-- dump date 20240506_002305 -- class Genbank::Contig -- table contig_comment -- id comment NC_014168.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001958.1.REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at theREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIPREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMPREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputumREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USAREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiensREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: AirwaysREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: MesophileREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28CREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48 Pseudo Genes (frameshifted) :: 10 of 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48 Pseudo Genes (frameshifted) :: 10 of 48 Pseudo Genes (incomplete) :: 43 of 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48 Pseudo Genes (frameshifted) :: 10 of 48 Pseudo Genes (incomplete) :: 43 of 48 Pseudo Genes (internal stop) :: 3 of 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48 Pseudo Genes (frameshifted) :: 10 of 48 Pseudo Genes (incomplete) :: 43 of 48 Pseudo Genes (internal stop) :: 3 of 48 Pseudo Genes (multiple problems) :: 7 of 48REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48 Pseudo Genes (frameshifted) :: 10 of 48 Pseudo Genes (incomplete) :: 43 of 48 Pseudo Genes (internal stop) :: 3 of 48 Pseudo Genes (multiple problems) :: 7 of 48 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001958.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4083320 Source DNA and organism available from Hans-Peter Klenk at the German Collection of Microorganisms and Cell Cultures (DSMZ) (hans-peter.klenk@dsmz.de) Contacts: Jonathan A. Eisen (jaeisen@ucdavis.edu) David Bruce (microbe@cuba.jgi-psf.org) Whole genome sequencing and draft assembly at JGI-PGF Finishing done by JGI-LANL Annotation by JGI-ORNL and JGI-PGF The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Metadata-START## Organism Display Name :: Segniliparus rotundus DSM 44985 Culture Collection ID :: DSM 44985, ATCC BAA-972, CDC 1076, CIP 108378, JCM 13578 GOLD Stamp ID :: Gi02321 Greengenes ID :: 105706 Funding Program :: DOE-GEBA 2007 Gene Calling Method :: Prodigal, GenePRIMP Isolation Site :: Human sputum Isolation Country :: USA Host Name :: Homo sapiens Body Sample Site :: Airways Cell Shape :: Rod-shaped Temperature Range :: Mesophile Temperature Optimum :: 28C Gram Staining :: gram+ Biotic Relationship :: Free living Diseases :: None ##Metadata-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/02/2023 01:26:02 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,109 CDSs (total) :: 3,057 Genes (coding) :: 3,009 CDSs (with protein) :: 3,009 Genes (RNA) :: 52 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 3 Pseudo Genes (total) :: 48 CDSs (without protein) :: 48 Pseudo Genes (ambiguous residues) :: 0 of 48 Pseudo Genes (frameshifted) :: 10 of 48 Pseudo Genes (incomplete) :: 43 of 48 Pseudo Genes (internal stop) :: 3 of 48 Pseudo Genes (multiple problems) :: 7 of 48 ##Genome-Annotation-Data-END## COMPLETENESS: full length.