolamine utilization protein EutM precursor (SW:EUTM_SALTY)
YP_005253011.1	in Salmonella this enzyme is required for ethanolamine catabolism; has higher affinity for CoA than Pta
YP_005253012.1	ethanolamine utilization cobalamin adenosyltransferase (SW:EUTT_SALTY)
YP_005253013.1	ethanolamine utilization protein EutQ (SW:EUTQ_SALTY)
YP_005253014.1	ethanolamine utilization protein EutP (SW:EUTP_SALTY)
YP_005253015.1	ethanolamine utilization protein EutS (SW:EUTS_SALTY)
YP_005253016.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005253017.1	NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate
YP_005253018.1	Maintains the balance of metabolites in the pentose-phosphate pathway
YP_005253019.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo
YP_005253023.1	similar to Escherichia coli putative beta-lactamase (AAC75483.1)
YP_005253024.1	unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic)
YP_005253025.1	similar to Escherichia coli sensor for nitrate reductase system; protein histidine kinase; acts on NarP and narL (AAC75522.1); in two-component regulatory system
YP_005253026.1	similar to Escherichia coli protein that results in sensitivity to acriflavine; integral membrane protein; possible efflux pump (AAC75523.1); RND family
YP_005253028.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is simi
YP_005253032.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_005253033.1	similar to Escherichia coli lipoprotein-34 (AAC75530.1)
YP_005253034.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_005253035.1	negative transcriptional regulator of the gcvTHP operon
YP_005253036.1	bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine
YP_005253038.1	similar to Escherichia coli putative permease (AAC75546.1); PerM family
YP_005253039.1	putative inner membrane or exported protein
YP_005253040.1	similar to Escherichia coli putative oxidoreductase (AAC75548.1)
YP_005253041.1	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP
YP_005253042.1	similar to Escherichia coli uracil transport (AAC75550.1); NCS2 family
YP_005253043.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_005253044.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_005253045.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses format
YP_005253046.1	catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate
YP_005253047.1	similar to Escherichia coli exopolyphosphatase (AAC75555.1)
YP_005253048.1	similar to Escherichia coli putative cytochrome C-type biogenesis protein (AAC75556.1)
YP_005253053.1	similar to STM2011 and STM2902
YP_005253054.1	similar to Escherichia coli IS3 putative transposase (AAC75150.1)
YP_005253055.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_005253056.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_005253057.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_005253058.1	ShdA (gi|5107805); similar to the C-terminal region of AIDA; IcsA; subspecies I-specific; Peyer's patch colonization and shedding factor
YP_005253059.1	RatA (gi|4583529)
YP_005253060.1	SinI (gi|4583530)
YP_005253061.1	SinH (gi|4583531); similar to Escherichia coli intimin and Yersinia pestis invasin proteins
YP_005253063.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows differen
YP_005253064.1	with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis
YP_005253066.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organis
YP_005253067.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_005253068.1	similar to Escherichia coli putative membrane protein (AAC75569.1)
YP_005253069.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_005253070.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_005253071.1	similar to Escherichia coli hydrogenase 4 Fe-S subunit (AAC75541.1)
YP_005253072.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit C (AAC73982.1)
YP_005253073.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit B (AAC73981.1)
YP_005253074.1	similar to Escherichia coli putative oxidoreductase, major subunit (AAC74660.1)
YP_005253075.1	penicillin-insensitive transglycosylase/transpeptidase
YP_005253077.1	catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds
YP_005253079.1	enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I
YP_005253080.1	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide
YP_005253081.1	believed to be involved in assembly of Fe-S clusters
YP_005253082.1	similar to Escherichia coli 2FE-2S ferredoxin, electron carrer protein (AAC75578.1); believed to be involved in assembly of Fe-S clusters
YP_005253083.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_005253084.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
YP_005253085.1	forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein
YP_005253086.1	similar to NifU; involved in Fe-S cluster formation
YP_005253087.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_005253088.1	regulates the expression of the iscRSUA operon
YP_005253089.1	similar to Escherichia coli putative ATP synthase beta subunit (AAC75585.1)
YP_005253090.1	similar to Escherichia coli enhances synthesis of sigma32 in mutant; extragenic suppressor, may modulate RNAse III lethal action (AAC75586.1)
YP_005253091.1	similar to Escherichia coli putative enzyme (AAC75587.1)
YP_005253092.1	anaerobic sulfite reductase subunit A (anaerobic sulfite reductaseiron-sulfur subunit) (SW:ASRA_SALTY)
YP_005253093.1	with AsrAC catalyzes the reduction of sulfite to hydrogen sulfide
YP_005253094.1	anaerobic sulfite reductase subunit C (SW:ASRC_SALTY)
YP_005253096.1	putative periplasmic protein
YP_005253098.1	putative transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters
YP_005253099.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_005253100.1	flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine
YP_005253101.1	regulates the cadBA operon
YP_005253102.1	antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein
YP_005253103.1	lysine decarboxylase; inducible (SW:DCLY_SALTY)
YP_005253104.1	similar to Escherichia coli putative peptide transporter (AAC77091.1); POT family
YP_005253105.1	indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts w
YP_005253106.1	similar to Escherichia coli putative 2-component transcriptional regulator (AAC75607.1); regulator of two-component regulator protein; EBP family
YP_005253107.1	similar to Escherichia coli putative alpha helix protein (AAC75608.1); regulator of two-component regulator protein; EBP familiiy
YP_005253108.1	similar to Escherichia coli putative 2-component sensor protein (AAC75609.1); regulatory protein
YP_005253109.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_005253111.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_005253112.1	similar to Escherichia coli putative deaminase (AAC75612.1)
YP_005253114.1	similar to Escherichia coli putative PTS enzyme II (AAC75482.1)
YP_005253115.1	catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway
YP_005253116.1	putative ABC superfamily membrane protein
YP_005253117.1	catalyzes the formation of 2-dehydropantoate from (R)-pantoate
YP_005253118.1	similar to Escherichia coli putative resistance protein (AAC76571.1)
YP_005253119.1	similar to Escherichia coli cyn operon positive regulator (AAC73441.1); LysR family
YP_005253121.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_005253122.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_005253123.1	involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA
YP_005253124.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested du
YP_005253125.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_005253126.1	catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins
YP_005253127.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_005253128.1	leucine-rich repeat protein
YP_005253129.1	similar to transposase
YP_005253130.1	similar to pagK
YP_005253131.1	phage tail assembly protein (gi|2460256)
YP_005253132.1	phage tail assembly protein (gi|2460256)
YP_005253133.1	similar to Escherichia coli putative membrane protein (AAC74454.1)
YP_005253134.1	similar to hypothetical protein SNSL254_A2795 (Pid: YP_002041853.1).
YP_005253135.1	similar to host specificity protein-J in phage lambda
YP_005253136.1	similar to tail assembly protein I in phage lambda
YP_005253137.1	similar to tail assembly protein K in phage lambda
YP_005253138.1	similar to phage tail component L
YP_005253139.1	similar to lambda phage M tail component (gi|2232363)
YP_005253140.1	similar to lambda phage tail component H (gi|2232364)
YP_005253141.1	similar to minor tail protein
YP_005253142.1	similar to minor tail protein
YP_005253143.1	similar to major tail protein
YP_005253145.1	similar to Escherichia coli putative virulence protein (AAC74514.1)
YP_005253146.1	similar to minor tail protein Z
YP_005253147.1	similar to minor capsid protein FII of phage N15
YP_005253148.1	similar to DNA packaging protein gp9 of phage N14
YP_005253149.1	similar to head protein gp7 of phage 21
YP_005253150.1	similar to head protein gpshp of phage 21
YP_005253151.1	similar to head-tail preconnector gp5 of phage 21; similar to Escherichia coli putative protease (AAC74354.1)
YP_005253152.1	similar to head-tail preconnector gp4 of phage 21
YP_005253153.1	similar to head to tail joining protein
YP_005253154.1	similar to terminase large chain gp2 of N15
YP_005253155.1	similar to DNA packaging protein Nu1 of phage 21; similar to Qin prophage packaging protein NU1 (AAC74621.1)
YP_005253157.1	similar to Escherichia coli bacteriophage lambda endopeptidase (AAC73657.1)
YP_005253158.1	similar to morphogenesis protein of phage B103; similar to Escherichia coli bacteriophage lambda lysozyme (AAC73656.1)
YP_005253161.1	similar to hypothetical protein SNSL254_A2822 (Pid: YP_002041879.1).
YP_005253162.1	similar to antirepressor protein of phage P22
YP_005253163.1	similar to antiterminator Q
YP_005253168.1	similar to T3SS effector protein NleC (Pid: YP_003365223.1).
YP_005253171.1	acts to load the DnaB helicase onto the intiation site durning DNA replication
YP_005253172.1	similar to replication protein 15 (gi|7467283)
YP_005253173.1	similar to cI protein in phage N; probable regulatory protein (gi|7467282)
YP_005253174.1	similar to hypothetical protein CKO_01905 (Pid: YP_001453468.1).
YP_005253175.1	similar to regulatory protein CII (Pid: YP_003297469.1).
YP_005253178.1	similar to exodeoxyribonuclease VIII (gi|7467238)
YP_005253179.1	similar to enterohemolysin 1 in Escherichia coli; hypothetical protein AAC26069.1 (gi|7467267)
YP_005253181.1	similar to excisionase in phage phi-80; probable excisionase (gi|7467278)
YP_005253182.1	similar to integrase in phage (gi|7467280)
YP_005253183.1	involved in the reduction of the SoxR iron-sulfur cluster
YP_005253184.1	periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP
YP_005253185.1	similar to Escherichia coli anti sigma-E/sigma 24 factor; negative regulatory protein (AAC75625.1)
YP_005253186.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate
YP_005253187.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_005253188.1	similar to Escherichia coli putative enzyme (AAC75628.1)
YP_005253189.1	facilitates an early step in the assembly of the 50S subunit of the ribosome
YP_005253190.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC75630.1); LysR family
YP_005253192.1	stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit
YP_005253193.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_005253195.1	similar to Escherichia coli putative thioredoxin-like protein (AAC75635.1); redox factor
YP_005253198.1	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome
YP_005253200.1	similar to Escherichia coli alpha-ketoglutarate permease (AAC75640.1); MFS family
YP_005253202.1	similar to Escherichia coli heat shock protein (AAC75641.1); Hsp 100; part of novel multi-chaperone system with DnaK, DnaJ, and GrpE
YP_005253204.1	responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA
YP_005253205.1	with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline
YP_005253206.1	associated with 30S ribosomal subunit; interferes with translation elongation
YP_005253208.1	catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis
YP_005253210.1	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis
YP_005253211.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_005253214.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_005253215.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_005253216.1	Essential for efficient processing of 16S rRNA
YP_005253217.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_005253218.1	with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins
YP_005253219.1	CorE (gi|4877800); putative cytochrome c-type biogenesis protein; heme exporter protein C
YP_005253220.1	similar to Escherichia coli putative transport protein (AAC75662.1)
YP_005253224.1	catalyzes the phosphorylation of NAD to NADP
YP_005253225.1	similar to Escherichia coli protein used in recombination and DNA repair (AAC75665.1)
YP_005253226.1	similar to Escherichia coli small membrane protein A (AAC75666.1)
YP_005253228.1	lipid transport protein
YP_005253229.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Ca
YP_005253230.1	similar to large repetitive protein (Pid: YP_002143218.1).
YP_005253231.1	similar to Escherichia coli putative resistance protein (AAC73673.1)
YP_005253232.1	similar to Escherichia coli ATP-binding transport protein; multicopy suppressor of htrB (AAC74000.1)
YP_005253234.1	similar to Escherichia coli prophage CP4-57 integrase (AAC75670.1)
YP_005253240.1	excinuclease
YP_005253243.1	similar to Escherichia coli regulatory factor of maltose metabolism; similar to Ner repressor protein of phage Mu (AAC76220.1)
YP_005253244.1	similar to Escherichia coli PTS system glucitol/sorbitol-specific IIC component; one of two (AAC75744.1)
YP_005253245.1	similar to Escherichia coli PTS system glucitol/sorbitol-specific enzyme IIA component (AAC75746.1)
YP_005253246.1	similar to Escherichia coli PTS system glucitol/sorbitol-specific IIB component and second of two IIC components (AAC75745.1)
YP_005253247.1	similar to Escherichia coli putative dehydrogenase (AAC74397.1)
YP_005253249.1	similar to Escherichia coli probable hexulose-6-phosphate synthase (AAC77153.1)
YP_005253252.1	similar to Escherichia coli putative transport protein (AAC73180.1)
YP_005253256.1	similar to E. coli prophage CP4-57 integrase(AAC75670.1); Blastp hit to AAC75670.1 (413 aa)
YP_005253260.1	superfamily I
YP_005253262.1	similar to Escherichia coli IS3 putative transposase (AAC75150.1)
YP_005253263.1	repressor of fliC (SW:FLJA_SALTY); flagellar synthesis
YP_005253264.1	structural flagella protein; individual Salmonella serotypes usually alternate between the production of 2 antigenic forms of flagella, termed phase 1 and phase 2, each specified by separate structural genes
YP_005253265.1	DNA-invertase hin (SW:HIN_SALTY); regulation of flagellar gene expression by site-specific H inversion of DNA
YP_005253266.1	related to UDP-glucuronosyltransferase
YP_005253267.1	similar to Escherichia coli ATP-binding transport protein; multicopy suppressor of htrB (AAC74000.1)
YP_005253268.1	similar to Escherichia coli enterochelin esterase (AAC73686.1); Fes
YP_005253269.1	alpha/beta superfamily
YP_005253270.1	Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space
YP_005253272.1	PipB2; similar to STM1088; contains pentapeptide repeats; secreted by SPI-2 type III secretion; localizes to Salmonella-containing vacuole and host cell membranes
YP_005253273.1	similar to Escherichia coli putative enzyme (AAC73964.1); similar to virK in Shigella
YP_005253275.1	similar to putative inner membrane protein (Pid: YP_002115736.1).
YP_005253277.1	similar to Escherichia coli putative 2-component sensor protein (AAC76062.1); tricarboxylic transport
YP_005253278.1	transcriptional regulatory protein TctD (SW:TCTD_SALTY); tricarboxylic transport
YP_005253282.1	in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms h
YP_005253283.1	catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate
YP_005253284.1	catalyzes the formation of succinate from succinate semialdehyde; NADP dependent
YP_005253285.1	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
YP_005253286.1	similar to Escherichia coli transport permease protein of gamma-aminobutyrate (AAC75710.1); APC family; RpoS dependent
YP_005253287.1	regulator of gab gene expression
YP_005253288.1	putative LysM domain
YP_005253289.1	YqaE family
YP_005253290.1	ArsR family
YP_005253292.1	similar to hypothetical protein SPAB_03475 (Pid: YP_001589655.1).
YP_005253293.1	DNA-binding protein STPA (SW:STPA_SALTY); has chaperone activity
YP_005253297.1	similar to Escherichia coli putative regulator (AAC77296.1); GntR family
YP_005253299.1	glutaredoxin-like protein NrdH (SW:NRDH_SALTY); hydrogen donor
YP_005253300.1	in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF
YP_005253301.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_005253302.1	B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE
YP_005253303.1	with ProWX is involved in the high-affinity uptake of glycine betaine
YP_005253304.1	with ProVX is involved in the high-affinity uptake of glycine betaine
YP_005253305.1	with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine
YP_005253306.1	similar to Escherichia coli putative transport protein (AAC75728.1)
YP_005253307.1	DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB
YP_005253308.1	similar to Escherichia coli multidrug resistance secretion protein (AAC75732.1)
YP_005253309.1	similar to Escherichia coli multidrug resistance; probably membrane translocase (AAC75733.1); MFS family
YP_005253311.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
YP_005253312.1	involved in the first step of glutathione biosynthesis
YP_005253314.1	YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent
YP_005253315.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_005253316.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_005253317.1	binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities
YP_005253318.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_005253320.1	membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan
YP_005253321.1	similar to Escherichia coli PTS system; one of two glucitol/sorbitol-specific components (AAC75744.1); PTS family
YP_005253322.1	similar to Escherichia coli PTS system; one of two glucitol/sorbitol-specific components (AAC75745.1); PTS family
YP_005253323.1	phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group t
YP_005253324.1	catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate
YP_005253325.1	regulator for glucitol utilization
YP_005253326.1	regulates genes involved in glucitol utilization
YP_005253327.1	catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate
YP_005253328.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_005253329.1	detoxifies nitric oxide using NADH
YP_005253330.1	catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase
YP_005253331.1	similar to Escherichia coli transcriptional regulatory protein (AAC75754.1)
YP_005253332.1	involved in electron transport from formate to hydrogen
YP_005253333.1	putative periplasmic protein
YP_005253334.1	involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE
YP_005253335.1	similar to Escherichia coli processing of large subunit HycE of hydrogenase 3; part of the FHL complex (AAC75760.1)
YP_005253336.1	similar to Escherichia coli hydrogenase (AAC75761.1)
YP_005253337.1	electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released
YP_005253338.1	similar to Escherichia coli large subunit of hydrogenase 3; part of FHL complex (AAC75763.1)
YP_005253339.1	similar to Escherichia coli membrane-spanning protein of hydrogenase 3; part of FHL complex (AAC75764.1)
YP_005253340.1	catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3)
YP_005253341.1	similar to Escherichia coli probable small subunit of hydrogenase-3; iron-sulfur protein; part of FHL complex (AAC75766.1)
YP_005253342.1	regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon
YP_005253343.1	plays a role in hydrogenase nickel cofactor insertion
YP_005253344.1	GTP hydrolase involved in nickel liganding into hydrogenases
YP_005253345.1	HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase
YP_005253346.1	similar to Escherichia coli pleiotrophic effects on 3 hydrogenase isozymes (AAC75771.1)
YP_005253347.1	similar to Escherichia coli protein which plays a structural role in maturation of all 3 hydrogenases (AAC75772.1)
YP_005253348.1	formate hydrogenlyase transcriptional activator for fdhF, hyc and hyp operons EBP family (SW:FHLA_SALTY)
YP_005253350.1	SitA (gi|5231094); Salmonella iron transporter; Fur-regulated
YP_005253351.1	SitB (gi|5231095); Salmonella iron transporter; Fur-regulated
YP_005253352.1	SitC (gi|5231096); Salmonella iron transporter; Fur-regulated
YP_005253353.1	SitD (gi|5231097); Salmonella iron transporter; Fur-regulated
YP_005253354.1	invasion protein; inhbits activation of key proinflammatory transcription factor NF-kappaB
YP_005253355.1	transcriptional regulator SprB (gi|5007028)
YP_005253356.1	SprA; HilC (gi|4455106); helix-turn-helix protein; AraC family; activator for invasion genes; derepresses hilA expression
YP_005253358.1	oxygen-regulated invasion protein OrgB (SW:ORGB_SALTY); putative flagellar biosynthesis/type III secretion apparatus
YP_005253359.1	oxygen-regulated invasion protein OrgA (SW:ORGA_SALTY); putative flagellar biosynthesis/type III secretion apparatus
YP_005253360.1	PrgK protein precursor (SW:PRGK_SALTY); cell invasion protein; interacts with PrgH and forms oligomeric rings; type III secretion apparatus
YP_005253361.1	PrgJ protein (SW:PRGJ_SALTY); invasion protein; may cap needle complex; type III secretion apparatus
YP_005253362.1	PrgI protein (SW:PRGI_SALTY); invasion protein; type III secretion apparatus
YP_005253363.1	PrgH protein (SW:PRGH_SALTY); invasion protein; interacts with PrgK; tetarmerizes; with PrgK forms multimeric ring-shaped structures; type III secretion apparatus
YP_005253364.1	HilD (gi|4455108); helix-turn-helix proteins; AraC family; activator for invasion genes; derepresses hilA expression
YP_005253365.1	Activates the expression of invasion genes and activates the expression of prgHIJK which is part of the pathogenicity island 1 type III secretion system
YP_005253366.1	invasion associated gene protein IagB precursor (SW:IAGB_SALTY)
YP_005253367.1	protein tyrosine phosphatase SptP (gi|1519054); translocated protein; type III secretion; antagonizes bacterial-encoded exchange factors SopE and SopE2 by interfering with stimulation of Cdc42 and Rac1; binds Rac1
YP_005253368.1	SicP (gi|3283218); virulence protein; chaperone for SptP; type III secretion
YP_005253370.1	carries the fatty acid chain in fatty acid biosynthesis
YP_005253371.1	Salmonella invasion protein SipA (gi|1172128); binds actin and promotes polymerization; results in membrane ruffling and internalization due to cytoskeleton rearrangements
YP_005253372.1	cell invasion protein SspD protein (gi|7443300); involved in translocating secreted proteins to host cells; translocon; type III secretion
YP_005253373.1	cell invasion protein SspC (gi|7443298); involved in translocating secreted proteins to host cell; translocon; type III secretion; inserted into host cell plasma membrane; interacts with SipC
YP_005253374.1	cell invasion protein SspB (gi|975295); involved in translocating secreted proteins to host cell; translocon; type III secretion; inserted into host cell plasma membrane; interacts with SipB
YP_005253375.1	surface presentation of antigens protein SpaT (SW:SPAT_SALTY); surface presentation of antigens; secretory proteins; partitioning factor for SipB/C; prevents premature association of SipB/C; regulates several promoters with InvF
YP_005253376.1	Required for surface presentation of invasion plasmid antigens; required for invasion and for secretion of the three ipa proteins
YP_005253377.1	surface presentation of antigens protein SpaR (SW:SPAR_SALTY); inner membrane secretory protein; type III secretion apparatus
YP_005253378.1	surface presentation of antigens protein SpaQ (SW:SPAQ_SALTY); inner membrane secretory protein; type III secretion apparatus
YP_005253379.1	part of a type III secretory system probably involved in invasion into eukaryotic cells
YP_005253380.1	involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells
YP_005253381.1	surface presentation of antigens protein SpaN (SW:SPAN_SALTY); surface presentation of antigens; secretory proteins
YP_005253382.1	surface presentation of antigens protein SpaM (SW:SPAM_SALTY); secretory proteins; type III secretion apparatus
YP_005253383.1	Invasion protein InvC; necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase
YP_005253384.1	surface presentation of antigens protein SpaK (SW:SPAK_SALTY); secretory protein; chaperone for SopE/SopE2; type III secretion
YP_005253385.1	invasion protein InvA (SW:INVA_SALTY); inner membrane protein; type III secretion apparatus
YP_005253386.1	invasion protein InvE (SW:INVE_SALTY); interacts with SecA-SipB/C complex; essential for translocation into host cells
YP_005253387.1	InvG protein precursor (SW:INVG_SALTY); forms ring-shaped structure in outer membrane; requires InvH for stability; type III secretion apparatus
YP_005253388.1	invasion protein InvF (SW:INVF_SALTY); SPI-1 transcription factor; activated by HilA; requires SicA as a co-factor; controls sigD/sopB, sopE and sicAsipBCDA genes
YP_005253389.1	invasion protein InvH precursor (SW:INVH_SALTY); stabilizes InvG secretin; type III secretion apparatus
YP_005253391.1	similar to STM2011 and STM2508
YP_005253396.1	similar to Escherichia coli protein phosphatase 2 (AAC75776.1)
YP_005253398.1	This protein performs the mismatch recognition step during the DNA repair process
YP_005253400.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73313.1); LysR family
YP_005253401.1	similar to Escherichia coli putative transport protein (AAC75782.1)
YP_005253402.1	similar to Escherichia coli UDP-galactose-4-epimerase (AAC73846.1)
YP_005253404.1	similar to Escherichia coli putative epimerase/aldolase (AAC75780.1)
YP_005253406.1	similar to Escherichia coli putative dehydrogenase (AAC75778.1)
YP_005253407.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAC75777.1); DeoR family
YP_005253408.1	similar to Escherichia coli transcriptional regulator for cryptic hemolysin (AAC74714.1)
YP_005253409.1	similar to Escherichia coli 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (AAC75371.1)
YP_005253410.1	similar to Escherichia coli putative oxidoreductase (AAC76846.1)
YP_005253412.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses
YP_005253413.1	outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus
YP_005253414.1	catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins
YP_005253415.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_005253416.1	catalyzes the modification of U13 in tRNA(Glu)
YP_005253417.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_005253418.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthes
YP_005253419.1	forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein
YP_005253420.1	similar to Escherichia coli putative cytochrome oxidase subunit (AAC75791.1)
YP_005253421.1	converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis
YP_005253422.1	may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; p
YP_005253423.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_005253424.1	catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3
YP_005253433.1	hypothetical 36.1 kDa protein in cysH 3'region (ORF4) (SW:YGCC_SALTY); secreted by SPI-1; type III secretion
YP_005253434.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_005253435.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_005253436.1	catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity
YP_005253437.1	similar to Escherichia coli putative 6-pyruvoyl tetrahydrobiopterin synthase (AAC75807.1)
YP_005253438.1	beta-lactamase superfamily II
YP_005253439.1	putative organic radical activating enzymes
YP_005253440.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_005253441.1	CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_005253442.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus
YP_005253443.1	contains CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
YP_005253444.1	(p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP
YP_005253445.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_005253446.1	part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system
YP_005253448.1	similar to Escherichia coli putative glucarate dehydratase (AAC75829.1)
YP_005253449.1	similar to Escherichia coli putative glucarate dehydratase (AAC75830.1)
YP_005253450.1	similar to Escherichia coli putative transport protein (AAC75831.1); MFS family
YP_005253451.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_005253452.1	catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp
YP_005253454.1	putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function
YP_005253455.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_005253457.1	similar to Escherichia coli probable serine transporter (AAC75838.1); HAAAP family
YP_005253458.1	similar to Escherichia coli L-serine dehydratase; deaminase; L-SD2 (AAC75839.1)
YP_005253459.1	has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups
YP_005253460.1	similar to Escherichia coli L-1,2-propanediol oxidoreductase (AAC75841.1)
YP_005253461.1	catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate
YP_005253462.1	similar to L-fucose:H+ symporter permease (Pid: YP_002115928.1).
YP_005253463.1	catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose
YP_005253464.1	similar to Escherichia coli L-fuculokinase (AAC75845.1)
YP_005253465.1	similar to Escherichia coli protein of fucose operon (AAC75846.1)
YP_005253466.1	regulates expression of genes involved in L-fucose utilization
YP_005253469.1	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence
YP_005253472.1	similar to SufE
YP_005253474.1	similar to Escherichia coli putative enzyme (AAC75854.1)
YP_005253475.1	membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues
YP_005253476.1	similar to Escherichia coli putative amidase (AAC75856.1)
YP_005253477.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_005253478.1	helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity
YP_005253479.1	helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity
YP_005253480.1	similar to Escherichia coli protease III (AAC75860.1)
YP_005253481.1	catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination
YP_005253482.1	similar to Escherichia coli prepilin peptidase dependent protein C (AAC75862.1); putative component involved type IV pilin biogenesis
YP_005253484.1	similar to Escherichia coli prepilin peptidase dependent protein B (AAC75864.1); putative component involved in type IV pilin biogenesis
YP_005253485.1	similar to Escherichia coli prepilin peptidase dependent protein A (AAC75865.1); putative component innvolved in type IV pilin biogenesis
YP_005253486.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_005253487.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_005253488.1	member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr
YP_005253489.1	hydrolyzes diadenosine polyphosphate
YP_005253490.1	MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair
YP_005253491.1	similar to Escherichia coli putative transport protein (AAC75871.1); integral membrane protein
YP_005253492.1	POT family
YP_005253493.1	complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH
YP_005253494.1	similar to Escherichia coli putative resistance protein (AAC75874.1)
YP_005253495.1	Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by t
YP_005253496.1	controls transcription of galETKM
YP_005253497.1	similar to Escherichia coli ascBF operon repressor (AAC75756.1)
YP_005253498.1	catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding
YP_005253499.1	activates the transcription of the lysA gene encoding diaminopimelate decarboxylase
YP_005253500.1	similar to Escherichia coli putative resistance proteins (AAC75879.1)
YP_005253501.1	similar to Escherichia coli low-affinity L-arabinose transport system proton symport protein (AAC75880.1); MFS family
YP_005253502.1	catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate
YP_005253503.1	4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
YP_005253504.1	Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and
YP_005253505.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73606.1); LysR family
YP_005253507.1	similar to Escherichia coli putative transporter protein (AAC75884.1)
YP_005253509.1	membrane protein conferring nickel and cobalt resistance
YP_005253510.1	similar to transcriptional regulator SprB (gi|5007028)
YP_005253511.1	similar to hypothetical protein STM3025.1N (Pid: NP_945169.1).
YP_005253513.1	similar to Escherichia coli putative chaperone (AAC73811.1)
YP_005253514.1	similar to Escherichia coli putative membrane protein (AAC76082.1)
YP_005253515.1	similar to Escherichia coli putative fimbrial-like protein (AAC73813.1)
YP_005253517.1	similar to Escherichia coli outer membrane protein X (AAC73901.1)
YP_005253518.1	stability determinant protein
YP_005253522.1	similar to Escherichia coli putative lipoprotein (AAC75903.1)
YP_005253523.1	catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate
YP_005253524.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA
YP_005253525.1	peptide chain release factor 2; RF-2 (SW:RF2_SALTY)
YP_005253526.1	5'-3' single-stranded-DNA-specific exonuclease
YP_005253527.1	DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity
YP_005253528.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d
YP_005253529.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic
YP_005253532.1	physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and t
YP_005253533.1	similar to Escherichia coli putative oxidoreductase (AAC75937.1)
YP_005253535.1	similar to Escherichia coli 6-phospho-beta-glucosidase A; cryptic (AAC75939.1)
YP_005253537.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_005253538.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P t
YP_005253539.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_005253541.1	Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone
YP_005253542.1	exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide
YP_005253543.1	the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown
YP_005253545.1	ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function
YP_005253546.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_005253547.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_005253548.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_005253549.1	putative periplasmic immunogenic protein
YP_005253550.1	Involved in the export of arginine
YP_005253551.1	participates in the regulation of osmotic pressure changes within the cel
YP_005253552.1	catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate
YP_005253553.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_005253554.1	NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate
YP_005253557.1	CbiQ and related transporter
YP_005253558.1	similar to Escherichia coli ATP-binding component of putrescine transport system (AAC73942.1)
YP_005253559.1	similar to Escherichia coli ATP-binding component of sulfate permease A protein; chromate resistance (AAC75475.1)
YP_005253560.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo
YP_005253561.1	contains putative chaperone function
YP_005253562.1	catalyzes the formation of putrescine from agmatine
YP_005253565.1	similar to Escherichia coli putative malate dehydrogenase (AAC73619.1)
YP_005253566.1	similar to Escherichia coli putative oxidoreductase (AAC77314.1)
YP_005253567.1	similar to Escherichia coli putative oxidoreductase (AAC75233.1)
YP_005253568.1	similar to Escherichia coli regulator for uxu operon (AAC77280.1); GntR family
YP_005253570.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_005253572.1	similar to E. coli orf, hypothetical protein(AAC75977.1); Blastp hit to AAC75977.1 (71 aa)
YP_005253574.1	methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_005253575.1	similar to Escherichia coli galactose-proton symport of transport system (AAC75980.1); MFS family
YP_005253577.1	similar to Escherichia coli DNA-specific endonuclease I (AAC75982.1)
YP_005253578.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_005253579.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_005253581.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_005253583.1	similar to Escherichia coli putative protein transport (AAC75987.1); may be involved in type II secretion
YP_005253584.1	putative enzyme with a TIM-barrel fold
YP_005253585.1	similar to Escherichia coli putative resistance protein (AAC75989.1)
YP_005253587.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_005253588.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_005253589.1	similar to Escherichia coli putative alpha helix chain (AAC75993.1)
YP_005253590.1	catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis
YP_005253593.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_005253594.1	A/G-specific adenine glycosylase (SW:MUTY_SALTY)
YP_005253596.1	Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues
YP_005253597.1	similar to Escherichia coli ornithine decarboxylase isozyme (AAC76002.1)
YP_005253598.1	similar to Escherichia coli putative transport protein (AAC76003.1)
YP_005253600.1	similar to Escherichia coli putative coenzyme A transferase (AAC75957.1)
YP_005253601.1	similar to Escherichia coli putative aldehyde dehydrogenase (AAC74469.1)
YP_005253602.1	similar to Escherichia coli citrate lyase beta chain; acyl lyase subunit (AAC73717.1); LysR family
YP_005253603.1	putative transcriptional regulator (gi|5852589); LysR family
YP_005253604.1	similar to Escherichia coli putative sulfatase (AAC74571.1)
YP_005253605.1	similar to Escherichia coli putative arylsulfatase regulator (AAC76803.1)
YP_005253606.1	similar to Escherichia coli putative regulator (AAC76545.1); contains CheY-like receiver domain and HTH DNA-binding domain
YP_005253608.1	similar to Escherichia coli proline permease transport protein (AAC73505.1)
YP_005253610.1	similar to Escherichia coli probable oxidoreductase (AAC74383.1)
YP_005253611.1	similar to Escherichia coli phenylacetaldehyde dehydrogenase (AAC74467.1)
YP_005253612.1	inhibitor of RssB activity in response to DNA damage; blocks degradation of stationary phase sigma factor RpoS
YP_005253616.1	similar to Escherichia coli transport of hexuronates (AAC76128.1)
YP_005253617.1	catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate
YP_005253618.1	similar to Escherichia coli D-mannonate oxidoreductase (AAC77279.1)
YP_005253619.1	catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism
YP_005253620.1	similar to Escherichia coli methyl-accepting chemotaxis protein I; serine sensor receptor (AAC77311.1)
YP_005253621.1	catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction
YP_005253622.1	YghU; B2989; one of eight putative glutathione transferase proteins from E. coli
YP_005253625.1	similar to Escherichia coli hydrogenase-2 chaperone-like protein; may effect maturation of large subunit of hydrogenase-2 (AAC76026.1)
YP_005253626.1	plays a role in hydrogenase nickel cofactor insertion
YP_005253627.1	similar to Escherichia coli member of hyb operon (AAC76028.1)
YP_005253628.1	protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC)
YP_005253629.1	involved in hydrogen uptake
YP_005253630.1	HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits
YP_005253631.1	Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2
YP_005253632.1	involved in hydrogen uptake
YP_005253634.1	similar to Escherichia coli methyl-accepting chemotaxis protein I; serine sensor receptor (AAC77311.1)
YP_005253639.1	similar to Escherichia coli putative oxidoreductase (AAC76039.1)
YP_005253640.1	membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell
YP_005253641.1	membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell
YP_005253643.1	catalyzes the formation of L-homocysteine from cystathionine
YP_005253644.1	hypothetical protein in metC 3'region (SW:YGHB_SALTY); DedA family
YP_005253645.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC76046.1); AraC/XylS family
YP_005253646.1	similar to Escherichia coli putative oxidoreductase (AAC76047.1)
YP_005253647.1	methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate
YP_005253648.1	similar to Escherichia coli putative membrane pump protein (AAC73857.1)
YP_005253649.1	Ap4A
YP_005253650.1	similar to hypothetical protein SPC_3240 (Pid: YP_002638766.1).
YP_005253651.1	putative FeS oxidoreductase family 2
YP_005253652.1	similar to Escherichia coli putative solute-binding transport protein (AAC76603.1)
YP_005253654.1	hypothetical 46.1 kDa protein in plsC 3'region (SW:YGIK_SALTY); integral membrane protein
YP_005253655.1	SufI protein precursor (SW:SUFI_SALTY); putative periplasmic protein
YP_005253656.1	1-acyl-SN-glycerol-3-phosphate acyltransferase (SW:PLSC_SALTY)
YP_005253657.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_005253658.1	AraC family; helix-turn-helix
YP_005253660.1	response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes
YP_005253661.1	similar to Escherichia coli putative 2-component sensor protein (AAC76062.1); regulatory protein
YP_005253662.1	similar to Escherichia coli modulator of drug activity B (AAC76064.1); drug modulator
YP_005253664.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_005253665.1	Displays esterase activity toward palmitoyl-CoA and pNP-butyrate
YP_005253666.1	similar to Escherichia coli regulator of lacZ (AAC76068.1)
YP_005253667.1	similar to Escherichia coli putative enzyme (AAC76069.1)
YP_005253668.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_005253669.1	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell
YP_005253671.1	similar to Escherichia coli putative synthetase/amidase (AAC76074.1)
YP_005253672.1	seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine
YP_005253674.1	similar to hypothetical protein SPC_3265 (Pid: YP_002638791.1).
YP_005253676.1	thiol-disulfide isomerase and thioredoxin
YP_005253678.1	DHBP synthase; functions during riboflavin biosynthesis
YP_005253680.1	Involved in glycogen synthesis. May be involved in glycogen priming
YP_005253681.1	similar to Escherichia coli putative oxidoreductase (AAC76086.1)
YP_005253682.1	similar to Escherichia coli putative membrane protein (AAC76087.1)
YP_005253683.1	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose
YP_005253684.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_005253686.1	contains putative SH3 domain protein
YP_005253687.1	catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the pro
YP_005253688.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_005253689.1	catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin
YP_005253690.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_005253691.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteur
YP_005253692.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_005253693.1	synthesizes RNA primers at the replication forks
YP_005253694.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria
YP_005253698.1	similar to Escherichia coli methyl-accepting chemotaxis protein I; serine sensor receptor (AAC77311.1)
YP_005253699.1	similar to Escherichia coli aerotaxis sensor receptor; flavoprotein (AAC76107.1); senses cellular redox state or proton motive force
YP_005253700.1	catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate
YP_005253701.1	similar to Escherichia coli putative NADPH dehydrogenase (AAC76116.1)
YP_005253702.1	similar to Escherichia coli putative enzyme (AAC76119.1)
YP_005253706.1	similar to Escherichia coli putative transport protein (AAC76123.1)
YP_005253707.1	involved in the import of serine and threonine coupled with the import of sodium
YP_005253708.1	DedA family
YP_005253715.1	similar to Escherichia coli putative transferase (AAC76137.1)
YP_005253716.1	similar to Escherichia coli putative cytochrome (AAC76138.1)
YP_005253717.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC76140.1); LysR family
YP_005253721.1	similar to Escherichia coli putative transport system permease protein (AAC76145.1); HAAAP family
YP_005253722.1	similar to Escherichia coli L-serine dehydratase; deaminase L-SD2 (AAC75839.1)
YP_005253723.1	similar to Escherichia coli probable formate acetyltransferase 3 (AAC76149.1)
YP_005253724.1	catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism
YP_005253725.1	involved in the import of threonine and serine in combination with the import of a proton
YP_005253726.1	catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic
YP_005253727.1	regulates the tdcABCDEFG operon which is involved in amino acid degradation
YP_005253729.1	catalyzes the reduction of tartronate semialdehyde to glycerate
YP_005253730.1	cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate
YP_005253731.1	similar to Escherichia coli putative hydrolase (AAC76162.1)
YP_005253732.1	similar to Escherichia coli ribokinase (AAC76775.1); ribokinase family
YP_005253733.1	similar to Escherichia coli putative DeoR-type transcriptional regulator of Aga operon (AAC76165.1); DeoR family
YP_005253734.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_005253735.1	similar to Escherichia coli 6-phosphofructokinase II; suppressor of pfkA (AAC74793.1)
YP_005253736.1	Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate
YP_005253737.1	similar to Escherichia coli split galactitol utilization operon repressor (AAC75148.1)
YP_005253739.1	similar to Escherichia coli putative glycosylase (AAC76181.1)
YP_005253741.1	Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein
YP_005253742.1	similar to Escherichia coli putative periplasmic protein (AAC76184.1)
YP_005253747.1	putative ABC superfamily membrane protein
YP_005253749.1	similar to Escherichia coli putative collagenase (AAC76192.1)
YP_005253751.1	similar to Escherichia coli putative enzyme (AAC76194.1)
YP_005253754.1	tryptophan transporter of high affinity
YP_005253755.1	participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division
YP_005253756.1	lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing
YP_005253757.1	similar to Escherichia coli polynucleotide phosphorylase; cytidylate kinase activity (AAC76198.1); member of mRNA degradosome
YP_005253758.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_005253759.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_005253760.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_005253761.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_005253762.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_005253763.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_005253764.1	catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis
YP_005253766.1	similar to Escherichia coli protein export; membrane protein (AAC76207.1); IISP family; auxillary membrane component
YP_005253767.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_005253768.1	catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate
YP_005253769.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005253770.1	inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins
YP_005253771.1	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit
YP_005253772.1	RNA binding protein found associated to pre-50S subunit of the ribosome; putative role in ribosome assembly; necessary for optimal growth but not cell viability
YP_005253773.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary com
YP_005253774.1	similar to hypothetical protein SeSA_A3490 (Pid: YP_002116248.1).
YP_005253775.1	penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chain
YP_005253776.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_005253777.1	similar to hypothetical protein STY3481 (Pid: NP_457681.1).
YP_005253778.1	involved in the peptidyltransferase reaction during translation
YP_005253779.1	similar to Escherichia coli 50S ribosomal subunit protein L21 (AAC76218.1)
YP_005253780.1	similar to Escherichia coli octaprenyl diphosphate synthase (AAC76219.1)
YP_005253781.1	activator of maltose metabolism genes
YP_005253782.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_005253783.1	BolA family
YP_005253784.1	putative STAS domain
YP_005253785.1	putative ABC superfamily
YP_005253786.1	putative ABC superfamily binding protein
YP_005253787.1	putative ABC superfamily membrane protein
YP_005253788.1	ATP-binding subunit of a putative ABC toluene efflux transporter
YP_005253789.1	YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers
YP_005253790.1	similar to Escherichia coli putative isomerase (AAC76229.1); polysialic acid capsule expression protein
YP_005253791.1	forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis
YP_005253793.1	LptA; periplasmic binding protein part of a putative ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system
YP_005253794.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC76233.1); putative ABC superfamily ATP-binding protein
YP_005253795.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizo
YP_005253796.1	YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigm
YP_005253797.1	similar to Escherichia coli phosphotransferase system enzyme IIA; regulates N metabolism (AAC76236.1)
YP_005253798.1	putative kinase; contains putative P-loop
YP_005253799.1	similar to Escherichia coli phosphocarrier protein HPr-like NPr; nitrogen-related; exchanges phosphate with Enzyme I Hpr (AAC76238.1)
YP_005253801.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_005253802.1	similar to Escherichia coli sigma cross-reacting protein 27A (AAC76241.1); SCRP-27A
YP_005253803.1	sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA
YP_005253805.1	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate
YP_005253806.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_005253808.1	similar to Escherichia coli cytosine permease/transport (AAC73439.1)
YP_005253809.1	Catalyzes the deamination of cytosine to uracil and ammonia
YP_005253811.1	catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein
YP_005253812.1	Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate
YP_005253813.1	similar to Escherichia coli sialic acid transporter (AAC76256.1); MFS family
YP_005253814.1	catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid
YP_005253815.1	Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization
YP_005253816.1	similar to Escherichia coli stringent starvation protein B (AAC76260.1)
YP_005253817.1	transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation
YP_005253819.1	forms a direct contact with the tRNA during translation
YP_005253820.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_005253823.1	similar to Escherichia coli serine endoprotease (AAC76266.1)
YP_005253824.1	similar to Escherichia coli protease (AAC76267.1)
YP_005253825.1	similar to STM0063
YP_005253826.1	oxaloacetate decarboxylase beta chain (SW:DCOB_SALTY)
YP_005253827.1	catalyzes the formation of pyruvate from oxaloacetate
YP_005253828.1	catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide
YP_005253829.1	Involved in the tartrate degradation pathway
YP_005253830.1	Involved in the tartrate degradation pathway
YP_005253831.1	similar to Escherichia coli putative transport protein (AAC75352.1)
YP_005253832.1	GntR family
YP_005253833.1	GntR family
YP_005253834.1	oxidizes malate to oxaloacetate
YP_005253835.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_005253839.1	with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate
YP_005253840.1	with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate
YP_005253841.1	membrane protein AaeX; the gene is a member of the aaeXAB operon
YP_005253842.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC76275.1); LysR family
YP_005253843.1	responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA
YP_005253845.1	involved in the processing of the 5'end of 16S rRNA
YP_005253846.1	Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell
YP_005253847.1	part of cell wall structural complex MreBCD; transmembrane component
YP_005253848.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_005253849.1	functions in MreBCD complex in some organisms
YP_005253850.1	regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules
YP_005253851.1	similar to Escherichia coli putative dehydrogenase (AAC76285.1)
YP_005253852.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_005253853.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_005253854.1	composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_005253855.1	an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism
YP_005253857.1	mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase
YP_005253858.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_005253859.1	putative TIM-barrel enzyme; hypothetical 35.9 kDa protein in pmrA-fis intergenic region (SW:YHDG_SALTY)
YP_005253860.1	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription
YP_005253861.1	similar to Escherichia coli putative methyltransferase (AAC76294.1)
YP_005253863.1	membrane domain involved in; diguanylate cyclase/phosphodiesterase domain 1; diguanylate cyclase/phosphodiesterase domain 2
YP_005253864.1	similar to Escherichia coli putative transcriptional regulator (AAC76296.1); regulator for envCD; acrEF; TetR/AcrR family
YP_005253865.1	similar to Escherichia coli transmembrane protein affects septum formation and cell membrane permeability (AAC76297.1)
YP_005253866.1	similar to Escherichia coli integral transmembrane protein; acridine resistance protein F (AAC76298.1); RND family
YP_005253868.1	similar to Escherichia coli putative transferase (AAC76304.1)
YP_005253870.1	catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_005253871.1	RimN; YrdC; required for maturation of 16s RNA; binds preferentially double stranded RNA
YP_005253872.1	similar to Escherichia coli putative DNA topoisomerase (AAC76308.1)
YP_005253874.1	similar to Escherichia coli orf; fragment 1 (AAC76311.1); putative protein involved in DNA uptake
YP_005253875.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_005253876.1	modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth
YP_005253877.1	catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase
YP_005253878.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_005253879.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_005253881.1	mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators
YP_005253883.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_005253884.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_005253885.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic
YP_005253886.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_005253887.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_005253888.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc io
YP_005253889.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_005253890.1	late assembly protein
YP_005253891.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_005253892.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_005253893.1	binds 5S rRNA along with protein L5 and L25
YP_005253894.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resist
YP_005253895.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_005253896.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are prese
YP_005253897.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_005253898.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_005253899.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_005253900.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_005253901.1	one of the stabilizing components for the large ribosomal subunit
YP_005253902.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_005253903.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_005253904.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase
YP_005253905.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_005253906.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_005253907.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_005253908.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_005253909.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_005253910.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in
YP_005253911.1	similar to Escherichia coli leader peptidase; integral membrane protein (AAC76360.1)
YP_005253912.1	iron storage protein
YP_005253913.1	regulatory or redox component complexing with Bfr in iron storage and mobility (SW:BFD_SALTY)
YP_005253914.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promot
YP_005253915.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_005253916.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_005253917.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the oth
YP_005253918.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_005253919.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_005253920.1	in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs
YP_005253922.1	rotamase
YP_005253923.1	similar to Escherichia coli host factor for lysis of phiX174 infection (AAC76373.1)
YP_005253924.1	rotamase
YP_005253926.1	involved in potassium efflux
YP_005253927.1	required for KefB activity
YP_005253928.1	similar to Escherichia coli putative ATP-binding component (AAC76377.1); contains duplicated ATPase domain
YP_005253929.1	similar to putative ATPase component of ABC transporter with duplicated ATPase domain (Pid: YP_002047483.1).
YP_005253931.1	alpha/beta-hydrolase fold
YP_005253933.1	similar to Escherichia coli probable phosphoribulokinase (AAC76380.1)
YP_005253935.1	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons
YP_005253937.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxo
YP_005253938.1	aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity
YP_005253939.1	cell filamentation protein Fic (SW:FIC_SALTY); stationary phase induced gene; affects cell division
YP_005253940.1	hypothetical 6.8 kDa protein in fic-ppiA intergenic region (SW:YHFG_SALTY)
YP_005253941.1	peptidyl-prolyl cis-trans isomerase A (SW:PPIA_SALTY); rotamase A
YP_005253942.1	similar to Escherichia coli putative transport (AAC76389.1); MFS family
YP_005253943.1	similar to Escherichia coli nitrite reductase-NAD(P)H subunit (AAC76390.1)
YP_005253944.1	involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations
YP_005253945.1	member of the FNT family of formate and nitrite transporters
YP_005253946.1	multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin fro
YP_005253947.1	putative surface-exposed virulence protein BigA (gi|5081595)
YP_005253948.1	transposase for insertion sequence element is200 (SW:T200_SALTY)
YP_005253950.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_005253951.1	catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate
YP_005253952.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
YP_005253953.1	DNA adenine methylase (SW:DMA_SALTY)
YP_005253954.1	similar to Escherichia coli putative membrane protein; overproduction may interfere with cell division (AAC76413.1)
YP_005253955.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_005253956.1	type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_005253957.1	outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeru
YP_005253962.1	bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the f
YP_005253963.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_005253964.1	similar to Escherichia coli putative dehydrogenase (AAC76423.1)
YP_005253965.1	similar to Escherichia coli putative phosphatase (AAC76424.1)
YP_005253966.1	predicted small RNA-binding protein
YP_005253967.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone prot
YP_005253968.1	similar to Escherichia coli putative transport (AAC76427.1)
YP_005253969.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_005253970.1	membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR
YP_005253971.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of o
YP_005253972.1	necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary com
YP_005253974.1	similar to Escherichia coli ferrous iron transport protein A (AAC76433.1)
YP_005253975.1	cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake
YP_005253978.1	Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis
YP_005253979.1	involved in high-affinity gluconate transport
YP_005253980.1	cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source
YP_005253981.1	similar to Escherichia coli high-affinity transport of gluconate/gluconate permease (AAC76440.1); GntP family; GNT I system
YP_005253982.1	amylomaltase; acts to release glucose from maltodextrins
YP_005253983.1	similar to Escherichia coli maltodextrin phosphorylase (AAC76442.1)
YP_005253984.1	Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides
YP_005253986.1	similar to Escherichia coli damage-inducible protein J (AAC73330.1)
YP_005253987.1	catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester
YP_005253990.1	similar to Escherichia coli putative 2-component regulator (AAC76447.1); sigma N; sigma 54-dependent regulator of rtcBA expression; EBP family
YP_005253991.1	represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism
YP_005253992.1	protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity
YP_005253993.1	belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine
YP_005253994.1	in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the
YP_005253997.1	forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone
YP_005253998.1	similar to hypothetical protein SPAB_04385 (Pid: YP_001590534.1).
YP_005253999.1	similar to Escherichia coli putative dehydratase (AAC73372.1)
YP_005254000.1	similar to Escherichia coli putative lyase/synthase (AAC73371.1)
YP_005254001.1	similar to Escherichia coli putative regulator (AAC75308.1)
YP_005254002.1	similar to Escherichia coli glycogen phosphorylase (AAC76453.1)
YP_005254003.1	catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose
YP_005254004.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_005254005.1	catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen
YP_005254006.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_005254007.1	catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde
YP_005254008.1	similar to E. coli orf, hypothetical protein(AAC76459.1); Blastp hit to AAC76459.1 (197 aa)
YP_005254009.1	similar to Escherichia coli low-affinity gluconate transport permease protein, interrupted (AAC76461.1)
YP_005254010.1	thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate
YP_005254011.1	similar to Escherichia coli regulator of gluconate operon (AAC76463.1); gntUKR (GalR/LacI familiy
YP_005254013.1	similar to Escherichia coli putative regulator (AAC76465.1)
YP_005254014.1	YhhY; regulated by the fur regulator; unknown function
YP_005254015.1	ORF408 (gi|4456874); regulator of sugar metabolism
YP_005254016.1	ORF 245 (gi|4456875); similar to STM1381
YP_005254018.1	similar to Escherichia coli putative hydrolase (AAC76404.1)
YP_005254019.1	periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptid
YP_005254021.1	hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate
YP_005254022.1	part of the UgpABCE glycerol-3-phosphate uptake system
YP_005254023.1	with UgpABC is involved in uptake of glycerol-3-phosphate
YP_005254024.1	with UgpEC is involved in the uptake of glycerol-3-phosphate
YP_005254025.1	with UgpACE is involved in the uptake of glycerol-3-phosphate
YP_005254026.1	similar to death-on-curing protein of phage P1
YP_005254027.1	hypothetical protein in livF 5'region (SW:YHHV_SALTY)
YP_005254028.1	with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_005254029.1	Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_005254030.1	Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine
YP_005254031.1	LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter
YP_005254032.1	leucine-specific binding protein precursor; LS-BP (SW:LIVK_SALTY); ABC superfamily binding protein
YP_005254035.1	leu/ile/val/thr-binding protein precursor; LIVT-BP (SW:LIVJ_SALTY); ABC superfamily binding protein
YP_005254036.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_005254037.1	putative ABC transporter, membrane protein
YP_005254038.1	putative ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions
YP_005254039.1	signal recognition protein receptor; functions in the targeting and insertion of membrane proteins
YP_005254040.1	catalyzes the methylation of 16S rRNA at position G966
YP_005254042.1	similar to Escherichia coli putative receptor (AAC76492.1)
YP_005254043.1	similar to Escherichia coli putative enzyme (AAC76493.1)
YP_005254044.1	P-type ATPase involved in the export of lead, cadmium, zinc and mercury
YP_005254045.1	methyl-accepting chemotaxis citrate transducer (citrate chemoreceptorprotein) (SW:MCPC_SALTY)
YP_005254046.1	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs
YP_005254049.1	similar to Escherichia coli putative transport (AAC76498.1); MFS family
YP_005254050.1	PerM family
YP_005254052.1	Inhibits transcription at high concentrations of nickel
YP_005254053.1	similar to Escherichia coli putative transporter (AAC76510.1); putative ABC superfamily; ATP-binding/membrane transport protein
YP_005254054.1	similar to Escherichia coli putative ATP-binding component of a transport system; fragment 1 (AAC76511.1); permease component
YP_005254055.1	similar to Escherichia coli putative membrane protein (AAC76512.1)
YP_005254057.1	similar to Escherichia coli low-affinity phosphate transport (AAC76518.1); PiT family
YP_005254058.1	ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress
YP_005254059.1	similar to Escherichia coli universal stress protein; broad regulatory function (AAC76520.1)
YP_005254060.1	member of the POT family of peptide transporters; probable proton-dependent peptide transporter function
YP_005254061.1	predicted SAM-dependent methyltransferase
YP_005254062.1	oligopeptidase A (SW:OPDA_SALTY)
YP_005254065.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_005254066.1	similar to Escherichia coli periplasmic L-asparaginase II (AAC75994.1)
YP_005254067.1	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB
YP_005254068.1	similar to Escherichia coli putative kinase (AAC76399.1); ribokinase family
YP_005254069.1	similar to Escherichia coli putative transport protein (AAC76396.1)
YP_005254070.1	similar to Escherichia coli putative transcriptional regulator (AAC76400.1); GntR family
YP_005254071.1	cytoplasmic; catalyzes the hydrolysis of trehalose to glucose
YP_005254074.1	similar to Escherichia coli putative regulator (AAC76545.1); LuxR/UhpA family
YP_005254075.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC76546.1); LysR family
YP_005254077.1	similar to Escherichia coli putative transport protein (AAC76548.1); MFS family
YP_005254079.1	in Escherichia coli this protein is involved in flagellar function
YP_005254080.1	similar to Escherichia coli ketodeoxygluconokinase (AAC76551.1)
YP_005254081.1	protein YhjJ precursor (SW:YHJJ_SALTY)
YP_005254082.1	involved in the transport of C4-dicarboxylates across the membrane
YP_005254083.1	HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; similar to a putative p
YP_005254084.1	cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA
YP_005254085.1	catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans
YP_005254086.1	binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP)
YP_005254087.1	polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis
YP_005254090.1	similar to Escherichia coli putative protease (AAC76561.1)
YP_005254093.1	similar to hypothetical protein SPAB_04503 (Pid: YP_001590651.1).
YP_005254095.1	similar to Escherichia coli putative transporter protein (AAC76564.1); HAAAP family
YP_005254096.1	Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides
YP_005254097.1	DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF
YP_005254098.1	similar to Escherichia coli dipeptide transport system permease protein 2 (AAC76567.1); ABC superfamily membrane protein
YP_005254099.1	transports peptides consisting of two or three amino acids
YP_005254100.1	similar to Escherichia coli dipeptide transport protein (AAC76569.1); ABC superfamily periplasmic protein
YP_005254101.1	similar to Escherichia coli putative permease (AAC75926.1)
YP_005254102.1	contains putative PQQ enzyme repeat
YP_005254103.1	similar to Escherichia coli regulator for rbs operon (AAC76776.1); LacI family
YP_005254104.1	catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide
YP_005254105.1	PFE protein precursor (SW:LPFE_SALTY)
YP_005254106.1	outer membrane usher protein LpfC precursor (SW:LPFC_SALTY)
YP_005254107.1	chaperone protein LpfB precursor (SW:LPFB_SALTY)
YP_005254108.1	long polar fimbrial protein A precursor (SW:LPFA_SALTY)
YP_005254109.1	similar to Escherichia coli putative lipase (AAC76572.1)
YP_005254110.1	constitutive, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine
YP_005254112.1	similar to Escherichia coli biotin sulfoxide reductase (AAC76575.1)
YP_005254113.1	similar to Escherichia coli putative outer membrane protein (AAC76576.1)
YP_005254114.1	Involved in the metabolism of aromatic amino acids
YP_005254117.1	cold shock protein CspA (SW:CSPA_SALTY); 7.4 kDa; transcriptional activator of hns
YP_005254122.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the
YP_005254123.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of t
YP_005254127.1	similar to Escherichia coli xylulokinase (AAC76588.1)
YP_005254128.1	catalyzes the interconversion of D-xylose to D-xylulose
YP_005254129.1	similar to Escherichia coli putative regulator of xyl operon (AAC76593.1); AraC/XylS family
YP_005254130.1	similar to Escherichia coli putative ATP-binding protein (AAC76594.1)
YP_005254131.1	periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds
YP_005254132.1	transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis
YP_005254134.1	similar to Escherichia coli putative regulator (AAC76598.1); IclR family
YP_005254135.1	NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate
YP_005254136.1	similar to Escherichia coli putative lipase (AAC76600.1)
YP_005254137.1	similar to CheA
YP_005254138.1	membrane-spanning protein involved in uptake of 2,3-diketo-L-gulonate; part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO
YP_005254139.1	similar to Escherichia coli putative membrane protein (AAC76602.1); DedA family
YP_005254140.1	similar to Escherichia coli putative solute-binding transport protein (AAC76603.1)
YP_005254141.1	similar to Escherichia coli L-xylulose kinase (AAC76604.1); cryptic
YP_005254142.1	catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate
YP_005254143.1	L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate
YP_005254144.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC76936.1); AraC family; helix-turn-helix
YP_005254146.1	similar to Escherichia coli aldehyde dehydrogenase B; lactaldehyde dehydrogenase (AAC76612.1)
YP_005254147.1	similar to Escherichia coli possible NagC-like transcriptional regulator (AAC73497.1)
YP_005254148.1	similar to Escherichia coli selenocysteinyl-tRNA-specific translation factor (AAC76614.1)
YP_005254149.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_005254150.1	similar to Escherichia coli putative S-transferase (AAC76616.1)
YP_005254151.1	similar to Escherichia coli PTS system; mannitol-specific enzyme IIABC components (AAC76623.1); PTS family
YP_005254152.1	similar to Escherichia coli mannitol-1-phosphate dehydrogenase (AAC76624.1)
YP_005254153.1	Acts as a repressor of the mtlAD operon
YP_005254157.1	similar to Escherichia coli putative membrane protein (AAC74454.1)
YP_005254158.1	similar to Escherichia coli L-lactate permease (AAC76627.1)
YP_005254159.1	represses the lctPRD operon
YP_005254160.1	flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration
YP_005254161.1	member of the SPOUT superfamily of RNA methyltransferases; no methyltransferase activity observed with certain tRNA substrates
YP_005254162.1	similar to Escherichia coli L-idonate transcriptional regulator (AAC77221.1)
YP_005254163.1	similar to Escherichia coli starvation-sensing protein (AAC74653.1); muconate lactonizing enzyme family
YP_005254164.1	similar to Escherichia coli putative transport protein (AAC75831.1)
YP_005254165.1	catalyzes the O-acetylation of serine
YP_005254166.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_005254167.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_005254168.1	similar to Escherichia coli glutaredoxin 3 (AAC76634.1)
YP_005254170.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_005254171.1	similar to Escherichia coli putative membrane protein (AAC76637.1)
YP_005254173.1	similar to Escherichia coli putative regulator (AAC76639.1)
YP_005254174.1	converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism
YP_005254175.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
YP_005254176.1	catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose
YP_005254177.1	catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core
YP_005254178.1	lipopolysaccharide heptosyltransferase-1 (SW:RFAC_SALTY)
YP_005254179.1	O-antigen ligase (SW:RFAL_SALTY)
YP_005254180.1	lipopolysaccharide 1,2-N-acetylglucosaminetransferase (SW:RFAK_SALTY); lipopolysaccharide core biosynthetic protein
YP_005254181.1	lipopolysaccharide core biosynthetic protein RfaZ (SW:RFAZ_SALTY)
YP_005254182.1	lipopolysaccharide core biosynthesis protein RfaY (SW:RFAY_SALTY); modification of heptose region of the core
YP_005254183.1	UDP-D-glucose/galactosyl; lipopolysaccharide 1,2-glucosyltransferase (SW:RFAJ_SALTY)
YP_005254184.1	UDP-D-galactose/glucosyl; lipopolysaccharide 1,3-galactosyltransferase (SW:RFAI_SALTY)
YP_005254185.1	UDP-D-galactose/(glucosyl; lipopolysaccharide 1,6-galactosyltransferase (SW:RFAB_SALTY)
YP_005254186.1	hypothetical 9.0 kDa protein in rfaB-rfaP intergenic region (SW:YIBR_SALTY)
YP_005254187.1	lipopolysaccharide core biosynthetic protein RfaP (SW:RFAP_SALTY); phosphorylation of core heptose
YP_005254188.1	similar to Escherichia coli glucosyltransferase I; lipopolysaccharide core biosynthesis (AAC76655.1)
YP_005254189.1	similar to Escherichia coli lipopolysaccharide core biosynthetic protein (AAC76656.1); modification of heptose region of core
YP_005254190.1	catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A
YP_005254191.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_005254192.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_005254193.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of th
YP_005254194.1	required for 70S ribosome assembly
YP_005254195.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_005254196.1	catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine
YP_005254197.1	catalyzes the formation of dUMP from dUTP
YP_005254198.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_005254199.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_005254200.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_005254201.1	similar to Escherichia coli putative alpha helix protein (AAC76668.1)
YP_005254202.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73730.1); LysR family
YP_005254203.1	similar to glyoxylases
YP_005254204.1	catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol
YP_005254205.1	this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+
YP_005254206.1	Essential for recycling GMP and indirectly, cGMP
YP_005254207.1	promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_005254208.1	similar to Escherichia coli (p)ppGpp synthetase II; also guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (AAC76674.1)
YP_005254209.1	specifically modifies tRNA at position G18
YP_005254210.1	catalyzes branch migration in Holliday junction intermediates
YP_005254212.1	similar to Escherichia coli glutamate transport (AAC76677.1); GltS family
YP_005254213.1	similar to Escherichia coli putative transport protein (AAC76678.1); NCS2 family
YP_005254215.1	catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xy
YP_005254216.1	may be involved in the transport of galactosides-pentoses-hexuronides
YP_005254218.1	similar to putative ATP binding protein SugR (gi|4324607)
YP_005254219.1	similar to putative ATP binding protein SugR (gi|4324607)
YP_005254220.1	RhuM (gi|4324608)
YP_005254221.1	RmbA (gi|4324609)
YP_005254222.1	MisL (gi|4324610); similar to AIDA-I autotransporter; member of IgA1 family of proteases; outer membrane protein
YP_005254223.1	FidL (gi|4324611)
YP_005254224.1	putative transcriptional regulator MarT (gi|4324612); similar to Vibrio cholerae ToxR
YP_005254225.1	Pathogenicity island encoded protein: SPI3
YP_005254226.1	SlsA (gi|4324613); similar to STM0950
YP_005254227.1	CigR (gi|4324614)
YP_005254228.1	Mg(2+) transport ATPase, P-type 2 (SW:ATMB_SALTY); cotranscribed with mgtC
YP_005254229.1	Mg(2+) transport ATPase protein C (SW:ATMC_SALTY); reqired for intracmacrophage survival and growth in low calcium; cotranscribed with mgtB and transcriptionally controlled by PhoP/PhoQ system
YP_005254230.1	hypothetical protein in selC 3'region (SW:YICL_SALTY); integral membrane protein
YP_005254233.1	L-seryl-tRNA selenium transferase
YP_005254234.1	similar to Escherichia coli PTS enzyme IID; mannose-specific (AAC74889.1)
YP_005254235.1	similar to Escherichia coli PTS system N-acetylgalactosamine-specific IIC component 1 (AAC76173.1)
YP_005254236.1	similar to Escherichia coli PTS enzyme IIAB, mannose-specific (AAC74887.1)
YP_005254238.1	similar to Escherichia coli psp operon transcriptional activator (AAC74385.1); NtrC family; contains ATPase domain
YP_005254240.1	similar to Escherichia coli 6-phospho-beta-glucosidase; cryptic (AAC75758.1)
YP_005254241.1	experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS
YP_005254243.1	helix-turn-helix
YP_005254244.1	similar to Escherichia coli PTS system protein HPr (AAC75468.1)
YP_005254245.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_005254246.1	similar to Escherichia coli L-fuculokinase (AAC75845.1); pentulose and hexulose
YP_005254247.1	similar to Escherichia coli PTS system galactitol-specific enzyme IIC (AAC75153.1)
YP_005254248.1	similar to Escherichia coli galactitol-specific enzyme IIB of phosphotransferase system (AAC75154.1)
YP_005254249.1	similar to Escherichia coli galactitol-specific enzyme IIA of phosphotransferase system (AAC75155.1)
YP_005254250.1	similar to Escherichia coli transcriptional regulator of succinylCoA synthetase operon (AAC73824.1); GntR family
YP_005254252.1	cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate
YP_005254253.1	membrane protein regulates uhpT expression
YP_005254254.1	Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph
YP_005254255.1	response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter
YP_005254257.1	similar to Escherichia coli fucose permease (AAC75843.1)
YP_005254258.1	similar to Escherichia coli ribokinase (AAC76775.1); ribokinase family
YP_005254259.1	similar to Escherichia coli transcriptional repressor for deo operon, tsx, nupG (AAC73927.1); DeoR family
YP_005254260.1	with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity
YP_005254261.1	catalyzes the formation of 2-acetolactate from pyruvate
YP_005254262.1	similar to Escherichia coli ilvB operon leader peptide (AAC76695.1)
YP_005254265.1	multidrug efflux protein involved in adaptation to low energy shock
YP_005254267.1	regulates the synthesis and expression of the dsdXA operon and dadA gene
YP_005254268.1	member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function
YP_005254269.1	catalyzes the formation of pyruvate from serine
YP_005254270.1	similar to Escherichia coli putative transcriptional regulator (AAC76697.1)
YP_005254273.1	similar to Escherichia coli putative transport protein (AAC76708.1)
YP_005254274.1	16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent
YP_005254275.1	with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress
YP_005254278.1	similar to Escherichia coli possible subunit of heme lyase (AAC75254.1); involved in cytochrome c-type biogenesis
YP_005254279.1	similar to Escherichia coli disulfide oxidoreductase; biogenesis of cytochrome c (AAC75255.1)
YP_005254280.1	similar to Escherichia coli cytochrome c-type biogenesis protein (AAC75256.1)
YP_005254281.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocyt
YP_005254282.1	similar to Escherichia coli heme exporter protein C (AAC75258.1); cytochrome c-type biogenesis protein
YP_005254283.1	similar to Escherichia coli heme exporter protein C (AAC75259.1); ABC superfamily membrane protein; cytochrome c-type biogenesis protein
YP_005254284.1	similar to Escherichia coli heme exporter protein B cytochrome c-type biogenesis protein (AAC75260.1); ABC superfamily membrane protein; cytochrome c-type biogenesis protein
YP_005254285.1	ATP-binding protein; required for proper cytochrome c maturation
YP_005254286.1	similar to Escherichia coli putative cytochrome C peroxidase (AAC76543.1)
YP_005254287.1	TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor
YP_005254288.1	similar to Escherichia coli trimethylamine N-oxide reductase subunit (AAC74082.1)
YP_005254289.1	similar to Escherichia coli trimethylamine N-oxide reductase; cytochrome c-type subunit (AAC74081.1); also has activity as negativer regulator of tor operon
YP_005254290.1	response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes
YP_005254291.1	periplasmic sensory protein associated with the TorRS two-component regulatory system
YP_005254292.1	Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide
YP_005254293.1	similar to Escherichia coli D-galactonate transport (AAC76714.1); MFS family
YP_005254294.1	similar to Escherichia coli 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratase (AAC76715.1)
YP_005254295.1	similar to 2-dehydro-3-deoxy-6-phosphogalactonate aldolase (Pid: YP_218733.1).
YP_005254296.1	similar to Escherichia coli 2-oxo-3-deoxygalactonate kinase (AAC76716.1)
YP_005254297.1	similar to Escherichia coli regulator protein for dgo operon (AAC76718.1); GntR family
YP_005254298.1	YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases su
YP_005254299.1	similar to Escherichia coli putative transport protein (AAC75831.1)
YP_005254300.1	similar to Escherichia coli starvation-sensing protein (AAC74653.1); muconate lactonizing enzyme family
YP_005254301.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC73855.1); LysR family
YP_005254302.1	negatively supercoils closed circular double-stranded DNA
YP_005254303.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_005254304.1	binds the polymerase to DNA and acts as a sliding clamp
YP_005254305.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_005254306.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_005254307.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_005254309.1	functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria
YP_005254310.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimeriza
YP_005254312.1	RNA-dependent DNA polymerase
YP_005254313.1	Confers resistance to chloramphenicol
YP_005254314.1	Involved in anaerobic NO protection
YP_005254317.1	similar to Escherichia coli putative membrane/transport protein (AAC76737.1); xanthine/uracil permeases family
YP_005254318.1	YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily
YP_005254319.1	regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon
YP_005254320.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_005254321.1	Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions
YP_005254322.1	part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions
YP_005254323.1	similar to Escherichia coli high-affinity phosphate-specific transport system; periplasmic phosphate-binding protein (AAC76751.1); ABC superfamily binding protein
YP_005254324.1	similar to Escherichia coli PTS system; fructose-specific transport protein (AAC75228.1)
YP_005254325.1	catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_005254326.1	similar to Escherichia coli putative transport protein (AAC73180.1)
YP_005254327.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_005254328.1	forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis
YP_005254330.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_005254331.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_005254332.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_005254333.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_005254334.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_005254335.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_005254336.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_005254337.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_005254338.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation
YP_005254339.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_005254340.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_005254341.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_005254342.1	transcriptional repressor of asnA which codes for aspartate-ammonia ligase
YP_005254343.1	catalyzes the formation of asparagine from aspartate and ammonia
YP_005254344.1	contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA
YP_005254345.1	interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase
YP_005254346.1	Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH
YP_005254347.1	cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source
YP_005254348.1	with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain
YP_005254349.1	functions to transport ribose at high affinity; forms a complex with RbsA2C2B
YP_005254350.1	periplasmic substrate-binding component of the ATP-dependent ribose transport system
YP_005254351.1	catalyzes the formation of D-ribose 5-phosphate from ribose
YP_005254352.1	DNA-binding transcriptional repressor of ribose metabolism
YP_005254353.1	similar to Escherichia coli putative transport protein (AAC76777.1); MFS family; 1st module
YP_005254354.1	GntR family
YP_005254355.1	Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon
YP_005254356.1	LysR type regulator; with pssR
YP_005254357.1	among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function
YP_005254358.1	ilvGmedA operon leader peptide; attenuator peptide (SW:LPID_ECOLI)
YP_005254359.1	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit
YP_005254360.1	similar to Escherichia coli acetolactate synthase II; valine insensitive (AAC77489.1)
YP_005254361.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_005254362.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_005254363.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_005254366.1	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate
YP_005254367.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_005254368.1	similar to Escherichia coli peptidyl-prolyl cis-trans isomerase C; rotamase C (AAC76780.1)
YP_005254369.1	similar to Escherichia coli required for NMN transport (AAC73838.1)
YP_005254370.1	single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication
YP_005254371.1	catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation
YP_005254372.1	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
YP_005254373.1	thioredoxin 1; TRX1; TRX (SW:THIO_ECOLI); redox factor
YP_005254374.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_005254375.1	similar to Escherichia coli UDP-GlcNAc-undecaprenylphosphate GlcNAc-1-phosphate transferase; synthesis of enterobacterial common antigen; ECA (AAC76789.1)
YP_005254376.1	Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein
YP_005254377.1	similar to Escherichia coli UDP-N-acetyl glucosamine-2-epimerase; synthesis of enterobacterial common antigen; ECA (AAC76791.1)
YP_005254378.1	catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid
YP_005254379.1	similar to Escherichia coli dTDP-glucose 4,6-dehydratase (AAC76793.1)
YP_005254380.1	similar to Escherichia coli glucose-1-phosphate thymidylyltransferase (AAC76794.1)
YP_005254382.1	catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis
YP_005254383.1	similar to Escherichia coli putative cytochrome (AAC76797.1); involved in LPS biosynthesis
YP_005254384.1	catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis
YP_005254385.1	enterobacterial common antigen polymerase
YP_005254386.1	probable UDP-N-acetyl-D-mannosaminuronic acid transferase (SW:WECG_SALTY)
YP_005254387.1	uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function
YP_005254388.1	similar to Escherichia coli protein involved in a late step of protoheme IX synthesis (AAC76805.1)
YP_005254389.1	similar to Escherichia coli uroporphyrinogen III methylase (AAC76806.1)
YP_005254390.1	catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis
YP_005254391.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_005254392.1	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
YP_005254396.1	defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly
YP_005254399.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_005254400.1	hypothetical protein in dapF-xerC intergenic region (SW:YIGA_SALTY)
YP_005254401.1	site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d
YP_005254402.1	YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function
YP_005254403.1	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch
YP_005254404.1	responsible for the influx of magnesium ions
YP_005254405.1	hypothetical 14.6 kDa protein in corA-rarD intergenic region (SW:YIGF_SALTY)
YP_005254408.1	hypothetical protein in rarD-pldA intergenic region (SW:YIGI_SALTY); possibly involved in aromatic compounds catabolism; PaaI
YP_005254409.1	catalyzes the hydrolysis of phosphatidylcholine
YP_005254410.1	functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway
YP_005254411.1	RhtB family
YP_005254413.1	lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates
YP_005254414.1	purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium
YP_005254416.1	transcriptional activator protein metR (SW:METR_SALTY); LysR family
YP_005254417.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_005254418.1	similar to Escherichia coli putative arylsulfatase regulator (AAC76803.1)
YP_005254419.1	similar to Escherichia coli putative enzyme (AAC76833.1)
YP_005254420.1	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway
YP_005254421.1	YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in
YP_005254422.1	Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone
YP_005254424.1	an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhi
YP_005254425.1	TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar
YP_005254426.1	mediates the export of protein precursors bearing twin-arginine signal peptides
YP_005254427.1	with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane
YP_005254428.1	magnesium dependent; not involved in the Sec-independent protein export system
YP_005254429.1	similar to Escherichia coli transcriptional activator that affects biosynthesis of lipopolysaccharide core, F pilin, and haemolysin (AAC76845.1); responsible for full expression of operons rfa, rfb, hly, tra, chu, cps, and kps; may suppress operon polarit
YP_005254430.1	catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol
YP_005254431.1	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin
YP_005254433.1	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_005254434.1	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacy
YP_005254435.1	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters
YP_005254437.1	similar to Escherichia coli potassium uptake, requires TrkE (AAC76852.1); Trk family
YP_005254438.1	catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX
YP_005254439.1	in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway
YP_005254440.1	in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis
YP_005254442.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_005254443.1	thiol-disulfide interchange protein DabA precursor (SW:DSBA_SALTY)
YP_005254444.1	similar to Escherichia coli putative endonuclease (AAC76860.1)
YP_005254445.1	has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair
YP_005254446.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_005254448.1	hypothetical 19.2 kDa protein in polA-hemN intergenic region (SW:YIHI_SALTY)
YP_005254449.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_005254450.1	response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54
YP_005254451.1	sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation
YP_005254452.1	forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltra
YP_005254454.1	similar to Escherichia coli putative GTP-binding factor (AAC76868.1)
YP_005254455.1	similar to Escherichia coli putative phosphatase (AAC73853.1)
YP_005254457.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_005254461.1	porin involved in the transport of small molecular weight solutes (up to 600 Daltons) across the cell wall; specific substrate still unknown
YP_005254462.1	similar to Escherichia coli putative permease (AAC76873.1)
YP_005254463.1	similar to Escherichia coli putative permease (AAC76874.1)
YP_005254464.1	similar to Escherichia coli putative glycosidase (AAC76875.1)
YP_005254465.1	similar to Escherichia coli putative aldose-1-epimerase (AAC76876.1)
YP_005254467.1	similar to Escherichia coli putative aldolase (AAD13443.1)
YP_005254468.1	similar to Escherichia coli putative dehydrogenase (AAD13444.1)
YP_005254469.1	similar to Escherichia coli putative kinase (AAD13445.1)
YP_005254470.1	similar to Escherichia coli putative DeoR-type transcriptional regulator (AAD13446.1); DeoR family
YP_005254471.1	similar to Escherichia coli putative phosphatase (AAD13447.1)
YP_005254472.1	RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease
YP_005254473.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_005254474.1	similar to Escherichia coli putative acetyltransferase (AAD13450.1)
YP_005254477.1	similar to Escherichia coli putative lipase (AAC73578.1)
YP_005254478.1	similar to hypothetical protein STM4032.2N (Pid: NP_945170.1).
YP_005254479.1	merR family
YP_005254480.1	required for the formation of active formate dehydrogenase
YP_005254481.1	cytochrome b556(FDO) component; heme containing
YP_005254482.1	similar to Escherichia coli formate dehydrogenase-O iron-sulfur subunit (AAD13455.1); Fe-S subunit
YP_005254483.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
YP_005254490.1	similar to Escherichia coli putative oxidoreductase (AAC76613.1); iron-containing
YP_005254491.1	similar to Escherichia coli rhamnulose-phosphate aldolase (AAC76884.1)
YP_005254492.1	catalyzes the formation of L-rhamnulose from L-rhamnose
YP_005254493.1	catalyzes the ATP-dependent phosphorylation of rhamnulose
YP_005254494.1	activates the expression of the rhaBAD operon and rhaT gene
YP_005254495.1	activates the expression of rhaRS in response to L-rhamnose
YP_005254496.1	transports L-rhamnose and L-lyxose into the cell
YP_005254497.1	hypothetical 15.6 kDa protein in RhaT 5'region (SW:YIIY_SALTY)
YP_005254498.1	similar to Escherichia coli putative membrane protein (AAC76602.1)
YP_005254500.1	hypothetical protein in sodA 5'region (SW:YIIZ_SALTY)
YP_005254501.1	SodA; manganese binding; only present under aerobic conditions; destroys free radicals
YP_005254504.1	part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors
YP_005254505.1	response regulator in two-component regulatory system with CpxA; part of the envelope stress response system
YP_005254506.1	repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates
YP_005254507.1	member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers
YP_005254508.1	catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis
YP_005254509.1	sulfate-binding protein (SW:SUBI_SALTY); ABC superfamily binding protein
YP_005254510.1	CDP-diacylglycerol pyrophosphatase (SW:CDH_SALTY)
YP_005254512.1	phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least
YP_005254514.1	similar to Escherichia coli transcriptional regulator of succinylCoA synthetase operon (AAC73824.1); GntR family
YP_005254516.1	similar to Escherichia coli CDP-diacylglycerol phosphotidylhydrolase (AAC76900.1)
YP_005254518.1	similar to Escherichia coli putative kinase (AAC74584.1)
YP_005254519.1	similar to Escherichia coli putative transcriptional regulator, sorC family (AAC74585.1)
YP_005254520.1	similar to Escherichia coli putative ATP-binding component of a transport system (AAC74586.1)
YP_005254521.1	similar to Escherichia coli putative transport system permease protein (AAC74587.1); putative ABC superfamily membrane protein
YP_005254522.1	similar to Escherichia coli putative transport system permease protein (AAC74588.1); putative ABC superfamily membrane protein
YP_005254523.1	similar to Escherichia coli putative LacI-type transcriptional regulator (AAC74589.1); putative ABC superfamily periplasmic protein
YP_005254526.1	catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate
YP_005254527.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_005254530.1	similar to Escherichia coli ferredoxin-NADP reductase (AAC76906.1)
YP_005254531.1	type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese
YP_005254532.1	Converts glycerol and ADP to glycerol-3-phosphate and ADP
YP_005254533.1	similar to Escherichia coli facilitated diffusion of glycerol (AAC76909.1); MIP channel
YP_005254535.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_005254536.1	catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate
YP_005254537.1	heat shock protein involved in degradation of misfolded proteins
YP_005254538.1	heat shock protein involved in degradation of misfolded proteins
YP_005254539.1	similar to Escherichia coli essential cell division protein (AAC76915.1)
YP_005254540.1	negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins
YP_005254541.1	binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity
YP_005254542.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing B
YP_005254545.1	when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis
YP_005254546.1	catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine
YP_005254547.1	multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_005254548.1	similar to Escherichia coli putative transport protein (AAC75961.1)
YP_005254549.1	similar to hypothetical protein SPC_4212 (Pid: YP_002639716.1).
YP_005254551.1	similar to Escherichia coli UDP-sugar hydrolase (AAC73582.1); similar to esterase
YP_005254552.1	MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor
YP_005254553.1	peroxidase/catalase HPI (SW:CATA_SALTY)
YP_005254555.1	forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone
YP_005254556.1	similar to transaldolase from Escherichia coli; many organisms have multiple copies
YP_005254557.1	similar to Escherichia coli PEP-protein phosphotransferase system enzyme I (AAC76929.1); general PTS family; enzyme I
YP_005254558.1	FrwC with FrwB, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; forms translocation channel and contains the specific substrate-binding site
YP_005254559.1	FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site o
YP_005254560.1	involved in production of D-lactate from glucose under microaerobic conditions; cytoplasmic protein
YP_005254561.1	similar to Escherichia coli probable pyruvate formate lyase activating enzyme 2 (AAC76934.1)
YP_005254562.1	FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog
YP_005254563.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC76936.1); AraC/XylS family
YP_005254565.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_005254566.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis
YP_005254567.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in
YP_005254568.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_005254569.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_005254570.1	Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA
YP_005254571.1	catalyzes the conversion of NADPH to NADH
YP_005254572.1	negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis
YP_005254574.1	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
YP_005254575.1	involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space
YP_005254576.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_005254577.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_005254578.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
YP_005254579.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_005254581.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promot
YP_005254582.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_005254583.1	Modulates Rho-dependent transcription termination
YP_005254584.1	binds directly to 23S ribosomal RNA
YP_005254585.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_005254586.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_005254587.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimula
YP_005254588.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_005254589.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_005254592.1	similar to hypothetical protein SARI_03506 (Pid: YP_001572473.1).
YP_005254595.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an ir
YP_005254596.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_005254597.1	with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate
YP_005254598.1	catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate
YP_005254599.1	catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate
YP_005254600.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_005254601.1	binds specifically to the major sigma factor sigma 70; active in stationary phase
YP_005254602.1	can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates
YP_005254603.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_005254604.1	Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and p
YP_005254606.1	histone-like DNA-binding protein
YP_005254609.1	sensor protein HydA (SW:HYDH_SALTY); in two component regulatory system with HydG
YP_005254610.1	DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein
YP_005254611.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_005254612.1	involved in de novo purine biosynthesis
YP_005254613.1	hypothetical protein in rrfE-metA intergenic region (SW:YJAB_SALTY)
YP_005254614.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_005254615.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_005254616.1	Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates
YP_005254617.1	catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive
YP_005254619.1	regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase
YP_005254620.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_005254621.1	hypothetical protein in metH-pepE intergenic region (SW:YJBB_SALTY); PNaS family
YP_005254622.1	alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family
YP_005254624.1	similar to Escherichia coli nucleoprotein/polynucleotide-associated enzyme (AAC73457.1)
YP_005254625.1	catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA
YP_005254632.1	similar to Escherichia coli putative membrane protein (AAC74454.1)
YP_005254637.1	similar to Escherichia coli putative glycan biosynthesis enzyme (AAC75410.1)
YP_005254644.1	similar to hypothetical protein SeHA_C4551 (Pid: YP_002048200.1).
YP_005254653.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive
YP_005254654.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_005254660.1	with MalKFE is involved in the transport of maltose into the cell
YP_005254661.1	with MalKGE is involved in maltose transport into the cell
YP_005254662.1	functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis
YP_005254663.1	with malEFG is involved in import of maltose/maltodextrin
YP_005254664.1	porin involved in the transport of maltose and maltodextrins
YP_005254665.1	maltose operon periplasmic protein precursor (SW:MALM_SALTY); protein of mal regulon
YP_005254666.1	catalyzes the formation of 4-hydroxybenzoate from chorismate
YP_005254667.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
YP_005254668.1	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA
YP_005254669.1	similar to Escherichia coli diacylglycerol kinase (AAC77012.1)
YP_005254670.1	Represses a number of genes involved in the response to DNA damage
YP_005254671.1	similar to Escherichia coli DNA-damage-inducible protein F (AAC77014.1); induced by UV and mitomycin C; SOS and lexA regulon
YP_005254673.1	unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential
YP_005254674.1	Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB
YP_005254675.1	similar to plasmid R64 TraF
YP_005254676.1	putative TIM-barrel enzyme; possibly dehydrogenases; nifR3 family
YP_005254677.1	coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia
YP_005254678.1	similar to Escherichia coli quinone oxidoreductase (AAC77021.1); NADPH-dependent
YP_005254679.1	unwinds double stranded DNA
YP_005254680.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
YP_005254681.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_005254682.1	Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity
YP_005254687.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion h
YP_005254689.1	binds to single stranded DNA and PriA helcase facilitate replication restart
YP_005254690.1	putative inner membrane or exported protein spi4_A (gi|7467268)
YP_005254691.1	hypothetical protein spi4_A (gi|7467268)
YP_005254692.1	similar to ABC exporter outer membrane component (gi|7467234)
YP_005254693.1	membrane permease; HlyD secretion protein (gi|7467244)
YP_005254694.1	fusion of two Salmonella typhimurium hypothetical proteins (gi|7467255) and (gi|7467255); may contain rearrangements with respect to similar proteins
YP_005254695.1	similar to leukotoxin expression protein B (gi|7467272); contains an N-terminal double-glycine peptidase domain
YP_005254698.1	regulates genes involved in response to oxidative stress
YP_005254699.1	redox-sensitive transcriptional activator SOXR (SW:SOXR_SALTY); MerR family; contains iron-sulfur center for redox-sensing
YP_005254701.1	xanthine/uracil permease family
YP_005254702.1	putative CPA1 family
YP_005254703.1	similar to Escherichia coli activator; hydrogen peroxide-inducible genes (AAC76943.1); LysR family
YP_005254705.1	similar to Escherichia coli putative seritonin transporter (AAC75203.1)
YP_005254706.1	member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake
YP_005254708.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_005254710.1	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552
YP_005254711.1	part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia
YP_005254712.1	similar to Escherichia coli formate-dependent nitrite reductase; FeS centers (AAC77042.1)
YP_005254713.1	similar to Escherichia coli formate-dependent nitrate reductase complex; transmembrane protein (AAC77043.1)
YP_005254714.1	similar to Escherichia coli formate-dependent nitrite reductase; possible assembly function (AAD13457.1); involved in attachment of haem c to cytochrome c552
YP_005254715.1	similar to Escherichia coli protein of formate-dependent nitrite reductase complex (AAD13459.1); involved in attachment of haem c to cytochrome c552
YP_005254716.1	carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system
YP_005254717.1	contains TPR repeats
YP_005254718.1	putative dioxygenase for lipid synthesis; LpxO (gi|9454389)
YP_005254719.1	PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids; part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source; Escherichia coli uses a different mechanism of phosphonate ca
YP_005254721.1	involved in phosphonate metabolism
YP_005254722.1	similar to Escherichia coli low-affinity transport system; proline permease II (AAC77072.1); MFS family
YP_005254723.1	sensor protein BasS/PmrB (SW:BASS_SALTY); in two-component regulatory system with BasR
YP_005254724.1	response regulator in two-component regulatory system with BasS
YP_005254725.1	with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division
YP_005254726.1	similar to Escherichia coli putative amino acid/amine transport protein; cryptic (AAC77076.1); APC family
YP_005254727.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC77077.1); AraC/XylS family; activates aidA
YP_005254728.1	similar to Escherichia coli biodegradative arginine decarboxylase (AAC77078.1); inducible by acid
YP_005254729.1	similar to Escherichia coli regulator of melibiose operon (AAC77079.1); AraC/XylS family
YP_005254730.1	alpha-galactosidase (SW:AGAL_SALTY)
YP_005254731.1	melibiose carrier protein; thiomethylgalactoside permease; melibiose permease; Na+/Li+ melibiose symporter; melibiosetransporter (SW:MELB_SALTY); GPH family
YP_005254732.1	similar to Escherichia coli fumarase B; fumarate hydratase class I anaerobic isozyme (AAC77083.1)
YP_005254733.1	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters
YP_005254735.1	response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration
YP_005254736.1	C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration
YP_005254737.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit A (AAC73980.1)
YP_005254738.1	similar to Escherichia coli anaerobic dimethyl sulfoxide reductase subunit B (AAC73981.1)
YP_005254739.1	similar to Escherichia coli putative DMSO reductase anchor subunit (AAC74662.1)
YP_005254740.1	similar to Escherichia coli putative oxidoreductase component (AAC74663.1)
YP_005254745.1	LuxR family
YP_005254746.1	HilD (gi|4455108); AraC-type; contains putative DNA-binding domain
YP_005254748.1	CopG family; putative helix-turn-helix protein
YP_005254750.1	nonspecific acid phosphatase precursor (SW:PHON_SALTY)
YP_005254751.1	similar to hypothetical protein SARI_03325 (Pid: YP_001572299.1).
YP_005254752.1	similar to Escherichia coli putative transcriptional regulator (AAC73589.1); MerR family
YP_005254754.1	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bon
YP_005254755.1	copper binding protein required for copper tolerance; involved in resistance toward heavy metals
YP_005254756.1	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB
YP_005254757.1	catalyzes the formation of fumarate from aspartate
YP_005254758.1	F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein
YP_005254759.1	uncharacterized member of the APC superfamily of amino acid transporters; unknown function
YP_005254760.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; re
YP_005254761.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they ar
YP_005254765.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_005254768.1	LuxR family
YP_005254769.1	member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations
YP_005254770.1	lipocalin; globomycin-sensitive outer membrane lipoprotein
YP_005254771.1	in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane
YP_005254772.1	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respecti
YP_005254773.1	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respecti
YP_005254774.1	part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respecti
YP_005254775.1	lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRN
YP_005254776.1	hypothetical protein in poxA-psd intergenic region (SW:YJEM_SALTY); APC family
YP_005254778.1	similar to Escherichia coli putative periplasmic binding protein (AAC77119.1)
YP_005254779.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_005254780.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_005254781.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_005254782.1	similar to Escherichia coli arginine 3rd transport system periplasmic binding protein (AAC73947.1)
YP_005254785.1	possibly involved in cell wall synthesis
YP_005254786.1	N-acetylmuramoyl-L-alanine amidase AMIB (SW:AMIB_SALTY); a murein hydrolase
YP_005254787.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itsel
YP_005254788.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA s
YP_005254789.1	Stimulates the elongation of poly(A) tails
YP_005254790.1	involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein
YP_005254791.1	with HflC inhibits proteolysis of lambda cII protein by FtsH
YP_005254792.1	with HflK inhibits proteolysis of lambda cII protein by FtsH
YP_005254794.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_005254795.1	negatively regulates the transcription of genes upregulated by nitrosative stress
YP_005254796.1	3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs
YP_005254797.1	Specifically methylates the ribose of guanosine 2251 in 23S rRNA
YP_005254799.1	similar to Escherichia coli putative alpha helical protein (AAC77139.1); IM30; suppresses sigma54-dependent transcription
YP_005254800.1	similar to eukaryotic potassium channels
YP_005254804.1	similar to Escherichia coli putative synthetase/amidase (AAC77143.1)
YP_005254805.1	catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA
YP_005254807.1	in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility
YP_005254808.1	YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo
YP_005254809.1	negative regulator of ulaG and ulaABCDEF
YP_005254810.1	contains beta-lactamase fold
YP_005254811.1	membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr
YP_005254812.1	involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake
YP_005254813.1	involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake
YP_005254814.1	catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization
YP_005254815.1	UlaE; catalyzes the epimerization of L-ribulose-5-phosphate into L-xylulose-5-phosphate; part of the anaerobic L-ascorbate degradation pathway
YP_005254816.1	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
YP_005254819.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_005254820.1	binds single-stranded DNA at the primosome assembly site
YP_005254821.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_005254822.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_005254825.1	FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
YP_005254826.1	involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine
YP_005254827.1	Involved in anaerobic NO protection and iron metabolism
YP_005254828.1	similar to Escherichia coli putative transmembrane subunit (AAC77167.1)
YP_005254829.1	similar to Escherichia coli putative oxidoreductase (AAC77168.1)
YP_005254831.1	periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate
YP_005254832.1	catalyzes the formation of AMP from adenosine-3',5'-bisphosphate
YP_005254835.1	similar to Escherichia coli putative transport protein (AAC77175.1)
YP_005254836.1	this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress
YP_005254840.1	similar to Escherichia coli D-galactonate transport (AAC76714.1)
YP_005254841.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_005254842.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_005254843.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_005254844.1	similar to Escherichia coli putative ligase (AAC77190.1)
YP_005254845.1	similar to hypothetical protein SeAg_B4697 (Pid: YP_002149332.1).
YP_005254847.1	similar to Escherichia coli xylose-proton symport (AAC77001.1)
YP_005254848.1	similar to hypothetical protein SPAB_05563 (Pid: YP_001591665.1).
YP_005254849.1	similar to Escherichia coli xylose-proton symport (AAC77001.1)
YP_005254851.1	similar to Escherichia coli phenylacetaldehyde dehydrogenase (AAC74467.1)
YP_005254852.1	similar to Escherichia coli putative AraC-type regulatory protein (AAC74766.1); contains putative DNA-binding domain
YP_005254854.1	similar to Escherichia coli putative dehydrogenase (AAC77236.1)
YP_005254855.1	SrfJ (gi|8347262); activated by transcription factor SsrB; similar to Homo sapiens lysosomal glucosyl ceramidase
YP_005254857.1	similar to Escherichia coli putative transport protein (AAC75382.1)
YP_005254858.1	ribokinase family
YP_005254859.1	similar to E. coli acetolactate synthase I,valine-sensitive, large subunit (AAC76694.1); Blastp hitto AAC76694.1 (562 aa)
YP_005254860.1	similar to Escherichia coli putative virulence factor (AAC74152.1); oxidoreductase family; putative thiamine pyrophosphate-requiring enzyme
YP_005254861.1	similar to Escherichia coli putative transport protein (AAC77235.1)
YP_005254864.1	similar to Escherichia coli putative alpha helix protein (AAC77191.1)
YP_005254865.1	protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD
YP_005254866.1	similar to Escherichia coli cytochrome b562 (AAC77193.1)
YP_005254867.1	nitrogen regulation protein NR(ii) (SW:NTRB_SALTY)
YP_005254872.1	Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides
YP_005254873.1	L-seryl-tRNA selenium transferase
YP_005254875.1	Ntr-type
YP_005254876.1	Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor
YP_005254878.1	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions
YP_005254879.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_005254880.1	similar to Escherichia coli trehalase 6-P hydrolase (AAC77196.1); alternative inducer of maltose system; cytoplasmic
YP_005254881.1	regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon
YP_005254882.1	P-type ATPase involved in magnesium influx
YP_005254885.1	involved in the allosteric regulation of aspartate carbamoyltransferase
YP_005254886.1	catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis
YP_005254887.1	pyrBI operon leader peptide (attenuator) (SW:LPPY_SALTY); contains a frameshift and premature stop as compared to Escherichia coli pyrBI operon leader peptide
YP_005254888.1	similar to E. coli orf, hypothetical protein(AAC77204.1); Blastp hit to AAC77204.1 (110 aa)
YP_005254889.1	similar to Escherichia coli repressor of arg regulon; cer-mediated site specific recombination (AAC76269.1)
YP_005254890.1	similar to Escherichia coli putative S-transferase (AAC75358.1)
YP_005254891.1	catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway
YP_005254892.1	reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP
YP_005254893.1	catalyzes the degradation of arginine to citruline and ammonia
YP_005254895.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in th
YP_005254896.1	hypothetical 15.7 dda protein in argI-miaE intergenic region (ORF15.6) (SW:YJGD_SALTY)
YP_005254897.1	tRNA-hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA (SW:MIAE_SALTY)
YP_005254898.1	hypothetical 17.8 kKa protein in miaE 3'region (ORF 17.8) (SW:YTGA_SALTY)
YP_005254899.1	hypothetical 18.3 kDa protein in miaE 3'region (ORF 18.3) (SW:YJGM_SALTY)
YP_005254900.1	hypothetical protein in miaE 3'region (ORF x) (SW:YJGN_SALTY)
YP_005254901.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_005254902.1	binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_005254903.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_005254907.1	similar to Escherichia coli L-idonate transcriptional regulator (AAC77221.1); GalR/LacI family
YP_005254908.1	similar to Escherichia coli L-idonate transporter (AAC77222.1); GntP family
YP_005254909.1	Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate
YP_005254910.1	NAD-binding
YP_005254911.1	similar to Escherichia coli gluconate kinase, thermosensitive glucokinase (AAC77225.1)
YP_005254912.1	similar to Escherichia coli putative oxidoreductase (AAC77226.1)
YP_005254913.1	similar to Escherichia coli putative prophage integrase (AAC75495.1)
YP_005254914.1	similar to Escherichia coli putative frameshift suppressor (AAC77264.1); superfamily I
YP_005254915.1	Mrr
YP_005254916.1	similar to Escherichia coli DNA-binding, ATP-dependent protease La; heat shock K-protein (AAC73542.1)
YP_005254924.1	similar to molybdopterin-guanine dinucleotide biosynthesis protein A (Pid: YP_001749801.1).
YP_005254926.1	similar to Escherichia coli putative methyltransferase (AAC77262.1)
YP_005254930.1	IicA (gi|5616506)
YP_005254931.1	putative inner membrane or exported
YP_005254933.1	regulates the expression of uxuBA
YP_005254934.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_005254936.1	similar to Escherichia coli putative resistance proteins (AAC75879.1)
YP_005254937.1	similar to Escherichia coli putative transcriptional regulator LysR-type (AAC77283.1); LysR family
YP_005254938.1	similar to Escherichia coli isoaspartyl dipeptidase (AAC77284.1)
YP_005254941.1	similar to Escherichia coli putative transport protein (AAC77288.1)
YP_005254943.1	similar to Escherichia coli putative transport protein (AAC77293.1); MFS family
YP_005254945.1	similar to Escherichia coli putative aldehyde dehydrogenase (AAC74598.1)
YP_005254949.1	involved in the degradation of RNA; may be involved in the recycling of RNA during the SOS response
YP_005254950.1	S protein; STYSJI specificity protein (SW:T1S_SALTY); specificity determinant for hsdM and hsdR
YP_005254951.1	type I restriction enzyme STYSJI Mm protein (SW:T1M_SALTY); host modification
YP_005254952.1	restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities
YP_005254953.1	similar to Escherichia coli restriction of methylated adenine (AAC77307.1); restriction of methylated adenine
YP_005254958.1	similar to Escherichia coli putative carbon starvation protein (AAC77310.1)
YP_005254959.1	similar to Escherichia coli methyl-accepting chemotaxis protein I; serine sensor receptor (AAC77311.1)
YP_005254960.1	similar to Escherichia coli psp operon transcriptional activator (AAC74385.1); NtrC family; contains ATPase domain
YP_005254961.1	similar to Escherichia coli PTS enzyme IIAB, mannose-specific (AAC74887.1)
YP_005254962.1	similar to Escherichia coli PTS enzyme IIAB, mannose-specific (AAC74887.1)
YP_005254963.1	similar to Escherichia coli PTS system N-acetylgalactosamine-specific IIC component 1 (AAC76173.1)
YP_005254964.1	similar to Escherichia coli PTS enzyme IID; mannose-specific (AAC74889.1)
YP_005254965.1	similar to Escherichia coli L-glutamine:D-fructose-6-phosphate aminotransferase (AAC76752.1)
YP_005254966.1	similar to Escherichia coli putative transport protein (AAC76396.1)
YP_005254967.1	catalyzes the transfer of phosphoglycerol to the glucan backbone
YP_005254968.1	similar to Escherichia coli putative glycoprotein/receptor (AAC77316.1)
YP_005254969.1	acts to load the DnaB helicase onto the initiation site during DNA replication
YP_005254970.1	This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein
YP_005254972.1	similar to Escherichia coli putative structural protein (AAC77320.1)
YP_005254973.1	similar to Escherichia coli putative regulator (AAC77321.1); LuxR/UhpA family
YP_005254974.1	regulator for the transport and utilization of the aromatic beta-glucosides arbutin and silicin
YP_005254976.1	involved in reduction of ferric iron in cytoplasmic ferrioxamine B
YP_005254977.1	contains putative diguanylate cyclase/phosphodiesterase domain 1
YP_005254979.1	16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit
YP_005254980.1	with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB
YP_005254981.1	alanine acetyltransferase that specifically acetylates ribosomal protein S18
YP_005254982.1	manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily
YP_005254983.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_005254984.1	similar to Escherichia coli hyperosmotically inducible periplasmic protein (AAC77329.1); RpoS-dependent stationary phase gene
YP_005254988.1	similar to Escherichia coli putative activating enzyme (AAC77332.1)
YP_005254990.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_005254991.1	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
YP_005254992.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_005254993.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
YP_005254995.1	similar to Escherichia coli putative outer membrane protein (AAC76248.1)
YP_005254996.1	member of the periplasmic pilus chaperone family of proteins
YP_005254997.1	similar to Escherichia coli putative transcriptional regulator (AAC76251.1)
YP_005254998.1	similar to Escherichia coli putative transcriptional regulator (AAC76251.1)
YP_005254999.1	Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-
YP_005255000.1	membrane protein; transcribed divergently from serB
YP_005255001.1	catalyzes the formation of serine from O-phosphoserine
YP_005255002.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_005255003.1	catalyzes the formation of NAD(+) from nicotinamide ribonucleotide
YP_005255004.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_005255005.1	catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan
YP_005255006.1	When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription
YP_005255007.1	pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of
YP_005255008.1	catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate
YP_005255009.1	similar to Escherichia coli right origin-binding protein (AAC77349.1); AraC/XylS family
YP_005255011.1	response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation
YP_005255012.1	part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation
YP_005255013.1	similar to Escherichia coli tolerance to colicin E2 (AAC77353.1)
YP_005255015.1	similar to Escherichia coli fimbrial morphology (AAC77275.1)
YP_005255016.1	similar to Escherichia coli putative outer membrane protein; export function (AAC73634.1)
YP_005255017.1	similar to Escherichia coli periplasmic chaperone; required for type 1 fimbriae (AAC77272.1)
YP_005255018.1	similar to Escherichia coli fimbrial morphology (AAC77274.1)
YP_005255021.1	similar to Escherichia coli negative response regulator of genes in aerobic pathways with sensors ArcB and CpxA (AAC77354.1); OmpR family; regulates genes in aerobic pathways
YP_005255023.1	member of the SPOUT superfamily of methyltransferases
YP_005255050.1	binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization
YP_005255053.1	binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization
YP_005255054.1	related to umuDC operon
YP_005255099.1	similar to mvpA, Shigella flexneri
YP_005255110.1	sdiA-regulated protein
YP_005255112.1	sdiA-regulated protein
YP_005255113.1	sdiA-regulated protein