-- dump date   	20140620_064009
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
60480000001	SEQ_END	SEQ_END	NC_008321.1	4706287	4706287	DR	NC_008321.1; contig end	4706287..4706287	Shewanella sp. MR-4	<NULL_VALUE>
YP_732140.1	CDS	dnaA	NC_008321.1	79	1461	D	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein	79..1461	Shewanella sp. MR-4	4250600
YP_732141.1	CDS	Shewmr4_0002	NC_008321.1	1482	2582	D	KEGG: son:SO0009 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta	1482..2582	Shewanella sp. MR-4	4250601
YP_732142.1	CDS	recF	NC_008321.1	2744	3826	D	Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F	2744..3826	Shewanella sp. MR-4	4250602
YP_732143.1	CDS	Shewmr4_0004	NC_008321.1	3843	6260	D	KEGG: son:SO0011 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B	3843..6260	Shewanella sp. MR-4	4250603
YP_732144.1	CDS	Shewmr4_0005	NC_008321.1	6341	6997	R	PFAM: Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO0012 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein	complement(6341..6997)	Shewanella sp. MR-4	4250604
YP_732145.1	CDS	Shewmr4_0006	NC_008321.1	7124	7972	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vvu:VV20874 transcriptional regulator; LysR family transcriptional regulator	7124..7972	Shewanella sp. MR-4	4250605
YP_732146.1	CDS	Shewmr4_0007	NC_008321.1	8128	9171	D	KEGG: son:SO0013 hypothetical protein; putative signal transduction protein	8128..9171	Shewanella sp. MR-4	4250606
YP_732147.1	CDS	glyS	NC_008321.1	9235	11301	R	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta	complement(9235..11301)	Shewanella sp. MR-4	4250607
YP_732148.1	CDS	glyQ	NC_008321.1	11311	12216	R	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha	complement(11311..12216)	Shewanella sp. MR-4	4250608
YP_732149.1	CDS	Shewmr4_0010	NC_008321.1	12335	12907	D	KEGG: son:SO0016 DNA-3-methyladenine glycosidase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I	12335..12907	Shewanella sp. MR-4	4250609
YP_732150.1	CDS	Shewmr4_0011	NC_008321.1	12996	16184	R	PFAM: amidohydrolase; WD40 domain protein beta Propeller; KEGG: son:SO0017 hypothetical amidohydrolase; amidohydrolase	complement(12996..16184)	Shewanella sp. MR-4	4250610
YP_732151.1	CDS	Shewmr4_0012	NC_008321.1	16381	16818	R	KEGG: son:SO0018 hypothetical protein; hypothetical protein	complement(16381..16818)	Shewanella sp. MR-4	4250611
YP_732152.1	CDS	Shewmr4_0013	NC_008321.1	16854	17099	R	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA	complement(16854..17099)	Shewanella sp. MR-4	4250612
YP_732153.1	CDS	Shewmr4_0014	NC_008321.1	17258	18451	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cvi:CV0239 hypothetical protein; diguanylate cyclase	complement(17258..18451)	Shewanella sp. MR-4	4250613
YP_732154.1	CDS	Shewmr4_0015	NC_008321.1	18661	19464	R	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	complement(18661..19464)	Shewanella sp. MR-4	4250614
YP_732155.1	CDS	Shewmr4_0016	NC_008321.1	19494	19889	R	KEGG: dde:Dde_2987 transposase; transposase	complement(19494..19889)	Shewanella sp. MR-4	4250615
YP_732156.1	CDS	fadA	NC_008321.1	19987	21150	R	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase	complement(19987..21150)	Shewanella sp. MR-4	4250616
YP_732157.1	CDS	fadB	NC_008321.1	21173	23323	R	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha	complement(21173..23323)	Shewanella sp. MR-4	4250617
YP_732158.1	CDS	Shewmr4_0019	NC_008321.1	23767	25086	D	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase	23767..25086	Shewanella sp. MR-4	4250705
YP_732159.1	CDS	Shewmr4_0020	NC_008321.1	25102	25716	D	PFAM: protein of unknown function UPF0029; KEGG: son:SO0023 conserved hypothetical protein TIGR00257; hypothetical protein	25102..25716	Shewanella sp. MR-4	4250706
YP_732160.1	CDS	Shewmr4_0021	NC_008321.1	25794	27251	D	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: son:SO0024 potassium uptake protein TrkH; TrkH family potassium uptake protein	25794..27251	Shewanella sp. MR-4	4250707
YP_732161.1	CDS	Shewmr4_0022	NC_008321.1	27253	27777	D	KEGG: son:SO0025 protoporphyrinogen oxidase; protoporphyrinogen oxidase	27253..27777	Shewanella sp. MR-4	4250708
YP_732162.1	CDS	Shewmr4_0023	NC_008321.1	27840	28148	R	PFAM: regulatory protein, ArsR; KEGG: son:SO0026 transcriptional regulator, ArsR family; ArsR family transcriptional regulator	complement(27840..28148)	Shewanella sp. MR-4	4250709
YP_732163.1	CDS	Shewmr4_0024	NC_008321.1	28348	28902	D	KEGG: son:SO0027 protoporphyrinogen oxidase; protoporphyrinogen oxidase	28348..28902	Shewanella sp. MR-4	4250710
YP_732164.1	CDS	Shewmr4_0025	NC_008321.1	28949	30391	R	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: son:SO0028 potassium uptake protein TrkH; TrkH family potassium uptake protein	complement(28949..30391)	Shewanella sp. MR-4	4250711
YP_732165.1	CDS	trkA	NC_008321.1	30403	31812	R	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component	complement(30403..31812)	Shewanella sp. MR-4	4250712
YP_732166.1	CDS	Shewmr4_0027	NC_008321.1	31828	33117	R	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; Methyltransferase type 11; KEGG: son:SO0030 Sun protein; sun protein	complement(31828..33117)	Shewanella sp. MR-4	4250713
YP_732167.1	CDS	Shewmr4_0028	NC_008321.1	33117	34073	R	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: son:SO0031 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase	complement(33117..34073)	Shewanella sp. MR-4	4250714
YP_732168.1	CDS	def	NC_008321.1	34089	34595	R	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase	complement(34089..34595)	Shewanella sp. MR-4	4250715
YP_732169.1	CDS	Shewmr4_0030	NC_008321.1	34721	35845	D	PFAM: Peptidoglycan-binding LysM; KEGG: son:SO0033 LysM domain protein; peptidoglycan-binding LysM	34721..35845	Shewanella sp. MR-4	4250716
YP_732170.1	CDS	Shewmr4_0031	NC_008321.1	35929	36945	D	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: son:SO0034 DNA processing protein DprA, putative; DNA protecting protein DprA	35929..36945	Shewanella sp. MR-4	4250717
YP_732171.1	CDS	Shewmr4_0032	NC_008321.1	36948	37424	D	PFAM: protein of unknown function DUF494; KEGG: son:SO0035 Smg protein; hypothetical protein	36948..37424	Shewanella sp. MR-4	4250718
YP_732172.1	CDS	Shewmr4_0033	NC_008321.1	37547	38110	D	PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: son:SO0036 topoisomerase DNA-binding C4 zinc finger domain protein; DNA topoisomerase type IA Zn finger domain-containing protein	37547..38110	Shewanella sp. MR-4	4250719
YP_732173.1	CDS	Shewmr4_0034	NC_008321.1	38249	38815	D	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain protein; KEGG: son:SO0037 Sua5/YciO/YrdC/YwlC family protein; translation factor SUA5	38249..38815	Shewanella sp. MR-4	4250720
YP_732174.1	CDS	Shewmr4_0035	NC_008321.1	38845	39753	D	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase	38845..39753	Shewanella sp. MR-4	4250721
YP_732175.1	CDS	Shewmr4_0036	NC_008321.1	39785	40222	R	PFAM: globin; KEGG: son:SO0039 hypothetical globin; globin	complement(39785..40222)	Shewanella sp. MR-4	4250652
YP_732176.1	CDS	aroE	NC_008321.1	40394	41272	D	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase	40394..41272	Shewanella sp. MR-4	4250653
YP_732177.1	CDS	Shewmr4_0038	NC_008321.1	41293	41568	D	PFAM: protein of unknown function DUF1488; KEGG: son:SO0041 hypothetical protein; hypothetical protein	41293..41568	Shewanella sp. MR-4	4250654
YP_732178.1	CDS	Shewmr4_0039	NC_008321.1	41625	42173	R	KEGG: son:SO0042 carbonic anhydrase, family 3; carbonic anhydrase	complement(41625..42173)	Shewanella sp. MR-4	4250655
YP_732179.1	CDS	Shewmr4_0040	NC_008321.1	48200	48454	D	PFAM: protein of unknown function UPF0153; KEGG: son:SO0044 hypothetical protein; hypothetical protein	48200..48454	Shewanella sp. MR-4	4250656
YP_732180.1	CDS	Shewmr4_0041	NC_008321.1	48476	48931	D	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: son:SO0045 Rrf2 family protein; BadM/Rrf2 family transcriptional regulator	48476..48931	Shewanella sp. MR-4	4250657
YP_732181.1	CDS	Shewmr4_0042	NC_008321.1	48906	49661	R	PFAM: protein of unknown function DUF610, YibQ; KEGG: son:SO0046 hypothetical protein; hypothetical protein	complement(48906..49661)	Shewanella sp. MR-4	4250658
YP_732182.1	CDS	Shewmr4_0043	NC_008321.1	49674	50879	R	KEGG: son:SO0047 carboxyl-terminal protease, putative; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; C-terminal processing peptidase-3	complement(49674..50879)	Shewanella sp. MR-4	4250659
YP_732183.1	CDS	Shewmr4_0045	NC_008321.1	52071	53615	R	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase	complement(52071..53615)	Shewanella sp. MR-4	4250660
YP_732184.1	CDS	Shewmr4_0046	NC_008321.1	53881	54315	D	PFAM: Rhodanese domain protein; KEGG: son:SO0050 rhodanese domain protein; rhodanese domain-containing protein	53881..54315	Shewanella sp. MR-4	4250661
YP_732185.1	CDS	Shewmr4_0047	NC_008321.1	54576	55061	D	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB	54576..55061	Shewanella sp. MR-4	4250662
YP_732186.1	CDS	gpsA	NC_008321.1	55066	56082	D	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	55066..56082	Shewanella sp. MR-4	4250663
YP_732187.1	CDS	Shewmr4_0049	NC_008321.1	56321	57505	D	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0054 conserved hypothetical protein TIGR00275; hypothetical protein	56321..57505	Shewanella sp. MR-4	4250664
YP_732188.1	CDS	Shewmr4_0050	NC_008321.1	58053	59630	D	hypothetical protein	58053..59630	Shewanella sp. MR-4	4250665
YP_732189.1	CDS	Shewmr4_0051	NC_008321.1	59838	61199	R	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: son:SO0057 potassium uptake protein, Trk family; TrkH family potassium uptake protein	complement(59838..61199)	Shewanella sp. MR-4	4250666
YP_732190.1	CDS	Shewmr4_0052	NC_008321.1	61201	61899	R	PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: son:SO0058 potassium uptake protein, putative; TrkA domain-containing protein	complement(61201..61899)	Shewanella sp. MR-4	4250667
YP_732191.1	CDS	Shewmr4_0053	NC_008321.1	61944	62633	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO0059 transcriptional regulatory protein KdpE; two component transcriptional regulator	complement(61944..62633)	Shewanella sp. MR-4	4250668
YP_732192.1	CDS	Shewmr4_0054	NC_008321.1	62634	63680	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO0060 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(62634..63680)	Shewanella sp. MR-4	4250669
YP_732193.1	CDS	Shewmr4_0055	NC_008321.1	63908	64831	R	PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: csa:Csal_1778 pirin-like protein; pirin domain-containing protein	complement(63908..64831)	Shewanella sp. MR-4	4250934
YP_732194.1	CDS	Shewmr4_0056	NC_008321.1	65316	66989	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: cvi:CV1771 probable sensor kinase protein; signal transduction histidine kinase, LytS	65316..66989	Shewanella sp. MR-4	4250935
YP_732195.1	CDS	Shewmr4_0057	NC_008321.1	66983	67714	D	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cvi:CV1770 probable two-component transcriptional regulator; response regulator receiver protein	66983..67714	Shewanella sp. MR-4	4250936
YP_732196.1	CDS	Shewmr4_0058	NC_008321.1	67822	69066	D	PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV1769 probable resistance protein; major facilitator transporter	67822..69066	Shewanella sp. MR-4	4250937
YP_732197.1	CDS	Shewmr4_0059	NC_008321.1	69156	69776	R	KEGG: ppr:PBPRA1645 hypothetical protein; hypothetical protein	complement(69156..69776)	Shewanella sp. MR-4	4250938
YP_732198.1	CDS	Shewmr4_0060	NC_008321.1	70202	70939	D	PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_1586 protein of unknown function DUF81; hypothetical protein	70202..70939	Shewanella sp. MR-4	4250939
YP_732199.1	CDS	Shewmr4_0061	NC_008321.1	71040	71519	D	PFAM: NLP/P60 protein; KEGG: son:SO0061 lipoprotein, NLP/P60 family; NLP/P60 protein	71040..71519	Shewanella sp. MR-4	4250940
YP_732200.1	CDS	Shewmr4_0062	NC_008321.1	71544	72992	D	PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1597 multidrug transporter, putative; major facilitator transporter	71544..72992	Shewanella sp. MR-4	4250941
YP_732201.1	CDS	Shewmr4_0063	NC_008321.1	73081	74109	D	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: hch:HCH_04796 transcriptional regulator; LacI family transcription regulator	73081..74109	Shewanella sp. MR-4	4250942
YP_732202.1	CDS	Shewmr4_0064	NC_008321.1	74168	75652	R	KEGG: atc:AGR_pTi_251 sucrose phosphorylase SplA; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; sucrose phosphorylase	complement(74168..75652)	Shewanella sp. MR-4	4250943
YP_732203.1	CDS	Shewmr4_0065	NC_008321.1	75909	77129	D	PFAM: major facilitator superfamily MFS_1; KEGG: ccr:CC1133 transporter, putative; major facilitator transporter	75909..77129	Shewanella sp. MR-4	4250944
YP_732204.1	CDS	Shewmr4_0066	NC_008321.1	77389	79785	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ccr:CC1136 TonB-dependent receptor; TonB-dependent receptor	77389..79785	Shewanella sp. MR-4	4250945
YP_732205.1	CDS	Shewmr4_0067	NC_008321.1	79878	80837	D	PFAM: PfkB domain protein; KEGG: csa:Csal_0931 PfkB; ribokinase-like domain-containing protein	79878..80837	Shewanella sp. MR-4	4250946
YP_732206.1	CDS	mogA	NC_008321.1	81043	81576	D	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA	81043..81576	Shewanella sp. MR-4	4250947
YP_732207.1	CDS	Shewmr4_0069	NC_008321.1	81610	81828	R	hypothetical protein	complement(81610..81828)	Shewanella sp. MR-4	4250948
YP_732208.1	CDS	Shewmr4_0070	NC_008321.1	81980	83023	D	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B1553 transcriptional regulator, AraC family; transcriptional regulator	81980..83023	Shewanella sp. MR-4	4250949
YP_732209.1	CDS	Shewmr4_0071	NC_008321.1	83027	83287	R	KEGG: son:SO0068 hypothetical protein; hypothetical protein	complement(83027..83287)	Shewanella sp. MR-4	4250950
YP_732210.1	CDS	Shewmr4_0072	NC_008321.1	83337	84476	R	KEGG: son:SO0069 transport protein, putative; transport protein	complement(83337..84476)	Shewanella sp. MR-4	4250951
YP_732211.1	CDS	Shewmr4_0073	NC_008321.1	84565	85299	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0070 ATP-binding transport protein NatA; ABC transporter-like protein	complement(84565..85299)	Shewanella sp. MR-4	4250952
YP_732212.1	CDS	Shewmr4_0074	NC_008321.1	85302	86909	R	PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: son:SO0071 hydrolase, alpha/beta hydrolase fold family; TAP domain-containing protein	complement(85302..86909)	Shewanella sp. MR-4	4250953
YP_732213.1	CDS	Shewmr4_0075	NC_008321.1	87002	87367	D	PFAM: regulatory protein GntR, HTH; KEGG: son:SO0072 transcriptional regulator, GntR family; GntR family transcriptional regulator	87002..87367	Shewanella sp. MR-4	4250954
YP_732214.1	CDS	Shewmr4_0076	NC_008321.1	87414	88277	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0073 ABC transporter, ATP-binding protein; ABC transporter-like protein	87414..88277	Shewanella sp. MR-4	4250955
YP_732215.1	CDS	Shewmr4_0077	NC_008321.1	88274	89584	D	KEGG: son:SO0074 hypothetical protein; hypothetical protein	88274..89584	Shewanella sp. MR-4	4250956
YP_732216.1	CDS	Shewmr4_0078	NC_008321.1	89713	91506	D	PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO0075 AMP-binding family protein; AMP-dependent synthetase and ligase	89713..91506	Shewanella sp. MR-4	4250957
YP_732217.1	CDS	Shewmr4_0079	NC_008321.1	91647	94136	D	PFAM: MORN variant repeat protein; KEGG: son:SO0076 hypothetical protein; MORN repeat-containing protein	91647..94136	Shewanella sp. MR-4	4250958
YP_732218.1	CDS	Shewmr4_0080	NC_008321.1	94244	94654	D	PFAM: thioesterase superfamily protein; KEGG: son:SO0077 hypothetical 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein	94244..94654	Shewanella sp. MR-4	4250959
YP_732219.1	CDS	Shewmr4_0081	NC_008321.1	94772	95320	D	PFAM: HPP family protein; KEGG: tdn:Tmden_1127 HPP; HPP family protein	94772..95320	Shewanella sp. MR-4	4250960
YP_732220.1	CDS	Shewmr4_0082	NC_008321.1	95572	95979	R	KEGG: son:SO0078 hypothetical protein; hypothetical protein	complement(95572..95979)	Shewanella sp. MR-4	4250961
YP_732221.1	CDS	Shewmr4_0083	NC_008321.1	96029	96292	R	KEGG: son:SO0079 hypothetical protein; hypothetical protein	complement(96029..96292)	Shewanella sp. MR-4	4250962
YP_732222.1	CDS	Shewmr4_0084	NC_008321.1	96352	96816	R	PFAM: thioesterase superfamily protein; KEGG: son:SO0080 hypothetical 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein	complement(96352..96816)	Shewanella sp. MR-4	4250963
YP_732223.1	CDS	Shewmr4_0085	NC_008321.1	96964	97317	D	PFAM: regulatory protein, MerR; KEGG: sdn:Sden_1798 regulatory protein, MerR; MerR family transcriptional regulator	96964..97317	Shewanella sp. MR-4	4250964
YP_732224.1	CDS	Shewmr4_0086	NC_008321.1	97389	97967	D	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sdn:Sden_1799 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone)	97389..97967	Shewanella sp. MR-4	4250965
YP_732225.1	CDS	Shewmr4_0087	NC_008321.1	97983	98378	D	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: vpa:VP1790 hypothetical protein; glutathione-dependent formaldehyde-activating, GFA	97983..98378	Shewanella sp. MR-4	4250966
YP_732226.1	CDS	Shewmr4_0088	NC_008321.1	98382	98738	D	PFAM: regulatory protein, MerR; KEGG: son:SO0082 transcriptional regulator, MerR family; MerR family transcriptional regulator	98382..98738	Shewanella sp. MR-4	4250967
YP_732227.1	CDS	Shewmr4_0089	NC_008321.1	98922	99308	D	PFAM: Carboxymuconolactone decarboxylase; KEGG: son:SO0083 carboxymuconolactone decarboxylase family protein; carboxymuconolactone decarboxylase	98922..99308	Shewanella sp. MR-4	4250968
YP_732228.1	CDS	Shewmr4_0090	NC_008321.1	99360	100040	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO0084 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase	complement(99360..100040)	Shewanella sp. MR-4	4250969
YP_732229.1	CDS	Shewmr4_0091	NC_008321.1	100404	100838	D	KEGG: son:SO0085 hypothetical protein; hypothetical protein	100404..100838	Shewanella sp. MR-4	4250970
YP_732230.1	CDS	Shewmr4_0092	NC_008321.1	100931	101944	D	KEGG: son:SO4661 hypothetical protein; hypothetical protein	100931..101944	Shewanella sp. MR-4	4250971
YP_732231.1	CDS	Shewmr4_0093	NC_008321.1	102073	102804	D	KEGG: son:SO0087 hypothetical protein; hypothetical protein	102073..102804	Shewanella sp. MR-4	4250972
YP_732232.1	CDS	Shewmr4_0094	NC_008321.1	102895	104802	R	PFAM: protein of unknown function DUF885; KEGG: cps:CPS_3202 putative lipoprotein; hypothetical protein	complement(102895..104802)	Shewanella sp. MR-4	4250973
YP_732233.1	CDS	Shewmr4_0095	NC_008321.1	105072	105500	D	PFAM: regulatory protein, MarR; KEGG: hch:HCH_03311 transcriptional regulator; MarR family transcriptional regulator	105072..105500	Shewanella sp. MR-4	4250974
YP_732234.1	CDS	Shewmr4_0096	NC_008321.1	105536	106282	D	PFAM: Siderophore-interacting protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rba:RB11489 vulnibactin utilization protein VIUB; FAD-binding 9, siderophore-interacting domain-containing protein	105536..106282	Shewanella sp. MR-4	4250975
YP_732235.1	CDS	Shewmr4_0097	NC_008321.1	106986	108212	R	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase	complement(106986..108212)	Shewanella sp. MR-4	4250976
YP_732236.1	CDS	Shewmr4_0098	NC_008321.1	108410	109117	D	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: son:SO0096 histidine utilization repressor; histidine utilization repressor	108410..109117	Shewanella sp. MR-4	4250977
YP_732237.1	CDS	Shewmr4_0099	NC_008321.1	109241	110911	D	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase	109241..110911	Shewanella sp. MR-4	4250978
YP_732238.1	CDS	Shewmr4_0100	NC_008321.1	110959	112500	D	catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase	110959..112500	Shewanella sp. MR-4	4250979
YP_732239.1	CDS	Shewmr4_0101	NC_008321.1	113109	113690	D	KEGG: son:SO0098.1 formate dehydrogenase-N, nitrate-inducible, alpha subunit; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase Fe4S4 region; twin-arginine translocation pathway signal	113109..113690	Shewanella sp. MR-4	4250980
YP_732240.1	CDS	Shewmr4_0102	NC_008321.1	113739	116123	D	KEGG: son:SO0101 formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit); TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha	113739..116123	Shewanella sp. MR-4	4250981
YP_732241.1	CDS	Shewmr4_0103	NC_008321.1	116126	117040	D	TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO0102 formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit); formate dehydrogenase subunit beta	116126..117040	Shewanella sp. MR-4	4250982
YP_732242.1	CDS	Shewmr4_0104	NC_008321.1	117037	117678	D	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO0103 formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit); formate dehydrogenase subunit gamma	117037..117678	Shewanella sp. MR-4	4250983
YP_732243.1	CDS	Shewmr4_0105	NC_008321.1	117678	118586	D	TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: son:SO0104 fdhE protein; formate dehydrogenase accessory protein FdhE	117678..118586	Shewanella sp. MR-4	4250984
YP_732244.1	CDS	Shewmr4_0106	NC_008321.1	118635	120065	D	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase	118635..120065	Shewanella sp. MR-4	4250985
YP_732245.1	CDS	Shewmr4_0107	NC_008321.1	120062	122083	D	TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: son:SO0106 selenocysteine-specific translation elongation factor; selenocysteine-specific translation elongation factor SelB	120062..122083	Shewanella sp. MR-4	4250986
YP_732246.1	CDS	Shewmr4_0108	NC_008321.1	122191	123027	D	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein	122191..123027	Shewanella sp. MR-4	4250987
YP_732247.1	CDS	Shewmr4_0109	NC_008321.1	123153	124367	D	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: son:SO0108 hypothetical transporter component; putative inner membrane protein	123153..124367	Shewanella sp. MR-4	4250988
YP_732248.1	CDS	Shewmr4_0110	NC_008321.1	124367	124600	D	PFAM: SirA family protein; KEGG: son:SO0109 hypothetical protein; hypothetical protein	124367..124600	Shewanella sp. MR-4	4250989
YP_732249.1	CDS	Shewmr4_0111	NC_008321.1	124662	126005	R	PFAM: peptidase M48, Ste24p; KEGG: son:SO0110 hypothetical protease; peptidase M48, Ste24p	complement(124662..126005)	Shewanella sp. MR-4	4250990
YP_732250.1	CDS	Shewmr4_0112	NC_008321.1	126122	126736	R	KEGG: son:SO0111 hypothetical protein; hypothetical protein	complement(126122..126736)	Shewanella sp. MR-4	4250991
YP_732251.1	CDS	Shewmr4_0113	NC_008321.1	127068	127454	D	KEGG: son:SO0112 hypothetical protein; hypothetical protein	127068..127454	Shewanella sp. MR-4	4250992
YP_732252.1	CDS	Shewmr4_0114	NC_008321.1	127306	127839	R	KEGG: son:SO0113 hypothetical protein; hypothetical protein	complement(127306..127839)	Shewanella sp. MR-4	4250993
YP_732253.1	CDS	Shewmr4_0115	NC_008321.1	127963	128583	R	KEGG: son:SO0114 hypothetical protein; hypothetical protein	complement(127963..128583)	Shewanella sp. MR-4	4250994
YP_732254.1	CDS	Shewmr4_0116	NC_008321.1	128776	129159	D	PFAM: protein of unknown function DUF1090; KEGG: son:SO0119 hypothetical protein; hypothetical protein	128776..129159	Shewanella sp. MR-4	4250995
YP_732255.1	CDS	Shewmr4_0117	NC_008321.1	129392	130660	D	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO0121 hypothetical small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS	129392..130660	Shewanella sp. MR-4	4250996
YP_732256.1	CDS	Shewmr4_0118	NC_008321.1	130657	131280	R	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO0122 transporter, LysE family; lysine exporter protein LysE/YggA	complement(130657..131280)	Shewanella sp. MR-4	4250997
YP_732257.1	CDS	Shewmr4_0119	NC_008321.1	131306	131866	R	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0123 acyltransferase family protein; phospholipid/glycerol acyltransferase	complement(131306..131866)	Shewanella sp. MR-4	4250998
YP_732258.1	CDS	Shewmr4_0120	NC_008321.1	131996	132445	D	KEGG: son:SO0125 hypothetical protein; hypothetical protein	131996..132445	Shewanella sp. MR-4	4250999
YP_732259.1	CDS	Shewmr4_0121	NC_008321.1	132469	133269	R	PFAM: protein of unknown function DUF833; KEGG: son:SO0126 hypothetical protein; hypothetical protein	complement(132469..133269)	Shewanella sp. MR-4	4251000
YP_732260.1	CDS	Shewmr4_0122	NC_008321.1	133332	134990	R	KEGG: son:SO0127 hypothetical protein; hypothetical protein	complement(133332..134990)	Shewanella sp. MR-4	4251001
YP_732261.1	CDS	Shewmr4_0123	NC_008321.1	135169	135768	R	PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: son:SO0129 conserved hypothetical protein TIGR00427; multiple antibiotic resistance (MarC)-like protein	complement(135169..135768)	Shewanella sp. MR-4	4251002
YP_732262.1	CDS	Shewmr4_0124	NC_008321.1	136100	138955	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xcv:XCV2894 TonB-dependent outer membrane receptor; TonB-dependent receptor	136100..138955	Shewanella sp. MR-4	4251003
YP_732263.1	CDS	Shewmr4_0125	NC_008321.1	139356	142166	D	PFAM: PKD domain containing protein; peptidase M6, immune inhibitor A; KEGG: son:SO0130 protease, putative; peptidase M6, immune inhibitor A	139356..142166	Shewanella sp. MR-4	4250618
YP_732264.1	CDS	Shewmr4_0126	NC_008321.1	142227	142799	R	PFAM: Chorismate lyase; KEGG: son:SO0131 putative chorismate--pyruvate lyase; chorismate lyase	complement(142227..142799)	Shewanella sp. MR-4	4250619
YP_732265.1	CDS	Shewmr4_0127	NC_008321.1	142901	143311	D	PFAM: flagellar basal body-associated protein FliL; KEGG: son:SO0132 flagellar protein FliL, putative; flagellar basal body-associated protein FliL-like protein	142901..143311	Shewanella sp. MR-4	4250620
YP_732266.1	CDS	Shewmr4_0128	NC_008321.1	143371	144465	D	PFAM: protein of unknown function DUF890; KEGG: son:SO0134 hypothetical protein; putative SAM-dependent methyltransferase	143371..144465	Shewanella sp. MR-4	4250621
YP_732267.1	CDS	Shewmr4_0129	NC_008321.1	144508	144804	R	PFAM: protein of unknown function DUF333; KEGG: son:SO0135 hemolysin protein, putative; hypothetical protein	complement(144508..144804)	Shewanella sp. MR-4	4250622
YP_732268.1	CDS	Shewmr4_0130	NC_008321.1	144830	145492	R	KEGG: son:SO0136 hypothetical protein; hypothetical protein	complement(144830..145492)	Shewanella sp. MR-4	4250623
YP_732269.1	CDS	Shewmr4_0131	NC_008321.1	145530	146291	R	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB	complement(145530..146291)	Shewanella sp. MR-4	4250624
YP_732270.1	CDS	Shewmr4_0132	NC_008321.1	146303	147637	R	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: son:SO0138 molybdopterin biosynthesis MoeA protein; molybdopterin molybdochelatase	complement(146303..147637)	Shewanella sp. MR-4	4250625
YP_732271.1	CDS	Shewmr4_0133	NC_008321.1	147885	148421	D	PFAM: Ferritin, Dps family protein; KEGG: son:SO0139 ferritin; Ferritin, Dps family protein	147885..148421	Shewanella sp. MR-4	4250626
YP_732272.1	CDS	Shewmr4_0134	NC_008321.1	148499	151732	R	KEGG: son:SO0141 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	complement(148499..151732)	Shewanella sp. MR-4	4250627
YP_732273.1	CDS	ribB	NC_008321.1	152094	152747	R	DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase	complement(152094..152747)	Shewanella sp. MR-4	4250628
YP_732274.1	CDS	Shewmr4_0136	NC_008321.1	153435	155570	D	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO0144 protease II; oligopeptidase B	153435..155570	Shewanella sp. MR-4	4250629
YP_732275.1	CDS	Shewmr4_0137	NC_008321.1	155593	156012	D	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: son:SO0145 hypothetical URI domain endonuclease; excinuclease ABC subunit C	155593..156012	Shewanella sp. MR-4	4250630
YP_732276.1	CDS	Shewmr4_0138	NC_008321.1	156392	156973	R	hypothetical protein	complement(156392..156973)	Shewanella sp. MR-4	4250631
YP_732277.1	CDS	Shewmr4_0139	NC_008321.1	157532	158434	R	PFAM: regulatory protein, LysR; KEGG: ilo:IL1611 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(157532..158434)	Shewanella sp. MR-4	4250632
YP_732278.1	CDS	Shewmr4_0140	NC_008321.1	158518	159207	D	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ilo:IL1610 acyl carrier protein phosphodiesterase; (Acyl-carrier-protein) phosphodiesterase	158518..159207	Shewanella sp. MR-4	4250633
YP_732279.1	CDS	Shewmr4_0141	NC_008321.1	159200	159673	D	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sco:SCO4974 deaminase; CMP/dCMP deaminase, zinc-binding	159200..159673	Shewanella sp. MR-4	4250634
YP_732280.1	CDS	Shewmr4_0142	NC_008321.1	159659	160162	R	hypothetical protein	complement(159659..160162)	Shewanella sp. MR-4	4250864
YP_732281.1	CDS	Shewmr4_0143	NC_008321.1	160452	161228	R	KEGG: son:SO0150 lipoprotein, putative; putative lipoprotein	complement(160452..161228)	Shewanella sp. MR-4	4250865
YP_732282.1	CDS	Shewmr4_0144	NC_008321.1	161499	162266	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0151 hypothetical SAM-dependent methyltransferase; type 12 methyltransferase	161499..162266	Shewanella sp. MR-4	4250866
YP_732283.1	CDS	Shewmr4_0145	NC_008321.1	162291	164267	R	PFAM: peptidase M14, carboxypeptidase A; KEGG: son:SO0152 hypothetical carboxypeptidase; peptidase M14, carboxypeptidase A	complement(162291..164267)	Shewanella sp. MR-4	4250867
YP_732284.1	CDS	Shewmr4_0146	NC_008321.1	164399	165517	R	KEGG: son:SO0154 hypothetical protein; hypothetical protein	complement(164399..165517)	Shewanella sp. MR-4	4250868
YP_732285.1	CDS	Shewmr4_0147	NC_008321.1	165781	167010	R	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO0157 proton/glutamate symporter; sodium:dicarboxylate symporter	complement(165781..167010)	Shewanella sp. MR-4	4250869
YP_732286.1	CDS	Shewmr4_0148	NC_008321.1	167411	167824	D	KEGG: son:SO0159 hypothetical protein; hypothetical protein	167411..167824	Shewanella sp. MR-4	4250870
YP_732287.1	CDS	Shewmr4_0149	NC_008321.1	167914	169653	R	KEGG: ilo:IL0291 hypothetical protein; hypothetical protein	complement(167914..169653)	Shewanella sp. MR-4	4250871
YP_732288.1	CDS	Shewmr4_0150	NC_008321.1	170060	171523	D	PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_04311 outer membrane protein and related peptidoglycan-associated (LipO)protein; OmpA/MotB domain-containing protein	170060..171523	Shewanella sp. MR-4	4250872
YP_732289.1	CDS	Shewmr4_0151	NC_008321.1	171643	173202	R	PFAM: AbgT putative transporter; short chain fatty acid transporter; KEGG: son:SO0160 transporter, putative; transporter AbgT	complement(171643..173202)	Shewanella sp. MR-4	4250873
YP_732290.1	CDS	Shewmr4_0152	NC_008321.1	173450	174991	R	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase	complement(173450..174991)	Shewanella sp. MR-4	4250874
YP_732291.1	CDS	hslO	NC_008321.1	175193	176053	R	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin	complement(175193..176053)	Shewanella sp. MR-4	4250875
YP_732292.1	CDS	Shewmr4_0154	NC_008321.1	176090	176488	R	PFAM: RNA-binding S4 domain protein; KEGG: son:SO0164 heat shock protein 15; RNA-binding S4 domain-containing protein	complement(176090..176488)	Shewanella sp. MR-4	4250876
YP_732293.1	CDS	Shewmr4_0155	NC_008321.1	176740	177666	D	TIGRFAM: general secretion pathway protein C; KEGG: son:SO0165 general secretion pathway protein C; general secretion pathway protein C	176740..177666	Shewanella sp. MR-4	4250877
YP_732294.1	CDS	Shewmr4_0156	NC_008321.1	177691	179793	D	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D; general secretion pathway protein D	177691..179793	Shewanella sp. MR-4	4250878
YP_732295.1	CDS	Shewmr4_0157	NC_008321.1	179790	181355	D	KEGG: son:SO0167 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; type II secretion system protein E (GspE)	179790..181355	Shewanella sp. MR-4	4250879
YP_732296.1	CDS	Shewmr4_0158	NC_008321.1	181359	182582	D	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F; general secretion pathway protein F	181359..182582	Shewanella sp. MR-4	4250880
YP_732297.1	CDS	Shewmr4_0159	NC_008321.1	182658	183092	D	TIGRFAM: general secretion pathway protein G; PFAM: methylation site containing protein; Bacterial type II secretion system protein G; KEGG: son:SO0169 general secretion pathway protein G; general secretion pathway protein G	182658..183092	Shewanella sp. MR-4	4250881
YP_732298.1	CDS	Shewmr4_0160	NC_008321.1	183154	183666	D	KEGG: son:SO0170 general secretion pathway protein H; general secretion pathway protein H	183154..183666	Shewanella sp. MR-4	4250688
YP_732299.1	CDS	Shewmr4_0161	NC_008321.1	183653	184021	D	TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; methylation site containing protein; KEGG: son:SO0171 general secretion pathway protein I; general secretion pathway protein I	183653..184021	Shewanella sp. MR-4	4250689
YP_732300.1	CDS	Shewmr4_0162	NC_008321.1	184002	184763	D	TIGRFAM: general secretion pathway protein J; PFAM: methylation site containing protein; KEGG: son:SO0172 general secretion pathway protein J; general secretion pathway protein J	184002..184763	Shewanella sp. MR-4	4250690
YP_732301.1	CDS	Shewmr4_0163	NC_008321.1	184760	185758	D	PFAM: General secretion pathway protein K; KEGG: son:SO0173 general secretion pathway protein K; general secretion pathway protein K	184760..185758	Shewanella sp. MR-4	4250691
YP_732302.1	CDS	Shewmr4_0164	NC_008321.1	185807	186994	D	TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: son:SO0174 general secretion pathway protein L; general secretion pathway protein L	185807..186994	Shewanella sp. MR-4	4250692
YP_732303.1	CDS	Shewmr4_0165	NC_008321.1	186996	187472	D	PFAM: General secretion pathway M protein; KEGG: son:SO0175 general secretion pathway protein M; general secretion pathway M protein	186996..187472	Shewanella sp. MR-4	4250693
YP_732304.1	CDS	Shewmr4_0166	NC_008321.1	187487	188248	D	PFAM: type II secretion system protein N; KEGG: son:SO0176 general secretion pathway protein N; type II secretion system protein N	187487..188248	Shewanella sp. MR-4	4250694
YP_732305.1	CDS	Shewmr4_0167	NC_008321.1	188313	188975	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO0177 HAD-superfamily hydrolase, subfamily IA, variant 3 protein family; HAD family hydrolase	complement(188313..188975)	Shewanella sp. MR-4	4250695
YP_732306.1	CDS	Shewmr4_0168	NC_008321.1	189257	189664	D	KEGG: son:SO0189 fibronectin type III domain protein; hypothetical protein	189257..189664	Shewanella sp. MR-4	4250696
YP_732307.1	CDS	nudE	NC_008321.1	189902	190453	D	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE	189902..190453	Shewanella sp. MR-4	4250697
YP_732308.1	CDS	Shewmr4_0170	NC_008321.1	190524	191336	D	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: son:SO0191 cysQ protein; 3'(2'),5'-bisphosphate nucleotidase	190524..191336	Shewanella sp. MR-4	4250698
YP_732309.1	CDS	Shewmr4_0171	NC_008321.1	191343	191786	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0192 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	191343..191786	Shewanella sp. MR-4	4250699
YP_732310.1	CDS	Shewmr4_0172	NC_008321.1	192017	192628	D	PFAM: regulatory protein, TetR; KEGG: son:SO0193 transcriptional regulator, TetR family; TetR family transcriptional regulator	192017..192628	Shewanella sp. MR-4	4250700
YP_732311.1	CDS	Shewmr4_0173	NC_008321.1	192619	194481	D	PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; KEGG: son:SO0194 acyltransferase family protein; phospholipid/glycerol acyltransferase	192619..194481	Shewanella sp. MR-4	4250701
YP_732312.1	CDS	Shewmr4_0174	NC_008321.1	194536	195690	R	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase	complement(194536..195690)	Shewanella sp. MR-4	4250702
YP_732313.1	CDS	Shewmr4_0175	NC_008321.1	195690	196748	R	catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase	complement(195690..196748)	Shewanella sp. MR-4	4250703
YP_732314.1	CDS	Shewmr4_0176	NC_008321.1	196845	197972	R	PFAM: fatty acid desaturase; KEGG: son:SO0197 fatty acid desaturase, family 1; Delta-9 acyl-phospholipid desaturase	complement(196845..197972)	Shewanella sp. MR-4	4250704
YP_732315.1	CDS	Shewmr4_0177	NC_008321.1	198095	198709	D	negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR	198095..198709	Shewanella sp. MR-4	4250722
YP_732316.1	CDS	Shewmr4_0178	NC_008321.1	198779	199876	R	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase	complement(198779..199876)	Shewanella sp. MR-4	4250723
YP_732317.1	CDS	Shewmr4_0179	NC_008321.1	200018	200836	D	converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase	200018..200836	Shewanella sp. MR-4	4250724
YP_732318.1	CDS	Shewmr4_0180	NC_008321.1	200848	201312	R	PFAM: RNP-1 like RNA-binding protein; KEGG: son:SO0208 RNA-binding protein; RNP-1 like RNA-binding protein	complement(200848..201312)	Shewanella sp. MR-4	4250725
YP_732319.1	CDS	murB	NC_008321.1	207421	208476	D	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase	207421..208476	Shewanella sp. MR-4	4250726
YP_732320.1	CDS	Shewmr4_0182	NC_008321.1	208469	209428	D	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase	208469..209428	Shewanella sp. MR-4	4250727
YP_732321.1	CDS	Shewmr4_0183	NC_008321.1	209430	210380	R	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase	complement(209430..210380)	Shewanella sp. MR-4	4250728
YP_732322.1	CDS	Shewmr4_0184	NC_008321.1	210493	210624	D	KEGG: son:SO0216 hypothetical protein; hypothetical protein	210493..210624	Shewanella sp. MR-4	4250729
YP_732323.1	CDS	Shewmr4_0185	NC_008321.1	211092	212276	D	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	211092..212276	Shewanella sp. MR-4	4250730
YP_732324.1	CDS	secE	NC_008321.1	212554	212925	D	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE	212554..212925	Shewanella sp. MR-4	4250731
YP_732325.1	CDS	Shewmr4_0187	NC_008321.1	212935	213486	D	KEGG: son:SO0219 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; transcription antitermination protein nusG	212935..213486	Shewanella sp. MR-4	4250732
YP_732326.1	CDS	rplK	NC_008321.1	213615	214043	D	binds directly to 23S ribosomal RNA; 50S ribosomal protein L11	213615..214043	Shewanella sp. MR-4	4250733
YP_732327.1	CDS	rplA	NC_008321.1	214048	214749	D	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1	214048..214749	Shewanella sp. MR-4	4250734
YP_732328.1	CDS	rplJ	NC_008321.1	215015	215515	D	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10	215015..215515	Shewanella sp. MR-4	4250735
YP_732329.1	CDS	rplL	NC_008321.1	215570	215941	D	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12	215570..215941	Shewanella sp. MR-4	4250736
YP_732330.1	CDS	rpoB	NC_008321.1	216244	220221	D	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta	216244..220221	Shewanella sp. MR-4	4250737
YP_732331.1	CDS	Shewmr4_0193	NC_008321.1	220305	224522	D	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta'	220305..224522	Shewanella sp. MR-4	4250738
YP_732332.1	CDS	rpsL	NC_008321.1	224702	225076	D	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12	224702..225076	Shewanella sp. MR-4	4250739
YP_732333.1	CDS	Shewmr4_0195	NC_008321.1	225157	225627	D	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7	225157..225627	Shewanella sp. MR-4	4250917
YP_732334.1	CDS	Shewmr4_0196	NC_008321.1	225706	227802	D	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G	225706..227802	Shewanella sp. MR-4	4250918
YP_732335.1	CDS	Shewmr4_0197	NC_008321.1	227874	229058	D	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu	227874..229058	Shewanella sp. MR-4	4250919
YP_732336.1	CDS	rpsJ	NC_008321.1	229397	229708	D	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10	229397..229708	Shewanella sp. MR-4	4250920
YP_732337.1	CDS	rplC	NC_008321.1	229736	230374	D	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3	229736..230374	Shewanella sp. MR-4	4250921
YP_732338.1	CDS	rplD	NC_008321.1	230392	230997	D	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4	230392..230997	Shewanella sp. MR-4	4250922
YP_732339.1	CDS	rplW	NC_008321.1	230994	231299	D	binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23	230994..231299	Shewanella sp. MR-4	4250923
YP_732340.1	CDS	rplB	NC_008321.1	231316	232140	D	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2	231316..232140	Shewanella sp. MR-4	4250924
YP_732341.1	CDS	rpsS	NC_008321.1	232155	232433	D	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19	232155..232433	Shewanella sp. MR-4	4250925
YP_732342.1	CDS	rplV	NC_008321.1	232449	232781	D	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22	232449..232781	Shewanella sp. MR-4	4250926
YP_732343.1	CDS	rpsC	NC_008321.1	232791	233483	D	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3	232791..233483	Shewanella sp. MR-4	4250927
YP_732344.1	CDS	rplP	NC_008321.1	233495	233905	D	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16	233495..233905	Shewanella sp. MR-4	4250928
YP_732345.1	CDS	Shewmr4_0207	NC_008321.1	233905	234096	D	one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29	233905..234096	Shewanella sp. MR-4	4250929
YP_732346.1	CDS	rpsQ	NC_008321.1	234096	234344	D	primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17	234096..234344	Shewanella sp. MR-4	4250930
YP_732347.1	CDS	rplN	NC_008321.1	234523	234891	D	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14	234523..234891	Shewanella sp. MR-4	4250931
YP_732348.1	CDS	rplX	NC_008321.1	234903	235217	D	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24	234903..235217	Shewanella sp. MR-4	4250932
YP_732349.1	CDS	rplE	NC_008321.1	235230	235769	D	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5	235230..235769	Shewanella sp. MR-4	4250933
YP_732350.1	CDS	rpsN	NC_008321.1	235780	236085	D	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14	235780..236085	Shewanella sp. MR-4	4250670
YP_732351.1	CDS	rpsH	NC_008321.1	236110	236502	D	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8	236110..236502	Shewanella sp. MR-4	4250671
YP_732352.1	CDS	rplF	NC_008321.1	236513	237046	D	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6	236513..237046	Shewanella sp. MR-4	4250672
YP_732353.1	CDS	rplR	NC_008321.1	237057	237407	D	binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18	237057..237407	Shewanella sp. MR-4	4250673
YP_732354.1	CDS	rpsE	NC_008321.1	237420	237923	D	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5	237420..237923	Shewanella sp. MR-4	4250674
YP_732355.1	CDS	rpmD	NC_008321.1	237930	238112	D	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30	237930..238112	Shewanella sp. MR-4	4250675
YP_732356.1	CDS	rplO	NC_008321.1	238116	238550	D	late assembly protein; 50S ribosomal protein L15	238116..238550	Shewanella sp. MR-4	4250676
YP_732357.1	CDS	secY	NC_008321.1	238558	239898	D	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY	238558..239898	Shewanella sp. MR-4	4250677
YP_732358.1	CDS	rpmJ	NC_008321.1	239920	240033	D	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36	239920..240033	Shewanella sp. MR-4	4250678
YP_732359.1	CDS	rpsM	NC_008321.1	240149	240505	D	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13	240149..240505	Shewanella sp. MR-4	4250679
YP_732360.1	CDS	Shewmr4_0222	NC_008321.1	240520	240912	D	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11	240520..240912	Shewanella sp. MR-4	4250680
YP_732361.1	CDS	rpsD	NC_008321.1	240944	241564	D	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4	240944..241564	Shewanella sp. MR-4	4250681
YP_732362.1	CDS	Shewmr4_0224	NC_008321.1	241589	242578	D	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha	241589..242578	Shewanella sp. MR-4	4250682
YP_732363.1	CDS	rplQ	NC_008321.1	242619	243014	D	is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17	242619..243014	Shewanella sp. MR-4	4250683
YP_732364.1	CDS	Shewmr4_0226	NC_008321.1	243079	244083	R	KEGG: vch:VCA0212 hypothetical protein; hypothetical protein	complement(243079..244083)	Shewanella sp. MR-4	4250684
YP_732365.1	CDS	Shewmr4_0227	NC_008321.1	244196	244681	R	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE	complement(244196..244681)	Shewanella sp. MR-4	4250685
YP_732366.1	CDS	Shewmr4_0228	NC_008321.1	244678	244878	R	PFAM: Heme exporter protein D (CcmD); KEGG: son:SO0260 heme exporter protein CcmD; Heme exporter protein D (CcmD)	complement(244678..244878)	Shewanella sp. MR-4	4250686
YP_732367.1	CDS	Shewmr4_0229	NC_008321.1	244878	245624	R	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: son:SO0261 heme exporter protein CcmC; heme exporter protein CcmC	complement(244878..245624)	Shewanella sp. MR-4	4250687
YP_732368.1	CDS	Shewmr4_0230	NC_008321.1	245626	246312	R	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: son:SO0262 heme exporter protein CcmB; heme exporter protein CcmB	complement(245626..246312)	Shewanella sp. MR-4	4251004
YP_732369.1	CDS	Shewmr4_0231	NC_008321.1	246324	246974	R	ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA	complement(246324..246974)	Shewanella sp. MR-4	4251005
YP_732370.1	CDS	Shewmr4_0232	NC_008321.1	247300	247599	D	PFAM: cytochrome c, class I; KEGG: son:SO0264 cytochrome c; cytochrome c, class I	247300..247599	Shewanella sp. MR-4	4251006
YP_732371.1	CDS	Shewmr4_0233	NC_008321.1	247689	248936	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO0265 cytochrome c-type biogenesis protein CcmH; TPR repeat-containing protein	complement(247689..248936)	Shewanella sp. MR-4	4251007
YP_732372.1	CDS	Shewmr4_0234	NC_008321.1	249336	251315	D	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF	249336..251315	Shewanella sp. MR-4	4251008
YP_732373.1	CDS	Shewmr4_0235	NC_008321.1	251327	251881	D	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: son:SO0267 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE	251327..251881	Shewanella sp. MR-4	4251009
YP_732374.1	CDS	Shewmr4_0236	NC_008321.1	251878	252357	D	PFAM: cytochrome C biogenesis protein; KEGG: son:SO0268 cytochrome c-type biogenesis protein CcmH; cytochrome C biogenesis protein	251878..252357	Shewanella sp. MR-4	4251010
YP_732375.1	CDS	Shewmr4_0237	NC_008321.1	252354	252935	D	PFAM: Redoxin domain protein; KEGG: son:SO0269 thioredoxin, putative; redoxin domain-containing protein	252354..252935	Shewanella sp. MR-4	4251011
YP_732376.1	CDS	Shewmr4_0238	NC_008321.1	258855	259367	D	KEGG: son:SO4492 hypothetical protein; hypothetical protein	258855..259367	Shewanella sp. MR-4	4251012
YP_732377.1	CDS	Shewmr4_0239	NC_008321.1	259406	260722	R	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: son:SO4488 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(259406..260722)	Shewanella sp. MR-4	4251013
YP_732378.1	CDS	Shewmr4_0240	NC_008321.1	260725	261387	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4487 DNA-binding response regulator; two component transcriptional regulator	complement(260725..261387)	Shewanella sp. MR-4	4251014
YP_732379.1	CDS	Shewmr4_0241	NC_008321.1	261387	261653	R	PFAM: Propeptide, PepSY amd peptidase M4; KEGG: son:SO4486 hypothetical protein; peptidase	complement(261387..261653)	Shewanella sp. MR-4	4251015
YP_732380.1	CDS	Shewmr4_0242	NC_008321.1	261646	262209	R	KEGG: son:SO4485 diheme cytochrome c; diheme cytochrome c	complement(261646..262209)	Shewanella sp. MR-4	4251016
YP_732381.1	CDS	Shewmr4_0243	NC_008321.1	262257	262697	R	KEGG: son:SO4484 cytochrome c-type protein Shp; cytochrome c-type protein Shp	complement(262257..262697)	Shewanella sp. MR-4	4251017
YP_732382.1	CDS	Shewmr4_0244	NC_008321.1	262731	263327	R	PFAM: cytochrome B561; KEGG: son:SO4483 cytochrome b, putative; cytochrome B561	complement(262731..263327)	Shewanella sp. MR-4	4251018
YP_732383.1	CDS	Shewmr4_0245	NC_008321.1	263535	263957	D	KEGG: son:SO4482 hypothetical protein; hypothetical protein	263535..263957	Shewanella sp. MR-4	4251019
YP_732384.1	CDS	Shewmr4_0246	NC_008321.1	263986	264474	D	KEGG: son:SO4481 hypothetical protein; hypothetical protein	263986..264474	Shewanella sp. MR-4	4251020
YP_732385.1	CDS	Shewmr4_0247	NC_008321.1	264471	265388	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mfa:Mfla_2592 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(264471..265388)	Shewanella sp. MR-4	4250811
YP_732386.1	CDS	Shewmr4_0248	NC_008321.1	265526	266287	D	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein; short-chain dehydrogenase/reductase SDR	265526..266287	Shewanella sp. MR-4	4250812
YP_732387.1	CDS	Shewmr4_0249	NC_008321.1	266356	267876	R	PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase; aldehyde dehydrogenase	complement(266356..267876)	Shewanella sp. MR-4	4250813
YP_732388.1	CDS	Shewmr4_0250	NC_008321.1	268246	270105	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: son:SO4479 sigma-54 dependent transcriptional regulator; Fis family GAF modulated sigma54 specific transcriptional regulator	268246..270105	Shewanella sp. MR-4	4250814
YP_732389.1	CDS	Shewmr4_0251	NC_008321.1	270164	271513	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4478 sensor protein CpxA; periplasmic sensor signal transduction histidine kinase	complement(270164..271513)	Shewanella sp. MR-4	4250815
YP_732390.1	CDS	Shewmr4_0252	NC_008321.1	271528	272214	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4477 transcriptional regulatory protein CpxR; two component transcriptional regulator	complement(271528..272214)	Shewanella sp. MR-4	4250816
YP_732391.1	CDS	Shewmr4_0253	NC_008321.1	272561	273052	D	PFAM: protein of unknown function, Spy-related; KEGG: son:SO4476 spheroplast protein y precursor, putative; hypothetical protein	272561..273052	Shewanella sp. MR-4	4250817
YP_732392.1	CDS	Shewmr4_0254	NC_008321.1	273103	273996	D	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: son:SO4475 cation efflux family protein; cation diffusion facilitator family transporter	273103..273996	Shewanella sp. MR-4	4250818
YP_732393.1	CDS	Shewmr4_0255	NC_008321.1	274042	274452	D	KEGG: son:SO4474 hypothetical protein; hypothetical protein	274042..274452	Shewanella sp. MR-4	4250819
YP_732394.1	CDS	Shewmr4_0256	NC_008321.1	274640	275197	D	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: son:SO4473 outer membrane protein, putative; OmpA domain-containing protein	274640..275197	Shewanella sp. MR-4	4250820
YP_732395.1	CDS	Shewmr4_0257	NC_008321.1	275266	276681	R	KEGG: son:SO4472 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator, NtrC, Fis family	complement(275266..276681)	Shewanella sp. MR-4	4250821
YP_732396.1	CDS	Shewmr4_0258	NC_008321.1	276719	277765	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: son:SO4471 nitrogen regulation protein; signal transduction histidine kinase, nitrogen specific, NtrB	complement(276719..277765)	Shewanella sp. MR-4	4250822
YP_732397.1	CDS	Shewmr4_0259	NC_008321.1	277887	278420	R	KEGG: son:SO4470 hypothetical protein; hypothetical protein	complement(277887..278420)	Shewanella sp. MR-4	4250823
YP_732398.1	CDS	Shewmr4_0260	NC_008321.1	278694	279851	R	PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO4469 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase	complement(278694..279851)	Shewanella sp. MR-4	4250824
YP_732399.1	CDS	Shewmr4_0261	NC_008321.1	279996	280592	R	PFAM: regulatory protein, TetR; KEGG: son:SO4468 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(279996..280592)	Shewanella sp. MR-4	4250825
YP_732400.1	CDS	Shewmr4_0262	NC_008321.1	280708	281019	R	PFAM: protein of unknown function DUF1255; KEGG: son:SO4467 hypothetical protein; hypothetical protein	complement(280708..281019)	Shewanella sp. MR-4	4250826
YP_732401.1	CDS	Shewmr4_0264	NC_008321.1	283422	285521	R	PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4465 hypothetical protein; hypothetical protein	complement(283422..285521)	Shewanella sp. MR-4	4250827
YP_732402.1	CDS	Shewmr4_0265	NC_008321.1	285868	286257	D	KEGG: son:SO4462 hypothetical protein; hypothetical protein	285868..286257	Shewanella sp. MR-4	4250828
YP_732403.1	CDS	Shewmr4_0266	NC_008321.1	286266	286463	R	KEGG: son:SO4461 hypothetical protein; hypothetical protein	complement(286266..286463)	Shewanella sp. MR-4	4251162
YP_732404.1	CDS	Shewmr4_0267	NC_008321.1	286831	287670	D	PFAM: PfkB domain protein; KEGG: son:SO4458 carbohydrate kinase, PfkB family; ribokinase-like domain-containing protein	286831..287670	Shewanella sp. MR-4	4251163
YP_732405.1	CDS	Shewmr4_0268	NC_008321.1	287979	289436	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO4457 GGDEF domain protein; diguanylate cyclase	287979..289436	Shewanella sp. MR-4	4251164
YP_732406.1	CDS	Shewmr4_0269	NC_008321.1	289540	290235	D	PFAM: 3-alpha; MOSC domain containing protein; KEGG: son:SO4456 hypothetical protein; MOSC domain-containing protein	289540..290235	Shewanella sp. MR-4	4251165
YP_732407.1	CDS	Shewmr4_0270	NC_008321.1	290272	290628	D	KEGG: son:SO4455 hypothetical protein; hypothetical protein	290272..290628	Shewanella sp. MR-4	4251166
YP_732408.1	CDS	Shewmr4_0271	NC_008321.1	290711	292627	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4454 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(290711..292627)	Shewanella sp. MR-4	4251167
YP_732409.1	CDS	Shewmr4_0272	NC_008321.1	292930	294579	R	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: son:SO4453 electron transfer flavoprotein-ubiquinone oxidoreductase, putative; electron-transferring-flavoprotein dehydrogenase	complement(292930..294579)	Shewanella sp. MR-4	4251168
YP_732410.1	CDS	moaA	NC_008321.1	294920	295933	D	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A	294920..295933	Shewanella sp. MR-4	4251169
YP_732411.1	CDS	moaC	NC_008321.1	296046	296525	D	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC	296046..296525	Shewanella sp. MR-4	4251170
YP_732412.1	CDS	Shewmr4_0275	NC_008321.1	296545	296796	D	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: son:SO4450 molybdenum cofactor biosynthesis protein D; molybdopterin synthase subunit MoaD	296545..296796	Shewanella sp. MR-4	4251171
YP_732413.1	CDS	Shewmr4_0276	NC_008321.1	296798	297265	D	PFAM: molybdopterin biosynthesis MoaE; KEGG: son:SO4449 molybdenum cofactor biosynthesis protein E; molybdopterin synthase subunit MoaE	296798..297265	Shewanella sp. MR-4	4251172
YP_732414.1	CDS	Shewmr4_0277	NC_008321.1	297308	298111	D	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: son:SO4448 molybdenum ABC transporter, periplasmic molybdenum-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein	297308..298111	Shewanella sp. MR-4	4251173
YP_732415.1	CDS	Shewmr4_0278	NC_008321.1	298120	298800	D	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4447 molybdenum ABC transporter, permease protein; molybdate ABC transporter inner membrane subunit	298120..298800	Shewanella sp. MR-4	4251174
YP_732416.1	CDS	Shewmr4_0279	NC_008321.1	298781	299884	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4446 molybdenum ABC transporter, ATP-binding protein; ABC transporter-like protein	298781..299884	Shewanella sp. MR-4	4251175
YP_732417.1	CDS	Shewmr4_0280	NC_008321.1	300458	300979	D	KEGG: son:SO4429 hypothetical protein; hypothetical protein	300458..300979	Shewanella sp. MR-4	4251176
YP_732418.1	CDS	Shewmr4_0281	NC_008321.1	301028	301705	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4428 DNA-binding response regulator; two component transcriptional regulator	301028..301705	Shewanella sp. MR-4	4251177
YP_732419.1	CDS	Shewmr4_0282	NC_008321.1	301776	303011	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4427 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	301776..303011	Shewanella sp. MR-4	4251178
YP_732420.1	CDS	Shewmr4_0283	NC_008321.1	303044	303730	D	TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: sdn:Sden_0111 pseudouridine synthase RluA-like protein; pseudouridine synthase Rlu family protein	303044..303730	Shewanella sp. MR-4	4250829
YP_732421.1	CDS	Shewmr4_0284	NC_008321.1	303727	304902	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO4425 GGDEF family protein; diguanylate cyclase	complement(303727..304902)	Shewanella sp. MR-4	4250830
YP_732422.1	CDS	Shewmr4_0285	NC_008321.1	305092	305259	D	PFAM: protein of unknown function UPF0057; KEGG: son:SO4423 hypothetical protein; hypothetical protein	305092..305259	Shewanella sp. MR-4	4250831
YP_732423.1	CDS	Shewmr4_0286	NC_008321.1	305325	307496	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4423.1 hypothetical ferric aerobactin receptor; TonB-dependent receptor	complement(305325..307496)	Shewanella sp. MR-4	4250832
YP_732424.1	CDS	Shewmr4_0287	NC_008321.1	307803	307994	D	KEGG: son:SO4421 hypothetical protein; hypothetical protein	307803..307994	Shewanella sp. MR-4	4250833
YP_732425.1	CDS	Shewmr4_0288	NC_008321.1	308007	308519	R	PFAM: peptidase M23B; KEGG: son:SO4420 peptidase, M23/M37 family; peptidase M23B	complement(308007..308519)	Shewanella sp. MR-4	4250834
YP_732426.1	CDS	Shewmr4_0289	NC_008321.1	308541	309119	R	KEGG: son:SO4419 hypothetical protein; hypothetical protein	complement(308541..309119)	Shewanella sp. MR-4	4250835
YP_732427.1	CDS	Shewmr4_0290	NC_008321.1	309194	309847	R	PFAM: CHAP domain containing protein; KEGG: son:SO4418 trypanothione synthetase domain protein; CHAP domain-containing protein	complement(309194..309847)	Shewanella sp. MR-4	4250836
YP_732428.1	CDS	Shewmr4_0291	NC_008321.1	310037	311107	R	KEGG: rso:RS05497 hypothetical protein; hypothetical protein	complement(310037..311107)	Shewanella sp. MR-4	4250837
YP_732429.1	CDS	Shewmr4_0292	NC_008321.1	311261	311872	D	PFAM: regulatory protein, TetR; KEGG: hch:HCH_03535 transcriptional regulator; TetR family transcriptional regulator	311261..311872	Shewanella sp. MR-4	4250838
YP_732430.1	CDS	Shewmr4_0293	NC_008321.1	311951	313294	R	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter	complement(311951..313294)	Shewanella sp. MR-4	4250839
YP_732431.1	CDS	Shewmr4_0294	NC_008321.1	313578	314756	D	KEGG: son:SO4414 hypothetical protein; hypothetical protein	313578..314756	Shewanella sp. MR-4	4250840
YP_732432.1	CDS	Shewmr4_0295	NC_008321.1	314761	315885	D	PFAM: aminotransferase, class V; KEGG: son:SO4413 hypothetical kynureninase; aminotransferase, class V	314761..315885	Shewanella sp. MR-4	4250841
YP_732433.1	CDS	Shewmr4_0296	NC_008321.1	315958	316281	R	KEGG: son:SO4412 hypothetical protein; hypothetical protein	complement(315958..316281)	Shewanella sp. MR-4	4250842
YP_732434.1	CDS	Shewmr4_0297	NC_008321.1	316466	317713	R	PFAM: sodium:dicarboxylate symporter; KEGG: sdn:Sden_3453 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter	complement(316466..317713)	Shewanella sp. MR-4	4250843
YP_732435.1	CDS	Shewmr4_0298	NC_008321.1	318669	319472	R	PFAM: regulatory protein, TetR; KEGG: son:SO1415 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(318669..319472)	Shewanella sp. MR-4	4250844
YP_732436.1	CDS	Shewmr4_0299	NC_008321.1	319808	321328	D	TIGRFAM: Twin-arginine translocation pathway signal; flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: son:SO1414 flavocytochrome c flavin subunit, putative; flavocytochrome c	319808..321328	Shewanella sp. MR-4	4250845
YP_732437.1	CDS	Shewmr4_0300	NC_008321.1	321332	321703	D	KEGG: son:SO1413 tetraheme cytochrome c, putative; tetraheme cytochrome c	321332..321703	Shewanella sp. MR-4	4250846
YP_732438.1	CDS	Shewmr4_0301	NC_008321.1	321742	322875	D	KEGG: son:SO1412 hypothetical protein; hypothetical protein	321742..322875	Shewanella sp. MR-4	4251915
YP_732439.1	CDS	Shewmr4_0302	NC_008321.1	322984	324066	D	KEGG: son:SO1411 hypothetical protein; hypothetical protein	322984..324066	Shewanella sp. MR-4	4251916
YP_732440.1	CDS	Shewmr4_0303	NC_008321.1	324237	324980	D	KEGG: son:SO1410 hypothetical protein; hypothetical protein	324237..324980	Shewanella sp. MR-4	4251917
YP_732441.1	CDS	Shewmr4_0304	NC_008321.1	325211	327448	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: eca:ECA0876 TonB-dependent ferric aerobactin receptor; TonB-dependent siderophore receptor	complement(325211..327448)	Shewanella sp. MR-4	4251918
YP_732442.1	CDS	glnA	NC_008321.1	327853	329262	R	forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase	complement(327853..329262)	Shewanella sp. MR-4	4251919
YP_732443.1	CDS	Shewmr4_0306	NC_008321.1	330262	332073	D	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: son:SO4408 virulence regulator BipA; GTP-binding protein TypA	330262..332073	Shewanella sp. MR-4	4251920
YP_732444.1	CDS	Shewmr4_0307	NC_008321.1	332448	333455	R	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: vpa:VPA0381 putative transcription regulator; AraC family transcriptional regulator	complement(332448..333455)	Shewanella sp. MR-4	4251921
YP_732445.1	CDS	Shewmr4_0308	NC_008321.1	333593	334354	D	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vpa:VPA0382 putative sorbitol-6-phosphate 2-dehydrogenase; short-chain dehydrogenase/reductase SDR	333593..334354	Shewanella sp. MR-4	4251922
YP_732446.1	CDS	Shewmr4_0309	NC_008321.1	334402	334908	D	KEGG: vpa:VPA0383 hypothetical protein; hypothetical protein	334402..334908	Shewanella sp. MR-4	4251923
YP_732447.1	CDS	Shewmr4_0310	NC_008321.1	334919	335995	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: vpa:VPA0384 hypothetical protein; alcohol dehydrogenase	334919..335995	Shewanella sp. MR-4	4251924
YP_732448.1	CDS	Shewmr4_0311	NC_008321.1	336349	338535	D	KEGG: son:SO4405 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI	336349..338535	Shewanella sp. MR-4	4251925
YP_732449.1	CDS	Shewmr4_0312	NC_008321.1	338620	339867	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4404 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	complement(338620..339867)	Shewanella sp. MR-4	4251926
YP_732450.1	CDS	Shewmr4_0313	NC_008321.1	340043	341776	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, transmembrane region; KEGG: tdn:Tmden_1328 diguanylate cyclase (GGDEF domain); diguanylate cyclase	complement(340043..341776)	Shewanella sp. MR-4	4251927
YP_732451.1	CDS	Shewmr4_0314	NC_008321.1	342020	342673	R	KEGG: son:SO4403 hypothetical protein; hypothetical protein	complement(342020..342673)	Shewanella sp. MR-4	4251928
YP_732452.1	CDS	Shewmr4_0315	NC_008321.1	342703	342924	R	KEGG: son:SO4402 hypothetical protein; hypothetical protein	complement(342703..342924)	Shewanella sp. MR-4	4251929
YP_732453.1	CDS	rbn	NC_008321.1	343006	344019	D	RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN	343006..344019	Shewanella sp. MR-4	4251930
YP_732454.1	CDS	Shewmr4_0317	NC_008321.1	344065	345021	D	PFAM: alpha/beta hydrolase fold; KEGG: son:SO4400 proline iminopeptidase, putative; prolyl aminopeptidase	344065..345021	Shewanella sp. MR-4	4251931
YP_732455.1	CDS	Shewmr4_0318	NC_008321.1	345018	345620	D	KEGG: son:SO4399 hypothetical protein; hypothetical protein	345018..345620	Shewanella sp. MR-4	4251477
YP_732456.1	CDS	Shewmr4_0319	NC_008321.1	345636	346073	D	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase	345636..346073	Shewanella sp. MR-4	4251478
YP_732457.1	CDS	Shewmr4_0320	NC_008321.1	346113	346550	D	TIGRFAM: thioesterase domain, putative; KEGG: son:SO4397 hypothetical acetyltransferase; thioesterase domain-containing protein	346113..346550	Shewanella sp. MR-4	4251479
YP_732458.1	CDS	Shewmr4_0321	NC_008321.1	346684	347280	D	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase	346684..347280	Shewanella sp. MR-4	4251480
YP_732459.1	CDS	Shewmr4_0322	NC_008321.1	347341	347523	R	KEGG: son:SO4395 hypothetical protein; hypothetical protein	complement(347341..347523)	Shewanella sp. MR-4	4251481
YP_732460.1	CDS	Shewmr4_0323	NC_008321.1	347543	347866	R	PFAM: Rhodanese domain protein; KEGG: son:SO4394 phage shock protein E; rhodanese domain-containing protein	complement(347543..347866)	Shewanella sp. MR-4	4251482
YP_732461.1	CDS	Shewmr4_0324	NC_008321.1	347962	348537	R	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: lpp:plpp0134 hypothetical protein; XRE family transcriptional regulator	complement(347962..348537)	Shewanella sp. MR-4	4251483
YP_732462.1	CDS	Shewmr4_0325	NC_008321.1	348672	349832	D	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: xcv:XCV4391 benzoate permease; benzoate transporter	348672..349832	Shewanella sp. MR-4	4251484
YP_732463.1	CDS	Shewmr4_0326	NC_008321.1	349869	351260	R	PFAM: chemotaxis sensory transducer; KEGG: psp:PSPPH_5044 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(349869..351260)	Shewanella sp. MR-4	4251485
YP_732464.1	CDS	Shewmr4_0327	NC_008321.1	351382	351978	R	PFAM: electron transport protein SCO1/SenC; KEGG: pae:PA0114 hypothetical protein; electron transport protein SCO1/SenC	complement(351382..351978)	Shewanella sp. MR-4	4251486
YP_732465.1	CDS	Shewmr4_0328	NC_008321.1	352216	352671	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO4393 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(352216..352671)	Shewanella sp. MR-4	4251487
YP_732466.1	CDS	Shewmr4_0329	NC_008321.1	352957	353388	R	KEGG: plu:plu0332 hypothetical protein; hypothetical protein	complement(352957..353388)	Shewanella sp. MR-4	4251488
YP_732467.1	CDS	Shewmr4_0330	NC_008321.1	353443	353913	R	hypothetical protein	complement(353443..353913)	Shewanella sp. MR-4	4251489
YP_732468.1	CDS	Shewmr4_0331	NC_008321.1	353988	354872	R	KEGG: xac:XAC2266 hypothetical protein; hypothetical protein	complement(353988..354872)	Shewanella sp. MR-4	4251490
YP_732469.1	CDS	Shewmr4_0332	NC_008321.1	355301	355600	R	PFAM: plasmid stabilization system; KEGG: vch:VCA0385 hypothetical protein; plasmid stabilization system protein	complement(355301..355600)	Shewanella sp. MR-4	4251491
YP_732470.1	CDS	Shewmr4_0333	NC_008321.1	355609	355851	R	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: vvy:VV1866 hypothetical protein; prevent-host-death family protein	complement(355609..355851)	Shewanella sp. MR-4	4251492
YP_732471.1	CDS	Shewmr4_0334	NC_008321.1	356036	356779	R	KEGG: son:SO4384 hypothetical protein; hypothetical protein	complement(356036..356779)	Shewanella sp. MR-4	4251493
YP_732472.1	CDS	Shewmr4_0335	NC_008321.1	356790	358043	R	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II	complement(356790..358043)	Shewanella sp. MR-4	4251494
YP_732473.1	CDS	fabG	NC_008321.1	358044	358769	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase	complement(358044..358769)	Shewanella sp. MR-4	4250847
YP_732474.1	CDS	Shewmr4_0337	NC_008321.1	358895	359434	R	KEGG: son:SO4381 thioester dehydrase family protein; thioester dehydrase family protein	complement(358895..359434)	Shewanella sp. MR-4	4250848
YP_732475.1	CDS	Shewmr4_0338	NC_008321.1	359440	360663	R	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I	complement(359440..360663)	Shewanella sp. MR-4	4250849
YP_732476.1	CDS	Shewmr4_0339	NC_008321.1	360760	361500	R	KEGG: son:SO4379 hypothetical protein; hypothetical protein	complement(360760..361500)	Shewanella sp. MR-4	4250850
YP_732477.1	CDS	Shewmr4_0340	NC_008321.1	361505	362812	R	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: son:SO4378 FAD-binding protein; monooxygenase, FAD-binding	complement(361505..362812)	Shewanella sp. MR-4	4250851
YP_732478.1	CDS	Shewmr4_0341	NC_008321.1	362813	365332	R	KEGG: son:SO4377 hypothetical protein; hypothetical protein	complement(362813..365332)	Shewanella sp. MR-4	4250852
YP_732479.1	CDS	Shewmr4_0342	NC_008321.1	365342	366160	R	KEGG: son:SO4376 hypothetical protein; hypothetical protein	complement(365342..366160)	Shewanella sp. MR-4	4250853
YP_732480.1	CDS	Shewmr4_0343	NC_008321.1	366157	366591	R	PFAM: thioesterase superfamily protein; KEGG: son:SO4375 hypothetical 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein	complement(366157..366591)	Shewanella sp. MR-4	4250854
YP_732481.1	CDS	Shewmr4_0344	NC_008321.1	366588	368153	R	PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO4374 histidine ammonia-lyase, putative; histidine ammonia-lyase	complement(366588..368153)	Shewanella sp. MR-4	4250855
YP_732482.1	CDS	Shewmr4_0345	NC_008321.1	368150	369982	R	PFAM: glycosyl transferase, family 2; lipid A biosynthesis acyltransferase; KEGG: son:SO4373 glycosyl transferase, group 2 family protein; glycosyl transferase family protein	complement(368150..369982)	Shewanella sp. MR-4	4250856
YP_732483.1	CDS	Shewmr4_0346	NC_008321.1	369979	370353	R	KEGG: son:SO4372 thioester dehydrase family protein; thioester dehydrase family protein	complement(369979..370353)	Shewanella sp. MR-4	4250857
YP_732484.1	CDS	Shewmr4_0347	NC_008321.1	370346	371710	R	KEGG: son:SO4371 hypothetical protein; hypothetical protein	complement(370346..371710)	Shewanella sp. MR-4	4250858
YP_732485.1	CDS	Shewmr4_0348	NC_008321.1	371707	372255	R	KEGG: son:SO4370 hypothetical protein; hypothetical protein	complement(371707..372255)	Shewanella sp. MR-4	4250859
YP_732486.1	CDS	Shewmr4_0349	NC_008321.1	372255	372503	R	carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein	complement(372255..372503)	Shewanella sp. MR-4	4250860
YP_732487.1	CDS	Shewmr4_0350	NC_008321.1	372513	372767	R	KEGG: son:SO4368 acyl carrier protein, putative; acyl carrier protein	complement(372513..372767)	Shewanella sp. MR-4	4250861
YP_732488.1	CDS	Shewmr4_0351	NC_008321.1	372754	373602	R	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO4367 acyltransferase family protein; phospholipid/glycerol acyltransferase	complement(372754..373602)	Shewanella sp. MR-4	4250862
YP_732489.1	CDS	Shewmr4_0352	NC_008321.1	373595	374332	R	KEGG: son:SO4366 hypothetical protein; hypothetical protein	complement(373595..374332)	Shewanella sp. MR-4	4250863
YP_732490.1	CDS	Shewmr4_0353	NC_008321.1	374689	375585	R	KEGG: son:SO4365 hypothetical protein; hypothetical protein	complement(374689..375585)	Shewanella sp. MR-4	4251547
YP_732491.1	CDS	Shewmr4_0354	NC_008321.1	375764	377854	R	catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG	complement(375764..377854)	Shewanella sp. MR-4	4251548
YP_732492.1	CDS	Shewmr4_0355	NC_008321.1	378221	379246	D	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pfl:PFL_3664 periplasmic sugar-binding domain protein; periplasmic binding protein/LacI transcriptional regulator	378221..379246	Shewanella sp. MR-4	4251549
YP_732493.1	CDS	Shewmr4_0356	NC_008321.1	379266	381092	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; histidine kinase, HAMP region domain protein; KEGG: ilo:IL2535 intracellular signaling protein (GAF,GGDEF domains); diguanylate cyclase	379266..381092	Shewanella sp. MR-4	4251550
YP_732494.1	CDS	Shewmr4_0357	NC_008321.1	381208	381621	D	PFAM: protein of unknown function UPF0153; KEGG: son:SO4354 hypothetical Fe-S-cluster oxidoreductase; hypothetical protein	381208..381621	Shewanella sp. MR-4	4251551
YP_732495.1	CDS	Shewmr4_0358	NC_008321.1	381584	382423	R	KEGG: son:SO4353 hypothetical protein; amino acid ABC transporter periplasmic protein	complement(381584..382423)	Shewanella sp. MR-4	4251552
YP_732496.1	CDS	Shewmr4_0359	NC_008321.1	382594	383910	D	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: son:SO4351 CBS domain protein; hypothetical protein	382594..383910	Shewanella sp. MR-4	4251553
YP_732497.1	CDS	Shewmr4_0360	NC_008321.1	383969	384841	R	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY	complement(383969..384841)	Shewanella sp. MR-4	4251554
YP_732498.1	CDS	Shewmr4_0361	NC_008321.1	385038	386516	D	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase	385038..386516	Shewanella sp. MR-4	4251555
YP_732499.1	CDS	Shewmr4_0362	NC_008321.1	387107	388780	D	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit	387107..388780	Shewanella sp. MR-4	4251556
YP_732500.1	CDS	ilvM	NC_008321.1	388777	389037	D	KEGG: son:SO4346 acetolactate synthase small subunit; acetolactate synthase 2 regulatory subunit	388777..389037	Shewanella sp. MR-4	4251557
YP_732501.1	CDS	Shewmr4_0364	NC_008321.1	389117	390976	D	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase	389117..390976	Shewanella sp. MR-4	4251558
YP_732502.1	CDS	Shewmr4_0365	NC_008321.1	390978	392651	D	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase	390978..392651	Shewanella sp. MR-4	4251559
YP_732503.1	CDS	Shewmr4_0366	NC_008321.1	392794	393927	D	PFAM: aminotransferase, class V; KEGG: son:SO4343 aminotransferase, class V; alanine-glyoxylate aminotransferase	392794..393927	Shewanella sp. MR-4	4251560
YP_732504.1	CDS	Shewmr4_0367	NC_008321.1	393929	394222	D	KEGG: son:SO4342 hypothetical protein; hypothetical protein	393929..394222	Shewanella sp. MR-4	4251561
YP_732505.1	CDS	Shewmr4_0368	NC_008321.1	394536	394772	D	hypothetical protein	394536..394772	Shewanella sp. MR-4	4251562
YP_732506.1	CDS	Shewmr4_0369	NC_008321.1	395222	396046	R	PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO4335 phosphatidylglycerophosphatase B, putative; phosphatidylglycerophosphatase	complement(395222..396046)	Shewanella sp. MR-4	4251563
YP_732507.1	CDS	Shewmr4_0370	NC_008321.1	396122	397594	R	PFAM: Inner membrane CreD family protein; KEGG: son:SO4334 inner membrane protein, putative; hypothetical protein	complement(396122..397594)	Shewanella sp. MR-4	4251564
YP_732508.1	CDS	Shewmr4_0371	NC_008321.1	397757	398284	R	KEGG: son:SO4333 hypothetical protein; hypothetical protein	complement(397757..398284)	Shewanella sp. MR-4	4251932
YP_732509.1	CDS	Shewmr4_0372	NC_008321.1	398519	399685	D	PFAM: protein of unknown function DUF1006; KEGG: son:SO4332 hypothetical protein; hypothetical protein	398519..399685	Shewanella sp. MR-4	4251933
YP_732510.1	CDS	Shewmr4_0373	NC_008321.1	399682	400047	R	KEGG: son:SO4331 hypothetical protein; hypothetical protein	complement(399682..400047)	Shewanella sp. MR-4	4251934
YP_732511.1	CDS	Shewmr4_0374	NC_008321.1	400107	400439	R	KEGG: son:SO4330 hypothetical protein; hypothetical protein	complement(400107..400439)	Shewanella sp. MR-4	4251935
YP_732512.1	CDS	Shewmr4_0375	NC_008321.1	400534	400788	R	PFAM: protein of unknown function DUF526; KEGG: son:SO4329 hypothetical protein; hypothetical protein	complement(400534..400788)	Shewanella sp. MR-4	4251936
YP_732513.1	CDS	Shewmr4_0376	NC_008321.1	401004	403019	D	TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: son:SO4325 ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep	401004..403019	Shewanella sp. MR-4	4251937
YP_732514.1	CDS	Shewmr4_0377	NC_008321.1	403049	405679	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: son:SO4324 GGDEF domain protein; diguanylate cyclase/phosphodiesterase with GAF sensor	complement(403049..405679)	Shewanella sp. MR-4	4251938
YP_732515.1	CDS	Shewmr4_0378	NC_008321.1	406591	408510	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO4323 GGDEF domain protein; diguanylate cyclase/phosphodiesterase	complement(406591..408510)	Shewanella sp. MR-4	4251939
YP_732516.1	CDS	Shewmr4_0379	NC_008321.1	408519	409226	R	KEGG: son:SO4322 hypothetical protein; hypothetical protein	complement(408519..409226)	Shewanella sp. MR-4	4251940
YP_732517.1	CDS	Shewmr4_0380	NC_008321.1	409245	409853	R	PFAM: OmpA/MotB domain protein; KEGG: son:SO4321 OmpA family protein; OmpA/MotB domain-containing protein	complement(409245..409853)	Shewanella sp. MR-4	4251941
YP_732518.1	CDS	Shewmr4_0381	NC_008321.1	409850	411265	R	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: son:SO4320 agglutination protein; TolC family type I secretion outer membrane protein	complement(409850..411265)	Shewanella sp. MR-4	4251942
YP_732519.1	CDS	Shewmr4_0382	NC_008321.1	411292	412674	R	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: son:SO4319 HlyD family secretion protein; HlyD family type I secretion membrane fusion protein	complement(411292..412674)	Shewanella sp. MR-4	4251943
YP_732520.1	CDS	Shewmr4_0383	NC_008321.1	412671	414848	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4318 toxin secretion ATP-binding protein; ABC transporter-like protein	complement(412671..414848)	Shewanella sp. MR-4	4251944
YP_732521.1	CDS	Shewmr4_0384	NC_008321.1	414937	431265	R	TIGRFAM: putative outer membrane adhesin like protein; PFAM: Hemolysin-type calcium-binding region; KEGG: son:SO4317 RTX toxin, putative; putative outer membrane adhesin like protein	complement(414937..431265)	Shewanella sp. MR-4	4251945
YP_732522.1	CDS	Shewmr4_0385	NC_008321.1	431571	432737	R	PFAM: HemY domain protein; KEGG: son:SO4316 HemY protein; HemY domain-containing protein	complement(431571..432737)	Shewanella sp. MR-4	4251946
YP_732523.1	CDS	Shewmr4_0386	NC_008321.1	432734	433963	R	PFAM: protein of unknown function DUF513, hemX; KEGG: son:SO4315 hemX protein; hypothetical protein	complement(432734..433963)	Shewanella sp. MR-4	4251947
YP_732524.1	CDS	Shewmr4_0387	NC_008321.1	434024	434722	R	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: son:SO4314 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4	complement(434024..434722)	Shewanella sp. MR-4	4251948
YP_732525.1	CDS	hemC	NC_008321.1	434769	435701	R	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase	complement(434769..435701)	Shewanella sp. MR-4	4251721
YP_732526.1	CDS	cyaA	NC_008321.1	435904	438318	D	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase	435904..438318	Shewanella sp. MR-4	4251722
YP_732527.1	CDS	Shewmr4_0390	NC_008321.1	438358	438687	R	PFAM: Frataxin family protein; KEGG: son:SO4311 CyaY protein; frataxin family protein	complement(438358..438687)	Shewanella sp. MR-4	4251723
YP_732528.1	CDS	Shewmr4_0391	NC_008321.1	438992	440236	D	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4309 diaminopimelate decarboxylase; diaminopimelate decarboxylase	438992..440236	Shewanella sp. MR-4	4251724
YP_732529.1	CDS	dapF	NC_008321.1	440307	441134	D	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase	440307..441134	Shewanella sp. MR-4	4251725
YP_732530.1	CDS	Shewmr4_0393	NC_008321.1	441131	441766	D	PFAM: protein of unknown function DUF484; KEGG: son:SO4307 hypothetical protein; hypothetical protein	441131..441766	Shewanella sp. MR-4	4251726
YP_732531.1	CDS	Shewmr4_0394	NC_008321.1	441815	442714	D	TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO4306 integrase/recombinase XerC; tyrosine recombinase XerC	441815..442714	Shewanella sp. MR-4	4251727
YP_732532.1	CDS	Shewmr4_0395	NC_008321.1	442714	443436	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; HAD family hydrolase	442714..443436	Shewanella sp. MR-4	4251728
YP_732533.1	CDS	Shewmr4_0396	NC_008321.1	443582	444160	D	PFAM: HupE/UreJ protein; KEGG: son:SO4304 urease accessory protein UreJ; HupE/UreJ protein	443582..444160	Shewanella sp. MR-4	4251729
YP_732534.1	CDS	Shewmr4_0397	NC_008321.1	444165	444668	R	PFAM: AAA-4 family protein; KEGG: son:SO4303 hypothetical protein; putative transcriptional regulator	complement(444165..444668)	Shewanella sp. MR-4	4251730
YP_732535.1	CDS	Shewmr4_0398	NC_008321.1	444767	445513	R	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: son:SO4302 hypothetical protein; hemerythrin HHE cation binding domain-containing protein	complement(444767..445513)	Shewanella sp. MR-4	4251731
YP_732536.1	CDS	fis	NC_008321.1	445757	446062	R	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis	complement(445757..446062)	Shewanella sp. MR-4	4251732
YP_732537.1	CDS	Shewmr4_0400	NC_008321.1	446079	447047	R	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: son:SO0394 tRNA-dihydrouridine synthase B; nifR3 family TIM-barrel protein	complement(446079..447047)	Shewanella sp. MR-4	4251733
YP_732538.1	CDS	prmA	NC_008321.1	447222	448103	R	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase	complement(447222..448103)	Shewanella sp. MR-4	4251734
YP_732539.1	CDS	Shewmr4_0402	NC_008321.1	448546	449271	D	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit	448546..449271	Shewanella sp. MR-4	4251735
YP_732540.1	CDS	Shewmr4_0403	NC_008321.1	449478	450149	D	PFAM: fumarate reductase respiratory complex, transmembrane subunit; KEGG: son:SO0397 fumarate reductase cytochrome B subunit; fumarate reductase respiratory complex, transmembrane subunit	449478..450149	Shewanella sp. MR-4	4251736
YP_732541.1	CDS	Shewmr4_0404	NC_008321.1	450211	452217	D	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit	450211..452217	Shewanella sp. MR-4	4251737
YP_732542.1	CDS	frdB	NC_008321.1	452217	452948	D	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit	452217..452948	Shewanella sp. MR-4	4251738
YP_732543.1	CDS	Shewmr4_0406	NC_008321.1	453013	453297	R	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0400 hypothetical protein; antibiotic biosynthesis monooxygenase	complement(453013..453297)	Shewanella sp. MR-4	4251949
YP_732544.1	CDS	Shewmr4_0407	NC_008321.1	453294	454316	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO0401 alcohol dehydrogenase, zinc-containing; NADPH:quinone reductase	complement(453294..454316)	Shewanella sp. MR-4	4251950
YP_732545.1	CDS	Shewmr4_0408	NC_008321.1	454434	455351	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0402 transcriptional regulator, LysR family; LysR family transcriptional regulator	454434..455351	Shewanella sp. MR-4	4251951
YP_732546.1	CDS	rho	NC_008321.1	455535	456800	R	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho	complement(455535..456800)	Shewanella sp. MR-4	4251952
YP_732547.1	CDS	Shewmr4_0410	NC_008321.1	457012	457338	R	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0406 thioredoxin 1; thioredoxin	complement(457012..457338)	Shewanella sp. MR-4	4251953
YP_732548.1	CDS	Shewmr4_0411	NC_008321.1	457491	458810	D	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB	457491..458810	Shewanella sp. MR-4	4251954
YP_732549.1	CDS	Shewmr4_0412	NC_008321.1	458811	459737	D	PFAM: Ppx/GppA phosphatase; KEGG: son:SO0408 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Ppx/GppA phosphatase	458811..459737	Shewanella sp. MR-4	4251955
YP_732550.1	CDS	Shewmr4_0413	NC_008321.1	459811	460347	R	KEGG: son:SO0409 hypothetical protein; hypothetical protein	complement(459811..460347)	Shewanella sp. MR-4	4251956
YP_732551.1	CDS	Shewmr4_0414	NC_008321.1	460496	460894	R	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: son:SO0410 mutator mutT protein; mutator MutT protein	complement(460496..460894)	Shewanella sp. MR-4	4251957
YP_732552.1	CDS	Shewmr4_0415	NC_008321.1	460939	461148	R	PFAM: protein of unknown function DUF329; KEGG: son:SO0411 hypothetical protein; hypothetical protein	complement(460939..461148)	Shewanella sp. MR-4	4251958
YP_732553.1	CDS	Shewmr4_0416	NC_008321.1	461271	462005	R	PFAM: protein of unknown function DUF1342; KEGG: son:SO0412 hypothetical protein; hypothetical protein	complement(461271..462005)	Shewanella sp. MR-4	4251959
YP_732554.1	CDS	coaE	NC_008321.1	461998	462615	R	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase	complement(461998..462615)	Shewanella sp. MR-4	4251960
YP_732555.1	CDS	Shewmr4_0418	NC_008321.1	462703	463629	R	PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: son:SO0414 leader peptidase (prepilin peptidase) / N-methyltransferase; type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A	complement(462703..463629)	Shewanella sp. MR-4	4251961
YP_732556.1	CDS	Shewmr4_0419	NC_008321.1	463685	464950	R	PFAM: type II secretion system protein; KEGG: son:SO0415 type IV pilus biogenesis protein PilC; type II secretion system protein	complement(463685..464950)	Shewanella sp. MR-4	4251962
YP_732557.1	CDS	Shewmr4_0420	NC_008321.1	465080	466789	R	TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: son:SO0416 type IV pilus biogenesis protein PilB; type IV-A pilus assembly ATPase PilB	complement(465080..466789)	Shewanella sp. MR-4	4251963
YP_732558.1	CDS	Shewmr4_0421	NC_008321.1	466963	468294	D	PFAM: O-antigen polymerase; KEGG: eli:ELI_00020 hypothetical protein; O-antigen polymerase	466963..468294	Shewanella sp. MR-4	4251964
YP_732559.1	CDS	Shewmr4_0422	NC_008321.1	468345	468716	R	PFAM: methylation site containing protein; KEGG: tbd:Tbd_2200 pilus assembly protein PilA; methylation site containing protein	complement(468345..468716)	Shewanella sp. MR-4	4251965
YP_732560.1	CDS	Shewmr4_0423	NC_008321.1	469613	471286	R	PFAM: O-antigen polymerase; KEGG: vch:VC0393 hypothetical protein; O-antigen polymerase	complement(469613..471286)	Shewanella sp. MR-4	4251897
YP_732561.1	CDS	Shewmr4_0424	NC_008321.1	471348	472226	R	KEGG: sdn:Sden_3387 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase	complement(471348..472226)	Shewanella sp. MR-4	4251898
YP_732562.1	CDS	Shewmr4_0425	NC_008321.1	472477	473016	D	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: son:SO0421 AmpD protein; N-acetyl-anhydromuranmyl-L-alanine amidase	472477..473016	Shewanella sp. MR-4	4251899
YP_732563.1	CDS	Shewmr4_0426	NC_008321.1	473097	473948	D	involved in regulation of beta-lactamase; putative signaling protein; regulatory protein AmpE	473097..473948	Shewanella sp. MR-4	4251900
YP_732564.1	CDS	pdhR	NC_008321.1	474586	475338	D	activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR	474586..475338	Shewanella sp. MR-4	4251901
YP_732565.1	CDS	aceE	NC_008321.1	475419	478085	D	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1	475419..478085	Shewanella sp. MR-4	4251902
YP_732566.1	CDS	Shewmr4_0429	NC_008321.1	478098	480119	D	KEGG: son:SO0425 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase	478098..480119	Shewanella sp. MR-4	4251903
YP_732567.1	CDS	Shewmr4_0430	NC_008321.1	480269	481696	D	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase	480269..481696	Shewanella sp. MR-4	4251904
YP_732568.1	CDS	Shewmr4_0431	NC_008321.1	482077	486561	D	KEGG: son:SO0427 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	482077..486561	Shewanella sp. MR-4	4251905
YP_732569.1	CDS	Shewmr4_0432	NC_008321.1	486792	489008	D	PFAM: surface antigen (D15); Patatin; KEGG: son:SO0428 hypothetical protein; patatin	486792..489008	Shewanella sp. MR-4	4251906
YP_732570.1	CDS	Shewmr4_0433	NC_008321.1	489219	491261	D	PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO0429 peptidase, M13 family; endothelin-converting protein 1	489219..491261	Shewanella sp. MR-4	4251907
YP_732571.1	CDS	Shewmr4_0434	NC_008321.1	491301	492104	R	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	complement(491301..492104)	Shewanella sp. MR-4	4251908
YP_732572.1	CDS	Shewmr4_0435	NC_008321.1	492134	492529	R	KEGG: dde:Dde_2987 transposase; transposase	complement(492134..492529)	Shewanella sp. MR-4	4251909
YP_732573.1	CDS	Shewmr4_0436	NC_008321.1	492634	493290	R	YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase	complement(492634..493290)	Shewanella sp. MR-4	4251910
YP_732574.1	CDS	Shewmr4_0437	NC_008321.1	493650	496322	D	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	493650..496322	Shewanella sp. MR-4	4251911
YP_732575.1	CDS	Shewmr4_0438	NC_008321.1	496502	496999	R	binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor	complement(496502..496999)	Shewanella sp. MR-4	4251912
YP_732576.1	CDS	hemE	NC_008321.1	497447	498511	D	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase	497447..498511	Shewanella sp. MR-4	4251913
YP_732577.1	CDS	Shewmr4_0440	NC_008321.1	498888	501458	D	KEGG: son:SO0437 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	498888..501458	Shewanella sp. MR-4	4251914
YP_732578.1	CDS	Shewmr4_0441	NC_008321.1	501534	502337	D	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO0438 short chain dehydrogenase; short chain dehydrogenase	501534..502337	Shewanella sp. MR-4	4251565
YP_732579.1	CDS	Shewmr4_0442	NC_008321.1	502341	502565	R	KEGG: son:SO0439 hypothetical protein; hypothetical protein	complement(502341..502565)	Shewanella sp. MR-4	4251566
YP_732580.1	CDS	Shewmr4_0443	NC_008321.1	502722	505943	R	KEGG: son:SO0440 hypothetical protein; hypothetical protein	complement(502722..505943)	Shewanella sp. MR-4	4251567
YP_732581.1	CDS	Shewmr4_0444	NC_008321.1	506125	507423	R	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase	complement(506125..507423)	Shewanella sp. MR-4	4251568
YP_732582.1	CDS	purH	NC_008321.1	507529	509127	R	involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	complement(507529..509127)	Shewanella sp. MR-4	4251569
YP_732583.1	CDS	zntR	NC_008321.1	509465	509938	D	mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator	509465..509938	Shewanella sp. MR-4	4251570
YP_732584.1	CDS	Shewmr4_0447	NC_008321.1	509941	511431	D	PFAM: permease; KEGG: son:SO0444 hypothetical protein; permease	509941..511431	Shewanella sp. MR-4	4251571
YP_732585.1	CDS	Shewmr4_0448	NC_008321.1	511538	512425	R	PFAM: band 7 protein; KEGG: son:SO0445 HflC protein, putative; hypothetical protein	complement(511538..512425)	Shewanella sp. MR-4	4251572
YP_732586.1	CDS	Shewmr4_0449	NC_008321.1	512766	513020	D	KEGG: son:SO0447 hypothetical protein; hypothetical protein	512766..513020	Shewanella sp. MR-4	4251573
YP_732587.1	CDS	Shewmr4_0450	NC_008321.1	513024	513314	D	KEGG: son:SO0448 hypothetical protein; hypothetical protein	513024..513314	Shewanella sp. MR-4	4251574
YP_732588.1	CDS	Shewmr4_0451	NC_008321.1	513321	514940	D	PFAM: PepSY-associated TM helix domain protein; KEGG: son:SO0449 hypothetical protein; PepSY-associated TM helix domain-containing protein	513321..514940	Shewanella sp. MR-4	4251575
YP_732589.1	CDS	Shewmr4_0452	NC_008321.1	514987	516159	R	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0450 major facilitator family protein; major facilitator transporter	complement(514987..516159)	Shewanella sp. MR-4	4251576
YP_732590.1	CDS	Shewmr4_0453	NC_008321.1	516381	517418	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: vpa:VPA0476 hypothetical protein; diguanylate cyclase with GAF sensor	complement(516381..517418)	Shewanella sp. MR-4	4251577
YP_732591.1	CDS	Shewmr4_0454	NC_008321.1	517717	517980	D	hypothetical protein	517717..517980	Shewanella sp. MR-4	4251578
YP_732592.1	CDS	Shewmr4_0455	NC_008321.1	518068	519471	D	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vch:VCA0025 transporter, NadC family; anion transporter	518068..519471	Shewanella sp. MR-4	4251579
YP_732593.1	CDS	Shewmr4_0456	NC_008321.1	519540	519962	R	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0452 thioredoxin 2; thioredoxin	complement(519540..519962)	Shewanella sp. MR-4	4251580
YP_732594.1	CDS	Shewmr4_0457	NC_008321.1	520152	520487	D	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0453 peptidyl-prolyl cis-trans isomerase FkbP; peptidylprolyl isomerase, FKBP-type	520152..520487	Shewanella sp. MR-4	4251581
YP_732595.1	CDS	Shewmr4_0458	NC_008321.1	520634	521620	D	KEGG: chy:CHY_1906 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; diguanylate cyclase with PAS/PAC sensor	520634..521620	Shewanella sp. MR-4	4250793
YP_732596.1	CDS	Shewmr4_0459	NC_008321.1	521667	522065	R	KEGG: son:SO0454 hypothetical protein; hypothetical protein	complement(521667..522065)	Shewanella sp. MR-4	4250794
YP_732597.1	CDS	Shewmr4_0460	NC_008321.1	522099	524132	R	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO0455 hypothetical transporter; TRAP transporter, 4TM/12TM fusion protein	complement(522099..524132)	Shewanella sp. MR-4	4250795
YP_732598.1	CDS	Shewmr4_0461	NC_008321.1	524240	525196	R	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: son:SO0456 immunogenic-related protein; TRAP transporter solute receptor TAXI family protein	complement(524240..525196)	Shewanella sp. MR-4	4250796
YP_732599.1	CDS	Shewmr4_0462	NC_008321.1	525699	525833	R	KEGG: son:SO0458 hypothetical protein; hypothetical protein	complement(525699..525833)	Shewanella sp. MR-4	4250797
YP_732600.1	CDS	Shewmr4_0463	NC_008321.1	526135	527628	R	PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: son:SO0459 hypothetical protein; hypothetical protein	complement(526135..527628)	Shewanella sp. MR-4	4250798
YP_732601.1	CDS	Shewmr4_0464	NC_008321.1	528088	528321	D	KEGG: son:SO0461 hypothetical protein; hypothetical protein	528088..528321	Shewanella sp. MR-4	4250799
YP_732602.1	CDS	Shewmr4_0465	NC_008321.1	528333	528758	D	KEGG: son:SO0462 hypothetical protein; hypothetical protein	528333..528758	Shewanella sp. MR-4	4250800
YP_732603.1	CDS	Shewmr4_0466	NC_008321.1	528806	529687	D	PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: son:SO0463 hypothetical protein; hypothetical protein	528806..529687	Shewanella sp. MR-4	4250801
YP_732604.1	CDS	Shewmr4_0467	NC_008321.1	529716	530123	D	PFAM: NUDIX hydrolase; KEGG: son:SO0464 MutT/nudix family protein; NUDIX hydrolase	529716..530123	Shewanella sp. MR-4	4250802
YP_732605.1	CDS	Shewmr4_0468	NC_008321.1	530166	531170	D	PFAM: SEC-C motif domain protein; KEGG: ppr:PBPRA0194 hypothetical protein; SecC motif-containing protein	530166..531170	Shewanella sp. MR-4	4250803
YP_732606.1	CDS	Shewmr4_0469	NC_008321.1	531181	532299	D	KEGG: hch:HCH_06329 hypothetical protein; hypothetical protein	531181..532299	Shewanella sp. MR-4	4250804
YP_732607.1	CDS	Shewmr4_0470	NC_008321.1	532446	533759	R	KEGG: vvy:VV0261 hypothetical protein; hypothetical protein	complement(532446..533759)	Shewanella sp. MR-4	4250805
YP_732608.1	CDS	Shewmr4_0471	NC_008321.1	534479	536794	R	KEGG: vpa:VPA1255 hypothetical protein; hypothetical protein	complement(534479..536794)	Shewanella sp. MR-4	4250806
YP_732609.1	CDS	Shewmr4_0472	NC_008321.1	536800	537042	R	KEGG: psp:PSPPH_0607 hypothetical protein; hypothetical protein	complement(536800..537042)	Shewanella sp. MR-4	4250807
YP_732610.1	CDS	uvrD	NC_008321.1	537637	539805	D	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II	537637..539805	Shewanella sp. MR-4	4250808
YP_732611.1	CDS	ubiA	NC_008321.1	539931	540791	D	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase	539931..540791	Shewanella sp. MR-4	4250809
YP_732612.1	CDS	Shewmr4_0475	NC_008321.1	540860	541114	R	hypothetical protein	complement(540860..541114)	Shewanella sp. MR-4	4250810
YP_732613.1	CDS	Shewmr4_0476	NC_008321.1	541423	542484	D	PFAM: dihydroorotate dehydrogenase; 2-nitropropane dioxygenase, NPD; KEGG: son:SO0471 hypothetical dioxygenase; 2-nitropropane dioxygenase, NPD	541423..542484	Shewanella sp. MR-4	4250900
YP_732614.1	CDS	Shewmr4_0477	NC_008321.1	542631	543785	D	KEGG: sdn:Sden_3320 hypothetical protein; hypothetical protein	542631..543785	Shewanella sp. MR-4	4250901
YP_732615.1	CDS	Shewmr4_0478	NC_008321.1	544028	544948	D	PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: cps:CPS_0994 hypothetical protein; redoxin domain-containing protein	544028..544948	Shewanella sp. MR-4	4250902
YP_732616.1	CDS	Shewmr4_0479	NC_008321.1	545166	546284	D	PFAM: protein of unknown function UPF0118; KEGG: son:SO0472 hypothetical protein; hypothetical protein	545166..546284	Shewanella sp. MR-4	4250903
YP_732617.1	CDS	Shewmr4_0480	NC_008321.1	546281	546571	R	KEGG: xcv:XCV4020 putative mitomycin resistance protein; putative mitomycin resistance protein	complement(546281..546571)	Shewanella sp. MR-4	4250904
YP_732618.1	CDS	Shewmr4_0481	NC_008321.1	546640	547686	R	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO4003 response regulator; response regulator receiver modulated metal dependent phosphohydrolase	complement(546640..547686)	Shewanella sp. MR-4	4250905
YP_732619.1	CDS	Shewmr4_0482	NC_008321.1	548242	553287	D	KEGG: son:SO4002 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; extracellular solute-binding protein, family 3; multi-sensor hybrid histidine kinase	548242..553287	Shewanella sp. MR-4	4250906
YP_732620.1	CDS	Shewmr4_0483	NC_008321.1	553278	554852	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; KEGG: son:SO3999 sensor histidine kinase; response regulator receiver sensor signal transduction histidine kinase	553278..554852	Shewanella sp. MR-4	4250907
YP_732621.1	CDS	Shewmr4_0484	NC_008321.1	554997	555575	R	KEGG: son:SO0474 hypothetical protein; hypothetical protein	complement(554997..555575)	Shewanella sp. MR-4	4250908
YP_732622.1	CDS	Shewmr4_0485	NC_008321.1	555838	556422	R	PFAM: Redoxin domain protein; KEGG: son:SO0476 thioredoxin, putative; redoxin domain-containing protein	complement(555838..556422)	Shewanella sp. MR-4	4250909
YP_732623.1	CDS	Shewmr4_0486	NC_008321.1	556479	556913	R	PFAM: cytochrome C biogenesis protein; KEGG: son:SO0477 cytochrome c-type biogenesis protein NrfF precursor; cytochrome C biogenesis protein	complement(556479..556913)	Shewanella sp. MR-4	4250910
YP_732624.1	CDS	Shewmr4_0487	NC_008321.1	556910	558949	R	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF	complement(556910..558949)	Shewanella sp. MR-4	4250911
YP_732625.1	CDS	Shewmr4_0488	NC_008321.1	559496	561625	D	KEGG: son:SO0479 cytochrome c, putative; cytochrome c	559496..561625	Shewanella sp. MR-4	4250912
YP_732626.1	CDS	Shewmr4_0489	NC_008321.1	561684	562127	D	SMART: Rhodanese domain protein; KEGG: son:SO0480 hypothetical protein; rhodanese domain-containing protein	561684..562127	Shewanella sp. MR-4	4250913
YP_732627.1	CDS	Shewmr4_0490	NC_008321.1	562221	563000	D	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0481 peptidyl-prolyl cis-trans isomerase, FKBP-type; FKBP-type peptidyl-prolyl isomerase domain-containing protein	562221..563000	Shewanella sp. MR-4	4250914
YP_732628.1	CDS	Shewmr4_0491	NC_008321.1	563065	563739	D	KEGG: son:SO0482 formate-dependent nitrite reductase, NrfG protein; formate-dependent nitrite reductase, NrfG protein	563065..563739	Shewanella sp. MR-4	4250915
YP_732629.1	CDS	Shewmr4_0492	NC_008321.1	563826	564533	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO0483 formate-dependent nitrite reductase, NrfC protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	563826..564533	Shewanella sp. MR-4	4250916
YP_732630.1	CDS	Shewmr4_0493	NC_008321.1	564536	565483	D	PFAM: Polysulphide reductase, NrfD; KEGG: son:SO0484 formate-dependent nitrite reductase, NrfD protein; polysulfide reductase, NrfD	564536..565483	Shewanella sp. MR-4	4251739
YP_732631.1	CDS	Shewmr4_0494	NC_008321.1	565603	566094	D	PFAM: NosL family protein; KEGG: son:SO0485 NosL protein; NosL family protein	565603..566094	Shewanella sp. MR-4	4251740
YP_732632.1	CDS	Shewmr4_0495	NC_008321.1	566104	567393	D	PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: son:SO0486 copper ABC transporter, periplasmic copper-binding protein; periplasmic copper-binding	566104..567393	Shewanella sp. MR-4	4251741
YP_732633.1	CDS	Shewmr4_0496	NC_008321.1	567374	568420	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0487 copper ABC transporter, ATP-binding protein; ABC transporter-like protein	567374..568420	Shewanella sp. MR-4	4251742
YP_732634.1	CDS	Shewmr4_0497	NC_008321.1	568417	569304	D	KEGG: son:SO0488 copper ABC transporter, permease protein; copper ABC transporter permease	568417..569304	Shewanella sp. MR-4	4251743
YP_732635.1	CDS	Shewmr4_0498	NC_008321.1	569518	570801	D	PFAM: transcriptional regulator domain protein; KEGG: son:SO0490 transcriptional regulator; lysine decarboxylase transcriptional regulator, CadC	569518..570801	Shewanella sp. MR-4	4251744
YP_732636.1	CDS	Shewmr4_0499	NC_008321.1	571034	573166	D	PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO0491 peptidase, M13 family; endothelin-converting protein 1	571034..573166	Shewanella sp. MR-4	4251745
YP_732637.1	CDS	Shewmr4_0500	NC_008321.1	573209	575602	R	PFAM: fatty acid cistrans isomerase; KEGG: vvy:VVA0636 fatty acid cis/trans isomerase; fatty acid cistrans isomerase	complement(573209..575602)	Shewanella sp. MR-4	4251746
YP_732638.1	CDS	Shewmr4_0501	NC_008321.1	575886	580832	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: son:SO4539 serine protease, subtilase family; peptidase S8/S53 subtilisin kexin sedolisin	575886..580832	Shewanella sp. MR-4	4251747
YP_732639.1	CDS	Shewmr4_0502	NC_008321.1	580981	581607	D	KEGG: son:SO0492 hypothetical flavoprotein oxygenase; flavoprotein oxygenase	580981..581607	Shewanella sp. MR-4	4251748
YP_732640.1	CDS	Shewmr4_0503	NC_008321.1	582004	583914	R	hypothetical protein	complement(582004..583914)	Shewanella sp. MR-4	4251749
YP_732641.1	CDS	Shewmr4_0504	NC_008321.1	584225	585238	D	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3360 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein	584225..585238	Shewanella sp. MR-4	4251750
YP_732642.1	CDS	fre	NC_008321.1	585638	586336	R	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase	complement(585638..586336)	Shewanella sp. MR-4	4251751
YP_732643.1	CDS	Shewmr4_0506	NC_008321.1	586447	587928	R	TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: son:SO0506 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4hydroxybenzoate decarboxylase	complement(586447..587928)	Shewanella sp. MR-4	4251752
YP_732644.1	CDS	Shewmr4_0507	NC_008321.1	588087	588857	D	KEGG: son:SO0508 hypothetical protein; hypothetical protein	588087..588857	Shewanella sp. MR-4	4251753
YP_732645.1	CDS	Shewmr4_0508	NC_008321.1	588949	590160	D	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr4870 MFS permease; major facilitator transporter	588949..590160	Shewanella sp. MR-4	4251754
YP_732646.1	CDS	Shewmr4_0509	NC_008321.1	590212	590889	R	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO0510 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR	complement(590212..590889)	Shewanella sp. MR-4	4251755
YP_732647.1	CDS	Shewmr4_0510	NC_008321.1	590905	591372	R	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: son:SO0511 acetyl-CoA carboxylase, biotin carboxyl carrier protein; biotin carboxyl carrier protein	complement(590905..591372)	Shewanella sp. MR-4	4251756
YP_732648.1	CDS	Shewmr4_0511	NC_008321.1	591407	591841	R	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase	complement(591407..591841)	Shewanella sp. MR-4	4251634
YP_732649.1	CDS	Shewmr4_0512	NC_008321.1	591943	592356	R	PFAM: Class I peptide chain release factor; KEGG: son:SO0513 hypothetical protein; peptidyl-tRNA hydrolase domain protein	complement(591943..592356)	Shewanella sp. MR-4	4251635
YP_732650.1	CDS	Shewmr4_0513	NC_008321.1	592505	592870	D	KEGG: son:SO0514 hypothetical protein; hypothetical protein	592505..592870	Shewanella sp. MR-4	4251636
YP_732651.1	CDS	Shewmr4_0514	NC_008321.1	592907	593110	D	KEGG: son:SO0515 hypothetical protein; hypothetical protein	592907..593110	Shewanella sp. MR-4	4251637
YP_732652.1	CDS	Shewmr4_0515	NC_008321.1	593274	593723	D	KEGG: son:SO0516 hypothetical protein; hypothetical protein	593274..593723	Shewanella sp. MR-4	4251638
YP_732653.1	CDS	Shewmr4_0516	NC_008321.1	593938	595308	D	PFAM: outer membrane efflux protein; KEGG: son:SO0518 outer membrane efflux family protein, putative; outer membrane efflux protein	593938..595308	Shewanella sp. MR-4	4251639
YP_732654.1	CDS	Shewmr4_0517	NC_008321.1	595325	596617	D	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SO0519 cation efflux protein, putative; RND family efflux transporter MFP subunit	595325..596617	Shewanella sp. MR-4	4251640
YP_732655.1	CDS	Shewmr4_0518	NC_008321.1	596714	599926	D	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: son:SO0520 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein	596714..599926	Shewanella sp. MR-4	4251641
YP_732656.1	CDS	Shewmr4_0519	NC_008321.1	600056	600142	D	KEGG: son:SO0521 hypothetical protein; hypothetical protein	600056..600142	Shewanella sp. MR-4	4251642
YP_732657.1	CDS	Shewmr4_0520	NC_008321.1	600392	600646	D	KEGG: son:SO0521 hypothetical protein; hypothetical protein	600392..600646	Shewanella sp. MR-4	4251643
YP_732658.1	CDS	mscL	NC_008321.1	600732	601142	R	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel	complement(600732..601142)	Shewanella sp. MR-4	4251644
YP_732659.1	CDS	Shewmr4_0522	NC_008321.1	601326	602279	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0523 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(601326..602279)	Shewanella sp. MR-4	4251645
YP_732660.1	CDS	Shewmr4_0523	NC_008321.1	602377	603432	D	PFAM: secretion protein HlyD family protein; KEGG: son:SO0524 HlyD family secretion protein; secretion protein HlyD family protein	602377..603432	Shewanella sp. MR-4	4251646
YP_732661.1	CDS	Shewmr4_0524	NC_008321.1	603446	605053	D	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0525 drug resistance transporter, EmrB/QacA family protein; EmrB/QacA family drug resistance transporter	603446..605053	Shewanella sp. MR-4	4251647
YP_732662.1	CDS	Shewmr4_0525	NC_008321.1	605449	605922	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0526 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	605449..605922	Shewanella sp. MR-4	4251648
YP_732663.1	CDS	Shewmr4_0526	NC_008321.1	605966	606292	D	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0527 hypothetical protein; antibiotic biosynthesis monooxygenase	605966..606292	Shewanella sp. MR-4	4251649
YP_732664.1	CDS	Shewmr4_0527	NC_008321.1	606618	607982	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: noc:Noc_1911 two component sigma-54 specific, transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator	606618..607982	Shewanella sp. MR-4	4251650
YP_732665.1	CDS	Shewmr4_0528	NC_008321.1	608182	609903	D	KEGG: vpa:VPA0990 hypothetical protein; hypothetical protein	608182..609903	Shewanella sp. MR-4	4250882
YP_732666.1	CDS	Shewmr4_0529	NC_008321.1	609963	611924	R	PFAM: Peptidase M11, gametolysin; KEGG: vpa:VPA0991 hypothetical protein; peptidase M11, gametolysin	complement(609963..611924)	Shewanella sp. MR-4	4250883
YP_732667.1	CDS	Shewmr4_0530	NC_008321.1	612936	613823	D	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: son:SO0528 hypothetical protein; radical SAM domain-containing protein	612936..613823	Shewanella sp. MR-4	4250884
YP_732668.1	CDS	Shewmr4_0531	NC_008321.1	613891	615999	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1156 TonB-dependent receptor; TonB-dependent siderophore receptor	complement(613891..615999)	Shewanella sp. MR-4	4250885
YP_732669.1	CDS	Shewmr4_0532	NC_008321.1	616319	616663	D	PFAM: regulatory protein, ArsR; KEGG: son:SO0532 arsenical resistence operon repressor; ArsR family transcriptional regulator	616319..616663	Shewanella sp. MR-4	4250886
YP_732670.1	CDS	Shewmr4_0533	NC_008321.1	616699	617718	D	PFAM: Bile acid:sodium symporter; KEGG: son:SO0534 arsenical pump membrane protein, putative; bile acid:sodium symporter	616699..617718	Shewanella sp. MR-4	4250887
YP_732671.1	CDS	Shewmr4_0534	NC_008321.1	617760	618755	D	PFAM: permease; KEGG: son:SO0535 hypothetical protein; permease	617760..618755	Shewanella sp. MR-4	4250888
YP_732672.1	CDS	Shewmr4_0535	NC_008321.1	618765	619001	D	KEGG: son:SO0536 redox-active disulfide protein 2; redox-active disulfide protein 2	618765..619001	Shewanella sp. MR-4	4250889
YP_732673.1	CDS	Shewmr4_0536	NC_008321.1	619186	620199	D	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase	619186..620199	Shewanella sp. MR-4	4250890
YP_732674.1	CDS	Shewmr4_0537	NC_008321.1	620209	621471	D	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0539 transporter, putative; major facilitator transporter	620209..621471	Shewanella sp. MR-4	4250891
YP_732675.1	CDS	Shewmr4_0538	NC_008321.1	621476	622345	D	KEGG: son:SO0540 hypothetical protein; hypothetical protein	621476..622345	Shewanella sp. MR-4	4250892
YP_732676.1	CDS	Shewmr4_0539	NC_008321.1	622464	623906	D	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: son:SO0541 metallo-beta-lactamase family protein; RNA-metabolizing metallo-beta-lactamase	622464..623906	Shewanella sp. MR-4	4250893
YP_732677.1	CDS	Shewmr4_0540	NC_008321.1	623951	625306	R	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1704; KEGG: son:SO0542 hypothetical protein; hypothetical protein	complement(623951..625306)	Shewanella sp. MR-4	4250894
YP_732678.1	CDS	Shewmr4_0541	NC_008321.1	625586	626548	D	KEGG: sdn:Sden_0651 hypothetical protein; hypothetical protein	625586..626548	Shewanella sp. MR-4	4250895
YP_732679.1	CDS	Shewmr4_0542	NC_008321.1	626656	626832	R	KEGG: son:SO0543 hypothetical protein; hypothetical protein	complement(626656..626832)	Shewanella sp. MR-4	4250896
YP_732680.1	CDS	Shewmr4_0543	NC_008321.1	627149	629302	D	KEGG: son:SO0544 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase	627149..629302	Shewanella sp. MR-4	4250897
YP_732681.1	CDS	Shewmr4_0544	NC_008321.1	629299	629733	D	PFAM: response regulator receiver; KEGG: son:SO0544.1 hypothetical CheY-homologous receiver domain protein; response regulator receiver protein	629299..629733	Shewanella sp. MR-4	4250898
YP_732682.1	CDS	Shewmr4_0545	NC_008321.1	629743	631461	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: son:SO0545 response regulator; response regulator receiver modulated diguanylate cyclase/phosphodiesterase	629743..631461	Shewanella sp. MR-4	4250899
YP_732683.1	CDS	Shewmr4_0546	NC_008321.1	631628	632533	D	TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO0546 ribosomal protein S6 modification protein; alpha-L-glutamate ligase	631628..632533	Shewanella sp. MR-4	4251774
YP_732684.1	CDS	Shewmr4_0547	NC_008321.1	632577	633269	R	TIGRFAM: conserved hypothetical protein; KEGG: son:SO0547 hypothetical protein; hypothetical protein	complement(632577..633269)	Shewanella sp. MR-4	4251775
YP_732685.1	CDS	Shewmr4_0548	NC_008321.1	633560	633832	R	PFAM: histone family protein DNA-binding protein; KEGG: son:SO0548 DNA-binding protein, HU family; histone family protein DNA-binding protein	complement(633560..633832)	Shewanella sp. MR-4	4251776
YP_732686.1	CDS	Shewmr4_0549	NC_008321.1	633979	634776	R	PFAM: response regulator receiver; KEGG: son:SO0549 chemotaxis protein CheY/response regulator receiver domain protein; response regulator receiver protein	complement(633979..634776)	Shewanella sp. MR-4	4251777
YP_732687.1	CDS	Shewmr4_0550	NC_008321.1	634851	635234	R	KEGG: son:SO0550 hypothetical protein; hypothetical protein	complement(634851..635234)	Shewanella sp. MR-4	4251778
YP_732688.1	CDS	Shewmr4_0551	NC_008321.1	635360	635869	D	KEGG: son:SO0551 hypothetical protein; hypothetical protein	635360..635869	Shewanella sp. MR-4	4251779
YP_732689.1	CDS	Shewmr4_0552	NC_008321.1	635876	636190	R	KEGG: son:SO0552 hypothetical protein; hypothetical protein	complement(635876..636190)	Shewanella sp. MR-4	4251780
YP_732690.1	CDS	Shewmr4_0553	NC_008321.1	636340	636648	R	KEGG: son:SO0553 hypothetical protein; hypothetical protein	complement(636340..636648)	Shewanella sp. MR-4	4251781
YP_732691.1	CDS	Shewmr4_0554	NC_008321.1	636919	637443	D	KEGG: son:SO0554 hypothetical protein; hypothetical protein	636919..637443	Shewanella sp. MR-4	4251782
YP_732692.1	CDS	Shewmr4_0555	NC_008321.1	637466	639217	R	PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: son:SO0555 hypothetical protein; diguanylate cyclase/phosphodiesterase	complement(637466..639217)	Shewanella sp. MR-4	4251783
YP_732693.1	CDS	Shewmr4_0556	NC_008321.1	639356	639664	R	KEGG: son:SO0556 hypothetical protein; hypothetical protein	complement(639356..639664)	Shewanella sp. MR-4	4251784
YP_732694.1	CDS	Shewmr4_0557	NC_008321.1	639713	640609	D	PFAM: GumN family protein; KEGG: son:SO0557 hypothetical protein; GumN family protein	639713..640609	Shewanella sp. MR-4	4251785
YP_732695.1	CDS	Shewmr4_0558	NC_008321.1	640737	641525	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0558 smtA protein; type 11 methyltransferase	complement(640737..641525)	Shewanella sp. MR-4	4251786
YP_732696.1	CDS	Shewmr4_0559	NC_008321.1	641888	642751	D	PFAM: MaoC domain protein dehydratase; KEGG: son:SO0559 MaoC domain protein; dehydratase	641888..642751	Shewanella sp. MR-4	4251787
YP_732697.1	CDS	Shewmr4_0560	NC_008321.1	642806	643696	R	PFAM: aldo/keto reductase; KEGG: vpa:VPA1163 oxidoreductase, aldo/keto reductase 2 family; aldo/keto reductase	complement(642806..643696)	Shewanella sp. MR-4	4251788
YP_732698.1	CDS	Shewmr4_0561	NC_008321.1	643936	645648	D	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase	643936..645648	Shewanella sp. MR-4	4251789
YP_732699.1	CDS	Shewmr4_0562	NC_008321.1	645728	647383	R	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO0560.2 hypothetical small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS	complement(645728..647383)	Shewanella sp. MR-4	4251790
YP_732700.1	CDS	Shewmr4_0563	NC_008321.1	647605	647934	D	KEGG: son:SO0562 hypothetical protein; hypothetical protein	647605..647934	Shewanella sp. MR-4	4251126
YP_732701.1	CDS	Shewmr4_0564	NC_008321.1	648015	648140	R	KEGG: son:SO0563 hypothetical protein; hypothetical protein	complement(648015..648140)	Shewanella sp. MR-4	4251127
YP_732702.1	CDS	Shewmr4_0565	NC_008321.1	648397	648687	D	KEGG: sdn:Sden_0526 hypothetical protein; hypothetical protein	648397..648687	Shewanella sp. MR-4	4251128
YP_732703.1	CDS	Shewmr4_0566	NC_008321.1	648769	649950	D	KEGG: son:SO0564 hypothetical protein; hypothetical protein	648769..649950	Shewanella sp. MR-4	4251129
YP_732704.1	CDS	Shewmr4_0567	NC_008321.1	649934	650842	D	PFAM: periplasmic solute binding protein; KEGG: son:SO0565 adhesion protein, putative; periplasmic solute binding protein	649934..650842	Shewanella sp. MR-4	4251130
YP_732705.1	CDS	Shewmr4_0568	NC_008321.1	650847	651614	D	PFAM: ABC-3 protein; KEGG: son:SO0566 ABC 3 transport family protein; ABC-3 protein	650847..651614	Shewanella sp. MR-4	4251131
YP_732706.1	CDS	Shewmr4_0569	NC_008321.1	651771	652553	D	KEGG: son:SO0567 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase	651771..652553	Shewanella sp. MR-4	4251132
YP_732707.1	CDS	Shewmr4_0570	NC_008321.1	652597	653004	D	PFAM: protein of unknown function DUF1260; KEGG: son:SO0568 hypothetical protein; hypothetical protein	652597..653004	Shewanella sp. MR-4	4251133
YP_732708.1	CDS	Shewmr4_0571	NC_008321.1	653058	654032	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO0569 sensory box/GGDEF family protein; diguanylate cyclase	complement(653058..654032)	Shewanella sp. MR-4	4251134
YP_732709.1	CDS	Shewmr4_0572	NC_008321.1	654051	655046	R	PFAM: response regulator receiver; KEGG: son:SO0570 response regulator; response regulator receiver protein	complement(654051..655046)	Shewanella sp. MR-4	4251135
YP_732710.1	CDS	Shewmr4_0573	NC_008321.1	655625	656431	D	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	655625..656431	Shewanella sp. MR-4	4251136
YP_732711.1	CDS	Shewmr4_0574	NC_008321.1	656496	657509	R	KEGG: son:SO0573 hypothetical protein; hypothetical protein	complement(656496..657509)	Shewanella sp. MR-4	4251137
YP_732712.1	CDS	Shewmr4_0575	NC_008321.1	657747	660653	R	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA	complement(657747..660653)	Shewanella sp. MR-4	4251138
YP_732713.1	CDS	Shewmr4_0576	NC_008321.1	661056	662450	D	PFAM: PhoH family protein; SMART: AAA ATPase; Nucleotide binding protein, PINc; KEGG: son:SO0576 PhoH family protein; PhoH family protein	661056..662450	Shewanella sp. MR-4	4251139
YP_732714.1	CDS	Shewmr4_0577	NC_008321.1	662671	666381	D	KEGG: son:SO0577 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase	662671..666381	Shewanella sp. MR-4	4251140
YP_732715.1	CDS	Shewmr4_0578	NC_008321.1	666465	668867	D	KEGG: son:SO0578 hypothetical protein; hypothetical protein	666465..668867	Shewanella sp. MR-4	4251141
YP_732716.1	CDS	Shewmr4_0579	NC_008321.1	668908	670716	R	PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: son:SO0579 serine/threonine protein kinase, putative; serine/threonine protein kinase	complement(668908..670716)	Shewanella sp. MR-4	4251142
YP_732717.1	CDS	Shewmr4_0580	NC_008321.1	670966	671304	D	KEGG: son:SO0581 hypothetical protein; hypothetical protein	670966..671304	Shewanella sp. MR-4	4251143
YP_732718.1	CDS	Shewmr4_0581	NC_008321.1	671412	672068	D	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase	671412..672068	Shewanella sp. MR-4	4251704
YP_732719.1	CDS	Shewmr4_0582	NC_008321.1	672268	672459	R	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: son:SO0583 bacterioferritin-associated ferredoxin; BFD/(2Fe-2S)-binding domain-containing protein	complement(672268..672459)	Shewanella sp. MR-4	4251705
YP_732720.1	CDS	Shewmr4_0583	NC_008321.1	672707	674281	D	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: son:SO0584 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	672707..674281	Shewanella sp. MR-4	4251706
YP_732721.1	CDS	Shewmr4_0584	NC_008321.1	674366	675301	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	complement(674366..675301)	Shewanella sp. MR-4	4251707
YP_732722.1	CDS	Shewmr4_0585	NC_008321.1	675392	675727	D	KEGG: son:SO0586 hypothetical protein; hypothetical protein	675392..675727	Shewanella sp. MR-4	4251708
YP_732723.1	CDS	Shewmr4_0586	NC_008321.1	675751	676473	R	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: son:SO0587 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase	complement(675751..676473)	Shewanella sp. MR-4	4251709
YP_732724.1	CDS	Shewmr4_0587	NC_008321.1	676489	679692	R	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO0588 transporter, putative; mechanosensitive ion channel protein MscS	complement(676489..679692)	Shewanella sp. MR-4	4251710
YP_732725.1	CDS	Shewmr4_0588	NC_008321.1	679761	680645	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_3514 membrane protein; hypothetical protein	complement(679761..680645)	Shewanella sp. MR-4	4251711
YP_732726.1	CDS	psd	NC_008321.1	680663	681541	R	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase	complement(680663..681541)	Shewanella sp. MR-4	4251712
YP_732727.1	CDS	Shewmr4_0590	NC_008321.1	681625	682689	R	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase	complement(681625..682689)	Shewanella sp. MR-4	4251713
YP_732728.1	CDS	Shewmr4_0591	NC_008321.1	682802	683347	D	3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease	682802..683347	Shewanella sp. MR-4	4251714
YP_732729.1	CDS	Shewmr4_0592	NC_008321.1	684518	684973	D	KEGG: son:SO0595 hypothetical protein; hypothetical protein	684518..684973	Shewanella sp. MR-4	4251715
YP_732730.1	CDS	Shewmr4_0593	NC_008321.1	685218	686717	D	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: son:SO0598 YjeF protein; carbohydrate kinase, YjeF related protein	685218..686717	Shewanella sp. MR-4	4251716
YP_732731.1	CDS	Shewmr4_0594	NC_008321.1	686797	687255	D	PFAM: protein of unknown function UPF0079; KEGG: son:SO0599 conserved hypothetical protein TIGR00150; hypothetical protein	686797..687255	Shewanella sp. MR-4	4251717
YP_732732.1	CDS	Shewmr4_0595	NC_008321.1	687264	688652	D	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: son:SO0600 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase	687264..688652	Shewanella sp. MR-4	4251718
YP_732733.1	CDS	mutL	NC_008321.1	688666	690600	D	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein	688666..690600	Shewanella sp. MR-4	4251719
YP_732734.1	CDS	miaA	NC_008321.1	690629	691519	D	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase	690629..691519	Shewanella sp. MR-4	4251720
YP_732735.1	CDS	Shewmr4_0598	NC_008321.1	691612	691884	D	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: son:SO0603 host factor-I protein; RNA-binding protein Hfq	691612..691884	Shewanella sp. MR-4	4251179
YP_732736.1	CDS	Shewmr4_0599	NC_008321.1	691909	693216	D	PFAM: GTP-binding protein, HSR1-related; KEGG: son:SO0604 GTP-binding protein HflX; GTP-binding protein, HSR1-related	691909..693216	Shewanella sp. MR-4	4251180
YP_732737.1	CDS	Shewmr4_0600	NC_008321.1	693253	694398	D	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: son:SO0605 hflK protein; HflK protein	693253..694398	Shewanella sp. MR-4	4251181
YP_732738.1	CDS	Shewmr4_0601	NC_008321.1	694402	695295	D	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: son:SO0606 hflC protein; HflC protein	694402..695295	Shewanella sp. MR-4	4251182
YP_732739.1	CDS	Shewmr4_0602	NC_008321.1	695666	696256	D	KEGG: son:SO0608 ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit	695666..696256	Shewanella sp. MR-4	4251183
YP_732740.1	CDS	Shewmr4_0603	NC_008321.1	696256	697470	D	PFAM: Cytochrome b/b6, N-terminal domain protein; Cytochrome b/b6, C-terminal domain protein; KEGG: son:SO0609 ubiquinol-cytochrome c reductase, cytochrome b; cytochrome b/b6 domain-containing protein	696256..697470	Shewanella sp. MR-4	4251184
YP_732741.1	CDS	Shewmr4_0604	NC_008321.1	697470	698168	D	PFAM: cytochrome c1; KEGG: son:SO0610 ubiquinol-cytochrome c reductase cytochrome c1 subunit; cytochrome c1	697470..698168	Shewanella sp. MR-4	4251185
YP_732742.1	CDS	sspA	NC_008321.1	698265	698894	D	transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A	698265..698894	Shewanella sp. MR-4	4251186
YP_732743.1	CDS	Shewmr4_0606	NC_008321.1	698894	699331	D	PFAM: Stringent starvation protein B; KEGG: son:SO0612 stringent starvation protein b; ClpXP protease specificity-enhancing factor	698894..699331	Shewanella sp. MR-4	4251187
YP_732744.1	CDS	Shewmr4_0607	NC_008321.1	699488	700099	D	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: son:SO0613 para-aminobenzoate synthase glutamine amidotransferase, component II; aminodeoxychorismate synthase, glutamine amidotransferase subunit	699488..700099	Shewanella sp. MR-4	4251188
YP_732745.1	CDS	Shewmr4_0608	NC_008321.1	700330	702810	D	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: son:SO0614 dipeptidyl peptidase IV, putative; peptidase S9 prolyl oligopeptidase	700330..702810	Shewanella sp. MR-4	4251189
YP_732746.1	CDS	Shewmr4_0609	NC_008321.1	703010	704155	D	KEGG: son:SO0615 hypothetical protein; putative signal transduction protein	703010..704155	Shewanella sp. MR-4	4251190
YP_732747.1	CDS	Shewmr4_0610	NC_008321.1	704211	705122	D	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: son:SO0616 esterase, putative; alpha/beta hydrolase domain-containing protein	704211..705122	Shewanella sp. MR-4	4251191
YP_732748.1	CDS	argD	NC_008321.1	705431	706648	D	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein	705431..706648	Shewanella sp. MR-4	4251192
YP_732749.1	CDS	Shewmr4_0612	NC_008321.1	706776	707795	D	PFAM: arginine N-succinyltransferase beta subunit; KEGG: son:SO0618 arginine N-succinyltransferase; arginine succinyltransferase	706776..707795	Shewanella sp. MR-4	4251193
YP_732750.1	CDS	astD	NC_008321.1	707805	709268	D	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase	707805..709268	Shewanella sp. MR-4	4251194
YP_732751.1	CDS	Shewmr4_0614	NC_008321.1	709433	710236	D	KEGG: son:SO0620 hypothetical protein; hypothetical protein	709433..710236	Shewanella sp. MR-4	4251195
YP_732752.1	CDS	Shewmr4_0615	NC_008321.1	710367	711695	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO0621 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(710367..711695)	Shewanella sp. MR-4	4251196
YP_732753.1	CDS	Shewmr4_0616	NC_008321.1	711692	712366	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO0622 DNA-binding response regulator; two component transcriptional regulator	complement(711692..712366)	Shewanella sp. MR-4	4251513
YP_732754.1	CDS	Shewmr4_0617	NC_008321.1	712347	712694	R	KEGG: son:SO0623 hypothetical protein; hypothetical protein	complement(712347..712694)	Shewanella sp. MR-4	4251514
YP_732755.1	CDS	Shewmr4_0618	NC_008321.1	712777	713412	R	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein	complement(712777..713412)	Shewanella sp. MR-4	4251515
YP_732756.1	CDS	Shewmr4_0619	NC_008321.1	713835	714614	D	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO0625 hypothetical protein; Sel1 domain-containing protein	713835..714614	Shewanella sp. MR-4	4251516
YP_732757.1	CDS	Shewmr4_0620	NC_008321.1	714734	715306	R	TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: son:SO0627 putative 2'-5' RNA ligase; 2'-5' RNA ligase	complement(714734..715306)	Shewanella sp. MR-4	4251517
YP_732758.1	CDS	Shewmr4_0621	NC_008321.1	715476	717662	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO0628 GGDEF domain protein; diguanylate cyclase/phosphodiesterase	715476..717662	Shewanella sp. MR-4	4251518
YP_732759.1	CDS	Shewmr4_0622	NC_008321.1	717869	719875	D	TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0630 TonB-dependent receptor; TonB-dependent copper receptor	717869..719875	Shewanella sp. MR-4	4251519
YP_732760.1	CDS	Shewmr4_0623	NC_008321.1	720045	722552	D	TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; KEGG: son:SO0632 ATP-dependent helicase HrpB; ATP-dependent helicase HrpB	720045..722552	Shewanella sp. MR-4	4251520
YP_732761.1	CDS	Shewmr4_0624	NC_008321.1	722630	724924	D	KEGG: son:SO0633 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1B	722630..724924	Shewanella sp. MR-4	4251521
YP_732762.1	CDS	Shewmr4_0625	NC_008321.1	725002	725280	D	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO0635 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase	725002..725280	Shewanella sp. MR-4	4251522
YP_732763.1	CDS	Shewmr4_0626	NC_008321.1	725452	725889	D	hypothetical protein	725452..725889	Shewanella sp. MR-4	4251523
YP_732764.1	CDS	Shewmr4_0627	NC_008321.1	726233	726640	D	PFAM: OsmC family protein; KEGG: vpa:VP1807 hypothetical protein; OsmC family protein	726233..726640	Shewanella sp. MR-4	4251524
YP_732765.1	CDS	Shewmr4_0628	NC_008321.1	726857	727267	D	KEGG: vpa:VPA0336 hypothetical protein; hypothetical protein	726857..727267	Shewanella sp. MR-4	4251525
YP_732766.1	CDS	Shewmr4_0629	NC_008321.1	727386	727616	D	KEGG: son:SO4012 hypothetical protein; hypothetical protein	727386..727616	Shewanella sp. MR-4	4251526
YP_732767.1	CDS	Shewmr4_0630	NC_008321.1	727685	729868	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pha:PSHAa2478 putative TonB-dependent receptor protein; TonB-dependent receptor	complement(727685..729868)	Shewanella sp. MR-4	4251527
YP_732768.1	CDS	Shewmr4_0631	NC_008321.1	730125	730826	D	KEGG: son:SO4011 hypothetical protein; hypothetical protein	730125..730826	Shewanella sp. MR-4	4251528
YP_732769.1	CDS	Shewmr4_0632	NC_008321.1	730982	732280	R	KEGG: hch:HCH_03096 FOG: PAS/PAC domain; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	complement(730982..732280)	Shewanella sp. MR-4	4251529
YP_732770.1	CDS	Shewmr4_0633	NC_008321.1	732536	735643	R	PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: ppr:PBPRB0003 putative tetrathionate reductase, subunit A; molydopterin dinucleotide-binding region	complement(732536..735643)	Shewanella sp. MR-4	4251651
YP_732771.1	CDS	Shewmr4_0634	NC_008321.1	735706	736800	R	PFAM: Polysulphide reductase, NrfD; KEGG: eba:ebA3056 subunit C of a molybdoprotein, similar to that of tetrathionate reductase or polysulphide reductase; polysulfide reductase, NrfD	complement(735706..736800)	Shewanella sp. MR-4	4251652
YP_732772.1	CDS	Shewmr4_0635	NC_008321.1	736790	737545	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: bpa:BPP1030 tetrathionate reductase subunit B; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	complement(736790..737545)	Shewanella sp. MR-4	4251653
YP_732773.1	CDS	Shewmr4_0636	NC_008321.1	737763	739811	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: ppr:PBPRB0007 hypothetical histidine kinase; periplasmic sensor signal transduction histidine kinase	737763..739811	Shewanella sp. MR-4	4251654
YP_732774.1	CDS	Shewmr4_0637	NC_008321.1	739808	740419	D	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: vfi:VFA0103 two component response regulator; two component LuxR family transcriptional regulator	739808..740419	Shewanella sp. MR-4	4251655
YP_732775.1	CDS	Shewmr4_0638	NC_008321.1	740646	744317	D	KEGG: son:SO4008 hypothetical protein; hypothetical protein	740646..744317	Shewanella sp. MR-4	4251656
YP_732776.1	CDS	Shewmr4_0639	NC_008321.1	744317	744982	D	KEGG: son:SO4007 hypothetical protein; hypothetical protein	744317..744982	Shewanella sp. MR-4	4251657
YP_732777.1	CDS	Shewmr4_0640	NC_008321.1	745025	746245	D	KEGG: son:SO4006 hypothetical protein; hypothetical protein	745025..746245	Shewanella sp. MR-4	4251658
YP_732778.1	CDS	Shewmr4_0641	NC_008321.1	746233	747141	D	KEGG: son:SO4005 hypothetical protein; hypothetical protein	746233..747141	Shewanella sp. MR-4	4251659
YP_732779.1	CDS	Shewmr4_0642	NC_008321.1	747496	748746	D	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO4004 proton/glutamate symporter, putative; sodium:dicarboxylate symporter	747496..748746	Shewanella sp. MR-4	4251660
YP_732780.1	CDS	Shewmr4_0643	NC_008321.1	748782	749585	R	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	complement(748782..749585)	Shewanella sp. MR-4	4251661
YP_732781.1	CDS	Shewmr4_0644	NC_008321.1	749615	750010	R	KEGG: dde:Dde_2987 transposase; transposase	complement(749615..750010)	Shewanella sp. MR-4	4251662
YP_732782.1	CDS	Shewmr4_0645	NC_008321.1	750111	750581	R	hypothetical protein	complement(750111..750581)	Shewanella sp. MR-4	4251663
YP_732783.1	CDS	Shewmr4_0646	NC_008321.1	750990	751478	R	PFAM: Uncharacterized protein UPF0114; KEGG: son:SO3997 hypothetical protein; hypothetical protein	complement(750990..751478)	Shewanella sp. MR-4	4251664
YP_732784.1	CDS	Shewmr4_0647	NC_008321.1	752186	752959	R	hypothetical protein	complement(752186..752959)	Shewanella sp. MR-4	4251665
YP_732785.1	CDS	Shewmr4_0648	NC_008321.1	753102	754091	R	PFAM: NERD domain protein; KEGG: pha:PSHAb0100 putative orphan protein; NERD domain-containing protein	complement(753102..754091)	Shewanella sp. MR-4	4251666
YP_732786.1	CDS	Shewmr4_0649	NC_008321.1	754798	755790	R	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase	complement(754798..755790)	Shewanella sp. MR-4	4251667
YP_732787.1	CDS	Shewmr4_0650	NC_008321.1	756086	758377	D	PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: son:SO3990 dipeptidyl peptidase IV; dipeptidyl-peptidase IV	756086..758377	Shewanella sp. MR-4	4251668
YP_732788.1	CDS	Shewmr4_0651	NC_008321.1	758731	759447	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO3988 aerobic respiration control protein ArcA; two-component response regulator	complement(758731..759447)	Shewanella sp. MR-4	4251582
YP_732789.1	CDS	Shewmr4_0652	NC_008321.1	760034	760468	D	KEGG: son:SO3987 hypothetical protein; hypothetical protein	760034..760468	Shewanella sp. MR-4	4251583
YP_732790.1	CDS	Shewmr4_0653	NC_008321.1	761028	762383	D	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III	761028..762383	Shewanella sp. MR-4	4251584
YP_732791.1	CDS	Shewmr4_0654	NC_008321.1	762385	763500	D	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO3985 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase	762385..763500	Shewanella sp. MR-4	4251585
YP_732792.1	CDS	Shewmr4_0655	NC_008321.1	763555	764532	R	PFAM: Mg2 transporter protein, CorA family protein; KEGG: son:SO3984 magnesium transporter, putative; Mg2 transporter protein, CorA family protein	complement(763555..764532)	Shewanella sp. MR-4	4251586
YP_732793.1	CDS	Shewmr4_0656	NC_008321.1	764701	765075	D	PFAM: Uncharacterized conserved protein UCP006287; KEGG: son:SO3983 hypothetical protein; hypothetical protein	764701..765075	Shewanella sp. MR-4	4251587
YP_732794.1	CDS	Shewmr4_0657	NC_008321.1	765165	765794	R	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: son:SO3982 DNA-binding nitrate/nitrite response regulator; two component LuxR family transcriptional regulator	complement(765165..765794)	Shewanella sp. MR-4	4251588
YP_732795.1	CDS	Shewmr4_0658	NC_008321.1	765787	767583	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: son:SO3981 nitrate/nitrite sensor protein NarQ; nitrate/nitrite sensor protein NarQ	complement(765787..767583)	Shewanella sp. MR-4	4251589
YP_732796.1	CDS	nrfA	NC_008321.1	767809	769230	D	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552	767809..769230	Shewanella sp. MR-4	4251590
YP_732797.1	CDS	Shewmr4_0660	NC_008321.1	769381	771315	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: vvy:VVA0651 GGDEF family protein; diguanylate cyclase/phosphodiesterase with GAF sensor	complement(769381..771315)	Shewanella sp. MR-4	4251591
YP_732798.1	CDS	Shewmr4_0661	NC_008321.1	771521	772291	D	KEGG: son:SO3975 hypothetical protein; hypothetical protein	771521..772291	Shewanella sp. MR-4	4251592
YP_732799.1	CDS	Shewmr4_0662	NC_008321.1	772344	772892	R	KEGG: son:SO3974 hypothetical protein; hypothetical protein	complement(772344..772892)	Shewanella sp. MR-4	4251593
YP_732800.1	CDS	Shewmr4_0663	NC_008321.1	773093	773434	D	hypothetical protein	773093..773434	Shewanella sp. MR-4	4251594
YP_732801.1	CDS	Shewmr4_0664	NC_008321.1	773705	774562	D	PFAM: protein of unknown function RIO1; KEGG: son:SO3973 RIO1/ZK632.3/MJ0444 family, putative; hypothetical protein	773705..774562	Shewanella sp. MR-4	4251595
YP_732802.1	CDS	Shewmr4_0665	NC_008321.1	775291	775524	R	PFAM: transposase IS3/IS911 family protein; KEGG: son:SO3972 hypothetical transposase; transposase IS3/IS911 family protein	complement(775291..775524)	Shewanella sp. MR-4	4251596
YP_732803.1	CDS	Shewmr4_0666	NC_008321.1	776180	776872	D	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: son:SO3969 OmpA family protein; OmpA/MotB domain-containing protein	776180..776872	Shewanella sp. MR-4	4251597
YP_732804.1	CDS	Shewmr4_0667	NC_008321.1	777112	777939	D	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: son:SO3967 hypothetical protein; molybdate ABC transporter periplasmic molybdate-binding protein	777112..777939	Shewanella sp. MR-4	4251598
YP_732805.1	CDS	Shewmr4_0668	NC_008321.1	778276	779640	R	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: son:SO3966 magnesium transporter; magnesium transporter	complement(778276..779640)	Shewanella sp. MR-4	4251879
YP_732806.1	CDS	Shewmr4_0669	NC_008321.1	779852	780127	R	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: son:SO3965 phosphocarrier protein NPR; HPr family phosphocarrier protein	complement(779852..780127)	Shewanella sp. MR-4	4251880
YP_732807.1	CDS	Shewmr4_0670	NC_008321.1	780114	780968	R	PFAM: Uncharacterized P-loop ATPase protein UPF0042; KEGG: son:SO3964 hypothetical protein; hypothetical protein	complement(780114..780968)	Shewanella sp. MR-4	4251881
YP_732808.1	CDS	Shewmr4_0671	NC_008321.1	780965	781408	R	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: son:SO3963 nitrogen regulatory IIA protein; PTS IIA-like nitrogen-regulatory protein PtsN	complement(780965..781408)	Shewanella sp. MR-4	4251882
YP_732809.1	CDS	Shewmr4_0672	NC_008321.1	781411	781698	R	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3962 ribosomal subunit interface protein; sigma 54 modulation protein / SSU ribosomal protein S30P	complement(781411..781698)	Shewanella sp. MR-4	4251883
YP_732810.1	CDS	Shewmr4_0673	NC_008321.1	781727	783202	R	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54	complement(781727..783202)	Shewanella sp. MR-4	4251884
YP_732811.1	CDS	Shewmr4_0674	NC_008321.1	783309	784040	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3960 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(783309..784040)	Shewanella sp. MR-4	4251885
YP_732812.1	CDS	Shewmr4_0675	NC_008321.1	784037	784588	R	PFAM: OstA family protein; KEGG: son:SO3959 hypothetical protein; OstA family protein	complement(784037..784588)	Shewanella sp. MR-4	4251886
YP_732813.1	CDS	Shewmr4_0676	NC_008321.1	784575	785135	R	PFAM: protein of unknown function DUF1239; KEGG: son:SO3958 hypothetical protein; hypothetical protein	complement(784575..785135)	Shewanella sp. MR-4	4251887
YP_732814.1	CDS	Shewmr4_0677	NC_008321.1	785132	785683	R	forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	complement(785132..785683)	Shewanella sp. MR-4	4251888
YP_732815.1	CDS	Shewmr4_0678	NC_008321.1	785683	786660	R	KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein	complement(785683..786660)	Shewanella sp. MR-4	4251889
YP_732816.1	CDS	Shewmr4_0679	NC_008321.1	787221	788039	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3954 ABC transporter, ATP-binding protein, putative; ABC transporter-like protein	787221..788039	Shewanella sp. MR-4	4251890
YP_732817.1	CDS	Shewmr4_0680	NC_008321.1	788036	788821	D	PFAM: protein of unknown function DUF140; KEGG: son:SO3953 putative membrane protein; hypothetical protein	788036..788821	Shewanella sp. MR-4	4251891
YP_732818.1	CDS	Shewmr4_0681	NC_008321.1	788876	789349	D	PFAM: Mammalian cell entry related domain protein; KEGG: son:SO3952 mce-related protein; hypothetical protein	788876..789349	Shewanella sp. MR-4	4251892
YP_732819.1	CDS	Shewmr4_0682	NC_008321.1	789361	790014	D	PFAM: toluene tolerance family protein; KEGG: son:SO3951 hypothetical protein; toluene tolerance family protein	789361..790014	Shewanella sp. MR-4	4251893
YP_732820.1	CDS	Shewmr4_0683	NC_008321.1	790020	790304	D	KEGG: son:SO3950 SpoIIAA family protein; SpoIIAA family protein	790020..790304	Shewanella sp. MR-4	4251894
YP_732821.1	CDS	Shewmr4_0684	NC_008321.1	790321	790572	D	PFAM: BolA family protein; KEGG: son:SO3949 BolA/YrbA family protein; BolA family protein	790321..790572	Shewanella sp. MR-4	4251895
YP_732822.1	CDS	Shewmr4_0685	NC_008321.1	790585	791844	D	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase	790585..791844	Shewanella sp. MR-4	4251896
YP_732823.1	CDS	Shewmr4_0686	NC_008321.1	793478	793810	R	PFAM: protein of unknown function DUF469; KEGG: vvu:VV20828 hypothetical protein; hypothetical protein	complement(793478..793810)	Shewanella sp. MR-4	4251530
YP_732824.1	CDS	Shewmr4_0687	NC_008321.1	794156	795217	R	PFAM: methyltransferase small; Methyltransferase small, N-terminal domain protein; KEGG: son:SO0828 ribosomal RNA small subunit methyltransferase C; 16S rRNA m(2)G 1207 methyltransferase	complement(794156..795217)	Shewanella sp. MR-4	4251531
YP_732825.1	CDS	Shewmr4_0688	NC_008321.1	795372	796784	R	PFAM: Alkaline phosphatase; KEGG: son:SO0830 alkaline phosphatase; alkaline phosphatase	complement(795372..796784)	Shewanella sp. MR-4	4251532
YP_732826.1	CDS	Shewmr4_0689	NC_008321.1	796858	797805	R	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase	complement(796858..797805)	Shewanella sp. MR-4	4251533
YP_732827.1	CDS	Shewmr4_0690	NC_008321.1	797914	798645	R	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE	complement(797914..798645)	Shewanella sp. MR-4	4251534
YP_732828.1	CDS	Shewmr4_0691	NC_008321.1	798654	799427	R	PFAM: Endonuclease I; KEGG: son:SO0833 endonuclease I; deoxyribonuclease I	complement(798654..799427)	Shewanella sp. MR-4	4251535
YP_732829.1	CDS	Shewmr4_0692	NC_008321.1	799557	800162	R	PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; KEGG: son:SO0834 sprT protein, putative; hypothetical protein	complement(799557..800162)	Shewanella sp. MR-4	4251536
YP_732830.1	CDS	Shewmr4_0693	NC_008321.1	800343	801500	R	KEGG: son:SO0835 hypothetical protein; hypothetical protein	complement(800343..801500)	Shewanella sp. MR-4	4251537
YP_732831.1	CDS	Shewmr4_0694	NC_008321.1	801850	802647	D	PFAM: penicillin-binding protein, transpeptidase; KEGG: son:SO0837 beta-lactamase, putative; Beta-lactamase	801850..802647	Shewanella sp. MR-4	4251538
YP_732832.1	CDS	Shewmr4_0695	NC_008321.1	802954	803865	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0839 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(802954..803865)	Shewanella sp. MR-4	4251539
YP_732833.1	CDS	Shewmr4_0696	NC_008321.1	803988	808541	D	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase; carbamoyl-phosphate synthase L chain, ATP-binding	803988..808541	Shewanella sp. MR-4	4251540
YP_732834.1	CDS	Shewmr4_0697	NC_008321.1	808736	810184	D	KEGG: son:SO0841 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3; diguanylate cyclase	808736..810184	Shewanella sp. MR-4	4251541
YP_732835.1	CDS	Shewmr4_0698	NC_008321.1	810634	812727	D	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G	810634..812727	Shewanella sp. MR-4	4251542
YP_732836.1	CDS	Shewmr4_0699	NC_008321.1	812856	813743	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0843 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(812856..813743)	Shewanella sp. MR-4	4251543
YP_732837.1	CDS	Shewmr4_0700	NC_008321.1	813838	813990	D	KEGG: son:SO0844 hypothetical protein; hypothetical protein	813838..813990	Shewanella sp. MR-4	4251544
YP_732838.1	CDS	Shewmr4_0701	NC_008321.1	814216	814647	R	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: son:SO0845 cytochrome c-type protein NapB; periplasmic nitrate reductase subunit NapB	complement(814216..814647)	Shewanella sp. MR-4	4251545
YP_732839.1	CDS	napH	NC_008321.1	814644	815642	R	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component	complement(814644..815642)	Shewanella sp. MR-4	4251546
YP_732840.1	CDS	napG	NC_008321.1	815639	816373	R	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component	complement(815639..816373)	Shewanella sp. MR-4	4251144
YP_732841.1	CDS	Shewmr4_0704	NC_008321.1	816425	818905	R	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit	complement(816425..818905)	Shewanella sp. MR-4	4251145
YP_732842.1	CDS	Shewmr4_0705	NC_008321.1	818902	819186	R	PFAM: NapD family protein; KEGG: son:SO0849 napD protein; NapD family protein	complement(818902..819186)	Shewanella sp. MR-4	4251146
YP_732843.1	CDS	Shewmr4_0706	NC_008321.1	819427	821052	R	KEGG: son:SO0850 hypothetical protein; hypothetical protein	complement(819427..821052)	Shewanella sp. MR-4	4251147
YP_732844.1	CDS	Shewmr4_0707	NC_008321.1	821068	821610	R	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: son:SO0851 hypothetical protein; prepilin-type cleavage/methylation-like protein	complement(821068..821610)	Shewanella sp. MR-4	4251148
YP_732845.1	CDS	Shewmr4_0708	NC_008321.1	821613	822011	R	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: son:SO0852 type IV pilus assembly protein PilV; prepilin-type cleavage/methylation-like protein	complement(821613..822011)	Shewanella sp. MR-4	4251149
YP_732846.1	CDS	Shewmr4_0709	NC_008321.1	822011	822445	R	PFAM: methylation site containing protein; KEGG: son:SO0853 pilin, putative; methylation site containing protein	complement(822011..822445)	Shewanella sp. MR-4	4251150
YP_732847.1	CDS	Shewmr4_0710	NC_008321.1	822447	822818	R	PFAM: methylation site containing protein; KEGG: son:SO0854 type IV pilin, putative; methylation site containing protein	complement(822447..822818)	Shewanella sp. MR-4	4251151
YP_732848.1	CDS	Shewmr4_0711	NC_008321.1	823035	824285	R	KEGG: son:SO0855 hypothetical protein; hypothetical protein	complement(823035..824285)	Shewanella sp. MR-4	4251152
YP_732849.1	CDS	Shewmr4_0712	NC_008321.1	824282	826951	R	PFAM: protein of unknown function DUF214; KEGG: son:SO0856 putative ABC transport system permease protein; hypothetical protein	complement(824282..826951)	Shewanella sp. MR-4	4251153
YP_732850.1	CDS	Shewmr4_0713	NC_008321.1	826956	827627	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0857 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(826956..827627)	Shewanella sp. MR-4	4251154
YP_732851.1	CDS	Shewmr4_0714	NC_008321.1	828281	829639	D	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO0858 sodium:alanine symporter family protein; amino acid carrier protein	828281..829639	Shewanella sp. MR-4	4251155
YP_732852.1	CDS	Shewmr4_0715	NC_008321.1	829768	835071	D	KEGG: son:SO0859 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase	829768..835071	Shewanella sp. MR-4	4251156
YP_732853.1	CDS	Shewmr4_0716	NC_008321.1	835137	836153	D	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO0860 response regulator; response regulator receiver modulated metal dependent phosphohydrolase	835137..836153	Shewanella sp. MR-4	4251157
YP_732854.1	CDS	Shewmr4_0717	NC_008321.1	836217	837173	R	PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: son:SO0861 hypothetical protein; glycine cleavage T protein (aminomethyl transferase)	complement(836217..837173)	Shewanella sp. MR-4	4251158
YP_732855.1	CDS	Shewmr4_0718	NC_008321.1	837311	838540	R	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase	complement(837311..838540)	Shewanella sp. MR-4	4251159
YP_732856.1	CDS	Shewmr4_0719	NC_008321.1	838696	839304	D	KEGG: son:SO0863 hypothetical protein; hypothetical protein	838696..839304	Shewanella sp. MR-4	4251160
YP_732857.1	CDS	Shewmr4_0720	NC_008321.1	839672	840337	D	PFAM: regulatory protein, LuxR; KEGG: son:SO0864 transcriptional regulator, LuxR family; LuxR family transcriptional regulator	839672..840337	Shewanella sp. MR-4	4251161
YP_732858.1	CDS	Shewmr4_0721	NC_008321.1	840521	842029	R	PFAM: Curlin associated repeat protein; KEGG: son:SO0865 hypothetical protein; curlin-associated protein	complement(840521..842029)	Shewanella sp. MR-4	4251757
YP_732859.1	CDS	Shewmr4_0722	NC_008321.1	842044	842463	R	PFAM: Curlin associated repeat protein; KEGG: son:SO0866 minor curlin subunit CsgB, putative; curlin-associated protein	complement(842044..842463)	Shewanella sp. MR-4	4251758
YP_732860.1	CDS	Shewmr4_0723	NC_008321.1	842865	845372	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; PKD domain containing protein; Proprotein convertase, P; KEGG: son:SO0867 serine protease, subtilase family; peptidase S8/S53 subtilisin kexin sedolisin	842865..845372	Shewanella sp. MR-4	4251759
YP_732861.1	CDS	Shewmr4_0724	NC_008321.1	845434	845955	R	KEGG: son:SO0868 hypothetical protein; hypothetical protein	complement(845434..845955)	Shewanella sp. MR-4	4251760
YP_732862.1	CDS	panC	NC_008321.1	846245	847090	R	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase	complement(846245..847090)	Shewanella sp. MR-4	4251761
YP_732863.1	CDS	panB	NC_008321.1	847142	847936	R	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase	complement(847142..847936)	Shewanella sp. MR-4	4251762
YP_732864.1	CDS	Shewmr4_0727	NC_008321.1	847993	848481	R	KEGG: son:SO0871 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	complement(847993..848481)	Shewanella sp. MR-4	4251763
YP_732865.1	CDS	Shewmr4_0728	NC_008321.1	848481	849788	R	TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: son:SO0872 tRNA nucleotidyltransferase (CCA-adding enzyme); poly(A) polymerase	complement(848481..849788)	Shewanella sp. MR-4	4251764
YP_732866.1	CDS	Shewmr4_0729	NC_008321.1	850071	850970	R	PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: son:SO0873 glutamyl-tRNA synthetase domain protein; glutamyl-tRNA synthetase, class Ic	complement(850071..850970)	Shewanella sp. MR-4	4251765
YP_732867.1	CDS	Shewmr4_0730	NC_008321.1	851106	851549	R	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: son:SO0874 DnaK suppressor protein; TraR/DksA family transcriptional regulator	complement(851106..851549)	Shewanella sp. MR-4	4251766
YP_732868.1	CDS	Shewmr4_0731	NC_008321.1	851713	852417	R	Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A	complement(851713..852417)	Shewanella sp. MR-4	4251767
YP_732869.1	CDS	Shewmr4_0732	NC_008321.1	852649	853941	D	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B	852649..853941	Shewanella sp. MR-4	4251768
YP_732870.1	CDS	Shewmr4_0733	NC_008321.1	854120	854629	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0877 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	854120..854629	Shewanella sp. MR-4	4251769
YP_732871.1	CDS	Shewmr4_0734	NC_008321.1	855168	856055	R	PFAM: phosphoribulokinase/uridine kinase; KEGG: son:SO0878 phosphoribulokinase; phosphoribulokinase	complement(855168..856055)	Shewanella sp. MR-4	4251770
YP_732872.1	CDS	Shewmr4_0735	NC_008321.1	856144	856389	R	PFAM: protein of unknown function UPF0270; KEGG: son:SO0879 hypothetical protein; hypothetical protein	complement(856144..856389)	Shewanella sp. MR-4	4251771
YP_732873.1	CDS	Shewmr4_0736	NC_008321.1	856399	857382	R	PFAM: alpha/beta hydrolase fold; KEGG: son:SO0880 hypothetical protein; alpha/beta hydrolase fold domain-containing protein	complement(856399..857382)	Shewanella sp. MR-4	4251772
YP_732874.1	CDS	Shewmr4_0737	NC_008321.1	857494	858000	D	KEGG: son:SO0881 hypothetical protein; hypothetical protein	857494..858000	Shewanella sp. MR-4	4251773
YP_732875.1	CDS	Shewmr4_0738	NC_008321.1	858047	859648	D	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: son:SO0882 oxidoreductase, GMC family; glucose-methanol-choline oxidoreductase	858047..859648	Shewanella sp. MR-4	4251424
YP_732876.1	CDS	Shewmr4_0739	NC_008321.1	859661	860071	D	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: son:SO0883 hypothetical protein; glutathione-dependent formaldehyde-activating, GFA	859661..860071	Shewanella sp. MR-4	4251425
YP_732877.1	CDS	Shewmr4_0740	NC_008321.1	860088	860549	R	TIGRFAM: conserved hypothetical protein; KEGG: son:SO0884 hypothetical protein; hypothetical protein	complement(860088..860549)	Shewanella sp. MR-4	4251426
YP_732878.1	CDS	Shewmr4_0741	NC_008321.1	860585	862498	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0885 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(860585..862498)	Shewanella sp. MR-4	4251427
YP_732879.1	CDS	Shewmr4_0742	NC_008321.1	862890	863090	D	TIGRFAM: conserved hypothetical protein; KEGG: son:SO0886 hypothetical protein; hypothetical protein	862890..863090	Shewanella sp. MR-4	4251428
YP_732880.1	CDS	Shewmr4_0743	NC_008321.1	863497	865026	D	KEGG: vvu:VV21314 chromosome segregation ATPase; chromosome segregation ATPase	863497..865026	Shewanella sp. MR-4	4251429
YP_732881.1	CDS	Shewmr4_0744	NC_008321.1	865609	866466	D	PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: son:SO0895 pirin family protein; pirin domain-containing protein	865609..866466	Shewanella sp. MR-4	4251430
YP_732882.1	CDS	Shewmr4_0745	NC_008321.1	866983	868359	D	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA	866983..868359	Shewanella sp. MR-4	4251431
YP_732883.1	CDS	Shewmr4_0746	NC_008321.1	868527	868949	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO0899 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	complement(868527..868949)	Shewanella sp. MR-4	4251432
YP_732884.1	CDS	Shewmr4_0747	NC_008321.1	869072	870112	R	PFAM: aldo/keto reductase; KEGG: son:SO0900 oxidoreductase, aldo/keto reductase family; aldo/keto reductase	complement(869072..870112)	Shewanella sp. MR-4	4251433
YP_732885.1	CDS	Shewmr4_0748	NC_008321.1	870578	871948	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A	870578..871948	Shewanella sp. MR-4	4251434
YP_732886.1	CDS	Shewmr4_0749	NC_008321.1	871948	873180	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B	871948..873180	Shewanella sp. MR-4	4251435
YP_732887.1	CDS	Shewmr4_0750	NC_008321.1	873170	873964	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C	873170..873964	Shewanella sp. MR-4	4251436
YP_732888.1	CDS	Shewmr4_0751	NC_008321.1	873961	874581	D	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D	873961..874581	Shewanella sp. MR-4	4251437
YP_732889.1	CDS	Shewmr4_0752	NC_008321.1	874591	875199	D	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E	874591..875199	Shewanella sp. MR-4	4251438
YP_732890.1	CDS	Shewmr4_0753	NC_008321.1	875251	876468	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F	875251..876468	Shewanella sp. MR-4	4251439
YP_732891.1	CDS	Shewmr4_0754	NC_008321.1	877031	878044	R	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3360 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein	complement(877031..878044)	Shewanella sp. MR-4	4251440
YP_732892.1	CDS	Shewmr4_0755	NC_008321.1	878445	878762	D	hypothetical protein	878445..878762	Shewanella sp. MR-4	4251441
YP_732893.1	CDS	Shewmr4_0756	NC_008321.1	878882	880066	D	PFAM: beta-lactamase; KEGG: son:SO0914 hypothetical protein; beta-lactamase	878882..880066	Shewanella sp. MR-4	4251267
YP_732894.1	CDS	Shewmr4_0757	NC_008321.1	880203	882653	R	PFAM: Ankyrin; KEGG: son:SO0915 ankyrin domain protein; ankyrin	complement(880203..882653)	Shewanella sp. MR-4	4251268
YP_732895.1	CDS	Shewmr4_0758	NC_008321.1	882893	883915	R	PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: son:SO0916 putative acetyltransferase; MarR family transcriptional regulator	complement(882893..883915)	Shewanella sp. MR-4	4251269
YP_732896.1	CDS	Shewmr4_0759	NC_008321.1	883981	884520	R	pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase	complement(883981..884520)	Shewanella sp. MR-4	4251270
YP_732897.1	CDS	Shewmr4_0760	NC_008321.1	884777	887344	D	PFAM: peptidase S45, penicillin amidase; KEGG: son:SO0918 aculeacin A acylase; peptidase S45, penicillin amidase	884777..887344	Shewanella sp. MR-4	4251271
YP_732898.1	CDS	Shewmr4_0761	NC_008321.1	887781	889073	D	PFAM: Amino acid transporter, transmembrane; KEGG: son:SO0919 serine transporter, putative; amino acid transporter, transmembrane	887781..889073	Shewanella sp. MR-4	4251272
YP_732899.1	CDS	Shewmr4_0762	NC_008321.1	889131	889574	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0920 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(889131..889574)	Shewanella sp. MR-4	4251273
YP_732900.1	CDS	Shewmr4_0763	NC_008321.1	889794	890090	D	KEGG: son:SO0921 hypothetical protein; hypothetical protein	889794..890090	Shewanella sp. MR-4	4251274
YP_732901.1	CDS	Shewmr4_0764	NC_008321.1	890252	891559	D	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO0922 proton/glutamate symporter; sodium:dicarboxylate symporter	890252..891559	Shewanella sp. MR-4	4251275
YP_732902.1	CDS	Shewmr4_0765	NC_008321.1	891615	892031	R	PFAM: protein of unknown function DUF306, Meta and HslJ; KEGG: son:SO0923 hypothetical protein; hypothetical protein	complement(891615..892031)	Shewanella sp. MR-4	4251276
YP_732903.1	CDS	Shewmr4_0766	NC_008321.1	892102	892335	D	KEGG: son:SO0924 hypothetical protein; hypothetical protein	892102..892335	Shewanella sp. MR-4	4251277
YP_732904.1	CDS	Shewmr4_0767	NC_008321.1	892349	893362	R	KEGG: son:SO0925 GGDEF domain protein; GGDEF domain-containing protein	complement(892349..893362)	Shewanella sp. MR-4	4251278
YP_732905.1	CDS	Shewmr4_0768	NC_008321.1	893536	894078	D	KEGG: son:SO0926 acetyltransferase, GNAT family; acetyltransferase	893536..894078	Shewanella sp. MR-4	4251279
YP_732906.1	CDS	Shewmr4_0769	NC_008321.1	894202	896217	D	PFAM: EAL domain protein; phosphotransferase system, EIIC; KEGG: vch:VC1211 hypothetical protein; diguanylate phosphodiesterase	894202..896217	Shewanella sp. MR-4	4251280
YP_732907.1	CDS	Shewmr4_0770	NC_008321.1	896210	896551	D	KEGG: son:SO0927 hypothetical protein; hypothetical protein	896210..896551	Shewanella sp. MR-4	4251281
YP_732908.1	CDS	Shewmr4_0771	NC_008321.1	896558	897007	R	hypothetical protein	complement(896558..897007)	Shewanella sp. MR-4	4251282
YP_732909.1	CDS	Shewmr4_0772	NC_008321.1	897137	898288	R	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase	complement(897137..898288)	Shewanella sp. MR-4	4251283
YP_732910.1	CDS	Shewmr4_0773	NC_008321.1	898768	900762	D	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase	898768..900762	Shewanella sp. MR-4	4251495
YP_732911.1	CDS	Shewmr4_0774	NC_008321.1	900891	901907	D	NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase	900891..901907	Shewanella sp. MR-4	4251496
YP_732912.1	CDS	pgk	NC_008321.1	902040	903215	D	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase	902040..903215	Shewanella sp. MR-4	4251497
YP_732913.1	CDS	Shewmr4_0776	NC_008321.1	903414	904481	D	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase	903414..904481	Shewanella sp. MR-4	4251498
YP_732914.1	CDS	Shewmr4_0777	NC_008321.1	904620	905357	D	PFAM: protein of unknown function DUF481; KEGG: son:SO0934 hypothetical protein; hypothetical protein	904620..905357	Shewanella sp. MR-4	4251499
YP_732915.1	CDS	Shewmr4_0778	NC_008321.1	905598	907067	D	KEGG: son:SO0935 Na+/H+ antiporter; Na+/H+ antiporter	905598..907067	Shewanella sp. MR-4	4251500
YP_732916.1	CDS	Shewmr4_0779	NC_008321.1	907234	907983	D	PFAM: transcriptional regulator domain protein; KEGG: son:SO0936 transcriptional regulator; response regulator receiver protein	907234..907983	Shewanella sp. MR-4	4251501
YP_732917.1	CDS	Shewmr4_0780	NC_008321.1	907976	908524	D	KEGG: son:SO0937 hypothetical protein; hypothetical protein	907976..908524	Shewanella sp. MR-4	4251502
YP_732918.1	CDS	Shewmr4_0781	NC_008321.1	908586	909110	R	KEGG: son:SO0938 hypothetical protein; hypothetical protein	complement(908586..909110)	Shewanella sp. MR-4	4251503
YP_732919.1	CDS	Shewmr4_0782	NC_008321.1	909121	909945	R	KEGG: son:SO0939 cytochrome c, putative; cytochrome c	complement(909121..909945)	Shewanella sp. MR-4	4251504
YP_732920.1	CDS	Shewmr4_0783	NC_008321.1	910387	911130	D	PFAM: transcriptional regulator domain protein; KEGG: son:SO0940 transcriptional regulator-related protein; lysine decarboxylase transcriptional regulator, CadC	910387..911130	Shewanella sp. MR-4	4251505
YP_732921.1	CDS	Shewmr4_0784	NC_008321.1	911123	911653	D	KEGG: son:SO0941 hypothetical protein; hypothetical protein	911123..911653	Shewanella sp. MR-4	4251506
YP_732922.1	CDS	Shewmr4_0785	NC_008321.1	911738	913138	D	KEGG: son:SO0942 hypothetical protein; hypothetical protein	911738..913138	Shewanella sp. MR-4	4251507
YP_732923.1	CDS	Shewmr4_0786	NC_008321.1	913119	915356	R	KEGG: son:SO0943 sensory box protein, putative; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein	complement(913119..915356)	Shewanella sp. MR-4	4251508
YP_732924.1	CDS	Shewmr4_0787	NC_008321.1	915490	916215	R	PFAM: Radical SAM domain protein; KEGG: son:SO0944 hypothetical protein; radical SAM domain-containing protein	complement(915490..916215)	Shewanella sp. MR-4	4251509
YP_732925.1	CDS	Shewmr4_0788	NC_008321.1	916368	919571	R	PFAM: acriflavin resistance protein; KEGG: son:SO0945 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(916368..919571)	Shewanella sp. MR-4	4251510
YP_732926.1	CDS	Shewmr4_0789	NC_008321.1	919571	920788	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO0946 hypothetical protein; RND family efflux transporter MFP subunit	complement(919571..920788)	Shewanella sp. MR-4	4251511
YP_732927.1	CDS	Shewmr4_0790	NC_008321.1	921040	922302	R	facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB	complement(921040..922302)	Shewanella sp. MR-4	4251512
YP_732928.1	CDS	Shewmr4_0791	NC_008321.1	922705	926061	D	KEGG: sdn:Sden_3722 ATP-binding region, ATPase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; MHYT domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase	922705..926061	Shewanella sp. MR-4	4250635
YP_732929.1	CDS	Shewmr4_0792	NC_008321.1	926064	927059	D	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: sdn:Sden_3723 response regulator receiver; response regulator receiver modulated metal dependent phosphohydrolase	926064..927059	Shewanella sp. MR-4	4250636
YP_732930.1	CDS	Shewmr4_0793	NC_008321.1	927134	927844	R	PFAM: methyltransferase small; KEGG: son:SO0948 hypothetical protein; methyltransferase small	complement(927134..927844)	Shewanella sp. MR-4	4250637
YP_732931.1	CDS	Shewmr4_0794	NC_008321.1	928383	929786	D	TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; KEGG: son:SO0949 branched-chain amino acid transport system II carrier protein BrnQ; branched-chain amino acid transport system II carrier protein	928383..929786	Shewanella sp. MR-4	4250638
YP_732932.1	CDS	Shewmr4_0795	NC_008321.1	929869	930771	D	TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO0950 integrase/recombinase XerD; tyrosine recombinase XerD	929869..930771	Shewanella sp. MR-4	4250639
YP_732933.1	CDS	Shewmr4_0796	NC_008321.1	930922	931647	D	KEGG: son:SO0951 thiol:disulfide interchange protein DsbC; thiol:disulfide interchange protein DsbC	930922..931647	Shewanella sp. MR-4	4250640
YP_732934.1	CDS	Shewmr4_0797	NC_008321.1	931740	933464	D	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: son:SO0952 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ	931740..933464	Shewanella sp. MR-4	4250641
YP_732935.1	CDS	Shewmr4_0798	NC_008321.1	933503	933832	D	KEGG: son:SO0953 hypothetical protein; hypothetical protein	933503..933832	Shewanella sp. MR-4	4250642
YP_732936.1	CDS	Shewmr4_0799	NC_008321.1	933846	934280	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0954 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	933846..934280	Shewanella sp. MR-4	4250643
YP_732937.1	CDS	Shewmr4_0800	NC_008321.1	934744	936321	R	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0956 alkyl hydroperoxide reductase, F subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase	complement(934744..936321)	Shewanella sp. MR-4	4250644
YP_732938.1	CDS	Shewmr4_0801	NC_008321.1	936559	937128	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO0958 alkyl hydroperoxide reductase, C subunit; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen	complement(936559..937128)	Shewanella sp. MR-4	4250645
YP_732939.1	CDS	Shewmr4_0802	NC_008321.1	937470	939005	R	PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: son:SO0959 cytosol aminopeptidase; leucyl aminopeptidase	complement(937470..939005)	Shewanella sp. MR-4	4250646
YP_732940.1	CDS	Shewmr4_0803	NC_008321.1	939095	939838	R	PFAM: Spermine synthase; KEGG: son:SO0960 hypothetical spermidine synthase; spermine synthase	complement(939095..939838)	Shewanella sp. MR-4	4250647
YP_732941.1	CDS	Shewmr4_0804	NC_008321.1	939939	940484	D	KEGG: son:SO0961 hypothetical protein; hypothetical protein	939939..940484	Shewanella sp. MR-4	4250648
YP_732942.1	CDS	Shewmr4_0805	NC_008321.1	940733	941278	D	KEGG: son:SO0962 hypothetical protein; hypothetical protein	940733..941278	Shewanella sp. MR-4	4250649
YP_732943.1	CDS	Shewmr4_0806	NC_008321.1	941375	942112	R	PFAM: dienelactone hydrolase; KEGG: pha:PSHAa2188 hydrolase; dienelactone hydrolase	complement(941375..942112)	Shewanella sp. MR-4	4250650
YP_732944.1	CDS	Shewmr4_0807	NC_008321.1	942180	943169	R	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO0968 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	complement(942180..943169)	Shewanella sp. MR-4	4250651
YP_732945.1	CDS	Shewmr4_0808	NC_008321.1	943415	945205	R	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0970 fumarate reductase flavoprotein subunit precursor; flavocytochrome c	complement(943415..945205)	Shewanella sp. MR-4	4250740
YP_732946.1	CDS	Shewmr4_0809	NC_008321.1	945710	946120	D	KEGG: son:SO0971 hypothetical protein; hypothetical protein	945710..946120	Shewanella sp. MR-4	4250741
YP_732947.1	CDS	Shewmr4_0810	NC_008321.1	946117	946641	D	PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0972 hypothetical protein; type 12 methyltransferase	946117..946641	Shewanella sp. MR-4	4250742
YP_732948.1	CDS	Shewmr4_0811	NC_008321.1	946703	946993	D	KEGG: son:SO0973 hypothetical protein; hypothetical protein	946703..946993	Shewanella sp. MR-4	4250743
YP_732949.1	CDS	Shewmr4_0812	NC_008321.1	947112	947297	R	KEGG: son:SO0974 hypothetical protein; hypothetical protein	complement(947112..947297)	Shewanella sp. MR-4	4250744
YP_732950.1	CDS	Shewmr4_0813	NC_008321.1	947396	948820	R	KEGG: son:SO0975 hypothetical protein; hypothetical protein	complement(947396..948820)	Shewanella sp. MR-4	4250745
YP_732951.1	CDS	Shewmr4_0814	NC_008321.1	949047	949472	R	PFAM: OsmC family protein; KEGG: son:SO0976 organic hydroperoxide resistance protein; OsmC family protein	complement(949047..949472)	Shewanella sp. MR-4	4250746
YP_732952.1	CDS	Shewmr4_0815	NC_008321.1	949601	950098	D	PFAM: regulatory protein, MarR; KEGG: son:SO0977 transcriptional regulator, MarR family; MarR family transcriptional regulator	949601..950098	Shewanella sp. MR-4	4250747
YP_732953.1	CDS	Shewmr4_0816	NC_008321.1	950164	951354	D	PFAM: FAD dependent oxidoreductase; KEGG: son:SO0978 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase	950164..951354	Shewanella sp. MR-4	4250748
YP_732954.1	CDS	rumB	NC_008321.1	951534	952688	D	RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase	951534..952688	Shewanella sp. MR-4	4250749
YP_732955.1	CDS	Shewmr4_0818	NC_008321.1	952703	953932	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO0981 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(952703..953932)	Shewanella sp. MR-4	4250750
YP_732956.1	CDS	Shewmr4_0819	NC_008321.1	953944	954660	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pha:PSHAa0853 response regulator (activator) in two-component regulatory; two component transcriptional regulator	complement(953944..954660)	Shewanella sp. MR-4	4250751
YP_732957.1	CDS	Shewmr4_0820	NC_008321.1	954657	955076	R	hypothetical protein	complement(954657..955076)	Shewanella sp. MR-4	4250752
YP_732958.1	CDS	Shewmr4_0821	NC_008321.1	955066	955908	R	PFAM: MltA-interacting MipA family protein; KEGG: son:SO3592 putative outer membrane protein; MltA-interacting MipA family protein	complement(955066..955908)	Shewanella sp. MR-4	4250753
YP_732959.1	CDS	Shewmr4_0822	NC_008321.1	956202	961319	D	TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: son:SO4539 serine protease, subtilase family; cell wall anchor domain-containing protein	956202..961319	Shewanella sp. MR-4	4250754
YP_732960.1	CDS	Shewmr4_0823	NC_008321.1	961482	962654	D	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: son:SO0986 chromate transporter, putative; chromate transporter	961482..962654	Shewanella sp. MR-4	4250755
YP_732961.1	CDS	Shewmr4_0824	NC_008321.1	962790	964454	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: son:SO0987 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	962790..964454	Shewanella sp. MR-4	4250756
YP_732962.1	CDS	Shewmr4_0825	NC_008321.1	964562	968860	R	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO0988 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha	complement(964562..968860)	Shewanella sp. MR-4	4250757
YP_732963.1	CDS	Shewmr4_0826	NC_008321.1	969416	970474	D	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: sdn:Sden_3128 peptide chain release factor 2; peptide chain release factor 2	969416..970474	Shewanella sp. MR-4	4251966
YP_732964.1	CDS	lysS	NC_008321.1	970504	972006	D	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase	970504..972006	Shewanella sp. MR-4	4251967
YP_732965.1	CDS	pbpG	NC_008321.1	972370	973326	D	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase	972370..973326	Shewanella sp. MR-4	4251968
YP_732966.1	CDS	Shewmr4_0829	NC_008321.1	973516	975078	D	PFAM: Rhomboid family protein; KEGG: son:SO1000 rhomboid family protein; rhomboid family protein	973516..975078	Shewanella sp. MR-4	4251969
YP_732967.1	CDS	Shewmr4_0830	NC_008321.1	975171	977480	R	KEGG: son:SO1002 hypothetical protein; hypothetical protein	complement(975171..977480)	Shewanella sp. MR-4	4251970
YP_732968.1	CDS	Shewmr4_0831	NC_008321.1	977641	979374	R	PFAM: MORN variant repeat protein; KEGG: son:SO1003 hypothetical protein; MORN repeat-containing protein	complement(977641..979374)	Shewanella sp. MR-4	4251971
YP_732969.1	CDS	Shewmr4_0832	NC_008321.1	979384	981672	R	KEGG: son:SO1004 hypothetical protein; hypothetical protein	complement(979384..981672)	Shewanella sp. MR-4	4251972
YP_732970.1	CDS	Shewmr4_0833	NC_008321.1	981944	982906	D	KEGG: son:SO1006 dienelactone hydrolase family protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: dienelactone hydrolase; twin-arginine translocation pathway signal	981944..982906	Shewanella sp. MR-4	4251973
YP_732971.1	CDS	Shewmr4_0834	NC_008321.1	983557	985392	D	hypothetical protein	983557..985392	Shewanella sp. MR-4	4251974
YP_732972.1	CDS	Shewmr4_0835	NC_008321.1	986382	986912	D	KEGG: noc:Noc_0407 hypothetical protein; hypothetical protein	986382..986912	Shewanella sp. MR-4	4251975
YP_732973.1	CDS	Shewmr4_0836	NC_008321.1	986933	987355	D	hypothetical protein	986933..987355	Shewanella sp. MR-4	4251976
YP_732974.1	CDS	Shewmr4_0837	NC_008321.1	987431	989365	D	KEGG: pfl:PFL_1846 hypothetical protein; hypothetical protein	987431..989365	Shewanella sp. MR-4	4251977
YP_732975.1	CDS	metH	NC_008321.1	989734	993468	R	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase	complement(989734..993468)	Shewanella sp. MR-4	4251978
YP_732976.1	CDS	Shewmr4_0839	NC_008321.1	993679	994401	D	PFAM: Phosphoglycerate mutase; KEGG: son:SO1031 alpha-ribazole-5'-phosphate phosphatase, putative; phosphoglycerate mutase	993679..994401	Shewanella sp. MR-4	4251979
YP_732977.1	CDS	Shewmr4_0840	NC_008321.1	994874	995839	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1033 iron-compound ABC transporter, ATP-binding protein, putative; ABC transporter-like protein	994874..995839	Shewanella sp. MR-4	4251980
YP_732978.1	CDS	Shewmr4_0841	NC_008321.1	995836	996984	D	PFAM: transport system permease protein; KEGG: son:SO1034 iron-compound ABC transporter, permease protein; transport system permease	995836..996984	Shewanella sp. MR-4	4251981
YP_732979.1	CDS	cobT	NC_008321.1	997259	998311	D	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	997259..998311	Shewanella sp. MR-4	4251982
YP_732980.1	CDS	cobS	NC_008321.1	998408	999196	D	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase	998408..999196	Shewanella sp. MR-4	4251826
YP_732981.1	CDS	Shewmr4_0844	NC_008321.1	999193	999795	D	PFAM: cobalbumin biosynthesis enzyme; KEGG: son:SO1037 cobinamide kinase/cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase	999193..999795	Shewanella sp. MR-4	4251827
YP_732982.1	CDS	Shewmr4_0845	NC_008321.1	999883	1001508	D	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase	999883..1001508	Shewanella sp. MR-4	4251828
YP_732983.1	CDS	Shewmr4_0846	NC_008321.1	1001537	1002172	D	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase	1001537..1002172	Shewanella sp. MR-4	4251829
YP_732984.1	CDS	Shewmr4_0847	NC_008321.1	1002328	1003365	D	KEGG: son:SO3711 hypothetical protein; hypothetical protein	1002328..1003365	Shewanella sp. MR-4	4251830
YP_732985.1	CDS	Shewmr4_0848	NC_008321.1	1003380	1004204	D	PFAM: periplasmic binding protein; KEGG: son:SO3709 ABC transporter, periplasmic substrate-binding protein, putative; periplasmic binding protein	1003380..1004204	Shewanella sp. MR-4	4251831
YP_732986.1	CDS	Shewmr4_0849	NC_008321.1	1004283	1004666	D	KEGG: son:SO3708 hypothetical protein; hypothetical protein	1004283..1004666	Shewanella sp. MR-4	4251832
YP_732987.1	CDS	Shewmr4_0850	NC_008321.1	1004720	1005034	D	KEGG: vvu:VV12513 hypothetical protein; hypothetical protein	1004720..1005034	Shewanella sp. MR-4	4251833
YP_732988.1	CDS	Shewmr4_0851	NC_008321.1	1005378	1005602	D	KEGG: son:SO3704 hypothetical protein; hypothetical protein	1005378..1005602	Shewanella sp. MR-4	4251834
YP_732989.1	CDS	Shewmr4_0852	NC_008321.1	1006485	1006880	D	PFAM: methylation site containing protein; KEGG: neu:NE1746 fimbrial protein pilin; methylation site containing protein	1006485..1006880	Shewanella sp. MR-4	4251835
YP_732990.1	CDS	Shewmr4_0853	NC_008321.1	1006905	1007363	D	PFAM: methylation site containing protein; KEGG: psp:PSPPH_0726 type IV pilin, putative; methylation site containing protein	1006905..1007363	Shewanella sp. MR-4	4251836
YP_732991.1	CDS	Shewmr4_0854	NC_008321.1	1007393	1007809	D	TIGRFAM: type IV pilus modification protein PilV; PFAM: methylation site containing protein; KEGG: csa:Csal_0486 methylation; type IV pilus modification protein PilV	1007393..1007809	Shewanella sp. MR-4	4251837
YP_732992.1	CDS	Shewmr4_0855	NC_008321.1	1007818	1008354	D	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: xft:PD0021 type IV pilus assembly protein PilW; prepilin-type cleavage/methylation-like protein	1007818..1008354	Shewanella sp. MR-4	4251838
YP_732993.1	CDS	Shewmr4_0856	NC_008321.1	1008421	1009590	D	KEGG: sat:SYN_01756 hypothetical membrane protein; hypothetical protein	1008421..1009590	Shewanella sp. MR-4	4251839
YP_732994.1	CDS	Shewmr4_0857	NC_008321.1	1009677	1009970	R	KEGG: son:SO3699.1 hypothetical protein; hypothetical protein	complement(1009677..1009970)	Shewanella sp. MR-4	4251840
YP_732995.1	CDS	Shewmr4_0858	NC_008321.1	1010217	1010573	R	PFAM: protein of unknown function DUF1486; KEGG: son:SO3697 steroid delta-isomerase domain protein; hypothetical protein	complement(1010217..1010573)	Shewanella sp. MR-4	4251841
YP_732996.1	CDS	Shewmr4_0859	NC_008321.1	1010733	1011779	R	KEGG: son:SO3696 hypothetical protein; hypothetical protein	complement(1010733..1011779)	Shewanella sp. MR-4	4251842
YP_732997.1	CDS	Shewmr4_0860	NC_008321.1	1011915	1012958	R	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase	complement(1011915..1012958)	Shewanella sp. MR-4	4251843
YP_732998.1	CDS	Shewmr4_0861	NC_008321.1	1013317	1014579	D	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SO3694 HlyD family secretion protein; RND family efflux transporter MFP subunit	1013317..1014579	Shewanella sp. MR-4	4250583
YP_732999.1	CDS	Shewmr4_0862	NC_008321.1	1014579	1014950	D	KEGG: son:SO3693 hypothetical protein; hypothetical protein	1014579..1014950	Shewanella sp. MR-4	4250584
YP_733000.1	CDS	Shewmr4_0863	NC_008321.1	1015051	1015791	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3692 ABC transporter, ATP-binding protein; ABC transporter-like protein	1015051..1015791	Shewanella sp. MR-4	4250585
YP_733001.1	CDS	Shewmr4_0864	NC_008321.1	1015800	1017104	D	PFAM: protein of unknown function DUF214; KEGG: sdn:Sden_2849 protein of unknown function DUF214; hypothetical protein	1015800..1017104	Shewanella sp. MR-4	4250586
YP_733002.1	CDS	Shewmr4_0865	NC_008321.1	1017116	1018315	D	PFAM: protein of unknown function DUF214; KEGG: son:SO3690 ABC transporter, permease protein; hypothetical protein	1017116..1018315	Shewanella sp. MR-4	4250587
YP_733003.1	CDS	Shewmr4_0866	NC_008321.1	1018412	1019866	D	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: son:SO3689 sigma-54 dependent nitrogen response regulator; two component, sigma54 specific, Fis family transcriptional regulator	1018412..1019866	Shewanella sp. MR-4	4250588
YP_733004.1	CDS	Shewmr4_0867	NC_008321.1	1019908	1021575	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3688 nitrogen regulation protein NtrY, putative; periplasmic sensor signal transduction histidine kinase	1019908..1021575	Shewanella sp. MR-4	4250589
YP_733005.1	CDS	Shewmr4_0868	NC_008321.1	1021808	1022218	D	KEGG: son:SO3687 curli production assembly/transport component CsgE, putative; curli production assembly/transport component CsgE	1021808..1022218	Shewanella sp. MR-4	4250590
YP_733006.1	CDS	Shewmr4_0869	NC_008321.1	1022229	1022624	D	KEGG: son:SO3686 curli production assembly/transport component CsgF, putative; curli production assembly/transport component CsgF	1022229..1022624	Shewanella sp. MR-4	4250591
YP_733007.1	CDS	Shewmr4_0870	NC_008321.1	1022624	1023430	D	PFAM: Curli production assembly/transport component CsgG; KEGG: son:SO3685 curli production assembly/transport component CsgG, putative; curli production assembly/transport component CsgG	1022624..1023430	Shewanella sp. MR-4	4250592
YP_733008.1	CDS	Shewmr4_0871	NC_008321.1	1023489	1024097	R	PFAM: regulatory protein, TetR; KEGG: son:SO3684 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(1023489..1024097)	Shewanella sp. MR-4	4250593
YP_733009.1	CDS	Shewmr4_0872	NC_008321.1	1024119	1025543	R	PFAM: aldehyde dehydrogenase; KEGG: son:SO3683 coniferyl aldehyde dehydrogenase; aldehyde dehydrogenase	complement(1024119..1025543)	Shewanella sp. MR-4	4250594
YP_733010.1	CDS	Shewmr4_0873	NC_008321.1	1025741	1026139	D	KEGG: son:SO3682 hypothetical protein; hypothetical protein	1025741..1026139	Shewanella sp. MR-4	4250595
YP_733011.1	CDS	Shewmr4_0874	NC_008321.1	1026159	1026590	D	PFAM: UspA domain protein; KEGG: son:SO3681 universal stress protein family; UspA domain-containing protein	1026159..1026590	Shewanella sp. MR-4	4250596
YP_733012.1	CDS	Shewmr4_0875	NC_008321.1	1026753	1027202	D	PFAM: UspA domain protein; KEGG: son:SO3680 universal stress protein family; UspA domain-containing protein	1026753..1027202	Shewanella sp. MR-4	4250597
YP_733013.1	CDS	Shewmr4_0876	NC_008321.1	1027206	1028063	R	KEGG: sdn:Sden_3307 extracellular solute-binding protein, family 3; extracellular solute-binding protein	complement(1027206..1028063)	Shewanella sp. MR-4	4250598
YP_733014.1	CDS	Shewmr4_0877	NC_008321.1	1028187	1028738	R	PFAM: protein of unknown function DUF924; KEGG: ilo:IL1577 hypothetical protein; hypothetical protein	complement(1028187..1028738)	Shewanella sp. MR-4	4250599
YP_733015.1	CDS	Shewmr4_0878	NC_008321.1	1028937	1029272	D	KEGG: son:SO3679 hypothetical protein; hypothetical protein	1028937..1029272	Shewanella sp. MR-4	4251669
YP_733016.1	CDS	Shewmr4_0879	NC_008321.1	1029269	1030744	D	PFAM: FAD dependent oxidoreductase; KEGG: son:SO3678 hypothetical protein; FAD dependent oxidoreductase	1029269..1030744	Shewanella sp. MR-4	4251670
YP_733017.1	CDS	Shewmr4_0880	NC_008321.1	1030841	1031206	D	KEGG: son:SO3677 hypothetical protein; hypothetical protein	1030841..1031206	Shewanella sp. MR-4	4251671
YP_733018.1	CDS	Shewmr4_0881	NC_008321.1	1031203	1031544	R	KEGG: son:SO3676 hypothetical protein; hypothetical protein	complement(1031203..1031544)	Shewanella sp. MR-4	4251672
YP_733019.1	CDS	Shewmr4_0882	NC_008321.1	1031678	1033519	D	KEGG: son:SO3665 ABC transporter, ATP-binding/permease protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein	1031678..1033519	Shewanella sp. MR-4	4251673
YP_733020.1	CDS	Shewmr4_0883	NC_008321.1	1033621	1035225	R	PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase	complement(1033621..1035225)	Shewanella sp. MR-4	4251674
YP_733021.1	CDS	Shewmr4_0884	NC_008321.1	1035462	1036244	R	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: dps:DP2240 probable methionine aminopeptidase, MAP; methionine aminopeptidase, type I	complement(1035462..1036244)	Shewanella sp. MR-4	4251675
YP_733022.1	CDS	Shewmr4_0885	NC_008321.1	1036237	1036461	R	KEGG: ilo:IL2066 hypothetical protein; hypothetical protein	complement(1036237..1036461)	Shewanella sp. MR-4	4251676
YP_733023.1	CDS	Shewmr4_0886	NC_008321.1	1036792	1038222	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sdn:Sden_2933 4Fe-4S ferredoxin, iron-sulfur binding; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	complement(1036792..1038222)	Shewanella sp. MR-4	4251677
YP_733024.1	CDS	Shewmr4_0887	NC_008321.1	1038382	1039848	R	KEGG: son:SO3660 sigma-54 dependent transcriptional regulator/sensory box protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase; Fis family transcriptional regulator	complement(1038382..1039848)	Shewanella sp. MR-4	4251678
YP_733025.1	CDS	Shewmr4_0888	NC_008321.1	1040359	1040904	R	KEGG: son:SO3659 thiol:disulfide interchange protein, putative; thiol:disulfide interchange protein	complement(1040359..1040904)	Shewanella sp. MR-4	4251679
YP_733026.1	CDS	Shewmr4_0889	NC_008321.1	1041107	1042657	D	PFAM: peptidase S10, serine carboxypeptidase; KEGG: pcu:pc0501 hypothetical protein; peptidase S10, serine carboxypeptidase	1041107..1042657	Shewanella sp. MR-4	4251680
YP_733027.1	CDS	Shewmr4_0890	NC_008321.1	1042744	1043358	D	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO3657 transporter, LysE family; lysine exporter protein LysE/YggA	1042744..1043358	Shewanella sp. MR-4	4251681
YP_733028.1	CDS	Shewmr4_0891	NC_008321.1	1043479	1043796	R	KEGG: son:SO3656 hypothetical protein; hypothetical protein	complement(1043479..1043796)	Shewanella sp. MR-4	4251682
YP_733029.1	CDS	Shewmr4_0892	NC_008321.1	1044192	1044626	D	KEGG: cvi:CV1035 hypothetical protein; hypothetical protein	1044192..1044626	Shewanella sp. MR-4	4251683
YP_733030.1	CDS	Shewmr4_0893	NC_008321.1	1044926	1045585	D	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase	1044926..1045585	Shewanella sp. MR-4	4251684
YP_733031.1	CDS	Shewmr4_0894	NC_008321.1	1045662	1046657	R	PFAM: Polyprenyl synthetase; KEGG: son:SO3653 octaprenyl-diphosphate synthase; trans-hexaprenyltranstransferase	complement(1045662..1046657)	Shewanella sp. MR-4	4251685
YP_733032.1	CDS	rplU	NC_008321.1	1046907	1047218	D	TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: son:SO3652 ribosomal protein L21; 50S ribosomal protein L21	1046907..1047218	Shewanella sp. MR-4	4251686
YP_733033.1	CDS	rpmA	NC_008321.1	1047233	1047487	D	involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27	1047233..1047487	Shewanella sp. MR-4	4251687
YP_733034.1	CDS	obgE	NC_008321.1	1047700	1048866	D	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE	1047700..1048866	Shewanella sp. MR-4	4251688
YP_733035.1	CDS	Shewmr4_0898	NC_008321.1	1048894	1049655	D	PFAM: protein of unknown function DUF1212; KEGG: son:SO3648 hypothetical protein; hypothetical protein	1048894..1049655	Shewanella sp. MR-4	4251689
YP_733036.1	CDS	Shewmr4_0899	NC_008321.1	1049652	1050125	D	KEGG: son:SO3647 hypothetical protein; hypothetical protein	1049652..1050125	Shewanella sp. MR-4	4251690
YP_733037.1	CDS	Shewmr4_0900	NC_008321.1	1050148	1050630	D	PFAM: dihydrofolate reductase region; KEGG: son:SO3646 dihydrofolate reductase; dihydrofolate reductase	1050148..1050630	Shewanella sp. MR-4	4251691
YP_733038.1	CDS	Shewmr4_0901	NC_008321.1	1050833	1051246	D	KEGG: son:SO3645 hypothetical protein; hypothetical protein	1050833..1051246	Shewanella sp. MR-4	4251692
YP_733039.1	CDS	Shewmr4_0902	NC_008321.1	1051497	1053518	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3642 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(1051497..1053518)	Shewanella sp. MR-4	4251693
YP_733040.1	CDS	apaH	NC_008321.1	1053615	1054439	R	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase	complement(1053615..1054439)	Shewanella sp. MR-4	4251694
YP_733041.1	CDS	apaG	NC_008321.1	1054461	1054841	R	protein associated with Co2+ and Mg2+ efflux; ApaG protein	complement(1054461..1054841)	Shewanella sp. MR-4	4251695
YP_733042.1	CDS	ksgA	NC_008321.1	1054897	1055703	R	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase	complement(1054897..1055703)	Shewanella sp. MR-4	4251696
YP_733043.1	CDS	pdxA	NC_008321.1	1055718	1056704	R	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase	complement(1055718..1056704)	Shewanella sp. MR-4	4251697
YP_733044.1	CDS	Shewmr4_0907	NC_008321.1	1056711	1058015	R	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO3637 survival protein surA; PpiC-type peptidyl-prolyl cis-trans isomerase	complement(1056711..1058015)	Shewanella sp. MR-4	4251698
YP_733045.1	CDS	Shewmr4_0908	NC_008321.1	1058236	1060533	R	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: son:SO3636 organic solvent tolerance protein; organic solvent tolerance protein	complement(1058236..1060533)	Shewanella sp. MR-4	4251699
YP_733046.1	CDS	Shewmr4_0909	NC_008321.1	1060649	1061740	D	PFAM: aminoglycoside phosphotransferase; KEGG: son:SO3635 hypothetical phosphotransferase; aminoglycoside phosphotransferase	1060649..1061740	Shewanella sp. MR-4	4251700
YP_733047.1	CDS	Shewmr4_0910	NC_008321.1	1061737	1062405	D	PFAM: Nucleotidyl transferase; KEGG: son:SO3634 nucleotidyltransferase family protein; nucleotidyl transferase	1061737..1062405	Shewanella sp. MR-4	4251701
YP_733048.1	CDS	djlA	NC_008321.1	1062515	1063303	D	functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein	1062515..1063303	Shewanella sp. MR-4	4251702
YP_733049.1	CDS	Shewmr4_0912	NC_008321.1	1063359	1064003	D	KEGG: son:SO3632 hypothetical protein; hypothetical protein	1063359..1064003	Shewanella sp. MR-4	4251703
YP_733050.1	CDS	Shewmr4_0913	NC_008321.1	1064049	1065002	D	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO3631 glycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding	1064049..1065002	Shewanella sp. MR-4	4251844
YP_733051.1	CDS	Shewmr4_0914	NC_008321.1	1065396	1066409	R	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3360 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein	complement(1065396..1066409)	Shewanella sp. MR-4	4251845
YP_733052.1	CDS	Shewmr4_0915	NC_008321.1	1066826	1067251	R	KEGG: bcz:BCZK4404 hypothetical protein; hypothetical protein	complement(1066826..1067251)	Shewanella sp. MR-4	4251846
YP_733053.1	CDS	Shewmr4_0916	NC_008321.1	1068976	1070433	D	PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_04311 outer membrane protein and related peptidoglycan-associated (LipO)protein; OmpA/MotB domain-containing protein	1068976..1070433	Shewanella sp. MR-4	4251847
YP_733054.1	CDS	Shewmr4_0917	NC_008321.1	1070596	1071321	R	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_0685 pseudouridine synthase, Rsu; pseudouridine synthase, Rsu	complement(1070596..1071321)	Shewanella sp. MR-4	4251848
YP_733055.1	CDS	Shewmr4_0918	NC_008321.1	1071333	1072025	R	KEGG: son:SO1086 hypothetical protein; hypothetical protein	complement(1071333..1072025)	Shewanella sp. MR-4	4251849
YP_733056.1	CDS	Shewmr4_0919	NC_008321.1	1072212	1073549	R	PFAM: Na+/H+ antiporter NhaC; KEGG: son:SO1087 Na+/H+ antiporter family protein; Na+/H+ antiporter NhaC	complement(1072212..1073549)	Shewanella sp. MR-4	4251850
YP_733057.1	CDS	Shewmr4_0920	NC_008321.1	1074098	1075006	D	KEGG: tbd:Tbd_0710 hypothetical protein; hypothetical protein	1074098..1075006	Shewanella sp. MR-4	4251851
YP_733058.1	CDS	Shewmr4_0921	NC_008321.1	1075086	1075637	D	PFAM: FMN-binding domain protein; KEGG: tbd:Tbd_0709 putative signal peptide protein; FMN-binding domain-containing protein	1075086..1075637	Shewanella sp. MR-4	4251852
YP_733059.1	CDS	Shewmr4_0922	NC_008321.1	1075637	1076485	D	KEGG: son:SO1090 ApbE family protein, putative; ApbE family protein	1075637..1076485	Shewanella sp. MR-4	4251853
YP_733060.1	CDS	Shewmr4_0923	NC_008321.1	1076541	1077008	D	KEGG: tcx:Tcr_0415 hypothetical protein; hypothetical protein	1076541..1077008	Shewanella sp. MR-4	4251854
YP_733061.1	CDS	Shewmr4_0924	NC_008321.1	1077082	1078713	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ilo:IL2343 methyl-accepting chemotaxis protein (contains HAMP domain); methyl-accepting chemotaxis sensory transducer	complement(1077082..1078713)	Shewanella sp. MR-4	4251855
YP_733062.1	CDS	Shewmr4_0925	NC_008321.1	1078856	1079746	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1091 hypothetical protein; hypothetical protein	complement(1078856..1079746)	Shewanella sp. MR-4	4251856
YP_733063.1	CDS	Shewmr4_0926	NC_008321.1	1079954	1080733	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO1092 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator	1079954..1080733	Shewanella sp. MR-4	4251857
YP_733064.1	CDS	Shewmr4_0927	NC_008321.1	1081301	1081687	R	KEGG: son:SO1094 hypothetical transcription elongation factor; GreA/GreB family elongation factor	complement(1081301..1081687)	Shewanella sp. MR-4	4251858
YP_733065.1	CDS	Shewmr4_0928	NC_008321.1	1082285	1083577	D	KEGG: son:SO1095 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; O-acetylhomoserine/O-acetylserine sulfhydrylase	1082285..1083577	Shewanella sp. MR-4	4251859
YP_733066.1	CDS	Shewmr4_0929	NC_008321.1	1083641	1086787	R	KEGG: son:SO1096 hypothetical protein; hypothetical protein	complement(1083641..1086787)	Shewanella sp. MR-4	4251860
YP_733067.1	CDS	Shewmr4_0930	NC_008321.1	1086993	1088126	R	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1097 putative ribosomal RNA small subunit methyltransferase D; rRNA (guanine-N(2)-)-methyltransferase	complement(1086993..1088126)	Shewanella sp. MR-4	4251861
YP_733068.1	CDS	Shewmr4_0931	NC_008321.1	1088304	1088963	D	PFAM: 2OG-Fe(II) oxygenase; KEGG: son:SO1098 hypothetical alkylated DNA repair protein; DNA-N1-methyladenine dioxygenase	1088304..1088963	Shewanella sp. MR-4	4251862
YP_733069.1	CDS	Shewmr4_0932	NC_008321.1	1089098	1089418	D	PFAM: BolA family protein; KEGG: son:SO1099 bolA protein; transcriptional regulator BolA	1089098..1089418	Shewanella sp. MR-4	4251863
YP_733070.1	CDS	Shewmr4_0933	NC_008321.1	1089622	1090737	D	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: son:SO1100 extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter- DctP subunit	1089622..1090737	Shewanella sp. MR-4	4251864
YP_733071.1	CDS	Shewmr4_0934	NC_008321.1	1090893	1091402	D	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase	1090893..1091402	Shewanella sp. MR-4	4251865
YP_733072.1	CDS	Shewmr4_0935	NC_008321.1	1091557	1093608	D	PFAM: TonB-dependent receptor; KEGG: son:SO1102 TonB-dependent receptor C-terminal region domain lipoprotein; TonB-dependent receptor	1091557..1093608	Shewanella sp. MR-4	4251866
YP_733073.1	CDS	Shewmr4_0936	NC_008321.1	1094012	1095346	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A	1094012..1095346	Shewanella sp. MR-4	4251867
YP_733074.1	CDS	Shewmr4_0937	NC_008321.1	1095346	1096545	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B	1095346..1096545	Shewanella sp. MR-4	4251868
YP_733075.1	CDS	Shewmr4_0938	NC_008321.1	1096538	1097326	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C	1096538..1097326	Shewanella sp. MR-4	4251869
YP_733076.1	CDS	Shewmr4_0939	NC_008321.1	1097326	1097958	D	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D	1097326..1097958	Shewanella sp. MR-4	4251870
YP_733077.1	CDS	Shewmr4_0940	NC_008321.1	1097965	1098573	D	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E	1097965..1098573	Shewanella sp. MR-4	4251871
YP_733078.1	CDS	Shewmr4_0941	NC_008321.1	1098620	1099876	D	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F	1098620..1099876	Shewanella sp. MR-4	4251872
YP_733079.1	CDS	Shewmr4_0942	NC_008321.1	1099909	1101033	D	PFAM: ApbE family lipoprotein; KEGG: son:SO1109 thiamin biosynthesis lipoprotein ApbE; ApbE family lipoprotein	1099909..1101033	Shewanella sp. MR-4	4251873
YP_733080.1	CDS	Shewmr4_0943	NC_008321.1	1101045	1101269	D	PFAM: protein of unknown function DUF539; KEGG: son:SO1110 hypothetical protein; hypothetical protein	1101045..1101269	Shewanella sp. MR-4	4251874
YP_733081.1	CDS	Shewmr4_0944	NC_008321.1	1101644	1102117	D	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: son:SO1111 bacterioferritin subunit 2; bacterioferritin	1101644..1102117	Shewanella sp. MR-4	4251875
YP_733082.1	CDS	Shewmr4_0945	NC_008321.1	1102127	1102594	D	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: son:SO1112 bacterioferritin subunit 1; bacterioferritin	1102127..1102594	Shewanella sp. MR-4	4251876
YP_733083.1	CDS	Shewmr4_0946	NC_008321.1	1102894	1104897	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO1112.1 hypothetical chemotactic transducer; methyl-accepting chemotaxis sensory transducer	1102894..1104897	Shewanella sp. MR-4	4251877
YP_733084.1	CDS	Shewmr4_0947	NC_008321.1	1105048	1106127	D	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV	1105048..1106127	Shewanella sp. MR-4	4251878
YP_733085.1	CDS	Shewmr4_0948	NC_008321.1	1106307	1107770	R	KEGG: son:SO1115 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; M20C family Xaa-His dipeptidase	complement(1106307..1107770)	Shewanella sp. MR-4	4251599
YP_733086.1	CDS	Shewmr4_0949	NC_008321.1	1107989	1109527	D	PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: son:SO1117 cytosol aminopeptidase, putative; peptidase M17, leucyl aminopeptidase domain-containing protein	1107989..1109527	Shewanella sp. MR-4	4251600
YP_733087.1	CDS	Shewmr4_0950	NC_008321.1	1110440	1112611	D	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ilo:IL1581 outer membrane receptor for ferric siderophore; TonB-dependent siderophore receptor	1110440..1112611	Shewanella sp. MR-4	4251601
YP_733088.1	CDS	Shewmr4_0951	NC_008321.1	1113020	1114309	D	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO1120 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease	1113020..1114309	Shewanella sp. MR-4	4251602
YP_733089.1	CDS	Shewmr4_0952	NC_008321.1	1114486	1115604	D	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase	1114486..1115604	Shewanella sp. MR-4	4251603
YP_733090.1	CDS	proA	NC_008321.1	1115617	1116894	D	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase	1115617..1116894	Shewanella sp. MR-4	4251604
YP_733091.1	CDS	Shewmr4_0954	NC_008321.1	1116968	1117270	R	KEGG: son:SO1123 hypothetical protein; hypothetical protein	complement(1116968..1117270)	Shewanella sp. MR-4	4251605
YP_733092.1	CDS	Shewmr4_0955	NC_008321.1	1117395	1117871	R	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: son:SO1124 conserved hypothetical protein TIGR00011; ybaK/ebsC protein	complement(1117395..1117871)	Shewanella sp. MR-4	4251606
YP_733093.1	CDS	Shewmr4_0956	NC_008321.1	1118005	1118925	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1125 integral membrane domain protein; hypothetical protein	complement(1118005..1118925)	Shewanella sp. MR-4	4251607
YP_733094.1	CDS	dnaK	NC_008321.1	1119212	1121131	D	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK	1119212..1121131	Shewanella sp. MR-4	4251608
YP_733095.1	CDS	Shewmr4_0958	NC_008321.1	1121242	1122375	D	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ	1121242..1122375	Shewanella sp. MR-4	4251609
YP_733096.1	CDS	Shewmr4_0959	NC_008321.1	1122477	1123364	D	hypothetical protein	1122477..1123364	Shewanella sp. MR-4	4251610
YP_733097.1	CDS	Shewmr4_0960	NC_008321.1	1123923	1125278	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO1136 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	1123923..1125278	Shewanella sp. MR-4	4251611
YP_733098.1	CDS	Shewmr4_0961	NC_008321.1	1125402	1125995	D	PFAM: GCN5-related N-acetyltransferase; KEGG: bpm:BURPS1710b_2160 ribosomal-protein-serine acetyltransferase; GCN5-related N-acetyltransferase	1125402..1125995	Shewanella sp. MR-4	4251612
YP_733099.1	CDS	Shewmr4_0962	NC_008321.1	1126136	1126945	D	PFAM: peptidase M48, Ste24p; KEGG: son:SO1137 hypothetical protein; peptidase M48, Ste24p	1126136..1126945	Shewanella sp. MR-4	4251613
YP_733100.1	CDS	Shewmr4_0963	NC_008321.1	1127138	1127755	D	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1139 peptidyl-prolyl cis-trans isomerase FklB; peptidylprolyl isomerase, FKBP-type	1127138..1127755	Shewanella sp. MR-4	4251614
YP_733101.1	CDS	Shewmr4_0964	NC_008321.1	1127828	1128640	D	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase	1127828..1128640	Shewanella sp. MR-4	4251615
YP_733102.1	CDS	Shewmr4_0965	NC_008321.1	1128808	1129968	D	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit	1128808..1129968	Shewanella sp. MR-4	4251616
YP_733103.1	CDS	carB	NC_008321.1	1129996	1133220	D	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit	1129996..1133220	Shewanella sp. MR-4	4251617
YP_733104.1	CDS	Shewmr4_0967	NC_008321.1	1133302	1134069	R	SMART: extracellular solute-binding protein, family 3; KEGG: son:SO1143 hypothetical protein; extracellular solute-binding protein	complement(1133302..1134069)	Shewanella sp. MR-4	4251618
YP_733105.1	CDS	Shewmr4_0968	NC_008321.1	1134320	1135408	R	PFAM: chemotaxis sensory transducer; KEGG: son:SO1144 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(1134320..1135408)	Shewanella sp. MR-4	4251619
YP_733106.1	CDS	Shewmr4_0969	NC_008321.1	1135997	1137130	D	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: son:SO1148 hypothetical protein; endonuclease/exonuclease/phosphatase	1135997..1137130	Shewanella sp. MR-4	4251620
YP_733107.1	CDS	Shewmr4_0970	NC_008321.1	1137171	1137986	R	KEGG: sdn:Sden_0966 hypothetical protein; hypothetical protein	complement(1137171..1137986)	Shewanella sp. MR-4	4251621
YP_733108.1	CDS	Shewmr4_0971	NC_008321.1	1137983	1138864	R	PFAM: protein of unknown function DUF692; KEGG: sdn:Sden_0967 protein of unknown function DUF692; hypothetical protein	complement(1137983..1138864)	Shewanella sp. MR-4	4251622
YP_733109.1	CDS	Shewmr4_0972	NC_008321.1	1138948	1139400	R	KEGG: sdn:Sden_0968 putative lipoprotein; putative lipoprotein	complement(1138948..1139400)	Shewanella sp. MR-4	4251623
YP_733110.1	CDS	Shewmr4_0973	NC_008321.1	1139869	1141059	D	SMART: PUA domain containing protein; KEGG: son:SO1149 hypothetical SAM-dependent methyltransferase; SAM-dependent methyltransferase	1139869..1141059	Shewanella sp. MR-4	4251624
YP_733111.1	CDS	Shewmr4_0974	NC_008321.1	1141167	1141826	R	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A	complement(1141167..1141826)	Shewanella sp. MR-4	4251625
YP_733112.1	CDS	Shewmr4_0975	NC_008321.1	1142122	1143048	D	PFAM: protein of unknown function DUF808; KEGG: son:SO1151 hypothetical protein; hypothetical protein	1142122..1143048	Shewanella sp. MR-4	4251626
YP_733113.1	CDS	Shewmr4_0976	NC_008321.1	1143142	1144041	D	PFAM: 3'-5' exonuclease; KEGG: son:SO1153 exonuclease, putative; 3'-5' exonuclease	1143142..1144041	Shewanella sp. MR-4	4251627
YP_733114.1	CDS	Shewmr4_0977	NC_008321.1	1144085	1145053	D	KEGG: son:SO1154 hypothetical protein; hypothetical protein	1144085..1145053	Shewanella sp. MR-4	4251628
YP_733115.1	CDS	Shewmr4_0978	NC_008321.1	1145578	1145883	D	KEGG: son:SO1155 hypothetical protein; hypothetical protein	1145578..1145883	Shewanella sp. MR-4	4251629
YP_733116.1	CDS	Shewmr4_0979	NC_008321.1	1145944	1148118	D	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1156 TonB-dependent receptor; TonB-dependent siderophore receptor	1145944..1148118	Shewanella sp. MR-4	4251630
YP_733117.1	CDS	Shewmr4_0980	NC_008321.1	1148108	1149313	D	KEGG: son:SO1157 hypothetical protein; hypothetical protein	1148108..1149313	Shewanella sp. MR-4	4251631
YP_733118.1	CDS	Shewmr4_0981	NC_008321.1	1149663	1150130	R	PFAM: Ferritin, Dps family protein; KEGG: son:SO1158 Dps family protein; Ferritin, Dps family protein	complement(1149663..1150130)	Shewanella sp. MR-4	4251632
YP_733119.1	CDS	Shewmr4_0982	NC_008321.1	1150359	1150709	D	KEGG: son:SO1159 hypothetical protein; hypothetical protein	1150359..1150709	Shewanella sp. MR-4	4251633
YP_733120.1	CDS	Shewmr4_0983	NC_008321.1	1150807	1151259	D	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1160 ribosomal-protein-alanine acetyltransferase; SSU ribosomal protein S18P alanine acetyltransferase	1150807..1151259	Shewanella sp. MR-4	4251021
YP_733121.1	CDS	Shewmr4_0984	NC_008321.1	1151328	1152293	R	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase	complement(1151328..1152293)	Shewanella sp. MR-4	4251022
YP_733122.1	CDS	lipB	NC_008321.1	1152290	1152943	R	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B	complement(1152290..1152943)	Shewanella sp. MR-4	4251023
YP_733123.1	CDS	Shewmr4_0986	NC_008321.1	1153036	1153302	R	PFAM: protein of unknown function DUF493; KEGG: son:SO1163 hypothetical protein; hypothetical protein	complement(1153036..1153302)	Shewanella sp. MR-4	4251024
YP_733124.1	CDS	Shewmr4_0987	NC_008321.1	1153424	1154599	R	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; penicillin-binding protein 6	complement(1153424..1154599)	Shewanella sp. MR-4	4251025
YP_733125.1	CDS	Shewmr4_0988	NC_008321.1	1154744	1155586	R	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: son:SO1165 rare lipoprotein A; rare lipoprotein A	complement(1154744..1155586)	Shewanella sp. MR-4	4251026
YP_733126.1	CDS	Shewmr4_0989	NC_008321.1	1155570	1156634	R	TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative; lytic murein transglycosylase B	complement(1155570..1156634)	Shewanella sp. MR-4	4251027
YP_733127.1	CDS	Shewmr4_0990	NC_008321.1	1156652	1157755	R	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: son:SO1167 rod shape-determining protein RodA; rod shape-determining protein RodA	complement(1156652..1157755)	Shewanella sp. MR-4	4251028
YP_733128.1	CDS	Shewmr4_0991	NC_008321.1	1157752	1159608	R	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: son:SO1168 penicillin-binding protein 2; peptidoglycan glycosyltransferase	complement(1157752..1159608)	Shewanella sp. MR-4	4251029
YP_733129.1	CDS	Shewmr4_0992	NC_008321.1	1159669	1160139	R	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase	complement(1159669..1160139)	Shewanella sp. MR-4	4251030
YP_733130.1	CDS	Shewmr4_0993	NC_008321.1	1160139	1160483	R	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: son:SO1170 iojap domain protein; iojap-like protein	complement(1160139..1160483)	Shewanella sp. MR-4	4251031
YP_733131.1	CDS	Shewmr4_0994	NC_008321.1	1160586	1161224	R	KEGG: son:SO1171 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate-nucleotide adenylyltransferase	complement(1160586..1161224)	Shewanella sp. MR-4	4251032
YP_733132.1	CDS	Shewmr4_0995	NC_008321.1	1161237	1162268	R	KEGG: son:SO1172 DNA polymerase III delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta	complement(1161237..1162268)	Shewanella sp. MR-4	4251033
YP_733133.1	CDS	Shewmr4_0996	NC_008321.1	1162321	1162815	R	PFAM: Rare lipoprotein B; KEGG: son:SO1173 rare lipoprotein B; rare lipoprotein B	complement(1162321..1162815)	Shewanella sp. MR-4	4251034
YP_733134.1	CDS	leuS	NC_008321.1	1162875	1165454	R	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase	complement(1162875..1165454)	Shewanella sp. MR-4	4251035
YP_733135.1	CDS	Shewmr4_0998	NC_008321.1	1165576	1166076	D	PFAM: protein of unknown function DUF1451; KEGG: son:SO1175 hypothetical protein; hypothetical protein	1165576..1166076	Shewanella sp. MR-4	4251036
YP_733136.1	CDS	Shewmr4_0999	NC_008321.1	1166138	1166632	R	PFAM: methylation site containing protein; KEGG: son:SO1176 hypothetical protein; methylation site containing protein	complement(1166138..1166632)	Shewanella sp. MR-4	4251037
YP_733137.1	CDS	lnt	NC_008321.1	1166648	1168198	R	Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase	complement(1166648..1168198)	Shewanella sp. MR-4	4251038
YP_733138.1	CDS	Shewmr4_1001	NC_008321.1	1168241	1169116	R	PFAM: CBS domain containing protein; transporter-associated region; KEGG: son:SO1178 magnesium and cobalt efflux protein CorC; CBS domain-containing protein	complement(1168241..1169116)	Shewanella sp. MR-4	4251039
YP_733139.1	CDS	Shewmr4_1002	NC_008321.1	1169156	1169617	R	PFAM: protein of unknown function UPF0054; KEGG: son:SO1179 conserved hypothetical protein TIGR00043; putative metalloprotease	complement(1169156..1169617)	Shewanella sp. MR-4	4251040
YP_733140.1	CDS	Shewmr4_1003	NC_008321.1	1169607	1170671	R	PFAM: PhoH family protein; KEGG: son:SO1180 PhoH family protein; PhoH family protein	complement(1169607..1170671)	Shewanella sp. MR-4	4251041
YP_733141.1	CDS	Shewmr4_1004	NC_008321.1	1170935	1172359	R	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase	complement(1170935..1172359)	Shewanella sp. MR-4	4251042
YP_733142.1	CDS	Shewmr4_1005	NC_008321.1	1172499	1172831	R	KEGG: son:SO1182 hypothetical protein; hypothetical protein	complement(1172499..1172831)	Shewanella sp. MR-4	4251043
YP_733143.1	CDS	Shewmr4_1006	NC_008321.1	1173177	1174403	D	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO1183 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	1173177..1174403	Shewanella sp. MR-4	4251044
YP_733144.1	CDS	Shewmr4_1007	NC_008321.1	1174571	1175158	D	Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase	1174571..1175158	Shewanella sp. MR-4	4251045
YP_733145.1	CDS	Shewmr4_1008	NC_008321.1	1175299	1176390	D	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD	1175299..1176390	Shewanella sp. MR-4	4251046
YP_733146.1	CDS	Shewmr4_1009	NC_008321.1	1177671	1178306	R	KEGG: son:SO1187 hypothetical protein; hypothetical protein	complement(1177671..1178306)	Shewanella sp. MR-4	4251047
YP_733147.1	CDS	Shewmr4_1010	NC_008321.1	1178775	1179308	D	KEGG: son:SO1188 hypothetical protein; hypothetical protein	1178775..1179308	Shewanella sp. MR-4	4251048
YP_733148.1	CDS	Shewmr4_1011	NC_008321.1	1179322	1179837	D	KEGG: son:SO1189 lysozyme; hypothetical protein	1179322..1179837	Shewanella sp. MR-4	4251049
YP_733149.1	CDS	Shewmr4_1012	NC_008321.1	1179867	1180685	D	KEGG: son:SO1190 hypothetical protein; hypothetical protein	1179867..1180685	Shewanella sp. MR-4	4251050
YP_733150.1	CDS	Shewmr4_1013	NC_008321.1	1180932	1181408	D	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO1191 transcription elongation factor GreA; transcription elongation factor GreA	1180932..1181408	Shewanella sp. MR-4	4251051
YP_733151.1	CDS	Shewmr4_1014	NC_008321.1	1181707	1182234	D	KEGG: son:SO1192 hypothetical protein; hypothetical protein	1181707..1182234	Shewanella sp. MR-4	4251052
YP_733152.1	CDS	secD	NC_008321.1	1182612	1184486	D	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD	1182612..1184486	Shewanella sp. MR-4	4251053
YP_733153.1	CDS	secF	NC_008321.1	1184489	1185373	D	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF	1184489..1185373	Shewanella sp. MR-4	4251054
YP_733154.1	CDS	Shewmr4_1017	NC_008321.1	1185431	1185730	R	PFAM: protein of unknown function UPF0044; KEGG: son:SO1195 putative RNA-binding protein containing KH domain; hypothetical protein	complement(1185431..1185730)	Shewanella sp. MR-4	4251055
YP_733155.1	CDS	rrmJ	NC_008321.1	1185821	1186450	D	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J	1185821..1186450	Shewanella sp. MR-4	4251091
YP_733156.1	CDS	Shewmr4_1019	NC_008321.1	1186480	1188453	D	KEGG: son:SO1197 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; membrane protease FtsH catalytic subunit	1186480..1188453	Shewanella sp. MR-4	4251092
YP_733157.1	CDS	Shewmr4_1020	NC_008321.1	1188612	1189445	D	KEGG: son:SO1198 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase	1188612..1189445	Shewanella sp. MR-4	4251093
YP_733158.1	CDS	glmM	NC_008321.1	1189520	1190857	D	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase	1189520..1190857	Shewanella sp. MR-4	4251094
YP_733159.1	CDS	Shewmr4_1022	NC_008321.1	1191051	1191833	D	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase	1191051..1191833	Shewanella sp. MR-4	4251095
YP_733160.1	CDS	secG	NC_008321.1	1191835	1192167	D	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: son:SO1201 preprotein translocase, SecG subunit; preprotein translocase subunit SecG	1191835..1192167	Shewanella sp. MR-4	4251096
YP_733161.1	CDS	Shewmr4_1024	NC_008321.1	1192594	1193049	D	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein	1192594..1193049	Shewanella sp. MR-4	4251097
YP_733162.1	CDS	nusA	NC_008321.1	1193079	1194578	D	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA	1193079..1194578	Shewanella sp. MR-4	4251098
YP_733163.1	CDS	infB	NC_008321.1	1194604	1197261	D	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2	1194604..1197261	Shewanella sp. MR-4	4251099
YP_733164.1	CDS	rbfA	NC_008321.1	1197324	1197764	D	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A	1197324..1197764	Shewanella sp. MR-4	4251100
YP_733165.1	CDS	truB	NC_008321.1	1197764	1198717	D	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B	1197764..1198717	Shewanella sp. MR-4	4251101
YP_733166.1	CDS	rpsO	NC_008321.1	1198843	1199112	D	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15	1198843..1199112	Shewanella sp. MR-4	4251102
YP_733167.1	CDS	Shewmr4_1030	NC_008321.1	1199200	1201254	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO1208 GGDEF domain protein; diguanylate cyclase/phosphodiesterase	complement(1199200..1201254)	Shewanella sp. MR-4	4251103
YP_733168.1	CDS	Shewmr4_1031	NC_008321.1	1201448	1203547	D	KEGG: son:SO1209 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase	1201448..1203547	Shewanella sp. MR-4	4251104
YP_733169.1	CDS	Shewmr4_1032	NC_008321.1	1203739	1204641	D	lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI	1203739..1204641	Shewanella sp. MR-4	4251105
YP_733170.1	CDS	prfC	NC_008321.1	1204741	1206321	D	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3	1204741..1206321	Shewanella sp. MR-4	4251106
YP_733171.1	CDS	Shewmr4_1034	NC_008321.1	1206582	1207349	D	PFAM: TatD-related deoxyribonuclease; KEGG: son:SO1213 hydrolase, TatD family; TatD-related deoxyribonuclease	1206582..1207349	Shewanella sp. MR-4	4251107
YP_733172.1	CDS	Shewmr4_1035	NC_008321.1	1207526	1208785	D	TIGRFAM: nucleoside transporter; PFAM: Na dependent nucleoside transporter; nucleoside recognition domain protein; Na dependent nucleoside transporter domain protein; KEGG: son:SO1214 NupC family protein; nucleoside transporter	1207526..1208785	Shewanella sp. MR-4	4251108
YP_733173.1	CDS	Shewmr4_1036	NC_008321.1	1209134	1209973	D	PFAM: nucleoside-specific channel-forming protein, Tsx; KEGG: son:SO1215 outer membrane protein OmpK, putative; nucleoside-specific channel-forming protein, Tsx	1209134..1209973	Shewanella sp. MR-4	4251109
YP_733174.1	CDS	Shewmr4_1037	NC_008321.1	1210386	1211156	D	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase	1210386..1211156	Shewanella sp. MR-4	4251110
YP_733175.1	CDS	deoA	NC_008321.1	1211341	1212672	D	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase	1211341..1212672	Shewanella sp. MR-4	4251111
YP_733176.1	CDS	Shewmr4_1039	NC_008321.1	1212682	1213896	D	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase	1212682..1213896	Shewanella sp. MR-4	4251112
YP_733177.1	CDS	deoD	NC_008321.1	1213988	1214698	D	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase	1213988..1214698	Shewanella sp. MR-4	4251113
YP_733178.1	CDS	Shewmr4_1041	NC_008321.1	1214865	1216085	R	KEGG: son:SO1222 membrane protein; membrane protein	complement(1214865..1216085)	Shewanella sp. MR-4	4251114
YP_733179.1	CDS	Shewmr4_1042	NC_008321.1	1216165	1217157	D	KEGG: son:SO1223 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase	1216165..1217157	Shewanella sp. MR-4	4251115
YP_733180.1	CDS	Shewmr4_1043	NC_008321.1	1217240	1218241	D	PFAM: alpha/beta hydrolase fold; KEGG: son:SO1224 hypothetical protein; alpha/beta hydrolase fold domain-containing protein	1217240..1218241	Shewanella sp. MR-4	4251116
YP_733181.1	CDS	Shewmr4_1044	NC_008321.1	1218258	1220630	R	PFAM: type IV pilus assembly PilZ; KEGG: son:SO1225 hypothetical protein; type IV pilus assembly PilZ	complement(1218258..1220630)	Shewanella sp. MR-4	4251117
YP_733182.1	CDS	Shewmr4_1045	NC_008321.1	1220732	1222096	D	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA	1220732..1222096	Shewanella sp. MR-4	4251118
YP_733183.1	CDS	Shewmr4_1046	NC_008321.1	1222180	1222572	R	PFAM: type IV pilus assembly PilZ; KEGG: son:SO1227 hypothetical protein; type IV pilus assembly PilZ	complement(1222180..1222572)	Shewanella sp. MR-4	4251119
YP_733184.1	CDS	Shewmr4_1047	NC_008321.1	1222752	1223462	D	response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes; DNA-binding transcriptional regulator TorR	1222752..1223462	Shewanella sp. MR-4	4251120
YP_733185.1	CDS	Shewmr4_1048	NC_008321.1	1223481	1224548	R	periplasmic sensory protein associated with the TorRS two-component regulatory system; TMAO reductase system periplasmic protein TorT	complement(1223481..1224548)	Shewanella sp. MR-4	4251121
YP_733186.1	CDS	Shewmr4_1049	NC_008321.1	1224605	1227658	D	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: son:SO1230 sensor histidine kinase/response regulator TorS; multi-sensor hybrid histidine kinase	1224605..1227658	Shewanella sp. MR-4	4251122
YP_733187.1	CDS	torD	NC_008321.1	1227946	1228575	R	TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; chaperone protein TorD	complement(1227946..1228575)	Shewanella sp. MR-4	4251123
YP_733188.1	CDS	Shewmr4_1051	NC_008321.1	1228643	1231132	R	TIGRFAM: Twin-arginine translocation pathway signal; trimethylamine-N-oxide reductase TorA; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: son:SO1232 trimethylamine-N-oxide reductase; trimethylamine-N-oxide reductase TorA	complement(1228643..1231132)	Shewanella sp. MR-4	4251124
YP_733189.1	CDS	Shewmr4_1052	NC_008321.1	1231148	1232326	R	TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: son:SO1233 tetraheme cytochrome c; trimethylamine-N-oxide reductase c-type cytochrome TorC	complement(1231148..1232326)	Shewanella sp. MR-4	4251125
YP_733190.1	CDS	Shewmr4_1053	NC_008321.1	1232353	1232523	R	PFAM: periplasmic nitrate reductase NapE; KEGG: son:SO1234 warning TorE protein; periplasmic nitrate reductase NapE	complement(1232353..1232523)	Shewanella sp. MR-4	4250758
YP_733191.1	CDS	Shewmr4_1054	NC_008321.1	1233041	1234393	D	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO1236 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease	1233041..1234393	Shewanella sp. MR-4	4250759
YP_733192.1	CDS	Shewmr4_1055	NC_008321.1	1234431	1234862	R	PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative; CBS domain-containing protein	complement(1234431..1234862)	Shewanella sp. MR-4	4250760
YP_733193.1	CDS	Shewmr4_1056	NC_008321.1	1234964	1236853	R	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO1238 acyltransferase family protein; phospholipid/glycerol acyltransferase	complement(1234964..1236853)	Shewanella sp. MR-4	4250761
YP_733194.1	CDS	Shewmr4_1057	NC_008321.1	1236856	1237938	R	PFAM: metallophosphoesterase; KEGG: son:SO1239 hypothetical protein; metallophosphoesterase	complement(1236856..1237938)	Shewanella sp. MR-4	4250762
YP_733195.1	CDS	Shewmr4_1058	NC_008321.1	1239748	1241106	R	PFAM: nucleoside recognition domain protein; KEGG: son:SO1245 hypothetical protein; nucleoside recognition domain-containing protein	complement(1239748..1241106)	Shewanella sp. MR-4	4250763
YP_733196.1	CDS	Shewmr4_1059	NC_008321.1	1241810	1242517	D	KEGG: son:SO1247 hypothetical protein; hypothetical protein	1241810..1242517	Shewanella sp. MR-4	4250764
YP_733197.1	CDS	Shewmr4_1060	NC_008321.1	1242547	1243416	R	PFAM: peptidase U32; KEGG: son:SO1248 hypothetical peptidase; peptidase U32	complement(1242547..1243416)	Shewanella sp. MR-4	4250765
YP_733198.1	CDS	Shewmr4_1061	NC_008321.1	1243447	1244448	R	PFAM: peptidase U32; KEGG: son:SO1249 peptidase, U32 family; peptidase U32	complement(1243447..1244448)	Shewanella sp. MR-4	4250766
YP_733199.1	CDS	Shewmr4_1062	NC_008321.1	1244587	1245123	D	PFAM: Sterol-binding domain protein; KEGG: son:SO1250 hypothetical protein; sterol-binding domain-containing protein	1244587..1245123	Shewanella sp. MR-4	4250767
YP_733200.1	CDS	Shewmr4_1063	NC_008321.1	1245209	1245460	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1251 ferredoxin, 4Fe-4S; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	complement(1245209..1245460)	Shewanella sp. MR-4	4250768
YP_733201.1	CDS	Shewmr4_1064	NC_008321.1	1245464	1246828	R	PFAM: peptidase U32; KEGG: son:SO1252 peptidase, U32 family; peptidase U32	complement(1245464..1246828)	Shewanella sp. MR-4	4250769
YP_733202.1	CDS	Shewmr4_1065	NC_008321.1	1247180	1248019	D	KEGG: son:SO1254 hypothetical protein; putative signal transduction protein	1247180..1248019	Shewanella sp. MR-4	4250770
YP_733203.1	CDS	Shewmr4_1066	NC_008321.1	1248105	1249631	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO1255 cyclic nucleotide phosphodiesterase, putative; diguanylate cyclase/phosphodiesterase	1248105..1249631	Shewanella sp. MR-4	4250771
YP_733204.1	CDS	Shewmr4_1067	NC_008321.1	1249620	1250033	R	PFAM: thioesterase superfamily protein; KEGG: son:SO1256 hypothetical 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein	complement(1249620..1250033)	Shewanella sp. MR-4	4250772
YP_733205.1	CDS	Shewmr4_1068	NC_008321.1	1250221	1251477	R	PFAM: adenylosuccinate synthetase; KEGG: son:SO1258 adenylosuccinate synthetase, putative; adenylosuccinate synthetase	complement(1250221..1251477)	Shewanella sp. MR-4	4250773
YP_733206.1	CDS	Shewmr4_1069	NC_008321.1	1251594	1252502	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1259 transcriptional regulator, LysR family; LysR family transcriptional regulator	1251594..1252502	Shewanella sp. MR-4	4250774
YP_733207.1	CDS	Shewmr4_1070	NC_008321.1	1252518	1253336	R	SMART: extracellular solute-binding protein, family 3; KEGG: son:SO1260 hypothetical amino acid ABC transporter; extracellular solute-binding protein	complement(1252518..1253336)	Shewanella sp. MR-4	4250775
YP_733208.1	CDS	Shewmr4_1071	NC_008321.1	1253540	1253968	D	PFAM: OsmC family protein; KEGG: son:SO3495 hypothetical protein; OsmC family protein	1253540..1253968	Shewanella sp. MR-4	4250776
YP_733209.1	CDS	Shewmr4_1072	NC_008321.1	1254057	1254677	R	PFAM: regulatory protein, TetR; KEGG: son:SO3494 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(1254057..1254677)	Shewanella sp. MR-4	4250777
YP_733210.1	CDS	Shewmr4_1073	NC_008321.1	1255040	1256278	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3493 RND multidrug efflux membrane fusion protein MexE; RND family efflux transporter MFP subunit	1255040..1256278	Shewanella sp. MR-4	4250778
YP_733211.1	CDS	Shewmr4_1074	NC_008321.1	1256292	1259441	D	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: son:SO3492 RND multidrug efflux transporter MexF; hydrophobe/amphiphile efflux-1 (HAE1) family protein	1256292..1259441	Shewanella sp. MR-4	4250779
YP_733212.1	CDS	Shewmr4_1075	NC_008321.1	1259567	1260844	D	KEGG: son:SO3491 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase	1259567..1260844	Shewanella sp. MR-4	4250780
YP_733213.1	CDS	Shewmr4_1076	NC_008321.1	1261114	1261761	D	KEGG: sdn:Sden_0376 hypothetical protein; hypothetical protein	1261114..1261761	Shewanella sp. MR-4	4250781
YP_733214.1	CDS	Shewmr4_1077	NC_008321.1	1261751	1264048	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: sdn:Sden_0375 GGDEF domain; diguanylate cyclase/phosphodiesterase	1261751..1264048	Shewanella sp. MR-4	4250782
YP_733215.1	CDS	Shewmr4_1078	NC_008321.1	1264115	1264993	D	KEGG: sdn:Sden_0374 hypothetical protein; hypothetical protein	1264115..1264993	Shewanella sp. MR-4	4250783
YP_733216.1	CDS	Shewmr4_1079	NC_008321.1	1264990	1265481	D	PFAM: globin; KEGG: sdn:Sden_0373 globin; globin	1264990..1265481	Shewanella sp. MR-4	4250784
YP_733217.1	CDS	Shewmr4_1080	NC_008321.1	1265538	1266092	R	PFAM: protein of unknown function DUF88; KEGG: son:SO3490 hypothetical protein; hypothetical protein	complement(1265538..1266092)	Shewanella sp. MR-4	4250785
YP_733218.1	CDS	Shewmr4_1081	NC_008321.1	1266160	1266927	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO3488 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator	complement(1266160..1266927)	Shewanella sp. MR-4	4250786
YP_733219.1	CDS	Shewmr4_1082	NC_008321.1	1267072	1268259	D	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3485 drug resistance transporter, Bcr/CflA family protein; Bcr/CflA subfamily drug resistance transporter	1267072..1268259	Shewanella sp. MR-4	4250787
YP_733220.1	CDS	Shewmr4_1083	NC_008321.1	1268342	1271497	R	PFAM: acriflavin resistance protein; KEGG: son:SO3484 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(1268342..1271497)	Shewanella sp. MR-4	4250788
YP_733221.1	CDS	Shewmr4_1084	NC_008321.1	1271497	1272609	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3483 HlyD family secretion protein; RND family efflux transporter MFP subunit	complement(1271497..1272609)	Shewanella sp. MR-4	4250789
YP_733222.1	CDS	Shewmr4_1085	NC_008321.1	1272809	1273603	R	KEGG: son:SO3481 hypothetical protein; hypothetical protein	complement(1272809..1273603)	Shewanella sp. MR-4	4250790
YP_733223.1	CDS	Shewmr4_1086	NC_008321.1	1273851	1275017	R	PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: son:SO3480 hypothetical protein phosphatase; metallophosphoesterase	complement(1273851..1275017)	Shewanella sp. MR-4	4250791
YP_733224.1	CDS	Shewmr4_1087	NC_008321.1	1275549	1279220	D	KEGG: sdn:Sden_2716 type IV pilin biogenesis protein, putative; type IV pilin biogenesis protein	1275549..1279220	Shewanella sp. MR-4	4250792
YP_733225.1	CDS	Shewmr4_1088	NC_008321.1	1279243	1279578	D	KEGG: son:SO3476 hypothetical protein; hypothetical protein	1279243..1279578	Shewanella sp. MR-4	4251056
YP_733226.1	CDS	Shewmr4_1089	NC_008321.1	1279707	1280360	R	KEGG: son:SO3475 putative protein-disulfide isomerase; putative protein-disulfide isomerase	complement(1279707..1280360)	Shewanella sp. MR-4	4251057
YP_733227.1	CDS	Shewmr4_1090	NC_008321.1	1280462	1281361	R	PFAM: beta-lactamase domain protein; KEGG: son:SO3474 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein	complement(1280462..1281361)	Shewanella sp. MR-4	4251058
YP_733228.1	CDS	Shewmr4_1091	NC_008321.1	1281551	1282474	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3473 transcriptional regulator, LysR family; LysR family transcriptional regulator	1281551..1282474	Shewanella sp. MR-4	4251059
YP_733229.1	CDS	Shewmr4_1092	NC_008321.1	1282734	1283741	D	PFAM: conserved hypothetical protein 341; KEGG: rpd:RPD_2005 conserved hypothetical protein 341; hypothetical protein	1282734..1283741	Shewanella sp. MR-4	4251060
YP_733230.1	CDS	Shewmr4_1093	NC_008321.1	1283818	1285485	R	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein	complement(1283818..1285485)	Shewanella sp. MR-4	4251061
YP_733231.1	CDS	glyA	NC_008321.1	1285675	1286928	D	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase	1285675..1286928	Shewanella sp. MR-4	4251062
YP_733232.1	CDS	nrdR	NC_008321.1	1287139	1287588	D	TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone domain protein; KEGG: son:SO3470 ATP-cone domain protein; transcriptional regulator NrdR	1287139..1287588	Shewanella sp. MR-4	4251063
YP_733233.1	CDS	Shewmr4_1096	NC_008321.1	1287676	1288821	D	KEGG: son:SO3469 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase	1287676..1288821	Shewanella sp. MR-4	4251064
YP_733234.1	CDS	Shewmr4_1097	NC_008321.1	1288829	1289485	D	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha	1288829..1289485	Shewanella sp. MR-4	4251065
YP_733235.1	CDS	Shewmr4_1098	NC_008321.1	1289553	1290656	D	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: son:SO3467 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative; 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II	1289553..1290656	Shewanella sp. MR-4	4251066
YP_733236.1	CDS	ribH	NC_008321.1	1290797	1291273	D	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase	1290797..1291273	Shewanella sp. MR-4	4251067
YP_733237.1	CDS	nusB	NC_008321.1	1291288	1291692	D	Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB	1291288..1291692	Shewanella sp. MR-4	4251068
YP_733238.1	CDS	Shewmr4_1101	NC_008321.1	1291771	1292727	D	KEGG: son:SO3464 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase	1291771..1292727	Shewanella sp. MR-4	4251069
YP_733239.1	CDS	Shewmr4_1102	NC_008321.1	1292727	1293221	D	PFAM: phosphatidylglycerophosphatase A; KEGG: son:SO3463 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase	1292727..1293221	Shewanella sp. MR-4	4251070
YP_733240.1	CDS	Shewmr4_1103	NC_008321.1	1293319	1294194	R	PFAM: UspA domain protein; KEGG: ilo:IL1305 UspA-related nucleotide-binding protein; UspA domain-containing protein	complement(1293319..1294194)	Shewanella sp. MR-4	4251071
YP_733241.1	CDS	Shewmr4_1104	NC_008321.1	1294585	1296243	R	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: son:SO3462 DNA repair protein RecN; recombination and repair protein	complement(1294585..1296243)	Shewanella sp. MR-4	4251072
YP_733242.1	CDS	Shewmr4_1105	NC_008321.1	1296373	1297335	R	PFAM: Auxin Efflux Carrier; KEGG: son:SO3461 transporter, putative; auxin efflux carrier	complement(1296373..1297335)	Shewanella sp. MR-4	4251073
YP_733243.1	CDS	Shewmr4_1106	NC_008321.1	1297610	1298509	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3460 transcriptional regulator, LysR family; LysR family transcriptional regulator	1297610..1298509	Shewanella sp. MR-4	4251074
YP_733244.1	CDS	Shewmr4_1107	NC_008321.1	1298515	1298748	R	KEGG: son:SO3459 hypothetical protein; hypothetical protein	complement(1298515..1298748)	Shewanella sp. MR-4	4251075
YP_733245.1	CDS	Shewmr4_1108	NC_008321.1	1298845	1299444	R	PFAM: protein of unknown function DUF416; KEGG: son:SO3458 hypothetical protein; hypothetical protein	complement(1298845..1299444)	Shewanella sp. MR-4	4251076
YP_733246.1	CDS	Shewmr4_1109	NC_008321.1	1299419	1302226	R	part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA	complement(1299419..1302226)	Shewanella sp. MR-4	4251077
YP_733247.1	CDS	rumA	NC_008321.1	1302286	1303677	D	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase	1302286..1303677	Shewanella sp. MR-4	4251078
YP_733248.1	CDS	Shewmr4_1111	NC_008321.1	1303867	1306074	D	KEGG: son:SO3455 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I, SpoT/RelA	1303867..1306074	Shewanella sp. MR-4	4251079
YP_733249.1	CDS	Shewmr4_1112	NC_008321.1	1306437	1306895	R	hypothetical protein	complement(1306437..1306895)	Shewanella sp. MR-4	4251080
YP_733250.1	CDS	mazG	NC_008321.1	1307669	1308547	D	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase	1307669..1308547	Shewanella sp. MR-4	4251081
YP_733251.1	CDS	pyrG	NC_008321.1	1308664	1310304	D	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase	1308664..1310304	Shewanella sp. MR-4	4251082
YP_733252.1	CDS	eno	NC_008321.1	1310518	1311813	D	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase	1310518..1311813	Shewanella sp. MR-4	4251083
YP_733253.1	CDS	Shewmr4_1116	NC_008321.1	1311914	1312213	D	PFAM: Septum formation initiator; KEGG: son:SO3439 cell division protein FtsB; cell division protein FtsB	1311914..1312213	Shewanella sp. MR-4	4251084
YP_733254.1	CDS	ispD	NC_008321.1	1312224	1312973	D	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	1312224..1312973	Shewanella sp. MR-4	4251085
YP_733255.1	CDS	ispF	NC_008321.1	1313025	1313504	D	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	1313025..1313504	Shewanella sp. MR-4	4251086
YP_733256.1	CDS	Shewmr4_1119	NC_008321.1	1313534	1314661	D	PFAM: tRNA pseudouridine synthase D, TruD; KEGG: son:SO3436 tRNA pseudouridine synthase D; pseudouridylate synthase	1313534..1314661	Shewanella sp. MR-4	4251087
YP_733257.1	CDS	surE	NC_008321.1	1314658	1315407	D	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE	1314658..1315407	Shewanella sp. MR-4	4251088
YP_733258.1	CDS	Shewmr4_1121	NC_008321.1	1315404	1316039	D	KEGG: son:SO3434 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase	1315404..1316039	Shewanella sp. MR-4	4251089
YP_733259.1	CDS	Shewmr4_1122	NC_008321.1	1316137	1317033	D	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: son:SO3433 lipoprotein NlpD; peptidase M23B	1316137..1317033	Shewanella sp. MR-4	4251090
YP_733260.1	CDS	Shewmr4_1123	NC_008321.1	1317114	1318094	D	TIGRFAM: RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: son:SO3432 RNA polymerase sigma-38 factor; RNA polymerase, sigma 28 subunit	1317114..1318094	Shewanella sp. MR-4	4251791
YP_733261.1	CDS	Shewmr4_1124	NC_008321.1	1318235	1320820	R	This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS	complement(1318235..1320820)	Shewanella sp. MR-4	4251792
YP_733262.1	CDS	recA	NC_008321.1	1321203	1322276	D	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A	1321203..1322276	Shewanella sp. MR-4	4251793
YP_733263.1	CDS	Shewmr4_1126	NC_008321.1	1322390	1322761	D	PFAM: regulatory protein RecX; KEGG: son:SO3429 regulatory protein RecX; regulatory protein RecX	1322390..1322761	Shewanella sp. MR-4	4251794
YP_733264.1	CDS	alaS	NC_008321.1	1323037	1325661	D	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase	1323037..1325661	Shewanella sp. MR-4	4251795
YP_733265.1	CDS	Shewmr4_1128	NC_008321.1	1325671	1326927	D	KEGG: son:SO3427 aspartokinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase	1325671..1326927	Shewanella sp. MR-4	4251796
YP_733266.1	CDS	Shewmr4_1129	NC_008321.1	1327046	1327243	D	affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator	1327046..1327243	Shewanella sp. MR-4	4251797
YP_733267.1	CDS	valS	NC_008321.1	1328854	1331730	R	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase	complement(1328854..1331730)	Shewanella sp. MR-4	4251798
YP_733268.1	CDS	Shewmr4_1131	NC_008321.1	1331746	1332210	R	PFAM: DNA polymerase III chi subunit, HolC; KEGG: son:SO3423 DNA polymerase III, chi subunit; DNA polymerase III chi subunit, HolC	complement(1331746..1332210)	Shewanella sp. MR-4	4251799
YP_733269.1	CDS	Shewmr4_1132	NC_008321.1	1333353	1333709	R	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3422 ribosomal subunit interface protein; sigma 54 modulation protein / SSU ribosomal protein S30P	complement(1333353..1333709)	Shewanella sp. MR-4	4251800
YP_733270.1	CDS	Shewmr4_1133	NC_008321.1	1334007	1334696	D	PFAM: cytochrome B561; KEGG: son:SO3421 b-type cytochrome, putative; cytochrome B561	1334007..1334696	Shewanella sp. MR-4	4251801
YP_733271.1	CDS	Shewmr4_1134	NC_008321.1	1334762	1335211	R	PFAM: cytochrome c, class II; KEGG: son:SO3420 cytochrome c'; cytochrome c, class II	complement(1334762..1335211)	Shewanella sp. MR-4	4251802
YP_733272.1	CDS	Shewmr4_1135	NC_008321.1	1335401	1335676	D	TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: son:SO3419 trp operon repressor; Trp operon repressor	1335401..1335676	Shewanella sp. MR-4	4251803
YP_733273.1	CDS	Shewmr4_1136	NC_008321.1	1335707	1336084	R	KEGG: son:SO3418 hypothetical protein; hypothetical protein	complement(1335707..1336084)	Shewanella sp. MR-4	4251804
YP_733274.1	CDS	Shewmr4_1137	NC_008321.1	1336277	1336939	R	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO3417 peptidyl-prolyl cis-trans isomerase SlyD; peptidylprolyl isomerase, FKBP-type	complement(1336277..1336939)	Shewanella sp. MR-4	4251805
YP_733275.1	CDS	thrA	NC_008321.1	1337582	1340050	D	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I	1337582..1340050	Shewanella sp. MR-4	4251806
YP_733276.1	CDS	Shewmr4_1139	NC_008321.1	1340047	1340985	D	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase	1340047..1340985	Shewanella sp. MR-4	4251807
YP_733277.1	CDS	Shewmr4_1140	NC_008321.1	1341051	1342334	D	catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase	1341051..1342334	Shewanella sp. MR-4	4251808
YP_733278.1	CDS	Shewmr4_1141	NC_008321.1	1342600	1342893	D	hypothetical protein	1342600..1342893	Shewanella sp. MR-4	4251809
YP_733279.1	CDS	Shewmr4_1142	NC_008321.1	1343063	1343941	D	PFAM: extracellular solute-binding protein, family 3; KEGG: son:SO3412 extracellular solute-binding proteins, family 3 protein; extracellular solute-binding protein	1343063..1343941	Shewanella sp. MR-4	4251810
YP_733280.1	CDS	Shewmr4_1143	NC_008321.1	1344148	1347429	D	PFAM: peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: son:SO3411 protease, putative; peptidase S41	1344148..1347429	Shewanella sp. MR-4	4251811
YP_733281.1	CDS	Shewmr4_1144	NC_008321.1	1347536	1347958	R	KEGG: son:SO3410 hypothetical protein; hypothetical protein	complement(1347536..1347958)	Shewanella sp. MR-4	4251812
YP_733282.1	CDS	Shewmr4_1145	NC_008321.1	1348088	1348525	R	PFAM: OsmC family protein; KEGG: son:SO3409 OsmC/Ohr family protein; OsmC family protein	complement(1348088..1348525)	Shewanella sp. MR-4	4251813
YP_733283.1	CDS	Shewmr4_1146	NC_008321.1	1348625	1348975	R	KEGG: son:SO3408 hypothetical protein; hypothetical protein	complement(1348625..1348975)	Shewanella sp. MR-4	4251814
YP_733284.1	CDS	Shewmr4_1147	NC_008321.1	1348972	1350654	R	PFAM: PepSY-associated TM helix domain protein; KEGG: son:SO3407 hypothetical protein; PepSY-associated TM helix domain-containing protein	complement(1348972..1350654)	Shewanella sp. MR-4	4251815
YP_733285.1	CDS	Shewmr4_1148	NC_008321.1	1350656	1351024	R	KEGG: son:SO3406 hypothetical protein; hypothetical protein	complement(1350656..1351024)	Shewanella sp. MR-4	4251816
YP_733286.1	CDS	Shewmr4_1149	NC_008321.1	1351448	1353016	D	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: son:SO3404 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	1351448..1353016	Shewanella sp. MR-4	4251817
YP_733287.1	CDS	Shewmr4_1150	NC_008321.1	1353246	1353602	D	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3403 ribosomal subunit interface protein; sigma 54 modulation protein / SSU ribosomal protein S30P	1353246..1353602	Shewanella sp. MR-4	4251818
YP_733288.1	CDS	Shewmr4_1151	NC_008321.1	1353744	1354421	R	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sdn:Sden_3055 response regulator receiver; two component LuxR family transcriptional regulator	complement(1353744..1354421)	Shewanella sp. MR-4	4251819
YP_733289.1	CDS	Shewmr4_1152	NC_008321.1	1354466	1355626	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sdn:Sden_3054 histidine kinase, dimerisation and phosphoacceptor region; putative signal transduction histidine kinase	complement(1354466..1355626)	Shewanella sp. MR-4	4251820
YP_733290.1	CDS	Shewmr4_1153	NC_008321.1	1355962	1356507	D	PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_2630 isochorismatase family protein; isochorismatase hydrolase	1355962..1356507	Shewanella sp. MR-4	4251821
YP_733291.1	CDS	Shewmr4_1154	NC_008321.1	1356563	1357285	R	PFAM: protein of unknown function DUF28; KEGG: son:SO3401 hypothetical protein; hypothetical protein	complement(1356563..1357285)	Shewanella sp. MR-4	4251822
YP_733292.1	CDS	Shewmr4_1155	NC_008321.1	1357674	1359245	D	PFAM: chemotaxis sensory transducer; KEGG: cps:CPS_4961 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	1357674..1359245	Shewanella sp. MR-4	4251823
YP_733293.1	CDS	Shewmr4_1156	NC_008321.1	1359561	1359785	D	KEGG: son:SO3395 hypothetical protein; hypothetical protein	1359561..1359785	Shewanella sp. MR-4	4251824
YP_733294.1	CDS	Shewmr4_1157	NC_008321.1	1359889	1360470	R	PFAM: regulatory protein, TetR; KEGG: son:SO3393 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(1359889..1360470)	Shewanella sp. MR-4	4251825
YP_733295.1	CDS	Shewmr4_1158	NC_008321.1	1360600	1361667	D	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: son:SO3392 oxidoreductase, FMN-binding; NADH:flavin oxidoreductase/NADH oxidase	1360600..1361667	Shewanella sp. MR-4	4251442
YP_733296.1	CDS	Shewmr4_1159	NC_008321.1	1361735	1364152	R	KEGG: son:SO3391 ATP-dependent protease, putative; ATP-dependent protease	complement(1361735..1364152)	Shewanella sp. MR-4	4251443
YP_733297.1	CDS	Shewmr4_1160	NC_008321.1	1364552	1367188	D	KEGG: son:SO3389 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	1364552..1367188	Shewanella sp. MR-4	4251444
YP_733298.1	CDS	Shewmr4_1161	NC_008321.1	1367338	1368567	D	PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO3388 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	1367338..1368567	Shewanella sp. MR-4	4251445
YP_733299.1	CDS	Shewmr4_1162	NC_008321.1	1368831	1369340	R	KEGG: son:SO3387 hypothetical protein; hypothetical protein	complement(1368831..1369340)	Shewanella sp. MR-4	4251446
YP_733300.1	CDS	Shewmr4_1163	NC_008321.1	1369542	1370495	D	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: son:SO3386 hypothetical protein; hypothetical protein	1369542..1370495	Shewanella sp. MR-4	4251447
YP_733301.1	CDS	Shewmr4_1164	NC_008321.1	1370569	1371654	D	PFAM: regulatory protein, MerR; KEGG: son:SO3385 transcriptional regulator, MerR family; MerR family transcriptional regulator	1370569..1371654	Shewanella sp. MR-4	4251448
YP_733302.1	CDS	Shewmr4_1165	NC_008321.1	1371647	1373128	D	PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: son:SO3384 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase type I	1371647..1373128	Shewanella sp. MR-4	4251449
YP_733303.1	CDS	Shewmr4_1166	NC_008321.1	1373174	1373620	D	KEGG: son:SO3383 transcriptional regulator-related protein; transcriptional regulator-like protein	1373174..1373620	Shewanella sp. MR-4	4251450
YP_733304.1	CDS	Shewmr4_1167	NC_008321.1	1373620	1374420	D	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO3382 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR	1373620..1374420	Shewanella sp. MR-4	4251451
YP_733305.1	CDS	Shewmr4_1168	NC_008321.1	1374417	1375667	D	PFAM: amine oxidase; KEGG: son:SO3381 hypothetical protein; amine oxidase	1374417..1375667	Shewanella sp. MR-4	4251452
YP_733306.1	CDS	Shewmr4_1169	NC_008321.1	1375664	1376455	D	PFAM: protein of unknown function DUF1365; KEGG: son:SO3380 hypothetical protein; hypothetical protein	1375664..1376455	Shewanella sp. MR-4	4251453
YP_733307.1	CDS	Shewmr4_1170	NC_008321.1	1376457	1377713	D	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO3379 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase	1376457..1377713	Shewanella sp. MR-4	4251454
YP_733308.1	CDS	Shewmr4_1171	NC_008321.1	1377726	1378271	D	KEGG: son:SO3378 hypothetical protein; hypothetical protein	1377726..1378271	Shewanella sp. MR-4	4251455
YP_733309.1	CDS	Shewmr4_1172	NC_008321.1	1378326	1378898	D	KEGG: son:SO3377 hypothetical protein; hypothetical protein	1378326..1378898	Shewanella sp. MR-4	4251456
YP_733310.1	CDS	Shewmr4_1173	NC_008321.1	1378886	1379434	D	KEGG: son:SO3376 hypothetical protein; hypothetical protein	1378886..1379434	Shewanella sp. MR-4	4251457
YP_733311.1	CDS	Shewmr4_1174	NC_008321.1	1379499	1379720	D	KEGG: son:SO3374.1 hypothetical protein; hypothetical protein	1379499..1379720	Shewanella sp. MR-4	4251458
YP_733312.1	CDS	Shewmr4_1175	NC_008321.1	1379827	1380171	R	KEGG: son:SO3374 hypothetical protein; hypothetical protein	complement(1379827..1380171)	Shewanella sp. MR-4	4251459
YP_733313.1	CDS	Shewmr4_1176	NC_008321.1	1380325	1380510	D	hypothetical protein	1380325..1380510	Shewanella sp. MR-4	4251460
YP_733314.1	CDS	Shewmr4_1177	NC_008321.1	1381833	1382384	D	PFAM: cytochrome B561; KEGG: son:SO3371 hypothetical cytochrome B561; cytochrome B561	1381833..1382384	Shewanella sp. MR-4	4251461
YP_733315.1	CDS	Shewmr4_1178	NC_008321.1	1382389	1382964	D	PFAM: YceI family protein; KEGG: son:SO3370 hypothetical protein; hypothetical protein	1382389..1382964	Shewanella sp. MR-4	4251462
YP_733316.1	CDS	Shewmr4_1179	NC_008321.1	1383048	1383326	R	PFAM: Fe(II) trafficking protein YggX; KEGG: son:SO3369 hypothetical protein; hypothetical protein	complement(1383048..1383326)	Shewanella sp. MR-4	4251463
YP_733317.1	CDS	Shewmr4_1180	NC_008321.1	1383336	1384454	R	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: son:SO3368 A/G-specific adenine glycosylase; A/G-specific DNA-adenine glycosylase	complement(1383336..1384454)	Shewanella sp. MR-4	4251464
YP_733318.1	CDS	trmB	NC_008321.1	1384634	1385350	D	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase	1384634..1385350	Shewanella sp. MR-4	4251465
YP_733319.1	CDS	Shewmr4_1182	NC_008321.1	1385396	1385722	D	PFAM: protein of unknown function DUF469; KEGG: son:SO3366 hypothetical protein; hypothetical protein	1385396..1385722	Shewanella sp. MR-4	4251466
YP_733320.1	CDS	Shewmr4_1183	NC_008321.1	1385722	1386636	D	catalyzes the formation of glutamate from glutamine; glutaminase	1385722..1386636	Shewanella sp. MR-4	4251467
YP_733321.1	CDS	Shewmr4_1184	NC_008321.1	1386815	1387636	D	KEGG: son:SO3364 hypothetical protein; hypothetical protein	1386815..1387636	Shewanella sp. MR-4	4251468
YP_733322.1	CDS	Shewmr4_1185	NC_008321.1	1388056	1388997	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3363 transcriptional regulator, LysR family; LysR family transcriptional regulator	1388056..1388997	Shewanella sp. MR-4	4251469
YP_733323.1	CDS	Shewmr4_1186	NC_008321.1	1389623	1391470	R	PFAM: protein of unknown function DUF885; KEGG: son:SO3361 hypothetical protein; hypothetical protein	complement(1389623..1391470)	Shewanella sp. MR-4	4251470
YP_733324.1	CDS	Shewmr4_1187	NC_008321.1	1391888	1393045	R	KEGG: son:SO3359 oxygen-independent coproporphyrinogen III oxidase, putative; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase	complement(1391888..1393045)	Shewanella sp. MR-4	4251471
YP_733325.1	CDS	Shewmr4_1188	NC_008321.1	1393045	1393662	R	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase	complement(1393045..1393662)	Shewanella sp. MR-4	4251472
YP_733326.1	CDS	Shewmr4_1189	NC_008321.1	1393823	1394257	R	KEGG: son:SO3357 hypothetical protein; hypothetical protein	complement(1393823..1394257)	Shewanella sp. MR-4	4251473
YP_733327.1	CDS	Shewmr4_1190	NC_008321.1	1394326	1394616	R	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF167; KEGG: son:SO3356 hypothetical protein; hypothetical protein	complement(1394326..1394616)	Shewanella sp. MR-4	4251474
YP_733328.1	CDS	Shewmr4_1191	NC_008321.1	1394616	1395164	R	PFAM: protein of unknown function YGGT; KEGG: son:SO3355 hypothetical protein; hypothetical protein	complement(1394616..1395164)	Shewanella sp. MR-4	4251475
YP_733329.1	CDS	Shewmr4_1192	NC_008321.1	1395240	1396058	R	KEGG: son:SO3354 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase	complement(1395240..1396058)	Shewanella sp. MR-4	4251476
YP_733330.1	CDS	Shewmr4_1193	NC_008321.1	1396283	1396999	R	TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase domain protein; KEGG: son:SO3352 conserved hypothetical protein TIGR00044; hypothetical protein	complement(1396283..1396999)	Shewanella sp. MR-4	4251232
YP_733331.1	CDS	Shewmr4_1194	NC_008321.1	1397035	1398072	D	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: son:SO3351 twitching motility protein PilT; pilus retraction ATPase PilT	1397035..1398072	Shewanella sp. MR-4	4251233
YP_733332.1	CDS	Shewmr4_1195	NC_008321.1	1398082	1399194	D	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: son:SO3350 twitching motility protein PilU; twitching motility protein	1398082..1399194	Shewanella sp. MR-4	4251234
YP_733333.1	CDS	Shewmr4_1196	NC_008321.1	1399293	1399904	D	PFAM: glutathione peroxidase; KEGG: son:SO3349 glutathione peroxidase, putative; glutathione peroxidase	1399293..1399904	Shewanella sp. MR-4	4251235
YP_733334.1	CDS	Shewmr4_1197	NC_008321.1	1399974	1400957	D	KEGG: son:SO3348 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase; ferrochelatase	1399974..1400957	Shewanella sp. MR-4	4251236
YP_733335.1	CDS	Shewmr4_1198	NC_008321.1	1401019	1401444	R	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein	complement(1401019..1401444)	Shewanella sp. MR-4	4251237
YP_733336.1	CDS	Shewmr4_1199	NC_008321.1	1401475	1402038	R	PFAM: protein of unknown function DUF179; KEGG: son:SO3346 putative transcriptional regulator; hypothetical protein	complement(1401475..1402038)	Shewanella sp. MR-4	4251238
YP_733337.1	CDS	Shewmr4_1200	NC_008321.1	1402107	1402436	R	involved in start site selection during the initiation of translation; translation initiation factor Sui1	complement(1402107..1402436)	Shewanella sp. MR-4	4251239
YP_733338.1	CDS	Shewmr4_1201	NC_008321.1	1402586	1402900	R	KEGG: son:SO3344 hypothetical protein; hypothetical protein	complement(1402586..1402900)	Shewanella sp. MR-4	4251240
YP_733339.1	CDS	Shewmr4_1202	NC_008321.1	1403080	1403640	D	KEGG: son:SO3343 hypothetical protein; hypothetical protein	1403080..1403640	Shewanella sp. MR-4	4251241
YP_733340.1	CDS	Shewmr4_1203	NC_008321.1	1403994	1404635	D	PFAM: protein of unknown function UPF0126; KEGG: son:SO3342 hypothetical protein; hypothetical protein	1403994..1404635	Shewanella sp. MR-4	4251242
YP_733341.1	CDS	Shewmr4_1204	NC_008321.1	1404670	1405263	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO3341 antioxidant, AhpC/TSA family; thiol peroxidase (atypical 2-Cys peroxiredoxin)	complement(1404670..1405263)	Shewanella sp. MR-4	4251243
YP_733342.1	CDS	Shewmr4_1205	NC_008321.1	1405375	1406202	R	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO3340 hypothetical small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS	complement(1405375..1406202)	Shewanella sp. MR-4	4251244
YP_733343.1	CDS	Shewmr4_1206	NC_008321.1	1406234	1406809	R	PFAM: OmpA/MotB domain protein; KEGG: son:SO3339 OmpA family protein; OmpA/MotB domain-containing protein	complement(1406234..1406809)	Shewanella sp. MR-4	4251245
YP_733344.1	CDS	Shewmr4_1207	NC_008321.1	1407109	1408122	D	PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO3338 L-allo-threonine aldolase; L-threonine aldolase	1407109..1408122	Shewanella sp. MR-4	4251246
YP_733345.1	CDS	Shewmr4_1208	NC_008321.1	1408286	1409752	D	PFAM: KDPG and KHG aldolase; KEGG: son:SO3337 hypothetical protein; putative signal transduction protein	1408286..1409752	Shewanella sp. MR-4	4251247
YP_733346.1	CDS	Shewmr4_1209	NC_008321.1	1409757	1410296	R	KEGG: son:SO3336 hypothetical protein; hypothetical protein	complement(1409757..1410296)	Shewanella sp. MR-4	4251248
YP_733347.1	CDS	Shewmr4_1210	NC_008321.1	1410348	1411172	R	PFAM: protein of unknown function DUF980; KEGG: son:SO3335 hypothetical protein; hypothetical protein	complement(1410348..1411172)	Shewanella sp. MR-4	4251249
YP_733348.1	CDS	Shewmr4_1211	NC_008321.1	1411270	1413006	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3334 GGDEF family protein; diguanylate cyclase	complement(1411270..1413006)	Shewanella sp. MR-4	4251250
YP_733349.1	CDS	Shewmr4_1212	NC_008321.1	1413003	1414496	R	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO3333 transporter, putative; extracellular solute-binding protein	complement(1413003..1414496)	Shewanella sp. MR-4	4251251
YP_733350.1	CDS	Shewmr4_1213	NC_008321.1	1414631	1415065	R	KEGG: son:SO3332 transcriptional regulator, CopG family; CopG family transcriptional regulator	complement(1414631..1415065)	Shewanella sp. MR-4	4251252
YP_733351.1	CDS	Shewmr4_1214	NC_008321.1	1415025	1415807	R	KEGG: son:SO3331 hypothetical protein; hypothetical protein	complement(1415025..1415807)	Shewanella sp. MR-4	4251253
YP_733352.1	CDS	Shewmr4_1215	NC_008321.1	1416339	1416797	D	KEGG: son:SO3328 acetyltransferase, GNAT family; acetyltransferase	1416339..1416797	Shewanella sp. MR-4	4251254
YP_733353.1	CDS	Shewmr4_1216	NC_008321.1	1417033	1417242	D	KEGG: son:SO3326 hypothetical protein; hypothetical protein	1417033..1417242	Shewanella sp. MR-4	4251255
YP_733354.1	CDS	Shewmr4_1217	NC_008321.1	1417379	1417681	D	KEGG: son:SO3325 NrfJ-related protein; NrfJ-like protein	1417379..1417681	Shewanella sp. MR-4	4251256
YP_733355.1	CDS	Shewmr4_1218	NC_008321.1	1417849	1418370	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3324 acetyltransferase, GNAT family; acetyltransferase	1417849..1418370	Shewanella sp. MR-4	4251257
YP_733356.1	CDS	Shewmr4_1219	NC_008321.1	1418434	1418964	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3323 acetyltransferase, GNAT family; acetyltransferase	1418434..1418964	Shewanella sp. MR-4	4251258
YP_733357.1	CDS	Shewmr4_1220	NC_008321.1	1419062	1419757	R	PFAM: Pirin domain protein domain protein; Cupin 2, conserved barrel domain protein; KEGG: vpa:VPA0042 hypothetical protein; pirin domain-containing protein	complement(1419062..1419757)	Shewanella sp. MR-4	4251259
YP_733358.1	CDS	Shewmr4_1221	NC_008321.1	1419768	1420211	R	PFAM: DoxX family protein; KEGG: son:SO3319 hypothetical protein; DoxX family protein	complement(1419768..1420211)	Shewanella sp. MR-4	4251260
YP_733359.1	CDS	Shewmr4_1222	NC_008321.1	1420376	1421269	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3318 transcriptional regulator, LysR family; LysR family transcriptional regulator	1420376..1421269	Shewanella sp. MR-4	4251261
YP_733360.1	CDS	Shewmr4_1223	NC_008321.1	1421666	1423417	R	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: son:SO3317 5'-nucleotidase, putative; metallophosphoesterase	complement(1421666..1423417)	Shewanella sp. MR-4	4251262
YP_733361.1	CDS	Shewmr4_1224	NC_008321.1	1423515	1424606	R	PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: son:SO3316 hypothetical protein; hypothetical protein	complement(1423515..1424606)	Shewanella sp. MR-4	4251263
YP_733362.1	CDS	Shewmr4_1225	NC_008321.1	1424751	1425872	D	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N	1424751..1425872	Shewanella sp. MR-4	4251264
YP_733363.1	CDS	Shewmr4_1226	NC_008321.1	1425905	1426693	D	KEGG: son:SO3314 fimbrial biogenesis and twitching motility protein, putative; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW	1425905..1426693	Shewanella sp. MR-4	4251265
YP_733364.1	CDS	Shewmr4_1227	NC_008321.1	1426690	1427832	D	KEGG: son:SO3313 hypothetical protein; hypothetical protein	1426690..1427832	Shewanella sp. MR-4	4251266
YP_733365.1	CDS	ispG	NC_008321.1	1427875	1428990	D	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase	1427875..1428990	Shewanella sp. MR-4	4251284
YP_733366.1	CDS	hisS	NC_008321.1	1429150	1430427	D	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase	1429150..1430427	Shewanella sp. MR-4	4251285
YP_733367.1	CDS	Shewmr4_1230	NC_008321.1	1430440	1431060	D	KEGG: son:SO3310 hypothetical protein; hypothetical protein	1430440..1431060	Shewanella sp. MR-4	4251286
YP_733368.1	CDS	Shewmr4_1231	NC_008321.1	1431072	1432259	D	with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL	1431072..1432259	Shewanella sp. MR-4	4251287
YP_733369.1	CDS	engA	NC_008321.1	1432339	1433805	D	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA	1432339..1433805	Shewanella sp. MR-4	4251288
YP_733370.1	CDS	xseA	NC_008321.1	1433953	1435299	R	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit	complement(1433953..1435299)	Shewanella sp. MR-4	4251289
YP_733371.1	CDS	Shewmr4_1234	NC_008321.1	1435422	1436888	D	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase	1435422..1436888	Shewanella sp. MR-4	4251290
YP_733372.1	CDS	guaA	NC_008321.1	1437006	1438583	D	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase	1437006..1438583	Shewanella sp. MR-4	4251291
YP_733373.1	CDS	Shewmr4_1236	NC_008321.1	1438690	1439448	D	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: son:SO3291 cytidine/deoxycytidylate deaminase family protein; CMP/dCMP deaminase, zinc-binding	1438690..1439448	Shewanella sp. MR-4	4251292
YP_733374.1	CDS	Shewmr4_1237	NC_008321.1	1439888	1441324	R	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase	complement(1439888..1441324)	Shewanella sp. MR-4	4251293
YP_733375.1	CDS	Shewmr4_1238	NC_008321.1	1441604	1445485	D	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase	1441604..1445485	Shewanella sp. MR-4	4251294
YP_733376.1	CDS	Shewmr4_1239	NC_008321.1	1446727	1448283	D	PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: son:SO3286 cytochrome bd-I oxidase subunit I; cytochrome bd ubiquinol oxidase subunit I	1446727..1448283	Shewanella sp. MR-4	4251295
YP_733377.1	CDS	Shewmr4_1240	NC_008321.1	1448299	1449438	D	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: son:SO3285 cytochrome bd-I oxidase subunit II; cytochrome d ubiquinol oxidase subunit II	1448299..1449438	Shewanella sp. MR-4	4251296
YP_733378.1	CDS	Shewmr4_1241	NC_008321.1	1449457	1449573	D	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: sdn:Sden_1276 Cyd operon protein YbgT; cyd operon protein YbgT	1449457..1449573	Shewanella sp. MR-4	4251297
YP_733379.1	CDS	Shewmr4_1242	NC_008321.1	1449813	1449965	R	KEGG: bpm:BURPS1710b_2605 serine/arginine repetitive matrix 1; serine/arginine repetitive matrix 1	complement(1449813..1449965)	Shewanella sp. MR-4	4251298
YP_733380.1	CDS	Shewmr4_1243	NC_008321.1	1450124	1452127	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3282 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(1450124..1452127)	Shewanella sp. MR-4	4251299
YP_733381.1	CDS	Shewmr4_1244	NC_008321.1	1452385	1452630	D	PFAM: protein of unknown function DUF465; KEGG: son:SO3280 hypothetical protein; hypothetical protein	1452385..1452630	Shewanella sp. MR-4	4251300
YP_733382.1	CDS	Shewmr4_1245	NC_008321.1	1452615	1455695	R	PFAM: acriflavin resistance protein; KEGG: son:SO3279 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(1452615..1455695)	Shewanella sp. MR-4	4251301
YP_733383.1	CDS	Shewmr4_1246	NC_008321.1	1455698	1456819	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3278 hypothetical protein; RND family efflux transporter MFP subunit	complement(1455698..1456819)	Shewanella sp. MR-4	4251302
YP_733384.1	CDS	Shewmr4_1247	NC_008321.1	1456956	1457576	D	PFAM: regulatory protein, TetR; KEGG: son:SO3277 transcriptional regulator, TetR family; TetR family transcriptional regulator	1456956..1457576	Shewanella sp. MR-4	4251303
YP_733385.1	CDS	Shewmr4_1248	NC_008321.1	1457690	1458631	D	KEGG: son:SO3276 hypothetical protein; hypothetical protein	1457690..1458631	Shewanella sp. MR-4	4251304
YP_733386.1	CDS	Shewmr4_1249	NC_008321.1	1458632	1459192	R	KEGG: son:SO3275 hypothetical protein; hypothetical protein	complement(1458632..1459192)	Shewanella sp. MR-4	4251305
YP_733387.1	CDS	Shewmr4_1250	NC_008321.1	1459427	1459906	R	KEGG: son:SO3274 hypothetical protein; hypothetical protein	complement(1459427..1459906)	Shewanella sp. MR-4	4251306
YP_733388.1	CDS	Shewmr4_1251	NC_008321.1	1460159	1461325	R	KEGG: son:SO3258 hypothetical protein; hypothetical protein	complement(1460159..1461325)	Shewanella sp. MR-4	4251307
YP_733389.1	CDS	Shewmr4_1252	NC_008321.1	1461565	1462197	D	KEGG: son:SO3257 hypothetical protein; hypothetical protein	1461565..1462197	Shewanella sp. MR-4	4251308
YP_733390.1	CDS	Shewmr4_1253	NC_008321.1	1462194	1462643	D	PFAM: protein of unknown function DUF400; KEGG: son:SO3256 hypothetical protein; hypothetical protein	1462194..1462643	Shewanella sp. MR-4	4251309
YP_733391.1	CDS	Shewmr4_1254	NC_008321.1	1462765	1463190	R	PFAM: FlgN family protein; KEGG: son:SO3255 flagellar biosynthetic protein FlgN; FlgN family protein	complement(1462765..1463190)	Shewanella sp. MR-4	4251310
YP_733392.1	CDS	Shewmr4_1255	NC_008321.1	1463193	1463519	R	PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: son:SO3254 negative regulator of flagellin synthesis FlgM; anti-sigma-28 factor, FlgM	complement(1463193..1463519)	Shewanella sp. MR-4	4251311
YP_733393.1	CDS	flgA	NC_008321.1	1463595	1464302	R	required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA	complement(1463595..1464302)	Shewanella sp. MR-4	4251312
YP_733394.1	CDS	Shewmr4_1257	NC_008321.1	1464508	1465428	D	PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO3252 chemotaxis protein CheV; response regulator receiver modulated CheW protein	1464508..1465428	Shewanella sp. MR-4	4251313
YP_733395.1	CDS	Shewmr4_1258	NC_008321.1	1465530	1466369	D	PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 12; KEGG: son:SO3251 chemotaxis protein methyltransferase CheR; MCP methyltransferase, CheR-type	1465530..1466369	Shewanella sp. MR-4	4251314
YP_733396.1	CDS	flgB	NC_008321.1	1466514	1466921	D	with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB	1466514..1466921	Shewanella sp. MR-4	4251315
YP_733397.1	CDS	flgC	NC_008321.1	1466924	1467340	D	with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC	1466924..1467340	Shewanella sp. MR-4	4251316
YP_733398.1	CDS	flgD	NC_008321.1	1467365	1468135	D	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein	1467365..1468135	Shewanella sp. MR-4	4251317
YP_733399.1	CDS	flgE	NC_008321.1	1468198	1469559	D	the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE	1468198..1469559	Shewanella sp. MR-4	4251318
YP_733400.2	CDS	flgF	NC_008321.1	1469732	1470475	D	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF	1469732..1470475	Shewanella sp. MR-4	4251197
YP_733401.1	CDS	flgG	NC_008321.1	1470486	1471274	D	makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG	1470486..1471274	Shewanella sp. MR-4	4251198
YP_733402.1	CDS	flgH	NC_008321.1	1471287	1471961	D	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein	1471287..1471961	Shewanella sp. MR-4	4251199
YP_733403.1	CDS	flgI	NC_008321.1	1471973	1473064	D	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein	1471973..1473064	Shewanella sp. MR-4	4251200
YP_733404.1	CDS	flgJ	NC_008321.1	1473082	1474236	D	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ	1473082..1474236	Shewanella sp. MR-4	4251201
YP_733405.1	CDS	Shewmr4_1268	NC_008321.1	1474277	1476202	D	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_1312 flagellar hook-associated protein; flagellar hook-associated protein FlgK	1474277..1476202	Shewanella sp. MR-4	4251202
YP_733406.1	CDS	flgL	NC_008321.1	1476214	1477422	D	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL	1476214..1477422	Shewanella sp. MR-4	4251203
YP_733407.1	CDS	Shewmr4_1270	NC_008321.1	1477679	1479136	D	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: pae:PA1092 flagellin type B; flagellin domain-containing protein	1477679..1479136	Shewanella sp. MR-4	4251204
YP_733408.1	CDS	Shewmr4_1272	NC_008321.1	1479615	1479965	R	KEGG: ypm:YP1857 transposase; transposase	complement(1479615..1479965)	Shewanella sp. MR-4	4251205
YP_733409.1	CDS	Shewmr4_1273	NC_008321.1	1480198	1481652	D	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: pae:PA1092 flagellin type B; flagellin domain-containing protein	1480198..1481652	Shewanella sp. MR-4	4251206
YP_733410.1	CDS	Shewmr4_1274	NC_008321.1	1481831	1482223	D	PFAM: flagellar protein FlaG protein; KEGG: son:SO3236 flagellin FlaG; flagellar protein FlaG protein	1481831..1482223	Shewanella sp. MR-4	4251207
YP_733411.1	CDS	Shewmr4_1275	NC_008321.1	1482264	1483631	D	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: son:SO3235 flagellar hook-associated protein FliD; flagellar hook-associated 2 domain-containing protein	1482264..1483631	Shewanella sp. MR-4	4251208
YP_733412.1	CDS	Shewmr4_1276	NC_008321.1	1483668	1484021	D	KEGG: son:SO3234 hypothetical protein; hypothetical protein	1483668..1484021	Shewanella sp. MR-4	4251209
YP_733413.1	CDS	fliS	NC_008321.1	1484028	1484429	D	flagellin specific chaperone; flagellar protein FliS	1484028..1484429	Shewanella sp. MR-4	4251210
YP_733414.1	CDS	Shewmr4_1278	NC_008321.1	1484727	1486160	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; KEGG: son:SO3232 flagellar regulatory protein A; sigma-54 dependent trancsriptional regulator	1484727..1486160	Shewanella sp. MR-4	4251211
YP_733415.1	CDS	Shewmr4_1279	NC_008321.1	1486269	1487351	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: son:SO3231 flagellar regulatory protein B; PAS/PAC sensor signal transduction histidine kinase	1486269..1487351	Shewanella sp. MR-4	4251212
YP_733416.1	CDS	Shewmr4_1280	NC_008321.1	1487344	1488684	D	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: son:SO3230 flagellar regulatory protein C; two component, sigma54 specific, Fis family transcriptional regulator	1487344..1488684	Shewanella sp. MR-4	4251213
YP_733417.1	CDS	Shewmr4_1281	NC_008321.1	1488862	1489200	D	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: son:SO3229 flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE	1488862..1489200	Shewanella sp. MR-4	4251214
YP_733418.1	CDS	fliF	NC_008321.1	1489245	1490930	D	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein	1489245..1490930	Shewanella sp. MR-4	4251215
YP_733419.1	CDS	fliG	NC_008321.1	1490923	1491969	D	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G	1490923..1491969	Shewanella sp. MR-4	4251216
YP_733420.1	CDS	fliH	NC_008321.1	1491956	1492906	D	binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H	1491956..1492906	Shewanella sp. MR-4	4251217
YP_733421.1	CDS	fliI	NC_008321.1	1492875	1494212	D	involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase	1492875..1494212	Shewanella sp. MR-4	4251218
YP_733422.1	CDS	Shewmr4_1286	NC_008321.1	1494224	1494670	D	TIGRFAM: flagellar export protein FliJ; KEGG: son:SO3224 flagellar protein FliJ; flagellar export protein FliJ	1494224..1494670	Shewanella sp. MR-4	4251219
YP_733423.1	CDS	Shewmr4_1287	NC_008321.1	1494813	1496573	D	PFAM: flagellar hook-length control protein; KEGG: son:SO3223 flagellar hook-length control protein FliK; flagellar hook-length control protein	1494813..1496573	Shewanella sp. MR-4	4251220
YP_733424.1	CDS	fliL	NC_008321.1	1496657	1497184	D	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL	1496657..1497184	Shewanella sp. MR-4	4251221
YP_733425.1	CDS	fliM	NC_008321.1	1497225	1498256	D	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM	1497225..1498256	Shewanella sp. MR-4	4251222
YP_733426.1	CDS	fliN	NC_008321.1	1498269	1498643	D	One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein	1498269..1498643	Shewanella sp. MR-4	4251223
YP_733427.1	CDS	Shewmr4_1291	NC_008321.1	1498677	1499084	D	PFAM: flagellar biosynthesis protein, FliO; KEGG: son:SO3219 flagellar protein FliO; flagellar biosynthesis protein, FliO	1498677..1499084	Shewanella sp. MR-4	4251224
YP_733428.1	CDS	fliP	NC_008321.1	1499081	1499827	D	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP	1499081..1499827	Shewanella sp. MR-4	4251225
YP_733429.1	CDS	Shewmr4_1293	NC_008321.1	1499845	1500114	D	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: son:SO3217 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ	1499845..1500114	Shewanella sp. MR-4	4251226
YP_733430.1	CDS	fliR	NC_008321.1	1500119	1500916	D	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR	1500119..1500916	Shewanella sp. MR-4	4251227
YP_733431.1	CDS	flhB	NC_008321.1	1500934	1502064	D	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB	1500934..1502064	Shewanella sp. MR-4	4251228
YP_733432.1	CDS	flhA	NC_008321.1	1502183	1504282	D	membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA	1502183..1504282	Shewanella sp. MR-4	4251229
YP_733433.1	CDS	flhF	NC_008321.1	1504294	1505670	D	positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF	1504294..1505670	Shewanella sp. MR-4	4251230
YP_733434.1	CDS	Shewmr4_1298	NC_008321.1	1505675	1506556	D	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO3211 flagellar biosynthetic protein FlhG; cobyrinic acid a,c-diamide synthase	1505675..1506556	Shewanella sp. MR-4	4251231
YP_733435.1	CDS	fliA	NC_008321.1	1506549	1507262	D	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor	1506549..1507262	Shewanella sp. MR-4	4251319
YP_733436.1	CDS	Shewmr4_1300	NC_008321.1	1507310	1507693	D	PFAM: response regulator receiver; KEGG: son:SO3209 chemotaxis protein CheY; response regulator receiver protein	1507310..1507693	Shewanella sp. MR-4	4251320
YP_733437.1	CDS	Shewmr4_1301	NC_008321.1	1507707	1508444	D	PFAM: Chemotaxis phosphatase, CheZ; KEGG: son:SO3208 chemotaxis protein CheZ; chemotaxis phosphatase, CheZ	1507707..1508444	Shewanella sp. MR-4	4251321
YP_733438.1	CDS	Shewmr4_1302	NC_008321.1	1508460	1510742	D	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: son:SO3207 chemotaxis protein; CheA signal transduction histidine kinases	1508460..1510742	Shewanella sp. MR-4	4251322
YP_733439.1	CDS	Shewmr4_1303	NC_008321.1	1510761	1511879	D	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase	1510761..1511879	Shewanella sp. MR-4	4251323
YP_733440.1	CDS	Shewmr4_1304	NC_008321.1	1511905	1512405	D	KEGG: son:SO3205 hypothetical protein; hypothetical protein	1511905..1512405	Shewanella sp. MR-4	4251324
YP_733441.1	CDS	Shewmr4_1305	NC_008321.1	1512468	1513259	D	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO3204 ParA family protein; cobyrinic acid a,c-diamide synthase	1512468..1513259	Shewanella sp. MR-4	4251325
YP_733442.1	CDS	Shewmr4_1306	NC_008321.1	1513243	1514250	D	PFAM: CheW domain protein; KEGG: son:SO3203 CheW domain protein; CheW protein	1513243..1514250	Shewanella sp. MR-4	4251326
YP_733443.1	CDS	Shewmr4_1307	NC_008321.1	1514258	1514752	D	PFAM: CheW domain protein; KEGG: son:SO3202 purine-binding chemotaxis protein CheW; CheW protein	1514258..1514752	Shewanella sp. MR-4	4251327
YP_733444.1	CDS	Shewmr4_1308	NC_008321.1	1514907	1515305	D	KEGG: son:SO3200 hypothetical protein; hypothetical protein	1514907..1515305	Shewanella sp. MR-4	4251328
YP_733445.1	CDS	Shewmr4_1309	NC_008321.1	1515333	1515644	R	KEGG: son:SO3199 FlhB domain protein; FlhB domain-containing protein	complement(1515333..1515644)	Shewanella sp. MR-4	4251329
YP_733446.1	CDS	Shewmr4_1310	NC_008321.1	1515657	1517672	R	KEGG: son:SO3198 hypothetical protein; hypothetical protein	complement(1515657..1517672)	Shewanella sp. MR-4	4251330
YP_733447.1	CDS	Shewmr4_1311	NC_008321.1	1517894	1518679	D	PFAM: VacJ family lipoprotein; KEGG: son:SO3197 vacJ lipoprotein, putative; VacJ family lipoprotein	1517894..1518679	Shewanella sp. MR-4	4251331
YP_733448.1	CDS	Shewmr4_1312	NC_008321.1	1518801	1519904	D	PFAM: response regulator receiver; KEGG: son:SO3196 response regulator; response regulator receiver protein	1518801..1519904	Shewanella sp. MR-4	4251332
YP_733449.1	CDS	Shewmr4_1313	NC_008321.1	1520089	1521558	R	TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: sdn:Sden_1357 amino acid/peptide transporter; amino acid/peptide transporter	complement(1520089..1521558)	Shewanella sp. MR-4	4251333
YP_733450.1	CDS	Shewmr4_1314	NC_008321.1	1522031	1522531	D	KEGG: son:SO3194 transcriptional activator rfaH, putative; TIGRFAM: transcriptional activator RfaH; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; transcription antitermination protein nusG	1522031..1522531	Shewanella sp. MR-4	4251334
YP_733451.1	CDS	Shewmr4_1315	NC_008321.1	1523323	1525836	D	PFAM: polysaccharide export protein; KEGG: son:SO3193 polysaccharide biosynthesis protein; polysaccharide export protein	1523323..1525836	Shewanella sp. MR-4	4251335
YP_733452.1	CDS	Shewmr4_1316	NC_008321.1	1525977	1526330	D	crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein	1525977..1526330	Shewanella sp. MR-4	4251336
YP_733453.1	CDS	Shewmr4_1317	NC_008321.1	1526532	1527518	D	PFAM: lipopolysaccharide biosynthesis; KEGG: son:SO3191 chain length determinant protein; lipopolysaccharide biosynthesis	1526532..1527518	Shewanella sp. MR-4	4251337
YP_733454.1	CDS	Shewmr4_1318	NC_008321.1	1527742	1528821	D	NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose; dTDP-glucose 4,6 dehydratase	1527742..1528821	Shewanella sp. MR-4	4251338
YP_733455.1	CDS	Shewmr4_1319	NC_008321.1	1528892	1529767	D	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: son:SO3186 glucose-1-phosphate-thymidylyltransferase; glucose-1-phosphate thymidylyltransferase	1528892..1529767	Shewanella sp. MR-4	4251339
YP_733456.1	CDS	Shewmr4_1320	NC_008321.1	1529773	1531200	D	PFAM: polysaccharide biosynthesis protein; KEGG: bth:BT1717 putative lipopolysaccharide biosynthesis protein; polysaccharide biosynthesis protein	1529773..1531200	Shewanella sp. MR-4	4251340
YP_733457.1	CDS	Shewmr4_1321	NC_008321.1	1531231	1532340	D	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rme:Rmet_5236 DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase	1531231..1532340	Shewanella sp. MR-4	4251341
YP_733458.1	CDS	Shewmr4_1322	NC_008321.1	1532345	1532920	D	KEGG: vch:VC0252 acetyltransferase RfbO, CysE/LacA/LpxA/NodL family; acetyltransferase	1532345..1532920	Shewanella sp. MR-4	4251342
YP_733459.1	CDS	Shewmr4_1323	NC_008321.1	1532914	1534098	D	KEGG: gsu:GSU3022 hypothetical protein; hypothetical protein	1532914..1534098	Shewanella sp. MR-4	4251343
YP_733460.1	CDS	Shewmr4_1324	NC_008321.1	1534733	1535761	D	KEGG: bld:BLi03688 YveQ; hypothetical protein	1534733..1535761	Shewanella sp. MR-4	4251344
YP_733461.1	CDS	Shewmr4_1325	NC_008321.1	1535803	1536570	D	PFAM: glycosyl transferase, family 2; KEGG: oih:OB2925 teichuronic acid biosynthesis; glycosyl transferase family protein	1535803..1536570	Shewanella sp. MR-4	4251345
YP_733462.1	CDS	Shewmr4_1326	NC_008321.1	1536574	1537668	D	KEGG: mst:Msp_0055 predicted glycosyltransferase; hypothetical protein	1536574..1537668	Shewanella sp. MR-4	4251346
YP_733463.1	CDS	Shewmr4_1327	NC_008321.1	1537665	1538675	D	PFAM: glycosyl transferase, group 1; KEGG: rsp:RSP_4207 glycosyl transferase, group 1; glycosyl transferase, group 1	1537665..1538675	Shewanella sp. MR-4	4251347
YP_733464.1	CDS	Shewmr4_1328	NC_008321.1	1538822	1540240	D	KEGG: vvy:VV0352 mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase, type II; Nucleotidyl transferase; Cupin 2, conserved barrel domain protein; mannose-1-phosphate guanylyltransferase (GDP)	1538822..1540240	Shewanella sp. MR-4	4251348
YP_733465.1	CDS	Shewmr4_1329	NC_008321.1	1540244	1541662	D	PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: stt:t0790 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/subunit	1540244..1541662	Shewanella sp. MR-4	4251349
YP_733466.1	CDS	Shewmr4_1330	NC_008321.1	1541694	1542860	D	PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: vpa:VP0236 nucleotide sugar dehydrogenase; UDP-glucose 6-dehydrogenase	1541694..1542860	Shewanella sp. MR-4	4251350
YP_733467.1	CDS	Shewmr4_1331	NC_008321.1	1543063	1544136	D	TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4; KEGG: ppr:PBPRA2673 hypothetical undecaprenylphosphateN-acetylglucosamine 1-phosphate transferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	1543063..1544136	Shewanella sp. MR-4	4251351
YP_733468.1	CDS	Shewmr4_1332	NC_008321.1	1544281	1545342	D	TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4; KEGG: cps:CPS_2091 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase	1544281..1545342	Shewanella sp. MR-4	4251352
YP_733469.1	CDS	Shewmr4_1333	NC_008321.1	1545415	1546767	D	TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: hit:NTHI1664 predicted phosphomannomutase; phosphoglucosamine mutase	1545415..1546767	Shewanella sp. MR-4	4251353
YP_733470.1	CDS	Shewmr4_1335	NC_008321.1	1548249	1548899	R	PFAM: protein of unknown function DUF886; KEGG: son:SO3164 hypothetical protein; hypothetical protein	complement(1548249..1548899)	Shewanella sp. MR-4	4251354
YP_733471.1	CDS	Shewmr4_1336	NC_008321.1	1548990	1549502	R	PFAM: copper resistance lipoprotein NlpE; KEGG: son:SO3163 lipoprotein; copper resistance lipoprotein NlpE	complement(1548990..1549502)	Shewanella sp. MR-4	4251355
YP_733472.1	CDS	Shewmr4_1337	NC_008321.1	1549812	1551173	D	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO3162 sensor histidine kinase; GAF sensor signal transduction histidine kinase	1549812..1551173	Shewanella sp. MR-4	4251356
YP_733473.1	CDS	Shewmr4_1338	NC_008321.1	1551247	1552185	D	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: eba:ebA2277 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase	1551247..1552185	Shewanella sp. MR-4	4251357
YP_733474.1	CDS	Shewmr4_1339	NC_008321.1	1552172	1552714	D	KEGG: son:SO3160 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase	1552172..1552714	Shewanella sp. MR-4	4251358
YP_733475.1	CDS	Shewmr4_1340	NC_008321.1	1552740	1555103	R	PFAM: protein of unknown function DUF940, membrane lipoprotein putative; KEGG: son:SO3159 hypothetical protein; hypothetical protein	complement(1552740..1555103)	Shewanella sp. MR-4	4251359
YP_733476.1	CDS	Shewmr4_1341	NC_008321.1	1555103	1555888	R	PFAM: protein of unknown function DUF1017; KEGG: son:SO3158 polysaccharide synthesis-related protein; hypothetical protein	complement(1555103..1555888)	Shewanella sp. MR-4	4251360
YP_733477.1	CDS	Shewmr4_1342	NC_008321.1	1555899	1556609	R	KEGG: son:SO3157 lipoprotein, putative; putative lipoprotein	complement(1555899..1556609)	Shewanella sp. MR-4	4251361
YP_733478.1	CDS	Shewmr4_1343	NC_008321.1	1556761	1557003	R	KEGG: son:SO3156.1 hypothetical protein; hypothetical protein	complement(1556761..1557003)	Shewanella sp. MR-4	4251362
YP_733479.1	CDS	Shewmr4_1344	NC_008321.1	1557276	1558400	R	PFAM: Patatin; KEGG: son:SO3155 hypothetical protein; patatin	complement(1557276..1558400)	Shewanella sp. MR-4	4251363
YP_733480.1	CDS	Shewmr4_1345	NC_008321.1	1558666	1560378	R	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase	complement(1558666..1560378)	Shewanella sp. MR-4	4251364
YP_733481.1	CDS	Shewmr4_1346	NC_008321.1	1560549	1561178	R	PFAM: transferase hexapeptide repeat containing protein; KEGG: son:SO3152 acetyltransferase, CysE/LacA/LpxA/NodL family; hexapaptide repeat-containing transferase	complement(1560549..1561178)	Shewanella sp. MR-4	4251365
YP_733482.1	CDS	Shewmr4_1347	NC_008321.1	1561179	1561913	R	PFAM: protein of unknown function UPF0066; KEGG: son:SO3151 hypothetical protein; hypothetical protein	complement(1561179..1561913)	Shewanella sp. MR-4	4251366
YP_733483.1	CDS	Shewmr4_1348	NC_008321.1	1562008	1562388	R	KEGG: son:SO3150 lipoprotein, putative; putative lipoprotein	complement(1562008..1562388)	Shewanella sp. MR-4	4251367
YP_733484.1	CDS	Shewmr4_1349	NC_008321.1	1562466	1563755	R	KEGG: son:SO3149 hypothetical protein; hypothetical protein	complement(1562466..1563755)	Shewanella sp. MR-4	4251368
YP_733485.1	CDS	Shewmr4_1350	NC_008321.1	1563755	1566829	R	PFAM: amidohydrolase; KEGG: ilo:IL1717 secreted enzyme, contains two amidohydrolase related domains; amidohydrolase	complement(1563755..1566829)	Shewanella sp. MR-4	4251369
YP_733486.1	CDS	Shewmr4_1351	NC_008321.1	1567031	1567423	R	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: son:SO3146 DNA-binding protein, H-NS family; histone family protein nucleoid-structuring protein H-NS	complement(1567031..1567423)	Shewanella sp. MR-4	4251370
YP_733487.1	CDS	Shewmr4_1352	NC_008321.1	1567733	1568482	D	PFAM: electron transfer flavoprotein beta-subunit; KEGG: son:SO3145 electron transfer flavoprotein, beta subunit; electron transfer flavoprotein beta-subunit	1567733..1568482	Shewanella sp. MR-4	4251371
YP_733488.1	CDS	Shewmr4_1353	NC_008321.1	1568483	1569409	D	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: son:SO3144 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha	1568483..1569409	Shewanella sp. MR-4	4251372
YP_733489.1	CDS	Shewmr4_1354	NC_008321.1	1569781	1571349	D	PFAM: Na+/H+ antiporter NhaC; KEGG: sdn:Sden_2537 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC	1569781..1571349	Shewanella sp. MR-4	4251373
YP_733490.1	CDS	Shewmr4_1355	NC_008321.1	1571467	1573617	R	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO3142 peptidyl-dipeptidase Dcp; peptidyl-dipeptidase Dcp	complement(1571467..1573617)	Shewanella sp. MR-4	4251374
YP_733491.1	CDS	Shewmr4_1356	NC_008321.1	1573788	1575878	R	KEGG: son:SO3140.2 hypothetical protein; hypothetical protein	complement(1573788..1575878)	Shewanella sp. MR-4	4251375
YP_733492.1	CDS	Shewmr4_1357	NC_008321.1	1576417	1576995	D	catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase	1576417..1576995	Shewanella sp. MR-4	4251376
YP_733493.1	CDS	Shewmr4_1358	NC_008321.1	1577283	1580354	D	KEGG: sdn:Sden_3098 hypothetical protein; hypothetical protein	1577283..1580354	Shewanella sp. MR-4	4251377
YP_733494.1	CDS	Shewmr4_1359	NC_008321.1	1580499	1581878	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO3138 C4-dicarboxylate transport transcriptional regulatory protein; two component, sigma54 specific, Fis family transcriptional regulator	complement(1580499..1581878)	Shewanella sp. MR-4	4251378
YP_733495.1	CDS	Shewmr4_1360	NC_008321.1	1581875	1583686	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO3136.1 hypothetical two-component sensor histidine kinase protein; periplasmic sensor signal transduction histidine kinase	complement(1581875..1583686)	Shewanella sp. MR-4	4251379
YP_733496.1	CDS	Shewmr4_1361	NC_008321.1	1583786	1585183	R	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO3136 C4-dicarboxylate transport protein; TRAP dicarboxylate transporter, DctM subunit	complement(1583786..1585183)	Shewanella sp. MR-4	4251380
YP_733497.1	CDS	Shewmr4_1362	NC_008321.1	1585183	1585827	R	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: son:SO3135 C4-dicarboxylate transporter, putative; tripartite ATP-independent periplasmic transporter DctQ	complement(1585183..1585827)	Shewanella sp. MR-4	4251381
YP_733498.1	CDS	Shewmr4_1363	NC_008321.1	1585890	1586912	R	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: son:SO3134 C4-dicarboxylate-binding periplasmic protein; TRAP dicarboxylate transporter, DctP subunit	complement(1585890..1586912)	Shewanella sp. MR-4	4251382
YP_733499.1	CDS	Shewmr4_1364	NC_008321.1	1587307	1587537	R	KEGG: son:SO3132 hypothetical protein; hypothetical protein	complement(1587307..1587537)	Shewanella sp. MR-4	4251383
YP_733500.1	CDS	gltX	NC_008321.1	1588908	1590317	D	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase	1588908..1590317	Shewanella sp. MR-4	4251384
YP_733501.1	CDS	Shewmr4_1366	NC_008321.1	1592640	1594469	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative; ABC transporter-like protein	complement(1592640..1594469)	Shewanella sp. MR-4	4251385
YP_733502.1	CDS	Shewmr4_1367	NC_008321.1	1594653	1596281	D	PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: son:SO3127 Ada regulatory protein, putative; transcriptional regulator Ada / DNA-3-methyladenine glycosylase II / DNA-O6-methylguanine--protein-cysteine S-methyltransferase	1594653..1596281	Shewanella sp. MR-4	4251386
YP_733503.1	CDS	Shewmr4_1368	NC_008321.1	1596415	1596981	D	KEGG: son:SO3126 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase	1596415..1596981	Shewanella sp. MR-4	4251387
YP_733504.1	CDS	Shewmr4_1369	NC_008321.1	1597019	1598302	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO3125 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	1597019..1598302	Shewanella sp. MR-4	4251388
YP_733505.1	CDS	Shewmr4_1370	NC_008321.1	1598368	1598838	D	PFAM: Dual specificity protein phosphatase; KEGG: son:SO3124 tyrosine-specific protein phosphatase, putative; dual specificity protein phosphatase	1598368..1598838	Shewanella sp. MR-4	4251389
YP_733506.1	CDS	Shewmr4_1371	NC_008321.1	1598874	1600496	D	PFAM: phospholipase D/Transphosphatidylase; KEGG: vvy:VV1159 hypothetical protein; phospholipase D/transphosphatidylase	1598874..1600496	Shewanella sp. MR-4	4251390
YP_733507.1	CDS	Shewmr4_1372	NC_008321.1	1600588	1601487	D	PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO3123 chemotaxis protein CheV; response regulator receiver modulated CheW protein	1600588..1601487	Shewanella sp. MR-4	4251391
YP_733508.1	CDS	Shewmr4_1373	NC_008321.1	1601658	1602884	D	involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT	1601658..1602884	Shewanella sp. MR-4	4251392
YP_733509.1	CDS	Shewmr4_1374	NC_008321.1	1602961	1603485	D	KEGG: son:SO3121 hypothetical protein; hypothetical protein	1602961..1603485	Shewanella sp. MR-4	4251393
YP_733510.1	CDS	Shewmr4_1375	NC_008321.1	1603538	1604917	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase domain protein; KEGG: son:SO3120 oxidoreductase, Gfo/Idh/MocA family; twin-arginine translocation pathway signal	complement(1603538..1604917)	Shewanella sp. MR-4	4251394
YP_733511.1	CDS	Shewmr4_1376	NC_008321.1	1605253	1605687	D	KEGG: son:SO3119 hypothetical protein; hypothetical protein	1605253..1605687	Shewanella sp. MR-4	4251395
YP_733512.1	CDS	Shewmr4_1377	NC_008321.1	1605823	1606494	R	PFAM: pseudouridine synthase; KEGG: sdn:Sden_2524 pseudouridylate synthase; pseudouridylate synthase	complement(1605823..1606494)	Shewanella sp. MR-4	4251396
YP_733513.1	CDS	Shewmr4_1378	NC_008321.1	1606590	1607144	R	PFAM: Redoxin domain protein; KEGG: son:SO3117 thioredoxin, putative; redoxin domain-containing protein	complement(1606590..1607144)	Shewanella sp. MR-4	4251397
YP_733514.1	CDS	Shewmr4_1379	NC_008321.1	1607249	1607875	R	KEGG: son:SO3116 hypothetical protein; hypothetical protein	complement(1607249..1607875)	Shewanella sp. MR-4	4251398
YP_733515.1	CDS	Shewmr4_1380	NC_008321.1	1608058	1608261	D	KEGG: son:SO3115 hypothetical protein; hypothetical protein	1608058..1608261	Shewanella sp. MR-4	4251399
YP_733516.1	CDS	queA	NC_008321.1	1608326	1609363	D	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase	1608326..1609363	Shewanella sp. MR-4	4251400
YP_733517.1	CDS	tgt	NC_008321.1	1609525	1610649	D	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase	1609525..1610649	Shewanella sp. MR-4	4251401
YP_733518.1	CDS	yajC	NC_008321.1	1610676	1611008	D	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC	1610676..1611008	Shewanella sp. MR-4	4251402
YP_733519.1	CDS	secD	NC_008321.1	1611026	1612876	D	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD	1611026..1612876	Shewanella sp. MR-4	4251403
YP_733520.1	CDS	secF	NC_008321.1	1612889	1613836	D	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF	1612889..1613836	Shewanella sp. MR-4	4251404
YP_733521.1	CDS	Shewmr4_1386	NC_008321.1	1614093	1614410	D	KEGG: son:SO3109 hypothetical protein; hypothetical protein	1614093..1614410	Shewanella sp. MR-4	4251405
YP_733522.1	CDS	Shewmr4_1387	NC_008321.1	1614698	1615057	D	PFAM: Rhodanese domain protein; KEGG: sdn:Sden_1406 rhodanese-like protein; rhodanese domain-containing protein	1614698..1615057	Shewanella sp. MR-4	4251406
YP_733523.1	CDS	Shewmr4_1388	NC_008321.1	1615093	1616004	D	TIGRFAM: siroheme synthase; KEGG: son:SO3108 precorrin-2 oxidase / ferrochelatase; siroheme synthase	1615093..1616004	Shewanella sp. MR-4	4251407
YP_733524.1	CDS	Shewmr4_1389	NC_008321.1	1616090	1616635	D	PFAM: YaeQ family protein; KEGG: son:SO3107 hypothetical protein; YaeQ family protein	1616090..1616635	Shewanella sp. MR-4	4251408
YP_733525.1	CDS	Shewmr4_1390	NC_008321.1	1616676	1619093	R	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Proprotein convertase, P; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9, subtilisin propeptide; KEGG: son:SO3106 cold-active serine alkaline protease; peptidase S8/S53 subtilisin kexin sedolisin	complement(1616676..1619093)	Shewanella sp. MR-4	4251409
YP_733526.1	CDS	Shewmr4_1391	NC_008321.1	1619676	1620074	R	PFAM: Rhodanese domain protein; KEGG: son:SO3105 phage shock protein E; rhodanese domain-containing protein	complement(1619676..1620074)	Shewanella sp. MR-4	4251410
YP_733527.1	CDS	Shewmr4_1392	NC_008321.1	1620100	1620312	R	KEGG: son:SO3104 hypothetical protein; hypothetical protein	complement(1620100..1620312)	Shewanella sp. MR-4	4251411
YP_733528.1	CDS	Shewmr4_1393	NC_008321.1	1620354	1623602	R	PFAM: acriflavin resistance protein; KEGG: son:SO3103 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(1620354..1623602)	Shewanella sp. MR-4	4251412
YP_733529.1	CDS	Shewmr4_1394	NC_008321.1	1623638	1624651	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3102 AcrA/AcrE family protein; RND family efflux transporter MFP subunit	complement(1623638..1624651)	Shewanella sp. MR-4	4251413
YP_733530.1	CDS	Shewmr4_1395	NC_008321.1	1624832	1625548	R	PFAM: protein of unknown function DUF541; KEGG: son:SO3101 hypothetical protein; hypothetical protein	complement(1624832..1625548)	Shewanella sp. MR-4	4251414
YP_733531.1	CDS	Shewmr4_1396	NC_008321.1	1625707	1626093	R	KEGG: son:SO3100 hypothetical protein; hypothetical protein	complement(1625707..1626093)	Shewanella sp. MR-4	4251415
YP_733532.1	CDS	Shewmr4_1397	NC_008321.1	1626194	1627489	R	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO3099 long-chain fatty acid transport protein, putative; aromatic hydrocarbon degradation membrane protein	complement(1626194..1627489)	Shewanella sp. MR-4	4251416
YP_733533.1	CDS	Shewmr4_1398	NC_008321.1	1627830	1629281	R	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: sdn:Sden_1520 sodium/proline symporter; sodium/proline symporter	complement(1627830..1629281)	Shewanella sp. MR-4	4251417
YP_733534.1	CDS	Shewmr4_1399	NC_008321.1	1629440	1630144	R	KEGG: son:SO3097 hypothetical protein; hypothetical protein	complement(1629440..1630144)	Shewanella sp. MR-4	4251418
YP_733535.1	CDS	Shewmr4_1400	NC_008321.1	1630137	1630700	R	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor	complement(1630137..1630700)	Shewanella sp. MR-4	4251419
YP_733536.1	CDS	Shewmr4_1401	NC_008321.1	1630781	1632439	R	KEGG: son:SO3095 hypothetical protein; hypothetical protein	complement(1630781..1632439)	Shewanella sp. MR-4	4251420
YP_733537.1	CDS	Shewmr4_1402	NC_008321.1	1632436	1634481	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: von Willebrand factor, type A; Tetratricopeptide domain protein; KEGG: son:SO3094 TPR domain protein; TPR repeat-containing protein	complement(1632436..1634481)	Shewanella sp. MR-4	4251421
YP_733538.1	CDS	Shewmr4_1403	NC_008321.1	1634481	1635497	R	PFAM: von Willebrand factor, type A; KEGG: son:SO3093 von Willebrand factor type A domain protein; von Willebrand factor, type A	complement(1634481..1635497)	Shewanella sp. MR-4	4251422
YP_733539.1	CDS	Shewmr4_1404	NC_008321.1	1635491	1636084	R	KEGG: son:SO3092 hypothetical protein; hypothetical protein	complement(1635491..1636084)	Shewanella sp. MR-4	4251423
YP_733540.1	CDS	Shewmr4_1405	NC_008321.1	1636148	1637116	R	PFAM: protein of unknown function DUF58; KEGG: son:SO3091 hypothetical protein; hypothetical protein	complement(1636148..1637116)	Shewanella sp. MR-4	4251983
YP_733541.1	CDS	Shewmr4_1406	NC_008321.1	1637190	1638146	R	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: son:SO3090 MoxR domain protein; ATPase	complement(1637190..1638146)	Shewanella sp. MR-4	4251984
YP_733542.1	CDS	fadI	NC_008321.1	1638420	1639730	D	FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase	1638420..1639730	Shewanella sp. MR-4	4251985
YP_733543.1	CDS	fadJ	NC_008321.1	1639736	1641865	D	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha	1639736..1641865	Shewanella sp. MR-4	4251986
YP_733544.1	CDS	Shewmr4_1409	NC_008321.1	1642077	1642337	D	KEGG: son:SO3087 hypothetical protein; hypothetical protein	1642077..1642337	Shewanella sp. MR-4	4251987
YP_733545.1	CDS	Shewmr4_1410	NC_008321.1	1642610	1643350	R	KEGG: son:SO3085 hypothetical protein; hypothetical protein	complement(1642610..1643350)	Shewanella sp. MR-4	4251988
YP_733546.1	CDS	Shewmr4_1411	NC_008321.1	1643414	1647706	R	KEGG: son:SO3084 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	complement(1643414..1647706)	Shewanella sp. MR-4	4251989
YP_733547.1	CDS	Shewmr4_1412	NC_008321.1	1647958	1650747	R	PFAM: peptidase M16 domain protein; KEGG: son:SO3083 peptidase, M16 family; Insulysin	complement(1647958..1650747)	Shewanella sp. MR-4	4251990
YP_733548.1	CDS	Shewmr4_1413	NC_008321.1	1650917	1651387	D	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: son:SO3082 phosphohistidine phosphatase SixA; phosphohistidine phosphatase, SixA	1650917..1651387	Shewanella sp. MR-4	4251991
YP_733549.1	CDS	Shewmr4_1414	NC_008321.1	1651454	1651984	R	PFAM: Smr protein/MutS2; KEGG: son:SO3081 Smr domain protein; hypothetical protein	complement(1651454..1651984)	Shewanella sp. MR-4	4251992
YP_733550.1	CDS	Shewmr4_1415	NC_008321.1	1652065	1653009	D	involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase	1652065..1653009	Shewanella sp. MR-4	4251993
YP_733551.1	CDS	Shewmr4_1416	NC_008321.1	1653138	1654232	D	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase	1653138..1654232	Shewanella sp. MR-4	4251994
YP_733552.1	CDS	Shewmr4_1417	NC_008321.1	1654302	1655471	D	PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: son:SO3078 major facilitator family protein, putative; major facilitator transporter	1654302..1655471	Shewanella sp. MR-4	4251995
YP_733553.1	CDS	Shewmr4_1418	NC_008321.1	1655537	1656679	D	PFAM: ATP-NAD/AcoX kinase; KEGG: son:SO3077 hypothetical protein; ATP-NAD/AcoX kinase	1655537..1656679	Shewanella sp. MR-4	4251996
YP_733554.1	CDS	Shewmr4_1419	NC_008321.1	1656735	1657016	D	KEGG: son:SO3076 hypothetical protein; hypothetical protein	1656735..1657016	Shewanella sp. MR-4	4251997
YP_733555.1	CDS	Shewmr4_1420	NC_008321.1	1657020	1657628	D	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO3075 RNA methyltransferase, TrmH family, putative; tRNA/rRNA methyltransferase (SpoU)	1657020..1657628	Shewanella sp. MR-4	4251998
YP_733556.1	CDS	Shewmr4_1421	NC_008321.1	1657839	1659767	R	PFAM: FAD dependent oxidoreductase; KEGG: son:SO3073 hypothetical protein; FAD dependent oxidoreductase	complement(1657839..1659767)	Shewanella sp. MR-4	4251999
YP_733557.1	CDS	Shewmr4_1422	NC_008321.1	1660053	1661288	D	PFAM: beta-ketoacyl synthase; KEGG: son:SO3072 3-oxoacyl-(acyl-carrier-protein) synthase I; 3-oxoacyl-[acyl-carrier-protein] synthase I	1660053..1661288	Shewanella sp. MR-4	4252000
YP_733558.1	CDS	Shewmr4_1423	NC_008321.1	1661702	1662832	D	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO3071 erythronate-4-phosphate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region	1661702..1662832	Shewanella sp. MR-4	4252001
YP_733559.1	CDS	Shewmr4_1424	NC_008321.1	1662835	1663851	D	KEGG: son:SO3070 aspartate semialdehyde dehydrogenese; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate semialdehyde dehydrogenase	1662835..1663851	Shewanella sp. MR-4	4252002
YP_733560.1	CDS	Shewmr4_1425	NC_008321.1	1664031	1667420	D	KEGG: son:SO3069 putative membrane protein; hypothetical protein	1664031..1667420	Shewanella sp. MR-4	4252003
YP_733561.1	CDS	truA	NC_008321.1	1667524	1668309	D	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A	1667524..1668309	Shewanella sp. MR-4	4252004
YP_733562.1	CDS	Shewmr4_1427	NC_008321.1	1668361	1669659	D	TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: son:SO3067 FolC bifunctional protein; FolC bifunctional protein	1668361..1669659	Shewanella sp. MR-4	4252005
YP_733563.1	CDS	Shewmr4_1428	NC_008321.1	1669652	1670476	D	PFAM: Sporulation domain protein; KEGG: son:SO3066 DedD protein; sporulation domain-containing protein	1669652..1670476	Shewanella sp. MR-4	4252006
YP_733564.1	CDS	Shewmr4_1429	NC_008321.1	1670587	1671075	D	PFAM: Colicin V production protein; KEGG: son:SO3065 colicin V production protein; colicin V production protein	1670587..1671075	Shewanella sp. MR-4	4252007
YP_733565.1	CDS	Shewmr4_1430	NC_008321.1	1671257	1672771	D	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase	1671257..1672771	Shewanella sp. MR-4	4252008
YP_733566.1	CDS	Shewmr4_1431	NC_008321.1	1672886	1674373	R	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO3063 sodium:alanine symporter family protein; amino acid carrier protein	complement(1672886..1674373)	Shewanella sp. MR-4	4252009
YP_733567.1	CDS	Shewmr4_1432	NC_008321.1	1674736	1675023	R	KEGG: son:SO3062 hypothetical protein; hypothetical protein	complement(1674736..1675023)	Shewanella sp. MR-4	4252010
YP_733568.1	CDS	Shewmr4_1433	NC_008321.1	1675222	1677342	D	decatenates replicating daughter chromosomes; DNA topoisomerase III	1675222..1677342	Shewanella sp. MR-4	4252011
YP_733569.1	CDS	Shewmr4_1434	NC_008321.1	1677687	1678976	R	PFAM: alpha/beta hydrolase fold; KEGG: son:SO3055 proline iminopeptidase; prolyl aminopeptidase 2	complement(1677687..1678976)	Shewanella sp. MR-4	4252012
YP_733570.1	CDS	Shewmr4_1435	NC_008321.1	1679156	1679800	D	PFAM: beta-lactamase domain protein; KEGG: son:SO3054 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein	1679156..1679800	Shewanella sp. MR-4	4252013
YP_733571.1	CDS	Shewmr4_1436	NC_008321.1	1680133	1681872	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3052 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	1680133..1681872	Shewanella sp. MR-4	4252014
YP_733572.1	CDS	Shewmr4_1437	NC_008321.1	1682105	1683118	D	PFAM: protein of unknown function DUF182; KEGG: son:SO3051 hypothetical xanthine dehydrogenase accessory factor; hypothetical protein	1682105..1683118	Shewanella sp. MR-4	4252015
YP_733573.1	CDS	Shewmr4_1438	NC_008321.1	1683118	1683804	D	KEGG: son:SO3050 hypothetical protein; hypothetical protein	1683118..1683804	Shewanella sp. MR-4	4252016
YP_733574.1	CDS	Shewmr4_1439	NC_008321.1	1683808	1684305	D	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: son:SO3049 isoquinoline 1-oxidoreductase, alpha subunit, putative; 2Fe-2S iron-sulfur cluster binding domain-containing protein	1683808..1684305	Shewanella sp. MR-4	4252017
YP_733575.1	CDS	Shewmr4_1440	NC_008321.1	1684307	1686553	D	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: son:SO3048 isoquinoline 1-oxidoreductase, beta subunit, putative; twin-arginine translocation pathway signal	1684307..1686553	Shewanella sp. MR-4	4252018
YP_733576.1	CDS	Shewmr4_1441	NC_008321.1	1686924	1687415	D	PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein; hypothetical protein	1686924..1687415	Shewanella sp. MR-4	4252019
YP_733577.1	CDS	Shewmr4_1442	NC_008321.1	1687531	1688985	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: sdn:Sden_0861 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	1687531..1688985	Shewanella sp. MR-4	4252020
YP_733578.1	CDS	Shewmr4_1443	NC_008321.1	1689444	1689749	R	KEGG: son:SO2209 hypothetical protein; hypothetical protein	complement(1689444..1689749)	Shewanella sp. MR-4	4252021
YP_733579.1	CDS	Shewmr4_1444	NC_008321.1	1689953	1691176	D	PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: eci:UTI89_P067 transposase; transposase, IS204/IS1001/IS1096/IS1165 family protein	1689953..1691176	Shewanella sp. MR-4	4252022
YP_733580.1	CDS	Shewmr4_1445	NC_008321.1	1691502	1692464	D	KEGG: cps:CPS_2938 hypothetical protein; hypothetical protein	1691502..1692464	Shewanella sp. MR-4	4252023
YP_733581.1	CDS	Shewmr4_1446	NC_008321.1	1692585	1693571	D	PFAM: restriction endonuclease; KEGG: dde:Dde_2800 hypothetical protein; restriction endonuclease	1692585..1693571	Shewanella sp. MR-4	4252024
YP_733582.1	CDS	Shewmr4_1447	NC_008321.1	1694062	1694874	R	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III	complement(1694062..1694874)	Shewanella sp. MR-4	4252025
YP_733583.1	CDS	Shewmr4_1448	NC_008321.1	1694874	1695173	R	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein	complement(1694874..1695173)	Shewanella sp. MR-4	4252026
YP_733584.1	CDS	Shewmr4_1449	NC_008321.1	1695173	1695718	R	Involved in cell division; probably involved in intracellular septation; intracellular septation protein A	complement(1695173..1695718)	Shewanella sp. MR-4	4252027
YP_733585.1	CDS	Shewmr4_1450	NC_008321.1	1695880	1696917	R	PFAM: ferric iron reductase; KEGG: son:SO3034 ferric iron reductase protein, putative; ferric iron reductase	complement(1695880..1696917)	Shewanella sp. MR-4	4252028
YP_733586.1	CDS	Shewmr4_1451	NC_008321.1	1697006	1699219	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO3033 ferric alcaligin siderophore receptor; TonB-dependent siderophore receptor	complement(1697006..1699219)	Shewanella sp. MR-4	4252029
YP_733587.1	CDS	Shewmr4_1452	NC_008321.1	1699305	1701194	R	PFAM: IucA/IucC family protein; KEGG: son:SO3032 siderophore biosynthesis protein, putative; IucA/IucC family protein	complement(1699305..1701194)	Shewanella sp. MR-4	4252030
YP_733588.1	CDS	Shewmr4_1453	NC_008321.1	1701191	1701874	R	KEGG: son:SO3031 siderophore biosynthesis protein, putative; siderophore biosynthesis protein	complement(1701191..1701874)	Shewanella sp. MR-4	4252031
YP_733589.1	CDS	Shewmr4_1454	NC_008321.1	1701874	1703364	R	KEGG: son:SO3030 siderophore biosynthesis protein; L-lysine 6-monooxygenase (NADPH)	complement(1701874..1703364)	Shewanella sp. MR-4	4252032
YP_733590.1	CDS	Shewmr4_1455	NC_008321.1	1703937	1704221	R	KEGG: son:SO3029 hypothetical protein; hypothetical protein	complement(1703937..1704221)	Shewanella sp. MR-4	4252033
YP_733591.1	CDS	Shewmr4_1456	NC_008321.1	1704474	1704917	R	KEGG: son:SO3027 hypothetical protein; hypothetical protein	complement(1704474..1704917)	Shewanella sp. MR-4	4252034
YP_733592.1	CDS	trpA	NC_008321.1	1705126	1705962	R	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha	complement(1705126..1705962)	Shewanella sp. MR-4	4252035
YP_733593.1	CDS	Shewmr4_1458	NC_008321.1	1705968	1707158	R	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta	complement(1705968..1707158)	Shewanella sp. MR-4	4252036
YP_733594.1	CDS	Shewmr4_1459	NC_008321.1	1707267	1708754	R	monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase	complement(1707267..1708754)	Shewanella sp. MR-4	4252037
YP_733595.1	CDS	trpD	NC_008321.1	1708754	1709797	R	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase	complement(1708754..1709797)	Shewanella sp. MR-4	4252038
YP_733596.1	CDS	Shewmr4_1461	NC_008321.1	1709797	1710405	R	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II	complement(1709797..1710405)	Shewanella sp. MR-4	4252039
YP_733597.1	CDS	Shewmr4_1462	NC_008321.1	1710416	1712125	R	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I	complement(1710416..1712125)	Shewanella sp. MR-4	4252040
YP_733598.1	CDS	Shewmr4_1463	NC_008321.1	1712495	1713355	D	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: son:SO3017 TrpH family protein; phosphotransferase domain-containing protein	1712495..1713355	Shewanella sp. MR-4	4252041
YP_733599.1	CDS	Shewmr4_1464	NC_008321.1	1713352	1713972	D	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain protein; KEGG: son:SO3016 Sua5/YciO/YrdC/YwlC family protein; translation factor SUA5	1713352..1713972	Shewanella sp. MR-4	4252042
YP_733600.1	CDS	Shewmr4_1465	NC_008321.1	1714163	1714951	D	PFAM: chromosome segregation and condensation protein ScpA; KEGG: son:SO3015 putative segregation and condensation protein A; condensin subunit ScpA	1714163..1714951	Shewanella sp. MR-4	4252043
YP_733601.1	CDS	Shewmr4_1466	NC_008321.1	1714955	1715551	D	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: son:SO3014 putative segregation and condensation protein B; condensin subunit ScpB	1714955..1715551	Shewanella sp. MR-4	4252044
YP_733602.1	CDS	Shewmr4_1467	NC_008321.1	1715544	1716419	D	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_2436 pseudouridine synthase, Rsu; ribosomal large subunit pseudouridine synthase B	1715544..1716419	Shewanella sp. MR-4	4252045
YP_733603.1	CDS	Shewmr4_1468	NC_008321.1	1716554	1717291	R	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO2935 short chain dehydrogenase; short chain dehydrogenase	complement(1716554..1717291)	Shewanella sp. MR-4	4252046
YP_733604.1	CDS	Shewmr4_1469	NC_008321.1	1717553	1720036	D	KEGG: son:SO2934 hypothetical protein; hypothetical protein	1717553..1720036	Shewanella sp. MR-4	4252047
YP_733605.1	CDS	Shewmr4_1470	NC_008321.1	1720149	1721165	D	SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease	1720149..1721165	Shewanella sp. MR-4	4252048
YP_733606.1	CDS	Shewmr4_1471	NC_008321.1	1721359	1722378	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO2932 transcriptional regulator, AraC family; AraC family transcriptional regulator	1721359..1722378	Shewanella sp. MR-4	4252049
YP_733607.1	CDS	Shewmr4_1472	NC_008321.1	1722426	1723127	R	KEGG: cps:CPS_3023 hypothetical protein; hypothetical protein	complement(1722426..1723127)	Shewanella sp. MR-4	4252050
YP_733608.1	CDS	Shewmr4_1473	NC_008321.1	1723299	1724483	R	KEGG: son:SO2931 hypothetical protein; hypothetical protein	complement(1723299..1724483)	Shewanella sp. MR-4	4252051
YP_733609.1	CDS	Shewmr4_1474	NC_008321.1	1724622	1727357	R	KEGG: son:SO2930 hypothetical protein; hypothetical protein	complement(1724622..1727357)	Shewanella sp. MR-4	4252052
YP_733610.1	CDS	Shewmr4_1475	NC_008321.1	1727795	1730347	D	PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: ade:Adeh_2257 hypothetical protein; hypothetical protein	1727795..1730347	Shewanella sp. MR-4	4252053
YP_733611.1	CDS	Shewmr4_1476	NC_008321.1	1730355	1731086	D	PFAM: virulence factor family protein; KEGG: atc:AGR_C_4582 virulence gene acvB product; virulence factor family protein	1730355..1731086	Shewanella sp. MR-4	4252054
YP_733612.1	CDS	Shewmr4_1477	NC_008321.1	1731186	1732253	R	KEGG: son:SO2929 hypothetical protein; hypothetical protein	complement(1731186..1732253)	Shewanella sp. MR-4	4252055
YP_733613.1	CDS	Shewmr4_1478	NC_008321.1	1732398	1732997	R	PFAM: lipolytic enzyme, G-D-S-L family; KEGG: son:SO2928 acyl-CoA thioesterase I, putative; arylesterase	complement(1732398..1732997)	Shewanella sp. MR-4	4252056
YP_733614.1	CDS	Shewmr4_1479	NC_008321.1	1733050	1733799	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2927 ABC transporter, ATP-binding protein; ABC transporter-like protein	1733050..1733799	Shewanella sp. MR-4	4252057
YP_733615.1	CDS	Shewmr4_1480	NC_008321.1	1733803	1736304	D	PFAM: protein of unknown function DUF214; KEGG: son:SO2926 ABC transporter, permease, putative; hypothetical protein	1733803..1736304	Shewanella sp. MR-4	4252058
YP_733616.1	CDS	Shewmr4_1481	NC_008321.1	1736645	1737307	D	KEGG: son:SO2924 signal peptidase I family protein; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I	1736645..1737307	Shewanella sp. MR-4	4252059
YP_733617.1	CDS	Shewmr4_1482	NC_008321.1	1737394	1738617	R	TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: son:SO2923 sodium/glutamate symporter; sodium/glutamate symporter	complement(1737394..1738617)	Shewanella sp. MR-4	4252060
YP_733618.1	CDS	Shewmr4_1483	NC_008321.1	1739183	1740073	R	TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: son:SO2922 hypothetical protein; hypothetical protein	complement(1739183..1740073)	Shewanella sp. MR-4	4252061
YP_733619.1	CDS	folX	NC_008321.1	1740144	1740512	R	catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase	complement(1740144..1740512)	Shewanella sp. MR-4	4252062
YP_733620.1	CDS	Shewmr4_1485	NC_008321.1	1740611	1741717	D	PFAM: protein of unknown function UPF0118; KEGG: son:SO2920 hypothetical protein; hypothetical protein	1740611..1741717	Shewanella sp. MR-4	4252063
YP_733621.1	CDS	Shewmr4_1486	NC_008321.1	1741724	1742635	D	PFAM: conserved hypothetical protein 95; KEGG: son:SO2919 hypothetical protein; hypothetical protein	1741724..1742635	Shewanella sp. MR-4	4252064
YP_733622.1	CDS	Shewmr4_1487	NC_008321.1	1742753	1742977	R	KEGG: son:SO4126 hypothetical protein; hypothetical protein	complement(1742753..1742977)	Shewanella sp. MR-4	4252065
YP_733623.1	CDS	Shewmr4_1488	NC_008321.1	1743299	1743391	D	KEGG: son:SO2918 hypothetical protein; hypothetical protein	1743299..1743391	Shewanella sp. MR-4	4252066
YP_733624.1	CDS	Shewmr4_1489	NC_008321.1	1743523	1743957	R	KEGG: son:SO2917 hypothetical protein; hypothetical protein	complement(1743523..1743957)	Shewanella sp. MR-4	4252067
YP_733625.1	CDS	Shewmr4_1490	NC_008321.1	1744416	1746569	R	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase	complement(1744416..1746569)	Shewanella sp. MR-4	4252068
YP_733626.1	CDS	Shewmr4_1491	NC_008321.1	1746692	1747891	R	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase	complement(1746692..1747891)	Shewanella sp. MR-4	4252069
YP_733627.1	CDS	Shewmr4_1492	NC_008321.1	1747979	1748476	D	PFAM: protein of unknown function DUF412; KEGG: son:SO2914 hypothetical protein; hypothetical protein	1747979..1748476	Shewanella sp. MR-4	4252070
YP_733628.1	CDS	pflA	NC_008321.1	1748492	1749232	R	activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1	complement(1748492..1749232)	Shewanella sp. MR-4	4252071
YP_733629.1	CDS	Shewmr4_1494	NC_008321.1	1749296	1751578	R	KEGG: son:SO2912 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; formate acetyltransferase	complement(1749296..1751578)	Shewanella sp. MR-4	4252072
YP_733630.1	CDS	Shewmr4_1495	NC_008321.1	1752609	1753583	D	TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: son:SO2911 formate transporter, putative; formate/nitrite transporter	1752609..1753583	Shewanella sp. MR-4	4252073
YP_733631.1	CDS	Shewmr4_1496	NC_008321.1	1753821	1755389	D	PFAM: C4-dicarboxylate anaerobic carrier; Na+/H+ antiporter NhaC; KEGG: vpa:VPA1014 putative S-transferase; hypothetical protein	1753821..1755389	Shewanella sp. MR-4	4252074
YP_733632.1	CDS	Shewmr4_1497	NC_008321.1	1755543	1758194	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2907 TonB-dependent receptor domain protein; TonB-dependent receptor	complement(1755543..1758194)	Shewanella sp. MR-4	4252075
YP_733633.1	CDS	Shewmr4_1498	NC_008321.1	1758880	1759869	R	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: son:SO2906 hypothetical protein; C4-dicarboxylate transporter/malic acid transport protein	complement(1758880..1759869)	Shewanella sp. MR-4	4252076
YP_733634.1	CDS	Shewmr4_1499	NC_008321.1	1759991	1761064	R	PFAM: O-methyltransferase, family 2; Methyltransferase type 12; KEGG: son:SO2905 O-methyltransferase, putative; type 12 methyltransferase	complement(1759991..1761064)	Shewanella sp. MR-4	4252077
YP_733635.1	CDS	Shewmr4_1500	NC_008321.1	1761278	1762246	R	TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: son:SO2903 cysteine synthase A; cysteine synthase	complement(1761278..1762246)	Shewanella sp. MR-4	4252078
YP_733636.1	CDS	Shewmr4_1501	NC_008321.1	1762492	1763826	D	PFAM: RDD domain containing protein; KEGG: son:SO2902 hypothetical protein; RDD domain-containing protein	1762492..1763826	Shewanella sp. MR-4	4252079
YP_733637.1	CDS	Shewmr4_1502	NC_008321.1	1763823	1764944	D	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III	1763823..1764944	Shewanella sp. MR-4	4252080
YP_733638.1	CDS	Shewmr4_1503	NC_008321.1	1765117	1765566	D	KEGG: pfo:Pfl_1677 hypothetical protein; hypothetical protein	1765117..1765566	Shewanella sp. MR-4	4252081
YP_733639.1	CDS	Shewmr4_1504	NC_008321.1	1765625	1768024	R	KEGG: son:SO2900 hypothetical protein; hypothetical protein	complement(1765625..1768024)	Shewanella sp. MR-4	4252082
YP_733640.1	CDS	Shewmr4_1505	NC_008321.1	1768154	1768933	R	putative role in sulfur assimilation; putative sulfate transport protein CysZ	complement(1768154..1768933)	Shewanella sp. MR-4	4252083
YP_733641.1	CDS	Shewmr4_1506	NC_008321.1	1769175	1772603	D	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: son:SO2898 SMC family protein; chromosome segregation protein SMC	1769175..1772603	Shewanella sp. MR-4	4252084
YP_733642.1	CDS	Shewmr4_1507	NC_008321.1	1772630	1773670	D	KEGG: son:SO2897 cell division protein ZipA; TIGRFAM: cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding region; SMART: cell division protein ZipA; cell division protein ZipA	1772630..1773670	Shewanella sp. MR-4	4252085
YP_733643.1	CDS	Shewmr4_1508	NC_008321.1	1773763	1775835	D	KEGG: son:SO2896 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; SMART: Helix-hairpin-helix DNA-binding, class 1; DNA ligase, NAD-dependent	1773763..1775835	Shewanella sp. MR-4	4252086
YP_733644.1	CDS	Shewmr4_1509	NC_008321.1	1776061	1776555	D	KEGG: son:SO2863 hypothetical protein; hypothetical protein	1776061..1776555	Shewanella sp. MR-4	4252087
YP_733645.1	CDS	Shewmr4_1510	NC_008321.1	1776765	1777970	D	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: son:SO2862 HDIG domain protein; metal dependent phosphohydrolase	1776765..1777970	Shewanella sp. MR-4	4252088
YP_733646.1	CDS	Shewmr4_1511	NC_008321.1	1778033	1778884	D	PFAM: NAD-dependent epimerase/dehydratase; KEGG: son:SO2861 hypothetical protein; NAD-dependent epimerase/dehydratase	1778033..1778884	Shewanella sp. MR-4	4252089
YP_733647.1	CDS	Shewmr4_1512	NC_008321.1	1779015	1779638	D	PFAM: DSBA oxidoreductase; KEGG: son:SO2860 thiol:disulfide interchange protein, DsbA family; DSBA oxidoreductase	1779015..1779638	Shewanella sp. MR-4	4252090
YP_733648.1	CDS	Shewmr4_1513	NC_008321.1	1780076	1780342	D	KEGG: son:SO2858 hypothetical protein; hypothetical protein	1780076..1780342	Shewanella sp. MR-4	4252091
YP_733649.1	CDS	Shewmr4_1514	NC_008321.1	1780354	1782090	D	PFAM: Na+/solute symporter; KEGG: son:SO2857 sodium/solute symporter family protein; Na+/solute symporter	1780354..1782090	Shewanella sp. MR-4	4252092
YP_733650.1	CDS	Shewmr4_1515	NC_008321.1	1782240	1784102	D	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: son:SO2856 CBS domain protein; cyclic nucleotide-binding protein	1782240..1784102	Shewanella sp. MR-4	4252093
YP_733651.1	CDS	Shewmr4_1516	NC_008321.1	1784102	1784788	D	PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: son:SO2855 exonuclease; exonuclease, RNase T and DNA polymerase III	1784102..1784788	Shewanella sp. MR-4	4252094
YP_733652.1	CDS	Shewmr4_1517	NC_008321.1	1785036	1785461	R	PFAM: regulatory protein, MarR; KEGG: ppr:PBPRB1157 putative transcriptional regulator, MarR family; MarR family transcriptional regulator	complement(1785036..1785461)	Shewanella sp. MR-4	4252095
YP_733653.1	CDS	Shewmr4_1518	NC_008321.1	1785695	1786690	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: ppr:PBPRB1158 hypothetical alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase	1785695..1786690	Shewanella sp. MR-4	4252096
YP_733654.1	CDS	Shewmr4_1519	NC_008321.1	1787129	1787728	D	KEGG: son:SO2854 hypothetical protein; hypothetical protein	1787129..1787728	Shewanella sp. MR-4	4252097
YP_733655.1	CDS	Shewmr4_1520	NC_008321.1	1787773	1788837	R	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-(acyl carrier protein) synthase III	complement(1787773..1788837)	Shewanella sp. MR-4	4252098
YP_733656.1	CDS	Shewmr4_1521	NC_008321.1	1788930	1789601	R	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: son:SO2852 transcriptional regulator, GntR family; GntR family transcriptional regulator	complement(1788930..1789601)	Shewanella sp. MR-4	4252099
YP_733657.1	CDS	Shewmr4_1522	NC_008321.1	1789919	1790470	D	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase	1789919..1790470	Shewanella sp. MR-4	4252100
YP_733658.1	CDS	Shewmr4_1523	NC_008321.1	1796722	1797426	R	KEGG: son:SO3571 hypothetical protein; hypothetical protein	complement(1796722..1797426)	Shewanella sp. MR-4	4252101
YP_733659.1	CDS	cpdB	NC_008321.1	1797653	1799710	R	periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein	complement(1797653..1799710)	Shewanella sp. MR-4	4252102
YP_733660.1	CDS	Shewmr4_1525	NC_008321.1	1800402	1802549	D	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO3564 peptidyl-dipeptidase Dcp; peptidyl-dipeptidase Dcp	1800402..1802549	Shewanella sp. MR-4	4252103
YP_733661.1	CDS	Shewmr4_1526	NC_008321.1	1802775	1803398	D	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO3563 SM-20 domain protein; prolyl 4-hydroxylase subunit alpha	1802775..1803398	Shewanella sp. MR-4	4252104
YP_733662.1	CDS	Shewmr4_1527	NC_008321.1	1803815	1804417	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2850 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	1803815..1804417	Shewanella sp. MR-4	4252105
YP_733663.1	CDS	Shewmr4_1528	NC_008321.1	1804499	1804963	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2849 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	1804499..1804963	Shewanella sp. MR-4	4252106
YP_733664.1	CDS	Shewmr4_1529	NC_008321.1	1804998	1805393	D	KEGG: son:SO2848 hypothetical protein; hypothetical protein	1804998..1805393	Shewanella sp. MR-4	4252107
YP_733665.1	CDS	Shewmr4_1530	NC_008321.1	1805655	1806041	D	hypothetical protein	1805655..1806041	Shewanella sp. MR-4	4252108
YP_733666.1	CDS	Shewmr4_1531	NC_008321.1	1806264	1807328	D	KEGG: son:SO1840 hypothetical protein; hypothetical protein	1806264..1807328	Shewanella sp. MR-4	4252109
YP_733667.1	CDS	Shewmr4_1532	NC_008321.1	1807321	1808445	D	KEGG: son:SO1842 hypothetical protein; hypothetical protein	1807321..1808445	Shewanella sp. MR-4	4252110
YP_733668.1	CDS	Shewmr4_1533	NC_008321.1	1808445	1808960	D	KEGG: son:SO1843 hypothetical protein; hypothetical protein	1808445..1808960	Shewanella sp. MR-4	4252111
YP_733669.1	CDS	Shewmr4_1534	NC_008321.1	1809200	1812046	D	PFAM: PKD domain containing protein; Endonuclease/exonuclease/phosphatase; KEGG: son:SO1844 extracellular nuclease, putative; PKD domain-containing protein	1809200..1812046	Shewanella sp. MR-4	4252112
YP_733670.1	CDS	Shewmr4_1535	NC_008321.1	1812253	1812681	D	KEGG: son:SO1845 hypothetical protein; hypothetical protein	1812253..1812681	Shewanella sp. MR-4	4252113
YP_733671.1	CDS	Shewmr4_1536	NC_008321.1	1812739	1813635	R	KEGG: son:SO1846 hypothetical protein; hypothetical protein	complement(1812739..1813635)	Shewanella sp. MR-4	4252114
YP_733672.1	CDS	Shewmr4_1537	NC_008321.1	1813646	1814404	R	KEGG: son:SO1848 hypothetical protein; hypothetical protein	complement(1813646..1814404)	Shewanella sp. MR-4	4252115
YP_733673.1	CDS	Shewmr4_1538	NC_008321.1	1814404	1814943	R	KEGG: son:SO1849 hypothetical protein; hypothetical protein	complement(1814404..1814943)	Shewanella sp. MR-4	4252116
YP_733674.1	CDS	Shewmr4_1539	NC_008321.1	1815079	1815363	R	PFAM: heat shock protein DnaJ domain protein; KEGG: son:SO1850 DnaJ domain protein; heat shock protein DnaJ domain-containing protein	complement(1815079..1815363)	Shewanella sp. MR-4	4252117
YP_733675.1	CDS	rlmL	NC_008321.1	1816672	1818813	D	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase	1816672..1818813	Shewanella sp. MR-4	4252118
YP_733676.1	CDS	Shewmr4_1541	NC_008321.1	1818806	1819045	D	PFAM: glutaredoxin 2; KEGG: son:SO1852 hypothetical protein; glutaredoxin 2	1818806..1819045	Shewanella sp. MR-4	4252119
YP_733677.1	CDS	Shewmr4_1542	NC_008321.1	1819047	1820969	D	Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase	1819047..1820969	Shewanella sp. MR-4	4252120
YP_733678.1	CDS	Shewmr4_1543	NC_008321.1	1820998	1822824	D	KEGG: son:SO1854 hypothetical protein; hypothetical protein	1820998..1822824	Shewanella sp. MR-4	4252121
YP_733679.1	CDS	Shewmr4_1544	NC_008321.1	1823012	1823188	D	PFAM: ribosome modulation factor; KEGG: son:SO1855 ribosome modulation factor; ribosome modulation factor	1823012..1823188	Shewanella sp. MR-4	4252122
YP_733680.1	CDS	Shewmr4_1545	NC_008321.1	1823296	1823811	R	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase	complement(1823296..1823811)	Shewanella sp. MR-4	4252123
YP_733681.1	CDS	Shewmr4_1546	NC_008321.1	1823885	1825633	R	KEGG: son:SO1857 hypothetical ATP-dependent protease; ATP-dependent protease	complement(1823885..1825633)	Shewanella sp. MR-4	4252124
YP_733682.1	CDS	Shewmr4_1547	NC_008321.1	1827237	1827881	D	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator	1827237..1827881	Shewanella sp. MR-4	4252125
YP_733683.1	CDS	uvrC	NC_008321.1	1827991	1829820	D	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C	1827991..1829820	Shewanella sp. MR-4	4252126
YP_733684.1	CDS	Shewmr4_1549	NC_008321.1	1829868	1830416	D	KEGG: son:SO1862 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	1829868..1830416	Shewanella sp. MR-4	4252127
YP_733685.1	CDS	Shewmr4_1550	NC_008321.1	1831416	1831691	R	PFAM: histone family protein DNA-binding protein; KEGG: son:SO1863 DNA-binding protein, HU family; histone family protein DNA-binding protein	complement(1831416..1831691)	Shewanella sp. MR-4	4252128
YP_733686.1	CDS	Shewmr4_1551	NC_008321.1	1831799	1832344	R	KEGG: msu:MS1955 hypothetical protein; hypothetical protein	complement(1831799..1832344)	Shewanella sp. MR-4	4252129
YP_733687.1	CDS	Shewmr4_1552	NC_008321.1	1832963	1833871	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1865 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(1832963..1833871)	Shewanella sp. MR-4	4252130
YP_733688.1	CDS	Shewmr4_1553	NC_008321.1	1833868	1834698	R	KEGG: son:SO1866 hypothetical protein; hypothetical protein	complement(1833868..1834698)	Shewanella sp. MR-4	4252131
YP_733689.1	CDS	Shewmr4_1554	NC_008321.1	1834792	1835460	R	PFAM: protein of unknown function DUF480; KEGG: son:SO1867 hypothetical protein; hypothetical protein	complement(1834792..1835460)	Shewanella sp. MR-4	4252132
YP_733690.1	CDS	Shewmr4_1555	NC_008321.1	1835627	1836466	R	KEGG: son:SO1868 hypothetical protein; hypothetical protein	complement(1835627..1836466)	Shewanella sp. MR-4	4252133
YP_733691.1	CDS	Shewmr4_1556	NC_008321.1	1836943	1837095	D	hypothetical protein	1836943..1837095	Shewanella sp. MR-4	4252134
YP_733692.1	CDS	Shewmr4_1557	NC_008321.1	1837558	1839471	D	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase	1837558..1839471	Shewanella sp. MR-4	4252135
YP_733693.1	CDS	Shewmr4_1558	NC_008321.1	1839753	1840688	D	PFAM: S-adenosylmethionine decarboxylase; KEGG: son:SO1871 S-adenosylmethionine decarboxylase proenzyme, putative; S-adenosylmethionine decarboxylase	1839753..1840688	Shewanella sp. MR-4	4252136
YP_733694.1	CDS	Shewmr4_1559	NC_008321.1	1840909	1841547	D	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase	1840909..1841547	Shewanella sp. MR-4	4252137
YP_733695.1	CDS	Shewmr4_1560	NC_008321.1	1841568	1842020	D	PFAM: protein of unknown function DUF188; KEGG: son:SO2894 YaiI/YqxD family protein; hypothetical protein	1841568..1842020	Shewanella sp. MR-4	4252138
YP_733696.1	CDS	Shewmr4_1561	NC_008321.1	1842173	1842748	D	PFAM: YceI family protein; KEGG: son:SO2893 hypothetical protein; YceI family protein	1842173..1842748	Shewanella sp. MR-4	4252139
YP_733697.1	CDS	Shewmr4_1562	NC_008321.1	1842909	1843265	D	KEGG: son:SO2891 hypothetical protein; hypothetical protein	1842909..1843265	Shewanella sp. MR-4	4252140
YP_733698.1	CDS	Shewmr4_1563	NC_008321.1	1843722	1844105	D	KEGG: son:SO2890 hypothetical protein; hypothetical protein	1843722..1844105	Shewanella sp. MR-4	4252141
YP_733699.1	CDS	Shewmr4_1564	NC_008321.1	1844295	1845260	D	PFAM: protein of unknown function DUF785; KEGG: sdn:Sden_2273 protein of unknown function DUF785; hypothetical protein	1844295..1845260	Shewanella sp. MR-4	4252142
YP_733700.1	CDS	Shewmr4_1565	NC_008321.1	1845297	1847915	R	KEGG: son:SO2889 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase	complement(1845297..1847915)	Shewanella sp. MR-4	4252143
YP_733701.1	CDS	Shewmr4_1566	NC_008321.1	1848073	1848600	R	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B	complement(1848073..1848600)	Shewanella sp. MR-4	4252144
YP_733702.1	CDS	nhaB	NC_008321.1	1848696	1850297	R	involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter	complement(1848696..1850297)	Shewanella sp. MR-4	4252145
YP_733703.1	CDS	Shewmr4_1568	NC_008321.1	1850601	1851326	D	Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator	1850601..1851326	Shewanella sp. MR-4	4252146
YP_733704.1	CDS	Shewmr4_1569	NC_008321.1	1851402	1852928	R	PFAM: SpoVR family protein; KEGG: son:SO2884 hypothetical protein; SpoVR family protein	complement(1851402..1852928)	Shewanella sp. MR-4	4252147
YP_733705.1	CDS	Shewmr4_1570	NC_008321.1	1852938	1854212	R	PFAM: protein of unknown function DUF444; KEGG: son:SO2883 hypothetical protein; hypothetical protein	complement(1852938..1854212)	Shewanella sp. MR-4	4252148
YP_733706.1	CDS	Shewmr4_1572	NC_008321.1	1856459	1857043	R	PFAM: manganese and iron superoxide dismutase; KEGG: son:SO2881 superoxide dismutase, Fe; superoxide dismutase	complement(1856459..1857043)	Shewanella sp. MR-4	4252149
YP_733707.1	CDS	Shewmr4_1573	NC_008321.1	1857270	1857602	D	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: son:SO2880 glutaredoxin domain protein; glutaredoxin-like protein	1857270..1857602	Shewanella sp. MR-4	4252150
YP_733708.1	CDS	Shewmr4_1574	NC_008321.1	1857732	1858970	R	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: son:SO2879 uracil permease; uracil-xanthine permease	complement(1857732..1858970)	Shewanella sp. MR-4	4252151
YP_733709.1	CDS	Shewmr4_1575	NC_008321.1	1859186	1860268	D	KEGG: son:SO2878 hypothetical protein; hypothetical protein	1859186..1860268	Shewanella sp. MR-4	4252152
YP_733710.1	CDS	Shewmr4_1576	NC_008321.1	1860348	1861058	D	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor	1860348..1861058	Shewanella sp. MR-4	4252153
YP_733711.1	CDS	Shewmr4_1577	NC_008321.1	1861491	1862753	R	KEGG: son:SO1942 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase	complement(1861491..1862753)	Shewanella sp. MR-4	4252154
YP_733712.1	CDS	Shewmr4_1578	NC_008321.1	1862870	1863565	D	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO1944 hypothetical protein; prolyl 4-hydroxylase subunit alpha	1862870..1863565	Shewanella sp. MR-4	4252155
YP_733713.1	CDS	Shewmr4_1579	NC_008321.1	1863583	1864932	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO1945 sensor protein PhoQ; periplasmic sensor signal transduction histidine kinase	complement(1863583..1864932)	Shewanella sp. MR-4	4252156
YP_733714.1	CDS	Shewmr4_1580	NC_008321.1	1864923	1865606	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO1946 transcriptional regulatory protein PhoP; two component transcriptional regulator	complement(1864923..1865606)	Shewanella sp. MR-4	4252157
YP_733715.1	CDS	Shewmr4_1581	NC_008321.1	1865772	1866119	R	KEGG: son:SO1947 hypothetical protein; hypothetical protein	complement(1865772..1866119)	Shewanella sp. MR-4	4252158
YP_733716.1	CDS	Shewmr4_1582	NC_008321.1	1866277	1867590	R	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO1948 sodium:dicarboxylate symporter family protein; sodium:dicarboxylate symporter	complement(1866277..1867590)	Shewanella sp. MR-4	4252159
YP_733717.1	CDS	Shewmr4_1583	NC_008321.1	1867810	1871484	D	PFAM: Ig domain protein, group 1 domain protein; KEGG: son:SO1949 invasin domain protein; Ig domain-containing protein	1867810..1871484	Shewanella sp. MR-4	4252160
YP_733718.1	CDS	Shewmr4_1584	NC_008321.1	1871565	1872899	R	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase	complement(1871565..1872899)	Shewanella sp. MR-4	4252161
YP_733719.1	CDS	Shewmr4_1585	NC_008321.1	1873183	1875867	D	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I	1873183..1875867	Shewanella sp. MR-4	4252162
YP_733720.1	CDS	Shewmr4_1586	NC_008321.1	1876085	1876864	R	KEGG: son:SO2650 hypothetical protein; hypothetical protein	complement(1876085..1876864)	Shewanella sp. MR-4	4252163
YP_733721.1	CDS	cysB	NC_008321.1	1877092	1878066	D	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB	1877092..1878066	Shewanella sp. MR-4	4252164
YP_733722.1	CDS	Shewmr4_1588	NC_008321.1	1878147	1878809	R	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO2648 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator	complement(1878147..1878809)	Shewanella sp. MR-4	4252165
YP_733723.1	CDS	Shewmr4_1589	NC_008321.1	1879030	1879461	R	PFAM: thioesterase superfamily protein; KEGG: son:SO2647 cytosolic long-chain acyl-CoA thioester hydrolase family protein; thioesterase superfamily protein	complement(1879030..1879461)	Shewanella sp. MR-4	4252166
YP_733724.1	CDS	Shewmr4_1590	NC_008321.1	1879612	1880676	R	tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(1879612..1880676)	Shewanella sp. MR-4	4252167
YP_733725.1	CDS	Shewmr4_1591	NC_008321.1	1880858	1881670	R	PFAM: protein of unknown function DUF299; KEGG: son:SO2645 hypothetical protein; hypothetical protein	complement(1880858..1881670)	Shewanella sp. MR-4	4252168
YP_733726.1	CDS	Shewmr4_1592	NC_008321.1	1881795	1884164	D	catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase	1881795..1884164	Shewanella sp. MR-4	4252169
YP_733727.1	CDS	Shewmr4_1593	NC_008321.1	1884264	1887305	D	PFAM: FAD linked oxidase domain protein; KEGG: son:SO2643 oxidoreductase, FAD-binding, putative; FAD linked oxidase domain-containing protein	1884264..1887305	Shewanella sp. MR-4	4252170
YP_733728.1	CDS	Shewmr4_1594	NC_008321.1	1887400	1887891	D	PFAM: protein of unknown function DUF1285; KEGG: son:SO2642 hypothetical protein; hypothetical protein	1887400..1887891	Shewanella sp. MR-4	4252171
YP_733729.1	CDS	Shewmr4_1595	NC_008321.1	1888030	1888461	D	PFAM: regulatory protein, MarR; KEGG: son:SO2640 transcriptional regulator, MarR family; MarR family transcriptional regulator	1888030..1888461	Shewanella sp. MR-4	4252172
YP_733730.1	CDS	Shewmr4_1596	NC_008321.1	1888747	1892535	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: sco:SCO0432 probable secreted peptidase; peptidase S8/S53 subtilisin kexin sedolisin	1888747..1892535	Shewanella sp. MR-4	4252173
YP_733731.1	CDS	Shewmr4_1597	NC_008321.1	1892598	1892945	R	KEGG: son:SO2639 hypothetical protein; hypothetical protein	complement(1892598..1892945)	Shewanella sp. MR-4	4252174
YP_733732.1	CDS	Shewmr4_1598	NC_008321.1	1893140	1894174	R	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: son:SO2638 leucine dehydrogenase; leucine dehydrogenase	complement(1893140..1894174)	Shewanella sp. MR-4	4252175
YP_733733.1	CDS	Shewmr4_1599	NC_008321.1	1894454	1894912	D	KEGG: son:SO2637 hypothetical protein; hypothetical protein	1894454..1894912	Shewanella sp. MR-4	4252176
YP_733734.1	CDS	Shewmr4_1600	NC_008321.1	1895009	1896148	R	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: son:SO2636 hypothetical protein; cupin 4 family protein	complement(1895009..1896148)	Shewanella sp. MR-4	4252177
YP_733735.1	CDS	Shewmr4_1601	NC_008321.1	1896271	1897641	R	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase	complement(1896271..1897641)	Shewanella sp. MR-4	4252178
YP_733736.1	CDS	Shewmr4_1602	NC_008321.1	1897671	1898288	R	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein	complement(1897671..1898288)	Shewanella sp. MR-4	4252179
YP_733737.1	CDS	mnmA	NC_008321.1	1898292	1899410	R	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA	complement(1898292..1899410)	Shewanella sp. MR-4	4252180
YP_733738.1	CDS	Shewmr4_1604	NC_008321.1	1899631	1900122	R	PFAM: NUDIX hydrolase; KEGG: son:SO2631 MutT/nudix family protein; NUDIX hydrolase	complement(1899631..1900122)	Shewanella sp. MR-4	4252181
YP_733739.1	CDS	Shewmr4_1605	NC_008321.1	1900193	1900978	R	KEGG: sdn:Sden_1830 pseudouridine synthase, Rsu; TIGRFAM: Pseudouridine synthase, Rsu; PFAM: pseudouridine synthase; ribosomal large subunit pseudouridine synthase E	complement(1900193..1900978)	Shewanella sp. MR-4	4252182
YP_733740.1	CDS	Shewmr4_1606	NC_008321.1	1901329	1903554	D	KEGG: son:SO2629 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase, NADP-dependent	1901329..1903554	Shewanella sp. MR-4	4252183
YP_733741.1	CDS	Shewmr4_1608	NC_008321.1	1904027	1904341	D	PFAM: small multidrug resistance protein; KEGG: son:SO1901 sugE protein; small multidrug resistance protein	1904027..1904341	Shewanella sp. MR-4	4252184
YP_733742.1	CDS	Shewmr4_1609	NC_008321.1	1904570	1906096	D	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase	1904570..1906096	Shewanella sp. MR-4	4252185
YP_733743.1	CDS	Shewmr4_1610	NC_008321.1	1906641	1908764	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Proprotein convertase, P; KEGG: sdn:Sden_3045 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin	1906641..1908764	Shewanella sp. MR-4	4252186
YP_733744.1	CDS	Shewmr4_1611	NC_008321.1	1908775	1909233	D	KEGG: sdn:Sden_3044 hypothetical protein; hypothetical protein	1908775..1909233	Shewanella sp. MR-4	4252187
YP_733745.1	CDS	Shewmr4_1612	NC_008321.1	1909514	1910224	D	KEGG: son:SO1903 hypothetical protein; hypothetical protein	1909514..1910224	Shewanella sp. MR-4	4252188
YP_733746.1	CDS	Shewmr4_1613	NC_008321.1	1910380	1910697	D	KEGG: ilo:IL1490 hypothetical protein; hypothetical protein	1910380..1910697	Shewanella sp. MR-4	4252189
YP_733747.1	CDS	Shewmr4_1614	NC_008321.1	1910775	1911674	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1907 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(1910775..1911674)	Shewanella sp. MR-4	4252190
YP_733748.1	CDS	Shewmr4_1615	NC_008321.1	1911876	1912355	D	KEGG: son:SO1908 hypothetical protein; hypothetical protein	1911876..1912355	Shewanella sp. MR-4	4252191
YP_733749.1	CDS	Shewmr4_1616	NC_008321.1	1912426	1913235	D	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: son:SO1909 hypothetical protein; extradiol ring-cleavage dioxygenase III subunit B	1912426..1913235	Shewanella sp. MR-4	4252192
YP_733750.1	CDS	Shewmr4_1617	NC_008321.1	1913389	1914264	R	TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: son:SO1910 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphtoate prenyltransferase	complement(1913389..1914264)	Shewanella sp. MR-4	4252193
YP_733751.1	CDS	Shewmr4_1618	NC_008321.1	1914589	1915542	D	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO1911 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR	1914589..1915542	Shewanella sp. MR-4	4252194
YP_733752.1	CDS	Shewmr4_1619	NC_008321.1	1915657	1916523	D	KEGG: son:SO1912 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II	1915657..1916523	Shewanella sp. MR-4	4252195
YP_733753.1	CDS	Shewmr4_1620	NC_008321.1	1916525	1916929	D	KEGG: son:SO1913 hypothetical protein; hypothetical protein	1916525..1916929	Shewanella sp. MR-4	4252196
YP_733754.1	CDS	Shewmr4_1621	NC_008321.1	1917014	1917895	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1916 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(1917014..1917895)	Shewanella sp. MR-4	4252197
YP_733755.1	CDS	Shewmr4_1622	NC_008321.1	1918076	1919386	D	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO1917 multidrug resistance protein, putative; major facilitator transporter	1918076..1919386	Shewanella sp. MR-4	4252198
YP_733756.1	CDS	Shewmr4_1623	NC_008321.1	1919763	1921325	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: son:SO1918 MATE efflux family protein; MATE efflux family protein	1919763..1921325	Shewanella sp. MR-4	4252199
YP_733757.1	CDS	Shewmr4_1624	NC_008321.1	1921533	1921736	R	KEGG: son:SO1921 hypothetical protein; hypothetical protein	complement(1921533..1921736)	Shewanella sp. MR-4	4252200
YP_733758.1	CDS	Shewmr4_1625	NC_008321.1	1922044	1922355	D	PFAM: Uncharacterized conserved protein UCP029143; KEGG: son:SO1922 hypothetical protein; hypothetical protein	1922044..1922355	Shewanella sp. MR-4	4252201
YP_733759.1	CDS	Shewmr4_1626	NC_008321.1	1922383	1923477	D	hypothetical protein	1922383..1923477	Shewanella sp. MR-4	4252202
YP_733760.1	CDS	Shewmr4_1627	NC_008321.1	1923526	1926582	R	PFAM: acriflavin resistance protein; KEGG: son:SO1923 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(1923526..1926582)	Shewanella sp. MR-4	4252203
YP_733761.1	CDS	Shewmr4_1628	NC_008321.1	1926579	1929842	R	PFAM: acriflavin resistance protein; KEGG: son:SO1924 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(1926579..1929842)	Shewanella sp. MR-4	4252204
YP_733762.1	CDS	Shewmr4_1629	NC_008321.1	1929855	1930931	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO1925 HlyD family secretion protein; RND family efflux transporter MFP subunit	complement(1929855..1930931)	Shewanella sp. MR-4	4252205
YP_733763.1	CDS	gltA	NC_008321.1	1931216	1932502	R	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase	complement(1931216..1932502)	Shewanella sp. MR-4	4252206
YP_733764.1	CDS	Shewmr4_1631	NC_008321.1	1932919	1933314	D	PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: son:SO1927 succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase subunit C	1932919..1933314	Shewanella sp. MR-4	4252207
YP_733765.1	CDS	Shewmr4_1632	NC_008321.1	1933308	1933655	D	KEGG: son:SO1927.1 hypothetical succinate dehydrogenase, hydrophobic subunit; succinate dehydrogenase subunit D	1933308..1933655	Shewanella sp. MR-4	4252208
YP_733766.1	CDS	sdhA	NC_008321.1	1933656	1935422	D	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit	1933656..1935422	Shewanella sp. MR-4	4252209
YP_733767.1	CDS	sdhB	NC_008321.1	1935434	1936141	D	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit	1935434..1936141	Shewanella sp. MR-4	4252210
YP_733768.1	CDS	sucA	NC_008321.1	1936356	1939175	D	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component	1936356..1939175	Shewanella sp. MR-4	4252211
YP_733769.1	CDS	Shewmr4_1636	NC_008321.1	1939224	1940420	D	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: son:SO1931 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase); 2-oxoglutarate dehydrogenase E2 component	1939224..1940420	Shewanella sp. MR-4	4252212
YP_733770.1	CDS	sucC	NC_008321.1	1940540	1941706	D	catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta	1940540..1941706	Shewanella sp. MR-4	4252213
YP_733771.1	CDS	Shewmr4_1638	NC_008321.1	1941706	1942578	D	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: son:SO1933 succinyl-CoA synthetase alpha chain; succinyl-CoA synthetase (ADP-forming) subunit alpha	1941706..1942578	Shewanella sp. MR-4	4252214
YP_733772.1	CDS	Shewmr4_1639	NC_008321.1	1942960	1943367	D	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO1935 regulator of nucleoside diphosphate kinase; GreA/GreB family elongation factor	1942960..1943367	Shewanella sp. MR-4	4252215
YP_733773.1	CDS	Shewmr4_1640	NC_008321.1	1943415	1943912	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1936 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	1943415..1943912	Shewanella sp. MR-4	4252216
YP_733774.1	CDS	fur	NC_008321.1	1944009	1944440	R	negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator	complement(1944009..1944440)	Shewanella sp. MR-4	4252217
YP_733775.1	CDS	Shewmr4_1642	NC_008321.1	1944697	1945437	D	Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase	1944697..1945437	Shewanella sp. MR-4	4252218
YP_733776.1	CDS	Shewmr4_1643	NC_008321.1	1945440	1945904	D	KEGG: son:SO1939 hypothetical protein; hypothetical protein	1945440..1945904	Shewanella sp. MR-4	4252219
YP_733777.1	CDS	Shewmr4_1644	NC_008321.1	1946141	1946503	D	KEGG: son:SO1940 hypothetical protein; hypothetical protein	1946141..1946503	Shewanella sp. MR-4	4252220
YP_733778.1	CDS	Shewmr4_1645	NC_008321.1	1946630	1947577	D	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein, CorA family protein; KEGG: son:SO1941 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA	1946630..1947577	Shewanella sp. MR-4	4252221
YP_733779.1	CDS	Shewmr4_1646	NC_008321.1	1947735	1947941	R	KEGG: son:SO2628 stress response protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding protein family protein	complement(1947735..1947941)	Shewanella sp. MR-4	4252222
YP_733780.1	CDS	clpS	NC_008321.1	1948135	1948443	D	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS	1948135..1948443	Shewanella sp. MR-4	4252223
YP_733781.1	CDS	Shewmr4_1648	NC_008321.1	1948486	1950753	D	KEGG: son:SO2626 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease, ATP-binding subunit clpA	1948486..1950753	Shewanella sp. MR-4	4252224
YP_733782.1	CDS	infA	NC_008321.1	1950859	1951077	R	stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1	complement(1950859..1951077)	Shewanella sp. MR-4	4252225
YP_733783.1	CDS	Shewmr4_1650	NC_008321.1	1951160	1951876	R	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase	complement(1951160..1951876)	Shewanella sp. MR-4	4252226
YP_733784.1	CDS	aat	NC_008321.1	1951866	1952576	R	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase	complement(1951866..1952576)	Shewanella sp. MR-4	4252227
YP_733785.1	CDS	Shewmr4_1652	NC_008321.1	1952631	1953101	D	PFAM: 17 kDa surface antigen; KEGG: son:SO2622 hypothetical protein; 17 kDa surface antigen	1952631..1953101	Shewanella sp. MR-4	4252228
YP_733786.1	CDS	Shewmr4_1653	NC_008321.1	1953162	1953914	D	PFAM: protein of unknown function DUF34; KEGG: son:SO2621 conserved hypothetical protein TIGR00486; hypothetical protein	1953162..1953914	Shewanella sp. MR-4	4252229
YP_733787.1	CDS	Shewmr4_1654	NC_008321.1	1953992	1954948	R	PFAM: Auxin Efflux Carrier; KEGG: son:SO2620 hypothetical protein; auxin efflux carrier	complement(1953992..1954948)	Shewanella sp. MR-4	4252230
YP_733788.1	CDS	metG	NC_008321.1	1955161	1957191	R	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase	complement(1955161..1957191)	Shewanella sp. MR-4	4252231
YP_733789.1	CDS	Shewmr4_1656	NC_008321.1	1957352	1958467	D	KEGG: son:SO2618 ATP-binding protein, Mrp/Nbp35 family; ATP-binding Mrp/Nbp35 family protein	1957352..1958467	Shewanella sp. MR-4	4252232
YP_733790.1	CDS	Shewmr4_1657	NC_008321.1	1958479	1959117	D	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase	1958479..1959117	Shewanella sp. MR-4	4252233
YP_733791.1	CDS	dcd	NC_008321.1	1959147	1959728	D	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase	1959147..1959728	Shewanella sp. MR-4	4252234
YP_733792.1	CDS	Shewmr4_1659	NC_008321.1	1959734	1960543	D	PFAM: aminotransferase, class IV; KEGG: son:SO2615 4-amino-4-deoxychorismate lyase; aminodeoxychorismate lyase apoprotein	1959734..1960543	Shewanella sp. MR-4	4252235
YP_733793.1	CDS	Shewmr4_1660	NC_008321.1	1960540	1961550	D	PFAM: aminodeoxychorismate lyase; KEGG: son:SO2614 conserved hypothetical protein TIGR00247; aminodeoxychorismate lyase	1960540..1961550	Shewanella sp. MR-4	4252236
YP_733794.1	CDS	tmk	NC_008321.1	1961547	1962176	D	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase	1961547..1962176	Shewanella sp. MR-4	4252237
YP_733795.1	CDS	Shewmr4_1662	NC_008321.1	1962170	1963126	D	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: son:SO2612 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta'	1962170..1963126	Shewanella sp. MR-4	4252238
YP_733796.1	CDS	Shewmr4_1663	NC_008321.1	1963133	1963459	D	KEGG: son:SO2611 type IV pilus biogenesis protein pilZ; type IV pilus biogenesis protein pilZ	1963133..1963459	Shewanella sp. MR-4	4252239
YP_733797.1	CDS	Shewmr4_1664	NC_008321.1	1963806	1964606	D	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: son:SO2610 hydrolase, TatD family; TatD family hydrolase	1963806..1964606	Shewanella sp. MR-4	4252240
YP_733798.1	CDS	yebU	NC_008321.1	1964923	1966452	R	in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF	complement(1964923..1966452)	Shewanella sp. MR-4	4252241
YP_733799.1	CDS	Shewmr4_1666	NC_008321.1	1966515	1967741	D	PFAM: nucleoside recognition domain protein; KEGG: son:SO2607 spore maturation protein A-related protein; nucleoside recognition domain-containing protein	1966515..1967741	Shewanella sp. MR-4	4252242
YP_733800.1	CDS	Shewmr4_1667	NC_008321.1	1967920	1970556	R	PFAM: Mammalian cell entry related domain protein; KEGG: son:SO2606 PqiB family protein; hypothetical protein	complement(1967920..1970556)	Shewanella sp. MR-4	4252243
YP_733801.1	CDS	Shewmr4_1668	NC_008321.1	1970543	1971160	R	PFAM: Paraquat-inducible protein A; KEGG: sdn:Sden_1717 paraquat-inducible protein A; paraquat-inducible protein A	complement(1970543..1971160)	Shewanella sp. MR-4	4252244
YP_733802.1	CDS	Shewmr4_1669	NC_008321.1	1971163	1971798	R	PFAM: Paraquat-inducible protein A; KEGG: sdn:Sden_1718 paraquat-inducible protein A; paraquat-inducible protein A	complement(1971163..1971798)	Shewanella sp. MR-4	4252245
YP_733803.1	CDS	Shewmr4_1670	NC_008321.1	1972004	1972303	D	PFAM: YebG family protein; KEGG: son:SO2604 hypothetical protein; YebG family protein	1972004..1972303	Shewanella sp. MR-4	4252246
YP_733804.1	CDS	Shewmr4_1671	NC_008321.1	1972319	1972777	D	PFAM: GAF domain protein; KEGG: son:SO2603 GAF domain-containing protein; putative GAF sensor protein	1972319..1972777	Shewanella sp. MR-4	4252247
YP_733805.1	CDS	Shewmr4_1672	NC_008321.1	1973053	1973697	D	affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector	1973053..1973697	Shewanella sp. MR-4	4252248
YP_733806.1	CDS	Shewmr4_1673	NC_008321.1	1973726	1975777	D	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease	1973726..1975777	Shewanella sp. MR-4	4252249
YP_733807.1	CDS	pepN	NC_008321.1	1975861	1978410	D	TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO2600 aminopeptidase N; aminopeptidase N	1975861..1978410	Shewanella sp. MR-4	4252250
YP_733808.1	CDS	Shewmr4_1675	NC_008321.1	1978721	1978939	D	KEGG: son:SO2598 hypothetical protein; hypothetical protein	1978721..1978939	Shewanella sp. MR-4	4252251
YP_733809.1	CDS	Shewmr4_1676	NC_008321.1	1979275	1981317	D	PFAM: protein of unknown function DUF1302; KEGG: son:SO2597 hypothetical protein; hypothetical protein	1979275..1981317	Shewanella sp. MR-4	4252252
YP_733810.1	CDS	Shewmr4_1677	NC_008321.1	1981330	1982694	D	PFAM: protein of unknown function DUF1329; KEGG: son:SO2596 hypothetical protein; hypothetical protein	1981330..1982694	Shewanella sp. MR-4	4252253
YP_733811.1	CDS	Shewmr4_1678	NC_008321.1	1982749	1983759	D	KEGG: son:SO2595 BNR repeat protein; BNR repeat-containing protein	1982749..1983759	Shewanella sp. MR-4	4252254
YP_733812.1	CDS	Shewmr4_1679	NC_008321.1	1983791	1986106	D	KEGG: son:SO2594 hypothetical protein; hypothetical protein	1983791..1986106	Shewanella sp. MR-4	4252255
YP_733813.1	CDS	Shewmr4_1680	NC_008321.1	1986372	1991216	D	PFAM: NAD-glutamate dehydrogenase; KEGG: son:SO2593 hypothetical protein; glutamate dehydrogenase (NAD)	1986372..1991216	Shewanella sp. MR-4	4252256
YP_733814.1	CDS	Shewmr4_1681	NC_008321.1	1991279	1992298	D	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2	1991279..1992298	Shewanella sp. MR-4	4252257
YP_733815.1	CDS	Shewmr4_1682	NC_008321.1	1992499	1993032	D	PFAM: protein of unknown function DUF1379; KEGG: son:SO2591 hypothetical protein; hypothetical protein	1992499..1993032	Shewanella sp. MR-4	4252258
YP_733816.1	CDS	Shewmr4_1683	NC_008321.1	1993541	1996141	R	PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: son:SO2136 aldehyde-alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase	complement(1993541..1996141)	Shewanella sp. MR-4	4252259
YP_733817.1	CDS	Shewmr4_1684	NC_008321.1	1996459	1997091	D	PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: son:SO2137 multiple antibiotic resistance protein; hypothetical protein	1996459..1997091	Shewanella sp. MR-4	4252260
YP_733818.1	CDS	Shewmr4_1685	NC_008321.1	1997345	1999339	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: cps:CPS_1937 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	1997345..1999339	Shewanella sp. MR-4	4252261
YP_733819.1	CDS	Shewmr4_1686	NC_008321.1	1999986	2001221	D	PFAM: phage integrase family protein; KEGG: vvy:VV2262 phage integrase; phage integrase family protein	1999986..2001221	Shewanella sp. MR-4	4252262
YP_733820.1	CDS	Shewmr4_1688	NC_008321.1	2002389	2003429	D	KEGG: son:SO1441 hypothetical protein; hypothetical protein	2002389..2003429	Shewanella sp. MR-4	4252263
YP_733821.1	CDS	Shewmr4_1689	NC_008321.1	2003552	2003767	D	PFAM: Prophage CP4-57 regulatory; KEGG: ecj:JW2604 DNA-binding transcriptional activator; phage transcriptional regulator, AlpA	2003552..2003767	Shewanella sp. MR-4	4252264
YP_733822.1	CDS	Shewmr4_1690	NC_008321.1	2003786	2005285	D	KEGG: son:SO1442 hypothetical protein; hypothetical protein	2003786..2005285	Shewanella sp. MR-4	4252265
YP_733823.1	CDS	Shewmr4_1691	NC_008321.1	2005690	2006352	D	KEGG: son:SO1443 hypothetical protein; hypothetical protein	2005690..2006352	Shewanella sp. MR-4	4252266
YP_733824.1	CDS	Shewmr4_1692	NC_008321.1	2006525	2006809	R	PFAM: CopG domain protein DNA-binding domain protein; KEGG: son:SO1445 transcriptional regulator, CopG family; CopG family transcriptional regulator	complement(2006525..2006809)	Shewanella sp. MR-4	4252267
YP_733825.1	CDS	Shewmr4_1693	NC_008321.1	2007095	2007817	R	KEGG: son:SO1447 retinol acyltransferase domain protein; retinol acyltransferase domain-containing protein	complement(2007095..2007817)	Shewanella sp. MR-4	4252268
YP_733826.1	CDS	Shewmr4_1694	NC_008321.1	2007906	2008544	R	PFAM: phage integrase family protein; KEGG: son:SO1448 site-specific recombinase, phage integrase family; phage integrase family protein	complement(2007906..2008544)	Shewanella sp. MR-4	4252269
YP_733827.1	CDS	Shewmr4_1695	NC_008321.1	2008581	2008994	R	KEGG: son:SO1450 hypothetical protein; hypothetical protein	complement(2008581..2008994)	Shewanella sp. MR-4	4252270
YP_733828.1	CDS	Shewmr4_1696	NC_008321.1	2009184	2009597	R	KEGG: son:SO1451 hypothetical protein; hypothetical protein	complement(2009184..2009597)	Shewanella sp. MR-4	4252271
YP_733829.1	CDS	Shewmr4_1697	NC_008321.1	2009836	2010192	R	PFAM: YagBYeeUYfjZ family protein; KEGG: son:SO1453 hypothetical protein; hypothetical protein	complement(2009836..2010192)	Shewanella sp. MR-4	4252272
YP_733830.1	CDS	Shewmr4_1698	NC_008321.1	2010335	2010697	R	KEGG: son:SO1454 hypothetical protein; hypothetical protein	complement(2010335..2010697)	Shewanella sp. MR-4	4252273
YP_733831.1	CDS	Shewmr4_1699	NC_008321.1	2010738	2011232	R	TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: vfi:VFA0522 DNA repair protein RadC; DNA repair protein RadC	complement(2010738..2011232)	Shewanella sp. MR-4	4252274
YP_733832.1	CDS	Shewmr4_1700	NC_008321.1	2011355	2011549	D	PFAM: Prophage CP4-57 regulatory; KEGG: ilo:IL0640 predicted transcriptional regulator; phage transcriptional regulator, AlpA	2011355..2011549	Shewanella sp. MR-4	4252275
YP_733833.1	CDS	Shewmr4_1701	NC_008321.1	2011679	2013223	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: hch:HCH_05030 sigma 54-dependent transcriptional activator; sigma-54 dependent trancsriptional regulator	2011679..2013223	Shewanella sp. MR-4	4252276
YP_733834.1	CDS	Shewmr4_1702	NC_008321.1	2013300	2014829	D	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bth:BT0335 putative ATPase; ATPase	2013300..2014829	Shewanella sp. MR-4	4252277
YP_733835.1	CDS	Shewmr4_1703	NC_008321.1	2014822	2016405	D	SMART: von Willebrand factor, type A; KEGG: yps:YPTB0004 hypothetical protein; von Willebrand factor, type A	2014822..2016405	Shewanella sp. MR-4	4252278
YP_733836.1	CDS	Shewmr4_1704	NC_008321.1	2016419	2016952	D	KEGG: noc:Noc_0407 hypothetical protein; hypothetical protein	2016419..2016952	Shewanella sp. MR-4	4252279
YP_733837.1	CDS	Shewmr4_1705	NC_008321.1	2017257	2017937	D	hypothetical protein	2017257..2017937	Shewanella sp. MR-4	4252280
YP_733838.1	CDS	Shewmr4_1706	NC_008321.1	2018034	2018801	D	KEGG: sde:Sde_2759 hypothetical protein; hypothetical protein	2018034..2018801	Shewanella sp. MR-4	4252281
YP_733839.1	CDS	Shewmr4_1707	NC_008321.1	2018806	2019348	D	KEGG: mta:Moth_2243 hypothetical protein; hypothetical protein	2018806..2019348	Shewanella sp. MR-4	4252282
YP_733840.1	CDS	Shewmr4_1708	NC_008321.1	2019364	2022837	D	KEGG: sde:Sde_2757 hypothetical protein; hypothetical protein	2019364..2022837	Shewanella sp. MR-4	4252283
YP_733841.1	CDS	Shewmr4_1709	NC_008321.1	2022951	2026415	D	KEGG: sde:Sde_2756 hypothetical protein; hypothetical protein	2022951..2026415	Shewanella sp. MR-4	4252284
YP_733842.1	CDS	Shewmr4_1710	NC_008321.1	2026421	2028109	D	PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: eca:ECA3659 hypothetical protein; hypothetical protein	2026421..2028109	Shewanella sp. MR-4	4252285
YP_733843.1	CDS	Shewmr4_1711	NC_008321.1	2028096	2030135	D	KEGG: sde:Sde_2753 hypothetical protein; hypothetical protein	2028096..2030135	Shewanella sp. MR-4	4252286
YP_733844.1	CDS	Shewmr4_1712	NC_008321.1	2030145	2030861	D	PFAM: Zeta toxin family protein; KEGG: pha:PSHAa0327 hypothetical protein; zeta toxin family protein	2030145..2030861	Shewanella sp. MR-4	4252287
YP_733845.1	CDS	Shewmr4_1713	NC_008321.1	2030873	2031034	D	hypothetical protein	2030873..2031034	Shewanella sp. MR-4	4252288
YP_733846.1	CDS	Shewmr4_1714	NC_008321.1	2031076	2032929	R	hypothetical protein	complement(2031076..2032929)	Shewanella sp. MR-4	4252289
YP_733847.1	CDS	Shewmr4_1715	NC_008321.1	2032944	2034944	R	hypothetical protein	complement(2032944..2034944)	Shewanella sp. MR-4	4252290
YP_733848.1	CDS	Shewmr4_1716	NC_008321.1	2035554	2038751	D	KEGG: pcr:Pcryo_0920 putative ATP-binding protein; ATPase-like protein	2035554..2038751	Shewanella sp. MR-4	4252291
YP_733849.1	CDS	Shewmr4_1717	NC_008321.1	2038769	2039461	D	hypothetical protein	2038769..2039461	Shewanella sp. MR-4	4252292
YP_733850.1	CDS	Shewmr4_1718	NC_008321.1	2039666	2040511	D	hypothetical protein	2039666..2040511	Shewanella sp. MR-4	4252293
YP_733851.1	CDS	Shewmr4_1719	NC_008321.1	2040504	2041457	D	hypothetical protein	2040504..2041457	Shewanella sp. MR-4	4252294
YP_733852.1	CDS	Shewmr4_1720	NC_008321.1	2041581	2044496	D	KEGG: dps:DP1989 hypothetical protein; hypothetical protein	2041581..2044496	Shewanella sp. MR-4	4252295
YP_733853.1	CDS	Shewmr4_1721	NC_008321.1	2044607	2045251	D	KEGG: pcr:Pcryo_0917 hypothetical protein; hypothetical protein	2044607..2045251	Shewanella sp. MR-4	4252296
YP_733854.1	CDS	Shewmr4_1722	NC_008321.1	2046005	2047732	D	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: vpa:VP0880 hypothetical protein; type 12 methyltransferase	2046005..2047732	Shewanella sp. MR-4	4252297
YP_733855.1	CDS	Shewmr4_1723	NC_008321.1	2048052	2048975	D	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase; IS4 family transposase	2048052..2048975	Shewanella sp. MR-4	4252298
YP_733856.1	CDS	Shewmr4_1725	NC_008321.1	2050112	2051488	R	KEGG: son:SO2248 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine ammonia-lyase	complement(2050112..2051488)	Shewanella sp. MR-4	4252299
YP_733857.1	CDS	Shewmr4_1726	NC_008321.1	2051873	2052901	D	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase	2051873..2052901	Shewanella sp. MR-4	4252300
YP_733858.1	CDS	Shewmr4_1727	NC_008321.1	2052983	2053522	D	PFAM: protein of unknown function UPF0227; KEGG: son:SO2251 conserved hypothetical protein; hypothetical protein	2052983..2053522	Shewanella sp. MR-4	4252301
YP_733859.1	CDS	Shewmr4_1728	NC_008321.1	2054107	2054379	D	catalyzes the hydrolysis of acylphosphate; acylphosphatase	2054107..2054379	Shewanella sp. MR-4	4252302
YP_733860.1	CDS	Shewmr4_1729	NC_008321.1	2054507	2055538	R	KEGG: son:SO2254 hypothetical protein; hypothetical protein	complement(2054507..2055538)	Shewanella sp. MR-4	4252303
YP_733861.1	CDS	Shewmr4_1730	NC_008321.1	2055538	2059020	R	TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO2255 transcription-repair coupling factor; transcription-repair coupling factor	complement(2055538..2059020)	Shewanella sp. MR-4	4252304
YP_733862.1	CDS	Shewmr4_1731	NC_008321.1	2059107	2059724	R	KEGG: son:SO2256 hypothetical protein; hypothetical protein	complement(2059107..2059724)	Shewanella sp. MR-4	4252305
YP_733863.1	CDS	Shewmr4_1732	NC_008321.1	2059819	2061051	D	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: son:SO2257 lipoprotein releasing system transmembrane protein LolE; LolC/E family lipoprotein releasing system, transmembrane protein	2059819..2061051	Shewanella sp. MR-4	4252306
YP_733864.1	CDS	Shewmr4_1733	NC_008321.1	2061083	2061844	D	KEGG: son:SO2258 lipoprotein releasing system ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein	2061083..2061844	Shewanella sp. MR-4	4252307
YP_733865.1	CDS	Shewmr4_1734	NC_008321.1	2061841	2063091	D	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: son:SO2259 lipoprotein releasing system transmembrane protein LolC, putative; LolC/E family lipoprotein releasing system, transmembrane protein	2061841..2063091	Shewanella sp. MR-4	4252308
YP_733866.1	CDS	Shewmr4_1735	NC_008321.1	2063220	2064023	R	PFAM: inositol monophosphatase; KEGG: son:SO2260 extragenic suppressor protein SuhB; inositol-phosphate phosphatase	complement(2063220..2064023)	Shewanella sp. MR-4	4252309
YP_733867.1	CDS	Shewmr4_1736	NC_008321.1	2064178	2064903	D	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO2261 RNA methyltransferase, TrmH family, group 1; RNA methyltransferase	2064178..2064903	Shewanella sp. MR-4	4252310
YP_733868.1	CDS	Shewmr4_1737	NC_008321.1	2064949	2065770	D	TIGRFAM: serine O-acetyltransferase; KEGG: son:SO2262 serine acetyltransferase; serine O-acetyltransferase	2064949..2065770	Shewanella sp. MR-4	4252311
YP_733869.1	CDS	Shewmr4_1738	NC_008321.1	2066120	2066581	D	TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: son:SO2263 Rrf2 family protein; BadM/Rrf2 family transcriptional regulator	2066120..2066581	Shewanella sp. MR-4	4252312
YP_733870.1	CDS	Shewmr4_1739	NC_008321.1	2066660	2067874	D	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase	2066660..2067874	Shewanella sp. MR-4	4252313
YP_733871.1	CDS	Shewmr4_1740	NC_008321.1	2067912	2068295	D	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: son:SO2265 NifU family protein; scaffold protein	2067912..2068295	Shewanella sp. MR-4	4252314
YP_733872.1	CDS	Shewmr4_1741	NC_008321.1	2068310	2068633	D	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: son:SO2266 HesB/YadR/YfhF family protein; iron-sulfur cluster assembly protein IscA	2068310..2068633	Shewanella sp. MR-4	4252315
YP_733873.1	CDS	hscB	NC_008321.1	2068649	2069173	D	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB	2068649..2069173	Shewanella sp. MR-4	4252316
YP_733874.1	CDS	hscA	NC_008321.1	2069241	2071103	D	involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA	2069241..2071103	Shewanella sp. MR-4	4252317
YP_733875.1	CDS	Shewmr4_1744	NC_008321.1	2071112	2071447	D	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: son:SO2269 ferredoxin, 2Fe-2S; ferredoxin, 2Fe-2S type, ISC system	2071112..2071447	Shewanella sp. MR-4	4252318
YP_733876.1	CDS	Shewmr4_1745	NC_008321.1	2071603	2072502	D	TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO2270 ribosomal protein S6 modification protein; SSU ribosomal protein S6P modification protein	2071603..2072502	Shewanella sp. MR-4	4252319
YP_733877.1	CDS	Shewmr4_1746	NC_008321.1	2072571	2072768	D	PFAM: protein of unknown function DUF528; KEGG: son:SO2271 hypothetical protein; hypothetical protein	2072571..2072768	Shewanella sp. MR-4	4252320
YP_733878.1	CDS	ndk	NC_008321.1	2073354	2073785	D	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase	2073354..2073785	Shewanella sp. MR-4	4252321
YP_733879.1	CDS	Shewmr4_1748	NC_008321.1	2074099	2074542	D	PFAM: heat shock protein Hsp20; KEGG: son:SO2277 16 kDa heat shock protein A; heat shock protein Hsp20	2074099..2074542	Shewanella sp. MR-4	4252322
YP_733880.1	CDS	ilvH	NC_008321.1	2074674	2075168	R	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit	complement(2074674..2075168)	Shewanella sp. MR-4	4252323
YP_733881.1	CDS	Shewmr4_1750	NC_008321.1	2075168	2076886	R	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: son:SO2279 acetolactate synthase large subunit; acetolactate synthase 3 catalytic subunit	complement(2075168..2076886)	Shewanella sp. MR-4	4252324
YP_733882.1	CDS	Shewmr4_1751	NC_008321.1	2077337	2078560	R	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2280 bicyclomycin resistance protein; Bcr/CflA subfamily drug resistance transporter	complement(2077337..2078560)	Shewanella sp. MR-4	4252325
YP_733883.1	CDS	Shewmr4_1752	NC_008321.1	2079053	2080927	D	KEGG: son:SO2281 alkaline phosphatase; alkaline phosphatase	2079053..2080927	Shewanella sp. MR-4	4252326
YP_733884.1	CDS	Shewmr4_1753	NC_008321.1	2081060	2082418	R	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: son:SO2282 transcriptional regulator, GntR family; GntR family transcriptional regulator	complement(2081060..2082418)	Shewanella sp. MR-4	4252327
YP_733885.1	CDS	Shewmr4_1754	NC_008321.1	2082510	2083136	D	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO2285 hypothetical protein; lysine exporter protein LysE/YggA	2082510..2083136	Shewanella sp. MR-4	4252328
YP_733886.1	CDS	Shewmr4_1755	NC_008321.1	2083330	2085087	D	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO2286 sulfate permease family protein; sulfate transporter	2083330..2085087	Shewanella sp. MR-4	4252329
YP_733887.1	CDS	Shewmr4_1756	NC_008321.1	2085137	2085940	R	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	complement(2085137..2085940)	Shewanella sp. MR-4	4252330
YP_733888.1	CDS	Shewmr4_1757	NC_008321.1	2085970	2086365	R	KEGG: dde:Dde_2987 transposase; transposase	complement(2085970..2086365)	Shewanella sp. MR-4	4252331
YP_733889.1	CDS	Shewmr4_1758	NC_008321.1	2086506	2086730	R	KEGG: sdn:Sden_2314 hypothetical protein; hypothetical protein	complement(2086506..2086730)	Shewanella sp. MR-4	4252332
YP_733890.1	CDS	Shewmr4_1759	NC_008321.1	2086852	2087523	R	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO2288 glutathione-S-transferase domain protein; glutathione S-transferase domain-containing protein	complement(2086852..2087523)	Shewanella sp. MR-4	4252333
YP_733891.1	CDS	Shewmr4_1760	NC_008321.1	2087794	2088786	D	PFAM: Rhodanese domain protein; KEGG: son:SO2290 rhodanese domain protein; hypothetical protein	2087794..2088786	Shewanella sp. MR-4	4252334
YP_733892.1	CDS	Shewmr4_1761	NC_008321.1	2088981	2089445	D	KEGG: son:SO2291 hypothetical protein; hypothetical protein	2088981..2089445	Shewanella sp. MR-4	4252335
YP_733893.1	CDS	Shewmr4_1762	NC_008321.1	2089533	2089895	D	KEGG: son:SO2234 hypothetical protein; hypothetical protein	2089533..2089895	Shewanella sp. MR-4	4252336
YP_733894.1	CDS	Shewmr4_1763	NC_008321.1	2090044	2090553	R	functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit	complement(2090044..2090553)	Shewanella sp. MR-4	4252337
YP_733895.1	CDS	Shewmr4_1764	NC_008321.1	2090626	2092329	R	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: son:SO2237 phosphotransferase system, enzyme I; phosphoenolpyruvate--protein phosphotransferase	complement(2090626..2092329)	Shewanella sp. MR-4	4252338
YP_733896.1	CDS	Shewmr4_1765	NC_008321.1	2092362	2092619	R	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: son:SO2238 phosphocarrier protein HPr; HPr family phosphocarrier protein	complement(2092362..2092619)	Shewanella sp. MR-4	4252339
YP_733897.1	CDS	Shewmr4_1766	NC_008321.1	2092643	2093038	R	KEGG: son:SO2239 hypothetical protein; hypothetical protein	complement(2092643..2093038)	Shewanella sp. MR-4	4252340
YP_733898.1	CDS	Shewmr4_1767	NC_008321.1	2093210	2094847	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: son:SO2240 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(2093210..2094847)	Shewanella sp. MR-4	4252341
YP_733899.1	CDS	Shewmr4_1768	NC_008321.1	2095195	2095923	D	KEGG: son:SO2241 hypothetical protein; hypothetical protein	2095195..2095923	Shewanella sp. MR-4	4252342
YP_733900.1	CDS	Shewmr4_1769	NC_008321.1	2096145	2097185	D	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: son:SO2244 transcriptional regulator, LacI family; LacI family transcription regulator	2096145..2097185	Shewanella sp. MR-4	4252343
YP_733901.1	CDS	Shewmr4_1770	NC_008321.1	2097298	2097987	R	KEGG: son:SO2245 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon	complement(2097298..2097987)	Shewanella sp. MR-4	4252344
YP_733902.1	CDS	Shewmr4_1771	NC_008321.1	2098106	2098468	R	KEGG: sdn:Sden_1373 methyltransferase type 12; hypothetical protein	complement(2098106..2098468)	Shewanella sp. MR-4	4252345
YP_733903.1	CDS	Shewmr4_1772	NC_008321.1	2098549	2098929	R	KEGG: son:SO2146 hypothetical protein; hypothetical protein	complement(2098549..2098929)	Shewanella sp. MR-4	4252346
YP_733904.1	CDS	Shewmr4_1773	NC_008321.1	2098997	2101117	R	TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: son:SO2147 exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha	complement(2098997..2101117)	Shewanella sp. MR-4	4252347
YP_733905.1	CDS	Shewmr4_1774	NC_008321.1	2101114	2104938	R	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: son:SO2148 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta	complement(2101114..2104938)	Shewanella sp. MR-4	4252348
YP_733906.1	CDS	Shewmr4_1775	NC_008321.1	2104938	2108648	R	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: son:SO2149 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma	complement(2104938..2108648)	Shewanella sp. MR-4	4252349
YP_733907.1	CDS	Shewmr4_1776	NC_008321.1	2108758	2110905	R	PFAM: transglutaminase domain protein; KEGG: son:SO2150 transglutaminase family protein; transglutaminase domain-containing protein	complement(2108758..2110905)	Shewanella sp. MR-4	4252350
YP_733908.1	CDS	Shewmr4_1777	NC_008321.1	2110902	2111987	R	PFAM: protein of unknown function DUF58; KEGG: son:SO2151 hypothetical protein; hypothetical protein	complement(2110902..2111987)	Shewanella sp. MR-4	4252351
YP_733909.1	CDS	Shewmr4_1778	NC_008321.1	2112038	2112949	R	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: son:SO2153 MoxR protein; ATPase	complement(2112038..2112949)	Shewanella sp. MR-4	4252352
YP_733910.1	CDS	Shewmr4_1779	NC_008321.1	2113374	2114390	D	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein	2113374..2114390	Shewanella sp. MR-4	4252353
YP_733911.1	CDS	Shewmr4_1780	NC_008321.1	2114613	2115536	R	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase; IS4 family transposase	complement(2114613..2115536)	Shewanella sp. MR-4	4252354
YP_733912.1	CDS	Shewmr4_1781	NC_008321.1	2115588	2115935	R	KEGG: sdn:Sden_3235 DNA-directed DNA polymerase; DNA repair nucleotidyltransferase/DNA polymerase-like protein	complement(2115588..2115935)	Shewanella sp. MR-4	4252355
YP_733913.1	CDS	Shewmr4_1782	NC_008321.1	2115923	2116747	R	PFAM: peptidase S24, S26A and S26B; KEGG: son:SOA0013 umuD protein; putative prophage repressor	complement(2115923..2116747)	Shewanella sp. MR-4	4252356
YP_733914.1	CDS	Shewmr4_1783	NC_008321.1	2116842	2117486	R	PFAM: protein of unknown function DUF938; KEGG: son:SO2050 hypothetical protein; hypothetical protein	complement(2116842..2117486)	Shewanella sp. MR-4	4252357
YP_733915.1	CDS	Shewmr4_1784	NC_008321.1	2117757	2119046	D	PFAM: FAD dependent oxidoreductase; KEGG: son:SO2052 hypothetical oxidoreductase; FAD dependent oxidoreductase	2117757..2119046	Shewanella sp. MR-4	4252358
YP_733916.1	CDS	Shewmr4_1785	NC_008321.1	2119131	2120012	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2053 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(2119131..2120012)	Shewanella sp. MR-4	4252359
YP_733917.1	CDS	Shewmr4_1786	NC_008321.1	2120209	2121348	D	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO2054 alcohol dehydrogenase class III; alcohol dehydrogenase	2120209..2121348	Shewanella sp. MR-4	4252360
YP_733918.1	CDS	Shewmr4_1787	NC_008321.1	2121476	2122315	D	PFAM: putative esterase; KEGG: son:SO2055 esterase, putative; carboxylesterase	2121476..2122315	Shewanella sp. MR-4	4252361
YP_733919.1	CDS	Shewmr4_1788	NC_008321.1	2122605	2123285	D	PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: hch:HCH_03035 secreted trypsin-like serine protease; peptidase S1 and S6, chymotrypsin/Hap	2122605..2123285	Shewanella sp. MR-4	4252362
YP_733920.1	CDS	Shewmr4_1789	NC_008321.1	2123446	2123796	R	PFAM: Uncharacterized conserved protein UCP025560; KEGG: son:SO2062 hypothetical protein; hypothetical protein	complement(2123446..2123796)	Shewanella sp. MR-4	4252363
YP_733921.1	CDS	Shewmr4_1790	NC_008321.1	2123821	2124021	R	KEGG: son:SO2063 hypothetical protein; hypothetical protein	complement(2123821..2124021)	Shewanella sp. MR-4	4252364
YP_733922.1	CDS	Shewmr4_1791	NC_008321.1	2124035	2127247	R	KEGG: son:SO2064 hypothetical protein; hypothetical protein	complement(2124035..2127247)	Shewanella sp. MR-4	4252365
YP_733923.1	CDS	Shewmr4_1792	NC_008321.1	2127505	2128692	R	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: son:SO2065 tyrosine-specific transport protein; aromatic amino acid transporter	complement(2127505..2128692)	Shewanella sp. MR-4	4252366
YP_733924.1	CDS	Shewmr4_1793	NC_008321.1	2129420	2130079	R	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein	complement(2129420..2130079)	Shewanella sp. MR-4	4252367
YP_733925.1	CDS	Shewmr4_1794	NC_008321.1	2130124	2130897	R	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF	complement(2130124..2130897)	Shewanella sp. MR-4	4252368
YP_733926.1	CDS	Shewmr4_1795	NC_008321.1	2130879	2131616	R	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase	complement(2130879..2131616)	Shewanella sp. MR-4	4252369
YP_733927.1	CDS	hisH	NC_008321.1	2131748	2132398	R	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH	complement(2131748..2132398)	Shewanella sp. MR-4	4252370
YP_733928.1	CDS	Shewmr4_1797	NC_008321.1	2132545	2133636	R	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase	complement(2132545..2133636)	Shewanella sp. MR-4	4252371
YP_733929.1	CDS	Shewmr4_1798	NC_008321.1	2133719	2134909	R	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase	complement(2133719..2134909)	Shewanella sp. MR-4	4252372
YP_733930.1	CDS	hisD	NC_008321.1	2134976	2136277	R	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase	complement(2134976..2136277)	Shewanella sp. MR-4	4252373
YP_733931.1	CDS	hisG	NC_008321.1	2136281	2137279	R	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase	complement(2136281..2137279)	Shewanella sp. MR-4	4252374
YP_733932.1	CDS	Shewmr4_1801	NC_008321.1	2137844	2138671	R	KEGG: son:SO2075 hypothetical protein; hypothetical protein	complement(2137844..2138671)	Shewanella sp. MR-4	4252375
YP_733933.1	CDS	Shewmr4_1802	NC_008321.1	2138737	2139063	R	KEGG: son:SO2076 hypothetical protein; hypothetical protein	complement(2138737..2139063)	Shewanella sp. MR-4	4252376
YP_733934.1	CDS	Shewmr4_1803	NC_008321.1	2139118	2139570	R	KEGG: son:SO2077 acyltransferase domain protein; acyltransferase domain-containing protein	complement(2139118..2139570)	Shewanella sp. MR-4	4252377
YP_733935.1	CDS	Shewmr4_1804	NC_008321.1	2139658	2139999	R	KEGG: son:SO2079 hypothetical protein; hypothetical protein	complement(2139658..2139999)	Shewanella sp. MR-4	4252378
YP_733936.1	CDS	Shewmr4_1805	NC_008321.1	2140302	2142281	D	SMART: helicase c2; KEGG: son:SO2081 ATP-dependent helicase, DinG family; helicase c2	2140302..2142281	Shewanella sp. MR-4	4252379
YP_733937.1	CDS	Shewmr4_1806	NC_008321.1	2142356	2144305	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ppr:PBPRB1825 hypothetical receptor; TonB-dependent receptor	complement(2142356..2144305)	Shewanella sp. MR-4	4252380
YP_733938.1	CDS	Shewmr4_1807	NC_008321.1	2144663	2146180	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO2083 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(2144663..2146180)	Shewanella sp. MR-4	4252381
YP_733939.1	CDS	pheS	NC_008321.1	2146615	2147634	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha	2146615..2147634	Shewanella sp. MR-4	4252382
YP_733940.1	CDS	pheT	NC_008321.1	2147649	2150036	D	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta	2147649..2150036	Shewanella sp. MR-4	4252383
YP_733941.1	CDS	ihfA	NC_008321.1	2150040	2150336	D	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha	2150040..2150336	Shewanella sp. MR-4	4252384
YP_733942.1	CDS	Shewmr4_1811	NC_008321.1	2150433	2151371	D	Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase	2150433..2151371	Shewanella sp. MR-4	4252385
YP_733943.1	CDS	Shewmr4_1812	NC_008321.1	2151485	2151841	R	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: son:SO2089 hydrogenase expression/formation protein HypA; hydrogenase nickel insertion protein HypA	complement(2151485..2151841)	Shewanella sp. MR-4	4252386
YP_733944.1	CDS	Shewmr4_1813	NC_008321.1	2151841	2152860	R	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: son:SO2090 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE	complement(2151841..2152860)	Shewanella sp. MR-4	4252387
YP_733945.1	CDS	Shewmr4_1814	NC_008321.1	2152853	2153992	R	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: son:SO2091 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD	complement(2152853..2153992)	Shewanella sp. MR-4	4252388
YP_733946.1	CDS	Shewmr4_1815	NC_008321.1	2154052	2154297	R	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: son:SO2092 hydrogenase assembly chaperone hypC/hupF; hydrogenase assembly chaperone hypC/hupF	complement(2154052..2154297)	Shewanella sp. MR-4	4252389
YP_733947.1	CDS	Shewmr4_1816	NC_008321.1	2154297	2155058	R	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: son:SO2093 hydrogenase accessory protein HypB; hydrogenase accessory protein HypB	complement(2154297..2155058)	Shewanella sp. MR-4	4252390
YP_733948.1	CDS	Shewmr4_1817	NC_008321.1	2155296	2157806	R	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain protein; zinc finger, HypF domain protein; KEGG: son:SO2094 hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF	complement(2155296..2157806)	Shewanella sp. MR-4	4252391
YP_733949.1	CDS	Shewmr4_1818	NC_008321.1	2157878	2159728	R	KEGG: son:SO2095 hypothetical protein; hypothetical protein	complement(2157878..2159728)	Shewanella sp. MR-4	4252392
YP_733950.1	CDS	Shewmr4_1819	NC_008321.1	2159709	2160287	R	TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52, hydrogen uptake protein; KEGG: son:SO2096 hydrogenase expression/formation protein; hydrogenase expression/formation protein	complement(2159709..2160287)	Shewanella sp. MR-4	4252393
YP_733951.1	CDS	Shewmr4_1820	NC_008321.1	2160295	2160969	R	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: son:SO2097 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit	complement(2160295..2160969)	Shewanella sp. MR-4	4252394
YP_733952.1	CDS	Shewmr4_1821	NC_008321.1	2160991	2162694	R	PFAM: nickel-dependent hydrogenase, large subunit; KEGG: son:SO2098 hydrogenase large chain; nickel-dependent hydrogenase, large subunit	complement(2160991..2162694)	Shewanella sp. MR-4	4252395
YP_733953.1	CDS	Shewmr4_1822	NC_008321.1	2162698	2163834	R	KEGG: son:SO2099 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; Twin-arginine translocation pathway signal; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA	complement(2162698..2163834)	Shewanella sp. MR-4	4252396
YP_733954.1	CDS	Shewmr4_1823	NC_008321.1	2164185	2164652	D	PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: son:SO2100 thioredoxin family protein; redoxin domain-containing protein	2164185..2164652	Shewanella sp. MR-4	4252397
YP_733955.1	CDS	Shewmr4_1824	NC_008321.1	2164656	2164877	D	KEGG: son:SO2101 lipoprotein, putative; putative lipoprotein	2164656..2164877	Shewanella sp. MR-4	4252398
YP_733956.1	CDS	Shewmr4_1825	NC_008321.1	2164970	2166316	D	KEGG: son:SO2102 hypothetical protein; hypothetical protein	2164970..2166316	Shewanella sp. MR-4	4252399
YP_733957.1	CDS	Shewmr4_1826	NC_008321.1	2166419	2167321	D	PFAM: ApbE family lipoprotein; KEGG: son:SO2103 ApbE family protein; ApbE family lipoprotein	2166419..2167321	Shewanella sp. MR-4	4252400
YP_733958.1	CDS	Shewmr4_1827	NC_008321.1	2167332	2167991	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2104 DNA-binding response regulator YgiX, putative; two component transcriptional regulator	2167332..2167991	Shewanella sp. MR-4	4252401
YP_733959.1	CDS	Shewmr4_1828	NC_008321.1	2168105	2169505	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2105 sensor protein YgiY, putative; periplasmic sensor signal transduction histidine kinase	2168105..2169505	Shewanella sp. MR-4	4252402
YP_733960.1	CDS	mdoG	NC_008321.1	2169932	2171569	D	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G	2169932..2171569	Shewanella sp. MR-4	4252403
YP_733961.1	CDS	Shewmr4_1830	NC_008321.1	2171593	2173776	D	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH	2171593..2173776	Shewanella sp. MR-4	4252404
YP_733962.1	CDS	Shewmr4_1831	NC_008321.1	2174007	2175635	D	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO2109 hypothetical protein; peptidoglycan binding domain-containing protein	2174007..2175635	Shewanella sp. MR-4	4252405
YP_733963.1	CDS	Shewmr4_1832	NC_008321.1	2175759	2176307	D	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: son:SO2110 hypothetical protein; hypothetical protein	2175759..2176307	Shewanella sp. MR-4	4252406
YP_733964.1	CDS	Shewmr4_1833	NC_008321.1	2176258	2176692	R	KEGG: son:SO2111 hypothetical protein; hypothetical protein	complement(2176258..2176692)	Shewanella sp. MR-4	4252407
YP_733965.1	CDS	Shewmr4_1834	NC_008321.1	2177005	2177292	D	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25	2177005..2177292	Shewanella sp. MR-4	4252408
YP_733966.1	CDS	Shewmr4_1835	NC_008321.1	2177400	2181608	R	PFAM: protein of unknown function DUF490; KEGG: son:SO2113 hypothetical protein; hypothetical protein	complement(2177400..2181608)	Shewanella sp. MR-4	4252409
YP_733967.1	CDS	Shewmr4_1836	NC_008321.1	2181605	2183380	R	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: son:SO2114 hypothetical protein; surface antigen (D15)	complement(2181605..2183380)	Shewanella sp. MR-4	4252410
YP_733968.1	CDS	Shewmr4_1837	NC_008321.1	2183582	2184613	D	PFAM: peptidase T2, asparaginase 2; KEGG: son:SO2115 asparaginase family protein; peptidase T2, asparaginase 2	2183582..2184613	Shewanella sp. MR-4	4252411
YP_733969.1	CDS	Shewmr4_1838	NC_008321.1	2184865	2185281	D	PFAM: CBS domain containing protein; KEGG: son:SO2228 CBS domain protein; signal transduction protein	2184865..2185281	Shewanella sp. MR-4	4252412
YP_733970.1	CDS	Shewmr4_1839	NC_008321.1	2185410	2189291	D	KEGG: son:SO2229 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD/DEAH box helicase domain protein; ATP-dependent helicase HrpA	2185410..2189291	Shewanella sp. MR-4	4252413
YP_733971.1	CDS	Shewmr4_1840	NC_008321.1	2190017	2190175	D	PFAM: periplasmic nitrate reductase NapE; KEGG: sdn:Sden_1495 periplasmic nitrate reductase NapE; periplasmic nitrate reductase NapE	2190017..2190175	Shewanella sp. MR-4	4252414
YP_733972.1	CDS	Shewmr4_1841	NC_008321.1	2190217	2190474	D	PFAM: NapD family protein; KEGG: sdn:Sden_1496 NapD; NapD family protein	2190217..2190474	Shewanella sp. MR-4	4252415
YP_733973.1	CDS	Shewmr4_1842	NC_008321.1	2190477	2192966	D	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit	2190477..2192966	Shewanella sp. MR-4	4252416
YP_733974.1	CDS	Shewmr4_1843	NC_008321.1	2192977	2193462	D	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sdn:Sden_1498 nitrate reductase cytochrome c-type subunit (NapB); periplasmic nitrate reductase subunit NapB	2192977..2193462	Shewanella sp. MR-4	4252417
YP_733975.1	CDS	Shewmr4_1844	NC_008321.1	2193471	2194058	D	TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: sdn:Sden_1499 periplasmic nitrate reductase C-type cytochrome, NapC/NirT; periplasmic nitrate reductase subunit NapC	2193471..2194058	Shewanella sp. MR-4	4252418
YP_733976.1	CDS	Shewmr4_1845	NC_008321.1	2194609	2195094	D	KEGG: dps:DP0411 hypothetical protein; hypothetical protein	2194609..2195094	Shewanella sp. MR-4	4252419
YP_733977.1	CDS	Shewmr4_1846	NC_008321.1	2195186	2196955	D	KEGG: fnu:FN0185 predicted ATP-dependent endonuclease of the OLD family; ATP-dependent OLD family endonuclease	2195186..2196955	Shewanella sp. MR-4	4252420
YP_733978.1	CDS	Shewmr4_1847	NC_008321.1	2197038	2197571	D	PFAM: isochorismatase hydrolase; KEGG: rme:Rmet_5659 isochorismatase hydrolase; isochorismatase hydrolase	2197038..2197571	Shewanella sp. MR-4	4252421
YP_733979.1	CDS	Shewmr4_1848	NC_008321.1	2197652	2198305	D	KEGG: pae:PA2504 hypothetical protein; hypothetical protein	2197652..2198305	Shewanella sp. MR-4	4252422
YP_733980.1	CDS	Shewmr4_1849	NC_008321.1	2198411	2198833	D	PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_06505 histone acetyltransferase HPA2/related acetyltransferase; GCN5-related N-acetyltransferase	2198411..2198833	Shewanella sp. MR-4	4252423
YP_733981.1	CDS	Shewmr4_1850	NC_008321.1	2199205	2199441	R	KEGG: son:SO2479 hypothetical protein; hypothetical protein	complement(2199205..2199441)	Shewanella sp. MR-4	4252424
YP_733982.1	CDS	Shewmr4_1851	NC_008321.1	2199470	2200207	R	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase	complement(2199470..2200207)	Shewanella sp. MR-4	4252425
YP_733983.1	CDS	Shewmr4_1852	NC_008321.1	2200290	2201360	R	PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO2477 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase	complement(2200290..2201360)	Shewanella sp. MR-4	4252426
YP_733984.1	CDS	Shewmr4_1853	NC_008321.1	2201380	2202567	R	PFAM: aminotransferase, class V; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO2476 polysaccharide biosynthesis protein; DegT/DnrJ/EryC1/StrS aminotransferase	complement(2201380..2202567)	Shewanella sp. MR-4	4252427
YP_733985.1	CDS	Shewmr4_1854	NC_008321.1	2202957	2203562	R	PFAM: carbonic anhydrase; KEGG: son:SO2474 carbonic anhydrase family protein; carbonate dehydratase	complement(2202957..2203562)	Shewanella sp. MR-4	4252428
YP_733986.1	CDS	Shewmr4_1855	NC_008321.1	2203716	2204546	R	PFAM: alpha/beta hydrolase fold; KEGG: son:SO2473 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein	complement(2203716..2204546)	Shewanella sp. MR-4	4252429
YP_733987.1	CDS	Shewmr4_1856	NC_008321.1	2204612	2205424	R	PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: son:SO2472 D-alanyl-D-alanine carboxypeptidase-related protein; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins	complement(2204612..2205424)	Shewanella sp. MR-4	4252430
YP_733988.1	CDS	Shewmr4_1857	NC_008321.1	2205418	2206563	R	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase	complement(2205418..2206563)	Shewanella sp. MR-4	4252431
YP_733989.1	CDS	Shewmr4_1858	NC_008321.1	2206560	2206964	R	TIGRFAM: conserved hypothetical protein; PFAM: arsenate reductase and related; KEGG: son:SO2470 hypothetical protein; hypothetical protein	complement(2206560..2206964)	Shewanella sp. MR-4	4252432
YP_733990.1	CDS	Shewmr4_1859	NC_008321.1	2207398	2210070	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: vvy:VV0250 outer membrane receptor protein; TonB-dependent receptor	complement(2207398..2210070)	Shewanella sp. MR-4	4252433
YP_733991.1	CDS	Shewmr4_1860	NC_008321.1	2210871	2211776	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vpa:VPA0365 putative transcriptional regulator protein; LysR family transcriptional regulator	2210871..2211776	Shewanella sp. MR-4	4252434
YP_733992.1	CDS	Shewmr4_1861	NC_008321.1	2211862	2212974	D	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: vpa:VPA0364 putative efflux protein; RND family efflux transporter MFP subunit	2211862..2212974	Shewanella sp. MR-4	4252435
YP_733993.1	CDS	Shewmr4_1862	NC_008321.1	2212971	2216078	D	PFAM: acriflavin resistance protein; KEGG: vpa:VPA0363 putative efflux protein; acriflavin resistance protein	2212971..2216078	Shewanella sp. MR-4	4252436
YP_733994.1	CDS	Shewmr4_1863	NC_008321.1	2216081	2217550	D	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: vpa:VPA0362 putative outer membrane protein; RND efflux system outer membrane lipoprotein	2216081..2217550	Shewanella sp. MR-4	4252437
YP_733995.1	CDS	Shewmr4_1864	NC_008321.1	2217673	2218953	D	TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: vpa:VP2017 paraquat-inducible protein A; PqiA family integral membrane protein	2217673..2218953	Shewanella sp. MR-4	4252438
YP_733996.1	CDS	Shewmr4_1865	NC_008321.1	2218970	2220634	D	PFAM: Mammalian cell entry related domain protein; KEGG: ppr:PBPRB1160 putative paraquat-inducible protein B; hypothetical protein	2218970..2220634	Shewanella sp. MR-4	4252439
YP_733997.1	CDS	Shewmr4_1866	NC_008321.1	2220636	2221229	D	PFAM: protein of unknown function DUF330; KEGG: noc:Noc_2723 protein of unknown function DUF330; hypothetical protein	2220636..2221229	Shewanella sp. MR-4	4252440
YP_733998.1	CDS	Shewmr4_1867	NC_008321.1	2221386	2222774	R	PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: mag:amb4188 di- and tricarboxylate transporters; sodium/sulfate symporter	complement(2221386..2222774)	Shewanella sp. MR-4	4252441
YP_733999.1	CDS	Shewmr4_1868	NC_008321.1	2222854	2223666	D	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: pae:PA3927 probable transcriptional regulator; AraC family transcriptional regulator	2222854..2223666	Shewanella sp. MR-4	4252442
YP_734000.1	CDS	Shewmr4_1869	NC_008321.1	2223859	2226375	R	KEGG: son:SO2459 glucoamylase; TIGRFAM: glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related; glucan 1,4-alpha-glucosidase	complement(2223859..2226375)	Shewanella sp. MR-4	4252443
YP_734001.1	CDS	Shewmr4_1870	NC_008321.1	2226513	2228108	R	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2458 transporter, putative; major facilitator transporter	complement(2226513..2228108)	Shewanella sp. MR-4	4252444
YP_734002.1	CDS	Shewmr4_1871	NC_008321.1	2228853	2229146	D	PFAM: YCII-related; KEGG: son:SO2457 hypothetical protein; YCII-like protein	2228853..2229146	Shewanella sp. MR-4	4252445
YP_734003.1	CDS	Shewmr4_1872	NC_008321.1	2229281	2230159	D	KEGG: pcr:Pcryo_0089 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein	2229281..2230159	Shewanella sp. MR-4	4252446
YP_734004.1	CDS	Shewmr4_1873	NC_008321.1	2230347	2231354	D	KEGG: son:SO2451 hypothetical protein; hypothetical protein	2230347..2231354	Shewanella sp. MR-4	4252447
YP_734005.1	CDS	Shewmr4_1874	NC_008321.1	2231440	2231889	R	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: pfo:Pfl_3201 alkylhydroperoxidase AhpD core; alkylhydroperoxidase	complement(2231440..2231889)	Shewanella sp. MR-4	4252448
YP_734006.1	CDS	Shewmr4_1875	NC_008321.1	2231926	2232810	R	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ilo:IL2485 transcriptional regulator, AraC family; AraC family transcriptional regulator	complement(2231926..2232810)	Shewanella sp. MR-4	4252449
YP_734007.1	CDS	Shewmr4_1876	NC_008321.1	2233126	2235237	R	KEGG: son:SO2450 alpha-glucosidase; alpha-glucosidase	complement(2233126..2235237)	Shewanella sp. MR-4	4252450
YP_734008.1	CDS	Shewmr4_1877	NC_008321.1	2235508	2236350	D	KEGG: son:SO2449 hypothetical protein; hypothetical protein	2235508..2236350	Shewanella sp. MR-4	4252451
YP_734009.1	CDS	Shewmr4_1878	NC_008321.1	2236464	2236994	D	PFAM: NUDIX hydrolase; KEGG: son:SO2448 MutT/nudix family protein; NUDIX hydrolase	2236464..2236994	Shewanella sp. MR-4	4252452
YP_734010.1	CDS	Shewmr4_1879	NC_008321.1	2237086	2237769	R	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: son:SO2447 channel protein, hemolysin III family subfamily; hemolysin III family channel protein	complement(2237086..2237769)	Shewanella sp. MR-4	4252453
YP_734011.1	CDS	Shewmr4_1880	NC_008321.1	2238046	2239164	D	KEGG: son:SO2446 hypothetical protein; hypothetical protein	2238046..2239164	Shewanella sp. MR-4	4252454
YP_734012.1	CDS	Shewmr4_1881	NC_008321.1	2239597	2241759	D	required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC	2239597..2241759	Shewanella sp. MR-4	4252455
YP_734013.1	CDS	Shewmr4_1882	NC_008321.1	2241762	2243459	D	KEGG: son:SO2444 phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; thiamine-phosphate pyrophosphorylase	2241762..2243459	Shewanella sp. MR-4	4252456
YP_734014.1	CDS	Shewmr4_1883	NC_008321.1	2243456	2244475	D	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: son:SO2443 thiF protein, putative; UBA/THIF-type NAD/FAD binding protein	2243456..2244475	Shewanella sp. MR-4	4252457
YP_734015.1	CDS	Shewmr4_1884	NC_008321.1	2244472	2244675	D	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: son:SO2442 thiS protein, putative; thiamine biosynthesis protein ThiS	2244472..2244675	Shewanella sp. MR-4	4252458
YP_734016.1	CDS	thiG	NC_008321.1	2244677	2245441	D	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase	2244677..2245441	Shewanella sp. MR-4	4252459
YP_734017.1	CDS	thiH	NC_008321.1	2245438	2246553	D	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH	2245438..2246553	Shewanella sp. MR-4	4252460
YP_734018.1	CDS	Shewmr4_1887	NC_008321.1	2246678	2246941	D	KEGG: son:SO2439.2 hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein	2246678..2246941	Shewanella sp. MR-4	4252461
YP_734019.1	CDS	Shewmr4_1888	NC_008321.1	2246944	2249097	D	KEGG: son:SO2439 SrpA-related protein; SrpA-like protein	2246944..2249097	Shewanella sp. MR-4	4252462
YP_734020.1	CDS	Shewmr4_1889	NC_008321.1	2249275	2250177	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2438 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(2249275..2250177)	Shewanella sp. MR-4	4252463
YP_734021.1	CDS	Shewmr4_1890	NC_008321.1	2250352	2251551	R	KEGG: sdn:Sden_1895 hypothetical protein; hypothetical protein	complement(2250352..2251551)	Shewanella sp. MR-4	4252464
YP_734022.1	CDS	Shewmr4_1891	NC_008321.1	2251478	2253385	R	KEGG: son:SO2437 hypothetical protein; hypothetical protein	complement(2251478..2253385)	Shewanella sp. MR-4	4252465
YP_734023.1	CDS	Shewmr4_1892	NC_008321.1	2253360	2254304	R	TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: sdn:Sden_1893 alpha-L-glutamate ligase-related protein; alpha-L-glutamate ligase-like protein	complement(2253360..2254304)	Shewanella sp. MR-4	4252466
YP_734024.1	CDS	Shewmr4_1893	NC_008321.1	2254304	2255812	R	KEGG: sdn:Sden_1892 gonadoliberin III-related protein; gonadoliberin III-like protein	complement(2254304..2255812)	Shewanella sp. MR-4	4252467
YP_734025.1	CDS	Shewmr4_1894	NC_008321.1	2255963	2256787	R	PFAM: protein of unknown function DUF785; KEGG: sdn:Sden_1891 protein of unknown function DUF785; hypothetical protein	complement(2255963..2256787)	Shewanella sp. MR-4	4252468
YP_734026.1	CDS	Shewmr4_1895	NC_008321.1	2256871	2257863	R	TIGRFAM: putative methyltransferase; PFAM: methyltransferase, putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO2436 methyltransferase, putative; putative methyltransferase	complement(2256871..2257863)	Shewanella sp. MR-4	4252469
YP_734027.1	CDS	Shewmr4_1896	NC_008321.1	2257860	2258591	R	TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO2435 methyltransferase, putative; putative methyltransferase	complement(2257860..2258591)	Shewanella sp. MR-4	4252470
YP_734028.1	CDS	Shewmr4_1897	NC_008321.1	2258740	2261553	D	KEGG: son:SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3; diguanylate cyclase	2258740..2261553	Shewanella sp. MR-4	4252471
YP_734029.1	CDS	aspS	NC_008321.1	2261738	2263513	D	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase	2261738..2263513	Shewanella sp. MR-4	4252472
YP_734030.1	CDS	Shewmr4_1899	NC_008321.1	2263730	2264476	D	PFAM: protein of unknown function DUF28; KEGG: son:SO2432 conserved hypothetical protein TIGR01033; hypothetical protein	2263730..2264476	Shewanella sp. MR-4	4252473
YP_734031.1	CDS	ruvC	NC_008321.1	2264734	2265255	D	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase	2264734..2265255	Shewanella sp. MR-4	4252474
YP_734032.1	CDS	ruvA	NC_008321.1	2265252	2265869	D	plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA	2265252..2265869	Shewanella sp. MR-4	4252475
YP_734033.1	CDS	ruvB	NC_008321.1	2265990	2266994	D	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB	2265990..2266994	Shewanella sp. MR-4	4252476
YP_734034.1	CDS	Shewmr4_1903	NC_008321.1	2267956	2270523	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2427 TonB-dependent receptor, putative; TonB-dependent receptor	2267956..2270523	Shewanella sp. MR-4	4252477
YP_734035.1	CDS	Shewmr4_1904	NC_008321.1	2270720	2271400	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2426 DNA-binding response regulator; two component transcriptional regulator	2270720..2271400	Shewanella sp. MR-4	4252478
YP_734036.1	CDS	Shewmr4_1905	NC_008321.1	2271581	2272708	D	PFAM: peptidase M14, carboxypeptidase A; KEGG: son:SO2424 zinc carboxypeptidase domain protein; peptidase M14, carboxypeptidase A	2271581..2272708	Shewanella sp. MR-4	4252479
YP_734037.1	CDS	Shewmr4_1906	NC_008321.1	2272717	2273034	D	KEGG: son:SO2423 hypothetical protein; hypothetical protein	2272717..2273034	Shewanella sp. MR-4	4252480
YP_734038.1	CDS	Shewmr4_1907	NC_008321.1	2273031	2273312	D	PFAM: protein of unknown function DUF1315; KEGG: son:SO2422 hypothetical protein; hypothetical protein	2273031..2273312	Shewanella sp. MR-4	4252481
YP_734039.1	CDS	ansA	NC_008321.1	2273383	2274396	R	converts asparagine to aspartate and ammonia; cytoplasmic asparaginase I	complement(2273383..2274396)	Shewanella sp. MR-4	4252482
YP_734040.1	CDS	Shewmr4_1909	NC_008321.1	2274508	2276352	R	TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: son:SO2420 signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 67K type	complement(2274508..2276352)	Shewanella sp. MR-4	4252483
YP_734041.1	CDS	Shewmr4_1910	NC_008321.1	2276518	2278536	D	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2419 2,4-dienoyl-CoA reductase, putative; 2,4-dienoyl-CoA reductase	2276518..2278536	Shewanella sp. MR-4	4252484
YP_734042.1	CDS	Shewmr4_1911	NC_008321.1	2278581	2279384	R	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	complement(2278581..2279384)	Shewanella sp. MR-4	4252485
YP_734043.1	CDS	Shewmr4_1912	NC_008321.1	2279414	2279809	R	KEGG: dde:Dde_2987 transposase; transposase	complement(2279414..2279809)	Shewanella sp. MR-4	4252486
YP_734044.1	CDS	Shewmr4_1913	NC_008321.1	2279939	2280409	R	KEGG: sdn:Sden_2845 hypothetical protein; hypothetical protein	complement(2279939..2280409)	Shewanella sp. MR-4	4252487
YP_734045.1	CDS	Shewmr4_1914	NC_008321.1	2280593	2281003	R	PFAM: ferredoxin; KEGG: son:SO2417 iron-sulfur cluster-binding protein; ferredoxin	complement(2280593..2281003)	Shewanella sp. MR-4	4252488
YP_734046.1	CDS	nrdB	NC_008321.1	2281020	2282150	R	B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta	complement(2281020..2282150)	Shewanella sp. MR-4	4252489
YP_734047.1	CDS	Shewmr4_1916	NC_008321.1	2282212	2284500	R	Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha	complement(2282212..2284500)	Shewanella sp. MR-4	4252490
YP_734048.1	CDS	Shewmr4_1917	NC_008321.1	2284988	2285662	R	KEGG: son:SO2414 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase	complement(2284988..2285662)	Shewanella sp. MR-4	4252491
YP_734049.1	CDS	Shewmr4_1918	NC_008321.1	2285664	2286374	R	Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase	complement(2285664..2286374)	Shewanella sp. MR-4	4252492
YP_734050.1	CDS	Shewmr4_1919	NC_008321.1	2286682	2289522	D	TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: son:SO2411 DNA gyrase subunit A; DNA gyrase subunit A	2286682..2289522	Shewanella sp. MR-4	4252493
YP_734051.1	CDS	Shewmr4_1920	NC_008321.1	2289628	2290719	D	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase	2289628..2290719	Shewanella sp. MR-4	4252494
YP_734052.1	CDS	Shewmr4_1921	NC_008321.1	2290978	2292168	R	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase	complement(2290978..2292168)	Shewanella sp. MR-4	4252495
YP_734053.1	CDS	Shewmr4_1922	NC_008321.1	2292604	2293884	D	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase	2292604..2293884	Shewanella sp. MR-4	4252496
YP_734054.1	CDS	cmk	NC_008321.1	2294067	2294759	D	Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase	2294067..2294759	Shewanella sp. MR-4	4252497
YP_734055.1	CDS	rpsA	NC_008321.1	2294862	2296529	D	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1	2294862..2296529	Shewanella sp. MR-4	4252498
YP_734056.1	CDS	ihfB	NC_008321.1	2296602	2296889	D	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta	2296602..2296889	Shewanella sp. MR-4	4252499
YP_734057.1	CDS	Shewmr4_1926	NC_008321.1	2297013	2297288	D	PFAM: protein of unknown function DUF1049; KEGG: son:SO2400 hypothetical protein; hypothetical protein	2297013..2297288	Shewanella sp. MR-4	4252500
YP_734058.1	CDS	Shewmr4_1927	NC_008321.1	2297290	2298450	D	KEGG: son:SO2399 hypothetical protein; hypothetical protein	2297290..2298450	Shewanella sp. MR-4	4252501
YP_734059.1	CDS	Shewmr4_1928	NC_008321.1	2298493	2299188	D	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase	2298493..2299188	Shewanella sp. MR-4	4252502
YP_734060.1	CDS	Shewmr4_1929	NC_008321.1	2299261	2300058	D	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO2397 short chain dehydrogenase; short chain dehydrogenase	2299261..2300058	Shewanella sp. MR-4	4252503
YP_734061.1	CDS	Shewmr4_1930	NC_008321.1	2300148	2300690	D	KEGG: son:SO2396 hypothetical protein; hypothetical protein	2300148..2300690	Shewanella sp. MR-4	4252504
YP_734062.1	CDS	Shewmr4_1931	NC_008321.1	2300908	2302665	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO2395 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein	2300908..2302665	Shewanella sp. MR-4	4252505
YP_734063.1	CDS	Shewmr4_1932	NC_008321.1	2302774	2304315	R	KEGG: son:SO2394 penicillin-binding protein 4; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	complement(2302774..2304315)	Shewanella sp. MR-4	4252506
YP_734064.1	CDS	Shewmr4_1933	NC_008321.1	2304342	2304518	R	KEGG: son:SO2393 hypothetical protein; hypothetical protein	complement(2304342..2304518)	Shewanella sp. MR-4	4252507
YP_734065.1	CDS	Shewmr4_1934	NC_008321.1	2304899	2305231	D	KEGG: son:SO2391 hypothetical protein; hypothetical protein	2304899..2305231	Shewanella sp. MR-4	4252508
YP_734066.1	CDS	pssA	NC_008321.1	2305243	2306556	D	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase	2305243..2306556	Shewanella sp. MR-4	4252509
YP_734067.1	CDS	emrD	NC_008321.1	2306620	2307864	R	multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D	complement(2306620..2307864)	Shewanella sp. MR-4	4252510
YP_734068.1	CDS	ampC	NC_008321.1	2308205	2309458	R	PFAM: beta-lactamase; KEGG: son:SO2388 beta-lactamase; beta-lactamase	complement(2308205..2309458)	Shewanella sp. MR-4	4252511
YP_734069.1	CDS	Shewmr4_1938	NC_008321.1	2309886	2310650	D	PFAM: DTW domain containing protein; KEGG: son:SO2387 conserved hypothetical protein; DTW domain-containing protein	2309886..2310650	Shewanella sp. MR-4	4252512
YP_734070.1	CDS	Shewmr4_1939	NC_008321.1	2310916	2312172	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bth:BT0304 acriflavine resistance protein A precursor; RND family efflux transporter MFP subunit	2310916..2312172	Shewanella sp. MR-4	4252513
YP_734071.1	CDS	Shewmr4_1940	NC_008321.1	2312172	2315339	D	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bth:BT0305 putative aminoglycoside efflux pump (acriflavine resistance protein); hydrophobe/amphiphile efflux-1 (HAE1) family protein	2312172..2315339	Shewanella sp. MR-4	4252514
YP_734072.1	CDS	Shewmr4_1941	NC_008321.1	2315332	2316825	D	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_02946 type I secretion outer membrane protein; RND efflux system outer membrane lipoprotein	2315332..2316825	Shewanella sp. MR-4	4252515
YP_734073.1	CDS	Shewmr4_1942	NC_008321.1	2316876	2318933	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF839; KEGG: son:SO2385 hypothetical protein; twin-arginine translocation pathway signal	complement(2316876..2318933)	Shewanella sp. MR-4	4252516
YP_734074.1	CDS	Shewmr4_1943	NC_008321.1	2319129	2320238	R	PFAM: phage integrase family protein; KEGG: son:SO2384 site-specific recombinase, phage integrase family; phage integrase family protein	complement(2319129..2320238)	Shewanella sp. MR-4	4252517
YP_734075.1	CDS	Shewmr4_1944	NC_008321.1	2320864	2321364	D	KEGG: son:SO2383 hypothetical protein; hypothetical protein	2320864..2321364	Shewanella sp. MR-4	4252518
YP_734076.1	CDS	Shewmr4_1945	NC_008321.1	2321521	2321847	D	KEGG: son:SO2381 hypothetical protein; hypothetical protein	2321521..2321847	Shewanella sp. MR-4	4252519
YP_734077.1	CDS	Shewmr4_1946	NC_008321.1	2321936	2323912	D	TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO2380 RecQ domain protein; ATP-dependent DNA helicase RecQ	2321936..2323912	Shewanella sp. MR-4	4252520
YP_734078.1	CDS	Shewmr4_1947	NC_008321.1	2323997	2324548	R	serine protease inhibitor, inhibits trypsin and other proteases; ecotin	complement(2323997..2324548)	Shewanella sp. MR-4	4252521
YP_734079.1	CDS	Shewmr4_1948	NC_008321.1	2325279	2326280	D	KEGG: pha:PSHAb0175 conserved protein of unknown function ; putative lipoprotein; hypothetical protein	2325279..2326280	Shewanella sp. MR-4	4252522
YP_734080.1	CDS	Shewmr4_1950	NC_008321.1	2327223	2328068	D	KEGG: eli:ELI_11055 hypothetical protein; hypothetical protein	2327223..2328068	Shewanella sp. MR-4	4252523
YP_734081.1	CDS	Shewmr4_1951	NC_008321.1	2328664	2330043	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO2295 MATE efflux family protein; MATE efflux family protein	complement(2328664..2330043)	Shewanella sp. MR-4	4252524
YP_734082.1	CDS	Shewmr4_1952	NC_008321.1	2330077	2330697	D	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha	2330077..2330697	Shewanella sp. MR-4	4252525
YP_734083.1	CDS	Shewmr4_1953	NC_008321.1	2330707	2330907	R	KEGG: son:SO2297 hypothetical protein; hypothetical protein	complement(2330707..2330907)	Shewanella sp. MR-4	4252526
YP_734084.1	CDS	Shewmr4_1954	NC_008321.1	2331122	2331505	R	KEGG: son:SO2298 hypothetical protein; hypothetical protein	complement(2331122..2331505)	Shewanella sp. MR-4	4252527
YP_734085.1	CDS	Shewmr4_1955	NC_008321.1	2331757	2333685	D	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase	2331757..2333685	Shewanella sp. MR-4	4252528
YP_734086.1	CDS	infC	NC_008321.1	2333800	2334231	D	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3	2333800..2334231	Shewanella sp. MR-4	4252529
YP_734087.1	CDS	rpmI	NC_008321.1	2334316	2334510	D	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: son:SO2301 50S ribosomal protein L35; 50S ribosomal protein L35	2334316..2334510	Shewanella sp. MR-4	4252530
YP_734088.1	CDS	rplT	NC_008321.1	2334527	2334883	D	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20	2334527..2334883	Shewanella sp. MR-4	4252531
YP_734089.1	CDS	Shewmr4_1959	NC_008321.1	2335047	2336000	R	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2303 thioredoxin reductase; thioredoxin reductase	complement(2335047..2336000)	Shewanella sp. MR-4	4252532
YP_734090.1	CDS	Shewmr4_1960	NC_008321.1	2336266	2336469	D	KEGG: son:SO1485 hypothetical protein; hypothetical protein	2336266..2336469	Shewanella sp. MR-4	4252533
YP_734091.1	CDS	Shewmr4_1961	NC_008321.1	2336518	2337633	R	TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: sdn:Sden_1741 alanine dehydrogenase; L-alanine dehydrogenase	complement(2336518..2337633)	Shewanella sp. MR-4	4252534
YP_734092.1	CDS	Shewmr4_1962	NC_008321.1	2337814	2338320	D	mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator	2337814..2338320	Shewanella sp. MR-4	4252535
YP_734093.1	CDS	Shewmr4_1963	NC_008321.1	2338642	2341386	D	PFAM: cell divisionFtsK/SpoIIIE; KEGG: son:SO2306 cell division protein FtsK, putative; DNA translocase FtsK	2338642..2341386	Shewanella sp. MR-4	4252536
YP_734094.1	CDS	Shewmr4_1964	NC_008321.1	2341456	2342076	D	TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: son:SO2307 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA	2341456..2342076	Shewanella sp. MR-4	4252537
YP_734095.1	CDS	Shewmr4_1965	NC_008321.1	2342085	2343416	D	PFAM: magnesium chelatase, ChlI subunit; AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: son:SO2308 ATPase, AAA family; recombination factor protein RarA	2342085..2343416	Shewanella sp. MR-4	4252538
YP_734096.1	CDS	Shewmr4_1966	NC_008321.1	2343409	2343783	D	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB	2343409..2343783	Shewanella sp. MR-4	4252539
YP_734097.1	CDS	Shewmr4_1967	NC_008321.1	2343802	2345088	D	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase	2343802..2345088	Shewanella sp. MR-4	4252540
YP_734098.1	CDS	Shewmr4_1968	NC_008321.1	2345107	2345229	D	KEGG: son:SO2311 hypothetical protein; hypothetical protein	2345107..2345229	Shewanella sp. MR-4	4252541
YP_734099.1	CDS	Shewmr4_1969	NC_008321.1	2345297	2345635	R	PFAM: DsrC family protein; KEGG: son:SO2379 putative sulfite reductase; DsrC family protein	complement(2345297..2345635)	Shewanella sp. MR-4	4252542
YP_734100.1	CDS	Shewmr4_1970	NC_008321.1	2345629	2345910	R	PFAM: DsrH family protein; KEGG: son:SO2378 putative uncharacterized protein involved in oxidation of intracellular sulfur; DsrH family protein	complement(2345629..2345910)	Shewanella sp. MR-4	4252543
YP_734101.1	CDS	Shewmr4_1971	NC_008321.1	2345910	2346266	R	PFAM: DsrE family protein; KEGG: son:SO2377 putative uncharacterized protein involved in oxidation of intracellular sulfur; DsrE family protein	complement(2345910..2346266)	Shewanella sp. MR-4	4252544
YP_734102.1	CDS	Shewmr4_1972	NC_008321.1	2346281	2346673	R	PFAM: DsrE family protein; KEGG: son:SO2376 DsrE-related protein; DsrE family protein	complement(2346281..2346673)	Shewanella sp. MR-4	4252545
YP_734103.1	CDS	Shewmr4_1973	NC_008321.1	2346730	2347389	R	PFAM: protein of unknown function UPF0005; KEGG: son:SO2375 membrane protein, putative; hypothetical protein	complement(2346730..2347389)	Shewanella sp. MR-4	4252546
YP_734104.1	CDS	Shewmr4_1974	NC_008321.1	2347649	2348560	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2374 transcriptional regulator, LysR family; putative DNA-binding transcriptional regulator	complement(2347649..2348560)	Shewanella sp. MR-4	4252547
YP_734105.1	CDS	Shewmr4_1975	NC_008321.1	2348667	2349938	D	uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC	2348667..2349938	Shewanella sp. MR-4	4252548
YP_734106.1	CDS	Shewmr4_1976	NC_008321.1	2350338	2350868	R	KEGG: cps:CPS_0533 hypothetical protein; hypothetical protein	complement(2350338..2350868)	Shewanella sp. MR-4	4252549
YP_734107.1	CDS	Shewmr4_1977	NC_008321.1	2351238	2352911	D	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase	2351238..2352911	Shewanella sp. MR-4	4252550
YP_734108.1	CDS	araD	NC_008321.1	2352913	2353608	D	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase	2352913..2353608	Shewanella sp. MR-4	4252551
YP_734109.1	CDS	Shewmr4_1979	NC_008321.1	2353647	2355149	D	catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase	2353647..2355149	Shewanella sp. MR-4	4252552
YP_734110.1	CDS	Shewmr4_1980	NC_008321.1	2355226	2355834	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sde:Sde_0770 putative phosphatase; HAD family hydrolase	2355226..2355834	Shewanella sp. MR-4	4252553
YP_734111.1	CDS	Shewmr4_1981	NC_008321.1	2356070	2356786	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ilo:IL0306 transcriptional regulator, FadR family; GntR family transcriptional regulator	2356070..2356786	Shewanella sp. MR-4	4252554
YP_734112.1	CDS	Shewmr4_1982	NC_008321.1	2356875	2357822	R	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0789 endo-1,4-beta-xylanase D precursor; glycoside hydrolase family protein	complement(2356875..2357822)	Shewanella sp. MR-4	4252555
YP_734113.1	CDS	Shewmr4_1983	NC_008321.1	2357999	2359732	D	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase	2357999..2359732	Shewanella sp. MR-4	4252556
YP_734114.1	CDS	Shewmr4_1984	NC_008321.1	2359793	2360563	D	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: sde:Sde_0771 transcriptional regulator, GntR family; short-chain dehydrogenase/reductase SDR	2359793..2360563	Shewanella sp. MR-4	4252557
YP_734115.1	CDS	Shewmr4_1985	NC_008321.1	2360643	2361698	D	PFAM: Aldose 1-epimerase; KEGG: gka:GK1877 aldose 1-epimerase; aldose 1-epimerase	2360643..2361698	Shewanella sp. MR-4	4252558
YP_734116.1	CDS	Shewmr4_1986	NC_008321.1	2361797	2362738	D	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sde:Sde_0766 putative LacI-type transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator	2361797..2362738	Shewanella sp. MR-4	4252559
YP_734117.1	CDS	Shewmr4_1987	NC_008321.1	2362770	2364272	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_0767 putative sugar uptake ABC transporter ATP-binding protein; ABC transporter-like protein	2362770..2364272	Shewanella sp. MR-4	4252560
YP_734118.1	CDS	Shewmr4_1988	NC_008321.1	2364269	2365486	D	PFAM: inner-membrane translocator; KEGG: sde:Sde_0768 conserved hypothetical ABC transporter permease protein YtfT; inner-membrane translocator	2364269..2365486	Shewanella sp. MR-4	4252561
YP_734119.1	CDS	Shewmr4_1989	NC_008321.1	2365483	2366445	D	membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease YjfF	2365483..2366445	Shewanella sp. MR-4	4252562
YP_734120.1	CDS	Shewmr4_1990	NC_008321.1	2366420	2367556	D	PFAM: glycoside hydrolase, family 43; KEGG: bha:BH1867 hypothetical protein; Alpha-N-arabinofuranosidase	2366420..2367556	Shewanella sp. MR-4	4252563
YP_734121.1	CDS	Shewmr4_1991	NC_008321.1	2367618	2368619	D	PFAM: glycoside hydrolase, family 43; KEGG: cac:CAC1529 beta-xylosidase, family 43 glycosyl hydrolase; Alpha-N-arabinofuranosidase	2367618..2368619	Shewanella sp. MR-4	4252564
YP_734122.1	CDS	Shewmr4_1992	NC_008321.1	2368903	2369493	D	hypothetical protein	2368903..2369493	Shewanella sp. MR-4	4252565
YP_734123.1	CDS	Shewmr4_1993	NC_008321.1	2369762	2372149	R	PFAM: protein of unknown function DUF1680; KEGG: sde:Sde_0778 acetyl-CoA carboxylase, biotin carboxylase; hypothetical protein	complement(2369762..2372149)	Shewanella sp. MR-4	4252566
YP_734124.1	CDS	Shewmr4_1994	NC_008321.1	2372257	2373702	R	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_0776 MJ0042 finger-like region; sugar (glycoside-Pentoside-hexuronide) transporter	complement(2372257..2373702)	Shewanella sp. MR-4	4252567
YP_734125.1	CDS	Shewmr4_1995	NC_008321.1	2373911	2374978	D	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0786 arabinan endo-1,5-alpha-L-arabinosidase; arabinan endo-1,5-alpha-L-arabinosidase	2373911..2374978	Shewanella sp. MR-4	4252568
YP_734126.1	CDS	Shewmr4_1996	NC_008321.1	2374981	2376885	D	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0791 alpha-L-arabinofuranosidase; glycoside hydrolase family protein	2374981..2376885	Shewanella sp. MR-4	4252569
YP_734127.1	CDS	Shewmr4_1997	NC_008321.1	2377245	2378000	R	PFAM: protein of unknown function DUF81; KEGG: ilo:IL2350 predicted permease; hypothetical protein	complement(2377245..2378000)	Shewanella sp. MR-4	4252570
YP_734128.1	CDS	Shewmr4_1998	NC_008321.1	2378175	2380985	R	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sde:Sde_2288 peptidase M24A, methionine aminopeptidase, subfamily 1; TonB-dependent receptor	complement(2378175..2380985)	Shewanella sp. MR-4	4252571
YP_734129.1	CDS	Shewmr4_1999	NC_008321.1	2381573	2384938	D	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_3317 beta-xylosidase-like; glycoside hydrolase family protein	2381573..2384938	Shewanella sp. MR-4	4252572
YP_734130.1	CDS	Shewmr4_2000	NC_008321.1	2385038	2385889	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: ppr:PBPRB0783 hypothetical protein; hypothetical protein	2385038..2385889	Shewanella sp. MR-4	4252573
YP_734131.1	CDS	Shewmr4_2001	NC_008321.1	2385989	2386897	D	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rso:RSc2755 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein	2385989..2386897	Shewanella sp. MR-4	4252574
YP_734132.1	CDS	Shewmr4_2002	NC_008321.1	2387404	2388699	R	PFAM: phage integrase family protein; KEGG: sdn:Sden_1855 phage integrase; phage integrase family protein	complement(2387404..2388699)	Shewanella sp. MR-4	4252575
YP_734133.1	CDS	Shewmr4_2003	NC_008321.1	2388761	2388979	R	KEGG: sdn:Sden_1854 hypothetical protein; hypothetical protein	complement(2388761..2388979)	Shewanella sp. MR-4	4252576
YP_734134.1	CDS	Shewmr4_2004	NC_008321.1	2389151	2390728	D	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO2366 response regulator; response regulator receiver modulated metal dependent phosphohydrolase	2389151..2390728	Shewanella sp. MR-4	4252577
YP_734135.1	CDS	Shewmr4_2005	NC_008321.1	2390837	2391322	R	KEGG: son:SO2365 hypothetical protein; hypothetical protein	complement(2390837..2391322)	Shewanella sp. MR-4	4252578
YP_734136.1	CDS	Shewmr4_2006	NC_008321.1	2391546	2392982	D	CcoN; FixN; cbb3-type cytochrome c oxidase subunit I	2391546..2392982	Shewanella sp. MR-4	4252579
YP_734137.1	CDS	Shewmr4_2007	NC_008321.1	2392995	2393621	D	CcoO; FixO; cbb3-type cytochrome c oxidase subunit II	2392995..2393621	Shewanella sp. MR-4	4252580
YP_734138.1	CDS	Shewmr4_2008	NC_008321.1	2393633	2393809	D	PFAM: Cbb3-type cytochrome oxidase component; KEGG: son:SO2362 cytochrome c oxidase, cbb3-type, CcoQ subunit; Cbb3-type cytochrome oxidase component	2393633..2393809	Shewanella sp. MR-4	4252581
YP_734139.1	CDS	Shewmr4_2009	NC_008321.1	2393809	2394777	D	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: son:SO2361 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type subunit III	2393809..2394777	Shewanella sp. MR-4	4252582
YP_734140.1	CDS	Shewmr4_2010	NC_008321.1	2394888	2395367	D	KEGG: son:SO2360 hypothetical protein; hypothetical protein	2394888..2395367	Shewanella sp. MR-4	4252583
YP_734141.1	CDS	Shewmr4_2011	NC_008321.1	2395378	2397789	D	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: son:SO2359 cation transport ATPase, E1-E2 family; heavy metal translocating P-type ATPase	2395378..2397789	Shewanella sp. MR-4	4252584
YP_734142.1	CDS	Shewmr4_2012	NC_008321.1	2397810	2398010	D	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: son:SO2358 cytochrome oxidase maturation protein, cbb3-type; cytochrome oxidase maturation protein, cbb3-type	2397810..2398010	Shewanella sp. MR-4	4252585
YP_734143.1	CDS	Shewmr4_2013	NC_008321.1	2398019	2398711	D	KEGG: son:SO2357 hypothetical protein; hypothetical protein	2398019..2398711	Shewanella sp. MR-4	4252586
YP_734144.1	CDS	Shewmr4_2014	NC_008321.1	2398767	2399519	D	Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator	2398767..2399519	Shewanella sp. MR-4	4252587
YP_734145.1	CDS	Shewmr4_2015	NC_008321.1	2399662	2400594	D	with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE	2399662..2400594	Shewanella sp. MR-4	4252588
YP_734146.1	CDS	Shewmr4_2016	NC_008321.1	2400672	2401640	D	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase	2400672..2401640	Shewanella sp. MR-4	4252589
YP_734147.1	CDS	Shewmr4_2017	NC_008321.1	2401699	2402322	R	KEGG: son:SO2353 hypothetical protein; hypothetical protein	complement(2401699..2402322)	Shewanella sp. MR-4	4252590
YP_734148.1	CDS	Shewmr4_2018	NC_008321.1	2402315	2403127	R	KEGG: son:SO2352 bax protein, putative; bax protein	complement(2402315..2403127)	Shewanella sp. MR-4	4252591
YP_734149.1	CDS	Shewmr4_2019	NC_008321.1	2403445	2404368	D	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: son:SO2351 hypothetical protein; hypothetical protein	2403445..2404368	Shewanella sp. MR-4	4252592
YP_734150.1	CDS	Shewmr4_2020	NC_008321.1	2404520	2405713	R	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase	complement(2404520..2405713)	Shewanella sp. MR-4	4252593
YP_734151.1	CDS	Shewmr4_2021	NC_008321.1	2406630	2408063	R	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase	complement(2406630..2408063)	Shewanella sp. MR-4	4252594
YP_734152.1	CDS	Shewmr4_2022	NC_008321.1	2408270	2409160	D	KEGG: son:SO2346 hypothetical protein; hypothetical protein	2408270..2409160	Shewanella sp. MR-4	4252595
YP_734153.1	CDS	Shewmr4_2023	NC_008321.1	2409373	2410383	D	KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase	2409373..2410383	Shewanella sp. MR-4	4252596
YP_734154.1	CDS	Shewmr4_2024	NC_008321.1	2410509	2411021	R	PFAM: superoxide dismutase, copper/zinc binding; KEGG: tbd:Tbd_0659 superoxide dismutase, Cu-Zn; superoxide dismutase, copper/zinc binding	complement(2410509..2411021)	Shewanella sp. MR-4	4252597
YP_734155.1	CDS	Shewmr4_2025	NC_008321.1	2411313	2412386	R	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase	complement(2411313..2412386)	Shewanella sp. MR-4	4252598
YP_734156.1	CDS	Shewmr4_2026	NC_008321.1	2412531	2414126	R	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: son:SO2341 alpha keto acid dehydrogenase complex, E2 component; dihydrolipoamide acetyltransferase	complement(2412531..2414126)	Shewanella sp. MR-4	4252599
YP_734157.1	CDS	Shewmr4_2027	NC_008321.1	2414136	2415113	R	PFAM: Transketolase, central region; Transketolase domain protein; KEGG: son:SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit; transketolase, central region	complement(2414136..2415113)	Shewanella sp. MR-4	4252600
YP_734158.1	CDS	Shewmr4_2028	NC_008321.1	2415117	2416295	R	PFAM: dehydrogenase, E1 component; KEGG: son:SO2339 alpha keto acid dehydrogenase complex, E1 component, alpha subunit; 3-methyl-2-oxobutanoate dehydrogenase	complement(2415117..2416295)	Shewanella sp. MR-4	4252601
YP_734159.1	CDS	Shewmr4_2029	NC_008321.1	2416458	2417492	R	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase	complement(2416458..2417492)	Shewanella sp. MR-4	4252602
YP_734160.1	CDS	Shewmr4_2030	NC_008321.1	2417771	2418250	D	KEGG: son:SO2337 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase	2417771..2418250	Shewanella sp. MR-4	4252603
YP_734161.1	CDS	Shewmr4_2031	NC_008321.1	2418370	2420022	R	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase	complement(2418370..2420022)	Shewanella sp. MR-4	4252604
YP_734162.1	CDS	Shewmr4_2032	NC_008321.1	2420094	2420645	R	negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA	complement(2420094..2420645)	Shewanella sp. MR-4	4252605
YP_734163.1	CDS	Shewmr4_2033	NC_008321.1	2420917	2421717	D	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: son:SO2333 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein	2420917..2421717	Shewanella sp. MR-4	4252606
YP_734164.1	CDS	Shewmr4_2034	NC_008321.1	2421819	2422040	D	KEGG: son:SO2332 hypothetical protein; hypothetical protein	2421819..2422040	Shewanella sp. MR-4	4252607
YP_734165.1	CDS	Shewmr4_2035	NC_008321.1	2422052	2422324	D	PFAM: CopG domain protein DNA-binding domain protein; KEGG: son:SO2331 hypothetical protein; LexA regulated protein	2422052..2422324	Shewanella sp. MR-4	4252608
YP_734166.1	CDS	Shewmr4_2036	NC_008321.1	2422380	2422907	D	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA	2422380..2422907	Shewanella sp. MR-4	4252609
YP_734167.1	CDS	Shewmr4_2037	NC_008321.1	2422969	2424168	D	KEGG: son:SO2329 hypothetical protein; hypothetical protein	2422969..2424168	Shewanella sp. MR-4	4252610
YP_734168.1	CDS	Shewmr4_2038	NC_008321.1	2424213	2424773	D	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P	2424213..2424773	Shewanella sp. MR-4	4252611
YP_734169.1	CDS	Shewmr4_2039	NC_008321.1	2425100	2426482	R	PFAM: Na+/H+ antiporter NhaC; KEGG: son:SO2481 hypothetical protein; Na+/H+ antiporter NhaC	complement(2425100..2426482)	Shewanella sp. MR-4	4252612
YP_734170.1	CDS	Shewmr4_2040	NC_008321.1	2427223	2428437	D	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT	2427223..2428437	Shewanella sp. MR-4	4252613
YP_734171.1	CDS	Shewmr4_2041	NC_008321.1	2428692	2429279	D	PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: son:SO2484 hypothetical protein; hypothetical protein	2428692..2429279	Shewanella sp. MR-4	4252614
YP_734172.1	CDS	Shewmr4_2042	NC_008321.1	2429305	2430645	D	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein	2429305..2430645	Shewanella sp. MR-4	4252615
YP_734173.1	CDS	Shewmr4_2043	NC_008321.1	2430716	2431357	R	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	complement(2430716..2431357)	Shewanella sp. MR-4	4252616
YP_734174.1	CDS	Shewmr4_2044	NC_008321.1	2431378	2433204	R	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase	complement(2431378..2433204)	Shewanella sp. MR-4	4252617
YP_734175.1	CDS	Shewmr4_2045	NC_008321.1	2433217	2433915	R	TIGRFAM: 6-phosphogluconolactonase; KEGG: son:SO2488 6-phosphogluconolactonase; 6-phosphogluconolactonase	complement(2433217..2433915)	Shewanella sp. MR-4	4252618
YP_734176.1	CDS	Shewmr4_2046	NC_008321.1	2433925	2435397	R	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase	complement(2433925..2435397)	Shewanella sp. MR-4	4252619
YP_734177.1	CDS	Shewmr4_2047	NC_008321.1	2435710	2436564	D	Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR	2435710..2436564	Shewanella sp. MR-4	4252620
YP_734178.1	CDS	Shewmr4_2048	NC_008321.1	2436749	2438188	D	KEGG: son:SO2491 pyruvate kinase II; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase; pyruvate kinase	2436749..2438188	Shewanella sp. MR-4	4252621
YP_734179.1	CDS	Shewmr4_2049	NC_008321.1	2438328	2440607	R	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase	complement(2438328..2440607)	Shewanella sp. MR-4	4252622
YP_734180.1	CDS	Shewmr4_2050	NC_008321.1	2440623	2441261	R	PFAM: regulatory protein, TetR; KEGG: son:SO2493 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(2440623..2441261)	Shewanella sp. MR-4	4252623
YP_734181.1	CDS	Shewmr4_2051	NC_008321.1	2441480	2443342	D	PFAM: peptidase M2, peptidyl-dipeptidase A; KEGG: son:SO2494 zinc-dependent metallopeptidase; peptidyl-dipeptidase A	2441480..2443342	Shewanella sp. MR-4	4252624
YP_734182.1	CDS	Shewmr4_2052	NC_008321.1	2443513	2444103	R	PFAM: Smr protein/MutS2; KEGG: son:SO2495 Smr domain protein; Smr protein/MutS2	complement(2443513..2444103)	Shewanella sp. MR-4	4252625
YP_734183.1	CDS	Shewmr4_2053	NC_008321.1	2444236	2444814	D	KEGG: son:SO2495.1 hypothetical protein; hypothetical protein	2444236..2444814	Shewanella sp. MR-4	4252626
YP_734184.1	CDS	Shewmr4_2054	NC_008321.1	2444842	2445336	D	PFAM: SEC-C motif domain protein; KEGG: son:SO2497 conserved hypothetical protein; SecC motif-containing protein	2444842..2445336	Shewanella sp. MR-4	4252627
YP_734185.1	CDS	Shewmr4_2055	NC_008321.1	2445416	2447599	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: son:SO2498 sensory box protein; diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)	complement(2445416..2447599)	Shewanella sp. MR-4	4252628
YP_734186.1	CDS	Shewmr4_2056	NC_008321.1	2447791	2448078	R	KEGG: son:SO2499 hypothetical protein; hypothetical protein	complement(2447791..2448078)	Shewanella sp. MR-4	4252629
YP_734187.1	CDS	Shewmr4_2057	NC_008321.1	2448317	2448805	R	KEGG: son:SO2500 hypothetical protein; hypothetical protein	complement(2448317..2448805)	Shewanella sp. MR-4	4252630
YP_734188.1	CDS	Shewmr4_2058	NC_008321.1	2449521	2450189	R	KEGG: son:SO2501 radical activating enzyme; radical activating enzyme	complement(2449521..2450189)	Shewanella sp. MR-4	4252631
YP_734189.1	CDS	Shewmr4_2059	NC_008321.1	2450378	2451097	D	YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC	2450378..2451097	Shewanella sp. MR-4	4252632
YP_734190.1	CDS	Shewmr4_2060	NC_008321.1	2451094	2451708	D	PFAM: Rhomboid family protein; KEGG: son:SO2504 hypothetical protein; rhomboid family protein	2451094..2451708	Shewanella sp. MR-4	4252633
YP_734191.1	CDS	Shewmr4_2061	NC_008321.1	2451855	2453876	R	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B	complement(2451855..2453876)	Shewanella sp. MR-4	4252634
YP_734192.1	CDS	Shewmr4_2062	NC_008321.1	2454588	2454791	R	hypothetical protein	complement(2454588..2454791)	Shewanella sp. MR-4	4252635
YP_734193.1	CDS	Shewmr4_2063	NC_008321.1	2456132	2458036	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO2507 GGDEF domain protein; diguanylate cyclase/phosphodiesterase	2456132..2458036	Shewanella sp. MR-4	4252636
YP_734194.1	CDS	Shewmr4_2064	NC_008321.1	2458162	2458740	D	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: son:SO2508 RnfAE/NqrDE family protein; Na(+)-translocating NADH-quinone reductase subunit E	2458162..2458740	Shewanella sp. MR-4	4252637
YP_734195.1	CDS	Shewmr4_2065	NC_008321.1	2458741	2459322	D	part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB	2458741..2459322	Shewanella sp. MR-4	4252638
YP_734196.1	CDS	Shewmr4_2066	NC_008321.1	2459326	2461755	D	part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC	2459326..2461755	Shewanella sp. MR-4	4252639
YP_734197.1	CDS	rnfD	NC_008321.1	2461836	2462885	D	RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD	2461836..2462885	Shewanella sp. MR-4	4252640
YP_734198.1	CDS	Shewmr4_2068	NC_008321.1	2462951	2463577	D	part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG	2462951..2463577	Shewanella sp. MR-4	4252641
YP_734199.1	CDS	Shewmr4_2069	NC_008321.1	2463570	2464268	D	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit	2463570..2464268	Shewanella sp. MR-4	4252642
YP_734200.1	CDS	Shewmr4_2070	NC_008321.1	2464335	2464976	D	KEGG: son:SO2514 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; DNA-(apurinic or apyrimidinic site) lyase / endonuclease III	2464335..2464976	Shewanella sp. MR-4	4252643
YP_734201.1	CDS	Shewmr4_2071	NC_008321.1	2465138	2465404	R	KEGG: son:SO2515 hypothetical protein; hypothetical protein	complement(2465138..2465404)	Shewanella sp. MR-4	4252644
YP_734202.1	CDS	Shewmr4_2072	NC_008321.1	2465553	2466470	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vpa:VPA0602 putative transcription activator NahR; LysR family transcriptional regulator	complement(2465553..2466470)	Shewanella sp. MR-4	4252645
YP_734203.1	CDS	Shewmr4_2073	NC_008321.1	2466667	2467899	D	PFAM: Radical SAM domain protein; KEGG: vpa:VPA0601 putative arylsulfatase regulator; radical SAM domain-containing protein	2466667..2467899	Shewanella sp. MR-4	4252646
YP_734204.1	CDS	Shewmr4_2074	NC_008321.1	2467905	2470274	D	PFAM: sulfatase; KEGG: vpa:VPA0600 putative arylsulfatase AtsD; sulfatase	2467905..2470274	Shewanella sp. MR-4	4252647
YP_734205.1	CDS	Shewmr4_2075	NC_008321.1	2470493	2470957	R	KEGG: ilo:IL2513 hypothetical protein; hypothetical protein	complement(2470493..2470957)	Shewanella sp. MR-4	4252648
YP_734206.1	CDS	Shewmr4_2076	NC_008321.1	2470957	2472126	R	PFAM: PepSY-associated TM helix domain protein; KEGG: ilo:IL2512 uncharacterized iron-regulated membrane protein; PepSY-associated TM helix domain-containing protein	complement(2470957..2472126)	Shewanella sp. MR-4	4252649
YP_734207.1	CDS	Shewmr4_2077	NC_008321.1	2472356	2473177	D	PFAM: beta-lactamase domain protein; KEGG: eli:ELI_06065 Zn-dependent hydrolase, glyoxylase family protein; beta-lactamase domain-containing protein	2472356..2473177	Shewanella sp. MR-4	4252650
YP_734208.1	CDS	Shewmr4_2078	NC_008321.1	2473432	2474388	D	KEGG: son:SO2517 hypothetical protein; hypothetical protein	2473432..2474388	Shewanella sp. MR-4	4252651
YP_734209.1	CDS	Shewmr4_2079	NC_008321.1	2474399	2475277	R	KEGG: son:SO2518 hypothetical protein; hypothetical protein	complement(2474399..2475277)	Shewanella sp. MR-4	4252652
YP_734210.1	CDS	Shewmr4_2080	NC_008321.1	2475513	2476736	R	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO2519 transcriptional regulator, AraC family; AraC family transcriptional regulator	complement(2475513..2476736)	Shewanella sp. MR-4	4252653
YP_734211.1	CDS	Shewmr4_2081	NC_008321.1	2476736	2477701	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2520 GGDEF domain protein; diguanylate cyclase	complement(2476736..2477701)	Shewanella sp. MR-4	4252654
YP_734212.1	CDS	Shewmr4_2082	NC_008321.1	2478353	2481181	D	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2523 hypothetical TonB-dependent receptor; TonB-dependent receptor	2478353..2481181	Shewanella sp. MR-4	4252655
YP_734213.1	CDS	Shewmr4_2083	NC_008321.1	2481206	2483143	D	PFAM: phytase; KEGG: son:SO2524 phytase, putative; 3-phytase	2481206..2483143	Shewanella sp. MR-4	4252656
YP_734214.1	CDS	Shewmr4_2084	NC_008321.1	2483373	2484965	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2525 ABC transporter, ATP-binding protein; ABC transporter-like protein	2483373..2484965	Shewanella sp. MR-4	4252657
YP_734215.1	CDS	Shewmr4_2085	NC_008321.1	2485135	2485584	R	PFAM: Activator of Hsp90 ATPase family protein; KEGG: dar:Daro_4073 hypothetical protein; activator of Hsp90 ATPase family protein	complement(2485135..2485584)	Shewanella sp. MR-4	4252658
YP_734216.1	CDS	Shewmr4_2086	NC_008321.1	2485696	2486850	R	KEGG: hch:HCH_01547 hypothetical protein; hypothetical protein	complement(2485696..2486850)	Shewanella sp. MR-4	4252659
YP_734217.1	CDS	Shewmr4_2087	NC_008321.1	2487203	2488837	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; KEGG: son:SO2127 response regulator; response regulator receiver modulated diguanylate cyclase	2487203..2488837	Shewanella sp. MR-4	4252660
YP_734218.1	CDS	Shewmr4_2088	NC_008321.1	2489070	2490125	R	PFAM: CheB methylesterase; response regulator receiver; KEGG: son:SO2126 protein-glutamate methylesterase CheB; response regulator receiver modulated CheB methylesterase	complement(2489070..2490125)	Shewanella sp. MR-4	4252661
YP_734219.1	CDS	Shewmr4_2089	NC_008321.1	2490129	2490749	R	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors; chemoreceptor glutamine deamidase CheD	complement(2490129..2490749)	Shewanella sp. MR-4	4252662
YP_734220.1	CDS	Shewmr4_2090	NC_008321.1	2490750	2491580	R	PFAM: MCP methyltransferase, CheR-type; KEGG: son:SO2124 chemotaxis protein methyltransferase CheR; MCP methyltransferase, CheR-type	complement(2490750..2491580)	Shewanella sp. MR-4	4252663
YP_734221.1	CDS	Shewmr4_2091	NC_008321.1	2491581	2493551	R	PFAM: chemotaxis sensory transducer; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: son:SO2123 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(2491581..2493551)	Shewanella sp. MR-4	4252664
YP_734222.1	CDS	Shewmr4_2092	NC_008321.1	2493557	2494069	R	PFAM: CheW domain protein; KEGG: son:SO2122 purine-binding chemotaxis protein CheW; CheW protein	complement(2493557..2494069)	Shewanella sp. MR-4	4252665
YP_734223.1	CDS	Shewmr4_2093	NC_008321.1	2494084	2496294	R	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: son:SO2121 chemotaxis protein CheA; CheA signal transduction histidine kinases	complement(2494084..2496294)	Shewanella sp. MR-4	4252666
YP_734224.1	CDS	Shewmr4_2094	NC_008321.1	2496313	2496678	R	PFAM: response regulator receiver; KEGG: son:SO2120 chemotaxis protein CheY; response regulator receiver protein	complement(2496313..2496678)	Shewanella sp. MR-4	4252667
YP_734225.1	CDS	Shewmr4_2095	NC_008321.1	2496679	2498382	R	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: son:SO2119 response regulator; response regulator receiver protein	complement(2496679..2498382)	Shewanella sp. MR-4	4252668
YP_734226.1	CDS	Shewmr4_2096	NC_008321.1	2498383	2498676	R	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: son:SO2118 SpoIIAA family protein; anti-sigma-factor antagonist	complement(2498383..2498676)	Shewanella sp. MR-4	4252669
YP_734227.1	CDS	Shewmr4_2097	NC_008321.1	2498692	2499828	R	PFAM: chemotaxis sensory transducer; KEGG: son:SO2117 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(2498692..2499828)	Shewanella sp. MR-4	4252670
YP_734228.1	CDS	Shewmr4_2098	NC_008321.1	2500055	2502796	D	PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: son:SO2116 acetyltransferase, GNAT family; CoA-binding domain-containing protein	2500055..2502796	Shewanella sp. MR-4	4252671
YP_734229.1	CDS	Shewmr4_2099	NC_008321.1	2502920	2504503	R	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr8233 efflux pump protein FarB; EmrB/QacA family drug resistance transporter	complement(2502920..2504503)	Shewanella sp. MR-4	4252672
YP_734230.1	CDS	Shewmr4_2100	NC_008321.1	2504500	2505555	R	PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03357 probable protein secretion protein, HlyD family; secretion protein HlyD family protein	complement(2504500..2505555)	Shewanella sp. MR-4	4252673
YP_734231.1	CDS	Shewmr4_2101	NC_008321.1	2505611	2506039	R	PFAM: regulatory protein, MarR; KEGG: ret:RHE_CH03358 probable transcriptional regulator protein, MarR family; MarR family transcriptional regulator	complement(2505611..2506039)	Shewanella sp. MR-4	4252674
YP_734232.1	CDS	Shewmr4_2102	NC_008321.1	2506435	2507361	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2049 GGDEF family protein; diguanylate cyclase	complement(2506435..2507361)	Shewanella sp. MR-4	4252675
YP_734233.1	CDS	Shewmr4_2103	NC_008321.1	2507517	2509142	R	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: son:SO2048 membrane protein, putative; sulfatase	complement(2507517..2509142)	Shewanella sp. MR-4	4252676
YP_734234.1	CDS	Shewmr4_2104	NC_008321.1	2509396	2511489	R	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO2047 prolyl oligopeptidase family protein; prolyl oligopeptidase	complement(2509396..2511489)	Shewanella sp. MR-4	4252677
YP_734235.1	CDS	Shewmr4_2105	NC_008321.1	2512038	2512499	R	PFAM: regulatory protein, MarR; KEGG: son:SO2046 transcriptional regulator, MarR family; MarR family transcriptional regulator	complement(2512038..2512499)	Shewanella sp. MR-4	4252678
YP_734236.1	CDS	Shewmr4_2106	NC_008321.1	2512499	2513713	R	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: son:SO2045 cation efflux family protein; cation diffusion facilitator family transporter	complement(2512499..2513713)	Shewanella sp. MR-4	4252679
YP_734237.1	CDS	Shewmr4_2107	NC_008321.1	2514443	2514853	D	KEGG: son:SO2044 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase	2514443..2514853	Shewanella sp. MR-4	4252680
YP_734238.1	CDS	Shewmr4_2108	NC_008321.1	2514946	2515593	R	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ	complement(2514946..2515593)	Shewanella sp. MR-4	4252681
YP_734239.1	CDS	Shewmr4_2109	NC_008321.1	2515700	2516734	R	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY	complement(2515700..2516734)	Shewanella sp. MR-4	4252682
YP_734240.1	CDS	Shewmr4_2110	NC_008321.1	2517009	2518574	D	PFAM: protein of unknown function DUF195; KEGG: son:SO2041 hypothetical protein; hypothetical protein	2517009..2518574	Shewanella sp. MR-4	4252683
YP_734241.1	CDS	Shewmr4_2111	NC_008321.1	2518668	2520593	D	PFAM: Lytic transglycosylase, catalytic; KEGG: son:SO2040 soluble lytic murein transglycosylase, putative; lytic transglycosylase, catalytic	2518668..2520593	Shewanella sp. MR-4	4252684
YP_734242.1	CDS	Shewmr4_2112	NC_008321.1	2520808	2521509	D	PFAM: EAL domain protein; KEGG: son:SO2039 hypothetical protein; diguanylate phosphodiesterase	2520808..2521509	Shewanella sp. MR-4	4252685
YP_734243.1	CDS	Shewmr4_2113	NC_008321.1	2521822	2522475	R	KEGG: sdn:Sden_3355 hypothetical protein; hypothetical protein	complement(2521822..2522475)	Shewanella sp. MR-4	4252686
YP_734244.1	CDS	Shewmr4_2114	NC_008321.1	2523170	2524093	R	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase; IS4 family transposase	complement(2523170..2524093)	Shewanella sp. MR-4	4252687
YP_734245.1	CDS	Shewmr4_2115	NC_008321.1	2524342	2525178	R	KEGG: csa:Csal_0736 hypothetical protein; hypothetical protein	complement(2524342..2525178)	Shewanella sp. MR-4	4252688
YP_734246.1	CDS	Shewmr4_2116	NC_008321.1	2525483	2525878	D	KEGG: dde:Dde_2987 transposase; transposase	2525483..2525878	Shewanella sp. MR-4	4252689
YP_734247.1	CDS	Shewmr4_2117	NC_008321.1	2525908	2526711	D	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	2525908..2526711	Shewanella sp. MR-4	4252690
YP_734248.1	CDS	Shewmr4_2118	NC_008321.1	2526860	2528332	R	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: plt:Plut_1820 RNA-directed DNA polymerase; RNA-directed DNA polymerase	complement(2526860..2528332)	Shewanella sp. MR-4	4252691
YP_734249.1	CDS	Shewmr4_2119	NC_008321.1	2529734	2530216	D	KEGG: ava:Ava_4004 hypothetical protein; hypothetical protein	2529734..2530216	Shewanella sp. MR-4	4252692
YP_734250.1	CDS	Shewmr4_2120	NC_008321.1	2530695	2531714	D	PFAM: UMUC domain protein DNA-repair protein; KEGG: sdn:Sden_3235 DNA-directed DNA polymerase; DNA-repair protein	2530695..2531714	Shewanella sp. MR-4	4252693
YP_734251.1	CDS	Shewmr4_2121	NC_008321.1	2531982	2532917	R	KEGG: son:SO2225 hypothetical protein; hypothetical protein	complement(2531982..2532917)	Shewanella sp. MR-4	4252694
YP_734252.1	CDS	Shewmr4_2122	NC_008321.1	2532973	2533431	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2224 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(2532973..2533431)	Shewanella sp. MR-4	4252695
YP_734253.1	CDS	Shewmr4_2123	NC_008321.1	2533569	2535632	R	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: son:SO2223 peptidase, putative; peptidase S9 prolyl oligopeptidase	complement(2533569..2535632)	Shewanella sp. MR-4	4252696
YP_734254.1	CDS	Shewmr4_2124	NC_008321.1	2535895	2537439	R	TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: son:SO2222 fumarate hydratase, class I, anaerobic, putative; fumarase	complement(2535895..2537439)	Shewanella sp. MR-4	4252697
YP_734255.1	CDS	Shewmr4_2125	NC_008321.1	2537561	2538964	D	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: son:SO2221 para-aminobenzoate synthase, component I; aminodeoxychorismate synthase subunit I	2537561..2538964	Shewanella sp. MR-4	4252698
YP_734256.1	CDS	Shewmr4_2126	NC_008321.1	2538990	2539577	D	PFAM: NUDIX hydrolase; KEGG: son:SO2220 MutT/nudix family protein; NUDIX hydrolase	2538990..2539577	Shewanella sp. MR-4	4252699
YP_734257.1	CDS	Shewmr4_2127	NC_008321.1	2539602	2539937	R	KEGG: son:SO2219 hypothetical protein; hypothetical protein	complement(2539602..2539937)	Shewanella sp. MR-4	4252700
YP_734258.1	CDS	asnC	NC_008321.1	2540089	2541489	D	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase	2540089..2541489	Shewanella sp. MR-4	4252701
YP_734259.1	CDS	ddl	NC_008321.1	2541753	2542763	D	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A	2541753..2542763	Shewanella sp. MR-4	4252702
YP_734260.1	CDS	Shewmr4_2130	NC_008321.1	2542816	2545074	R	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: son:SO2216 sensory box protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	complement(2542816..2545074)	Shewanella sp. MR-4	4252703
YP_734261.1	CDS	Shewmr4_2131	NC_008321.1	2545225	2546439	R	PFAM: Fmu (Sun) domain protein; KEGG: son:SO2215 sun protein, putative; Fmu (Sun) domain-containing protein	complement(2545225..2546439)	Shewanella sp. MR-4	4252704
YP_734262.1	CDS	Shewmr4_2132	NC_008321.1	2546592	2547863	R	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_2027 glucose/galactose transporter; glucose/galactose transporter	complement(2546592..2547863)	Shewanella sp. MR-4	4252705
YP_734263.1	CDS	Shewmr4_2133	NC_008321.1	2547989	2549611	R	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: son:SO2213 alpha-glucosidase; alpha amylase catalytic subunit	complement(2547989..2549611)	Shewanella sp. MR-4	4252706
YP_734264.1	CDS	Shewmr4_2134	NC_008321.1	2550110	2552929	D	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2162 TonB dependent receptor-related protein; TonB-dependent receptor	2550110..2552929	Shewanella sp. MR-4	4252707
YP_734265.1	CDS	Shewmr4_2135	NC_008321.1	2553059	2555056	D	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: sdn:Sden_2031 alpha amylase, catalytic region; alpha amylase catalytic subunit	2553059..2555056	Shewanella sp. MR-4	4252708
YP_734266.1	CDS	Shewmr4_2136	NC_008321.1	2555134	2557248	D	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: son:SO2156 alpha amylase family protein; alpha amylase catalytic subunit	2555134..2557248	Shewanella sp. MR-4	4252709
YP_734267.1	CDS	Shewmr4_2137	NC_008321.1	2557367	2557750	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO2155 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	2557367..2557750	Shewanella sp. MR-4	4252710
YP_734268.1	CDS	Shewmr4_2138	NC_008321.1	2557960	2558169	D	KEGG: cps:CPS_2680 hypothetical protein; hypothetical protein	2557960..2558169	Shewanella sp. MR-4	4252711
YP_734269.1	CDS	Shewmr4_2139	NC_008321.1	2558779	2560632	R	KEGG: mth:MTH551 DNA helicase II related protein; hypothetical protein	complement(2558779..2560632)	Shewanella sp. MR-4	4252712
YP_734270.1	CDS	Shewmr4_2140	NC_008321.1	2560749	2561627	R	KEGG: lpn:lpg0982 hypothetical protein; hypothetical protein	complement(2560749..2561627)	Shewanella sp. MR-4	4252713
YP_734271.1	CDS	Shewmr4_2141	NC_008321.1	2562418	2563266	R	KEGG: son:SO2529 hypothetical protein; hypothetical protein	complement(2562418..2563266)	Shewanella sp. MR-4	4252714
YP_734272.1	CDS	def	NC_008321.1	2563476	2563967	R	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase	complement(2563476..2563967)	Shewanella sp. MR-4	4252715
YP_734273.1	CDS	Shewmr4_2143	NC_008321.1	2564160	2564618	D	PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: son:SO2532 methylated-DNA--protein-cysteine methyltransferase, putative; methylated-DNA-(protein)-cysteine S-methyltransferase	2564160..2564618	Shewanella sp. MR-4	4252716
YP_734274.1	CDS	Shewmr4_2144	NC_008321.1	2564748	2565560	D	KEGG: son:SO2533 hypothetical protein; hypothetical protein	2564748..2565560	Shewanella sp. MR-4	4252717
YP_734275.1	CDS	Shewmr4_2145	NC_008321.1	2565726	2566505	R	PFAM: glutamine amidotransferase, class-II; KEGG: son:SO2535 hypothetical amidotransferase; glutamine amidotransferase, class-II	complement(2565726..2566505)	Shewanella sp. MR-4	4252718
YP_734276.1	CDS	fadE	NC_008321.1	2566749	2569196	D	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase	2566749..2569196	Shewanella sp. MR-4	4252719
YP_734277.1	CDS	Shewmr4_2147	NC_008321.1	2569315	2571327	R	PFAM: sodium/hydrogen exchanger; KEGG: son:SO2537 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger	complement(2569315..2571327)	Shewanella sp. MR-4	4252720
YP_734278.1	CDS	Shewmr4_2148	NC_008321.1	2572130	2572837	R	TetR family transcriptional regulator	complement(2572130..2572837)	Shewanella sp. MR-4	4252721
YP_734279.1	CDS	Shewmr4_2149	NC_008321.1	2572908	2573792	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ret:RHE_CH02498 probable transcriptional regulator protein, LysR family; LysR family transcriptional regulator	2572908..2573792	Shewanella sp. MR-4	4252722
YP_734280.1	CDS	Shewmr4_2150	NC_008321.1	2573879	2575006	R	KEGG: son:SO1412 hypothetical protein; hypothetical protein	complement(2573879..2575006)	Shewanella sp. MR-4	4252723
YP_734281.1	CDS	Shewmr4_2151	NC_008321.1	2575091	2576335	R	hypothetical protein	complement(2575091..2576335)	Shewanella sp. MR-4	4252724
YP_734282.1	CDS	Shewmr4_2152	NC_008321.1	2576719	2577072	R	KEGG: son:SO3623 tetraheme cytochrome c; tetraheme cytochrome c	complement(2576719..2577072)	Shewanella sp. MR-4	4252725
YP_734283.1	CDS	Shewmr4_2153	NC_008321.1	2577100	2578620	R	TIGRFAM: Twin-arginine translocation pathway signal; flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: son:SO3624 flavocytochrome c flavin subunit; flavocytochrome c	complement(2577100..2578620)	Shewanella sp. MR-4	4252726
YP_734284.1	CDS	Shewmr4_2154	NC_008321.1	2578929	2579909	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: vpa:VP0028 zinc-binding alcohol dehydrogenase; alcohol dehydrogenase	complement(2578929..2579909)	Shewanella sp. MR-4	4252727
YP_734285.1	CDS	Shewmr4_2155	NC_008321.1	2580979	2583072	D	KEGG: dar:Daro_0675 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	2580979..2583072	Shewanella sp. MR-4	4252728
YP_734286.1	CDS	Shewmr4_2156	NC_008321.1	2584112	2585536	R	KEGG: son:SO2557 hypothetical protein; hypothetical protein	complement(2584112..2585536)	Shewanella sp. MR-4	4252729
YP_734287.1	CDS	Shewmr4_2157	NC_008321.1	2585670	2586398	R	KEGG: son:SO2559 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon	complement(2585670..2586398)	Shewanella sp. MR-4	4252730
YP_734288.1	CDS	rnhA	NC_008321.1	2586469	2586945	D	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H	2586469..2586945	Shewanella sp. MR-4	4252731
YP_734289.1	CDS	Shewmr4_2159	NC_008321.1	2586967	2587881	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2561 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(2586967..2587881)	Shewanella sp. MR-4	4252732
YP_734290.1	CDS	Shewmr4_2160	NC_008321.1	2587906	2588640	R	PFAM: Methyltransferase type 11; KEGG: son:SO2562 hypothetical protein; type 11 methyltransferase	complement(2587906..2588640)	Shewanella sp. MR-4	4252733
YP_734291.1	CDS	Shewmr4_2161	NC_008321.1	2588725	2589612	D	PFAM: beta-lactamase domain protein; KEGG: son:SO2563 metallo-beta-lactamase family protein; hydroxyacylglutathione hydrolase	2588725..2589612	Shewanella sp. MR-4	4252734
YP_734292.1	CDS	Shewmr4_2162	NC_008321.1	2589864	2591411	D	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: son:SO2564 transglycosylase, Slt family; MltD domain-containing protein	2589864..2591411	Shewanella sp. MR-4	4252735
YP_734293.1	CDS	Shewmr4_2163	NC_008321.1	2591640	2592299	R	KEGG: son:SO2565 intracellular proteinase inhibitor domain protein; intracellular proteinase inhibitor domain-containing protein	complement(2591640..2592299)	Shewanella sp. MR-4	4252736
YP_734294.1	CDS	Shewmr4_2164	NC_008321.1	2592302	2594122	R	PFAM: AsmA family protein; KEGG: son:SO2566 AsmA protein; AsmA family protein	complement(2592302..2594122)	Shewanella sp. MR-4	4252737
YP_734295.1	CDS	Shewmr4_2165	NC_008321.1	2594165	2594659	R	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA	complement(2594165..2594659)	Shewanella sp. MR-4	4252738
YP_734296.1	CDS	Shewmr4_2166	NC_008321.1	2594880	2595200	D	KEGG: son:SO2569 hypothetical protein; hypothetical protein	2594880..2595200	Shewanella sp. MR-4	4252739
YP_734297.1	CDS	Shewmr4_2167	NC_008321.1	2595389	2597179	R	PFAM: protein of unknown function DUF885; KEGG: son:SO2570 lipoprotein, putative; hypothetical protein	complement(2595389..2597179)	Shewanella sp. MR-4	4252740
YP_734298.1	CDS	Shewmr4_2168	NC_008321.1	2597492	2598955	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO2571 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	2597492..2598955	Shewanella sp. MR-4	4252741
YP_734299.1	CDS	Shewmr4_2169	NC_008321.1	2599001	2599501	D	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO2572 peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl cis-trans isomerase, cyclophilin type	2599001..2599501	Shewanella sp. MR-4	4252742
YP_734300.1	CDS	Shewmr4_2170	NC_008321.1	2599746	2600204	R	PFAM: protein of unknown function UPF0153; KEGG: son:SO2573 hypothetical protein; hypothetical protein	complement(2599746..2600204)	Shewanella sp. MR-4	4252743
YP_734301.1	CDS	Shewmr4_2171	NC_008321.1	2600243	2601244	R	KEGG: cps:CPS_3516 putative transglycosylase; putative transglycosylase	complement(2600243..2601244)	Shewanella sp. MR-4	4252744
YP_734302.1	CDS	Shewmr4_2172	NC_008321.1	2601269	2601547	R	PFAM: protein of unknown function DUF709; KEGG: son:SO2575 hypothetical protein; hypothetical protein	complement(2601269..2601547)	Shewanella sp. MR-4	4252745
YP_734303.1	CDS	minC	NC_008321.1	2601671	2602336	D	blocks the formation of polar Z-ring septums; septum formation inhibitor	2601671..2602336	Shewanella sp. MR-4	4252746
YP_734304.1	CDS	Shewmr4_2174	NC_008321.1	2602364	2603173	D	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO2577 septum site-determining protein MinD; septum site-determining protein MinD	2602364..2603173	Shewanella sp. MR-4	4252747
YP_734305.1	CDS	minE	NC_008321.1	2603176	2603433	D	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE	2603176..2603433	Shewanella sp. MR-4	4252748
YP_734306.1	CDS	Shewmr4_2176	NC_008321.1	2603622	2604776	R	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: son:SO2580 ribonuclease D; ribonuclease D	complement(2603622..2604776)	Shewanella sp. MR-4	4252749
YP_734307.1	CDS	Shewmr4_2177	NC_008321.1	2604802	2606475	R	Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase	complement(2604802..2606475)	Shewanella sp. MR-4	4252750
YP_734308.1	CDS	Shewmr4_2178	NC_008321.1	2606675	2607541	R	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: son:SO2582 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein	complement(2606675..2607541)	Shewanella sp. MR-4	4252751
YP_734309.1	CDS	Shewmr4_2179	NC_008321.1	2607563	2608375	R	KEGG: son:SO2583 hypothetical protein; hypothetical protein	complement(2607563..2608375)	Shewanella sp. MR-4	4252752
YP_734310.1	CDS	Shewmr4_2180	NC_008321.1	2608507	2609214	R	KEGG: son:SO2584 hypothetical protein; hypothetical protein	complement(2608507..2609214)	Shewanella sp. MR-4	4252753
YP_734311.1	CDS	Shewmr4_2181	NC_008321.1	2609207	2609515	R	KEGG: son:SO2585 hypothetical protein; hypothetical protein	complement(2609207..2609515)	Shewanella sp. MR-4	4252754
YP_734312.1	CDS	Shewmr4_2182	NC_008321.1	2609658	2610368	R	PFAM: peptidase M22, glycoprotease; KEGG: son:SO2586 hypothetical protein; peptidase M22, glycoprotease	complement(2609658..2610368)	Shewanella sp. MR-4	4252755
YP_734313.1	CDS	Shewmr4_2183	NC_008321.1	2610741	2611739	D	catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase	2610741..2611739	Shewanella sp. MR-4	4252756
YP_734314.1	CDS	Shewmr4_2184	NC_008321.1	2611832	2612737	R	this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein	complement(2611832..2612737)	Shewanella sp. MR-4	4252757
YP_734315.1	CDS	Shewmr4_2185	NC_008321.1	2613115	2613954	D	PFAM: 2OG-Fe(II) oxygenase; KEGG: son:SO2589 isopenicillin-N synthase; 2OG-Fe(II) oxygenase	2613115..2613954	Shewanella sp. MR-4	4252758
YP_734316.1	CDS	rbgA	NC_008321.1	2614091	2615032	D	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase	2614091..2615032	Shewanella sp. MR-4	4252759
YP_734317.1	CDS	Shewmr4_2187	NC_008321.1	2615346	2615786	R	KEGG: pae:PA4801 hypothetical protein; hypothetical protein	complement(2615346..2615786)	Shewanella sp. MR-4	4252760
YP_734318.1	CDS	Shewmr4_2188	NC_008321.1	2616019	2616585	R	hypothetical protein	complement(2616019..2616585)	Shewanella sp. MR-4	4252761
YP_734319.1	CDS	Shewmr4_2189	NC_008321.1	2617240	2617755	R	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: son:SO2208 phosphotyrosine protein phosphatase; protein tyrosine phosphatase	complement(2617240..2617755)	Shewanella sp. MR-4	4252762
YP_734320.1	CDS	Shewmr4_2190	NC_008321.1	2617776	2618798	R	KEGG: sdn:Sden_0075 hypothetical protein; hypothetical protein	complement(2617776..2618798)	Shewanella sp. MR-4	4252763
YP_734321.1	CDS	Shewmr4_2191	NC_008321.1	2618901	2619809	R	catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase	complement(2618901..2619809)	Shewanella sp. MR-4	4252764
YP_734322.1	CDS	Shewmr4_2192	NC_008321.1	2620063	2620434	D	PFAM: diacylglycerol kinase; KEGG: son:SO2203 diacylglycerol kinase; diacylglycerol kinase	2620063..2620434	Shewanella sp. MR-4	4252765
YP_734323.1	CDS	Shewmr4_2193	NC_008321.1	2620583	2621443	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2202 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(2620583..2621443)	Shewanella sp. MR-4	4252766
YP_734324.1	CDS	Shewmr4_2194	NC_008321.1	2621552	2622004	D	PFAM: protein of unknown function DUF413; KEGG: son:SO2201 hypothetical protein; hypothetical protein	2621552..2622004	Shewanella sp. MR-4	4252767
YP_734325.1	CDS	Shewmr4_2195	NC_008321.1	2622025	2623035	D	TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO2200 ribosomal protein S6 modification protein, putative; alpha-L-glutamate ligase	2622025..2623035	Shewanella sp. MR-4	4252768
YP_734326.1	CDS	Shewmr4_2196	NC_008321.1	2623288	2624211	D	KEGG: son:SO2199 hypothetical protein; hypothetical protein	2623288..2624211	Shewanella sp. MR-4	4252769
YP_734327.1	CDS	Shewmr4_2197	NC_008321.1	2624267	2625892	R	PFAM: peptidase M28; KEGG: son:SO2198 hypothetical aminopeptidase; peptidase M28	complement(2624267..2625892)	Shewanella sp. MR-4	4252770
YP_734328.1	CDS	Shewmr4_2198	NC_008321.1	2626053	2627078	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2197 GGDEF family protein; diguanylate cyclase	2626053..2627078	Shewanella sp. MR-4	4252771
YP_734329.1	CDS	Shewmr4_2199	NC_008321.1	2627202	2627891	R	TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; KEGG: son:SO2196 LPXTG-site transpeptidase family protein; sortase family protein	complement(2627202..2627891)	Shewanella sp. MR-4	4252772
YP_734330.1	CDS	Shewmr4_2200	NC_008321.1	2627895	2630174	R	PFAM: von Willebrand factor, type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: son:SO2195 inter-alpha-trypsin inhibitor domain protein; vault protein inter-alpha-trypsin subunit	complement(2627895..2630174)	Shewanella sp. MR-4	4252773
YP_734331.1	CDS	Shewmr4_2201	NC_008321.1	2630220	2631014	R	PFAM: OmpA/MotB domain protein; KEGG: son:SO2194 OmpA family protein; OmpA/MotB domain-containing protein	complement(2630220..2631014)	Shewanella sp. MR-4	4252774
YP_734332.1	CDS	Shewmr4_2202	NC_008321.1	2631260	2631952	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2193 DNA-binding response regulator; two component transcriptional regulator	2631260..2631952	Shewanella sp. MR-4	4252775
YP_734333.1	CDS	Shewmr4_2203	NC_008321.1	2631985	2634144	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2192 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	2631985..2634144	Shewanella sp. MR-4	4252776
YP_734334.1	CDS	Shewmr4_2204	NC_008321.1	2634269	2635468	D	catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase	2634269..2635468	Shewanella sp. MR-4	4252777
YP_734335.1	CDS	Shewmr4_2205	NC_008321.1	2635581	2636096	R	PFAM: CreA family protein; KEGG: son:SO2190 creA protein; CreA family protein	complement(2635581..2636096)	Shewanella sp. MR-4	4252778
YP_734336.1	CDS	Shewmr4_2206	NC_008321.1	2636106	2637560	R	KEGG: son:SO2189 conserved hypothetical protein; putative chaperone	complement(2636106..2637560)	Shewanella sp. MR-4	4252779
YP_734337.1	CDS	Shewmr4_2207	NC_008321.1	2637885	2640047	D	PFAM: Polyphosphate kinase; KEGG: vvu:VV10464 polyphosphate kinase; polyphosphate kinase	2637885..2640047	Shewanella sp. MR-4	4252780
YP_734338.1	CDS	Shewmr4_2208	NC_008321.1	2640090	2641646	D	PFAM: Ppx/GppA phosphatase; KEGG: son:SO2185 exopolyphosphatase; Ppx/GppA phosphatase	2640090..2641646	Shewanella sp. MR-4	4252781
YP_734339.1	CDS	Shewmr4_2209	NC_008321.1	2641726	2642595	R	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sdn:Sden_2375 ion transport protein; Ion transport protein	complement(2641726..2642595)	Shewanella sp. MR-4	4252782
YP_734340.1	CDS	Shewmr4_2210	NC_008321.1	2642753	2643268	D	KEGG: son:SO2183 hypothetical protein; hypothetical protein	2642753..2643268	Shewanella sp. MR-4	4252783
YP_734341.1	CDS	Shewmr4_2211	NC_008321.1	2643366	2643980	D	PFAM: protein of unknown function DUF991; KEGG: son:SO2182 hypothetical protein; hypothetical protein	2643366..2643980	Shewanella sp. MR-4	4252784
YP_734342.1	CDS	Shewmr4_2212	NC_008321.1	2644209	2644469	D	KEGG: son:SO2181 hypothetical protein; hypothetical protein	2644209..2644469	Shewanella sp. MR-4	4252785
YP_734343.1	CDS	Shewmr4_2213	NC_008321.1	2644666	2645022	D	KEGG: xcv:XCV0313 hypothetical protein; hypothetical protein	2644666..2645022	Shewanella sp. MR-4	4252786
YP_734344.1	CDS	Shewmr4_2214	NC_008321.1	2645143	2646048	R	PFAM: peptidase M23B; KEGG: son:SO2180 peptidase, M23/M37 family; peptidase M23B	complement(2645143..2646048)	Shewanella sp. MR-4	4252787
YP_734345.1	CDS	Shewmr4_2215	NC_008321.1	2646116	2646991	R	KEGG: son:SO2179 hypothetical protein; hypothetical protein	complement(2646116..2646991)	Shewanella sp. MR-4	4252788
YP_734346.1	CDS	Shewmr4_2216	NC_008321.1	2647574	2648575	D	PFAM: Di-haem cytochrome c peroxidase; KEGG: son:SO2178 cytochrome c551 peroxidase; cytochrome-c peroxidase	2647574..2648575	Shewanella sp. MR-4	4252789
YP_734347.1	CDS	Shewmr4_2217	NC_008321.1	2648714	2649742	R	PFAM: 37kDa nucleoid-associated protein; KEGG: son:SO2177 hypothetical protein; nucleoid-associated protein NdpA	complement(2648714..2649742)	Shewanella sp. MR-4	4252790
YP_734348.2	CDS	Shewmr4_2218	NC_008321.1	2649820	2650038	D	PFAM: protein of unknown function DUF1414; KEGG: son:SO2176 hypothetical protein; hypothetical protein	2649820..2650038	Shewanella sp. MR-4	4252791
YP_734349.1	CDS	Shewmr4_2219	NC_008321.1	2650105	2651895	D	PFAM: sulfatase; KEGG: son:SO2175 hypothetical protein; sulfatase	2650105..2651895	Shewanella sp. MR-4	4252792
YP_734350.1	CDS	Shewmr4_2220	NC_008321.1	2652023	2653135	R	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B0715 NADH-flavin oxidoreductase / NADH oxidase familyprotein; NADH:flavin oxidoreductase/NADH oxidase	complement(2652023..2653135)	Shewanella sp. MR-4	4252793
YP_734351.1	CDS	Shewmr4_2221	NC_008321.1	2653237	2654103	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sde:Sde_2875 transcriptional regulator, LysR family; LysR family transcriptional regulator	2653237..2654103	Shewanella sp. MR-4	4252794
YP_734352.1	CDS	Shewmr4_2222	NC_008321.1	2654286	2655224	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2174 cyclic nucleotide phosphodiesterase, putative; diguanylate cyclase	2654286..2655224	Shewanella sp. MR-4	4252795
YP_734353.1	CDS	Shewmr4_2223	NC_008321.1	2655427	2656092	R	two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL	complement(2655427..2656092)	Shewanella sp. MR-4	4252796
YP_734354.1	CDS	Shewmr4_2224	NC_008321.1	2656085	2657854	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: eca:ECA2029 nitrate/nitrite sensor kinase; nitrate/nitrite sensor protein NarX	complement(2656085..2657854)	Shewanella sp. MR-4	4252797
YP_734355.1	CDS	Shewmr4_2225	NC_008321.1	2658257	2659675	D	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbo:SBO_1843 nitrite extrusion protein; nitrite transporter	2658257..2659675	Shewanella sp. MR-4	4252798
YP_734356.1	CDS	Shewmr4_2226	NC_008321.1	2660082	2663846	D	TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eci:UTI89_C1421 respiratory nitrate reductase 1 alpha chain; respiratory nitrate reductase subunit alpha apoprotein	2660082..2663846	Shewanella sp. MR-4	4252799
YP_734357.1	CDS	Shewmr4_2227	NC_008321.1	2663849	2665387	D	KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; TIGRFAM: nitrate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; respiratory nitrate reductase subunit beta	2663849..2665387	Shewanella sp. MR-4	4252800
YP_734358.1	CDS	Shewmr4_2228	NC_008321.1	2665393	2666103	D	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: eca:ECA2033 respiratory nitrate reductase 1 delta chain; respiratory nitrate reductase chaperone NarJ	2665393..2666103	Shewanella sp. MR-4	4252801
YP_734359.1	CDS	Shewmr4_2229	NC_008321.1	2666106	2666789	D	TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: stt:t1670 respiratory nitrate reductase 1 gamma chain; respiratory nitrate reductase subunit gamma	2666106..2666789	Shewanella sp. MR-4	4252802
YP_734360.1	CDS	Shewmr4_2230	NC_008321.1	2666953	2667312	D	KEGG: son:SO2174 cyclic nucleotide phosphodiesterase, putative; hypothetical protein	2666953..2667312	Shewanella sp. MR-4	4252803
YP_734361.1	CDS	Shewmr4_2231	NC_008321.1	2667600	2668535	R	hypothetical protein	complement(2667600..2668535)	Shewanella sp. MR-4	4252804
YP_734362.1	CDS	Shewmr4_2232	NC_008321.1	2669115	2669333	D	PFAM: transposase IS3/IS911 family protein; KEGG: ilo:IL1626 transposon related ORF, HTH transcriptional regulator; transposase IS3/IS911 family protein	2669115..2669333	Shewanella sp. MR-4	4252805
YP_734363.1	CDS	Shewmr4_2234	NC_008321.1	2670121	2671137	R	PFAM: Fimbrial protein; KEGG: bpm:BURPS1710b_2230 type-1 fimbrial protein, A subunit; fimbrial protein	complement(2670121..2671137)	Shewanella sp. MR-4	4252806
YP_734364.1	CDS	Shewmr4_2235	NC_008321.1	2671234	2673693	R	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: xfa:XF0081 outer membrane usher protein precursor; fimbrial biogenesis outer membrane usher protein	complement(2671234..2673693)	Shewanella sp. MR-4	4252807
YP_734365.1	CDS	Shewmr4_2236	NC_008321.1	2673696	2674397	R	PFAM: pili assembly chaperone; KEGG: rme:Rmet_4251 pili assembly chaperone; pili assembly chaperone	complement(2673696..2674397)	Shewanella sp. MR-4	4252808
YP_734366.1	CDS	Shewmr4_2237	NC_008321.1	2674465	2675013	R	PFAM: Fimbrial protein; KEGG: reu:Reut_A1694 fimbrial protein; fimbrial protein	complement(2674465..2675013)	Shewanella sp. MR-4	4252809
YP_734367.1	CDS	Shewmr4_2238	NC_008321.1	2676245	2677228	D	PFAM: Fimbrial protein; KEGG: bpm:BURPS1710b_2230 type-1 fimbrial protein, A subunit; fimbrial protein	2676245..2677228	Shewanella sp. MR-4	4252810
YP_734368.1	CDS	Shewmr4_2240	NC_008321.1	2678296	2679498	D	PFAM: transposase, IS4 family protein; KEGG: sdn:Sden_3325 transposase, IS4; IS4 family transposase	2678296..2679498	Shewanella sp. MR-4	4252811
YP_734369.1	CDS	Shewmr4_2241	NC_008321.1	2679723	2680718	R	PFAM: Fimbrial protein; KEGG: rme:Rmet_4253 fimbrial protein; fimbrial protein	complement(2679723..2680718)	Shewanella sp. MR-4	4252812
YP_734370.1	CDS	Shewmr4_2242	NC_008321.1	2680892	2681614	D	PFAM: EAL domain protein; KEGG: son:SOA0109 hypothetical protein; diguanylate phosphodiesterase	2680892..2681614	Shewanella sp. MR-4	4252813
YP_734371.1	CDS	Shewmr4_2243	NC_008321.1	2682324	2684504	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: sdn:Sden_1435 GGDEF domain; diguanylate cyclase	2682324..2684504	Shewanella sp. MR-4	4252814
YP_734372.1	CDS	Shewmr4_2244	NC_008321.1	2684501	2685967	R	KEGG: son:SO2024 hypothetical protein; hypothetical protein	complement(2684501..2685967)	Shewanella sp. MR-4	4252815
YP_734373.1	CDS	Shewmr4_2245	NC_008321.1	2686132	2686668	D	KEGG: son:SO2022 hypothetical protein; hypothetical protein	2686132..2686668	Shewanella sp. MR-4	4252816
YP_734374.1	CDS	nadE	NC_008321.1	2686847	2687737	R	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase	complement(2686847..2687737)	Shewanella sp. MR-4	4252817
YP_734375.1	CDS	Shewmr4_2247	NC_008321.1	2687887	2689191	R	PFAM: PfkB domain protein; KEGG: son:SO2020 inosine-guanosine kinase; inosine-guanosine kinase	complement(2687887..2689191)	Shewanella sp. MR-4	4252818
YP_734376.1	CDS	hemH	NC_008321.1	2689382	2690428	R	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase	complement(2689382..2690428)	Shewanella sp. MR-4	4252819
YP_734377.1	CDS	adk	NC_008321.1	2690508	2691152	R	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase	complement(2690508..2691152)	Shewanella sp. MR-4	4252820
YP_734378.1	CDS	Shewmr4_2250	NC_008321.1	2691294	2692157	R	PFAM: Thioredoxin domain; KEGG: son:SO2017 putative thioredoxin-like protein; thioredoxin domain-containing protein	complement(2691294..2692157)	Shewanella sp. MR-4	4252821
YP_734379.1	CDS	Shewmr4_2251	NC_008321.1	2692275	2694188	R	molecular chaperone; heat shock protein 90	complement(2692275..2694188)	Shewanella sp. MR-4	4252822
YP_734380.1	CDS	recR	NC_008321.1	2694479	2695078	R	involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR	complement(2694479..2695078)	Shewanella sp. MR-4	4252823
YP_734381.1	CDS	Shewmr4_2253	NC_008321.1	2695091	2695426	R	PFAM: conserved hypothetical protein 103; KEGG: son:SO2014 conserved hypothetical protein TIGR00103; hypothetical protein	complement(2695091..2695426)	Shewanella sp. MR-4	4252824
YP_734382.1	CDS	Shewmr4_2254	NC_008321.1	2695591	2698806	R	KEGG: son:SO2013 DNA polymerase III, gamma and tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau	complement(2695591..2698806)	Shewanella sp. MR-4	4252825
YP_734383.1	CDS	Shewmr4_2255	NC_008321.1	2698936	2699487	R	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase	complement(2698936..2699487)	Shewanella sp. MR-4	4252826
YP_734384.1	CDS	Shewmr4_2256	NC_008321.1	2699668	2700036	R	PFAM: protein of unknown function DUF454; KEGG: son:SO2011 hypothetical protein; hypothetical protein	complement(2699668..2700036)	Shewanella sp. MR-4	4252827
YP_734385.1	CDS	Shewmr4_2257	NC_008321.1	2700137	2700259	R	KEGG: son:SO2010 hypothetical protein; hypothetical protein	complement(2700137..2700259)	Shewanella sp. MR-4	4252828
YP_734386.1	CDS	Shewmr4_2258	NC_008321.1	2700416	2701156	R	KEGG: son:SO2009 hypothetical protein; hypothetical protein	complement(2700416..2701156)	Shewanella sp. MR-4	4252829
YP_734387.1	CDS	Shewmr4_2259	NC_008321.1	2701156	2701995	R	PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: son:SO2008 hypothetical protein; hypothetical protein	complement(2701156..2701995)	Shewanella sp. MR-4	4252830
YP_734388.1	CDS	Shewmr4_2260	NC_008321.1	2702130	2702561	R	KEGG: son:SO2007 hypothetical protein; hypothetical protein	complement(2702130..2702561)	Shewanella sp. MR-4	4252831
YP_734389.1	CDS	Shewmr4_2261	NC_008321.1	2702821	2703768	D	PFAM: dihydrouridine synthase, DuS; KEGG: son:SO2006 NifR3/Smm1 family protein; dihydrouridine synthase, DuS	2702821..2703768	Shewanella sp. MR-4	4252832
YP_734390.1	CDS	Shewmr4_2262	NC_008321.1	2703932	2704291	D	KEGG: son:SO2005 DksA-type zinc finger protein; TraR/DksA family transcriptional regulator	2703932..2704291	Shewanella sp. MR-4	4252833
YP_734391.1	CDS	Shewmr4_2263	NC_008321.1	2704608	2707256	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2469 putative iron complex outermembrane recepter protein; TonB-dependent receptor	complement(2704608..2707256)	Shewanella sp. MR-4	4252834
YP_734392.1	CDS	ushA	NC_008321.1	2707704	2709425	R	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor	complement(2707704..2709425)	Shewanella sp. MR-4	4252835
YP_734393.1	CDS	Shewmr4_2265	NC_008321.1	2709790	2710455	R	PFAM: phospholipase/Carboxylesterase; KEGG: son:SO1999 phospholipase/carboxylesterase family protein; carboxylesterase	complement(2709790..2710455)	Shewanella sp. MR-4	4252836
YP_734394.1	CDS	Shewmr4_2266	NC_008321.1	2710508	2710735	R	KEGG: son:SO1998 hypothetical protein; hypothetical protein	complement(2710508..2710735)	Shewanella sp. MR-4	4252837
YP_734395.1	CDS	Shewmr4_2267	NC_008321.1	2711122	2713050	D	PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1997 peptidase, M1 family; peptidase M1, membrane alanine aminopeptidase	2711122..2713050	Shewanella sp. MR-4	4252838
YP_734396.1	CDS	Shewmr4_2268	NC_008321.1	2713339	2713827	R	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1995 peptidyl-prolyl cis-trans isomerase, FkbP family; peptidylprolyl isomerase, FKBP-type	complement(2713339..2713827)	Shewanella sp. MR-4	4252839
YP_734397.1	CDS	Shewmr4_2269	NC_008321.1	2714036	2715310	R	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO1994 membrane-bound lytic transglycolase-related protein; lytic murein transglycosylase	complement(2714036..2715310)	Shewanella sp. MR-4	4252840
YP_734398.1	CDS	Shewmr4_2270	NC_008321.1	2715735	2716094	D	KEGG: son:SO1991 hypothetical protein; hypothetical protein	2715735..2716094	Shewanella sp. MR-4	4252841
YP_734399.1	CDS	Shewmr4_2271	NC_008321.1	2716152	2716793	D	KEGG: son:SO1990 hypothetical protein; hypothetical protein	2716152..2716793	Shewanella sp. MR-4	4252842
YP_734400.1	CDS	Shewmr4_2272	NC_008321.1	2716896	2717840	R	PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO1989 chemotaxis protein CheV; response regulator receiver modulated CheW protein	complement(2716896..2717840)	Shewanella sp. MR-4	4252843
YP_734401.1	CDS	Shewmr4_2273	NC_008321.1	2718042	2718656	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1988 hypothetical methyltransferase; type 11 methyltransferase	complement(2718042..2718656)	Shewanella sp. MR-4	4252844
YP_734402.1	CDS	Shewmr4_2274	NC_008321.1	2718753	2719304	D	PFAM: peptidase S16, lon domain protein; KEGG: son:SO1987 ATP-dependent protease La (LON) domain protein; peptidase S16, lon domain-containing protein	2718753..2719304	Shewanella sp. MR-4	4252845
YP_734403.1	CDS	Shewmr4_2275	NC_008321.1	2719426	2720094	D	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO1986 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor	2719426..2720094	Shewanella sp. MR-4	4252846
YP_734404.1	CDS	Shewmr4_2276	NC_008321.1	2720087	2720782	D	TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: son:SO1985 transcriptional activator, putative; anti-ECFsigma factor, ChrR	2720087..2720782	Shewanella sp. MR-4	4252847
YP_734405.1	CDS	Shewmr4_2277	NC_008321.1	2721298	2721480	D	KEGG: sdn:Sden_2145 hypothetical protein; hypothetical protein	2721298..2721480	Shewanella sp. MR-4	4252848
YP_734406.1	CDS	Shewmr4_2278	NC_008321.1	2721756	2722016	D	KEGG: ilo:IL0185 hypothetical protein; hypothetical protein	2721756..2722016	Shewanella sp. MR-4	4252849
YP_734407.1	CDS	Shewmr4_2279	NC_008321.1	2722020	2722997	R	KEGG: son:SO1978 hypothetical protein; hypothetical protein	complement(2722020..2722997)	Shewanella sp. MR-4	4252850
YP_734408.1	CDS	Shewmr4_2280	NC_008321.1	2723253	2723660	D	PFAM: protein of unknown function DUF307; KEGG: son:SO1977 hypothetical protein; hypothetical protein	2723253..2723660	Shewanella sp. MR-4	4252851
YP_734409.1	CDS	Shewmr4_2281	NC_008321.1	2723749	2724585	R	PFAM: alpha/beta hydrolase fold; KEGG: son:SO1976 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein	complement(2723749..2724585)	Shewanella sp. MR-4	4252852
YP_734410.1	CDS	Shewmr4_2282	NC_008321.1	2724585	2725625	R	KEGG: son:SO1975 zinc carboxypeptidase-related protein; zinc carboxypeptidase-like protein	complement(2724585..2725625)	Shewanella sp. MR-4	4252853
YP_734411.1	CDS	Shewmr4_2283	NC_008321.1	2725731	2726483	R	KEGG: son:SO1973 hypothetical ABC transporter protein; ABC transporter	complement(2725731..2726483)	Shewanella sp. MR-4	4252854
YP_734412.1	CDS	Shewmr4_2284	NC_008321.1	2726734	2727000	D	KEGG: noc:Noc_2152 integral membrane protein TerC; integral membrane protein TerC	2726734..2727000	Shewanella sp. MR-4	4252855
YP_734413.1	CDS	Shewmr4_2285	NC_008321.1	2727063	2728775	R	activates fatty acids by binding to coenzyme A; AMP-binding domain protein	complement(2727063..2728775)	Shewanella sp. MR-4	4252856
YP_734414.1	CDS	Shewmr4_2286	NC_008321.1	2728904	2729284	R	KEGG: son:SO1970 hypothetical protein; hypothetical protein	complement(2728904..2729284)	Shewanella sp. MR-4	4252857
YP_734415.1	CDS	Shewmr4_2287	NC_008321.1	2729586	2730047	D	PFAM: protein of unknown function DUF55; KEGG: son:SO1969 hypothetical protein; hypothetical protein	2729586..2730047	Shewanella sp. MR-4	4252858
YP_734416.1	CDS	Shewmr4_2288	NC_008321.1	2730128	2730460	D	KEGG: son:SO1968 hypothetical protein; hypothetical protein	2730128..2730460	Shewanella sp. MR-4	4252859
YP_734417.1	CDS	Shewmr4_2289	NC_008321.1	2730527	2731321	R	PFAM: protein of unknown function DUF124; KEGG: son:SO1966 conserved hypothetical protein TIGR00266; hypothetical protein	complement(2730527..2731321)	Shewanella sp. MR-4	4252860
YP_734418.1	CDS	Shewmr4_2290	NC_008321.1	2731482	2732396	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1965 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(2731482..2732396)	Shewanella sp. MR-4	4252861
YP_734419.1	CDS	Shewmr4_2291	NC_008321.1	2732611	2733771	D	PFAM: homogentisate 1,2-dioxygenase; KEGG: son:SO1963 homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygenase	2732611..2733771	Shewanella sp. MR-4	4252862
YP_734420.1	CDS	Shewmr4_2292	NC_008321.1	2733885	2734925	D	KEGG: son:SO1962 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase	2733885..2734925	Shewanella sp. MR-4	4252863
YP_734421.1	CDS	Shewmr4_2293	NC_008321.1	2735119	2736522	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: dvu:DVU3106 GGDEF domain protein; diguanylate cyclase	complement(2735119..2736522)	Shewanella sp. MR-4	4252864
YP_734422.1	CDS	Shewmr4_2294	NC_008321.1	2736699	2737262	R	PFAM: transferase hexapeptide repeat containing protein; KEGG: son:SO1961 maltose O-acetyltransferase; hexapaptide repeat-containing transferase	complement(2736699..2737262)	Shewanella sp. MR-4	4252865
YP_734423.1	CDS	Shewmr4_2295	NC_008321.1	2737595	2738218	D	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO1954 transporter, LysE family; lysine exporter protein LysE/YggA	2737595..2738218	Shewanella sp. MR-4	4252866
YP_734424.1	CDS	Shewmr4_2296	NC_008321.1	2738331	2739596	R	PFAM: protein of unknown function DUF482; KEGG: son:SO1953 hypothetical protein; hypothetical protein	complement(2738331..2739596)	Shewanella sp. MR-4	4252867
YP_734425.1	CDS	Shewmr4_2297	NC_008321.1	2739706	2741445	D	KEGG: son:SO1952 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1	2739706..2741445	Shewanella sp. MR-4	4252868
YP_734426.1	CDS	Shewmr4_2298	NC_008321.1	2742742	2743167	R	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: cvi:CV3059 hypothetical protein; glutathione-dependent formaldehyde-activating, GFA	complement(2742742..2743167)	Shewanella sp. MR-4	4252869
YP_734427.1	CDS	Shewmr4_2299	NC_008321.1	2743507	2744484	R	PFAM: protein of unknown function DUF1568; KEGG: son:SO3447 hypothetical protein; hypothetical protein	complement(2743507..2744484)	Shewanella sp. MR-4	4252870
YP_734428.1	CDS	Shewmr4_2300	NC_008321.1	2745435	2745815	R	hypothetical protein	complement(2745435..2745815)	Shewanella sp. MR-4	4252871
YP_734429.1	CDS	Shewmr4_2301	NC_008321.1	2746688	2748289	R	KEGG: cps:CPS_1363 putative dipeptidase; TIGRFAM: dipeptidase, putative; PFAM: peptidase M20; hypothetical protein	complement(2746688..2748289)	Shewanella sp. MR-4	4252872
YP_734430.1	CDS	Shewmr4_2302	NC_008321.1	2748563	2750791	D	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: sdn:Sden_1597 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp	2748563..2750791	Shewanella sp. MR-4	4252873
YP_734431.1	CDS	Shewmr4_2303	NC_008321.1	2750890	2751387	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2707 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(2750890..2751387)	Shewanella sp. MR-4	4252874
YP_734432.1	CDS	Shewmr4_2304	NC_008321.1	2751422	2751970	R	PFAM: nitroreductase; KEGG: son:SO2708 nitroreductase family protein; nitroreductase	complement(2751422..2751970)	Shewanella sp. MR-4	4252875
YP_734433.1	CDS	Shewmr4_2305	NC_008321.1	2752099	2752707	R	PFAM: DoxX family protein; KEGG: son:SO2710 hypothetical protein; DoxX family protein	complement(2752099..2752707)	Shewanella sp. MR-4	4252876
YP_734434.1	CDS	Shewmr4_2306	NC_008321.1	2752743	2753615	R	KEGG: son:SO2711 hypothetical protein; hypothetical protein	complement(2752743..2753615)	Shewanella sp. MR-4	4252877
YP_734435.1	CDS	Shewmr4_2307	NC_008321.1	2753726	2754955	R	PFAM: aminoglycoside phosphotransferase; KEGG: son:SO2712 hypothetical protein; aminoglycoside phosphotransferase	complement(2753726..2754955)	Shewanella sp. MR-4	4252878
YP_734436.1	CDS	Shewmr4_2308	NC_008321.1	2755046	2755711	R	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: son:SO2713 transporter, putative; nicotinamide mononucleotide transporter PnuC	complement(2755046..2755711)	Shewanella sp. MR-4	4252879
YP_734437.1	CDS	Shewmr4_2309	NC_008321.1	2755780	2756040	R	KEGG: son:SO2714 hypothetical protein; hypothetical protein	complement(2755780..2756040)	Shewanella sp. MR-4	4252880
YP_734438.1	CDS	Shewmr4_2310	NC_008321.1	2756136	2758334	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2715 TonB-dependent receptor; TonB-dependent receptor	complement(2756136..2758334)	Shewanella sp. MR-4	4252881
YP_734439.1	CDS	Shewmr4_2311	NC_008321.1	2758670	2759062	R	PFAM: protein of unknown function DUF1425; KEGG: son:SO2720 hypothetical protein; hypothetical protein	complement(2758670..2759062)	Shewanella sp. MR-4	4252882
YP_734440.1	CDS	Shewmr4_2312	NC_008321.1	2759193	2759657	R	PFAM: thioesterase superfamily protein; KEGG: son:SO2721 hypothetical protein; thioesterase superfamily protein	complement(2759193..2759657)	Shewanella sp. MR-4	4252883
YP_734441.1	CDS	Shewmr4_2313	NC_008321.1	2759644	2760171	R	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: son:SO2722 hypothetical protein; hypothetical protein	complement(2759644..2760171)	Shewanella sp. MR-4	4252884
YP_734442.1	CDS	Shewmr4_2314	NC_008321.1	2760168	2760524	R	PFAM: histidine triad (HIT) protein; KEGG: son:SO2723 HIT family protein; histidine triad (HIT) protein	complement(2760168..2760524)	Shewanella sp. MR-4	4252885
YP_734443.1	CDS	Shewmr4_2315	NC_008321.1	2760670	2762436	D	PFAM: peptidase M61 domain protein; KEGG: son:SO2724 protease, putative; peptidase M61 domain-containing protein	2760670..2762436	Shewanella sp. MR-4	4252886
YP_734444.1	CDS	Shewmr4_2316	NC_008321.1	2762562	2763197	R	PFAM: regulatory protein, LuxR; KEGG: son:SO2725 transcriptional regulator, LuxR family; LuxR family transcriptional regulator	complement(2762562..2763197)	Shewanella sp. MR-4	4252887
YP_734445.1	CDS	Shewmr4_2317	NC_008321.1	2763493	2764239	D	PFAM: cytochrome B561; KEGG: son:SO2726 cytochrome b, putative; cytochrome B561	2763493..2764239	Shewanella sp. MR-4	4252888
YP_734446.1	CDS	Shewmr4_2318	NC_008321.1	2764311	2764661	R	KEGG: son:SO2727 cytochrome c3; cytochrome c3	complement(2764311..2764661)	Shewanella sp. MR-4	4252889
YP_734447.1	CDS	Shewmr4_2319	NC_008321.1	2764999	2766906	R	PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_4326 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase	complement(2764999..2766906)	Shewanella sp. MR-4	4252890
YP_734448.1	CDS	Shewmr4_2320	NC_008321.1	2767133	2768815	D	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO1899 hypothetical protein; peptidoglycan binding domain-containing protein	2767133..2768815	Shewanella sp. MR-4	4252891
YP_734449.1	CDS	Shewmr4_2321	NC_008321.1	2769087	2769491	D	PFAM: regulatory protein, MerR; KEGG: son:SO1898 transcriptional regulator, putative; MerR family transcriptional regulator	2769087..2769491	Shewanella sp. MR-4	4252892
YP_734450.1	CDS	Shewmr4_2322	NC_008321.1	2769645	2770814	D	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO1897 isovaleryl-CoA dehydrogenase; isovaleryl-CoA dehydrogenase	2769645..2770814	Shewanella sp. MR-4	4252893
YP_734451.1	CDS	Shewmr4_2323	NC_008321.1	2770915	2772522	D	PFAM: carboxyl transferase; KEGG: son:SO1896 3-methylcrotonyl-CoA carboxylase beta subunit; propionyl-CoA carboxylase	2770915..2772522	Shewanella sp. MR-4	4252894
YP_734452.1	CDS	Shewmr4_2324	NC_008321.1	2772567	2773412	D	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO1895 enoyl-CoA hydratase; methylglutaconyl-CoA hydratase	2772567..2773412	Shewanella sp. MR-4	4252895
YP_734453.1	CDS	Shewmr4_2325	NC_008321.1	2773412	2775451	D	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO1894 3-methylcrotonyl-CoA carboxylase alpha subunit; 3-methylcrotonoyl-CoA carboxylase subunit alpha	2773412..2775451	Shewanella sp. MR-4	4252896
YP_734454.1	CDS	Shewmr4_2326	NC_008321.1	2775452	2776399	D	PFAM: pyruvate carboxyltransferase; KEGG: son:SO1893 hydroxymethylglutaryl-CoA lyase; hydroxymethylglutaryl-CoA lyase	2775452..2776399	Shewanella sp. MR-4	4252897
YP_734455.1	CDS	Shewmr4_2327	NC_008321.1	2776468	2777172	D	KEGG: son:SO1892 acetate CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A	2776468..2777172	Shewanella sp. MR-4	4252898
YP_734456.1	CDS	Shewmr4_2328	NC_008321.1	2777295	2777951	D	KEGG: son:SO1891 3-oxoacid CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; butyryl-CoA:acetate CoA transferase	2777295..2777951	Shewanella sp. MR-4	4252899
YP_734457.1	CDS	Shewmr4_2329	NC_008321.1	2778731	2779126	D	hypothetical protein	2778731..2779126	Shewanella sp. MR-4	4252900
YP_734458.1	CDS	Shewmr4_2330	NC_008321.1	2779123	2780994	D	KEGG: sdn:Sden_3728 cadherin; hypothetical protein	2779123..2780994	Shewanella sp. MR-4	4252901
YP_734459.1	CDS	Shewmr4_2331	NC_008321.1	2781560	2782162	D	PFAM: ThiJ/PfpI domain protein; KEGG: son:SO1887 hypothetical protein; ThiJ/PfpI domain-containing protein	2781560..2782162	Shewanella sp. MR-4	4252902
YP_734460.1	CDS	Shewmr4_2332	NC_008321.1	2782194	2782505	D	KEGG: son:SO1886 hypothetical protein; hypothetical protein	2782194..2782505	Shewanella sp. MR-4	4252903
YP_734461.1	CDS	Shewmr4_2333	NC_008321.1	2782730	2783485	D	PFAM: protein of unknown function DUF81; KEGG: son:SO1884 membrane protein, putative; hypothetical protein	2782730..2783485	Shewanella sp. MR-4	4252904
YP_734462.1	CDS	Shewmr4_2334	NC_008321.1	2783559	2784242	D	PFAM: Negative transcriptional regulator; KEGG: sdn:Sden_3742 negative transcriptional regulator; negative transcriptional regulator	2783559..2784242	Shewanella sp. MR-4	4252905
YP_734463.1	CDS	Shewmr4_2335	NC_008321.1	2784242	2784682	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1883 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	2784242..2784682	Shewanella sp. MR-4	4252906
YP_734464.1	CDS	Shewmr4_2336	NC_008321.1	2784773	2785210	R	PFAM: transposase IS200-family protein; KEGG: vch:VCA0275 IS1004 transposase; transposase IS200-family protein	complement(2784773..2785210)	Shewanella sp. MR-4	4252907
YP_734465.1	CDS	Shewmr4_2337	NC_008321.1	2785386	2788481	R	PFAM: acriflavin resistance protein; KEGG: son:SO1882 AcrB/AcrD/AcrF family protein; acriflavin resistance protein	complement(2785386..2788481)	Shewanella sp. MR-4	4252908
YP_734466.1	CDS	Shewmr4_2338	NC_008321.1	2788478	2789560	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO1881 HlyD family-related protein; RND family efflux transporter MFP subunit	complement(2788478..2789560)	Shewanella sp. MR-4	4252909
YP_734467.1	CDS	Shewmr4_2339	NC_008321.1	2789933	2791030	R	PFAM: NlpBDapX family lipoprotein; KEGG: son:SO1880 lipoprotein-34 NlpB; NlpB/DapX family lipoprotein	complement(2789933..2791030)	Shewanella sp. MR-4	4252910
YP_734468.1	CDS	Shewmr4_2340	NC_008321.1	2791034	2791918	R	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase	complement(2791034..2791918)	Shewanella sp. MR-4	4252911
YP_734469.1	CDS	Shewmr4_2341	NC_008321.1	2792091	2792642	D	KEGG: son:SO1878 glycine cleavage system transcriptional repressor, putative; glycine cleavage system transcriptional repressor	2792091..2792642	Shewanella sp. MR-4	4252912
YP_734470.1	CDS	bcp	NC_008321.1	2792646	2793113	D	bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase	2792646..2793113	Shewanella sp. MR-4	4252913
YP_734471.1	CDS	Shewmr4_2343	NC_008321.1	2793294	2793908	R	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO2865 L-lysine exporter, putative; lysine exporter protein LysE/YggA	complement(2793294..2793908)	Shewanella sp. MR-4	4252914
YP_734472.1	CDS	Shewmr4_2344	NC_008321.1	2794021	2794938	D	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein	2794021..2794938	Shewanella sp. MR-4	4252915
YP_734473.1	CDS	Shewmr4_2345	NC_008321.1	2795066	2796166	R	PFAM: protein of unknown function UPF0118; KEGG: son:SO2867 permease PerM, putative; hypothetical protein	complement(2795066..2796166)	Shewanella sp. MR-4	4252916
YP_734474.1	CDS	Shewmr4_2346	NC_008321.1	2796375	2796608	R	PFAM: SirA family protein; KEGG: son:SO2868 hypothetical protein; SirA family protein	complement(2796375..2796608)	Shewanella sp. MR-4	4252917
YP_734475.1	CDS	Shewmr4_2347	NC_008321.1	2796721	2798190	D	PFAM: peptidase M48, Ste24p; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO2869 hypothetical protein; peptidase M48, Ste24p	2796721..2798190	Shewanella sp. MR-4	4252918
YP_734476.1	CDS	Shewmr4_2348	NC_008321.1	2798314	2798664	D	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: son:SO2871 arsenate reductase, putative; arsenate reductase	2798314..2798664	Shewanella sp. MR-4	4252919
YP_734477.1	CDS	Shewmr4_2349	NC_008321.1	2798712	2799092	D	KEGG: son:SO2872 hypothetical protein; hypothetical protein	2798712..2799092	Shewanella sp. MR-4	4252920
YP_734478.1	CDS	Shewmr4_2350	NC_008321.1	2799519	2801474	D	KEGG: son:SO2876 hypothetical protein; hypothetical protein	2799519..2801474	Shewanella sp. MR-4	4252921
YP_734479.1	CDS	Shewmr4_2351	NC_008321.1	2801611	2802474	R	putative metalloprotease; heat shock protein HtpX	complement(2801611..2802474)	Shewanella sp. MR-4	4252922
YP_734480.1	CDS	Shewmr4_2352	NC_008321.1	2802762	2803472	D	alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E	2802762..2803472	Shewanella sp. MR-4	4252923
YP_734481.1	CDS	mdoG	NC_008321.1	2803881	2805464	D	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G	2803881..2805464	Shewanella sp. MR-4	4252924
YP_734482.1	CDS	Shewmr4_2354	NC_008321.1	2805850	2805999	D	KEGG: son:SO2735 hypothetical protein; hypothetical protein	2805850..2805999	Shewanella sp. MR-4	4252925
YP_734483.1	CDS	Shewmr4_2355	NC_008321.1	2806142	2807110	D	KEGG: son:SO2736 hypothetical protein; hypothetical protein	2806142..2807110	Shewanella sp. MR-4	4252926
YP_734484.1	CDS	bioD	NC_008321.1	2807196	2807891	R	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase	complement(2807196..2807891)	Shewanella sp. MR-4	4252927
YP_734485.1	CDS	Shewmr4_2357	NC_008321.1	2807934	2808761	R	TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO2738 biotin synthesis protein BioC; biotin biosynthesis protein BioC	complement(2807934..2808761)	Shewanella sp. MR-4	4252928
YP_734486.1	CDS	Shewmr4_2358	NC_008321.1	2808916	2810136	R	PFAM: aminotransferase, class I and II; aminotransferase class-III; KEGG: son:SO2739 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase	complement(2808916..2810136)	Shewanella sp. MR-4	4252929
YP_734487.1	CDS	Shewmr4_2359	NC_008321.1	2810353	2811405	R	KEGG: son:SO2740 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase	complement(2810353..2811405)	Shewanella sp. MR-4	4252930
YP_734488.1	CDS	Shewmr4_2360	NC_008321.1	2811528	2812892	D	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: son:SO2741 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; aminotransferase	2811528..2812892	Shewanella sp. MR-4	4252931
YP_734489.1	CDS	Shewmr4_2361	NC_008321.1	2812911	2816351	R	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2742 sensor histidine kinase/response regulator; multi-sensor hybrid histidine kinase	complement(2812911..2816351)	Shewanella sp. MR-4	4252932
YP_734490.1	CDS	Shewmr4_2362	NC_008321.1	2816527	2818479	D	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase	2816527..2818479	Shewanella sp. MR-4	4252933
YP_734491.1	CDS	Shewmr4_2363	NC_008321.1	2818706	2820478	D	PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO2744 helicase; type III restriction enzyme, res subunit	2818706..2820478	Shewanella sp. MR-4	4252934
YP_734492.1	CDS	grxA	NC_008321.1	2820539	2820799	D	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 1	2820539..2820799	Shewanella sp. MR-4	4252935
YP_734493.1	CDS	Shewmr4_2365	NC_008321.1	2820859	2822022	R	KEGG: pha:PSHAa0696 hypothetical protein; hypothetical protein	complement(2820859..2822022)	Shewanella sp. MR-4	4252936
YP_734494.1	CDS	Shewmr4_2366	NC_008321.1	2823354	2824106	R	KEGG: son:SO2746 hypothetical protein; hypothetical protein	complement(2823354..2824106)	Shewanella sp. MR-4	4252937
YP_734495.1	CDS	Shewmr4_2367	NC_008321.1	2824131	2824667	R	PFAM: OmpA/MotB domain protein; KEGG: son:SO2747 peptidoglycan-associated lipoprotein; OmpA/MotB domain-containing protein	complement(2824131..2824667)	Shewanella sp. MR-4	4252938
YP_734496.1	CDS	tolB	NC_008321.1	2824714	2826042	R	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB	complement(2824714..2826042)	Shewanella sp. MR-4	4252939
YP_734497.1	CDS	Shewmr4_2369	NC_008321.1	2826052	2827074	R	PFAM: TolA family protein; KEGG: son:SO2749 tolA protein; TolA family protein	complement(2826052..2827074)	Shewanella sp. MR-4	4252940
YP_734498.1	CDS	Shewmr4_2370	NC_008321.1	2827075	2827509	R	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO2750 tolr protein; biopolymer transport protein ExbD/TolR	complement(2827075..2827509)	Shewanella sp. MR-4	4252941
YP_734499.1	CDS	Shewmr4_2371	NC_008321.1	2827509	2828195	R	PFAM: MotA/TolQ/ExbB proton channel; KEGG: son:SO2751 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel	complement(2827509..2828195)	Shewanella sp. MR-4	4252942
YP_734500.1	CDS	Shewmr4_2372	NC_008321.1	2828185	2828586	R	TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: son:SO2752 conserved hypothetical protein TIGR00051; 4-hydroxybenzoyl-CoA thioesterase	complement(2828185..2828586)	Shewanella sp. MR-4	4252943
YP_734501.1	CDS	Shewmr4_2373	NC_008321.1	2828757	2830940	R	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO2753 prolyl endopeptidase; prolyl oligopeptidase	complement(2828757..2830940)	Shewanella sp. MR-4	4252944
YP_734502.1	CDS	Shewmr4_2374	NC_008321.1	2831732	2832604	R	PFAM: OmpA/MotB domain protein; KEGG: sdn:Sden_1398 OmpA/MotB; OmpA/MotB domain-containing protein	complement(2831732..2832604)	Shewanella sp. MR-4	4252945
YP_734503.1	CDS	Shewmr4_2375	NC_008321.1	2832747	2833415	D	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T	2832747..2833415	Shewanella sp. MR-4	4252946
YP_734504.1	CDS	Shewmr4_2376	NC_008321.1	2833499	2834104	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sdn:Sden_2091 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen	complement(2833499..2834104)	Shewanella sp. MR-4	4252947
YP_734505.1	CDS	Shewmr4_2377	NC_008321.1	2834475	2835794	D	PFAM: Gluconate transporter; Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO2757 membrane protein, putative; Na+/H+ antiporter NhaC	2834475..2835794	Shewanella sp. MR-4	4252948
YP_734506.1	CDS	Shewmr4_2378	NC_008321.1	2835868	2836533	R	PFAM: RDD domain containing protein; KEGG: cac:CAC2792 uncharacterized conserved membrane protein, YXAI B.subtilis homolog; RDD domain-containing protein	complement(2835868..2836533)	Shewanella sp. MR-4	4252949
YP_734507.1	CDS	upp	NC_008321.1	2836757	2837383	R	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase	complement(2836757..2837383)	Shewanella sp. MR-4	4252950
YP_734508.1	CDS	Shewmr4_2380	NC_008321.1	2837711	2838748	D	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase	2837711..2838748	Shewanella sp. MR-4	4252951
YP_734509.1	CDS	purN	NC_008321.1	2838748	2839392	D	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase	2838748..2839392	Shewanella sp. MR-4	4252952
YP_734510.1	CDS	Shewmr4_2382	NC_008321.1	2839534	2840280	D	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO2762 nagD protein; UMP phosphatase	2839534..2840280	Shewanella sp. MR-4	4252953
YP_734511.1	CDS	Shewmr4_2383	NC_008321.1	2840478	2842151	D	PFAM: peptidase M20; peptidase M28; KEGG: son:SO2766 hypothetical protein; peptidase M28	2840478..2842151	Shewanella sp. MR-4	4252954
YP_734512.1	CDS	asnB	NC_008321.1	2842621	2844285	D	functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B	2842621..2844285	Shewanella sp. MR-4	4252955
YP_734513.1	CDS	Shewmr4_2385	NC_008321.1	2844445	2845452	R	PFAM: Patatin; KEGG: pha:PSHAb0541 putative hydrolase similar to YjjU; patatin	complement(2844445..2845452)	Shewanella sp. MR-4	4252956
YP_734514.1	CDS	Shewmr4_2386	NC_008321.1	2845814	2848042	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xcb:XC_2846 iron receptor; TonB-dependent siderophore receptor	complement(2845814..2848042)	Shewanella sp. MR-4	4252957
YP_734515.1	CDS	Shewmr4_2387	NC_008321.1	2848303	2850093	R	PFAM: acyl-CoA dehydrogenase domain protein; KEGG: son:SO2768 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein	complement(2848303..2850093)	Shewanella sp. MR-4	4252958
YP_734516.1	CDS	Shewmr4_2388	NC_008321.1	2850320	2851168	D	PFAM: Aldose 1-epimerase; KEGG: son:SO2769 hypothetical protein; aldose 1-epimerase	2850320..2851168	Shewanella sp. MR-4	4252959
YP_734517.1	CDS	Shewmr4_2389	NC_008321.1	2851214	2852017	R	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region; integrase catalytic subunit	complement(2851214..2852017)	Shewanella sp. MR-4	4252960
YP_734518.1	CDS	Shewmr4_2390	NC_008321.1	2852047	2852442	R	KEGG: dde:Dde_2987 transposase; transposase	complement(2852047..2852442)	Shewanella sp. MR-4	4252961
YP_734519.1	CDS	Shewmr4_2391	NC_008321.1	2852564	2853439	R	PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: son:SO2771 2-hydroxy-3-oxopropionate reductase; 6-phosphogluconate dehydrogenase, NAD-binding	complement(2852564..2853439)	Shewanella sp. MR-4	4252962
YP_734520.1	CDS	Shewmr4_2392	NC_008321.1	2853782	2854261	R	PFAM: thioesterase superfamily protein; KEGG: son:SO2772 cytosolic long-chain acyl-CoA thioester hydrolase family protein; thioesterase superfamily protein	complement(2853782..2854261)	Shewanella sp. MR-4	4252963
YP_734521.1	CDS	Shewmr4_2393	NC_008321.1	2854378	2854746	R	KEGG: son:SO2773 hypothetical protein; hypothetical protein	complement(2854378..2854746)	Shewanella sp. MR-4	4252964
YP_734522.1	CDS	Shewmr4_2394	NC_008321.1	2854926	2856164	R	PFAM: beta-ketoacyl synthase; KEGG: son:SO2774 3-oxoacyl-(acyl-carrier-protein) synthase II; 3-oxoacyl-[acyl-carrier-protein] synthase II	complement(2854926..2856164)	Shewanella sp. MR-4	4252965
YP_734523.1	CDS	acpP	NC_008321.1	2856374	2856607	R	carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein	complement(2856374..2856607)	Shewanella sp. MR-4	4252966
YP_734524.1	CDS	Shewmr4_2396	NC_008321.1	2856771	2857517	R	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: son:SO2776 3-oxoacyl-[acyl-carrier protein] reductase; 3-oxoacyl-[acyl-carrier-protein] reductase	complement(2856771..2857517)	Shewanella sp. MR-4	4252967
YP_734525.1	CDS	Shewmr4_2397	NC_008321.1	2857527	2858453	R	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: son:SO2777 malonyl CoA-acyl carrier protein transacylase; [Acyl-carrier-protein] S-malonyltransferase	complement(2857527..2858453)	Shewanella sp. MR-4	4252968
YP_734526.1	CDS	Shewmr4_2398	NC_008321.1	2858558	2859517	R	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III	complement(2858558..2859517)	Shewanella sp. MR-4	4252969
YP_734527.1	CDS	Shewmr4_2399	NC_008321.1	2859527	2860555	R	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX	complement(2859527..2860555)	Shewanella sp. MR-4	4252970
YP_734528.1	CDS	rpmF	NC_008321.1	2860571	2860741	R	some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32	complement(2860571..2860741)	Shewanella sp. MR-4	4252971
YP_734529.1	CDS	Shewmr4_2401	NC_008321.1	2860759	2861283	R	PFAM: protein of unknown function DUF177; KEGG: son:SO2781 hypothetical protein; hypothetical protein	complement(2860759..2861283)	Shewanella sp. MR-4	4252972
YP_734530.1	CDS	Shewmr4_2402	NC_008321.1	2861541	2862155	D	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: son:SO2782 maf protein, putative; maf protein	2861541..2862155	Shewanella sp. MR-4	4252973
YP_734531.1	CDS	Shewmr4_2403	NC_008321.1	2862317	2863063	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sdn:Sden_2300 HAD-superfamily hydrolase subfamily IA, variant 3; HAD family hydrolase	complement(2862317..2863063)	Shewanella sp. MR-4	4252974
YP_734532.1	CDS	Shewmr4_2404	NC_008321.1	2863104	2864093	R	KEGG: sdn:Sden_2301 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase C	complement(2863104..2864093)	Shewanella sp. MR-4	4252975
YP_734533.1	CDS	Shewmr4_2405	NC_008321.1	2864659	2867940	D	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: son:SO2785 ribonuclease E; RNAse E	2864659..2867940	Shewanella sp. MR-4	4252976
YP_734534.1	CDS	Shewmr4_2406	NC_008321.1	2868067	2869644	D	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sdn:Sden_2303 sulphate transporter; sulfate transporter	2868067..2869644	Shewanella sp. MR-4	4252977
YP_734535.1	CDS	Shewmr4_2407	NC_008321.1	2870126	2870335	R	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: son:SO2787 cold shock domain family protein; cold-shock DNA-binding protein family protein	complement(2870126..2870335)	Shewanella sp. MR-4	4252978
YP_734536.1	CDS	rrmA	NC_008321.1	2870642	2871457	R	methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A	complement(2870642..2871457)	Shewanella sp. MR-4	4252979
YP_734537.1	CDS	Shewmr4_2409	NC_008321.1	2871490	2872296	R	KEGG: son:SO2789 hypothetical protein; hypothetical protein	complement(2871490..2872296)	Shewanella sp. MR-4	4252980
YP_734538.1	CDS	sbcB	NC_008321.1	2872472	2873884	D	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I	2872472..2873884	Shewanella sp. MR-4	4252981
YP_734539.1	CDS	Shewmr4_2411	NC_008321.1	2874092	2874982	D	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase	2874092..2874982	Shewanella sp. MR-4	4252982
YP_734540.1	CDS	Shewmr4_2412	NC_008321.1	2875079	2875285	R	PFAM: protein of unknown function DUF1289; KEGG: son:SO2792 hypothetical protein; hypothetical protein	complement(2875079..2875285)	Shewanella sp. MR-4	4252983
YP_734541.1	CDS	Shewmr4_2413	NC_008321.1	2875266	2875613	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO2793 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	complement(2875266..2875613)	Shewanella sp. MR-4	4252984
YP_734542.1	CDS	Shewmr4_2414	NC_008321.1	2875689	2876393	R	KEGG: son:SO2794 hypothetical protein; hypothetical protein	complement(2875689..2876393)	Shewanella sp. MR-4	4252985
YP_734543.1	CDS	Shewmr4_2415	NC_008321.1	2876740	2877120	D	KEGG: son:SO2795 glyoxalase family protein; glyoxalase family protein	2876740..2877120	Shewanella sp. MR-4	4252986
YP_734544.1	CDS	Shewmr4_2416	NC_008321.1	2877384	2880602	D	PFAM: protein of unknown function DUF748; KEGG: son:SO2796 hypothetical protein; hypothetical protein	2877384..2880602	Shewanella sp. MR-4	4252987
YP_734545.1	CDS	Shewmr4_2417	NC_008321.1	2880829	2881185	D	PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO2797 hypothetical protein; glutaredoxin	2880829..2881185	Shewanella sp. MR-4	4252988
YP_734546.1	CDS	Shewmr4_2418	NC_008321.1	2881243	2881932	R	KEGG: son:SO2798 hypothetical protein; hypothetical protein	complement(2881243..2881932)	Shewanella sp. MR-4	4252989
YP_734547.1	CDS	Shewmr4_2419	NC_008321.1	2882096	2882560	D	KEGG: son:SO2799 lipoprotein, putative; putative lipoprotein	2882096..2882560	Shewanella sp. MR-4	4252990
YP_734548.1	CDS	Shewmr4_2420	NC_008321.1	2882694	2882873	R	PFAM: protein of unknown function DUF343; KEGG: son:SO2800 hypothetical protein; hypothetical protein	complement(2882694..2882873)	Shewanella sp. MR-4	4252991
YP_734549.1	CDS	lpxK	NC_008321.1	2882863	2883870	R	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase	complement(2882863..2883870)	Shewanella sp. MR-4	4252992
YP_734550.1	CDS	Shewmr4_2422	NC_008321.1	2883871	2885676	R	KEGG: son:SO2802 ABC transporter, ATP-binding protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA	complement(2883871..2885676)	Shewanella sp. MR-4	4252993
YP_734551.1	CDS	Shewmr4_2423	NC_008321.1	2885709	2888030	R	TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: son:SO2803 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2	complement(2885709..2888030)	Shewanella sp. MR-4	4252994
YP_734552.1	CDS	Shewmr4_2424	NC_008321.1	2888063	2888572	D	KEGG: son:SO2804 hypothetical protein; hypothetical protein	2888063..2888572	Shewanella sp. MR-4	4252995
YP_734553.1	CDS	Shewmr4_2425	NC_008321.1	2888965	2890137	D	PFAM: NnrS family protein; KEGG: son:SO2805 putative uncharacterized protein involved in response to NO; NnrS family protein	2888965..2890137	Shewanella sp. MR-4	4252996
YP_734554.1	CDS	Shewmr4_2426	NC_008321.1	2890287	2890691	D	PFAM: phosphate-starvation-inducible E; KEGG: son:SO2806 hypothetical protein; phosphate-starvation-inducible E	2890287..2890691	Shewanella sp. MR-4	4252997
YP_734555.1	CDS	Shewmr4_2427	NC_008321.1	2890843	2891145	D	PFAM: type IV pilus assembly PilZ; KEGG: son:SO2807 hypothetical protein; type IV pilus assembly PilZ	2890843..2891145	Shewanella sp. MR-4	4252998
YP_734556.1	CDS	Shewmr4_2428	NC_008321.1	2891223	2891891	D	KEGG: son:SO2808 hypothetical protein; hypothetical protein	2891223..2891891	Shewanella sp. MR-4	4252999
YP_734557.1	CDS	Shewmr4_2429	NC_008321.1	2891878	2892222	D	KEGG: son:SO2809 RepA domain protein; RepA domain-containing protein	2891878..2892222	Shewanella sp. MR-4	4253000
YP_734558.1	CDS	Shewmr4_2430	NC_008321.1	2892434	2892682	R	KEGG: son:SO2821 hypothetical protein; hypothetical protein	complement(2892434..2892682)	Shewanella sp. MR-4	4253001
YP_734559.1	CDS	Shewmr4_2431	NC_008321.1	2892811	2894493	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: son:SO2822 sensor histidine kinase; signal transduction histidine kinase, LytS	2892811..2894493	Shewanella sp. MR-4	4253002
YP_734560.1	CDS	Shewmr4_2432	NC_008321.1	2894490	2895200	D	unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT	2894490..2895200	Shewanella sp. MR-4	4253003
YP_734561.1	CDS	Shewmr4_2433	NC_008321.1	2895396	2896844	D	PFAM: carbon starvation protein CstA; KEGG: son:SO2823.1 hypothetical carbon starvation protein A; carbon starvation protein CstA	2895396..2896844	Shewanella sp. MR-4	4253004
YP_734562.1	CDS	Shewmr4_2434	NC_008321.1	2896982	2897344	D	KEGG: son:SO2827 hypothetical protein; hypothetical protein	2896982..2897344	Shewanella sp. MR-4	4253005
YP_734563.1	CDS	Shewmr4_2435	NC_008321.1	2897742	2898851	R	KEGG: pha:PSHAa2586 L-sorbosone dehydrogenase (SNDH); L-sorbosone dehydrogenase (SNDH)	complement(2897742..2898851)	Shewanella sp. MR-4	4253006
YP_734564.1	CDS	Shewmr4_2436	NC_008321.1	2899017	2899475	D	KEGG: son:SO2829 hypothetical protein; hypothetical protein	2899017..2899475	Shewanella sp. MR-4	4253007
YP_734565.1	CDS	Shewmr4_2437	NC_008321.1	2899541	2900419	R	KEGG: son:SO2830 hypothetical protein; hypothetical protein	complement(2899541..2900419)	Shewanella sp. MR-4	4253008
YP_734566.1	CDS	ribA	NC_008321.1	2900534	2901145	R	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II	complement(2900534..2901145)	Shewanella sp. MR-4	4253009
YP_734567.1	CDS	Shewmr4_2439	NC_008321.1	2901409	2901765	R	KEGG: son:SO2832 hypothetical protein; hypothetical protein	complement(2901409..2901765)	Shewanella sp. MR-4	4253010
YP_734568.1	CDS	nrdG	NC_008321.1	2901891	2902352	R	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein	complement(2901891..2902352)	Shewanella sp. MR-4	4253011
YP_734569.1	CDS	Shewmr4_2441	NC_008321.1	2902458	2904575	R	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase	complement(2902458..2904575)	Shewanella sp. MR-4	4253012
YP_734570.1	CDS	Shewmr4_2442	NC_008321.1	2904903	2905622	R	KEGG: son:SO2835 hypothetical protein; hypothetical protein	complement(2904903..2905622)	Shewanella sp. MR-4	4253013
YP_734571.1	CDS	Shewmr4_2443	NC_008321.1	2905708	2906655	R	PFAM: Patatin; KEGG: son:SO2836 hypothetical protein; patatin	complement(2905708..2906655)	Shewanella sp. MR-4	4253014
YP_734572.1	CDS	Shewmr4_2444	NC_008321.1	2906983	2908332	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO2838 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	2906983..2908332	Shewanella sp. MR-4	4253015
YP_734573.1	CDS	Shewmr4_2445	NC_008321.1	2908431	2908868	D	KEGG: son:SO2839 hypothetical protein; hypothetical protein	2908431..2908868	Shewanella sp. MR-4	4253016
YP_734574.1	CDS	Shewmr4_2446	NC_008321.1	2908925	2909434	D	PFAM: protein of unknown function DUF45; KEGG: son:SO2840 hypothetical protein; hypothetical protein	2908925..2909434	Shewanella sp. MR-4	4253017
YP_734575.1	CDS	Shewmr4_2447	NC_008321.1	2909560	2910018	D	KEGG: son:SO2841 hypothetical protein; hypothetical protein	2909560..2910018	Shewanella sp. MR-4	4253018
YP_734576.1	CDS	Shewmr4_2448	NC_008321.1	2910369	2911664	R	PFAM: peptidase M23B; Opacity-associated protein A; KEGG: son:SO2842 peptidase, M23/M37 family; peptidase M23B	complement(2910369..2911664)	Shewanella sp. MR-4	4253019
YP_734577.1	CDS	Shewmr4_2449	NC_008321.1	2911937	2914993	R	PFAM: SMC domain protein; KEGG: son:SO2843 exonuclease SbcC, putative; SMC domain-containing protein	complement(2911937..2914993)	Shewanella sp. MR-4	4253020
YP_734578.1	CDS	Shewmr4_2450	NC_008321.1	2914990	2916192	R	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: son:SO2844 exonuclease SbcD, putative; exodeoxyribonuclease I subunit D	complement(2914990..2916192)	Shewanella sp. MR-4	4253021
YP_734579.1	CDS	Shewmr4_2451	NC_008321.1	2916474	2917283	R	PFAM: protein of unknown function DUF81; KEGG: son:SO2846 hypothetical protein; hypothetical protein	complement(2916474..2917283)	Shewanella sp. MR-4	4253022
YP_734580.1	CDS	Shewmr4_2452	NC_008321.1	2917332	2918294	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2847 transcriptional regulator, LysR family; LysR family transcriptional regulator	2917332..2918294	Shewanella sp. MR-4	4253023
YP_734581.1	CDS	Shewmr4_2453	NC_008321.1	2918348	2918734	R	PFAM: protein of unknown function DUF1260; KEGG: son:SO1836 hypothetical protein; hypothetical protein	complement(2918348..2918734)	Shewanella sp. MR-4	4253024
YP_734582.1	CDS	Shewmr4_2454	NC_008321.1	2918757	2918987	R	PFAM: RNA-binding S4 domain protein; KEGG: sdn:Sden_2510 RNA-binding S4; RNA-binding S4 domain-containing protein	complement(2918757..2918987)	Shewanella sp. MR-4	4253025
YP_734583.1	CDS	Shewmr4_2455	NC_008321.1	2919058	2919594	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1834 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(2919058..2919594)	Shewanella sp. MR-4	4253026
YP_734584.1	CDS	Shewmr4_2456	NC_008321.1	2919669	2919947	R	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO1832 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase	complement(2919669..2919947)	Shewanella sp. MR-4	4253027
YP_734585.1	CDS	Shewmr4_2457	NC_008321.1	2920127	2921956	R	PFAM: protein of unknown function DUF885; KEGG: son:SO1831 hypothetical protein; hypothetical protein	complement(2920127..2921956)	Shewanella sp. MR-4	4253028
YP_734586.1	CDS	Shewmr4_2458	NC_008321.1	2922037	2922546	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1830 GGDEF domain protein; diguanylate cyclase	2922037..2922546	Shewanella sp. MR-4	4253029
YP_734587.1	CDS	Shewmr4_2459	NC_008321.1	2922598	2923845	R	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO1829 TPR domain protein; TPR repeat-containing protein	complement(2922598..2923845)	Shewanella sp. MR-4	4253030
YP_734588.1	CDS	Shewmr4_2460	NC_008321.1	2923848	2924471	R	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: son:SO1828 TonB2 protein; TonB family protein	complement(2923848..2924471)	Shewanella sp. MR-4	4253031
YP_734589.1	CDS	Shewmr4_2461	NC_008321.1	2924473	2924877	R	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO1827 TonB system transport protein ExbD2; biopolymer transport protein ExbD/TolR	complement(2924473..2924877)	Shewanella sp. MR-4	4253032
YP_734590.1	CDS	Shewmr4_2462	NC_008321.1	2924891	2925418	R	PFAM: MotA/TolQ/ExbB proton channel; KEGG: sdn:Sden_2423 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel	complement(2924891..2925418)	Shewanella sp. MR-4	4253033
YP_734591.1	CDS	Shewmr4_2463	NC_008321.1	2925418	2926773	R	PFAM: MotA/TolQ/ExbB proton channel; KEGG: son:SO1825 MotA/TolQ/ExbB proton channel family protein; MotA/TolQ/ExbB proton channel	complement(2925418..2926773)	Shewanella sp. MR-4	4253034
YP_734592.1	CDS	Shewmr4_2464	NC_008321.1	2926773	2927555	R	KEGG: sdn:Sden_2425 hypothetical protein; hypothetical protein	complement(2926773..2927555)	Shewanella sp. MR-4	4253035
YP_734593.1	CDS	Shewmr4_2465	NC_008321.1	2928335	2929549	R	PFAM: transposase, IS4 family protein; KEGG: son:SO4437 ISSod3, transposase; IS4 family transposase	complement(2928335..2929549)	Shewanella sp. MR-4	4253036
YP_734594.1	CDS	Shewmr4_2466	NC_008321.1	2930747	2931181	R	PFAM: transposase IS200-family protein; KEGG: vch:VCA0275 IS1004 transposase; transposase IS200-family protein	complement(2930747..2931181)	Shewanella sp. MR-4	4253037
YP_734595.1	CDS	Shewmr4_2467	NC_008321.1	2931349	2934072	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cps:CPS_3757 TonB-dependent receptor; TonB-dependent receptor	complement(2931349..2934072)	Shewanella sp. MR-4	4253038
YP_734596.1	CDS	Shewmr4_2468	NC_008321.1	2934350	2935558	R	PFAM: porin, Gram-negative type; KEGG: son:SO1821 outer membrane porin, putative; porin	complement(2934350..2935558)	Shewanella sp. MR-4	4253039
YP_734597.1	CDS	Shewmr4_2469	NC_008321.1	2935779	2938211	R	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II	complement(2935779..2938211)	Shewanella sp. MR-4	4253040
YP_734598.1	CDS	dinG	NC_008321.1	2938352	2940424	D	helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG	2938352..2940424	Shewanella sp. MR-4	4253041
YP_734599.1	CDS	Shewmr4_2471	NC_008321.1	2940434	2941207	D	PFAM: protein of unknown function DUF81; KEGG: son:SO1818 hypothetical protein; hypothetical protein	2940434..2941207	Shewanella sp. MR-4	4253042
YP_734600.1	CDS	Shewmr4_2472	NC_008321.1	2941198	2941866	D	KEGG: son:SO1817 primosomal replication protein N'', putative; primosomal replication protein N''	2941198..2941866	Shewanella sp. MR-4	4253043
YP_734601.1	CDS	Shewmr4_2473	NC_008321.1	2941876	2942568	D	KEGG: son:SO1816 hypothetical protein; hypothetical protein	2941876..2942568	Shewanella sp. MR-4	4253044
YP_734602.1	CDS	Shewmr4_2474	NC_008321.1	2942574	2943476	D	PFAM: histone deacetylase superfamily; KEGG: son:SO1815 histone deacetylase/AcuC/AphA family protein; histone deacetylase superfamily protein	2942574..2943476	Shewanella sp. MR-4	4253045
YP_734603.1	CDS	Shewmr4_2475	NC_008321.1	2943510	2943797	D	KEGG: son:SO1814 hypothetical protein; hypothetical protein	2943510..2943797	Shewanella sp. MR-4	4253046
YP_734604.1	CDS	Shewmr4_2476	NC_008321.1	2944262	2944627	R	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: son:SO1813 DNA-binding protein, putative; helix-hairpin-helix repeat-containing competence protein ComEA	complement(2944262..2944627)	Shewanella sp. MR-4	4253047
YP_734605.1	CDS	Shewmr4_2477	NC_008321.1	2944868	2946061	R	KEGG: son:SO1812 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; methionine gamma-lyase	complement(2944868..2946061)	Shewanella sp. MR-4	4253048
YP_734606.1	CDS	Shewmr4_2478	NC_008321.1	2946380	2947582	R	PFAM: conserved hypothetical protein 1620; KEGG: son:SO1811 hypothetical protein; hypothetical protein	complement(2946380..2947582)	Shewanella sp. MR-4	4253049
YP_734607.1	CDS	Shewmr4_2479	NC_008321.1	2947579	2949039	R	PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: son:SO1810 hypothetical ATPase; hypothetical protein	complement(2947579..2949039)	Shewanella sp. MR-4	4253050
YP_734608.1	CDS	Shewmr4_2480	NC_008321.1	2949134	2949520	R	PFAM: PspC domain protein; KEGG: son:SO1809 phage shock protein C; phage shock protein C, PspC	complement(2949134..2949520)	Shewanella sp. MR-4	4253051
YP_734609.1	CDS	pspB	NC_008321.1	2949507	2949740	R	acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B	complement(2949507..2949740)	Shewanella sp. MR-4	4253052
YP_734610.1	CDS	Shewmr4_2482	NC_008321.1	2949765	2950448	R	PFAM: PspA/IM30 family protein; KEGG: son:SO1807 phage shock protein A; phage shock protein A, PspA	complement(2949765..2950448)	Shewanella sp. MR-4	4253053
YP_734611.1	CDS	Shewmr4_2483	NC_008321.1	2950626	2951714	D	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO1806 psp operon transcriptional activator; Fis family transcriptional regulator	2950626..2951714	Shewanella sp. MR-4	4253054
YP_734612.1	CDS	Shewmr4_2484	NC_008321.1	2951784	2953409	D	PFAM: extracellular solute-binding protein, family 5; KEGG: son:SO1805 peptide ABC transporter, periplasmic peptide-binding protein; extracellular solute-binding protein	2951784..2953409	Shewanella sp. MR-4	4253055
YP_734613.1	CDS	Shewmr4_2485	NC_008321.1	2953409	2954440	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1804 peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component	2953409..2954440	Shewanella sp. MR-4	4253056
YP_734614.1	CDS	Shewmr4_2486	NC_008321.1	2954427	2955317	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1803 peptide ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component	2954427..2955317	Shewanella sp. MR-4	4253057
YP_734615.1	CDS	Shewmr4_2487	NC_008321.1	2955321	2956328	D	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; KEGG: son:SO1802 peptide ABC transporter, ATP-binding protein; oligopeptide/dipeptide ABC transporter ATPase subunit	2955321..2956328	Shewanella sp. MR-4	4253058
YP_734616.1	CDS	Shewmr4_2488	NC_008321.1	2956309	2957094	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1801 peptide ABC transporter, ATP-binding protein; ABC transporter-like protein	2956309..2957094	Shewanella sp. MR-4	4253059
YP_734617.2	CDS	Shewmr4_2489	NC_008321.1	2957200	2958402	D	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase	2957200..2958402	Shewanella sp. MR-4	4253060
YP_734618.1	CDS	Shewmr4_2490	NC_008321.1	2958518	2958730	D	TIGRFAM: Molybdenum-pterin binding; PFAM: TOBE domain protein; KEGG: mma:MM0224 molybdenum-pterin-binding-protein; molybdenum-pterin binding	2958518..2958730	Shewanella sp. MR-4	4253061
YP_734619.1	CDS	Shewmr4_2491	NC_008321.1	2958879	2960744	R	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO1798 peptidyl-prolyl cis-trans isomerase D; PpiC-type peptidyl-prolyl cis-trans isomerase	complement(2958879..2960744)	Shewanella sp. MR-4	4253062
YP_734620.1	CDS	Shewmr4_2492	NC_008321.1	2960971	2961243	R	PFAM: histone family protein DNA-binding protein; KEGG: son:SO1797 DNA-binding protein, HU family; histone family protein DNA-binding protein	complement(2960971..2961243)	Shewanella sp. MR-4	4253063
YP_734621.1	CDS	Shewmr4_2493	NC_008321.1	2961503	2963860	R	KEGG: son:SO1796 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Lon-A peptidase	complement(2961503..2963860)	Shewanella sp. MR-4	4253064
YP_734622.1	CDS	clpX	NC_008321.1	2963993	2965273	R	binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX	complement(2963993..2965273)	Shewanella sp. MR-4	4253065
YP_734623.1	CDS	clpP	NC_008321.1	2965373	2965981	R	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit	complement(2965373..2965981)	Shewanella sp. MR-4	4253066
YP_734624.1	CDS	tig	NC_008321.1	2966071	2967375	R	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor	complement(2966071..2967375)	Shewanella sp. MR-4	4253067
YP_734625.1	CDS	Shewmr4_2497	NC_008321.1	2968253	2969107	D	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase	2968253..2969107	Shewanella sp. MR-4	4253068
YP_734626.1	CDS	cysS	NC_008321.1	2969331	2970716	R	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase	complement(2969331..2970716)	Shewanella sp. MR-4	4253069
YP_734627.1	CDS	Shewmr4_2499	NC_008321.1	2970851	2971342	D	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO1790 peptidyl-prolyl cis-trans isomerase B; peptidyl-prolyl cis-trans isomerase, cyclophilin type	2970851..2971342	Shewanella sp. MR-4	4253070
YP_734628.1	CDS	Shewmr4_2500	NC_008321.1	2971352	2972071	D	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase	2971352..2972071	Shewanella sp. MR-4	4253071
YP_734629.1	CDS	Shewmr4_2501	NC_008321.1	2972159	2972929	R	PFAM: tRNA--hydroxylase; KEGG: son:SO1788 tRNA hydroxylase; tRNA--hydroxylase	complement(2972159..2972929)	Shewanella sp. MR-4	4253072
YP_734630.1	CDS	Shewmr4_2502	NC_008321.1	2973210	2973806	D	PFAM: protein of unknown function DUF1282; KEGG: son:SO1787 hypothetical protein; hypothetical protein	2973210..2973806	Shewanella sp. MR-4	4253073
YP_734631.1	CDS	Shewmr4_2503	NC_008321.1	2973999	2975669	R	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase	complement(2973999..2975669)	Shewanella sp. MR-4	4253074
YP_734632.1	CDS	Shewmr4_2504	NC_008321.1	2975853	2978147	R	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: son:SO1784 ferrous iron transport protein B; ferrous iron transport protein B	complement(2975853..2978147)	Shewanella sp. MR-4	4253075
YP_734633.1	CDS	Shewmr4_2505	NC_008321.1	2978140	2978379	R	PFAM: FeoA family protein; KEGG: son:SO1783 ferrous iron transport protein A; FeoA family protein	complement(2978140..2978379)	Shewanella sp. MR-4	4253076
YP_734634.1	CDS	Shewmr4_2506	NC_008321.1	2978806	2979771	D	TIGRFAM: cytochrome C family protein; KEGG: son:SO1782 decaheme cytochrome c MtrD; cytochrome C family protein	2978806..2979771	Shewanella sp. MR-4	4253077
YP_734635.1	CDS	Shewmr4_2507	NC_008321.1	2979785	2981923	D	KEGG: son:SO1781 outer membrane protein, putative; outer membrane protein	2979785..2981923	Shewanella sp. MR-4	4253078
YP_734636.1	CDS	Shewmr4_2508	NC_008321.1	2981959	2983878	D	KEGG: son:SO1780 decaheme cytochrome c MtrF; decaheme cytochrome c MtrF	2981959..2983878	Shewanella sp. MR-4	4253079
YP_734637.1	CDS	Shewmr4_2509	NC_008321.1	2984125	2986320	D	KEGG: son:SO1779 decaheme cytochrome c; decaheme cytochrome c	2984125..2986320	Shewanella sp. MR-4	4253080
YP_734638.1	CDS	Shewmr4_2510	NC_008321.1	2986653	2988620	D	KEGG: son:SO1778 decaheme cytochrome c; decaheme cytochrome c	2986653..2988620	Shewanella sp. MR-4	4253081
YP_734639.1	CDS	Shewmr4_2511	NC_008321.1	2988689	2989678	D	TIGRFAM: cytochrome C family protein; KEGG: son:SO1777 decaheme cytochrome c MtrA; cytochrome C family protein	2988689..2989678	Shewanella sp. MR-4	4253082
YP_734640.1	CDS	Shewmr4_2512	NC_008321.1	2989691	2991778	D	KEGG: son:SO1776 outer membrane protein precursor MtrB; outer membrane protein precursor MtrB	2989691..2991778	Shewanella sp. MR-4	4253083
YP_734641.1	CDS	Shewmr4_2513	NC_008321.1	2991998	2992621	D	hypothetical protein	2991998..2992621	Shewanella sp. MR-4	4253084
YP_734642.1	CDS	Shewmr4_2514	NC_008321.1	2992621	2993343	D	KEGG: son:SO1775 phage SPO1 DNA polymerase domain protein; phage SPO1 DNA polymerase domain-containing protein	2992621..2993343	Shewanella sp. MR-4	4253085
YP_734643.1	CDS	Shewmr4_2515	NC_008321.1	2993472	2994974	R	PFAM: peptidase M4, thermolysin; Propeptide, PepSY amd peptidase M4; KEGG: pae:PA3724 elastase LasB; vibriolysin	complement(2993472..2994974)	Shewanella sp. MR-4	4253086
YP_734644.1	CDS	Shewmr4_2516	NC_008321.1	2995206	2996438	D	PFAM: sugar diacid recognition domain protein; KEGG: son:SO1774 hypothetical sugar diacid utilization regulator; CdaR family transcriptional regulator	2995206..2996438	Shewanella sp. MR-4	4253087
YP_734645.1	CDS	Shewmr4_2517	NC_008321.1	2996676	2997674	D	PFAM: Catalase domain protein; KEGG: son:SO1771.2 hypothetical catalase; catalase domain-containing protein	2996676..2997674	Shewanella sp. MR-4	4253088
YP_734646.1	CDS	Shewmr4_2518	NC_008321.1	2997941	2999299	D	PFAM: Gluconate transporter; Citrate transporter; KEGG: son:SO1771 permease, GntP family; gluconate transporter	2997941..2999299	Shewanella sp. MR-4	4253089
YP_734647.1	CDS	Shewmr4_2519	NC_008321.1	2999358	3000503	D	KEGG: son:SO1770 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase; glycerate kinase	2999358..3000503	Shewanella sp. MR-4	4253090
YP_734648.1	CDS	Shewmr4_2520	NC_008321.1	3000758	3002407	D	PFAM: Pyridoxal-dependent decarboxylase; KEGG: son:SO1769 glutamate decarboxylase, putative; pyridoxal-dependent decarboxylase	3000758..3002407	Shewanella sp. MR-4	4253091
YP_734649.1	CDS	Shewmr4_2521	NC_008321.1	3002870	3005479	R	KEGG: bbr:BB0911 putative serine protease; hypothetical protein	complement(3002870..3005479)	Shewanella sp. MR-4	4253092
YP_734650.1	CDS	Shewmr4_2522	NC_008321.1	3005493	3006467	R	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: bbr:BB0910 putative ATPase; ATPase central domain-containing protein	complement(3005493..3006467)	Shewanella sp. MR-4	4253093
YP_734651.1	CDS	Shewmr4_2523	NC_008321.1	3006838	3007302	D	KEGG: sdn:Sden_0571 hypothetical protein; hypothetical protein	3006838..3007302	Shewanella sp. MR-4	4253094
YP_734652.1	CDS	Shewmr4_2524	NC_008321.1	3007382	3007837	D	hypothetical protein	3007382..3007837	Shewanella sp. MR-4	4253095
YP_734653.1	CDS	Shewmr4_2525	NC_008321.1	3007937	3008317	D	hypothetical protein	3007937..3008317	Shewanella sp. MR-4	4253096
YP_734654.1	CDS	Shewmr4_2526	NC_008321.1	3008528	3009031	D	KEGG: son:SO1763 streptogramin A acetyl transferase; streptogramin A acetyl transferase	3008528..3009031	Shewanella sp. MR-4	4253097
YP_734655.1	CDS	Shewmr4_2527	NC_008321.1	3009201	3010037	D	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO1762 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator	3009201..3010037	Shewanella sp. MR-4	4253098
YP_734656.1	CDS	Shewmr4_2528	NC_008321.1	3010103	3010870	D	PFAM: AzlC family protein; KEGG: son:SO1760 AzlC family protein; AzlC family protein	3010103..3010870	Shewanella sp. MR-4	4253099
YP_734657.1	CDS	Shewmr4_2529	NC_008321.1	3010867	3011169	D	PFAM: branched-chain amino acid transport; KEGG: son:SO1759 hypothetical protein; branched-chain amino acid transport	3010867..3011169	Shewanella sp. MR-4	4253100
YP_734658.1	CDS	Shewmr4_2530	NC_008321.1	3011159	3012517	R	PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_3038 multiple antibiotic resistance (MarC)-related proteins; major facilitator transporter	complement(3011159..3012517)	Shewanella sp. MR-4	4253101
YP_734659.1	CDS	Shewmr4_2531	NC_008321.1	3012639	3013808	R	KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine 6-phosphate deacetylase	complement(3012639..3013808)	Shewanella sp. MR-4	4253102
YP_734660.1	CDS	Shewmr4_2532	NC_008321.1	3013798	3014724	R	PFAM: ROK family protein; KEGG: yps:YPTB2439 hypothetical protein; N-acetylglucosamine kinase	complement(3013798..3014724)	Shewanella sp. MR-4	4253103
YP_734661.1	CDS	Shewmr4_2533	NC_008321.1	3014745	3015905	R	PFAM: sugar isomerase (SIS); KEGG: vvy:VVA1515 predicted phosphosugar isomerase; sugar isomerase (SIS)	complement(3014745..3015905)	Shewanella sp. MR-4	4253104
YP_734662.1	CDS	Shewmr4_2534	NC_008321.1	3015913	3017199	R	PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: ecj:JW3101 tagatose 6-phosphate aldolase 1, kbaZ subunit; tagatose-bisphosphate aldolase noncatalytic subunit	complement(3015913..3017199)	Shewanella sp. MR-4	4253105
YP_734663.1	CDS	Shewmr4_2535	NC_008321.1	3017205	3018575	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase domain protein; KEGG: son:SO3120 oxidoreductase, Gfo/Idh/MocA family; twin-arginine translocation pathway signal	complement(3017205..3018575)	Shewanella sp. MR-4	4253106
YP_734664.1	CDS	Shewmr4_2536	NC_008321.1	3018588	3019373	R	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ppr:PBPRB0140 putative DeoR-family regulatory protein; DeoR family transcriptional regulator	complement(3018588..3019373)	Shewanella sp. MR-4	4253107
YP_734665.1	CDS	Shewmr4_2537	NC_008321.1	3019708	3022563	D	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cps:CPS_0238 TonB-dependent receptor; TonB-dependent receptor	3019708..3022563	Shewanella sp. MR-4	4253108
YP_734666.1	CDS	Shewmr4_2538	NC_008321.1	3022611	3023309	R	PFAM: Helix-turn-helix, type 11 domain protein; KEGG: son:SO1758 hypothetical protein; helix-turn-helix, type 11 domain-containing protein	complement(3022611..3023309)	Shewanella sp. MR-4	4253109
YP_734667.1	CDS	Shewmr4_2539	NC_008321.1	3023420	3023869	R	PFAM: transcription activator, effector binding; KEGG: son:SO1757 hypothetical protein; transcription activator, effector binding	complement(3023420..3023869)	Shewanella sp. MR-4	4253110
YP_734668.1	CDS	Shewmr4_2540	NC_008321.1	3024039	3024422	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO1756 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	complement(3024039..3024422)	Shewanella sp. MR-4	4253111
YP_734669.1	CDS	Shewmr4_2541	NC_008321.1	3024576	3026297	R	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: son:SO1755 phosphoglucomutase/phosphomannomutase family protein; phosphoglucomutase/phosphomannomutase alpha/beta/subunit	complement(3024576..3026297)	Shewanella sp. MR-4	4253112
YP_734670.1	CDS	Shewmr4_2542	NC_008321.1	3026560	3026865	R	KEGG: son:SO1753 hypothetical protein; hypothetical protein	complement(3026560..3026865)	Shewanella sp. MR-4	4253113
YP_734671.1	CDS	Shewmr4_2543	NC_008321.1	3027304	3028287	R	PFAM: Integral membrane protein TerC; KEGG: son:SO1747 membrane protein, putative; integral membrane protein TerC	complement(3027304..3028287)	Shewanella sp. MR-4	4253114
YP_734672.1	CDS	Shewmr4_2544	NC_008321.1	3028758	3028997	R	KEGG: son:SO1746 hypothetical protein; hypothetical protein	complement(3028758..3028997)	Shewanella sp. MR-4	4253115
YP_734673.1	CDS	Shewmr4_2545	NC_008321.1	3029074	3030201	R	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO1745 3-beta hydroxysteroid dehydrogenase/isomerase family protein; 3-beta hydroxysteroid dehydrogenase/isomerase	complement(3029074..3030201)	Shewanella sp. MR-4	4253116
YP_734674.1	CDS	Shewmr4_2546	NC_008321.1	3030345	3032186	R	Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase	complement(3030345..3032186)	Shewanella sp. MR-4	4253117
YP_734675.1	CDS	Shewmr4_2547	NC_008321.1	3032186	3033205	R	PFAM: alpha/beta hydrolase fold; KEGG: son:SO1743 hydrolase, alpha/beta hydrolase fold family; alpha/beta hydrolase fold domain-containing protein	complement(3032186..3033205)	Shewanella sp. MR-4	4253118
YP_734676.1	CDS	Shewmr4_2548	NC_008321.1	3033307	3034356	R	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III	complement(3033307..3034356)	Shewanella sp. MR-4	4253119
YP_734677.1	CDS	Shewmr4_2549	NC_008321.1	3034611	3035978	R	KEGG: son:SO1741 hypothetical protein; hypothetical protein	complement(3034611..3035978)	Shewanella sp. MR-4	4253120
YP_734678.1	CDS	Shewmr4_2550	NC_008321.1	3036266	3036499	D	PFAM: protein of unknown function DUF1289; KEGG: son:SO1739 hypothetical protein; hypothetical protein	3036266..3036499	Shewanella sp. MR-4	4253121
YP_734679.1	CDS	Shewmr4_2551	NC_008321.1	3036526	3036888	R	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: son:SO1738 hypothetical protein; hypothetical protein	complement(3036526..3036888)	Shewanella sp. MR-4	4253122
YP_734680.1	CDS	Shewmr4_2552	NC_008321.1	3036976	3038952	R	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: sdn:Sden_1362 choline/carnitine/betaine transport; choline/carnitine/betaine transporter	complement(3036976..3038952)	Shewanella sp. MR-4	4253123
YP_734681.1	CDS	Shewmr4_2553	NC_008321.1	3039635	3040240	R	KEGG: son:SO1736 hypothetical protein; hypothetical protein	complement(3039635..3040240)	Shewanella sp. MR-4	4253124
YP_734682.1	CDS	Shewmr4_2554	NC_008321.1	3040396	3040791	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO1734 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	3040396..3040791	Shewanella sp. MR-4	4253125
YP_734683.1	CDS	Shewmr4_2555	NC_008321.1	3040916	3041893	D	PFAM: protein of unknown function DUF1568; KEGG: son:SO1546 hypothetical protein; hypothetical protein	3040916..3041893	Shewanella sp. MR-4	4253126
YP_734684.1	CDS	Shewmr4_2556	NC_008321.1	3042633	3043715	R	KEGG: son:SO4661 hypothetical protein; hypothetical protein	complement(3042633..3043715)	Shewanella sp. MR-4	4253127
YP_734685.1	CDS	Shewmr4_2557	NC_008321.1	3044033	3044743	R	regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU	complement(3044033..3044743)	Shewanella sp. MR-4	4253128
YP_734686.1	CDS	Shewmr4_2558	NC_008321.1	3044871	3045689	R	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein	complement(3044871..3045689)	Shewanella sp. MR-4	4253129
YP_734687.1	CDS	Shewmr4_2559	NC_008321.1	3045723	3047381	R	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1724 phosphate ABC transporter, permease protein, putative; phosphate ABC transporter inner membrane subunit PstA	complement(3045723..3047381)	Shewanella sp. MR-4	4253130
YP_734688.1	CDS	Shewmr4_2560	NC_008321.1	3047441	3049699	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1723 phosphate ABC transporter, permease protein, putative; binding-protein-dependent transport systems inner membrane component	complement(3047441..3049699)	Shewanella sp. MR-4	4253131
YP_734689.1	CDS	Shewmr4_2561	NC_008321.1	3049899	3050399	D	PFAM: amino acid-binding ACT domain protein; KEGG: son:SO1722 ACT domain protein; ACT domain-containing protein	3049899..3050399	Shewanella sp. MR-4	4253132
YP_734690.1	CDS	Shewmr4_2562	NC_008321.1	3050460	3051368	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: sdn:Sden_1682 protein of unknown function DUF6, transmembrane; hypothetical protein	complement(3050460..3051368)	Shewanella sp. MR-4	4253133
YP_734691.1	CDS	Shewmr4_2563	NC_008321.1	3051494	3052567	R	PFAM: putative esterase; KEGG: ilo:IL2526 predicted hydrolase of the alpha/beta superfamily; putative esterase	complement(3051494..3052567)	Shewanella sp. MR-4	4253134
YP_734692.1	CDS	Shewmr4_2564	NC_008321.1	3052847	3053671	D	KEGG: son:SO1718 hypothetical protein; hypothetical protein	3052847..3053671	Shewanella sp. MR-4	4253135
YP_734693.1	CDS	Shewmr4_2565	NC_008321.1	3053896	3054294	R	KEGG: bbr:BB1298 hypothetical protein; hypothetical protein	complement(3053896..3054294)	Shewanella sp. MR-4	4253136
YP_734694.1	CDS	Shewmr4_2566	NC_008321.1	3054542	3055144	R	KEGG: son:SO1717 hypothetical protein; hypothetical protein	complement(3054542..3055144)	Shewanella sp. MR-4	4253137
YP_734695.1	CDS	Shewmr4_2567	NC_008321.1	3055453	3056046	D	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO1716 transporter, LysE family; lysine exporter protein LysE/YggA	3055453..3056046	Shewanella sp. MR-4	4253138
YP_734696.1	CDS	Shewmr4_2568	NC_008321.1	3056074	3056622	D	PFAM: protein of unknown function DUF1415; KEGG: son:SO1715 hypothetical protein; hypothetical protein	3056074..3056622	Shewanella sp. MR-4	4253139
YP_734697.1	CDS	Shewmr4_2569	NC_008321.1	3056760	3057182	R	KEGG: son:SO1710 hypothetical protein; hypothetical protein	complement(3056760..3057182)	Shewanella sp. MR-4	4253140
YP_734698.1	CDS	Shewmr4_2570	NC_008321.1	3057539	3059104	D	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: sdn:Sden_3290 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin	3057539..3059104	Shewanella sp. MR-4	4253141
YP_734699.1	CDS	Shewmr4_2571	NC_008321.1	3059183	3060013	R	hypothetical protein	complement(3059183..3060013)	Shewanella sp. MR-4	4253142
YP_734700.1	CDS	Shewmr4_2572	NC_008321.1	3060258	3061607	R	PFAM: acetyl-CoA hydrolase/transferase; KEGG: son:SO1708 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase	complement(3060258..3061607)	Shewanella sp. MR-4	4253143
YP_734701.1	CDS	Shewmr4_2573	NC_008321.1	3061783	3062904	R	PFAM: ABC-2 type transporter; KEGG: son:SO1707 ABC transporter, permease protein, putative; ABC-2 type transporter	complement(3061783..3062904)	Shewanella sp. MR-4	4253144
YP_734702.1	CDS	Shewmr4_2574	NC_008321.1	3062894	3063934	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRA2312 putative ABC-type multidrug transport system, ATPase component; ABC transporter-like protein	complement(3062894..3063934)	Shewanella sp. MR-4	4253145
YP_734703.1	CDS	Shewmr4_2575	NC_008321.1	3063931	3064944	R	PFAM: secretion protein HlyD family protein; KEGG: son:SO1705 putative HlyD family secretion protein; secretion protein HlyD family protein	complement(3063931..3064944)	Shewanella sp. MR-4	4253146
YP_734704.1	CDS	Shewmr4_2576	NC_008321.1	3064941	3065642	R	PFAM: regulatory protein, TetR; KEGG: ppr:PBPRA0420 putative transcriptional regulator; TetR family transcriptional regulator	complement(3064941..3065642)	Shewanella sp. MR-4	4253147
YP_734705.1	CDS	Shewmr4_2577	NC_008321.1	3065871	3066218	R	KEGG: son:SO1702 hypothetical protein; hypothetical protein	complement(3065871..3066218)	Shewanella sp. MR-4	4253148
YP_734706.1	CDS	Shewmr4_2578	NC_008321.1	3066717	3067574	D	KEGG: son:SO1701 hypothetical protein; hypothetical protein	3066717..3067574	Shewanella sp. MR-4	4253149
YP_734707.1	CDS	Shewmr4_2579	NC_008321.1	3067585	3068913	D	KEGG: son:SO1700 hypothetical protein; hypothetical protein	3067585..3068913	Shewanella sp. MR-4	4253150
YP_734708.1	CDS	Shewmr4_2580	NC_008321.1	3069303	3072494	D	PFAM: transcriptional regulator domain protein; KEGG: son:SO1699 transcriptional regulator; lysine decarboxylase transcriptional regulator, CadC	3069303..3072494	Shewanella sp. MR-4	4253151
YP_734709.1	CDS	Shewmr4_2581	NC_008321.1	3072545	3072922	D	KEGG: son:SO1698 hypothetical protein; hypothetical protein	3072545..3072922	Shewanella sp. MR-4	4253152
YP_734710.1	CDS	Shewmr4_2582	NC_008321.1	3073249	3074268	D	KEGG: son:SO1695 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; diguanylate cyclase	3073249..3074268	Shewanella sp. MR-4	4253153
YP_734711.1	CDS	Shewmr4_2583	NC_008321.1	3074328	3077018	D	PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: son:SO1694 FAD-binding protein; FAD linked oxidase domain-containing protein	3074328..3077018	Shewanella sp. MR-4	4253154
YP_734712.1	CDS	Shewmr4_2584	NC_008321.1	3077195	3078091	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1692 hypothetical protein; hypothetical protein	3077195..3078091	Shewanella sp. MR-4	4253155
YP_734713.1	CDS	Shewmr4_2585	NC_008321.1	3078160	3078690	D	PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: son:SO1691 lipoprotein Blc; Lipocalin family protein	3078160..3078690	Shewanella sp. MR-4	4253156
YP_734714.1	CDS	Shewmr4_2586	NC_008321.1	3078804	3080444	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1690 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(3078804..3080444)	Shewanella sp. MR-4	4253157
YP_734715.1	CDS	Shewmr4_2587	NC_008321.1	3080872	3083148	R	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: son:SO1689 cation transport ATPase, E1-E2 family; copper-translocating P-type ATPase	complement(3080872..3083148)	Shewanella sp. MR-4	4253158
YP_734716.1	CDS	Shewmr4_2588	NC_008321.1	3083297	3083686	D	PFAM: regulatory protein, MerR; KEGG: son:SO1687 transcriptional regulator, MerR family; MerR family transcriptional regulator	3083297..3083686	Shewanella sp. MR-4	4253159
YP_734717.1	CDS	Shewmr4_2589	NC_008321.1	3083745	3085778	R	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: son:SO1686 prolyl oligopeptidase family protein; peptidase S9 prolyl oligopeptidase	complement(3083745..3085778)	Shewanella sp. MR-4	4253160
YP_734718.1	CDS	Shewmr4_2590	NC_008321.1	3085836	3086078	R	KEGG: son:SO1685 hypothetical protein; hypothetical protein	complement(3085836..3086078)	Shewanella sp. MR-4	4253161
YP_734719.1	CDS	fabG	NC_008321.1	3086286	3087044	R	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase	complement(3086286..3087044)	Shewanella sp. MR-4	4253162
YP_734720.1	CDS	Shewmr4_2592	NC_008321.1	3087064	3087966	R	KEGG: son:SO1682 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase	complement(3087064..3087966)	Shewanella sp. MR-4	4253163
YP_734721.1	CDS	Shewmr4_2593	NC_008321.1	3088067	3089215	R	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO1681 enoyl-CoA hydratase/isomerase family protein; enoyl-CoA hydratase/isomerase	complement(3088067..3089215)	Shewanella sp. MR-4	4253164
YP_734722.1	CDS	Shewmr4_2594	NC_008321.1	3089215	3089988	R	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase	complement(3089215..3089988)	Shewanella sp. MR-4	4253165
YP_734723.1	CDS	Shewmr4_2595	NC_008321.1	3090053	3091210	R	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO1679 acyl-CoA dehydrogenase family protein; acyl-CoA dehydrogenase domain-containing protein	complement(3090053..3091210)	Shewanella sp. MR-4	4253166
YP_734724.1	CDS	Shewmr4_2596	NC_008321.1	3091375	3092874	R	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: son:SO1678 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase	complement(3091375..3092874)	Shewanella sp. MR-4	4253167
YP_734725.1	CDS	Shewmr4_2597	NC_008321.1	3093010	3094200	R	KEGG: son:SO1677 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferases	complement(3093010..3094200)	Shewanella sp. MR-4	4253168
YP_734726.1	CDS	Shewmr4_2598	NC_008321.1	3094659	3095600	R	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase	complement(3094659..3095600)	Shewanella sp. MR-4	4253169
YP_734727.1	CDS	Shewmr4_2599	NC_008321.1	3095670	3096104	R	KEGG: son:SO1675 hypothetical protein; hypothetical protein	complement(3095670..3096104)	Shewanella sp. MR-4	4253170
YP_734728.1	CDS	Shewmr4_2600	NC_008321.1	3096189	3096965	D	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO1674 short chain dehydrogenase family protein; short-chain dehydrogenase/reductase SDR	3096189..3096965	Shewanella sp. MR-4	4253171
YP_734729.1	CDS	Shewmr4_2601	NC_008321.1	3097049	3097696	R	receptor for colicin S4; outer membrane protein W	complement(3097049..3097696)	Shewanella sp. MR-4	4253172
YP_734730.1	CDS	Shewmr4_2602	NC_008321.1	3098155	3098742	R	PFAM: protein of unknown function DUF925; KEGG: son:SO1672 hypothetical protein; hypothetical protein	complement(3098155..3098742)	Shewanella sp. MR-4	4253173
YP_734731.1	CDS	Shewmr4_2603	NC_008321.1	3099026	3099676	R	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO1671 glutathione S-transferase family protein; maleylacetoacetate isomerase	complement(3099026..3099676)	Shewanella sp. MR-4	4253174
YP_734732.1	CDS	Shewmr4_2604	NC_008321.1	3099761	3100747	R	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: son:SO1670 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase	complement(3099761..3100747)	Shewanella sp. MR-4	4253175
YP_734733.1	CDS	Shewmr4_2605	NC_008321.1	3101085	3102623	R	PFAM: sigma-54 factor, interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; KEGG: son:SO1669 transcriptional regulatory protein TyrR; transcriptional regulator, TyrR	complement(3101085..3102623)	Shewanella sp. MR-4	4253176
YP_734734.1	CDS	phhB	NC_008321.1	3102899	3103237	R	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase	complement(3102899..3103237)	Shewanella sp. MR-4	4253177
YP_734735.1	CDS	phhA	NC_008321.1	3103320	3104135	R	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase	complement(3103320..3104135)	Shewanella sp. MR-4	4253178
YP_734736.1	CDS	Shewmr4_2608	NC_008321.1	3104459	3105367	D	KEGG: son:SO1665 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UDP-glucose pyrophosphorylase	3104459..3105367	Shewanella sp. MR-4	4253179
YP_734737.1	CDS	Shewmr4_2609	NC_008321.1	3105367	3106380	D	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO1664 UDP-glucose 4-epimerase; UDP-galactose 4-epimerase	3105367..3106380	Shewanella sp. MR-4	4253180
YP_734738.1	CDS	Shewmr4_2610	NC_008321.1	3106454	3106930	D	TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1663 ferredoxin-type protein NapF; ferredoxin-type protein NapF	3106454..3106930	Shewanella sp. MR-4	4253181
YP_734739.1	CDS	Shewmr4_2611	NC_008321.1	3107033	3107479	D	PFAM: protein of unknown function DUF583; KEGG: son:SO1662 hypothetical Ccm2-related protein; hypothetical protein	3107033..3107479	Shewanella sp. MR-4	4253182
YP_734740.1	CDS	Shewmr4_2612	NC_008321.1	3107715	3108767	D	PFAM: regulatory protein, LysR; KEGG: son:SO1661 transcriptional regulator, LysR family; LysR family transcriptional regulator	3107715..3108767	Shewanella sp. MR-4	4253183
YP_734741.1	CDS	Shewmr4_2613	NC_008321.1	3109205	3111493	D	KEGG: son:SO1659 decaheme cytochrome c; decaheme cytochrome c	3109205..3111493	Shewanella sp. MR-4	4253184
YP_734742.1	CDS	Shewmr4_2614	NC_008321.1	3111587	3112282	R	KEGG: son:SO1658 hypothetical protein; hypothetical protein	complement(3111587..3112282)	Shewanella sp. MR-4	4253185
YP_734743.1	CDS	Shewmr4_2615	NC_008321.1	3112287	3113021	R	PFAM: protein of unknown function DUF218; KEGG: son:SO1657 hypothetical protein; hypothetical protein	complement(3112287..3113021)	Shewanella sp. MR-4	4253186
YP_734744.1	CDS	Shewmr4_2616	NC_008321.1	3113129	3114049	R	catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase	complement(3113129..3114049)	Shewanella sp. MR-4	4253187
YP_734745.1	CDS	Shewmr4_2617	NC_008321.1	3114112	3114918	R	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: son:SO1655 cysQ protein; 3'(2'),5'-bisphosphate nucleotidase	complement(3114112..3114918)	Shewanella sp. MR-4	4253188
YP_734746.1	CDS	Shewmr4_2618	NC_008321.1	3115265	3116344	R	KEGG: son:SO1653 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase	complement(3115265..3116344)	Shewanella sp. MR-4	4253189
YP_734747.1	CDS	Shewmr4_2619	NC_008321.1	3116382	3117140	R	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: son:SO1652 putative histidinol phosphatase; putative hydrolase	complement(3116382..3117140)	Shewanella sp. MR-4	4253190
YP_734748.1	CDS	Shewmr4_2620	NC_008321.1	3117228	3120476	R	PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: son:SO1651 Snf2 family protein; SNF2-like protein	complement(3117228..3120476)	Shewanella sp. MR-4	4253191
YP_734749.1	CDS	Shewmr4_2621	NC_008321.1	3120661	3122484	R	PFAM: protein of unknown function DUF885; KEGG: cps:CPS_4234 hypothetical protein; hypothetical protein	complement(3120661..3122484)	Shewanella sp. MR-4	4253192
YP_734750.1	CDS	Shewmr4_2622	NC_008321.1	3123011	3123220	D	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: son:SO1648 cold shock domain family protein; cold-shock DNA-binding protein family protein	3123011..3123220	Shewanella sp. MR-4	4253193
YP_734751.1	CDS	Shewmr4_2623	NC_008321.1	3123608	3125554	R	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: son:SO1647 glutathione-regulated potassium-efflux system protein KefB, putative; potassium efflux system protein	complement(3123608..3125554)	Shewanella sp. MR-4	4253194
YP_734752.1	CDS	Shewmr4_2624	NC_008321.1	3125724	3126614	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1646 GGDEF family protein; diguanylate cyclase	3125724..3126614	Shewanella sp. MR-4	4253195
YP_734753.1	CDS	Shewmr4_2625	NC_008321.1	3126665	3128062	R	TIGRFAM: tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase-like; PFAM: PP-loop domain protein; KEGG: son:SO1645 cell cycle protein MesJ; tRNA(Ile)-lysidine synthetase	complement(3126665..3128062)	Shewanella sp. MR-4	4253196
YP_734754.1	CDS	dnaE	NC_008321.1	3128142	3131618	R	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha	complement(3128142..3131618)	Shewanella sp. MR-4	4253197
YP_734755.1	CDS	rnhB	NC_008321.1	3131736	3132365	R	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII	complement(3131736..3132365)	Shewanella sp. MR-4	4253198
YP_734756.1	CDS	lpxB	NC_008321.1	3132365	3133522	R	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase	complement(3132365..3133522)	Shewanella sp. MR-4	4253199
YP_734757.1	CDS	Shewmr4_2629	NC_008321.1	3133639	3134409	R	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase	complement(3133639..3134409)	Shewanella sp. MR-4	4253200
YP_734758.1	CDS	fabZ	NC_008321.1	3134406	3134870	R	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase	complement(3134406..3134870)	Shewanella sp. MR-4	4253201
YP_734759.1	CDS	lpxD	NC_008321.1	3134903	3135928	R	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	complement(3134903..3135928)	Shewanella sp. MR-4	4253202
YP_734760.1	CDS	Shewmr4_2632	NC_008321.1	3135932	3136429	R	PFAM: outer membrane chaperone Skp (OmpH); KEGG: son:SO1638 outer membrane protein OmpH; outer membrane chaperone Skp (OmpH)	complement(3135932..3136429)	Shewanella sp. MR-4	4253203
YP_734761.1	CDS	Shewmr4_2633	NC_008321.1	3136495	3138975	R	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: son:SO1637 bacterial surface antigen; surface antigen (D15)	complement(3136495..3138975)	Shewanella sp. MR-4	4253204
YP_734762.1	CDS	Shewmr4_2634	NC_008321.1	3139007	3140377	R	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: son:SO1636 membrane-associated zinc metalloprotease, putative; peptidase RseP	complement(3139007..3140377)	Shewanella sp. MR-4	4253205
YP_734763.1	CDS	Shewmr4_2635	NC_008321.1	3140428	3141618	R	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase	complement(3140428..3141618)	Shewanella sp. MR-4	4253206
YP_734764.1	CDS	Shewmr4_2636	NC_008321.1	3141623	3142480	R	PFAM: phosphatidate cytidylyltransferase; KEGG: son:SO1634 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase	complement(3141623..3142480)	Shewanella sp. MR-4	4253207
YP_734765.1	CDS	Shewmr4_2637	NC_008321.1	3142501	3143328	R	KEGG: son:SO1633 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl pyrophosphate synthetase	complement(3142501..3143328)	Shewanella sp. MR-4	4253208
YP_734766.1	CDS	frr	NC_008321.1	3143411	3143968	R	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor	complement(3143411..3143968)	Shewanella sp. MR-4	4253209
YP_734767.1	CDS	pyrH	NC_008321.1	3143999	3144727	R	Catalyzes the phosphorylation of UMP to UDP; uridylate kinase	complement(3143999..3144727)	Shewanella sp. MR-4	4253210
YP_734768.1	CDS	tsf	NC_008321.1	3144797	3145648	R	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts	complement(3144797..3145648)	Shewanella sp. MR-4	4253211
YP_734769.1	CDS	rpsB	NC_008321.1	3145768	3146496	R	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2	complement(3145768..3146496)	Shewanella sp. MR-4	4253212
YP_734770.1	CDS	Shewmr4_2642	NC_008321.1	3146767	3147603	D	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase	3146767..3147603	Shewanella sp. MR-4	4253213
YP_734771.1	CDS	Shewmr4_2643	NC_008321.1	3147672	3150257	D	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase	3147672..3150257	Shewanella sp. MR-4	4253214
YP_734772.1	CDS	dapD	NC_008321.1	3150276	3151100	D	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase	3150276..3151100	Shewanella sp. MR-4	4253215
YP_734773.1	CDS	Shewmr4_2645	NC_008321.1	3151322	3151675	D	KEGG: sdn:Sden_1550 hypothetical protein; hypothetical protein	3151322..3151675	Shewanella sp. MR-4	4253216
YP_734774.1	CDS	Shewmr4_2646	NC_008321.1	3151828	3153756	R	PFAM: CBS domain containing protein; GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: mag:amb0553 response regulator; metal dependent phosphohydrolase	complement(3151828..3153756)	Shewanella sp. MR-4	4253217
YP_734775.1	CDS	purU	NC_008321.1	3153965	3154867	R	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase	complement(3153965..3154867)	Shewanella sp. MR-4	4253218
YP_734776.1	CDS	Shewmr4_2648	NC_008321.1	3154997	3156478	R	TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: son:SO1623 PTS system, glucose-specific IIBC component; PTS system, glucose-like IIB subunit	complement(3154997..3156478)	Shewanella sp. MR-4	4253219
YP_734777.1	CDS	Shewmr4_2649	NC_008321.1	3156430	3156894	R	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin	complement(3156430..3156894)	Shewanella sp. MR-4	4253220
YP_734778.1	CDS	Shewmr4_2650	NC_008321.1	3157324	3158178	R	PFAM: pseudouridine synthase; KEGG: sdn:Sden_1546 pseudouridylate synthase; tRNA pseudouridine synthase C	complement(3157324..3158178)	Shewanella sp. MR-4	4253221
YP_734779.1	CDS	Shewmr4_2651	NC_008321.1	3158165	3158500	R	PFAM: protein of unknown function DUF446; KEGG: son:SO1619 hypothetical protein; hypothetical protein	complement(3158165..3158500)	Shewanella sp. MR-4	4253222
YP_734780.1	CDS	Shewmr4_2652	NC_008321.1	3158632	3159645	D	KEGG: son:SO1618 hypothetical protein; hypothetical protein	3158632..3159645	Shewanella sp. MR-4	4253223
YP_734781.1	CDS	Shewmr4_2653	NC_008321.1	3159642	3160028	D	KEGG: son:SO1617 hypothetical protein; hypothetical protein	3159642..3160028	Shewanella sp. MR-4	4253224
YP_734782.1	CDS	Shewmr4_2654	NC_008321.1	3161686	3161991	R	KEGG: son:SO1615 hypothetical protein; hypothetical protein	complement(3161686..3161991)	Shewanella sp. MR-4	4253225
YP_734783.1	CDS	Shewmr4_2655	NC_008321.1	3161984	3162622	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1614 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(3161984..3162622)	Shewanella sp. MR-4	4253226
YP_734784.1	CDS	Shewmr4_2656	NC_008321.1	3162767	3163000	D	KEGG: son:SO1613 hypothetical protein; hypothetical protein	3162767..3163000	Shewanella sp. MR-4	4253227
YP_734785.1	CDS	Shewmr4_2657	NC_008321.1	3163049	3163447	R	KEGG: son:SO1612 hypothetical protein; hypothetical protein	complement(3163049..3163447)	Shewanella sp. MR-4	4253228
YP_734786.1	CDS	Shewmr4_2658	NC_008321.1	3163595	3163978	D	KEGG: son:SO1611 hypothetical protein; hypothetical protein	3163595..3163978	Shewanella sp. MR-4	4253229
YP_734787.1	CDS	Shewmr4_2659	NC_008321.1	3163978	3164751	D	KEGG: son:SO1610 hypothetical protein; hypothetical protein	3163978..3164751	Shewanella sp. MR-4	4253230
YP_734788.1	CDS	Shewmr4_2660	NC_008321.1	3164854	3165504	R	putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd	complement(3164854..3165504)	Shewanella sp. MR-4	4253231
YP_734789.1	CDS	queF	NC_008321.1	3165564	3166424	D	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase	3165564..3166424	Shewanella sp. MR-4	4253232
YP_734790.1	CDS	Shewmr4_2662	NC_008321.1	3166519	3167259	R	PFAM: SpoOM family protein; KEGG: pha:PSHAa0857 SpoOM-related protein; SpoOM family protein	complement(3166519..3167259)	Shewanella sp. MR-4	4253233
YP_734791.1	CDS	Shewmr4_2663	NC_008321.1	3167320	3167841	R	KEGG: son:SO1605 lipoprotein, putative; putative lipoprotein	complement(3167320..3167841)	Shewanella sp. MR-4	4253234
YP_734792.1	CDS	Shewmr4_2664	NC_008321.1	3168099	3169088	R	PFAM: 4'-phosphopantetheinyl transferase; KEGG: son:SO1604 4'-phosphopantetheinyl transferase family protein; 4'-phosphopantetheinyl transferase	complement(3168099..3169088)	Shewanella sp. MR-4	4253235
YP_734793.1	CDS	Shewmr4_2665	NC_008321.1	3169469	3170338	D	KEGG: son:SO1603 transcriptional regulator, putative; transcriptional regulator	3169469..3170338	Shewanella sp. MR-4	4253236
YP_734794.1	CDS	Shewmr4_2666	NC_008321.1	3170335	3178308	D	PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: ppr:PBPRA1460 omega-3 polyunsaturated fatty acid synthase PfaA; beta-ketoacyl synthase	3170335..3178308	Shewanella sp. MR-4	4253237
YP_734795.1	CDS	Shewmr4_2667	NC_008321.1	3178413	3180719	D	KEGG: sdn:Sden_2628 omega-3 polyunsaturated fatty acid synthase PfaB; omega-3 polyunsaturated fatty acid synthase PfaB	3178413..3180719	Shewanella sp. MR-4	4253238
YP_734796.1	CDS	Shewmr4_2668	NC_008321.1	3180728	3186673	D	PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: son:SO1599 multi-domain beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ	3180728..3186673	Shewanella sp. MR-4	4253239
YP_734797.1	CDS	Shewmr4_2669	NC_008321.1	3186831	3188483	D	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: son:SO1597 hypothetical protein; 2-nitropropane dioxygenase, NPD	3186831..3188483	Shewanella sp. MR-4	4253240
YP_734798.1	CDS	Shewmr4_2670	NC_008321.1	3188977	3189417	D	KEGG: rfr:Rfer_1414 hypothetical protein; hypothetical protein	3188977..3189417	Shewanella sp. MR-4	4253241
YP_734799.1	CDS	Shewmr4_2671	NC_008321.1	3189974	3190201	D	PFAM: protein of unknown function DUF1328; KEGG: sdn:Sden_3712 protein of unknown function DUF1328; hypothetical protein	3189974..3190201	Shewanella sp. MR-4	4253242
YP_734800.1	CDS	Shewmr4_2672	NC_008321.1	3190224	3190418	D	KEGG: sdn:Sden_3711 hypothetical protein; hypothetical protein	3190224..3190418	Shewanella sp. MR-4	4253243
YP_734801.1	CDS	Shewmr4_2673	NC_008321.1	3190573	3192270	D	PFAM: Dual specificity protein phosphatase; diacylglycerol kinase, catalytic region; SMART: protein tyrosine phosphatase, catalytic region; KEGG: sdn:Sden_3710 diacylglycerol kinase, catalytic region; hypothetical protein	3190573..3192270	Shewanella sp. MR-4	4253244
YP_734802.1	CDS	Shewmr4_2674	NC_008321.1	3192357	3193766	R	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: sdn:Sden_3709 sigma-54 factor, interaction region; sigma-54 dependent trancsriptional regulator	complement(3192357..3193766)	Shewanella sp. MR-4	4253245
YP_734803.1	CDS	Shewmr4_2675	NC_008321.1	3194020	3194496	D	KEGG: sdn:Sden_3708 hypothetical protein; hypothetical protein	3194020..3194496	Shewanella sp. MR-4	4253246
YP_734804.1	CDS	Shewmr4_2676	NC_008321.1	3194769	3195317	D	PFAM: transport-associated; KEGG: sdn:Sden_3707 transport-associated; transport-associated	3194769..3195317	Shewanella sp. MR-4	4253247
YP_734805.1	CDS	Shewmr4_2677	NC_008321.1	3195451	3195867	R	KEGG: son:SO1590 hypothetical protein; hypothetical protein	complement(3195451..3195867)	Shewanella sp. MR-4	4253248
YP_734806.1	CDS	Shewmr4_2678	NC_008321.1	3195992	3196840	R	KEGG: son:SO1589 hypothetical protein; hypothetical protein	complement(3195992..3196840)	Shewanella sp. MR-4	4253249
YP_734807.1	CDS	Shewmr4_2679	NC_008321.1	3196969	3197559	R	PFAM: Phosphoglycerate mutase; KEGG: vvy:VVA1671 fructose-2;6-bisphosphatase; phosphoglycerate mutase	complement(3196969..3197559)	Shewanella sp. MR-4	4253250
YP_734808.1	CDS	Shewmr4_2680	NC_008321.1	3197629	3198129	R	hypothetical protein	complement(3197629..3198129)	Shewanella sp. MR-4	4253251
YP_734809.1	CDS	Shewmr4_2681	NC_008321.1	3198316	3199359	R	PFAM: porin, Gram-negative type; KEGG: son:SO3896 outer membrane porin, putative; porin	complement(3198316..3199359)	Shewanella sp. MR-4	4253252
YP_734810.1	CDS	Shewmr4_2682	NC_008321.1	3199450	3200793	R	PFAM: major facilitator superfamily MFS_1; KEGG: vpa:VPA0824 putative regulatory protein UhpC; major facilitator transporter	complement(3199450..3200793)	Shewanella sp. MR-4	4253253
YP_734811.1	CDS	Shewmr4_2683	NC_008321.1	3201113	3202426	D	KEGG: vpa:VPA0825 putative phosphoglycerate transport regulatory protein PgtC; putative phosphoglycerate transport regulatory protein PgtC	3201113..3202426	Shewanella sp. MR-4	4253254
YP_734812.1	CDS	Shewmr4_2684	NC_008321.1	3202429	3204801	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ppr:PBPRA2770 hypothetical phosphoglycerate transport regulatory protein PgtB; periplasmic sensor signal transduction histidine kinase	3202429..3204801	Shewanella sp. MR-4	4253255
YP_734813.1	CDS	Shewmr4_2685	NC_008321.1	3204791	3206068	D	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; KEGG: ppr:PBPRA2771 phosphoglycerate transport system transcription regulator; two component, sigma54 specific, Fis family transcriptional regulator	3204791..3206068	Shewanella sp. MR-4	4253256
YP_734814.1	CDS	Shewmr4_2686	NC_008321.1	3206235	3206477	D	KEGG: son:SO1588 hypothetical protein; hypothetical protein	3206235..3206477	Shewanella sp. MR-4	4253257
YP_734815.1	CDS	Shewmr4_2687	NC_008321.1	3206486	3206992	R	KEGG: son:SO1587 hypothetical protein; hypothetical protein	complement(3206486..3206992)	Shewanella sp. MR-4	4253258
YP_734816.1	CDS	Shewmr4_2688	NC_008321.1	3207126	3207734	R	PFAM: cyclic nucleotide-binding; KEGG: son:SO1586 hypothetical cyclic nucleotide-binding domain protein; cyclic nucleotide-binding protein	complement(3207126..3207734)	Shewanella sp. MR-4	4253259
YP_734817.1	CDS	Shewmr4_2689	NC_008321.1	3207739	3208365	R	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: son:SO1585 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase	complement(3207739..3208365)	Shewanella sp. MR-4	4253260
YP_734818.1	CDS	Shewmr4_2690	NC_008321.1	3208414	3209427	R	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO1583 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase	complement(3208414..3209427)	Shewanella sp. MR-4	4253261
YP_734819.1	CDS	Shewmr4_2691	NC_008321.1	3209497	3210033	R	PFAM: regulatory protein, MarR; KEGG: son:SO1582 transcriptional regulator, MarR family; MarR family transcriptional regulator	complement(3209497..3210033)	Shewanella sp. MR-4	4253262
YP_734820.1	CDS	Shewmr4_2692	NC_008321.1	3210210	3210773	R	PFAM: PhnA protein; KEGG: son:SO1581 PhnA protein; PhnA protein	complement(3210210..3210773)	Shewanella sp. MR-4	4253263
YP_734821.1	CDS	Shewmr4_2693	NC_008321.1	3211116	3211829	D	TIGRFAM: conserved hypothetical protein; KEGG: son:SO1579 hypothetical protein; hypothetical protein	3211116..3211829	Shewanella sp. MR-4	4253264
YP_734822.1	CDS	Shewmr4_2694	NC_008321.1	3211892	3212503	R	PFAM: regulatory protein, TetR; KEGG: son:SO1578 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(3211892..3212503)	Shewanella sp. MR-4	4253265
YP_734823.1	CDS	Shewmr4_2695	NC_008321.1	3212659	3213285	D	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO1577 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein	3212659..3213285	Shewanella sp. MR-4	4253266
YP_734824.1	CDS	Shewmr4_2696	NC_008321.1	3213347	3214015	D	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO1576 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein	3213347..3214015	Shewanella sp. MR-4	4253267
YP_734825.1	CDS	Shewmr4_2697	NC_008321.1	3214192	3215565	D	PFAM: Fmu (Sun) domain protein; KEGG: son:SO1575 NOL1/NOP2/sun family putative RNA methylase; Fmu (Sun) domain-containing protein	3214192..3215565	Shewanella sp. MR-4	4253268
YP_734826.1	CDS	Shewmr4_2698	NC_008321.1	3216129	3216293	D	KEGG: son:SO1572 hypothetical protein; hypothetical protein	3216129..3216293	Shewanella sp. MR-4	4253269
YP_734827.1	CDS	Shewmr4_2699	NC_008321.1	3216533	3219658	D	KEGG: son:SO1571 hypothetical protein; hypothetical protein	3216533..3219658	Shewanella sp. MR-4	4253270
YP_734828.1	CDS	Shewmr4_2700	NC_008321.1	3219763	3221430	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; KEGG: son:SO1570 GGDEF domain protein; diguanylate cyclase	complement(3219763..3221430)	Shewanella sp. MR-4	4253271
YP_734829.1	CDS	Shewmr4_2701	NC_008321.1	3221628	3222479	D	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1569 integral membrane domain protein; hypothetical protein	3221628..3222479	Shewanella sp. MR-4	4253272
YP_734830.1	CDS	Shewmr4_2702	NC_008321.1	3222539	3223078	R	PFAM: YfaZ family protein; KEGG: son:SO1568 hypothetical protein; YfaZ family protein	complement(3222539..3223078)	Shewanella sp. MR-4	4253273
YP_734831.1	CDS	Shewmr4_2703	NC_008321.1	3223242	3223751	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1566 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(3223242..3223751)	Shewanella sp. MR-4	4253274
YP_734832.1	CDS	Shewmr4_2704	NC_008321.1	3223780	3225150	R	PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: son:SO1565 magnesium transporter, putative; MgtE intracellular region	complement(3223780..3225150)	Shewanella sp. MR-4	4253275
YP_734833.1	CDS	Shewmr4_2705	NC_008321.1	3225298	3225783	D	PFAM: glutathione peroxidase; KEGG: son:SO1563 glutathione peroxidase; glutathione peroxidase	3225298..3225783	Shewanella sp. MR-4	4253276
YP_734834.1	CDS	Shewmr4_2706	NC_008321.1	3226383	3228200	R	PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1561 peptidase, M1 family; peptidase M1, membrane alanine aminopeptidase	complement(3226383..3228200)	Shewanella sp. MR-4	4253277
YP_734835.1	CDS	Shewmr4_2707	NC_008321.1	3228669	3229640	R	TIGRFAM: phosphate binding protein; KEGG: son:SO1560 phosphate-binding protein; phosphate binding protein	complement(3228669..3229640)	Shewanella sp. MR-4	4253278
YP_734836.1	CDS	Shewmr4_2708	NC_008321.1	3229867	3231165	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: son:SO1559 phosphate regulon sensor protein PhoR; PAS/PAC sensor signal transduction histidine kinase	complement(3229867..3231165)	Shewanella sp. MR-4	4253279
YP_734837.1	CDS	Shewmr4_2709	NC_008321.1	3231246	3231935	R	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO1558 phosphate regulon response regulator PhoB; two component transcriptional regulator	complement(3231246..3231935)	Shewanella sp. MR-4	4253280
YP_734838.1	CDS	Shewmr4_2710	NC_008321.1	3232121	3233065	R	PFAM: porin, Gram-negative type; KEGG: son:SO1557 outer membrane porin, putative; porin	complement(3232121..3233065)	Shewanella sp. MR-4	4253281
YP_734839.1	CDS	rdgC	NC_008321.1	3233358	3234272	D	Required for efficient pilin antigenic variation; recombination associated protein	3233358..3234272	Shewanella sp. MR-4	4253282
YP_734840.1	CDS	Shewmr4_2712	NC_008321.1	3234500	3236311	R	PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: sdn:Sden_2554 peptidase M61; peptidase M61 domain-containing protein	complement(3234500..3236311)	Shewanella sp. MR-4	4253283
YP_734841.1	CDS	Shewmr4_2713	NC_008321.1	3236452	3238614	D	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO1552 TPR domain protein; TPR repeat-containing protein	3236452..3238614	Shewanella sp. MR-4	4253284
YP_734842.1	CDS	Shewmr4_2714	NC_008321.1	3238765	3240321	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1551 GGDEF domain protein; diguanylate cyclase	3238765..3240321	Shewanella sp. MR-4	4253285
YP_734843.1	CDS	Shewmr4_2715	NC_008321.1	3240378	3241733	D	PFAM: conserved hypothetical protein 730; KEGG: son:SO1550 hypothetical protein; hypothetical protein	3240378..3241733	Shewanella sp. MR-4	4253286
YP_734844.1	CDS	xni	NC_008321.1	3241748	3242530	D	has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX	3241748..3242530	Shewanella sp. MR-4	4253287
YP_734845.1	CDS	Shewmr4_2717	NC_008321.1	3242641	3243069	D	KEGG: son:SO1548 hypothetical protein; hypothetical protein	3242641..3243069	Shewanella sp. MR-4	4253288
YP_734846.1	CDS	Shewmr4_2718	NC_008321.1	3244417	3245454	D	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ece:Z1444 putative serine/threonine kinase encoded by bacteriophage BP-933W; serine/threonine protein kinase	3244417..3245454	Shewanella sp. MR-4	4253289
YP_734847.1	CDS	Shewmr4_2719	NC_008321.1	3246152	3248968	R	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: son:SO1539 hypothetical protein; peptidase S9 prolyl oligopeptidase	complement(3246152..3248968)	Shewanella sp. MR-4	4253290
YP_734848.1	CDS	Shewmr4_2720	NC_008321.1	3249223	3250233	D	catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase	3249223..3250233	Shewanella sp. MR-4	4253291
YP_734849.1	CDS	Shewmr4_2721	NC_008321.1	3250368	3251453	R	KEGG: son:SO1536 hypothetical protein; putative RNA 2'-O-ribose methyltransferase	complement(3250368..3251453)	Shewanella sp. MR-4	4253292
YP_734850.1	CDS	Shewmr4_2722	NC_008321.1	3251607	3251999	R	PFAM: protein of unknown function DUF423; KEGG: son:SO1535 hypothetical protein; hypothetical protein	complement(3251607..3251999)	Shewanella sp. MR-4	4253293
YP_734851.1	CDS	Shewmr4_2723	NC_008321.1	3252087	3252758	R	KEGG: son:SO1534 hypothetical protein; hypothetical protein	complement(3252087..3252758)	Shewanella sp. MR-4	4253294
YP_734852.1	CDS	Shewmr4_2724	NC_008321.1	3252739	3253650	R	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA	complement(3252739..3253650)	Shewanella sp. MR-4	4253295
YP_734853.1	CDS	Shewmr4_2725	NC_008321.1	3253827	3254060	D	KEGG: son:SO1532 hypothetical protein; hypothetical protein	3253827..3254060	Shewanella sp. MR-4	4253296
YP_734854.1	CDS	Shewmr4_2726	NC_008321.1	3254212	3255666	R	Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI	complement(3254212..3255666)	Shewanella sp. MR-4	4253297
YP_734855.1	CDS	motB	NC_008321.1	3255883	3256803	R	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar motor protein MotB	complement(3255883..3256803)	Shewanella sp. MR-4	4253298
YP_734856.1	CDS	Shewmr4_2728	NC_008321.1	3256807	3257574	R	Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein PomA	complement(3256807..3257574)	Shewanella sp. MR-4	4253299
YP_734857.1	CDS	Shewmr4_2729	NC_008321.1	3257890	3258129	D	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: sdn:Sden_2569 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit	3257890..3258129	Shewanella sp. MR-4	4253300
YP_734858.1	CDS	Shewmr4_2730	NC_008321.1	3258132	3259013	D	PFAM: Polyprenyl synthetase; KEGG: son:SO1526 geranyltranstransferase; farnesyl-diphosphate synthase	3258132..3259013	Shewanella sp. MR-4	4253301
YP_734859.1	CDS	Shewmr4_2731	NC_008321.1	3259035	3260903	D	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase	3259035..3260903	Shewanella sp. MR-4	4253302
YP_734860.1	CDS	Shewmr4_2732	NC_008321.1	3261047	3261658	R	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE	complement(3261047..3261658)	Shewanella sp. MR-4	4253303
YP_734861.1	CDS	ppnK	NC_008321.1	3261707	3262636	D	catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase	3261707..3262636	Shewanella sp. MR-4	4253304
YP_734862.1	CDS	Shewmr4_2734	NC_008321.1	3263388	3265034	D	PFAM: L-lactate permease; KEGG: son:SO1522 L-lactate permease, putative; L-lactate permease	3263388..3265034	Shewanella sp. MR-4	4253305
YP_734863.1	CDS	Shewmr4_2735	NC_008321.1	3265098	3267902	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: son:SO1521 iron-sulfur cluster-binding protein; FAD linked oxidase domain-containing protein	3265098..3267902	Shewanella sp. MR-4	4253306
YP_734864.1	CDS	Shewmr4_2736	NC_008321.1	3268204	3268947	D	PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: son:SO1520 hypothetical protein; hypothetical protein	3268204..3268947	Shewanella sp. MR-4	4253307
YP_734865.1	CDS	Shewmr4_2737	NC_008321.1	3268958	3270352	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1519 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	3268958..3270352	Shewanella sp. MR-4	4253308
YP_734866.1	CDS	Shewmr4_2738	NC_008321.1	3270354	3270923	D	PFAM: protein of unknown function DUF162; KEGG: son:SO1518 hypothetical protein; hypothetical protein	3270354..3270923	Shewanella sp. MR-4	4253309
YP_734867.1	CDS	Shewmr4_2739	NC_008321.1	3271195	3271548	R	PFAM: protein of unknown function DUF1428; KEGG: sdn:Sden_1972 protein of unknown function DUF1428; hypothetical protein	complement(3271195..3271548)	Shewanella sp. MR-4	4253310
YP_734868.1	CDS	Shewmr4_2740	NC_008321.1	3271695	3272162	R	hypothetical protein	complement(3271695..3272162)	Shewanella sp. MR-4	4253311
YP_734869.1	CDS	Shewmr4_2741	NC_008321.1	3273063	3274172	D	PFAM: protein of unknown function UPF0118; KEGG: mca:MCA0120 hypothetical protein; hypothetical protein	3273063..3274172	Shewanella sp. MR-4	4253312
YP_734870.1	CDS	Shewmr4_2742	NC_008321.1	3274162	3275715	D	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A1740 RND efflux system, outer membrane lipoprotein, NodT; RND efflux system outer membrane lipoprotein	3274162..3275715	Shewanella sp. MR-4	4253313
YP_734871.1	CDS	Shewmr4_2743	NC_008321.1	3275708	3276802	D	PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_1711 secretion protein HlyD; secretion protein HlyD family protein	3275708..3276802	Shewanella sp. MR-4	4253314
YP_734872.1	CDS	Shewmr4_2744	NC_008321.1	3276811	3277836	D	KEGG: pfo:Pfl_2137 hypothetical protein; hypothetical protein	3276811..3277836	Shewanella sp. MR-4	4253315
YP_734873.1	CDS	Shewmr4_2745	NC_008321.1	3277838	3278254	D	PFAM: Ion transport 2 domain protein; KEGG: rme:Rmet_1713 ion transport 2; Ion transport 2 domain-containing protein	3277838..3278254	Shewanella sp. MR-4	4253316
YP_734874.1	CDS	Shewmr4_2746	NC_008321.1	3278480	3279991	R	KEGG: son:SO1507 hypothetical protein; hypothetical protein	complement(3278480..3279991)	Shewanella sp. MR-4	4253317
YP_734875.1	CDS	Shewmr4_2747	NC_008321.1	3280220	3281572	R	PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO1506 MATE efflux family protein; multi anti extrusion protein MatE	complement(3280220..3281572)	Shewanella sp. MR-4	4253318
YP_734876.1	CDS	Shewmr4_2748	NC_008321.1	3281991	3283535	D	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO1505 transporter, putative; major facilitator transporter	3281991..3283535	Shewanella sp. MR-4	4253319
YP_734877.1	CDS	Shewmr4_2749	NC_008321.1	3283679	3284200	R	KEGG: son:SO1504 hypothetical protein; hypothetical protein	complement(3283679..3284200)	Shewanella sp. MR-4	4253320
YP_734878.1	CDS	Shewmr4_2750	NC_008321.1	3284538	3285314	D	KEGG: son:SO1503 ABC transporter, periplasmic substrate-binding protein, putative; ABC transporter periplasmic substrate-binding protein	3284538..3285314	Shewanella sp. MR-4	4253321
YP_734879.1	CDS	Shewmr4_2751	NC_008321.1	3285393	3286511	R	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: son:SO1502 cobalamin synthesis protein/P47K family protein; cobalamin synthesis protein, P47K	complement(3285393..3286511)	Shewanella sp. MR-4	4253322
YP_734880.1	CDS	Shewmr4_2752	NC_008321.1	3286620	3288005	R	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO1501 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	complement(3286620..3288005)	Shewanella sp. MR-4	4253323
YP_734881.1	CDS	Shewmr4_2753	NC_008321.1	3288201	3291230	R	KEGG: son:SO1500 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	complement(3288201..3291230)	Shewanella sp. MR-4	4253324
YP_734882.1	CDS	Shewmr4_2754	NC_008321.1	3291341	3292930	R	PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: son:SO1499 glycogen synthase; starch synthase	complement(3291341..3292930)	Shewanella sp. MR-4	4253325
YP_734883.1	CDS	glgC	NC_008321.1	3292998	3294260	R	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase	complement(3292998..3294260)	Shewanella sp. MR-4	4253326
YP_734884.1	CDS	Shewmr4_2756	NC_008321.1	3294379	3296892	R	KEGG: son:SO1496 glycogen phosphorylase family protein; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylases	complement(3294379..3296892)	Shewanella sp. MR-4	4253327
YP_734885.1	CDS	Shewmr4_2757	NC_008321.1	3296895	3299153	R	KEGG: son:SO1495 glycogen operon protein; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching enzyme GlgX	complement(3296895..3299153)	Shewanella sp. MR-4	4253328
YP_734886.1	CDS	Shewmr4_2758	NC_008321.1	3299150	3301387	R	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme	complement(3299150..3301387)	Shewanella sp. MR-4	4253329
YP_734887.1	CDS	Shewmr4_2759	NC_008321.1	3301405	3303795	R	KEGG: son:SO1493 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase	complement(3301405..3303795)	Shewanella sp. MR-4	4253330
YP_734888.1	CDS	Shewmr4_2760	NC_008321.1	3304309	3304944	D	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO1492 peptidyl-prolyl cis-trans isomerase, cyclophilin family; peptidyl-prolyl cis-trans isomerase, cyclophilin type	3304309..3304944	Shewanella sp. MR-4	4253331
YP_734889.1	CDS	Shewmr4_2761	NC_008321.1	3305017	3305514	R	PFAM: regulatory protein, MarR; KEGG: sdn:Sden_0718 regulatory protein, MarR; MarR family transcriptional regulator	complement(3305017..3305514)	Shewanella sp. MR-4	4253332
YP_734890.1	CDS	Shewmr4_2762	NC_008321.1	3305821	3306969	D	PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO1490 alcohol dehydrogenase II; iron-containing alcohol dehydrogenase	3305821..3306969	Shewanella sp. MR-4	4253333
YP_734891.1	CDS	Shewmr4_2763	NC_008321.1	3307661	3308035	D	KEGG: son:SO1489 hypothetical protein; hypothetical protein	3307661..3308035	Shewanella sp. MR-4	4253334
YP_734892.1	CDS	Shewmr4_2764	NC_008321.1	3308351	3308563	D	KEGG: son:SO1487 hypothetical protein; hypothetical protein	3308351..3308563	Shewanella sp. MR-4	4253335
YP_734893.1	CDS	Shewmr4_2765	NC_008321.1	3308601	3308969	R	PFAM: thioesterase superfamily protein; KEGG: son:SO1486 cytosolic long-chain acyl-CoA thioester hydrolase family protein; thioesterase superfamily protein	complement(3308601..3308969)	Shewanella sp. MR-4	4253336
YP_734894.1	CDS	Shewmr4_2766	NC_008321.1	3309344	3310666	R	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: son:SO1484 isocitrate lyase; isocitrate lyase	complement(3309344..3310666)	Shewanella sp. MR-4	4253337
YP_734895.1	CDS	Shewmr4_2767	NC_008321.1	3310810	3312459	R	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase	complement(3310810..3312459)	Shewanella sp. MR-4	4253338
YP_734896.1	CDS	Shewmr4_2768	NC_008321.1	3313295	3315766	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1482 TonB-dependent receptor, putative; TonB-dependent receptor	3313295..3315766	Shewanella sp. MR-4	4253339
YP_734897.1	CDS	Shewmr4_2769	NC_008321.1	3315835	3317604	R	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: son:SO1481 glutathione-regulated potassium-efflux system protein; potassium efflux system protein	complement(3315835..3317604)	Shewanella sp. MR-4	4253340
YP_734898.1	CDS	Shewmr4_2770	NC_008321.1	3317828	3319555	R	KEGG: son:SO1480 GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: Tetratricopeptide domain protein; diguanylate cyclase	complement(3317828..3319555)	Shewanella sp. MR-4	4253341
YP_734899.1	CDS	Shewmr4_2771	NC_008321.1	3319619	3319831	R	KEGG: son:SO1479 hypothetical protein; hypothetical protein	complement(3319619..3319831)	Shewanella sp. MR-4	4253342
YP_734900.1	CDS	Shewmr4_2772	NC_008321.1	3319876	3320667	R	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: son:SO1478 methylase, putative; uroporphyrin-III C/tetrapyrrole methyltransferase	complement(3319876..3320667)	Shewanella sp. MR-4	4253343
YP_734901.1	CDS	Shewmr4_2773	NC_008321.1	3321041	3321565	D	PFAM: SmpA/OmlA domain protein; KEGG: son:SO1476 small protein A; SmpA/OmlA domain-containing protein	3321041..3321565	Shewanella sp. MR-4	4253344
YP_734902.1	CDS	Shewmr4_2774	NC_008321.1	3321642	3321977	R	PFAM: protein of unknown function UPF0125; KEGG: son:SO1475 hypothetical protein; hypothetical protein	complement(3321642..3321977)	Shewanella sp. MR-4	4253345
YP_734903.1	CDS	Shewmr4_2775	NC_008321.1	3321967	3322404	R	PFAM: cyclase/dehydrase; KEGG: son:SO1474 hypothetical protein; cyclase/dehydrase	complement(3321967..3322404)	Shewanella sp. MR-4	4253346
YP_734904.1	CDS	smpB	NC_008321.1	3322658	3323149	D	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein	3322658..3323149	Shewanella sp. MR-4	4253347
YP_734905.1	CDS	Shewmr4_2777	NC_008321.1	3323742	3324986	D	PFAM: phage integrase family protein; KEGG: vch:VC0847 integrase, phage family; phage integrase family protein	3323742..3324986	Shewanella sp. MR-4	4253348
YP_734906.1	CDS	Shewmr4_2778	NC_008321.1	3325040	3327697	R	PFAM: type III restriction enzyme, res subunit; KEGG: tbd:Tbd_2275 hypothetical protein; type III restriction enzyme, res subunit	complement(3325040..3327697)	Shewanella sp. MR-4	4253349
YP_734907.1	CDS	Shewmr4_2779	NC_008321.1	3327699	3329567	R	PFAM: DNA methylase N-4/N-6 domain protein; KEGG: tbd:Tbd_2276 adenine specific DNA methylase; DNA methylase N-4/N-6 domain-containing protein	complement(3327699..3329567)	Shewanella sp. MR-4	4253350
YP_734908.1	CDS	Shewmr4_2780	NC_008321.1	3329622	3329795	R	TIGRFAM: DNA binding domain, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: vfi:VFA0534 hypothetical protein; phage transcriptional regulator, AlpA	complement(3329622..3329795)	Shewanella sp. MR-4	4253351
YP_734909.1	CDS	Shewmr4_2781	NC_008321.1	3329900	3330472	R	PFAM: Resolvase, N-terminal domain protein; KEGG: ppr:PBPRA0888 hypothetical resolvase; resolvase domain-containing protein	complement(3329900..3330472)	Shewanella sp. MR-4	4253352
YP_734910.1	CDS	Shewmr4_2782	NC_008321.1	3330635	3331738	R	PFAM: phage integrase family protein; KEGG: ctc:CTC01567 DNA integration/recombination protein; phage integrase family protein	complement(3330635..3331738)	Shewanella sp. MR-4	4253353
YP_734911.1	CDS	Shewmr4_2783	NC_008321.1	3331722	3332213	R	KEGG: rde:RD1_2231 hypothetical protein; hypothetical protein	complement(3331722..3332213)	Shewanella sp. MR-4	4253354
YP_734912.1	CDS	Shewmr4_2784	NC_008321.1	3332206	3332406	R	PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV0262 prophage regulatory protein; phage transcriptional regulator, AlpA	complement(3332206..3332406)	Shewanella sp. MR-4	4253355
YP_734913.1	CDS	Shewmr4_2785	NC_008321.1	3332510	3333409	R	KEGG: eca:ECA2751 putative phage-related protein; hypothetical protein	complement(3332510..3333409)	Shewanella sp. MR-4	4253356
YP_734914.1	CDS	Shewmr4_2786	NC_008321.1	3334447	3336147	R	KEGG: son:SO1425 hypothetical protein; hypothetical protein	complement(3334447..3336147)	Shewanella sp. MR-4	4253357
YP_734915.1	CDS	Shewmr4_2787	NC_008321.1	3336157	3338394	R	KEGG: son:SO1424 hypothetical protein; hypothetical protein	complement(3336157..3338394)	Shewanella sp. MR-4	4253358
YP_734916.1	CDS	Shewmr4_2788	NC_008321.1	3339154	3339456	R	PFAM: Heavy metal transport/detoxification protein; KEGG: son:SO1407 mercuric transport periplasmic protein MerP, putative; heavy metal transport/detoxification protein	complement(3339154..3339456)	Shewanella sp. MR-4	4253359
YP_734917.1	CDS	Shewmr4_2789	NC_008321.1	3339453	3339770	R	KEGG: son:SO1406 mercuric transport protein MerT, putative; mercuric transport protein MerT	complement(3339453..3339770)	Shewanella sp. MR-4	4253360
YP_734918.1	CDS	Shewmr4_2790	NC_008321.1	3339787	3340926	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: transglutaminase domain protein; KEGG: son:SO1405 transglutaminase family protein; twin-arginine translocation pathway signal	complement(3339787..3340926)	Shewanella sp. MR-4	4253361
YP_734919.1	CDS	Shewmr4_2791	NC_008321.1	3341178	3342449	R	KEGG: vpa:VP2175 putative HAAAP family transport protein; HAAAP family transport protein	complement(3341178..3342449)	Shewanella sp. MR-4	4253362
YP_734920.1	CDS	Shewmr4_2792	NC_008321.1	3342706	3343089	D	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative; putative endoribonuclease L-PSP	3342706..3343089	Shewanella sp. MR-4	4253363
YP_734921.1	CDS	Shewmr4_2793	NC_008321.1	3343112	3344386	D	PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein; hypothetical protein	3343112..3344386	Shewanella sp. MR-4	4253364
YP_734922.1	CDS	Shewmr4_2794	NC_008321.1	3344428	3345108	D	PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein; YheO domain-containing protein	3344428..3345108	Shewanella sp. MR-4	4253365
YP_734923.1	CDS	Shewmr4_2795	NC_008321.1	3345187	3346917	R	KEGG: son:SO1401 hypothetical protein; hypothetical protein	complement(3345187..3346917)	Shewanella sp. MR-4	4253366
YP_734924.1	CDS	Shewmr4_2796	NC_008321.1	3346986	3347900	R	PFAM: protein of unknown function DUF368; KEGG: son:SO1400 hypothetical protein; hypothetical protein	complement(3346986..3347900)	Shewanella sp. MR-4	4253367
YP_734925.1	CDS	Shewmr4_2797	NC_008321.1	3348138	3348632	D	KEGG: sdn:Sden_2841 hypothetical protein; hypothetical protein	3348138..3348632	Shewanella sp. MR-4	4253368
YP_734926.1	CDS	Shewmr4_2798	NC_008321.1	3348732	3349169	D	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: son:SO1397 cytosine deaminase; cytosine deaminase	3348732..3349169	Shewanella sp. MR-4	4253369
YP_734927.1	CDS	Shewmr4_2799	NC_008321.1	3349314	3350558	D	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: son:SO1396 hypothetical protein; hypothetical protein	3349314..3350558	Shewanella sp. MR-4	4253370
YP_734928.1	CDS	Shewmr4_2800	NC_008321.1	3350536	3351009	D	PFAM: protein of unknown function DUF1294; KEGG: son:SO1395 membrane protein,putative; hypothetical protein	3350536..3351009	Shewanella sp. MR-4	4253371
YP_734929.1	CDS	Shewmr4_2801	NC_008321.1	3351018	3351626	R	PFAM: regulatory protein, TetR; KEGG: son:SO1393 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(3351018..3351626)	Shewanella sp. MR-4	4253372
YP_734930.1	CDS	Shewmr4_2802	NC_008321.1	3351878	3352357	D	PFAM: HPP family protein; KEGG: son:SO1392 hypothetical protein; HPP family protein	3351878..3352357	Shewanella sp. MR-4	4253373
YP_734931.1	CDS	Shewmr4_2803	NC_008321.1	3352489	3353817	R	PFAM: short chain fatty acid transporter; KEGG: son:SO1391 short-chain fatty acids transporter; short chain fatty acid transporter	complement(3352489..3353817)	Shewanella sp. MR-4	4253374
YP_734932.1	CDS	Shewmr4_2804	NC_008321.1	3354039	3354509	D	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1390 peptidyl-prolyl cis-trans isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type	3354039..3354509	Shewanella sp. MR-4	4253375
YP_734933.1	CDS	Shewmr4_2805	NC_008321.1	3354576	3357182	R	KEGG: sdn:Sden_2136 chitinase; PFAM: PKD domain containing protein; glycoside hydrolase, family 18; Carbohydrate-binding family V/XII; Chitinase A N-terminal domain protein; SMART: chitinase II; glycosyl hydrolase family chitinase	complement(3354576..3357182)	Shewanella sp. MR-4	4253376
YP_734934.1	CDS	Shewmr4_2806	NC_008321.1	3357825	3358616	R	PFAM: ROK family protein; KEGG: son:SO1389 ROK family protein; ROK family protein	complement(3357825..3358616)	Shewanella sp. MR-4	4253377
YP_734935.1	CDS	Shewmr4_2807	NC_008321.1	3358978	3360795	D	PFAM: peptidase M24; KEGG: son:SO1388 aminopeptidase P, putative; peptidase M24	3358978..3360795	Shewanella sp. MR-4	4253378
YP_734936.1	CDS	Shewmr4_2808	NC_008321.1	3361263	3362831	D	KEGG: son:SO1385 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor	3361263..3362831	Shewanella sp. MR-4	4253379
YP_734937.1	CDS	Shewmr4_2809	NC_008321.1	3363156	3364457	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO1383 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	3363156..3364457	Shewanella sp. MR-4	4253380
YP_734938.1	CDS	Shewmr4_2810	NC_008321.1	3364689	3365582	R	KEGG: son:SO1382 hypothetical protein; hypothetical protein	complement(3364689..3365582)	Shewanella sp. MR-4	4253381
YP_734939.1	CDS	Shewmr4_2811	NC_008321.1	3365890	3366537	D	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO1381 hypothetical protein; redoxin domain-containing protein	3365890..3366537	Shewanella sp. MR-4	4253382
YP_734940.1	CDS	Shewmr4_2812	NC_008321.1	3366667	3367302	D	KEGG: son:SO1380 hypothetical protein; hypothetical protein	3366667..3367302	Shewanella sp. MR-4	4253383
YP_734941.1	CDS	Shewmr4_2813	NC_008321.1	3367421	3368170	D	KEGG: sdn:Sden_0883 hypothetical protein; hypothetical protein	3367421..3368170	Shewanella sp. MR-4	4253384
YP_734942.1	CDS	Shewmr4_2814	NC_008321.1	3368280	3368588	R	KEGG: son:SO1379 hypothetical protein; hypothetical protein	complement(3368280..3368588)	Shewanella sp. MR-4	4253385
YP_734943.1	CDS	Shewmr4_2815	NC_008321.1	3368693	3369253	R	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: son:SO1378 ThiJ/PfpI family protein; PfpI family intracellular peptidase	complement(3368693..3369253)	Shewanella sp. MR-4	4253386
YP_734944.1	CDS	Shewmr4_2816	NC_008321.1	3369410	3371188	R	PFAM: band 7 protein; KEGG: son:SO1377 hypothetical protein; hypothetical protein	complement(3369410..3371188)	Shewanella sp. MR-4	4253387
YP_734945.1	CDS	Shewmr4_2817	NC_008321.1	3371222	3371857	R	PFAM: protein of unknown function DUF1449; KEGG: son:SO1376 hypothetical protein; hypothetical protein	complement(3371222..3371857)	Shewanella sp. MR-4	4253388
YP_734946.1	CDS	Shewmr4_2818	NC_008321.1	3371964	3372530	R	KEGG: eli:ELI_10435 hypothetical protein; hypothetical protein	complement(3371964..3372530)	Shewanella sp. MR-4	4253389
YP_734947.1	CDS	Shewmr4_2819	NC_008321.1	3372600	3374105	D	PFAM: peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: son:SO1375 carboxypeptidase; carboxypeptidase Taq	3372600..3374105	Shewanella sp. MR-4	4253390
YP_734948.1	CDS	Shewmr4_2820	NC_008321.1	3374224	3374718	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1374 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	3374224..3374718	Shewanella sp. MR-4	4253391
YP_734949.1	CDS	Shewmr4_2821	NC_008321.1	3374715	3375068	D	PFAM: protein of unknown function DUF486; KEGG: son:SO1373 hypothetical protein; hypothetical protein	3374715..3375068	Shewanella sp. MR-4	4253392
YP_734950.1	CDS	Shewmr4_2822	NC_008321.1	3375106	3375363	D	KEGG: son:SO1372 hypothetical protein; hypothetical protein	3375106..3375363	Shewanella sp. MR-4	4253393
YP_734951.1	CDS	Shewmr4_2823	NC_008321.1	3375403	3375912	D	PFAM: RDD domain containing protein; KEGG: son:SO1371 hypothetical protein; RDD domain-containing protein	3375403..3375912	Shewanella sp. MR-4	4253394
YP_734952.1	CDS	Shewmr4_2824	NC_008321.1	3375962	3376627	D	hypothetical protein	3375962..3376627	Shewanella sp. MR-4	4253395
YP_734953.1	CDS	Shewmr4_2825	NC_008321.1	3376689	3377747	R	PFAM: permease YjgP/YjgQ family protein; KEGG: son:SO1370 hypothetical protein; permease YjgP/YjgQ family protein	complement(3376689..3377747)	Shewanella sp. MR-4	4253396
YP_734954.1	CDS	Shewmr4_2826	NC_008321.1	3377744	3378856	R	PFAM: permease YjgP/YjgQ family protein; KEGG: son:SO1369 hypothetical protein; permease YjgP/YjgQ family protein	complement(3377744..3378856)	Shewanella sp. MR-4	4253397
YP_734955.1	CDS	Shewmr4_2827	NC_008321.1	3379112	3380620	D	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase	3379112..3380620	Shewanella sp. MR-4	4253398
YP_734956.1	CDS	Shewmr4_2828	NC_008321.1	3380953	3382956	D	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; KEGG: son:SO1367 prephenate dehydratase / chorismate mutase / phospho-2-dehydro-3-deoxyheptonate aldolase; prephenate dehydratase / chorismate mutase	3380953..3382956	Shewanella sp. MR-4	4253399
YP_734957.1	CDS	Shewmr4_2829	NC_008321.1	3383102	3384406	R	PFAM: sodium/hydrogen exchanger; KEGG: son:SO1366 sodium/hydrogen exchanger family protein; sodium/hydrogen exchanger	complement(3383102..3384406)	Shewanella sp. MR-4	4253400
YP_734958.1	CDS	Shewmr4_2830	NC_008321.1	3384452	3384787	R	KEGG: son:SO1365 hypothetical protein; hypothetical protein	complement(3384452..3384787)	Shewanella sp. MR-4	4253401
YP_734959.1	CDS	Shewmr4_2831	NC_008321.1	3384951	3386081	R	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: son:SO1364 iron-sulfur cluster-binding protein; oxidoreductase FAD-binding subunit	complement(3384951..3386081)	Shewanella sp. MR-4	4253402
YP_734960.1	CDS	Shewmr4_2832	NC_008321.1	3386132	3387796	R	catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase	complement(3386132..3387796)	Shewanella sp. MR-4	4253403
YP_734961.1	CDS	tyrA	NC_008321.1	3388014	3389153	R	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase	complement(3388014..3389153)	Shewanella sp. MR-4	4253404
YP_734962.1	CDS	Shewmr4_2834	NC_008321.1	3389216	3390307	R	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(3389216..3390307)	Shewanella sp. MR-4	4253405
YP_734963.1	CDS	rplS	NC_008321.1	3390973	3391326	R	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19	complement(3390973..3391326)	Shewanella sp. MR-4	4253406
YP_734964.1	CDS	trmD	NC_008321.1	3391361	3392107	R	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase	complement(3391361..3392107)	Shewanella sp. MR-4	4253407
YP_734965.1	CDS	rimM	NC_008321.1	3392123	3392653	R	Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM	complement(3392123..3392653)	Shewanella sp. MR-4	4253408
YP_734966.1	CDS	rpsP	NC_008321.1	3392674	3392922	R	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16	complement(3392674..3392922)	Shewanella sp. MR-4	4253409
YP_734967.1	CDS	Shewmr4_2839	NC_008321.1	3393141	3394514	R	with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein	complement(3393141..3394514)	Shewanella sp. MR-4	4253410
YP_734968.1	CDS	Shewmr4_2840	NC_008321.1	3394803	3395591	D	PFAM: cytochrome c assembly protein; KEGG: son:SO1355 hypothetical protein; cytochrome c assembly protein	3394803..3395591	Shewanella sp. MR-4	4253411
YP_734969.1	CDS	Shewmr4_2841	NC_008321.1	3395693	3396964	D	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: son:SO1354 hemolysin protein, putative; hypothetical protein	3395693..3396964	Shewanella sp. MR-4	4253412
YP_734970.1	CDS	Shewmr4_2842	NC_008321.1	3397030	3397566	R	PFAM: protein of unknown function DUF962; KEGG: son:SO1353 hypothetical protein; hypothetical protein	complement(3397030..3397566)	Shewanella sp. MR-4	4253413
YP_734971.1	CDS	Shewmr4_2843	NC_008321.1	3397756	3398193	R	PFAM: transposase IS200-family protein; KEGG: vch:VCA0275 IS1004 transposase; transposase IS200-family protein	complement(3397756..3398193)	Shewanella sp. MR-4	4253414
YP_734972.1	CDS	acpS	NC_008321.1	3398357	3398740	R	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase	complement(3398357..3398740)	Shewanella sp. MR-4	4253415
YP_734973.1	CDS	Shewmr4_2845	NC_008321.1	3398740	3399477	R	involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase	complement(3398740..3399477)	Shewanella sp. MR-4	4253416
YP_734974.1	CDS	Shewmr4_2846	NC_008321.1	3399567	3400268	R	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: son:SO1350 DNA repair protein RecO; DNA repair protein RecO	complement(3399567..3400268)	Shewanella sp. MR-4	4253417
YP_734975.1	CDS	era	NC_008321.1	3400318	3401337	R	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era	complement(3400318..3401337)	Shewanella sp. MR-4	4253418
YP_734976.1	CDS	rnc	NC_008321.1	3401334	3402014	R	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III	complement(3401334..3402014)	Shewanella sp. MR-4	4253419
YP_734977.1	CDS	Shewmr4_2849	NC_008321.1	3402016	3402933	R	KEGG: son:SO1347 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I	complement(3402016..3402933)	Shewanella sp. MR-4	4253420
YP_734978.1	CDS	Shewmr4_2850	NC_008321.1	3403113	3404903	R	binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA	complement(3403113..3404903)	Shewanella sp. MR-4	4253421
YP_734979.1	CDS	Shewmr4_2851	NC_008321.1	3405071	3405544	R	PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: son:SO1345 sigma-E factor regulatory protein RseC; positive regulator of sigma(E), RseC/MucC	complement(3405071..3405544)	Shewanella sp. MR-4	4253422
YP_734980.1	CDS	Shewmr4_2852	NC_008321.1	3405556	3406488	R	PFAM: MucB/RseB family protein; KEGG: son:SO1344 sigma-E factor regulatory protein RseB; sigma E regulatory protein, MucB/RseB	complement(3405556..3406488)	Shewanella sp. MR-4	4253423
YP_734981.1	CDS	Shewmr4_2853	NC_008321.1	3406501	3407124	R	PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: son:SO1343 sigma-E factor negative regulatory protein; anti sigma-E protein, RseA	complement(3406501..3407124)	Shewanella sp. MR-4	4253424
YP_734982.1	CDS	Shewmr4_2854	NC_008321.1	3407151	3407729	R	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE	complement(3407151..3407729)	Shewanella sp. MR-4	4253425
YP_734983.1	CDS	Shewmr4_2855	NC_008321.1	3407919	3409532	D	catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase	3407919..3409532	Shewanella sp. MR-4	4253426
YP_734984.1	CDS	Shewmr4_2856	NC_008321.1	3409648	3410088	R	KEGG: son:SO1340 hypothetical protein; hypothetical protein	complement(3409648..3410088)	Shewanella sp. MR-4	4253427
YP_734985.1	CDS	Shewmr4_2857	NC_008321.1	3410069	3410308	R	PFAM: protein of unknown function DUF339; KEGG: son:SO1339 hypothetical protein; hypothetical protein	complement(3410069..3410308)	Shewanella sp. MR-4	4253428
YP_734986.1	CDS	nhaR	NC_008321.1	3410401	3411309	R	Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR	complement(3410401..3411309)	Shewanella sp. MR-4	4253429
YP_734987.1	CDS	Shewmr4_2859	NC_008321.1	3411405	3411791	R	KEGG: son:SO1337 hypothetical protein; hypothetical protein	complement(3411405..3411791)	Shewanella sp. MR-4	4253430
YP_734988.1	CDS	nhaA	NC_008321.1	3411794	3412963	R	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter	complement(3411794..3412963)	Shewanella sp. MR-4	4253431
YP_734989.1	CDS	thyA	NC_008321.1	3413081	3413875	R	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase	complement(3413081..3413875)	Shewanella sp. MR-4	4253432
YP_734990.1	CDS	Shewmr4_2862	NC_008321.1	3413875	3414681	R	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase	complement(3413875..3414681)	Shewanella sp. MR-4	4253433
YP_734991.1	CDS	Shewmr4_2863	NC_008321.1	3414727	3415527	R	PFAM: protein of unknown function DUF81; KEGG: son:SO1333 hypothetical protein; hypothetical protein	complement(3414727..3415527)	Shewanella sp. MR-4	4253434
YP_734992.1	CDS	Shewmr4_2864	NC_008321.1	3415586	3417820	R	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: son:SO1332 phosphoenolpyruvate-protein phosphotransferase PtsP; phosphoenolpyruvate-protein phosphotransferase PtsP	complement(3415586..3417820)	Shewanella sp. MR-4	4253435
YP_734993.1	CDS	Shewmr4_2865	NC_008321.1	3417844	3418368	R	hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase	complement(3417844..3418368)	Shewanella sp. MR-4	4253436
YP_734994.1	CDS	Shewmr4_2866	NC_008321.1	3419060	3419731	D	MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein	3419060..3419731	Shewanella sp. MR-4	4253437
YP_734995.1	CDS	Shewmr4_2867	NC_008321.1	3419915	3420922	D	KEGG: son:SO1329 adenylate cyclase-related protein; putative adenylate/guanylate cyclase	3419915..3420922	Shewanella sp. MR-4	4253438
YP_734996.1	CDS	Shewmr4_2868	NC_008321.1	3420948	3421859	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1328 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(3420948..3421859)	Shewanella sp. MR-4	4253439
YP_734997.1	CDS	Shewmr4_2869	NC_008321.1	3422078	3422443	R	PFAM: Hpt domain protein; KEGG: son:SO1327 sensor histidine kinase-related protein; Hpt protein	complement(3422078..3422443)	Shewanella sp. MR-4	4253440
YP_734998.1	CDS	Shewmr4_2870	NC_008321.1	3422628	3423557	R	KEGG: son:SO1326 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein	complement(3422628..3423557)	Shewanella sp. MR-4	4253441
YP_734999.1	CDS	Shewmr4_2871	NC_008321.1	3423557	3423796	R	hypothetical protein	complement(3423557..3423796)	Shewanella sp. MR-4	4253442
YP_735000.1	CDS	gltB	NC_008321.1	3424144	3428592	D	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha	3424144..3428592	Shewanella sp. MR-4	4253443
YP_735001.1	CDS	gltD	NC_008321.1	3428599	3430005	D	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta	3428599..3430005	Shewanella sp. MR-4	4253444
YP_735002.1	CDS	Shewmr4_2874	NC_008321.1	3430253	3430963	D	PFAM: purine and other phosphorylases, family 1; KEGG: son:SO1322 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase; methylthioadenosine nucleosidase	3430253..3430963	Shewanella sp. MR-4	4253445
YP_735003.1	CDS	Shewmr4_2875	NC_008321.1	3430995	3431987	D	PFAM: cobalamin biosynthesis protein CbiB; KEGG: son:SO1321 CobD-related protein; cobalamin biosynthesis protein CbiB	3430995..3431987	Shewanella sp. MR-4	4253446
YP_735004.1	CDS	Shewmr4_2876	NC_008321.1	3432043	3432420	D	KEGG: son:SO1320 hypothetical protein; hypothetical protein	3432043..3432420	Shewanella sp. MR-4	4253447
YP_735005.1	CDS	Shewmr4_2877	NC_008321.1	3432417	3433043	D	PFAM: protein of unknown function UPF0126; KEGG: son:SO1319 hypothetical protein; hypothetical protein	3432417..3433043	Shewanella sp. MR-4	4253448
YP_735006.1	CDS	Shewmr4_2878	NC_008321.1	3433045	3433536	D	KEGG: son:SO1318 hypothetical protein; hypothetical protein	3433045..3433536	Shewanella sp. MR-4	4253449
YP_735007.1	CDS	Shewmr4_2879	NC_008321.1	3433661	3434089	D	KEGG: son:SO1317 hypothetical protein; hypothetical protein	3433661..3434089	Shewanella sp. MR-4	4253450
YP_735008.1	CDS	Shewmr4_2880	NC_008321.1	3434242	3435468	R	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase	complement(3434242..3435468)	Shewanella sp. MR-4	4253451
YP_735009.1	CDS	Shewmr4_2881	NC_008321.1	3435566	3436966	D	PFAM: peptidase M23B; Opacity-associated protein A, N-terminal domain protein; KEGG: son:SO1314 peptidase, M23/M37 family; peptidase M23B	3435566..3436966	Shewanella sp. MR-4	4253452
YP_735010.1	CDS	anmK	NC_008321.1	3436986	3438095	D	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase	3436986..3438095	Shewanella sp. MR-4	4253453
YP_735011.1	CDS	Shewmr4_2883	NC_008321.1	3438105	3440255	R	PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: son:SO1312 TolB domain protein; transcriptional regulator domain-containing protein	complement(3438105..3440255)	Shewanella sp. MR-4	4253454
YP_735012.1	CDS	Shewmr4_2884	NC_008321.1	3440565	3442970	D	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: son:SO1310 hypothetical protein; glutamyl peptidase	3440565..3442970	Shewanella sp. MR-4	4253455
YP_735013.1	CDS	Shewmr4_2885	NC_008321.1	3443486	3446509	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1309 hypothetical TonB-dependent receptor; TonB-dependent receptor	complement(3443486..3446509)	Shewanella sp. MR-4	4253456
YP_735014.1	CDS	Shewmr4_2886	NC_008321.1	3447200	3447895	D	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z	3447200..3447895	Shewanella sp. MR-4	4253457
YP_735015.1	CDS	Shewmr4_2887	NC_008321.1	3448051	3448431	D	KEGG: son:SO1306 hypothetical protein; hypothetical protein	3448051..3448431	Shewanella sp. MR-4	4253458
YP_735016.1	CDS	Shewmr4_2888	NC_008321.1	3448450	3448905	D	KEGG: son:SO1305 hypothetical protein; hypothetical protein	3448450..3448905	Shewanella sp. MR-4	4253459
YP_735017.1	CDS	Shewmr4_2889	NC_008321.1	3449034	3449384	R	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA	complement(3449034..3449384)	Shewanella sp. MR-4	4253460
YP_735018.1	CDS	Shewmr4_2890	NC_008321.1	3449377	3450183	R	KEGG: son:SO1303 hypothetical protein; hypothetical protein	complement(3449377..3450183)	Shewanella sp. MR-4	4253461
YP_735019.1	CDS	Shewmr4_2891	NC_008321.1	3450258	3451982	D	PFAM: Cl- channel, voltage-gated family protein; KEGG: son:SO1302 chloride channel; Cl- channel, voltage-gated family protein	3450258..3451982	Shewanella sp. MR-4	4253462
YP_735020.1	CDS	Shewmr4_2892	NC_008321.1	3452173	3453192	D	Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate; aspartate carbamoyltransferase	3452173..3453192	Shewanella sp. MR-4	4253463
YP_735021.1	CDS	Shewmr4_2893	NC_008321.1	3453219	3454511	D	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase	3453219..3454511	Shewanella sp. MR-4	4253464
YP_735022.1	CDS	Shewmr4_2894	NC_008321.1	3455267	3456577	D	PFAM: Citrate transporter; KEGG: sdn:Sden_2820 citrate transporter; citrate transporter	3455267..3456577	Shewanella sp. MR-4	4253465
YP_735023.1	CDS	Shewmr4_2895	NC_008321.1	3456640	3457773	R	KEGG: son:SO1298 general secretion pathway protein B; general secretion pathway protein B	complement(3456640..3457773)	Shewanella sp. MR-4	4253466
YP_735024.1	CDS	Shewmr4_2896	NC_008321.1	3457773	3459461	R	PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: son:SO1297 general secretion pathway protein A; peptidoglycan binding domain-containing protein	complement(3457773..3459461)	Shewanella sp. MR-4	4253467
YP_735025.1	CDS	Shewmr4_2897	NC_008321.1	3459636	3460886	D	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: sdn:Sden_2823 polynucleotide adenylyltransferase region; metal dependent phosphohydrolase	3459636..3460886	Shewanella sp. MR-4	4253468
YP_735026.1	CDS	Shewmr4_2898	NC_008321.1	3461121	3461387	D	KEGG: son:SO1295 major outer membrane lipoprotein, putative; major outer membrane lipoprotein	3461121..3461387	Shewanella sp. MR-4	4253469
YP_735027.1	CDS	Shewmr4_2899	NC_008321.1	3462011	3462850	R	KEGG: son:SO1294 ribosomal RNA large subunit methyltransferase A, putative; rRNA (guanine-N(1)-)-methyltransferase	complement(3462011..3462850)	Shewanella sp. MR-4	4253470
YP_735028.1	CDS	Shewmr4_2900	NC_008321.1	3462935	3463735	R	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase	complement(3462935..3463735)	Shewanella sp. MR-4	4253471
YP_735029.1	CDS	Shewmr4_2901	NC_008321.1	3463754	3464263	R	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: son:SO1292 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase	complement(3463754..3464263)	Shewanella sp. MR-4	4253472
YP_735030.1	CDS	Shewmr4_2902	NC_008321.1	3464314	3464664	R	TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: son:SO1291 dihydroneopterin aldolase; dihydroneopterin aldolase	complement(3464314..3464664)	Shewanella sp. MR-4	4253473
YP_735031.1	CDS	Shewmr4_2903	NC_008321.1	3464903	3465514	D	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY	3464903..3465514	Shewanella sp. MR-4	4253474
YP_735032.1	CDS	Shewmr4_2904	NC_008321.1	3465690	3466706	R	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease	complement(3465690..3466706)	Shewanella sp. MR-4	4253475
YP_735033.1	CDS	rpsU	NC_008321.1	3466921	3467136	D	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21	3466921..3467136	Shewanella sp. MR-4	4253476
YP_735034.1	CDS	Shewmr4_2906	NC_008321.1	3467143	3467586	D	PFAM: GatB/Yqey domain protein; KEGG: son:SO1287 hypothetical protein; GatB/Yqey domain-containing protein	3467143..3467586	Shewanella sp. MR-4	4253477
YP_735035.1	CDS	Shewmr4_2907	NC_008321.1	3467670	3469394	D	KEGG: son:SO1286 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase DnaG, DnaB-binding; DNA primase catalytic core, N-terminal domain protein; SMART: Toprim sub domain protein; DNA primase	3467670..3469394	Shewanella sp. MR-4	4253478
YP_735036.1	CDS	Shewmr4_2908	NC_008321.1	3469521	3471380	D	TIGRFAM: RNA polymerase sigma factor RpoD; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70, non-essential domain protein; sigma-70 region 1.2; KEGG: son:SO1284 RNA polymerase sigma-70 factor; RNA polymerase, sigma 70 subunit, RpoD	3469521..3471380	Shewanella sp. MR-4	4253479
YP_735037.1	CDS	Shewmr4_2909	NC_008321.1	3471962	3474082	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO1278 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3471962..3474082)	Shewanella sp. MR-4	4253480
YP_735038.1	CDS	Shewmr4_2910	NC_008321.1	3474502	3476052	D	TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: son:SO1277 proton-dependent oligopeptide transporter (POT) family protein; amino acid/peptide transporter	3474502..3476052	Shewanella sp. MR-4	4253481
YP_735039.1	CDS	Shewmr4_2911	NC_008321.1	3476422	3477468	D	PFAM: luciferase family protein; KEGG: pha:PSHAb0540 putative alkanal monooxygenase (FMN-linked); luciferase family protein	3476422..3477468	Shewanella sp. MR-4	4253482
YP_735040.1	CDS	Shewmr4_2912	NC_008321.1	3477521	3478798	R	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase	complement(3477521..3478798)	Shewanella sp. MR-4	4253483
YP_735041.1	CDS	Shewmr4_2913	NC_008321.1	3478901	3480349	R	KEGG: son:SO1275 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate semialdehyde dehydrogenase	complement(3478901..3480349)	Shewanella sp. MR-4	4253484
YP_735042.1	CDS	Shewmr4_2914	NC_008321.1	3480406	3481692	R	PFAM: FAD dependent oxidoreductase; KEGG: son:SO1274 probable oxidoreductase; FAD dependent oxidoreductase	complement(3480406..3481692)	Shewanella sp. MR-4	4253485
YP_735043.1	CDS	Shewmr4_2915	NC_008321.1	3481971	3482786	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1273 polyamine ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component	complement(3481971..3482786)	Shewanella sp. MR-4	4253486
YP_735044.1	CDS	Shewmr4_2916	NC_008321.1	3482783	3483688	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1272 polyamine ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component	complement(3482783..3483688)	Shewanella sp. MR-4	4253487
YP_735045.1	CDS	Shewmr4_2917	NC_008321.1	3483685	3484821	R	KEGG: son:SO1271 polyamine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase subunit	complement(3483685..3484821)	Shewanella sp. MR-4	4253488
YP_735046.1	CDS	Shewmr4_2918	NC_008321.1	3484981	3486144	R	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein; extracellular solute-binding protein	complement(3484981..3486144)	Shewanella sp. MR-4	4253489
YP_735047.1	CDS	Shewmr4_2919	NC_008321.1	3486698	3488053	R	PFAM: glutamine synthetase, catalytic region; KEGG: son:SO1268 glutamine synthetase; L-glutamine synthetase	complement(3486698..3488053)	Shewanella sp. MR-4	4253490
YP_735048.1	CDS	Shewmr4_2920	NC_008321.1	3488055	3488816	R	PFAM: peptidase C26; KEGG: son:SO1267 hypothetical glutamine amidotransferase; peptidase C26	complement(3488055..3488816)	Shewanella sp. MR-4	4253491
YP_735049.1	CDS	Shewmr4_2921	NC_008321.1	3489209	3489835	R	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: son:SO1265 transcriptional regulator, putative; XRE family transcriptional regulator	complement(3489209..3489835)	Shewanella sp. MR-4	4253492
YP_735050.1	CDS	Shewmr4_2922	NC_008321.1	3489992	3491299	D	PFAM: FAD dependent oxidoreductase; KEGG: son:SO1264 hypothetical oxidoreductase; FAD dependent oxidoreductase	3489992..3491299	Shewanella sp. MR-4	4253493
YP_735051.1	CDS	Shewmr4_2923	NC_008321.1	3491344	3491856	R	KEGG: son:SO1262 hypothetical protein; hypothetical protein	complement(3491344..3491856)	Shewanella sp. MR-4	4253494
YP_735052.1	CDS	Shewmr4_2924	NC_008321.1	3491941	3492798	R	PFAM: Rhodanese domain protein; KEGG: son:SO1261 mercaptopyruvate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase	complement(3491941..3492798)	Shewanella sp. MR-4	4253495
YP_735053.1	CDS	Shewmr4_2925	NC_008321.1	3492944	3493339	R	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ilo:IL1764 lipoprotein A family protein; rare lipoprotein A	complement(3492944..3493339)	Shewanella sp. MR-4	4253496
YP_735054.1	CDS	Shewmr4_2926	NC_008321.1	3493502	3494998	R	PFAM: aldehyde dehydrogenase; KEGG: son:SO3496 aldehyde dehydrogenase; aldehyde dehydrogenase (acceptor)	complement(3493502..3494998)	Shewanella sp. MR-4	4253497
YP_735055.1	CDS	Shewmr4_2927	NC_008321.1	3495279	3496619	D	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase	3495279..3496619	Shewanella sp. MR-4	4253498
YP_735056.1	CDS	Shewmr4_2928	NC_008321.1	3496671	3498161	D	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: hch:HCH_01157 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase	3496671..3498161	Shewanella sp. MR-4	4253499
YP_735057.1	CDS	Shewmr4_2929	NC_008321.1	3498178	3498543	D	PFAM: protein of unknown function DUF861, cupin_3; KEGG: son:SO3501 hypothetical protein; hypothetical protein	3498178..3498543	Shewanella sp. MR-4	4253500
YP_735058.1	CDS	Shewmr4_2930	NC_008321.1	3498728	3499450	D	TIGRFAM: conserved hypothetical protein; KEGG: son:SO3502 hypothetical protein; hypothetical protein	3498728..3499450	Shewanella sp. MR-4	4253501
YP_735059.1	CDS	Shewmr4_2931	NC_008321.1	3499515	3500813	R	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3503 glucose/galactose transporter; glucose/galactose transporter	complement(3499515..3500813)	Shewanella sp. MR-4	4253502
YP_735060.1	CDS	Shewmr4_2932	NC_008321.1	3501153	3502340	R	KEGG: son:SO3504 hypothetical protein; hypothetical protein	complement(3501153..3502340)	Shewanella sp. MR-4	4253503
YP_735061.1	CDS	Shewmr4_2933	NC_008321.1	3502479	3503615	R	KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine 6-phosphate deacetylase	complement(3502479..3503615)	Shewanella sp. MR-4	4253504
YP_735062.1	CDS	Shewmr4_2934	NC_008321.1	3503659	3504657	R	PFAM: sugar isomerase (SIS); KEGG: son:SO3506 glucosamine-6-phosphate isomerase; glutamine--fructose-6-phosphate transaminase (isomerizing)	complement(3503659..3504657)	Shewanella sp. MR-4	4253505
YP_735063.1	CDS	Shewmr4_2935	NC_008321.1	3504716	3505624	R	PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: son:SO3507 hypothetical protein; ATPase, BadF/BadG/BcrA/BcrD type	complement(3504716..3505624)	Shewanella sp. MR-4	4253506
YP_735064.1	CDS	Shewmr4_2936	NC_008321.1	3505848	3508538	R	PFAM: glycoside hydrolase, family 20; Carbohydrate-binding, chitobiase/hexosaminidase-type domain protein; glycoside hydrolase, family 20 domain protein; KEGG: son:SO3509 beta-hexosaminidase b precursor; Beta-N-acetylhexosaminidase	complement(3505848..3508538)	Shewanella sp. MR-4	4253507
YP_735065.1	CDS	Shewmr4_2937	NC_008321.1	3508567	3510054	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: sde:Sde_0391 putative methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer	complement(3508567..3510054)	Shewanella sp. MR-4	4253508
YP_735066.1	CDS	Shewmr4_2938	NC_008321.1	3510054	3511040	R	KEGG: sde:Sde_2658 type IV pilus assembly protein PilM; hypothetical protein	complement(3510054..3511040)	Shewanella sp. MR-4	4253509
YP_735067.1	CDS	Shewmr4_2939	NC_008321.1	3511531	3512433	D	PFAM: protein of unknown function DUF81; KEGG: cps:CPS_1011 hypothetical protein; hypothetical protein	3511531..3512433	Shewanella sp. MR-4	4253510
YP_735068.1	CDS	Shewmr4_2940	NC_008321.1	3512471	3513130	R	hypothetical protein	complement(3512471..3513130)	Shewanella sp. MR-4	4253511
YP_735069.1	CDS	Shewmr4_2941	NC_008321.1	3513142	3514677	R	PFAM: tryptophan halogenase; KEGG: sdn:Sden_2707 tryptophan halogenase; tryptophan halogenase	complement(3513142..3514677)	Shewanella sp. MR-4	4253512
YP_735070.1	CDS	Shewmr4_2942	NC_008321.1	3514740	3517403	R	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sdn:Sden_2708 TonB-dependent receptor; TonB-dependent receptor	complement(3514740..3517403)	Shewanella sp. MR-4	4253513
YP_735071.1	CDS	Shewmr4_2943	NC_008321.1	3517830	3518846	D	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: son:SO3516 transcriptional regulator, LacI family; LacI family transcription regulator	3517830..3518846	Shewanella sp. MR-4	4253514
YP_735072.1	CDS	Shewmr4_2944	NC_008321.1	3518907	3520196	R	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO3517 NADH dehydrogenase; NADH dehydrogenase	complement(3518907..3520196)	Shewanella sp. MR-4	4253515
YP_735073.1	CDS	Shewmr4_2945	NC_008321.1	3520389	3520727	R	PFAM: nitrogen regulatory protein P-II; KEGG: son:SO3519 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II	complement(3520389..3520727)	Shewanella sp. MR-4	4253516
YP_735074.1	CDS	Shewmr4_2946	NC_008321.1	3520965	3521477	D	PFAM: methylation site containing protein; KEGG: son:SO3520 type IV pilus biogenesis protein, putative; methylation site containing protein	3520965..3521477	Shewanella sp. MR-4	4253517
YP_735075.1	CDS	Shewmr4_2947	NC_008321.1	3521632	3522114	D	PFAM: methylation site containing protein; KEGG: son:SO3521 type IV pilus biogenesis protein, putative; methylation site containing protein	3521632..3522114	Shewanella sp. MR-4	4253518
YP_735076.1	CDS	Shewmr4_2948	NC_008321.1	3522143	3522442	R	KEGG: son:SO3523 hypothetical protein; hypothetical protein	complement(3522143..3522442)	Shewanella sp. MR-4	4253519
YP_735077.1	CDS	Shewmr4_2949	NC_008321.1	3522439	3522882	R	PFAM: methylation site containing protein; KEGG: son:SO3524 type IV pilus biogenesis protein PilE; methylation site containing protein	complement(3522439..3522882)	Shewanella sp. MR-4	4253520
YP_735078.1	CDS	Shewmr4_2950	NC_008321.1	3522891	3526424	R	KEGG: son:SO3525 type IV pilin biogenesis protein, putative; type IV pilin biogenesis protein	complement(3522891..3526424)	Shewanella sp. MR-4	4253521
YP_735079.1	CDS	Shewmr4_2951	NC_008321.1	3526428	3526880	R	KEGG: son:SO3526 type IV pilus assembly protein PilX; type IV pilus assembly protein PilX	complement(3526428..3526880)	Shewanella sp. MR-4	4253522
YP_735080.1	CDS	Shewmr4_2952	NC_008321.1	3526893	3527906	R	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: son:SO3527 type IV pilus assembly protein PilW; prepilin-type cleavage/methylation-like protein	complement(3526893..3527906)	Shewanella sp. MR-4	4253523
YP_735081.1	CDS	Shewmr4_2953	NC_008321.1	3527907	3528473	R	TIGRFAM: type IV pilus modification protein PilV; PFAM: methylation site containing protein; KEGG: son:SO3528 type IV pilus assembly protein PilV; type IV pilus modification protein PilV	complement(3527907..3528473)	Shewanella sp. MR-4	4253524
YP_735082.1	CDS	ispH	NC_008321.1	3528689	3529645	R	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase	complement(3528689..3529645)	Shewanella sp. MR-4	4253525
YP_735083.1	CDS	Shewmr4_2955	NC_008321.1	3529647	3530069	R	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO3530 peptidyl-prolyl cis-trans isomerase FkbP; peptidylprolyl isomerase, FKBP-type	complement(3529647..3530069)	Shewanella sp. MR-4	4253526
YP_735084.1	CDS	lspA	NC_008321.1	3530069	3530581	R	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase	complement(3530069..3530581)	Shewanella sp. MR-4	4253527
YP_735085.1	CDS	ileS	NC_008321.1	3530591	3533413	R	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase	complement(3530591..3533413)	Shewanella sp. MR-4	4253528
YP_735086.1	CDS	Shewmr4_2958	NC_008321.1	3533446	3534381	R	KEGG: son:SO3533 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; riboflavin kinase / FMN adenylyltransferase	complement(3533446..3534381)	Shewanella sp. MR-4	4253529
YP_735087.1	CDS	Shewmr4_2959	NC_008321.1	3534447	3536006	R	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: son:SO3534 MviN protein; integral membrane protein MviN	complement(3534447..3536006)	Shewanella sp. MR-4	4253530
YP_735088.1	CDS	rpsT	NC_008321.1	3536259	3536525	D	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20	3536259..3536525	Shewanella sp. MR-4	4253531
YP_735089.1	CDS	Shewmr4_2961	NC_008321.1	3536586	3536882	R	PFAM: regulatory protein, ArsR; KEGG: son:SO3538 transcriptional regulator HlyU; ArsR family transcriptional regulator	complement(3536586..3536882)	Shewanella sp. MR-4	4253532
YP_735090.1	CDS	Shewmr4_2962	NC_008321.1	3537018	3538424	D	PFAM: peptidase M20; peptidase M28; KEGG: son:SO3539 peptidase, M28D family; peptidase M28	3537018..3538424	Shewanella sp. MR-4	4253533
YP_735091.1	CDS	Shewmr4_2963	NC_008321.1	3538496	3539269	R	PFAM: protein of unknown function DUF328; KEGG: son:SO3540 hypothetical protein; hypothetical protein	complement(3538496..3539269)	Shewanella sp. MR-4	4253534
YP_735092.1	CDS	Shewmr4_2964	NC_008321.1	3539378	3540844	R	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO3541 sodium:alanine symporter family protein; amino acid carrier protein	complement(3539378..3540844)	Shewanella sp. MR-4	4253535
YP_735093.1	CDS	Shewmr4_2965	NC_008321.1	3541276	3543642	D	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: son:SO3542 putative phosphoketolase; putative phosphoketolase	3541276..3543642	Shewanella sp. MR-4	4253536
YP_735094.1	CDS	Shewmr4_2966	NC_008321.1	3543881	3544999	D	PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: son:SO3545 OmpA family protein; OmpA/MotB domain-containing protein	3543881..3544999	Shewanella sp. MR-4	4253537
YP_735095.1	CDS	Shewmr4_2967	NC_008321.1	3545248	3546204	D	KEGG: son:SO3546 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B	3545248..3546204	Shewanella sp. MR-4	4253538
YP_735096.1	CDS	pgi	NC_008321.1	3546225	3547862	D	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase	3546225..3547862	Shewanella sp. MR-4	4253539
YP_735097.1	CDS	Shewmr4_2969	NC_008321.1	3548079	3548264	D	KEGG: son:SO3548 hypothetical protein; hypothetical protein	3548079..3548264	Shewanella sp. MR-4	4253540
YP_735098.1	CDS	Shewmr4_2970	NC_008321.1	3548332	3548868	R	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: son:SO3549 hypothetical protein; hemerythrin HHE cation binding domain-containing protein	complement(3548332..3548868)	Shewanella sp. MR-4	4253541
YP_735099.1	CDS	Shewmr4_2971	NC_008321.1	3549090	3549812	R	KEGG: son:SO3550 hypothetical protein; hypothetical protein	complement(3549090..3549812)	Shewanella sp. MR-4	4253542
YP_735100.1	CDS	Shewmr4_2972	NC_008321.1	3549805	3550458	R	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO3551 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor	complement(3549805..3550458)	Shewanella sp. MR-4	4253543
YP_735101.1	CDS	Shewmr4_2973	NC_008321.1	3550455	3552329	R	PFAM: von Willebrand factor, type A; KEGG: son:SO3552 von Willebrand factor type A domain protein; von Willebrand factor, type A	complement(3550455..3552329)	Shewanella sp. MR-4	4253544
YP_735102.1	CDS	Shewmr4_2974	NC_008321.1	3552543	3554315	D	putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM	3552543..3554315	Shewanella sp. MR-4	4253545
YP_735103.1	CDS	Shewmr4_2975	NC_008321.1	3554571	3555062	D	KEGG: son:SO3554 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase, catalytic subunit	3554571..3555062	Shewanella sp. MR-4	4253546
YP_735104.1	CDS	Shewmr4_2976	NC_008321.1	3555062	3556159	D	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit	3555062..3556159	Shewanella sp. MR-4	4253547
YP_735105.1	CDS	Shewmr4_2977	NC_008321.1	3556314	3557576	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: son:SO3556 cyclic nucleotide phosphodiesterase, putative; diguanylate cyclase with GAF sensor	3556314..3557576	Shewanella sp. MR-4	4253548
YP_735106.1	CDS	Shewmr4_2978	NC_008321.1	3557652	3558269	R	KEGG: son:SO3557 hypothetical protein; hypothetical protein	complement(3557652..3558269)	Shewanella sp. MR-4	4253549
YP_735107.1	CDS	Shewmr4_2979	NC_008321.1	3558426	3558887	R	KEGG: son:SO3558 hypothetical protein; hypothetical protein	complement(3558426..3558887)	Shewanella sp. MR-4	4253550
YP_735108.1	CDS	Shewmr4_2980	NC_008321.1	3558887	3560536	R	involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase	complement(3558887..3560536)	Shewanella sp. MR-4	4253551
YP_735109.1	CDS	Shewmr4_2981	NC_008321.1	3560720	3563569	R	PFAM: peptidase M16 domain protein; KEGG: son:SO3560 peptidase, M16 family; peptidase M16 domain-containing protein	complement(3560720..3563569)	Shewanella sp. MR-4	4253552
YP_735110.1	CDS	Shewmr4_2982	NC_008321.1	3563711	3564136	R	KEGG: son:SO3561 hypothetical protein; hypothetical protein	complement(3563711..3564136)	Shewanella sp. MR-4	4253553
YP_735111.1	CDS	Shewmr4_2983	NC_008321.1	3564424	3565677	D	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO3562 proton/glutamate symporter, putative; sodium:dicarboxylate symporter	3564424..3565677	Shewanella sp. MR-4	4253554
YP_735112.1	CDS	Shewmr4_2984	NC_008321.1	3565836	3566003	D	KEGG: pha:PSHAa2250 hypothetical protein; hypothetical protein	3565836..3566003	Shewanella sp. MR-4	4253555
YP_735113.1	CDS	Shewmr4_2985	NC_008321.1	3566044	3567174	R	KEGG: vvy:VV2798 oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta	complement(3566044..3567174)	Shewanella sp. MR-4	4253556
YP_735114.1	CDS	Shewmr4_2986	NC_008321.1	3567183	3569018	R	catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase	complement(3567183..3569018)	Shewanella sp. MR-4	4253557
YP_735115.1	CDS	Shewmr4_2987	NC_008321.1	3569030	3569317	R	TIGRFAM: sodium pump decarboxylases, gamma subunit; PFAM: sodium pump decarboxylase, gamma subunit; KEGG: vvy:VV2800 oxaloacetate decarboxylase, gamma subunit; sodium pump decarboxylases subunit gamma	complement(3569030..3569317)	Shewanella sp. MR-4	4253558
YP_735116.1	CDS	Shewmr4_2988	NC_008321.1	3575126	3575224	R	KEGG: son:SO0043 hypothetical protein; hypothetical protein	complement(3575126..3575224)	Shewanella sp. MR-4	4253559
YP_735117.1	CDS	Shewmr4_2989	NC_008321.1	3575697	3576515	R	KEGG: son:SO3575 CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase	complement(3575697..3576515)	Shewanella sp. MR-4	4253560
YP_735118.1	CDS	Shewmr4_2990	NC_008321.1	3576607	3577071	D	KEGG: son:SO3576 hypothetical protein; hypothetical protein	3576607..3577071	Shewanella sp. MR-4	4253561
YP_735119.1	CDS	Shewmr4_2991	NC_008321.1	3577254	3579827	R	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: son:SO3577 clpB protein; ATPase	complement(3577254..3579827)	Shewanella sp. MR-4	4253562
YP_735120.1	CDS	Shewmr4_2992	NC_008321.1	3579946	3580734	R	PFAM: protein of unknown function DUF152; KEGG: son:SO3578 conserved hypothetical protein TIGR00726; hypothetical protein	complement(3579946..3580734)	Shewanella sp. MR-4	4253563
YP_735121.1	CDS	Shewmr4_2993	NC_008321.1	3580738	3581709	R	KEGG: sdn:Sden_2863 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; ribosomal large subunit pseudouridine synthase D	complement(3580738..3581709)	Shewanella sp. MR-4	4253564
YP_735122.1	CDS	Shewmr4_2994	NC_008321.1	3581745	3582593	D	KEGG: son:SO3580 putative lipoprotein; putative lipoprotein	3581745..3582593	Shewanella sp. MR-4	4253565
YP_735123.1	CDS	Shewmr4_2995	NC_008321.1	3583325	3584950	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3582 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	3583325..3584950	Shewanella sp. MR-4	4253566
YP_735124.1	CDS	Shewmr4_2996	NC_008321.1	3585126	3586319	D	PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: hch:HCH_01369 flavodoxin reductases (ferredoxin-NADPH reductases) family 1; globin	3585126..3586319	Shewanella sp. MR-4	4253567
YP_735125.1	CDS	Shewmr4_2997	NC_008321.1	3586412	3587137	R	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_2876 pseudouridine synthase, Rsu; pseudouridine synthase, Rsu	complement(3586412..3587137)	Shewanella sp. MR-4	4253568
YP_735126.1	CDS	Shewmr4_2998	NC_008321.1	3587152	3587772	R	PFAM: Helix-turn-helix, type 11 domain protein; KEGG: son:SO3584 hypothetical protein; transcriptional regulator	complement(3587152..3587772)	Shewanella sp. MR-4	4253569
YP_735127.1	CDS	Shewmr4_2999	NC_008321.1	3587919	3588533	D	PFAM: NADPH-dependent FMN reductase; KEGG: son:SO3585 azoreductase, putative; NADPH-dependent FMN reductase	3587919..3588533	Shewanella sp. MR-4	4253570
YP_735128.1	CDS	Shewmr4_3000	NC_008321.1	3588584	3589000	D	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO3586 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase	3588584..3589000	Shewanella sp. MR-4	4253571
YP_735129.1	CDS	Shewmr4_3001	NC_008321.1	3589145	3589615	D	KEGG: son:SO3587 hypothetical protein; hypothetical protein	3589145..3589615	Shewanella sp. MR-4	4253572
YP_735130.1	CDS	Shewmr4_3002	NC_008321.1	3589694	3590263	R	PFAM: GPR1/FUN34/yaaH family protein; KEGG: son:SO3588 gpr1/fun34/YaaH family protein; GPR1/FUN34/yaaH family protein	complement(3589694..3590263)	Shewanella sp. MR-4	4253573
YP_735131.1	CDS	Shewmr4_3003	NC_008321.1	3591002	3591238	D	KEGG: son:SO3591 hypothetical protein; hypothetical protein	3591002..3591238	Shewanella sp. MR-4	4253574
YP_735132.1	CDS	Shewmr4_3004	NC_008321.1	3591592	3592455	D	PFAM: MltA-interacting MipA family protein; KEGG: son:SO3592 putative outer membrane protein; MltA-interacting MipA family protein	3591592..3592455	Shewanella sp. MR-4	4253575
YP_735133.1	CDS	Shewmr4_3005	NC_008321.1	3592482	3592874	D	KEGG: son:SO3593 hypothetical protein; hypothetical protein	3592482..3592874	Shewanella sp. MR-4	4253576
YP_735134.1	CDS	Shewmr4_3006	NC_008321.1	3592874	3593587	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO3594 transcriptional regulatory protein RstA, putative; two component transcriptional regulator	3592874..3593587	Shewanella sp. MR-4	4253577
YP_735135.1	CDS	Shewmr4_3007	NC_008321.1	3593596	3594864	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO3595 sensor protein RstB, putative; periplasmic sensor signal transduction histidine kinase	3593596..3594864	Shewanella sp. MR-4	4253578
YP_735136.1	CDS	Shewmr4_3008	NC_008321.1	3594893	3595201	R	PFAM: protein of unknown function DUF1289; KEGG: son:SO3596 hypothetical protein; hypothetical protein	complement(3594893..3595201)	Shewanella sp. MR-4	4253579
YP_735137.1	CDS	Shewmr4_3009	NC_008321.1	3595360	3595896	D	KEGG: son:SO3597 hypothetical protein; hypothetical protein	3595360..3595896	Shewanella sp. MR-4	4253580
YP_735138.1	CDS	Shewmr4_3010	NC_008321.1	3596097	3596534	R	PFAM: transposase IS200-family protein; KEGG: vch:VCA0275 IS1004 transposase; transposase IS200-family protein	complement(3596097..3596534)	Shewanella sp. MR-4	4253581
YP_735139.1	CDS	cysM	NC_008321.1	3596727	3597605	R	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B	complement(3596727..3597605)	Shewanella sp. MR-4	4253582
YP_735140.1	CDS	Shewmr4_3012	NC_008321.1	3597813	3598820	D	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO3599 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter periplasmic sulfate-binding protein	3597813..3598820	Shewanella sp. MR-4	4253583
YP_735141.1	CDS	Shewmr4_3013	NC_008321.1	3598993	3599838	D	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO3600 sulfate ABC transporter, permease protein; sulfate ABC transporter inner membrane subunit CysT	3598993..3599838	Shewanella sp. MR-4	4253584
YP_735142.1	CDS	Shewmr4_3014	NC_008321.1	3599848	3600717	D	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO3601 sulfate ABC transporter, permease protein; sulfate ABC transporter inner membrane subunit CysW	3599848..3600717	Shewanella sp. MR-4	4253585
YP_735143.1	CDS	Shewmr4_3015	NC_008321.1	3600714	3601844	D	KEGG: son:SO3602 sulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase subunit	3600714..3601844	Shewanella sp. MR-4	4253586
YP_735144.1	CDS	Shewmr4_3016	NC_008321.1	3601968	3603113	R	PFAM: secretion protein HlyD family protein; KEGG: son:SO3603 secretion protein, HlyD family; secretion protein HlyD family protein	complement(3601968..3603113)	Shewanella sp. MR-4	4253587
YP_735145.1	CDS	Shewmr4_3017	NC_008321.1	3603115	3603531	R	KEGG: vch:VCA0048 hypothetical protein; hypothetical protein	complement(3603115..3603531)	Shewanella sp. MR-4	4253588
YP_735146.1	CDS	Shewmr4_3018	NC_008321.1	3604539	3605021	R	hypothetical protein	complement(3604539..3605021)	Shewanella sp. MR-4	4253589
YP_735147.1	CDS	Shewmr4_3019	NC_008321.1	3605219	3606784	R	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: son:SO3611 ATPase, AAA family; ATPase central domain-containing protein	complement(3605219..3606784)	Shewanella sp. MR-4	4253590
YP_735148.1	CDS	purT	NC_008321.1	3606924	3608099	D	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2	3606924..3608099	Shewanella sp. MR-4	4253591
YP_735149.1	CDS	Shewmr4_3021	NC_008321.1	3608324	3609832	D	KEGG: son:SO3614 hypothetical protein; hypothetical protein	3608324..3609832	Shewanella sp. MR-4	4253592
YP_735150.1	CDS	Shewmr4_3022	NC_008321.1	3609822	3612101	D	PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO3615 hypothetical protein; TPR repeat-containing protein	3609822..3612101	Shewanella sp. MR-4	4253593
YP_735151.1	CDS	Shewmr4_3023	NC_008321.1	3613176	3613880	D	hypothetical protein	3613176..3613880	Shewanella sp. MR-4	4253594
YP_735152.1	CDS	Shewmr4_3024	NC_008321.1	3614330	3615343	D	PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3360 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein	3614330..3615343	Shewanella sp. MR-4	4253595
YP_735153.1	CDS	Shewmr4_3025	NC_008321.1	3615803	3617959	R	KEGG: son:SO1075 hypothetical protein; dipeptidyl-peptidase 7	complement(3615803..3617959)	Shewanella sp. MR-4	4253596
YP_735154.1	CDS	Shewmr4_3026	NC_008321.1	3618198	3619373	R	PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane; KEGG: son:SO1074 tyrosine-specific transport protein, putative; aromatic amino acid permease	complement(3618198..3619373)	Shewanella sp. MR-4	4253597
YP_735155.1	CDS	Shewmr4_3027	NC_008321.1	3619931	3621406	R	GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells; N-acetylglucosamine-binding protein A	complement(3619931..3621406)	Shewanella sp. MR-4	4253598
YP_735156.1	CDS	Shewmr4_3028	NC_008321.1	3621991	3622587	D	PFAM: protein of unknown function UPF0016; KEGG: son:SO1071 hypothetical protein; hypothetical protein	3621991..3622587	Shewanella sp. MR-4	4253599
YP_735157.1	CDS	Shewmr4_3029	NC_008321.1	3622658	3624118	R	PFAM: Catalase domain protein; KEGG: son:SO1070 catalase; catalase	complement(3622658..3624118)	Shewanella sp. MR-4	4253600
YP_735158.1	CDS	Shewmr4_3030	NC_008321.1	3624478	3624723	R	KEGG: son:SO1069 hypothetical protein; hypothetical protein	complement(3624478..3624723)	Shewanella sp. MR-4	4253601
YP_735159.1	CDS	Shewmr4_3031	NC_008321.1	3624777	3625214	R	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: son:SO1068 hypothetical protein; hypothetical protein	complement(3624777..3625214)	Shewanella sp. MR-4	4253602
YP_735160.1	CDS	Shewmr4_3032	NC_008321.1	3625323	3625778	R	KEGG: son:SO1067 hypothetical protein; hypothetical protein	complement(3625323..3625778)	Shewanella sp. MR-4	4253603
YP_735161.1	CDS	Shewmr4_3033	NC_008321.1	3625905	3628517	R	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: son:SO1066 extracellular nuclease; endonuclease/exonuclease/phosphatase	complement(3625905..3628517)	Shewanella sp. MR-4	4253604
YP_735162.1	CDS	Shewmr4_3034	NC_008321.1	3629144	3629917	R	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1065 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA; peptidylprolyl isomerase, FKBP-type	complement(3629144..3629917)	Shewanella sp. MR-4	4253605
YP_735163.1	CDS	Shewmr4_3035	NC_008321.1	3630072	3631022	D	PFAM: WD-40 repeat protein; KEGG: son:SO1064 hypothetical WD domain protein; WD-40 repeat-containing protein	3630072..3631022	Shewanella sp. MR-4	4253606
YP_735164.1	CDS	Shewmr4_3036	NC_008321.1	3631032	3631244	D	PFAM: SlyX family protein; KEGG: son:SO1063 SlyX protein; SlyX family protein	3631032..3631244	Shewanella sp. MR-4	4253607
YP_735165.1	CDS	Shewmr4_3037	NC_008321.1	3631298	3631843	D	KEGG: son:SO1062 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase	3631298..3631843	Shewanella sp. MR-4	4253608
YP_735166.1	CDS	Shewmr4_3038	NC_008321.1	3631840	3633240	D	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO1061 TPR domain protein; TPR repeat-containing protein	3631840..3633240	Shewanella sp. MR-4	4253609
YP_735167.1	CDS	Shewmr4_3039	NC_008321.1	3633296	3633901	D	KEGG: son:SO1060 hypothetical protein; hypothetical protein	3633296..3633901	Shewanella sp. MR-4	4253610
YP_735168.1	CDS	Shewmr4_3040	NC_008321.1	3634143	3636776	D	TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1059 aminopeptidase N; aminopeptidase N	3634143..3636776	Shewanella sp. MR-4	4253611
YP_735169.1	CDS	Shewmr4_3041	NC_008321.1	3636834	3638390	R	PFAM: EAL domain protein; KEGG: vpa:VP1768 hypothetical protein; EAL domain-containing protein	complement(3636834..3638390)	Shewanella sp. MR-4	4253612
YP_735170.1	CDS	Shewmr4_3042	NC_008321.1	3638584	3640476	D	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: son:SO1056 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	3638584..3640476	Shewanella sp. MR-4	4253613
YP_735171.1	CDS	Shewmr4_3043	NC_008321.1	3640579	3642021	R	KEGG: son:SO1055 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase with PAS/PAC sensor	complement(3640579..3642021)	Shewanella sp. MR-4	4253614
YP_735172.1	CDS	Shewmr4_3044	NC_008321.1	3642300	3643253	D	PFAM: protein of unknown function DUF72; KEGG: son:SO1053.2 hypothetical protein; hypothetical protein	3642300..3643253	Shewanella sp. MR-4	4253615
YP_735173.1	CDS	Shewmr4_3045	NC_008321.1	3643266	3644735	R	PFAM: phosphate transporter; KEGG: son:SO1052 low-affinity inorganic phosphate transporter; phosphate transporter	complement(3643266..3644735)	Shewanella sp. MR-4	4253616
YP_735174.1	CDS	mdoD	NC_008321.1	3644930	3646744	R	involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D	complement(3644930..3646744)	Shewanella sp. MR-4	4253617
YP_735175.1	CDS	Shewmr4_3047	NC_008321.1	3646863	3648338	R	PFAM: carbon starvation protein CstA; KEGG: sdn:Sden_0907 carbon starvation protein CstA; carbon starvation protein CstA	complement(3646863..3648338)	Shewanella sp. MR-4	4253618
YP_735176.1	CDS	Shewmr4_3048	NC_008321.1	3648566	3649042	R	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1049 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	complement(3648566..3649042)	Shewanella sp. MR-4	4253619
YP_735177.1	CDS	Shewmr4_3049	NC_008321.1	3649226	3649960	R	PFAM: LrgB family protein; KEGG: son:SO1048 hypothetical protein; LrgB family protein	complement(3649226..3649960)	Shewanella sp. MR-4	4253620
YP_735178.1	CDS	Shewmr4_3050	NC_008321.1	3649960	3650394	R	PFAM: LrgA family protein; KEGG: son:SO1047 holin-like protein; LrgA family protein	complement(3649960..3650394)	Shewanella sp. MR-4	4253621
YP_735179.1	CDS	Shewmr4_3051	NC_008321.1	3650515	3651405	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1046 transcriptional regulator, LysR family; LysR family transcriptional regulator	3650515..3651405	Shewanella sp. MR-4	4253622
YP_735180.1	CDS	Shewmr4_3052	NC_008321.1	3651410	3652234	R	KEGG: son:SO1045 hypothetical protein; hypothetical protein	complement(3651410..3652234)	Shewanella sp. MR-4	4253623
YP_735181.1	CDS	Shewmr4_3053	NC_008321.1	3652609	3653343	D	PFAM: extracellular solute-binding protein, family 3; KEGG: son:SO1044 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein	3652609..3653343	Shewanella sp. MR-4	4253624
YP_735182.1	CDS	Shewmr4_3054	NC_008321.1	3653349	3654029	D	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1043 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit	3653349..3654029	Shewanella sp. MR-4	4253625
YP_735183.1	CDS	Shewmr4_3055	NC_008321.1	3654022	3654747	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1042 amino acid ABC transporter, ATP-binding protein; ABC transporter-like protein	3654022..3654747	Shewanella sp. MR-4	4253626
YP_735184.1	CDS	Shewmr4_3056	NC_008321.1	3654857	3655261	R	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: bcn:Bcen_0332 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating, GFA	complement(3654857..3655261)	Shewanella sp. MR-4	4253627
YP_735185.1	CDS	Shewmr4_3057	NC_008321.1	3655419	3655910	R	hypothetical protein	complement(3655419..3655910)	Shewanella sp. MR-4	4253628
YP_735186.1	CDS	Shewmr4_3058	NC_008321.1	3656107	3657048	D	KEGG: eca:ECA2891 hypothetical protein; nucleotide-binding protein	3656107..3657048	Shewanella sp. MR-4	4253629
YP_735187.1	CDS	Shewmr4_3059	NC_008321.1	3657393	3657854	R	KEGG: vvy:VVA1480 hypothetical protein; hypothetical protein	complement(3657393..3657854)	Shewanella sp. MR-4	4253630
YP_735188.1	CDS	Shewmr4_3060	NC_008321.1	3657863	3659818	R	PFAM: beta-lactamase domain protein; KEGG: vvy:VVA1481 alkyl sulfatase; beta-lactamase domain-containing protein	complement(3657863..3659818)	Shewanella sp. MR-4	4253631
YP_735189.1	CDS	Shewmr4_3061	NC_008321.1	3660213	3660866	D	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase	3660213..3660866	Shewanella sp. MR-4	4253632
YP_735190.1	CDS	Shewmr4_3062	NC_008321.1	3661169	3661813	D	PFAM: heat shock protein DnaJ domain protein; KEGG: son:SO3716 DnaJ domain protein; heat shock protein DnaJ domain-containing protein	3661169..3661813	Shewanella sp. MR-4	4253633
YP_735191.1	CDS	Shewmr4_3063	NC_008321.1	3662080	3662832	D	PFAM: DSBA oxidoreductase; KEGG: son:SO3718 thiol:disulfide interchange protein, DsbA family; DSBA oxidoreductase	3662080..3662832	Shewanella sp. MR-4	4253634
YP_735192.1	CDS	Shewmr4_3064	NC_008321.1	3662911	3663918	R	KEGG: vpa:VP0375 putative lipoprotein; putative lipoprotein	complement(3662911..3663918)	Shewanella sp. MR-4	4253635
YP_735193.1	CDS	Shewmr4_3065	NC_008321.1	3664186	3664713	R	KEGG: son:SO3719 hypothetical protein; hypothetical protein	complement(3664186..3664713)	Shewanella sp. MR-4	4253636
YP_735194.1	CDS	Shewmr4_3066	NC_008321.1	3664756	3665277	R	KEGG: son:SO3720 protoporphyrinogen oxidase; protoporphyrinogen oxidase	complement(3664756..3665277)	Shewanella sp. MR-4	4253637
YP_735195.1	CDS	Shewmr4_3067	NC_008321.1	3665722	3666927	D	PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_0720 major facilitator superfamily MFS_1; major facilitator transporter	3665722..3666927	Shewanella sp. MR-4	4253638
YP_735196.1	CDS	Shewmr4_3068	NC_008321.1	3667067	3667906	D	KEGG: son:SO3722 hypothetical protein; hypothetical protein	3667067..3667906	Shewanella sp. MR-4	4253639
YP_735197.1	CDS	Shewmr4_3069	NC_008321.1	3667928	3668545	R	converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase	complement(3667928..3668545)	Shewanella sp. MR-4	4253640
YP_735198.1	CDS	Shewmr4_3070	NC_008321.1	3668596	3670320	R	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sdn:Sden_0961 TrkA-C; TrkA domain-containing protein	complement(3668596..3670320)	Shewanella sp. MR-4	4253641
YP_735199.1	CDS	cysN	NC_008321.1	3670324	3671766	R	may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1	complement(3670324..3671766)	Shewanella sp. MR-4	4253642
YP_735200.1	CDS	Shewmr4_3072	NC_008321.1	3671897	3672805	R	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2	complement(3671897..3672805)	Shewanella sp. MR-4	4253643
YP_735201.1	CDS	Shewmr4_3073	NC_008321.1	3672887	3673717	R	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: son:SO3728 uroporphyrin-III C-methyltransferase; uroporphyrinogen-III C-methyltransferase	complement(3672887..3673717)	Shewanella sp. MR-4	4253644
YP_735202.1	CDS	Shewmr4_3074	NC_008321.1	3674147	3675031	D	PFAM: phospholipase A1; KEGG: sdn:Sden_0955 phospholipase A1; phospholipase A(1)	3674147..3675031	Shewanella sp. MR-4	4253645
YP_735203.1	CDS	Shewmr4_3075	NC_008321.1	3675219	3676766	D	KEGG: son:SO3731 hypothetical protein; hypothetical protein	3675219..3676766	Shewanella sp. MR-4	4253646
YP_735204.1	CDS	Shewmr4_3076	NC_008321.1	3676821	3678557	R	KEGG: son:SO3733 hypothetical protein; hypothetical protein	complement(3676821..3678557)	Shewanella sp. MR-4	4253647
YP_735205.1	CDS	mtgA	NC_008321.1	3678923	3679708	R	glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase	complement(3678923..3679708)	Shewanella sp. MR-4	4253648
YP_735206.1	CDS	Shewmr4_3078	NC_008321.1	3680385	3681182	R	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase	complement(3680385..3681182)	Shewanella sp. MR-4	4253649
YP_735207.1	CDS	Shewmr4_3079	NC_008321.1	3681175	3682872	R	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta	complement(3681175..3682872)	Shewanella sp. MR-4	4253650
YP_735208.1	CDS	Shewmr4_3080	NC_008321.1	3682947	3684761	R	TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: son:SO3738 sulfite reductase (NADPH) flavoprotein alpha-component; sulfite reductase (NADPH) subunit alpha	complement(3682947..3684761)	Shewanella sp. MR-4	4253651
YP_735209.1	CDS	pntA	NC_008321.1	3685179	3686705	D	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha	3685179..3686705	Shewanella sp. MR-4	4253652
YP_735210.1	CDS	pntB	NC_008321.1	3686717	3688201	D	catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase	3686717..3688201	Shewanella sp. MR-4	4253653
YP_735211.1	CDS	Shewmr4_3083	NC_008321.1	3688356	3688745	D	KEGG: son:SO3741.1 hypothetical protein; hypothetical protein	3688356..3688745	Shewanella sp. MR-4	4253654
YP_735212.1	CDS	Shewmr4_3084	NC_008321.1	3688834	3689313	R	PFAM: regulatory protein, TetR; KEGG: son:SO3743 transcriptional regulator, TetR family; TetR family transcriptional regulator	complement(3688834..3689313)	Shewanella sp. MR-4	4253655
YP_735213.1	CDS	Shewmr4_3085	NC_008321.1	3689467	3690294	R	KEGG: son:SO3744 hypothetical protein; hypothetical protein	complement(3689467..3690294)	Shewanella sp. MR-4	4253656
YP_735214.1	CDS	Shewmr4_3086	NC_008321.1	3690291	3691721	R	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase	complement(3690291..3691721)	Shewanella sp. MR-4	4253657
YP_735215.1	CDS	Shewmr4_3087	NC_008321.1	3691824	3692750	D	TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: son:SO3746 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase	3691824..3692750	Shewanella sp. MR-4	4253658
YP_735216.1	CDS	Shewmr4_3088	NC_008321.1	3692917	3694641	R	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter	complement(3692917..3694641)	Shewanella sp. MR-4	4253659
YP_735217.1	CDS	Shewmr4_3089	NC_008321.1	3695264	3697549	D	KEGG: rfr:Rfer_1886 putative nitric oxide reductase (subunit B) transmembrane protein; putative nitric oxide reductase (subunit B) transmembrane protein	3695264..3697549	Shewanella sp. MR-4	4253660
YP_735218.1	CDS	Shewmr4_3090	NC_008321.1	3697743	3699299	D	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcription regulator	3697743..3699299	Shewanella sp. MR-4	4253661
YP_735219.1	CDS	Shewmr4_3091	NC_008321.1	3699471	3700385	D	PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: son:SO3748 LysM domain protein; ErfK/YbiS/YcfS/YnhG family protein	3699471..3700385	Shewanella sp. MR-4	4253662
YP_735220.1	CDS	Shewmr4_3092	NC_008321.1	3700483	3701310	R	KEGG: son:SO3749 hypothetical protein; hypothetical protein	complement(3700483..3701310)	Shewanella sp. MR-4	4253663
YP_735221.1	CDS	Shewmr4_3093	NC_008321.1	3701473	3702888	D	PFAM: peptidase M16 domain protein; KEGG: gvi:glr3686 probable peptidase; peptidase M16 domain-containing protein	3701473..3702888	Shewanella sp. MR-4	4253664
YP_735222.1	CDS	Shewmr4_3094	NC_008321.1	3702885	3704420	D	PFAM: peptidase M16 domain protein; KEGG: son:SO3751 hypothetical protein; peptidase M16 domain-containing protein	3702885..3704420	Shewanella sp. MR-4	4253665
YP_735223.1	CDS	Shewmr4_3095	NC_008321.1	3704455	3705135	R	PFAM: response regulator receiver; KEGG: vpa:VP1711 response regulator; response regulator receiver/unknown domain-containing protein	complement(3704455..3705135)	Shewanella sp. MR-4	4253666
YP_735224.1	CDS	Shewmr4_3096	NC_008321.1	3705135	3706748	R	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bld:BLi01245 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism	complement(3705135..3706748)	Shewanella sp. MR-4	4253667
YP_735225.1	CDS	Shewmr4_3097	NC_008321.1	3706764	3708284	R	PFAM: protein of unknown function DUF112, transmembrane; KEGG: vpa:VP1653 putative tricarboxylic transport TctA; hypothetical protein	complement(3706764..3708284)	Shewanella sp. MR-4	4253668
YP_735226.1	CDS	Shewmr4_3098	NC_008321.1	3708287	3708754	R	KEGG: vvy:VV1523 putative tricarboxylic transport membrane protein; putative tricarboxylic transport membrane protein	complement(3708287..3708754)	Shewanella sp. MR-4	4253669
YP_735227.1	CDS	Shewmr4_3099	NC_008321.1	3708765	3709718	R	PFAM: Uncharacterized protein UPF0065; KEGG: vpa:VP1651 putative tricarboxylic transport TctC; hypothetical protein	complement(3708765..3709718)	Shewanella sp. MR-4	4253670
YP_735228.1	CDS	Shewmr4_3100	NC_008321.1	3709731	3711011	R	PFAM: phosphate-selective porin O and P; KEGG: pae:PA3279 outer membrane porin OprP precursor; phosphate-selective porin O and P	complement(3709731..3711011)	Shewanella sp. MR-4	4253671
YP_735229.1	CDS	Shewmr4_3101	NC_008321.1	3711588	3712376	R	PFAM: protein of unknown function DUF583; KEGG: sdn:Sden_0706 protein of unknown function DUF583; hypothetical protein	complement(3711588..3712376)	Shewanella sp. MR-4	4253672
YP_735230.1	CDS	Shewmr4_3102	NC_008321.1	3712605	3713807	D	PFAM: AFG1-family ATPase; KEGG: son:SO3756 hypothetical ATPase; AFG1 family ATPase	3712605..3713807	Shewanella sp. MR-4	4253673
YP_735231.1	CDS	Shewmr4_3103	NC_008321.1	3713857	3714294	D	PFAM: regulatory protein, MerR; KEGG: vpa:VPA1563 putative transcriptional regulator; MerR family transcriptional regulator	3713857..3714294	Shewanella sp. MR-4	4253674
YP_735232.1	CDS	Shewmr4_3104	NC_008321.1	3714532	3715467	D	PFAM: NAD-dependent epimerase/dehydratase; KEGG: vpa:VPA1564 hypothetical protein; NAD-dependent epimerase/dehydratase	3714532..3715467	Shewanella sp. MR-4	4253675
YP_735233.1	CDS	Shewmr4_3105	NC_008321.1	3715566	3716189	R	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vvu:VV12509 putative threonine efflux protein; lysine exporter protein LysE/YggA	complement(3715566..3716189)	Shewanella sp. MR-4	4253676
YP_735234.1	CDS	Shewmr4_3106	NC_008321.1	3716265	3717242	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3757 rubisco operon transcriptional regulator; LysR family transcriptional regulator	complement(3716265..3717242)	Shewanella sp. MR-4	4253677
YP_735235.1	CDS	Shewmr4_3107	NC_008321.1	3717379	3718338	D	PFAM: protein of unknown function DUF897; KEGG: son:SO3758 hypothetical protein; hypothetical protein	3717379..3718338	Shewanella sp. MR-4	4253678
YP_735236.1	CDS	Shewmr4_3108	NC_008321.1	3718420	3719391	R	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: son:SO3759 GGDEF domain protein; diguanylate cyclase with GAF sensor	complement(3718420..3719391)	Shewanella sp. MR-4	4253679
YP_735237.1	CDS	Shewmr4_3109	NC_008321.1	3719451	3722315	R	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase	complement(3719451..3722315)	Shewanella sp. MR-4	4253680
YP_735238.1	CDS	Shewmr4_3110	NC_008321.1	3722567	3723544	D	KEGG: son:SO3761 hypothetical protein; hypothetical protein	3722567..3723544	Shewanella sp. MR-4	4253681
YP_735239.1	CDS	Shewmr4_3111	NC_008321.1	3723560	3724459	D	PFAM: protein of unknown function DUF350; KEGG: son:SO3762 hypothetical protein; hypothetical protein	3723560..3724459	Shewanella sp. MR-4	4253682
YP_735240.1	CDS	Shewmr4_3112	NC_008321.1	3724464	3726197	D	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase	3724464..3726197	Shewanella sp. MR-4	4253683
YP_735241.1	CDS	Shewmr4_3113	NC_008321.1	3726276	3726689	D	KEGG: son:SO3764 hypothetical protein; hypothetical protein	3726276..3726689	Shewanella sp. MR-4	4253684
YP_735242.1	CDS	Shewmr4_3114	NC_008321.1	3726702	3727391	D	PFAM: PspA/IM30 family protein; KEGG: son:SO3765 hypothetical protein; phage shock protein A, PspA	3726702..3727391	Shewanella sp. MR-4	4253685
YP_735243.1	CDS	Shewmr4_3115	NC_008321.1	3727539	3728192	D	KEGG: son:SO3766 hypothetical protein; hypothetical protein	3727539..3728192	Shewanella sp. MR-4	4253686
YP_735244.1	CDS	Shewmr4_3116	NC_008321.1	3728300	3728629	D	KEGG: son:SO3767 hypothetical protein; hypothetical protein	3728300..3728629	Shewanella sp. MR-4	4253687
YP_735245.1	CDS	Shewmr4_3117	NC_008321.1	3728765	3729589	D	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: son:SO3768 ion transporter; Ion transport 2 domain-containing protein	3728765..3729589	Shewanella sp. MR-4	4253688
YP_735246.1	CDS	Shewmr4_3118	NC_008321.1	3729628	3731139	R	PFAM: adenylate cyclase; KEGG: son:SO3769 hypothetical protein; adenylate cyclase	complement(3729628..3731139)	Shewanella sp. MR-4	4253689
YP_735247.1	CDS	Shewmr4_3119	NC_008321.1	3731371	3732051	D	PFAM: protein of unknown function DUF47; KEGG: son:SO3770 conserved hypothetical protein TIGR00153; hypothetical protein	3731371..3732051	Shewanella sp. MR-4	4253690
YP_735248.1	CDS	Shewmr4_3120	NC_008321.1	3732077	3733366	D	PFAM: phosphate transporter; KEGG: son:SO3771 phosphate transporter, putative; phosphate transporter	3732077..3733366	Shewanella sp. MR-4	4253691
YP_735249.1	CDS	Shewmr4_3121	NC_008321.1	3733559	3734107	D	SMART: SH3 domain protein domain protein; KEGG: son:SO3772 SH3 domain protein; SH3 domain-containing protein	3733559..3734107	Shewanella sp. MR-4	4253692
YP_735250.1	CDS	Shewmr4_3122	NC_008321.1	3734367	3737561	D	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase	3734367..3737561	Shewanella sp. MR-4	4253693
YP_735251.1	CDS	Shewmr4_3123	NC_008321.1	3738569	3739303	D	PFAM: protein of unknown function DUF599; KEGG: son:SO3776 hypothetical protein; hypothetical protein	3738569..3739303	Shewanella sp. MR-4	4253694
YP_735252.1	CDS	Shewmr4_3124	NC_008321.1	3739398	3739577	D	TIGRFAM: DNA binding domain, excisionase family; KEGG: son:SO3777 hypothetical protein; DNA binding domain-containing protein	3739398..3739577	Shewanella sp. MR-4	4253695
YP_735253.1	CDS	Shewmr4_3125	NC_008321.1	3739629	3740243	R	TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: son:SO3778 adenylate cyclase CyaB, putative; putative adenylyl cyclase CyaB	complement(3739629..3740243)	Shewanella sp. MR-4	4253696
YP_735254.1	CDS	Shewmr4_3126	NC_008321.1	3740296	3742047	R	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding component	complement(3740296..3742047)	Shewanella sp. MR-4	4253697
YP_735255.1	CDS	Shewmr4_3127	NC_008321.1	3742044	3743999	R	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding component	complement(3742044..3743999)	Shewanella sp. MR-4	4253698
YP_735256.1	CDS	Shewmr4_3128	NC_008321.1	3744247	3745293	R	KEGG: son:SO3782 hypothetical protein; hypothetical protein	complement(3744247..3745293)	Shewanella sp. MR-4	4253699
YP_735257.1	CDS	Shewmr4_3129	NC_008321.1	3745689	3747338	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO3783 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase domain-containing protein	3745689..3747338	Shewanella sp. MR-4	4253700
YP_735258.1	CDS	Shewmr4_3130	NC_008321.1	3747448	3749148	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: vch:VC1405 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3747448..3749148)	Shewanella sp. MR-4	4253701
YP_735259.1	CDS	Shewmr4_3131	NC_008321.1	3749418	3750665	D	TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO3789 aminotransferase, class V; cysteine desulfurase	3749418..3750665	Shewanella sp. MR-4	4253702
YP_735260.1	CDS	Shewmr4_3132	NC_008321.1	3750733	3751176	D	PFAM: Fe-S metabolism associated SufE; KEGG: son:SO3790 hypothetical protein; Fe-S metabolism associated SufE	3750733..3751176	Shewanella sp. MR-4	4253703
YP_735261.1	CDS	Shewmr4_3133	NC_008321.1	3751287	3752450	D	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: peptidase M19, renal dipeptidase; KEGG: son:SO3791 renal dipeptidase family protein; twin-arginine translocation pathway signal	3751287..3752450	Shewanella sp. MR-4	4253704
YP_735262.1	CDS	Shewmr4_3134	NC_008321.1	3752510	3753682	D	KEGG: son:SO3792 hypothetical protein; hypothetical protein	3752510..3753682	Shewanella sp. MR-4	4253705
YP_735263.1	CDS	Shewmr4_3135	NC_008321.1	3753707	3754036	R	PFAM: Cupin 2, conserved barrel domain protein; KEGG: son:SO3793 hypothetical protein; cupin 2 domain-containing protein	complement(3753707..3754036)	Shewanella sp. MR-4	4253706
YP_735264.1	CDS	Shewmr4_3136	NC_008321.1	3754183	3756450	D	KEGG: son:SO3794 hypothetical protein; hypothetical protein	3754183..3756450	Shewanella sp. MR-4	4253707
YP_735265.1	CDS	Shewmr4_3137	NC_008321.1	3756513	3756887	R	PFAM: protein of unknown function DUF1696; KEGG: son:SO3796 hypothetical protein; hypothetical protein	complement(3756513..3756887)	Shewanella sp. MR-4	4253708
YP_735266.1	CDS	Shewmr4_3138	NC_008321.1	3757029	3758945	R	PFAM: peptidase U32; KEGG: son:SO3797 peptidase, U32 family; peptidase U32	complement(3757029..3758945)	Shewanella sp. MR-4	4253709
YP_735267.1	CDS	Shewmr4_3139	NC_008321.1	3759133	3759810	D	PFAM: pseudouridine synthase; KEGG: sdn:Sden_3048 pseudouridylate synthase; ribosomal large subunit pseudouridine synthase A	3759133..3759810	Shewanella sp. MR-4	4253710
YP_735268.1	CDS	Shewmr4_3140	NC_008321.1	3759873	3760367	D	transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC	3759873..3760367	Shewanella sp. MR-4	4253711
YP_735269.1	CDS	Shewmr4_3141	NC_008321.1	3760573	3764754	D	PFAM: protease-associated PA domain protein; KEGG: ade:Adeh_2937 protease-associated PA; protease domain-containing protein	3760573..3764754	Shewanella sp. MR-4	4253712
YP_735270.1	CDS	Shewmr4_3142	NC_008321.1	3764830	3765333	R	hypothetical protein	complement(3764830..3765333)	Shewanella sp. MR-4	4253713
YP_735271.1	CDS	Shewmr4_3143	NC_008321.1	3765478	3766248	R	PFAM: ABC-2 type transporter; KEGG: son:SO3801 ABC transporter, permease protein; ABC-2 type transporter	complement(3765478..3766248)	Shewanella sp. MR-4	4253714
YP_735272.1	CDS	Shewmr4_3144	NC_008321.1	3766245	3767183	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3802 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(3766245..3767183)	Shewanella sp. MR-4	4253715
YP_735273.1	CDS	Shewmr4_3145	NC_008321.1	3767411	3767941	R	KEGG: son:SO3803 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase	complement(3767411..3767941)	Shewanella sp. MR-4	4253716
YP_735274.1	CDS	Shewmr4_3146	NC_008321.1	3767949	3768608	R	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: son:SO3804 phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative; aromatic acid decarboxylase	complement(3767949..3768608)	Shewanella sp. MR-4	4253717
YP_735275.1	CDS	Shewmr4_3147	NC_008321.1	3768610	3770007	R	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: son:SO3805 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; UDP-N-acetylmuramate	complement(3768610..3770007)	Shewanella sp. MR-4	4253718
YP_735276.1	CDS	Shewmr4_3148	NC_008321.1	3770179	3770811	R	KEGG: cps:CPS_1725 hypothetical protein; hypothetical protein	complement(3770179..3770811)	Shewanella sp. MR-4	4253719
YP_735277.1	CDS	Shewmr4_3149	NC_008321.1	3771009	3771872	R	KEGG: son:SO3807 sterol desaturase family protein; sterol desaturase family protein	complement(3771009..3771872)	Shewanella sp. MR-4	4253720
YP_735278.1	CDS	Shewmr4_3150	NC_008321.1	3771917	3772948	R	KEGG: son:SO3808 hypothetical protein; hypothetical protein	complement(3771917..3772948)	Shewanella sp. MR-4	4253721
YP_735279.1	CDS	Shewmr4_3151	NC_008321.1	3773203	3773706	R	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: son:SO3810 OmpA-like transmembrane domain protein; OmpA domain-containing protein	complement(3773203..3773706)	Shewanella sp. MR-4	4253722
YP_735280.1	CDS	Shewmr4_3152	NC_008321.1	3773891	3774469	D	PFAM: Uncharacterized lipoprotein; KEGG: son:SO3811 lipoprotein, putative; hypothetical protein	3773891..3774469	Shewanella sp. MR-4	4253723
YP_735281.1	CDS	Shewmr4_3153	NC_008321.1	3774503	3775090	D	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO3812 peptidyl-prolyl cis-trans isomerase A; peptidyl-prolyl cis-trans isomerase, cyclophilin type	3774503..3775090	Shewanella sp. MR-4	4253724
YP_735282.1	CDS	Shewmr4_3154	NC_008321.1	3775160	3775480	D	KEGG: son:SO3813 hypothetical protein; hypothetical protein	3775160..3775480	Shewanella sp. MR-4	4253725
YP_735283.1	CDS	Shewmr4_3155	NC_008321.1	3775630	3777027	D	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3814 AmpG protein, putative; major facilitator transporter	3775630..3777027	Shewanella sp. MR-4	4253726
YP_735284.1	CDS	Shewmr4_3156	NC_008321.1	3777118	3777603	R	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein	complement(3777118..3777603)	Shewanella sp. MR-4	4253727
YP_735285.1	CDS	Shewmr4_3157	NC_008321.1	3777766	3778128	D	PFAM: VanZ family protein; KEGG: son:SO3816 hypothetical protein; VanZ family protein	3777766..3778128	Shewanella sp. MR-4	4253728
YP_735286.1	CDS	Shewmr4_3158	NC_008321.1	3778128	3779108	D	KEGG: son:SO3817 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase	3778128..3779108	Shewanella sp. MR-4	4253729
YP_735287.1	CDS	Shewmr4_3159	NC_008321.1	3779404	3779742	D	PFAM: nitrogen regulatory protein P-II; KEGG: son:SO3819 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II	3779404..3779742	Shewanella sp. MR-4	4253730
YP_735288.1	CDS	Shewmr4_3160	NC_008321.1	3779739	3781139	D	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cps:CPS_3995 ammonium transporter; ammonium transporter	3779739..3781139	Shewanella sp. MR-4	4253731
YP_735289.1	CDS	Shewmr4_3162	NC_008321.1	3781439	3782311	R	KEGG: son:SO3822 hypothetical protein; hypothetical protein	complement(3781439..3782311)	Shewanella sp. MR-4	4253732
YP_735290.1	CDS	Shewmr4_3163	NC_008321.1	3782476	3783324	R	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase	complement(3782476..3783324)	Shewanella sp. MR-4	4253733
YP_735291.1	CDS	Shewmr4_3164	NC_008321.1	3783382	3784629	R	PFAM: protein of unknown function DUF819; KEGG: son:SO3828 hypothetical protein; hypothetical protein	complement(3783382..3784629)	Shewanella sp. MR-4	4253734
YP_735292.1	CDS	Shewmr4_3165	NC_008321.1	3784774	3785562	R	KEGG: son:SO3829 hypothetical protein; hypothetical protein	complement(3784774..3785562)	Shewanella sp. MR-4	4253735
YP_735293.1	CDS	Shewmr4_3166	NC_008321.1	3785562	3785957	R	PFAM: Invasion gene expression up-regulator, SirB; KEGG: son:SO3830 hypothetical protein; invasion gene expression up-regulator, SirB	complement(3785562..3785957)	Shewanella sp. MR-4	4253736
YP_735294.1	CDS	Shewmr4_3167	NC_008321.1	3786076	3786489	D	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3831 acetyltransferase, GNAT family; GCN5-related N-acetyltransferase	3786076..3786489	Shewanella sp. MR-4	4253737
YP_735295.1	CDS	Shewmr4_3168	NC_008321.1	3786635	3787495	R	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: son:SO3832 hemK family protein; HemK family modification methylase	complement(3786635..3787495)	Shewanella sp. MR-4	4253738
YP_735296.1	CDS	prfA	NC_008321.1	3787498	3788589	R	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1	complement(3787498..3788589)	Shewanella sp. MR-4	4253739
YP_735297.1	CDS	hemA	NC_008321.1	3788604	3789854	R	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase	complement(3788604..3789854)	Shewanella sp. MR-4	4253740
YP_735298.1	CDS	Shewmr4_3171	NC_008321.1	3790109	3790753	D	TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; KEGG: son:SO3835 outer membrane lipoprotein LolB; outer membrane lipoprotein LolB	3790109..3790753	Shewanella sp. MR-4	4253741
YP_735299.1	CDS	ipk	NC_008321.1	3790755	3791609	D	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	3790755..3791609	Shewanella sp. MR-4	4253742
YP_735300.1	CDS	Shewmr4_3173	NC_008321.1	3791722	3792669	D	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase	3791722..3792669	Shewanella sp. MR-4	4253743
YP_735301.1	CDS	Shewmr4_3174	NC_008321.1	3792855	3794717	R	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3838 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3792855..3794717)	Shewanella sp. MR-4	4253744
YP_735302.1	CDS	Shewmr4_3175	NC_008321.1	3795118	3795651	D	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO3840 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor	3795118..3795651	Shewanella sp. MR-4	4253745
YP_735303.1	CDS	Shewmr4_3176	NC_008321.1	3795651	3796226	D	KEGG: son:SO3841 hypothetical protein; hypothetical protein	3795651..3796226	Shewanella sp. MR-4	4253746
YP_735304.1	CDS	Shewmr4_3177	NC_008321.1	3796223	3797179	D	KEGG: son:SO3842 hypothetical protein; hypothetical protein	3796223..3797179	Shewanella sp. MR-4	4253747
YP_735305.1	CDS	Shewmr4_3178	NC_008321.1	3797265	3797972	R	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_1090 pseudouridine synthase, Rsu; ribosomal small subunit pseudouridine synthase A	complement(3797265..3797972)	Shewanella sp. MR-4	4253748
YP_735306.1	CDS	Shewmr4_3179	NC_008321.1	3798311	3800395	D	PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO3844 peptidase, M13 family; endothelin-converting protein 1	3798311..3800395	Shewanella sp. MR-4	4253749
YP_735307.1	CDS	Shewmr4_3180	NC_008321.1	3800593	3801378	D	KEGG: son:SO3846 hypothetical protein; hypothetical protein	3800593..3801378	Shewanella sp. MR-4	4253750
YP_735308.1	CDS	Shewmr4_3181	NC_008321.1	3801627	3802034	D	KEGG: son:SO3847 hypothetical protein; hypothetical protein	3801627..3802034	Shewanella sp. MR-4	4253751
YP_735309.1	CDS	Shewmr4_3182	NC_008321.1	3802076	3802576	D	KEGG: son:SO3848 hypothetical protein; hypothetical protein	3802076..3802576	Shewanella sp. MR-4	4253752
YP_735310.1	CDS	Shewmr4_3183	NC_008321.1	3802648	3803277	R	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: sdn:Sden_0739 glutathione S-transferase-like protein; glutathione S-transferase domain-containing protein	complement(3802648..3803277)	Shewanella sp. MR-4	4253753
YP_735311.1	CDS	Shewmr4_3184	NC_008321.1	3803397	3805982	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sdn:Sden_0738 TonB-dependent receptor; TonB-dependent receptor	complement(3803397..3805982)	Shewanella sp. MR-4	4253754
YP_735312.1	CDS	Shewmr4_3185	NC_008321.1	3806182	3806724	D	PFAM: membrane-flanked domain; KEGG: son:SO3849 hypothetical protein; membrane-flanked domain-containing protein	3806182..3806724	Shewanella sp. MR-4	4253755
YP_735313.1	CDS	Shewmr4_3186	NC_008321.1	3806808	3808094	D	KEGG: vpa:VP2681 putative manganese transporter; putative manganese transporter	3806808..3808094	Shewanella sp. MR-4	4253756
YP_735314.1	CDS	Shewmr4_3187	NC_008321.1	3808240	3808710	D	PFAM: protein of unknown function DUF1456; KEGG: son:SO3852 hypothetical protein; hypothetical protein	3808240..3808710	Shewanella sp. MR-4	4253757
YP_735315.1	CDS	Shewmr4_3188	NC_008321.1	3808979	3810667	D	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase	3808979..3810667	Shewanella sp. MR-4	4253758
YP_735316.1	CDS	Shewmr4_3189	NC_008321.1	3810736	3811170	R	KEGG: son:SO3856 hypothetical protein; hypothetical protein	complement(3810736..3811170)	Shewanella sp. MR-4	4253759
YP_735317.1	CDS	Shewmr4_3190	NC_008321.1	3811195	3811722	R	PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO3857 PAP2 family protein; phosphoesterase, PA-phosphatase related	complement(3811195..3811722)	Shewanella sp. MR-4	4253760
YP_735318.1	CDS	Shewmr4_3191	NC_008321.1	3811837	3813777	D	KEGG: son:SO3859 cyclic nucleotide phosphodiesterase, putative; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; diguanylate cyclase	3811837..3813777	Shewanella sp. MR-4	4253761
YP_735319.1	CDS	Shewmr4_3192	NC_008321.1	3813779	3814576	R	SMART: extracellular solute-binding protein, family 3; KEGG: son:SO3860 hypothetical protein; extracellular solute-binding protein	complement(3813779..3814576)	Shewanella sp. MR-4	4253762
YP_735320.1	CDS	Shewmr4_3193	NC_008321.1	3814741	3815922	D	TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: son:SO3861 iron-sulfur cluster-binding protein; putative iron-sulfur cluster binding protein	3814741..3815922	Shewanella sp. MR-4	4253763
YP_735321.1	CDS	Shewmr4_3194	NC_008321.1	3815940	3816719	R	TIGRFAM: molybdate transport repressor, ModE; Molybdenum-pterin binding; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: son:SO3862 molybdenum transport regulatory protein ModE; ModE family transcriptional regulator	complement(3815940..3816719)	Shewanella sp. MR-4	4253764
YP_735322.1	CDS	Shewmr4_3195	NC_008321.1	3816922	3817707	D	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO3863 molybdenum ABC transporter, periplasmic molybdenum-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein	3816922..3817707	Shewanella sp. MR-4	4253765
YP_735323.1	CDS	modB	NC_008321.1	3817707	3818444	D	part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease	3817707..3818444	Shewanella sp. MR-4	4253766
YP_735324.1	CDS	modC	NC_008321.1	3818438	3819523	D	Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein	3818438..3819523	Shewanella sp. MR-4	4253767
YP_735325.1	CDS	Shewmr4_3198	NC_008321.1	3819576	3821021	D	PFAM: phage integrase family protein; KEGG: son:SO3866 site-specific recombinase, phage integrase family; phage integrase family protein	3819576..3821021	Shewanella sp. MR-4	4253768
YP_735326.1	CDS	Shewmr4_3199	NC_008321.1	3821086	3821418	D	hypothetical protein	3821086..3821418	Shewanella sp. MR-4	4253769
YP_735327.1	CDS	Shewmr4_3200	NC_008321.1	3821495	3821755	D	hypothetical protein	3821495..3821755	Shewanella sp. MR-4	4253770
YP_735328.1	CDS	Shewmr4_3201	NC_008321.1	3821825	3822061	R	PFAM: helix-turn-helix domain protein; KEGG: ngo:NGO0797 putative transcriptional regulator; XRE family transcriptional regulator	complement(3821825..3822061)	Shewanella sp. MR-4	4253771
YP_735329.1	CDS	Shewmr4_3202	NC_008321.1	3822348	3823601	D	KEGG: bfr:BF3681 C-5 cytosine-specific DNA-methylase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase	3822348..3823601	Shewanella sp. MR-4	4253772
YP_735330.1	CDS	Shewmr4_3203	NC_008321.1	3823637	3824524	R	KEGG: bld:BLi00747 hypothetical protein; hypothetical protein	complement(3823637..3824524)	Shewanella sp. MR-4	4253773
YP_735331.1	CDS	Shewmr4_3204	NC_008321.1	3824791	3825630	R	PFAM: Integrase, catalytic region; KEGG: son:SOA0129 transposase, IS3 family; integrase catalytic subunit	complement(3824791..3825630)	Shewanella sp. MR-4	4253774
YP_735332.1	CDS	Shewmr4_3206	NC_008321.1	3826237	3827889	D	KEGG: cpe:CPE1290 hypothetical protein; hypothetical protein	3826237..3827889	Shewanella sp. MR-4	4253775
YP_735333.1	CDS	Shewmr4_3207	NC_008321.1	3827889	3829388	D	KEGG: cpe:CPE1289 hypothetical protein; hypothetical protein	3827889..3829388	Shewanella sp. MR-4	4253776
YP_735334.1	CDS	Shewmr4_3208	NC_008321.1	3829637	3831271	D	PFAM: SEC-C motif domain protein; Sel1 domain protein repeat-containing protein; KEGG: pcr:Pcryo_2230 Sel1; SecC motif-containing protein	3829637..3831271	Shewanella sp. MR-4	4253777
YP_735335.1	CDS	Shewmr4_3209	NC_008321.1	3832025	3837088	R	PFAM: AAA-4 family protein; peptidase C14, caspase catalytic subunit p20; KEGG: rpd:RPD_2288 hypothetical protein; putative transcriptional regulator	complement(3832025..3837088)	Shewanella sp. MR-4	4253778
YP_735336.1	CDS	Shewmr4_3210	NC_008321.1	3837529	3838785	R	PFAM: UMUC domain protein DNA-repair protein; KEGG: sdn:Sden_3235 DNA-directed DNA polymerase; DNA-directed DNA polymerase	complement(3837529..3838785)	Shewanella sp. MR-4	4253779
YP_735337.1	CDS	Shewmr4_3212	NC_008321.1	3839650	3840126	R	KEGG: csa:Csal_2379 hypothetical protein; hypothetical protein	complement(3839650..3840126)	Shewanella sp. MR-4	4253780
YP_735338.1	CDS	Shewmr4_3213	NC_008321.1	3840144	3840455	R	hypothetical protein	complement(3840144..3840455)	Shewanella sp. MR-4	4253781
YP_735339.1	CDS	Shewmr4_3214	NC_008321.1	3840459	3840818	R	hypothetical protein	complement(3840459..3840818)	Shewanella sp. MR-4	4253782
YP_735340.1	CDS	Shewmr4_3215	NC_008321.1	3840873	3842117	R	hypothetical protein	complement(3840873..3842117)	Shewanella sp. MR-4	4253783
YP_735341.1	CDS	Shewmr4_3216	NC_008321.1	3842291	3844258	R	KEGG: bme:BMEI1696 hypothetical membrane spanning protein; hypothetical protein	complement(3842291..3844258)	Shewanella sp. MR-4	4253784
YP_735342.1	CDS	Shewmr4_3217	NC_008321.1	3844772	3845476	D	hypothetical protein	3844772..3845476	Shewanella sp. MR-4	4253785
YP_735343.1	CDS	Shewmr4_3218	NC_008321.1	3845629	3846561	D	PFAM: phage integrase family protein; KEGG: son:SO3884 site-specific recombinase, phage integrase family; phage integrase family protein	3845629..3846561	Shewanella sp. MR-4	4253786
YP_735344.1	CDS	Shewmr4_3219	NC_008321.1	3846555	3848597	D	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: son:SO3885 ATPase, AAA family; ATPase central domain-containing protein	3846555..3848597	Shewanella sp. MR-4	4253787
YP_735345.1	CDS	Shewmr4_3220	NC_008321.1	3848620	3849108	D	KEGG: son:SO3886 hypothetical protein; hypothetical protein	3848620..3849108	Shewanella sp. MR-4	4253788
YP_735346.1	CDS	Shewmr4_3221	NC_008321.1	3849190	3849594	D	KEGG: son:SO3887 hypothetical protein; hypothetical protein	3849190..3849594	Shewanella sp. MR-4	4253789
YP_735347.1	CDS	Shewmr4_3222	NC_008321.1	3849724	3850056	D	PFAM: protein of unknown function DUF1508; KEGG: son:SO3888 hypothetical protein; hypothetical protein	3849724..3850056	Shewanella sp. MR-4	4253790
YP_735348.1	CDS	Shewmr4_3223	NC_008321.1	3850581	3852170	R	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; KEGG: son:SO3890 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(3850581..3852170)	Shewanella sp. MR-4	4253791
YP_735349.1	CDS	Shewmr4_3224	NC_008321.1	3852732	3853343	R	KEGG: son:SO3892 hypothetical protein; hypothetical protein	complement(3852732..3853343)	Shewanella sp. MR-4	4253792
YP_735350.1	CDS	Shewmr4_3225	NC_008321.1	3853511	3855142	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3894 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	3853511..3855142	Shewanella sp. MR-4	4253793
YP_735351.1	CDS	Shewmr4_3226	NC_008321.1	3855285	3856103	R	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: son:SO3895 HesA/MoeB/ThiF family protein; UBA/THIF-type NAD/FAD binding protein	complement(3855285..3856103)	Shewanella sp. MR-4	4253794
YP_735352.1	CDS	Shewmr4_3227	NC_008321.1	3856521	3857585	D	KEGG: son:SO3896 outer membrane porin, putative; outer membrane porin	3856521..3857585	Shewanella sp. MR-4	4253795
YP_735353.1	CDS	Shewmr4_3228	NC_008321.1	3858016	3859086	D	PFAM: porin, Gram-negative type; KEGG: son:SO3896 outer membrane porin, putative; porin	3858016..3859086	Shewanella sp. MR-4	4253796
YP_735354.1	CDS	Shewmr4_3229	NC_008321.1	3859248	3861524	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A	complement(3859248..3861524)	Shewanella sp. MR-4	4253797
YP_735355.1	CDS	Shewmr4_3230	NC_008321.1	3861517	3862692	R	KEGG: son:SO3898 L-sorbosone dehydrogenase, putative; L-sorbosone dehydrogenase	complement(3861517..3862692)	Shewanella sp. MR-4	4253798
YP_735356.1	CDS	Shewmr4_3231	NC_008321.1	3862745	3864631	R	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B	complement(3862745..3864631)	Shewanella sp. MR-4	4253799
YP_735357.1	CDS	Shewmr4_3232	NC_008321.1	3864688	3865263	R	PFAM: protein of unknown function UPF0227; KEGG: son:SO3900 hypothetical protein; hypothetical protein	complement(3864688..3865263)	Shewanella sp. MR-4	4253800
YP_735358.1	CDS	Shewmr4_3233	NC_008321.1	3865290	3866129	R	PFAM: metallophosphoesterase; Calcineurin phosphoesterase C-terminal domain protein; KEGG: son:SO3901 lacZ expression regulator; calcineurin phosphoesterase C-terminal domain-containing protein	complement(3865290..3866129)	Shewanella sp. MR-4	4253801
YP_735359.1	CDS	Shewmr4_3234	NC_008321.1	3866145	3866597	R	PFAM: protein of unknown function DUF1249; KEGG: son:SO3902 hypothetical protein; hypothetical protein	complement(3866145..3866597)	Shewanella sp. MR-4	4253802
YP_735360.1	CDS	Shewmr4_3235	NC_008321.1	3866590	3867201	R	KEGG: son:SO3903 ADP-ribose pyrophosphatase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase; nucleoside diphosphate pyrophosphatase	complement(3866590..3867201)	Shewanella sp. MR-4	4253803
YP_735361.1	CDS	tolC	NC_008321.1	3867445	3868752	D	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein	3867445..3868752	Shewanella sp. MR-4	4253804
YP_735362.1	CDS	Shewmr4_3237	NC_008321.1	3868825	3869520	R	KEGG: son:SO3905 hypothetical protein; hypothetical protein	complement(3868825..3869520)	Shewanella sp. MR-4	4253805
YP_735363.1	CDS	Shewmr4_3238	NC_008321.1	3869565	3870533	R	KEGG: son:SO3906 hypothetical protein; hypothetical protein	complement(3869565..3870533)	Shewanella sp. MR-4	4253806
YP_735364.1	CDS	Shewmr4_3239	NC_008321.1	3870545	3871027	R	PFAM: protein of unknown function DUF461; KEGG: son:SO3907 hypothetical protein; hypothetical protein	complement(3870545..3871027)	Shewanella sp. MR-4	4253807
YP_735365.1	CDS	Shewmr4_3240	NC_008321.1	3871062	3871799	D	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO3908 enoyl-CoA hydratase/isomerase family protein; enoyl-CoA hydratase	3871062..3871799	Shewanella sp. MR-4	4253808
YP_735366.1	CDS	Shewmr4_3241	NC_008321.1	3871937	3872137	R	PFAM: PspC domain protein; KEGG: son:SO3909 hypothetical protein; phage shock protein C, PspC	complement(3871937..3872137)	Shewanella sp. MR-4	4253809
YP_735367.1	CDS	Shewmr4_3242	NC_008321.1	3872283	3872576	R	KEGG: son:SO3910 hypothetical protein; hypothetical protein	complement(3872283..3872576)	Shewanella sp. MR-4	4253810
YP_735368.1	CDS	Shewmr4_3243	NC_008321.1	3872785	3873792	R	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: son:SO3912 TIM-barrel protein, yjbN family; tRNA-dihydrouridine synthase A	complement(3872785..3873792)	Shewanella sp. MR-4	4253811
YP_735369.1	CDS	Shewmr4_3244	NC_008321.1	3874020	3874694	R	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO3913 putative hydroxylase; putative hydroxylase	complement(3874020..3874694)	Shewanella sp. MR-4	4253812
YP_735370.1	CDS	Shewmr4_3245	NC_008321.1	3874770	3876965	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO3914 TonB-dependent receptor, putative; TonB-dependent siderophore receptor	complement(3874770..3876965)	Shewanella sp. MR-4	4253813
YP_735371.1	CDS	Shewmr4_3246	NC_008321.1	3877523	3877987	D	KEGG: son:SO3915 putative chemotaxis protein CheX; putative chemotaxis protein CheX	3877523..3877987	Shewanella sp. MR-4	4253814
YP_735372.1	CDS	alr	NC_008321.1	3878168	3879244	R	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase	complement(3878168..3879244)	Shewanella sp. MR-4	4253815
YP_735373.1	CDS	Shewmr4_3248	NC_008321.1	3879320	3880726	R	KEGG: son:SO3917 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase; primary replicative DNA helicase	complement(3879320..3880726)	Shewanella sp. MR-4	4253816
YP_735374.1	CDS	Shewmr4_3249	NC_008321.1	3880852	3883050	D	KEGG: son:SO3918 hypothetical protein; dipeptidyl-peptidase 7	3880852..3883050	Shewanella sp. MR-4	4253817
YP_735375.1	CDS	Shewmr4_3250	NC_008321.1	3883686	3884918	D	KEGG: son:SO3920 periplasmic Fe hydrogenase, large subunit; TIGRFAM: hydrogenases, Fe-only; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hydrogenase large subunit domain protein; hydrogenases, Fe-only	3883686..3884918	Shewanella sp. MR-4	4253818
YP_735376.1	CDS	Shewmr4_3251	NC_008321.1	3884931	3885251	D	PFAM: iron hydrogenase, small subunit; KEGG: son:SO3921 periplasmic Fe hydrogenase, small subunit; iron hydrogenase, small subunit	3884931..3885251	Shewanella sp. MR-4	4253819
YP_735377.1	CDS	Shewmr4_3252	NC_008321.1	3885265	3885948	D	KEGG: son:SO3922 formate dehydrogenase, putative; formate dehydrogenase subunit gamma	3885265..3885948	Shewanella sp. MR-4	4253820
YP_735378.1	CDS	thiH	NC_008321.1	3886019	3887458	D	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; in Thermotoga this enzyme has an extra C-terminal domain; thiamine biosynthesis protein ThiH	3886019..3887458	Shewanella sp. MR-4	4253821
YP_735379.1	CDS	Shewmr4_3254	NC_008321.1	3887459	3888097	D	KEGG: son:SO3924 hypothetical protein; hypothetical protein	3887459..3888097	Shewanella sp. MR-4	4253822
YP_735380.1	CDS	Shewmr4_3255	NC_008321.1	3888097	3889176	D	catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase	3888097..3889176	Shewanella sp. MR-4	4253823
YP_735381.1	CDS	Shewmr4_3256	NC_008321.1	3889160	3890398	D	TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: son:SO3926 GTP-binding protein; small GTP-binding protein	3889160..3890398	Shewanella sp. MR-4	4253824
YP_735382.1	CDS	rplI	NC_008321.1	3890562	3891014	R	in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9	complement(3890562..3891014)	Shewanella sp. MR-4	4253825
YP_735383.1	CDS	rpsR	NC_008321.1	3891051	3891278	R	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18	complement(3891051..3891278)	Shewanella sp. MR-4	4253826
YP_735384.1	CDS	Shewmr4_3259	NC_008321.1	3891290	3891580	R	binds single-stranded DNA at the primosome assembly site; primosomal replication protein N	complement(3891290..3891580)	Shewanella sp. MR-4	4253827
YP_735385.1	CDS	rpsF	NC_008321.1	3891604	3891999	R	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6	complement(3891604..3891999)	Shewanella sp. MR-4	4253828
YP_735386.1	CDS	Shewmr4_3261	NC_008321.1	3892212	3892967	D	PFAM: protein of unknown function DUF481; KEGG: son:SO3931 putative salt-induced outer membrane protein; hypothetical protein	3892212..3892967	Shewanella sp. MR-4	4253829
YP_735387.1	CDS	Shewmr4_3262	NC_008321.1	3893148	3894578	D	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3933 hypothetical protein; major facilitator transporter	3893148..3894578	Shewanella sp. MR-4	4253830
YP_735388.1	CDS	Shewmr4_3263	NC_008321.1	3894639	3895379	R	Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase	complement(3894639..3895379)	Shewanella sp. MR-4	4253831
YP_735389.1	CDS	Shewmr4_3264	NC_008321.1	3895380	3897806	R	KEGG: son:SO3935 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain protein; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; RNAse R	complement(3895380..3897806)	Shewanella sp. MR-4	4253832
YP_735390.1	CDS	Shewmr4_3265	NC_008321.1	3897846	3898502	R	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO3936 sodium-type flagellar protein MotX; Sel1 domain-containing protein	complement(3897846..3898502)	Shewanella sp. MR-4	4253833
YP_735391.1	CDS	Shewmr4_3266	NC_008321.1	3898611	3899906	R	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase	complement(3898611..3899906)	Shewanella sp. MR-4	4253834
YP_735392.1	CDS	Shewmr4_3267	NC_008321.1	3899973	3900161	R	KEGG: son:SO3938 hypothetical protein; hypothetical protein	complement(3899973..3900161)	Shewanella sp. MR-4	4253835
YP_735393.1	CDS	rpsI	NC_008321.1	3900274	3900666	R	forms a direct contact with the tRNA during translation; 30S ribosomal protein S9	complement(3900274..3900666)	Shewanella sp. MR-4	4253836
YP_735394.1	CDS	rplM	NC_008321.1	3900681	3901109	R	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13	complement(3900681..3901109)	Shewanella sp. MR-4	4253837
YP_735395.1	CDS	Shewmr4_3270	NC_008321.1	3901406	3902566	R	PFAM: AFG1-family ATPase; KEGG: son:SO3941 hypothetical protein; AFG1 family ATPase	complement(3901406..3902566)	Shewanella sp. MR-4	4253838
YP_735396.1	CDS	Shewmr4_3271	NC_008321.1	3902971	3904323	D	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: son:SO3942 serine protease, HtrA/DegQ/DegS family; peptidase Do	3902971..3904323	Shewanella sp. MR-4	4253839
YP_735397.1	CDS	Shewmr4_3272	NC_008321.1	3904449	3905531	D	TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: son:SO3943 protease DegS; DegS serine peptidase	3904449..3905531	Shewanella sp. MR-4	4253840
YP_735398.1	CDS	Shewmr4_3273	NC_008321.1	3906364	3908055	D	PFAM: protein of unknown function DUF342; KEGG: son:SO0826 hypothetical protein; hypothetical protein	3906364..3908055	Shewanella sp. MR-4	4253841
YP_735399.1	CDS	Shewmr4_3274	NC_008321.1	3908298	3908675	D	KEGG: son:SO0824 hypothetical protein; hypothetical protein	3908298..3908675	Shewanella sp. MR-4	4253842
YP_735400.1	CDS	Shewmr4_3275	NC_008321.1	3908865	3909989	D	PFAM: peptidase M50; KEGG: son:SO0823 hypothetical protein; peptidase M50	3908865..3909989	Shewanella sp. MR-4	4253843
YP_735401.1	CDS	Shewmr4_3277	NC_008321.1	3910250	3911692	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cps:CPS_0650 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(3910250..3911692)	Shewanella sp. MR-4	4253844
YP_735402.1	CDS	Shewmr4_3278	NC_008321.1	3911692	3912453	R	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sde:Sde_3703 response regulator receiver domain protein (CheY-like); two component transcriptional regulator	complement(3911692..3912453)	Shewanella sp. MR-4	4253845
YP_735403.1	CDS	Shewmr4_3279	NC_008321.1	3912514	3913224	R	KEGG: cps:CPS_0652 hypothetical protein; hypothetical protein	complement(3912514..3913224)	Shewanella sp. MR-4	4253846
YP_735404.1	CDS	Shewmr4_3280	NC_008321.1	3913236	3913937	R	KEGG: sde:Sde_3701 hypothetical protein; hypothetical protein	complement(3913236..3913937)	Shewanella sp. MR-4	4253847
YP_735405.1	CDS	Shewmr4_3281	NC_008321.1	3914391	3915317	D	TIGRFAM: esterase, PHB depolymerase family; KEGG: cps:CPS_0935 putative polyhydroxyalkanoate depolymerase; PHB depolymerase family esterase	3914391..3915317	Shewanella sp. MR-4	4253848
YP_735406.1	CDS	Shewmr4_3282	NC_008321.1	3915510	3917786	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cps:CPS_0936 TonB-dependent receptor; TonB-dependent receptor	3915510..3917786	Shewanella sp. MR-4	4253849
YP_735407.1	CDS	Shewmr4_3283	NC_008321.1	3917918	3918589	D	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: cps:CPS_0937 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator	3917918..3918589	Shewanella sp. MR-4	4253850
YP_735408.1	CDS	Shewmr4_3284	NC_008321.1	3918688	3922194	R	TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator; multi-sensor hybrid histidine kinase	complement(3918688..3922194)	Shewanella sp. MR-4	4253851
YP_735409.1	CDS	Shewmr4_3285	NC_008321.1	3922352	3923527	D	PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_0940 major facilitator family transporter; major facilitator transporter	3922352..3923527	Shewanella sp. MR-4	4253852
YP_735410.1	CDS	Shewmr4_3286	NC_008321.1	3923530	3924519	D	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: cps:CPS_0941 putative lipase; alpha/beta hydrolase domain-containing protein	3923530..3924519	Shewanella sp. MR-4	4253853
YP_735411.1	CDS	Shewmr4_3287	NC_008321.1	3924698	3926404	R	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase	complement(3924698..3926404)	Shewanella sp. MR-4	4253854
YP_735412.1	CDS	Shewmr4_3288	NC_008321.1	3926482	3927594	R	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase	complement(3926482..3927594)	Shewanella sp. MR-4	4253855
YP_735413.1	CDS	Shewmr4_3289	NC_008321.1	3927981	3930032	R	TIGRFAM: esterase, PHB depolymerase family; KEGG: bps:BPSL2073 poly(3-hydroxybutyrate) depolymerase precursor; PHB depolymerase family esterase	complement(3927981..3930032)	Shewanella sp. MR-4	4253856
YP_735414.1	CDS	Shewmr4_3290	NC_008321.1	3930187	3931065	R	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: cps:CPS_0943 D-beta-hydroxybutyrate dehydrogenase; short-chain dehydrogenase/reductase SDR	complement(3930187..3931065)	Shewanella sp. MR-4	4253857
YP_735415.1	CDS	Shewmr4_3291	NC_008321.1	3931206	3931913	D	KEGG: cps:CPS_1598 3-oxoadipate CoA-succinyl transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A	3931206..3931913	Shewanella sp. MR-4	4253858
YP_735416.1	CDS	Shewmr4_3292	NC_008321.1	3931923	3932582	D	KEGG: cps:CPS_1597 3-oxoadipate CoA-succinyl transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; butyryl-CoA:acetate CoA transferase	3931923..3932582	Shewanella sp. MR-4	4253859
YP_735417.1	CDS	Shewmr4_3293	NC_008321.1	3932776	3933210	R	hypothetical protein	complement(3932776..3933210)	Shewanella sp. MR-4	4253860
YP_735418.1	CDS	Shewmr4_3294	NC_008321.1	3933220	3933627	R	hypothetical protein	complement(3933220..3933627)	Shewanella sp. MR-4	4253861
YP_735419.1	CDS	Shewmr4_3295	NC_008321.1	3934159	3934869	R	hypothetical protein	complement(3934159..3934869)	Shewanella sp. MR-4	4253862
YP_735420.1	CDS	Shewmr4_3296	NC_008321.1	3935027	3935548	R	PFAM: methylation site containing protein; KEGG: sdn:Sden_3340 methylation; methylation site containing protein	complement(3935027..3935548)	Shewanella sp. MR-4	4253863
YP_735421.1	CDS	Shewmr4_3297	NC_008321.1	3935875	3936738	D	KEGG: ddi:DDB0220469 putative GATA-binding transcription factor; hypothetical protein	3935875..3936738	Shewanella sp. MR-4	4253864
YP_735422.1	CDS	Shewmr4_3298	NC_008321.1	3936770	3937516	D	PFAM: Abortive infection protein; KEGG: rsp:RSP_2034 possible CAAX amino terminal protease family; abortive infection protein	3936770..3937516	Shewanella sp. MR-4	4253865
YP_735423.1	CDS	Shewmr4_3299	NC_008321.1	3937616	3939886	R	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	complement(3937616..3939886)	Shewanella sp. MR-4	4253866
YP_735424.1	CDS	Shewmr4_3300	NC_008321.1	3940086	3940991	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0817 transcriptional activator protein MetR; LysR family transcriptional regulator	3940086..3940991	Shewanella sp. MR-4	4253867
YP_735425.1	CDS	Shewmr4_3301	NC_008321.1	3941051	3941779	R	KEGG: son:SO0816 hypothetical protein; putative signal transduction protein	complement(3941051..3941779)	Shewanella sp. MR-4	4253868
YP_735426.1	CDS	Shewmr4_3302	NC_008321.1	3942058	3944019	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0815 TonB-dependent receptor C-terminal domain protein; TonB-dependent siderophore receptor	complement(3942058..3944019)	Shewanella sp. MR-4	4253869
YP_735427.1	CDS	Shewmr4_3303	NC_008321.1	3944485	3945153	R	KEGG: sdn:Sden_0728 hypothetical protein; hypothetical protein	complement(3944485..3945153)	Shewanella sp. MR-4	4253870
YP_735428.1	CDS	Shewmr4_3304	NC_008321.1	3945399	3946835	R	KEGG: son:SO0813 hypothetical protein; hypothetical protein	complement(3945399..3946835)	Shewanella sp. MR-4	4253871
YP_735429.1	CDS	Shewmr4_3305	NC_008321.1	3946899	3948206	R	KEGG: son:SO0812 hypothetical protein; hypothetical protein	complement(3946899..3948206)	Shewanella sp. MR-4	4253872
YP_735430.1	CDS	rihA	NC_008321.1	3948408	3949364	D	Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1	3948408..3949364	Shewanella sp. MR-4	4253873
YP_735431.1	CDS	Shewmr4_3307	NC_008321.1	3949383	3950294	D	catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase	3949383..3950294	Shewanella sp. MR-4	4253874
YP_735432.1	CDS	Shewmr4_3308	NC_008321.1	3950465	3950941	D	PFAM: blue (type 1) copper domain protein; KEGG: son:SO0809 azurin precursor; blue (type1) copper domain-containing protein	3950465..3950941	Shewanella sp. MR-4	4253875
YP_735433.1	CDS	Shewmr4_3309	NC_008321.1	3951086	3951391	R	KEGG: son:SO0808 hypothetical protein; hypothetical protein	complement(3951086..3951391)	Shewanella sp. MR-4	4253876
YP_735434.1	CDS	Shewmr4_3310	NC_008321.1	3951746	3953014	D	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sdn:Sden_0469 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase	3951746..3953014	Shewanella sp. MR-4	4253877
YP_735435.1	CDS	Shewmr4_3311	NC_008321.1	3953100	3953666	R	KEGG: son:SO0807 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase	complement(3953100..3953666)	Shewanella sp. MR-4	4253878
YP_735436.1	CDS	Shewmr4_3312	NC_008321.1	3954000	3955766	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Alkaline phosphatase; KEGG: son:SO0806 alkaline phosphatase, putative; twin-arginine translocation pathway signal	complement(3954000..3955766)	Shewanella sp. MR-4	4253879
YP_735437.1	CDS	Shewmr4_3313	NC_008321.1	3956037	3956462	D	PFAM: CBS domain containing protein; KEGG: son:SO0805 CBS domain protein; CBS domain-containing protein	3956037..3956462	Shewanella sp. MR-4	4253880
YP_735438.1	CDS	Shewmr4_3315	NC_008321.1	3957194	3958564	R	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO0802 MATE efflux family protein; MATE efflux family protein	complement(3957194..3958564)	Shewanella sp. MR-4	4253881
YP_735439.1	CDS	Shewmr4_3316	NC_008321.1	3958867	3959781	D	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: son:SO0801 hypothetical protein; alpha/beta hydrolase domain-containing protein	3958867..3959781	Shewanella sp. MR-4	4253882
YP_735440.1	CDS	Shewmr4_3317	NC_008321.1	3959876	3960358	R	PFAM: protein of unknown function DUF985; KEGG: son:SO0799 hypothetical protein; hypothetical protein	complement(3959876..3960358)	Shewanella sp. MR-4	4253883
YP_735441.1	CDS	Shewmr4_3318	NC_008321.1	3960502	3962664	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0798 hypothetical protein; TonB-dependent receptor	3960502..3962664	Shewanella sp. MR-4	4253884
YP_735442.1	CDS	Shewmr4_3319	NC_008321.1	3962664	3963125	D	KEGG: son:SO0797 hypothetical protein; hypothetical protein	3962664..3963125	Shewanella sp. MR-4	4253885
YP_735443.1	CDS	Shewmr4_3320	NC_008321.1	3963420	3964328	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO0796 GGDEF family protein; diguanylate cyclase	3963420..3964328	Shewanella sp. MR-4	4253886
YP_735444.1	CDS	Shewmr4_3321	NC_008321.1	3964414	3966642	R	TIGRFAM: uncharacterized domain; PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: sdn:Sden_0824 protein of unknown function DUF181; hypothetical protein	complement(3964414..3966642)	Shewanella sp. MR-4	4253887
YP_735445.1	CDS	Shewmr4_3322	NC_008321.1	3966807	3966986	R	KEGG: son:SO0793 hypothetical protein; hypothetical protein	complement(3966807..3966986)	Shewanella sp. MR-4	4253888
YP_735446.1	CDS	Shewmr4_3323	NC_008321.1	3967324	3968988	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: son:SO0987 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	3967324..3968988	Shewanella sp. MR-4	4253889
YP_735447.1	CDS	Shewmr4_3324	NC_008321.1	3969141	3969530	R	KEGG: son:SO0792 hypothetical protein; hypothetical protein	complement(3969141..3969530)	Shewanella sp. MR-4	4253890
YP_735448.1	CDS	Shewmr4_3325	NC_008321.1	3969919	3970164	D	KEGG: son:SO0788 hypothetical protein; hypothetical protein	3969919..3970164	Shewanella sp. MR-4	4253891
YP_735449.1	CDS	Shewmr4_3326	NC_008321.1	3970528	3971454	D	KEGG: son:SO0784 hypothetical protein; hypothetical protein	3970528..3971454	Shewanella sp. MR-4	4253892
YP_735450.1	CDS	Shewmr4_3327	NC_008321.1	3971496	3973208	D	KEGG: ecj:JW2609 hypothetical protein; hypothetical protein	3971496..3973208	Shewanella sp. MR-4	4253893
YP_735451.1	CDS	Shewmr4_3328	NC_008321.1	3973198	3975351	D	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: ecj:JW2608 conserved hypothetical protein; DEAD/DEAH box helicase domain-containing protein	3973198..3975351	Shewanella sp. MR-4	4253894
YP_735452.1	CDS	Shewmr4_3329	NC_008321.1	3975744	3978632	R	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase	complement(3975744..3978632)	Shewanella sp. MR-4	4253895
YP_735453.1	CDS	Shewmr4_3330	NC_008321.1	3978755	3979144	R	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H	complement(3978755..3979144)	Shewanella sp. MR-4	4253896
YP_735454.1	CDS	gcvT	NC_008321.1	3979170	3980264	R	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T	complement(3979170..3980264)	Shewanella sp. MR-4	4253897
YP_735455.1	CDS	Shewmr4_3332	NC_008321.1	3980665	3981888	R	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO0778 oxidoreductase, FAD-binding, UbiH/Coq6 family; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	complement(3980665..3981888)	Shewanella sp. MR-4	4253898
YP_735456.1	CDS	Shewmr4_3333	NC_008321.1	3981925	3983148	R	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO0777 2-octaprenyl-6-methoxyphenol hydroxylase; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase / 2-octaprenyl-6-methoxyphenol hydroxylase	complement(3981925..3983148)	Shewanella sp. MR-4	4253899
YP_735457.1	CDS	Shewmr4_3334	NC_008321.1	3983254	3983829	R	TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: son:SO0776 hypothetical protein; yecA family protein	complement(3983254..3983829)	Shewanella sp. MR-4	4253900
YP_735458.1	CDS	Shewmr4_3335	NC_008321.1	3984055	3984357	D	PFAM: protein of unknown function DUF710; KEGG: son:SO0775 hypothetical protein; cell division protein ZapA	3984055..3984357	Shewanella sp. MR-4	4253901
YP_735459.1	CDS	Shewmr4_3336	NC_008321.1	3984661	3985335	D	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: son:SO0774 5-formyltetrahydrofolate cyclo-ligase family protein; 5-formyltetrahydrofolate cyclo-ligase	3984661..3985335	Shewanella sp. MR-4	4253902
YP_735460.1	CDS	Shewmr4_3337	NC_008321.1	3985475	3986194	R	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO0772 oxidoreductase, short chain dehydrogenase/reductase family; short chain dehydrogenase	complement(3985475..3986194)	Shewanella sp. MR-4	4253903
YP_735461.1	CDS	Shewmr4_3338	NC_008321.1	3986405	3986794	D	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: son:SO0771 hypothetical protein; putative thiol-disulfide oxidoreductase DCC	3986405..3986794	Shewanella sp. MR-4	4253904
YP_735462.1	CDS	Shewmr4_3339	NC_008321.1	3986874	3987809	R	oxidizes malate to oxaloacetate; malate dehydrogenase	complement(3986874..3987809)	Shewanella sp. MR-4	4253905
YP_735463.1	CDS	Shewmr4_3340	NC_008321.1	3988100	3988570	D	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor	3988100..3988570	Shewanella sp. MR-4	4253906
YP_735464.1	CDS	Shewmr4_3341	NC_008321.1	3988823	3989455	R	PFAM: NAD-dependent epimerase/dehydratase; KEGG: son:SO0768 putative NADH-flavin reductase; NAD-dependent epimerase/dehydratase	complement(3988823..3989455)	Shewanella sp. MR-4	4253907
YP_735465.1	CDS	Shewmr4_3342	NC_008321.1	3989559	3990461	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_2893 LysR, substrate-binding; LysR family transcriptional regulator	3989559..3990461	Shewanella sp. MR-4	4253908
YP_735466.1	CDS	Shewmr4_3343	NC_008321.1	3990526	3991467	R	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: son:SO0740 melanin biosynthesis protein TyrA, putative; Dyp-type peroxidase family protein	complement(3990526..3991467)	Shewanella sp. MR-4	4253909
YP_735467.1	CDS	Shewmr4_3344	NC_008321.1	3991674	3993386	R	KEGG: son:SO0741 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2	complement(3991674..3993386)	Shewanella sp. MR-4	4253910
YP_735468.1	CDS	Shewmr4_3345	NC_008321.1	3993526	3994575	R	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: son:SO0742 iron(III) ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(3993526..3994575)	Shewanella sp. MR-4	4253911
YP_735469.1	CDS	Shewmr4_3346	NC_008321.1	3994572	3996206	R	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO0743 iron(III) ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component	complement(3994572..3996206)	Shewanella sp. MR-4	4253912
YP_735470.1	CDS	Shewmr4_3347	NC_008321.1	3996296	3997303	R	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein; extracellular solute-binding protein	complement(3996296..3997303)	Shewanella sp. MR-4	4253913
YP_735471.1	CDS	Shewmr4_3348	NC_008321.1	3997522	3997944	D	KEGG: son:SO0745 hypothetical protein; hypothetical protein	3997522..3997944	Shewanella sp. MR-4	4253914
YP_735472.1	CDS	Shewmr4_3349	NC_008321.1	3997952	3998548	R	PFAM: Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO0746 glutathione S-transferase family protein; glutathione S-transferase domain-containing protein	complement(3997952..3998548)	Shewanella sp. MR-4	4253915
YP_735473.1	CDS	Shewmr4_3350	NC_008321.1	3998619	3999368	R	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: son:SO0747 ferredoxin--NADP reductase; oxidoreductase FAD/NAD(P)-binding subunit	complement(3998619..3999368)	Shewanella sp. MR-4	4253916
YP_735474.1	CDS	Shewmr4_3351	NC_008321.1	3999498	4000190	R	KEGG: son:SO0748 hypothetical protein; hypothetical protein	complement(3999498..4000190)	Shewanella sp. MR-4	4253917
YP_735475.1	CDS	Shewmr4_3352	NC_008321.1	4000276	4000869	D	PFAM: Phosphoglycerate mutase; KEGG: son:SO0749 hypothetical protein; phosphoglycerate mutase	4000276..4000869	Shewanella sp. MR-4	4253918
YP_735476.1	CDS	Shewmr4_3353	NC_008321.1	4000881	4002371	D	PFAM: ferredoxin-dependent glutamate synthase; KEGG: son:SO0750 glutamate synthase, putative; ferredoxin-dependent glutamate synthase	4000881..4002371	Shewanella sp. MR-4	4253919
YP_735477.1	CDS	Shewmr4_3354	NC_008321.1	4002516	4002722	D	KEGG: son:SO0752 hypothetical protein; hypothetical protein	4002516..4002722	Shewanella sp. MR-4	4253920
YP_735478.1	CDS	Shewmr4_3355	NC_008321.1	4002763	4003020	R	KEGG: son:SO0753 hypothetical protein; hypothetical protein	complement(4002763..4003020)	Shewanella sp. MR-4	4253921
YP_735479.1	CDS	Shewmr4_3356	NC_008321.1	4003137	4004921	R	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0754 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(4003137..4004921)	Shewanella sp. MR-4	4253922
YP_735480.1	CDS	Shewmr4_3357	NC_008321.1	4005370	4005546	D	KEGG: son:SO0755 hypothetical protein; hypothetical protein	4005370..4005546	Shewanella sp. MR-4	4253923
YP_735481.1	CDS	Shewmr4_3358	NC_008321.1	4005597	4006655	R	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase	complement(4005597..4006655)	Shewanella sp. MR-4	4253924
YP_735482.1	CDS	Shewmr4_3359	NC_008321.1	4006963	4008150	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO0757 TPR domain protein; TPR repeat-containing protein	complement(4006963..4008150)	Shewanella sp. MR-4	4253925
YP_735483.1	CDS	Shewmr4_3360	NC_008321.1	4008269	4008616	R	KEGG: son:SO0758 hypothetical protein; hypothetical protein	complement(4008269..4008616)	Shewanella sp. MR-4	4253926
YP_735484.1	CDS	Shewmr4_3361	NC_008321.1	4008733	4009983	R	PFAM: Rh family protein/ammonium transporter; KEGG: son:SO0760 ammonium transporter; Rh family protein/ammonium transporter	complement(4008733..4009983)	Shewanella sp. MR-4	4253927
YP_735485.1	CDS	Shewmr4_3362	NC_008321.1	4009994	4010332	R	PFAM: nitrogen regulatory protein P-II; KEGG: son:SO0761 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II	complement(4009994..4010332)	Shewanella sp. MR-4	4253928
YP_735486.1	CDS	Shewmr4_3363	NC_008321.1	4010641	4011183	D	PFAM: isochorismatase hydrolase; KEGG: son:SO0762 isochorismatase family protein; isochorismatase hydrolase	4010641..4011183	Shewanella sp. MR-4	4253929
YP_735487.1	CDS	Shewmr4_3364	NC_008321.1	4011234	4011968	R	KEGG: ppr:PBPRA1347 hypothetical protein; hypothetical protein	complement(4011234..4011968)	Shewanella sp. MR-4	4253930
YP_735488.1	CDS	Shewmr4_3365	NC_008321.1	4012068	4012877	R	KEGG: son:SO0764 hypothetical protein; hypothetical protein	complement(4012068..4012877)	Shewanella sp. MR-4	4253931
YP_735489.1	CDS	Shewmr4_3366	NC_008321.1	4013011	4013715	R	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO0765 threonine efflux protein, putative; lysine exporter protein LysE/YggA	complement(4013011..4013715)	Shewanella sp. MR-4	4253932
YP_735490.1	CDS	Shewmr4_3367	NC_008321.1	4013807	4014637	R	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO0766 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator	complement(4013807..4014637)	Shewanella sp. MR-4	4253933
YP_735491.1	CDS	Shewmr4_3368	NC_008321.1	4014790	4015536	R	KEGG: son:SO0766.1 hypothetical protein; hypothetical protein	complement(4014790..4015536)	Shewanella sp. MR-4	4253934
YP_735492.1	CDS	Shewmr4_3369	NC_008321.1	4015645	4017285	R	PFAM: Alkaline phosphatase; KEGG: cps:CPS_3933 alkaline phosphatase family protein; alkaline phosphatase	complement(4015645..4017285)	Shewanella sp. MR-4	4253935
YP_735493.1	CDS	Shewmr4_3370	NC_008321.1	4017328	4018824	R	PFAM: Alkaline phosphatase; KEGG: cps:CPS_3932 alkaline phosphatase family protein; alkaline phosphatase	complement(4017328..4018824)	Shewanella sp. MR-4	4253936
YP_735494.1	CDS	Shewmr4_3371	NC_008321.1	4019178	4020005	D	KEGG: son:SO0736 conserved hypothetical protein; hypothetical protein	4019178..4020005	Shewanella sp. MR-4	4253937
YP_735495.1	CDS	Shewmr4_3372	NC_008321.1	4020260	4022239	D	KEGG: mag:amb2980 hypothetical 918 kDa protein Y4LL; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase with PAS/PAC sensor	4020260..4022239	Shewanella sp. MR-4	4253938
YP_735496.1	CDS	Shewmr4_3373	NC_008321.1	4022325	4022882	D	PFAM: Cold-shock protein, DNA-binding; Excalibur domain protein; SMART: Cold shock protein; KEGG: son:SO0733 cold shock domain family protein; cold-shock DNA-binding protein family protein	4022325..4022882	Shewanella sp. MR-4	4253939
YP_735497.1	CDS	Shewmr4_3374	NC_008321.1	4022985	4027901	R	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: son:SO4539 serine protease, subtilase family; peptidase S8/S53 subtilisin kexin sedolisin	complement(4022985..4027901)	Shewanella sp. MR-4	4253940
YP_735498.1	CDS	Shewmr4_3375	NC_008321.1	4028162	4028524	D	PFAM: Thioredoxin domain; KEGG: son:SO0732 hypothetical protein; thioredoxin domain-containing protein	4028162..4028524	Shewanella sp. MR-4	4253941
YP_735499.1	CDS	Shewmr4_3376	NC_008321.1	4028670	4029242	R	hypothetical protein	complement(4028670..4029242)	Shewanella sp. MR-4	4253942
YP_735500.1	CDS	Shewmr4_3377	NC_008321.1	4029586	4031073	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0726 ABC transporter, ATP-binding protein; ABC transporter-like protein	complement(4029586..4031073)	Shewanella sp. MR-4	4253943
YP_735501.1	CDS	Shewmr4_3378	NC_008321.1	4031170	4031910	R	KEGG: neu:NE1275 hypothetical protein; hypothetical protein	complement(4031170..4031910)	Shewanella sp. MR-4	4253944
YP_735502.1	CDS	Shewmr4_3379	NC_008321.1	4032116	4034335	R	KEGG: son:SO0725 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI	complement(4032116..4034335)	Shewanella sp. MR-4	4253945
YP_735503.1	CDS	Shewmr4_3380	NC_008321.1	4034704	4034955	D	KEGG: son:SO0721 hypothetical protein; hypothetical protein	4034704..4034955	Shewanella sp. MR-4	4253946
YP_735504.1	CDS	Shewmr4_3381	NC_008321.1	4035138	4035671	D	KEGG: son:SO0720 hypothetical protein; hypothetical protein	4035138..4035671	Shewanella sp. MR-4	4253947
YP_735505.1	CDS	Shewmr4_3382	NC_008321.1	4035852	4036256	R	PFAM: Carboxymuconolactone decarboxylase; KEGG: pae:PA4486 4-carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase	complement(4035852..4036256)	Shewanella sp. MR-4	4253948
YP_735506.1	CDS	Shewmr4_3383	NC_008321.1	4036445	4037428	R	KEGG: vpa:VP0621 putative nonspecific acid phosphatase precursor; putative nonspecific acid phosphatase precursor	complement(4036445..4037428)	Shewanella sp. MR-4	4253949
YP_735507.1	CDS	Shewmr4_3384	NC_008321.1	4037463	4038890	R	KEGG: vpa:VPA0690 hypothetical protein; hypothetical protein	complement(4037463..4038890)	Shewanella sp. MR-4	4253950
YP_735508.1	CDS	Shewmr4_3385	NC_008321.1	4038887	4040608	R	PFAM: von Willebrand factor, type A; KEGG: vfi:VF1421 transporter; von Willebrand factor, type A	complement(4038887..4040608)	Shewanella sp. MR-4	4253951
YP_735509.1	CDS	Shewmr4_3386	NC_008321.1	4040601	4041608	R	PFAM: von Willebrand factor, type A; KEGG: vpa:VPA0688 hypothetical protein; von Willebrand factor, type A	complement(4040601..4041608)	Shewanella sp. MR-4	4253952
YP_735510.1	CDS	Shewmr4_3387	NC_008321.1	4041595	4042113	R	KEGG: vpa:VPA0687 hypothetical protein; hypothetical protein	complement(4041595..4042113)	Shewanella sp. MR-4	4253953
YP_735511.1	CDS	Shewmr4_3388	NC_008321.1	4042110	4043105	R	PFAM: protein of unknown function DUF58; KEGG: vpa:VPA0686 hypothetical protein; hypothetical protein	complement(4042110..4043105)	Shewanella sp. MR-4	4253954
YP_735512.1	CDS	Shewmr4_3389	NC_008321.1	4043111	4044112	R	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: vpa:VPA0685 MoxR-related protein; ATPase	complement(4043111..4044112)	Shewanella sp. MR-4	4253955
YP_735513.1	CDS	Shewmr4_3390	NC_008321.1	4044096	4045403	R	PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator; radical SAM domain-containing protein	complement(4044096..4045403)	Shewanella sp. MR-4	4253956
YP_735514.1	CDS	Shewmr4_3391	NC_008321.1	4045472	4046989	R	PFAM: sulfatase; KEGG: vpa:VPA0683 putative arylsulfatase protein; sulfatase	complement(4045472..4046989)	Shewanella sp. MR-4	4253957
YP_735515.1	CDS	Shewmr4_3392	NC_008321.1	4047142	4047987	D	PFAM: regulatory protein, LysR; KEGG: vvu:VV20150 transcriptional regulator; LysR family transcriptional regulator	4047142..4047987	Shewanella sp. MR-4	4253958
YP_735516.1	CDS	Shewmr4_3393	NC_008321.1	4048160	4051807	R	TIGRFAM: putative outer membrane adhesin like protein; PFAM: von Willebrand factor, type A; KEGG: tcx:Tcr_0105 VCBS; putative outer membrane adhesin like protein	complement(4048160..4051807)	Shewanella sp. MR-4	4253959
YP_735517.1	CDS	Shewmr4_3394	NC_008321.1	4051804	4052400	R	hypothetical protein	complement(4051804..4052400)	Shewanella sp. MR-4	4253960
YP_735518.1	CDS	Shewmr4_3395	NC_008321.1	4053198	4054499	R	PFAM: HipA domain protein; KEGG: son:SO0706 hypothetical protein; HipA domain-containing protein	complement(4053198..4054499)	Shewanella sp. MR-4	4253961
YP_735519.1	CDS	Shewmr4_3396	NC_008321.1	4054503	4054796	R	PFAM: helix-turn-helix domain protein; KEGG: son:SO0705 transcriptional regulator, Cro/CI family; XRE family transcriptional regulator	complement(4054503..4054796)	Shewanella sp. MR-4	4253962
YP_735520.1	CDS	groEL	NC_008321.1	4055174	4056811	R	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL	complement(4055174..4056811)	Shewanella sp. MR-4	4253963
YP_735521.1	CDS	groES	NC_008321.1	4056869	4057159	R	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES	complement(4056869..4057159)	Shewanella sp. MR-4	4253964
YP_735522.1	CDS	Shewmr4_3399	NC_008321.1	4057387	4058745	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO0702 MATE efflux family protein; MATE efflux family protein	4057387..4058745	Shewanella sp. MR-4	4253965
YP_735523.1	CDS	Shewmr4_3400	NC_008321.1	4058833	4059825	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0701 transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(4058833..4059825)	Shewanella sp. MR-4	4253966
YP_735524.1	CDS	Shewmr4_3401	NC_008321.1	4059955	4061037	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppr:PBPRA2319 hypothetical membrane-fusion protein; RND family efflux transporter MFP subunit	4059955..4061037	Shewanella sp. MR-4	4253967
YP_735525.1	CDS	Shewmr4_3402	NC_008321.1	4061041	4064130	D	PFAM: acriflavin resistance protein; KEGG: ppr:PBPRA2318 hypothetical transporter, AcrB/D/F family; acriflavin resistance protein	4061041..4064130	Shewanella sp. MR-4	4253968
YP_735526.1	CDS	Shewmr4_3403	NC_008321.1	4064312	4064695	R	KEGG: son:SO0699 hypothetical protein; hypothetical protein	complement(4064312..4064695)	Shewanella sp. MR-4	4253969
YP_735527.1	CDS	Shewmr4_3404	NC_008321.1	4064886	4065506	R	PFAM: FxsA cytoplasmic membrane protein; KEGG: son:SO0698 FxsA protein; FxsA cytoplasmic membrane protein	complement(4064886..4065506)	Shewanella sp. MR-4	4253970
YP_735528.1	CDS	Shewmr4_3405	NC_008321.1	4065730	4066053	D	PFAM: CutA1 divalent ion tolerance protein; KEGG: son:SO0697 periplasmic divalent cation tolerance protein CutA; CutA1 divalent ion tolerance protein	4065730..4066053	Shewanella sp. MR-4	4253971
YP_735529.1	CDS	dipZ	NC_008321.1	4066050	4067891	D	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein precursor	4066050..4067891	Shewanella sp. MR-4	4253972
YP_735530.1	CDS	Shewmr4_3407	NC_008321.1	4068044	4069681	D	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: son:SO0695 glutathione-regulated potassium-efflux system protein KefC, putative; sodium/hydrogen exchanger	4068044..4069681	Shewanella sp. MR-4	4253973
YP_735531.1	CDS	Shewmr4_3408	NC_008321.1	4069966	4071111	D	KEGG: son:SO0694 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; galactokinase	4069966..4071111	Shewanella sp. MR-4	4253974
YP_735532.1	CDS	Shewmr4_3409	NC_008321.1	4071229	4072260	D	PFAM: Aldose 1-epimerase; KEGG: son:SO0693 aldose 1-epimerase; aldose 1-epimerase	4071229..4072260	Shewanella sp. MR-4	4253975
YP_735533.1	CDS	Shewmr4_3410	NC_008321.1	4072370	4072774	R	KEGG: son:SO0691 hypothetical protein; hypothetical protein	complement(4072370..4072774)	Shewanella sp. MR-4	4253976
YP_735534.1	CDS	Shewmr4_3411	NC_008321.1	4073097	4074095	R	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO0640 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase	complement(4073097..4074095)	Shewanella sp. MR-4	4253977
YP_735535.1	CDS	Shewmr4_3412	NC_008321.1	4074258	4076039	R	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO4013 hypothetical protein; Sel1 domain-containing protein	complement(4074258..4076039)	Shewanella sp. MR-4	4253978
YP_735536.1	CDS	Shewmr4_3413	NC_008321.1	4076133	4077476	R	PFAM: protein kinase; leucine-rich repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: son:SO4016 hypothetical protein; serine/threonine protein kinase	complement(4076133..4077476)	Shewanella sp. MR-4	4253979
YP_735537.1	CDS	Shewmr4_3414	NC_008321.1	4077645	4079069	D	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: son:SO4017 transglycosylase, Slt family; MltD domain-containing protein	4077645..4079069	Shewanella sp. MR-4	4253980
YP_735538.1	CDS	Shewmr4_3415	NC_008321.1	4079134	4080507	R	KEGG: son:SO4018 hypothetical protein; hypothetical protein	complement(4079134..4080507)	Shewanella sp. MR-4	4253981
YP_735539.1	CDS	Shewmr4_3416	NC_008321.1	4080866	4083583	D	KEGG: son:SO4019 hypothetical protein; hypothetical protein	4080866..4083583	Shewanella sp. MR-4	4253982
YP_735540.1	CDS	Shewmr4_3417	NC_008321.1	4083745	4086519	R	PFAM: peptidase M16 domain protein; KEGG: son:SO4022 peptidase, M16 family; peptidase M16 domain-containing protein	complement(4083745..4086519)	Shewanella sp. MR-4	4253983
YP_735541.1	CDS	Shewmr4_3418	NC_008321.1	4086751	4087314	R	KEGG: son:SO4027 hypothetical protein; hypothetical protein	complement(4086751..4087314)	Shewanella sp. MR-4	4253984
YP_735542.1	CDS	Shewmr4_3419	NC_008321.1	4087443	4088153	R	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: son:SO4028 single-strand binding protein; single-strand binding protein	complement(4087443..4088153)	Shewanella sp. MR-4	4253985
YP_735543.1	CDS	Shewmr4_3420	NC_008321.1	4088261	4089628	R	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4029 transporter, putative; major facilitator transporter	complement(4088261..4089628)	Shewanella sp. MR-4	4253986
YP_735544.1	CDS	Shewmr4_3421	NC_008321.1	4090039	4092891	D	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: son:SO4030 excinuclease ABC, A subunit; excinuclease ABC subunit A	4090039..4092891	Shewanella sp. MR-4	4253987
YP_735545.1	CDS	Shewmr4_3422	NC_008321.1	4093004	4093342	D	KEGG: son:SO4031 hypothetical protein; hypothetical protein	4093004..4093342	Shewanella sp. MR-4	4253988
YP_735546.1	CDS	Shewmr4_3423	NC_008321.1	4093427	4094467	D	PFAM: peptidase M20; peptidase M28; KEGG: son:SO4032 hypothetical protein; peptidase M28	4093427..4094467	Shewanella sp. MR-4	4253989
YP_735547.1	CDS	Shewmr4_3424	NC_008321.1	4094664	4096532	D	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO4034 ATP-dependent RNA helicase DeaD; DEAD/DEAH box helicase domain-containing protein	4094664..4096532	Shewanella sp. MR-4	4253990
YP_735548.1	CDS	Shewmr4_3425	NC_008321.1	4096924	4097292	D	KEGG: son:SO4035 hypothetical protein; hypothetical protein	4096924..4097292	Shewanella sp. MR-4	4253991
YP_735549.1	CDS	Shewmr4_3426	NC_008321.1	4097327	4097938	R	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO4039 hydrolase, haloacid dehalogenase-like family; HAD family hydrolase	complement(4097327..4097938)	Shewanella sp. MR-4	4253992
YP_735550.1	CDS	Shewmr4_3427	NC_008321.1	4097968	4098957	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4040 integral membrane domain protein; hypothetical protein	complement(4097968..4098957)	Shewanella sp. MR-4	4253993
YP_735551.1	CDS	Shewmr4_3428	NC_008321.1	4099277	4100119	D	KEGG: son:SO4042 hydratase/decarboxylase family protein; hydratase/decarboxylase family protein	4099277..4100119	Shewanella sp. MR-4	4253994
YP_735552.1	CDS	Shewmr4_3429	NC_008321.1	4100243	4101358	D	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: son:SO4043 TonB domain protein; TonB family protein	4100243..4101358	Shewanella sp. MR-4	4253995
YP_735553.1	CDS	Shewmr4_3430	NC_008321.1	4101363	4101836	R	KEGG: son:SO4044 hypothetical protein; hypothetical protein	complement(4101363..4101836)	Shewanella sp. MR-4	4253996
YP_735554.1	CDS	Shewmr4_3431	NC_008321.1	4103429	4104484	R	PFAM: cytochrome c, class I; KEGG: son:SO4047 cytochrome c family protein; cytochrome c, class I	complement(4103429..4104484)	Shewanella sp. MR-4	4253997
YP_735555.1	CDS	Shewmr4_3432	NC_008321.1	4104495	4105121	R	KEGG: son:SO4048 cytochrome c family protein; cytochrome c family protein	complement(4104495..4105121)	Shewanella sp. MR-4	4253998
YP_735556.1	CDS	Shewmr4_3433	NC_008321.1	4105312	4106340	R	KEGG: son:SO4050 hypothetical protein; hypothetical protein	complement(4105312..4106340)	Shewanella sp. MR-4	4253999
YP_735557.1	CDS	Shewmr4_3434	NC_008321.1	4106357	4107415	R	PFAM: secretion protein HlyD family protein; KEGG: son:SO4051 HlyD family secretion protein; secretion protein HlyD family protein	complement(4106357..4107415)	Shewanella sp. MR-4	4254000
YP_735558.1	CDS	Shewmr4_3435	NC_008321.1	4107424	4107900	R	PFAM: regulatory protein, MarR; KEGG: son:SO4052 transcriptional regulator, MarR family; MarR family transcriptional regulator	complement(4107424..4107900)	Shewanella sp. MR-4	4254001
YP_735559.1	CDS	Shewmr4_3436	NC_008321.1	4108088	4108204	D	hypothetical protein	4108088..4108204	Shewanella sp. MR-4	4254002
YP_735560.1	CDS	metF	NC_008321.1	4108271	4109164	R	MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase	complement(4108271..4109164)	Shewanella sp. MR-4	4254003
YP_735561.1	CDS	metL	NC_008321.1	4109468	4111861	R	multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II	complement(4109468..4111861)	Shewanella sp. MR-4	4254004
YP_735562.1	CDS	Shewmr4_3439	NC_008321.1	4111873	4113054	R	KEGG: son:SO4056 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; cystathionine gamma-synthase	complement(4111873..4113054)	Shewanella sp. MR-4	4254005
YP_735563.1	CDS	Shewmr4_3440	NC_008321.1	4113259	4113573	D	when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ	4113259..4113573	Shewanella sp. MR-4	4254006
YP_735564.1	CDS	Shewmr4_3441	NC_008321.1	4113675	4114418	D	PFAM: protein of unknown function DUF81; KEGG: son:SO4058 hypothetical protein; hypothetical protein	4113675..4114418	Shewanella sp. MR-4	4254007
YP_735565.1	CDS	Shewmr4_3442	NC_008321.1	4114532	4115476	R	PFAM: Polysulphide reductase, NrfD; KEGG: son:SO4060 polysulfide reductase, subunit C; polysulfide reductase, NrfD	complement(4114532..4115476)	Shewanella sp. MR-4	4254008
YP_735566.1	CDS	Shewmr4_3443	NC_008321.1	4115479	4116045	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4061 polysulfide reductase, subunit B; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	complement(4115479..4116045)	Shewanella sp. MR-4	4254009
YP_735567.1	CDS	Shewmr4_3444	NC_008321.1	4116058	4118352	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4062 polysulfide reductase, subunit A; twin-arginine translocation pathway signal	complement(4116058..4118352)	Shewanella sp. MR-4	4254010
YP_735568.1	CDS	Shewmr4_3445	NC_008321.1	4118829	4119455	R	PFAM: pentapeptide repeat protein; KEGG: son:SO4064 mcbg protein, putative; pentapeptide repeat-containing protein	complement(4118829..4119455)	Shewanella sp. MR-4	4254011
YP_735569.1	CDS	Shewmr4_3446	NC_008321.1	4119859	4120170	D	hypothetical protein	4119859..4120170	Shewanella sp. MR-4	4254012
YP_735570.1	CDS	Shewmr4_3447	NC_008321.1	4120157	4121260	D	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase	4120157..4121260	Shewanella sp. MR-4	4254013
YP_735571.1	CDS	Shewmr4_3448	NC_008321.1	4121842	4122747	D	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: bth:BT3559 hypothetical protein; endonuclease/exonuclease/phosphatase	4121842..4122747	Shewanella sp. MR-4	4254014
YP_735572.1	CDS	Shewmr4_3449	NC_008321.1	4123778	4124563	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4069 hypothetical protein; type 11 methyltransferase	complement(4123778..4124563)	Shewanella sp. MR-4	4254015
YP_735573.1	CDS	Shewmr4_3450	NC_008321.1	4124834	4125544	R	PFAM: protein of unknown function DUF541; KEGG: son:SO4070 hypothetical protein; hypothetical protein	complement(4124834..4125544)	Shewanella sp. MR-4	4254016
YP_735574.1	CDS	rimO	NC_008321.1	4125965	4127395	D	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase	4125965..4127395	Shewanella sp. MR-4	4254017
YP_735575.1	CDS	Shewmr4_3452	NC_008321.1	4127711	4127938	R	PFAM: protein of unknown function DUF331; KEGG: son:SO4073 hypothetical protein; hypothetical protein	complement(4127711..4127938)	Shewanella sp. MR-4	4254018
YP_735576.1	CDS	Shewmr4_3453	NC_008321.1	4128194	4129039	D	KEGG: son:SO4075 hypothetical protein; hypothetical protein	4128194..4129039	Shewanella sp. MR-4	4254019
YP_735577.1	CDS	Shewmr4_3454	NC_008321.1	4129221	4131362	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4077 TonB-dependent receptor, putative; TonB-dependent receptor	4129221..4131362	Shewanella sp. MR-4	4254020
YP_735578.1	CDS	Shewmr4_3455	NC_008321.1	4131479	4132822	R	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: son:SO4078 PmbA protein; microcin-processing peptidase 1	complement(4131479..4132822)	Shewanella sp. MR-4	4254021
YP_735579.1	CDS	Shewmr4_3456	NC_008321.1	4132998	4133531	D	PFAM: protein of unknown function DUF615; KEGG: son:SO4079 hypothetical protein; hypothetical protein	4132998..4133531	Shewanella sp. MR-4	4254022
YP_735580.1	CDS	Shewmr4_3457	NC_008321.1	4133561	4136050	D	PFAM: Ig domain protein, group 1 domain protein; KEGG: son:SO4080 hypothetical protein; Ig domain-containing protein	4133561..4136050	Shewanella sp. MR-4	4254023
YP_735581.1	CDS	Shewmr4_3458	NC_008321.1	4136103	4137434	R	PFAM: amino acid permease-associated region; KEGG: son:SO4081 amino acid permease; amino acid permease-associated protein	complement(4136103..4137434)	Shewanella sp. MR-4	4254024
YP_735582.1	CDS	Shewmr4_3459	NC_008321.1	4137958	4138497	D	KEGG: ppr:PBPRB1460 hypothetical protein; hypothetical protein	4137958..4138497	Shewanella sp. MR-4	4254025
YP_735583.1	CDS	Shewmr4_3460	NC_008321.1	4138630	4139031	R	hypothetical protein	complement(4138630..4139031)	Shewanella sp. MR-4	4254026
YP_735584.1	CDS	Shewmr4_3461	NC_008321.1	4139200	4140351	R	PFAM: ABC-2 type transporter; KEGG: son:SO4087 conserved hypothetical protein; ABC-2 type transporter	complement(4139200..4140351)	Shewanella sp. MR-4	4254027
YP_735585.1	CDS	Shewmr4_3462	NC_008321.1	4140353	4141642	R	PFAM: ABC-2 type transporter; KEGG: son:SO4088 conserved hypothetical protein; ABC-2 type transporter	complement(4140353..4141642)	Shewanella sp. MR-4	4254028
YP_735586.1	CDS	Shewmr4_3463	NC_008321.1	4141648	4142622	R	PFAM: secretion protein HlyD family protein; KEGG: son:SO4089 HlyD family secretion protein; secretion protein HlyD family protein	complement(4141648..4142622)	Shewanella sp. MR-4	4254029
YP_735587.1	CDS	Shewmr4_3464	NC_008321.1	4142612	4144081	R	PFAM: outer membrane efflux protein; KEGG: son:SO4090 outer membrane efflux protein; outer membrane efflux protein	complement(4142612..4144081)	Shewanella sp. MR-4	4254030
YP_735588.1	CDS	Shewmr4_3465	NC_008321.1	4144144	4145637	R	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: son:SO4091 TldD protein; microcin-processing peptidase 2	complement(4144144..4145637)	Shewanella sp. MR-4	4254031
YP_735589.1	CDS	Shewmr4_3466	NC_008321.1	4145717	4146565	R	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: son:SO4092 hydrolase, carbon-nitrogen family; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase	complement(4145717..4146565)	Shewanella sp. MR-4	4254032
YP_735590.1	CDS	Shewmr4_3467	NC_008321.1	4146489	4150739	R	TIGRFAM: conserved hypothetical protein; KEGG: son:SO4093 hypothetical protein; hypothetical protein	complement(4146489..4150739)	Shewanella sp. MR-4	4254033
YP_735591.1	CDS	Shewmr4_3468	NC_008321.1	4150739	4152247	R	involved in the processing of the 5'end of 16S rRNA; ribonuclease G	complement(4150739..4152247)	Shewanella sp. MR-4	4254034
YP_735592.1	CDS	Shewmr4_3469	NC_008321.1	4152359	4152943	R	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: son:SO4095 maf protein; maf protein	complement(4152359..4152943)	Shewanella sp. MR-4	4254035
YP_735593.1	CDS	Shewmr4_3470	NC_008321.1	4152946	4153434	R	PFAM: Rod shape-determining protein MreD; KEGG: son:SO4096 rod shape-determining protein MreD; rod shape-determining protein MreD	complement(4152946..4153434)	Shewanella sp. MR-4	4254036
YP_735594.1	CDS	Shewmr4_3471	NC_008321.1	4153434	4154495	R	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC	complement(4153434..4154495)	Shewanella sp. MR-4	4254037
YP_735595.1	CDS	Shewmr4_3472	NC_008321.1	4154540	4155589	R	functions in MreBCD complex in some organisms; rod shape-determining protein MreB	complement(4154540..4155589)	Shewanella sp. MR-4	4254038
YP_735596.1	CDS	Shewmr4_3473	NC_008321.1	4155932	4159717	R	KEGG: son:SO4100 MSHA biogenesis protein MshQ; MSHA biogenesis protein MshQ	complement(4155932..4159717)	Shewanella sp. MR-4	4254039
YP_735597.1	CDS	Shewmr4_3474	NC_008321.1	4159707	4160165	R	KEGG: son:SO4101 MSHA biogenesis protein MshP; MSHA biogenesis protein MshP	complement(4159707..4160165)	Shewanella sp. MR-4	4254040
YP_735598.1	CDS	Shewmr4_3475	NC_008321.1	4160155	4161018	R	PFAM: methylation site containing protein; KEGG: son:SO4102 MSHA biogenesis protein MshO; methylation site containing protein	complement(4160155..4161018)	Shewanella sp. MR-4	4254041
YP_735599.1	CDS	Shewmr4_3476	NC_008321.1	4161018	4161593	R	PFAM: methylation site containing protein; KEGG: son:SO4103 MSHA pilin protein MshD; methylation site containing protein	complement(4161018..4161593)	Shewanella sp. MR-4	4254042
YP_735600.1	CDS	Shewmr4_3477	NC_008321.1	4161583	4162071	R	PFAM: methylation site containing protein; KEGG: son:SO4104 MSHA pilin protein MshC; methylation site containing protein	complement(4161583..4162071)	Shewanella sp. MR-4	4254043
YP_735601.1	CDS	Shewmr4_3478	NC_008321.1	4162322	4162831	R	PFAM: methylation site containing protein; KEGG: sdn:Sden_3340 methylation; methylation site containing protein	complement(4162322..4162831)	Shewanella sp. MR-4	4254044
YP_735602.1	CDS	Shewmr4_3479	NC_008321.1	4162845	4163354	R	PFAM: methylation site containing protein; KEGG: son:SO4105 MSHA pilin protein MshA; methylation site containing protein	complement(4162845..4163354)	Shewanella sp. MR-4	4254045
YP_735603.1	CDS	Shewmr4_3480	NC_008321.1	4163407	4164024	R	PFAM: methylation site containing protein; KEGG: son:SO4106 MSHA pilin protein MshB; methylation site containing protein	complement(4163407..4164024)	Shewanella sp. MR-4	4254046
YP_735604.1	CDS	Shewmr4_3481	NC_008321.1	4164101	4164595	R	KEGG: son:SO4107 hypothetical protein; hypothetical protein	complement(4164101..4164595)	Shewanella sp. MR-4	4254047
YP_735605.1	CDS	Shewmr4_3482	NC_008321.1	4164634	4165854	R	PFAM: type II secretion system protein; KEGG: son:SO4108 MSHA biogenesis protein MshG; type II secretion system protein	complement(4164634..4165854)	Shewanella sp. MR-4	4254048
YP_735606.1	CDS	Shewmr4_3483	NC_008321.1	4165857	4167617	R	PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: son:SO4109 MSHA biogenesis protein MshE; type II secretion system protein E	complement(4165857..4167617)	Shewanella sp. MR-4	4254049
YP_735607.1	CDS	Shewmr4_3484	NC_008321.1	4167614	4168939	R	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO4110 MSHA biogenesis protein MshN, putative; TPR repeat-containing protein	complement(4167614..4168939)	Shewanella sp. MR-4	4254050
YP_735608.1	CDS	Shewmr4_3485	NC_008321.1	4168936	4169868	R	KEGG: son:SO4111 MSHA biogenesis protein MshM; MSHA biogenesis protein MshM	complement(4168936..4169868)	Shewanella sp. MR-4	4254051
YP_735609.1	CDS	Shewmr4_3486	NC_008321.1	4169875	4171560	R	TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB, short N-terminal domain protein; KEGG: son:SO4112 MSHA biogenesis protein MshL; pilus (MSHA type) biogenesis protein MshL	complement(4169875..4171560)	Shewanella sp. MR-4	4254052
YP_735610.1	CDS	Shewmr4_3487	NC_008321.1	4171575	4171892	R	KEGG: son:SO4113 MSHA biogenesis protein MshK; MSHA biogenesis protein MshK	complement(4171575..4171892)	Shewanella sp. MR-4	4254053
YP_735611.1	CDS	Shewmr4_3488	NC_008321.1	4171879	4172529	R	KEGG: son:SO4114 MSHA biogenesis protein MshJ; MSHA biogenesis protein MshJ	complement(4171879..4172529)	Shewanella sp. MR-4	4254054
YP_735612.1	CDS	Shewmr4_3489	NC_008321.1	4172526	4173128	R	KEGG: sdn:Sden_3350 hypothetical protein; hypothetical protein	complement(4172526..4173128)	Shewanella sp. MR-4	4254055
YP_735613.1	CDS	Shewmr4_3490	NC_008321.1	4173125	4174003	R	KEGG: son:SO4114.2 hypothetical biogenesis protein MshI; biogenesis protein MshI	complement(4173125..4174003)	Shewanella sp. MR-4	4254056
YP_735614.1	CDS	Shewmr4_3491	NC_008321.1	4174241	4176151	R	regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD	complement(4174241..4176151)	Shewanella sp. MR-4	4254057
YP_735615.1	CDS	Shewmr4_3492	NC_008321.1	4176366	4177610	R	PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: son:SO4118 malate oxidoreductase, putative; malate dehydrogenase	complement(4176366..4177610)	Shewanella sp. MR-4	4254058
YP_735616.1	CDS	rpmE	NC_008321.1	4178122	4178334	R	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31	complement(4178122..4178334)	Shewanella sp. MR-4	4254059
YP_735617.1	CDS	Shewmr4_3494	NC_008321.1	4178500	4179660	R	KEGG: son:SO4121 hypothetical protein; hypothetical protein	complement(4178500..4179660)	Shewanella sp. MR-4	4254060
YP_735618.1	CDS	Shewmr4_3495	NC_008321.1	4179764	4181974	D	TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO4122 primosomal protein N'; primosomal protein N'	4179764..4181974	Shewanella sp. MR-4	4254061
YP_735619.1	CDS	argS	NC_008321.1	4182086	4183831	D	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase	4182086..4183831	Shewanella sp. MR-4	4254062
YP_735620.1	CDS	Shewmr4_3497	NC_008321.1	4183835	4184530	D	PFAM: Sporulation domain protein; KEGG: son:SO4124 cell division protein FtsN, putative; sporulation domain-containing protein	4183835..4184530	Shewanella sp. MR-4	4254063
YP_735621.1	CDS	Shewmr4_3498	NC_008321.1	4184833	4185057	D	KEGG: son:SO4126 hypothetical protein; hypothetical protein	4184833..4185057	Shewanella sp. MR-4	4254064
YP_735622.1	CDS	Shewmr4_3499	NC_008321.1	4185502	4186347	R	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: vvy:VV2149 AraC-type DNA-binding domain-containing protein; AraC family transcriptional regulator	complement(4185502..4186347)	Shewanella sp. MR-4	4254065
YP_735623.1	CDS	Shewmr4_3500	NC_008321.1	4186469	4187002	D	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: vvu:VV12207 hypothetical protein; alkylhydroperoxidase	4186469..4187002	Shewanella sp. MR-4	4254066
YP_735624.1	CDS	Shewmr4_3501	NC_008321.1	4187293	4188225	R	PFAM: band 7 protein; KEGG: son:SO4128 SPFH domain/Band 7 family protein; SPFH domain-containing protein/band 7 family protein	complement(4187293..4188225)	Shewanella sp. MR-4	4254067
YP_735625.1	CDS	Shewmr4_3502	NC_008321.1	4188225	4189160	R	PFAM: band 7 protein; KEGG: son:SO4129 SPFH domain/Band 7 family protein; SPFH domain-containing protein/band 7 family protein	complement(4188225..4189160)	Shewanella sp. MR-4	4254068
YP_735626.1	CDS	Shewmr4_3503	NC_008321.1	4189172	4189642	R	PFAM: protein of unknown function DUF107; KEGG: son:SO4130 hypothetical protein; hypothetical protein	complement(4189172..4189642)	Shewanella sp. MR-4	4254069
YP_735627.1	CDS	Shewmr4_3504	NC_008321.1	4190130	4190882	D	KEGG: son:SO4131 hypothetical protein; hypothetical protein	4190130..4190882	Shewanella sp. MR-4	4254070
YP_735628.1	CDS	Shewmr4_3505	NC_008321.1	4190995	4191753	R	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase	complement(4190995..4191753)	Shewanella sp. MR-4	4254071
YP_735629.1	CDS	Shewmr4_3506	NC_008321.1	4192166	4192378	D	PFAM: protein of unknown function DUF465; KEGG: son:SO4134 hypothetical protein; hypothetical protein	4192166..4192378	Shewanella sp. MR-4	4254072
YP_735630.1	CDS	Shewmr4_3507	NC_008321.1	4192438	4193613	R	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4136 decarboxylase, pyridoxal-dependent; ornithine decarboxylase	complement(4192438..4193613)	Shewanella sp. MR-4	4254073
YP_735631.1	CDS	Shewmr4_3508	NC_008321.1	4194030	4194509	R	KEGG: son:SO4138 hypothetical protein; hypothetical protein	complement(4194030..4194509)	Shewanella sp. MR-4	4254074
YP_735632.1	CDS	Shewmr4_3509	NC_008321.1	4194678	4195514	D	PFAM: MscS Mechanosensitive ion channel; KEGG: pca:Pcar_0306 hypothetical protein; mechanosensitive ion channel protein MscS	4194678..4195514	Shewanella sp. MR-4	4254075
YP_735633.1	CDS	Shewmr4_3510	NC_008321.1	4195632	4197170	D	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO4139 hypothetical protein; Sel1 domain-containing protein	4195632..4197170	Shewanella sp. MR-4	4254076
YP_735634.1	CDS	Shewmr4_3511	NC_008321.1	4197763	4198092	D	KEGG: son:SO4142 cytochrome c family protein; cytochrome c family protein	4197763..4198092	Shewanella sp. MR-4	4254077
YP_735635.1	CDS	Shewmr4_3512	NC_008321.1	4198270	4200000	D	KEGG: son:SO4143 hypothetical protein; hypothetical protein	4198270..4200000	Shewanella sp. MR-4	4254078
YP_735636.1	CDS	Shewmr4_3513	NC_008321.1	4200047	4201435	D	KEGG: son:SO4144 cytochrome c, putative; cytochrome c	4200047..4201435	Shewanella sp. MR-4	4254079
YP_735637.1	CDS	Shewmr4_3514	NC_008321.1	4201715	4202875	D	PFAM: Benzoate membrane transport protein; sulphate transporter; KEGG: son:SO4150 transporter, putative; sulfate transporter	4201715..4202875	Shewanella sp. MR-4	4254080
YP_735638.1	CDS	Shewmr4_3515	NC_008321.1	4203217	4203675	D	TIGRFAM: TonB family protein; KEGG: pat:Patl_2439 hypothetical protein; TonB family protein	4203217..4203675	Shewanella sp. MR-4	4254081
YP_735639.1	CDS	Shewmr4_3516	NC_008321.1	4204015	4205838	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4155 sensor histidine kinase; histidine kinase	complement(4204015..4205838)	Shewanella sp. MR-4	4254082
YP_735640.1	CDS	Shewmr4_3517	NC_008321.1	4206027	4206632	D	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO4157 DNA-binding response regulator; two component LuxR family transcriptional regulator	4206027..4206632	Shewanella sp. MR-4	4254083
YP_735641.1	CDS	Shewmr4_3518	NC_008321.1	4207072	4207353	D	hypothetical protein	4207072..4207353	Shewanella sp. MR-4	4254084
YP_735642.1	CDS	Shewmr4_3520	NC_008321.1	4208070	4208675	D	PFAM: methylation site containing protein; KEGG: son:SO4159 hypothetical protein; methylation site containing protein	4208070..4208675	Shewanella sp. MR-4	4254085
YP_735643.1	CDS	Shewmr4_3521	NC_008321.1	4208830	4209354	D	heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit	4208830..4209354	Shewanella sp. MR-4	4254086
YP_735644.1	CDS	hslU	NC_008321.1	4209373	4210701	D	heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU	4209373..4210701	Shewanella sp. MR-4	4254087
YP_735645.1	CDS	Shewmr4_3523	NC_008321.1	4210847	4211233	D	PFAM: protein of unknown function DUF971; KEGG: son:SO4164 hypothetical protein; hypothetical protein	4210847..4211233	Shewanella sp. MR-4	4254088
YP_735646.1	CDS	Shewmr4_3524	NC_008321.1	4211303	4211890	D	KEGG: pae:PA0571 hypothetical protein; hypothetical protein	4211303..4211890	Shewanella sp. MR-4	4254089
YP_735647.1	CDS	Shewmr4_3525	NC_008321.1	4212274	4213743	D	PFAM: KAP P-loop domain protein; KEGG: sdn:Sden_3419 kap P-loop; KAP P-loop domain-containing protein	4212274..4213743	Shewanella sp. MR-4	4254090
YP_735648.1	CDS	Shewmr4_3526	NC_008321.1	4214249	4215826	D	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: son:SO4169 hypothetical protein; deoxyribodipyrimidine photolyase-like protein	4214249..4215826	Shewanella sp. MR-4	4254091
YP_735649.1	CDS	Shewmr4_3527	NC_008321.1	4215852	4216562	D	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO4170 C factor cell-cell signaling protein; C factor cell-cell signaling protein	4215852..4216562	Shewanella sp. MR-4	4254092
YP_735650.1	CDS	Shewmr4_3528	NC_008321.1	4216623	4217099	R	KEGG: son:SO4171 hypothetical protein; hypothetical protein	complement(4216623..4217099)	Shewanella sp. MR-4	4254093
YP_735651.1	CDS	Shewmr4_3529	NC_008321.1	4217131	4217682	R	PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: son:SO4172 DNA-binding response regulator; response regulator receiver protein	complement(4217131..4217682)	Shewanella sp. MR-4	4254094
YP_735652.1	CDS	Shewmr4_3530	NC_008321.1	4217679	4218968	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4173 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(4217679..4218968)	Shewanella sp. MR-4	4254095
YP_735653.1	CDS	Shewmr4_3531	NC_008321.1	4218972	4219892	R	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO4174 NAD dependent epimerase/dehydratase family protein; dTDP-4-dehydrorhamnose reductase	complement(4218972..4219892)	Shewanella sp. MR-4	4254096
YP_735654.1	CDS	Shewmr4_3532	NC_008321.1	4220073	4221920	D	KEGG: son:SO4176 hypothetical protein; hypothetical protein	4220073..4221920	Shewanella sp. MR-4	4254097
YP_735655.1	CDS	Shewmr4_3533	NC_008321.1	4221922	4222284	R	KEGG: son:SO4177 hypothetical protein; hypothetical protein	complement(4221922..4222284)	Shewanella sp. MR-4	4254098
YP_735656.1	CDS	Shewmr4_3534	NC_008321.1	4222490	4223545	R	KEGG: son:SO4178 hypothetical protein; hypothetical protein	complement(4222490..4223545)	Shewanella sp. MR-4	4254099
YP_735657.1	CDS	Shewmr4_3535	NC_008321.1	4223545	4224873	R	PFAM: glycosyl transferase, family 2; chitin synthase; KEGG: son:SO4179 glycosyl transferase, group 2 family protein; glycosyl transferase family protein	complement(4223545..4224873)	Shewanella sp. MR-4	4254100
YP_735658.1	CDS	Shewmr4_3536	NC_008321.1	4224870	4226258	R	KEGG: son:SO4180 hypothetical protein; hypothetical protein	complement(4224870..4226258)	Shewanella sp. MR-4	4254101
YP_735659.1	CDS	Shewmr4_3537	NC_008321.1	4226557	4227483	R	PFAM: pseudouridine synthase; KEGG: sdn:Sden_0482 pseudouridine synthase; pseudouridine synthase	complement(4226557..4227483)	Shewanella sp. MR-4	4254102
YP_735660.1	CDS	Shewmr4_3538	NC_008321.1	4227536	4228111	R	KEGG: son:SO4182 ATP-dependent protease La (LON) domain protein, putative; ATP-dependent protease La	complement(4227536..4228111)	Shewanella sp. MR-4	4254103
YP_735661.1	CDS	Shewmr4_3539	NC_008321.1	4228256	4229311	R	KEGG: sdn:Sden_0480 hypothetical protein; hypothetical protein	complement(4228256..4229311)	Shewanella sp. MR-4	4254104
YP_735662.1	CDS	Shewmr4_3540	NC_008321.1	4229574	4232012	D	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ilo:IL2271 outer membrane protein; TonB-dependent receptor	4229574..4232012	Shewanella sp. MR-4	4254105
YP_735663.1	CDS	Shewmr4_3541	NC_008321.1	4232140	4232601	D	PFAM: conserved hypothetical protein 22; KEGG: son:SO4189 hypothetical protein; hypothetical protein	4232140..4232601	Shewanella sp. MR-4	4254106
YP_735664.1	CDS	Shewmr4_3542	NC_008321.1	4232745	4233665	D	catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase	4232745..4233665	Shewanella sp. MR-4	4254107
YP_735665.1	CDS	Shewmr4_3543	NC_008321.1	4233834	4234445	D	KEGG: son:SO4191 DedA family protein; DedA family protein	4233834..4234445	Shewanella sp. MR-4	4254108
YP_735666.1	CDS	Shewmr4_3544	NC_008321.1	4234537	4234974	D	TIGRFAM: TonB family protein; KEGG: cps:CPS_2467 hypothetical protein; TonB family protein	4234537..4234974	Shewanella sp. MR-4	4254109
YP_735667.1	CDS	Shewmr4_3545	NC_008321.1	4235039	4236625	R	KEGG: son:SO4193 hypothetical protein; hypothetical protein	complement(4235039..4236625)	Shewanella sp. MR-4	4254110
YP_735668.1	CDS	Shewmr4_3546	NC_008321.1	4236766	4237806	R	TIGRFAM: conserved hypothetical protein; KEGG: son:SO4194 hypothetical protein; hypothetical protein	complement(4236766..4237806)	Shewanella sp. MR-4	4254111
YP_735669.1	CDS	Shewmr4_3547	NC_008321.1	4237880	4238392	R	PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO4195 PAP2 family protein; phosphoesterase, PA-phosphatase related	complement(4237880..4238392)	Shewanella sp. MR-4	4254112
YP_735670.1	CDS	Shewmr4_3548	NC_008321.1	4238748	4239002	R	KEGG: son:SO4196 hypothetical protein; hypothetical protein	complement(4238748..4239002)	Shewanella sp. MR-4	4254113
YP_735671.1	CDS	Shewmr4_3549	NC_008321.1	4239321	4239806	D	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA	4239321..4239806	Shewanella sp. MR-4	4254114
YP_735672.1	CDS	Shewmr4_3550	NC_008321.1	4239938	4240990	D	PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: son:SO4198 arginase family protein; arginase/agmatinase/formiminoglutamase	4239938..4240990	Shewanella sp. MR-4	4254115
YP_735673.1	CDS	Shewmr4_3551	NC_008321.1	4241232	4241987	D	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4199 ubiquinone/menaquinone biosynthesis methlytransferase UbiE; demethylmenaquinone methyltransferase	4241232..4241987	Shewanella sp. MR-4	4254116
YP_735674.1	CDS	Shewmr4_3552	NC_008321.1	4241987	4242607	D	PFAM: protein of unknown function DUF1243; KEGG: son:SO4200 conserved hypothetical protein; hypothetical protein	4241987..4242607	Shewanella sp. MR-4	4254117
YP_735675.1	CDS	Shewmr4_3553	NC_008321.1	4242604	4244253	D	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: son:SO4201 ubiquinone biosynthesis protein AarF; 2-octaprenylphenol hydroxylase	4242604..4244253	Shewanella sp. MR-4	4254118
YP_735676.1	CDS	Shewmr4_3554	NC_008321.1	4244313	4244570	D	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: son:SO4202 Sec-independent protein translocase protein TatA; twin arginine-targeting protein translocase	4244313..4244570	Shewanella sp. MR-4	4254119
YP_735677.1	CDS	Shewmr4_3555	NC_008321.1	4244577	4245020	D	TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: son:SO4203 Sec-independent protein translocase protein TatB; twin-arginine translocation protein, TatB subunit	4244577..4245020	Shewanella sp. MR-4	4254120
YP_735678.1	CDS	Shewmr4_3556	NC_008321.1	4245023	4245772	D	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: son:SO4204 Sec-independent periplasmic protein translocation protein TatC; Sec-independent protein translocase TatC	4245023..4245772	Shewanella sp. MR-4	4254121
YP_735679.1	CDS	Shewmr4_3557	NC_008321.1	4245817	4246347	D	KEGG: son:SO4205 hypothetical protein; hypothetical protein	4245817..4246347	Shewanella sp. MR-4	4254122
YP_735680.1	CDS	Shewmr4_3558	NC_008321.1	4246347	4247150	D	PFAM: TatD-related deoxyribonuclease; KEGG: son:SO4206 hydrolase, TatD family; Sec-independent protein translocase TatD	4246347..4247150	Shewanella sp. MR-4	4254123
YP_735681.1	CDS	Shewmr4_3559	NC_008321.1	4247143	4249020	D	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; KEGG: son:SO4207 GGDEF domain protein; diguanylate cyclase	4247143..4249020	Shewanella sp. MR-4	4254124
YP_735682.1	CDS	Shewmr4_3560	NC_008321.1	4249030	4250040	D	catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase	4249030..4250040	Shewanella sp. MR-4	4254125
YP_735683.1	CDS	Shewmr4_3561	NC_008321.1	4255401	4255499	R	KEGG: son:SO0043 hypothetical protein; hypothetical protein	complement(4255401..4255499)	Shewanella sp. MR-4	4254126
YP_735684.1	CDS	Shewmr4_3562	NC_008321.1	4262299	4265025	R	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA	complement(4262299..4265025)	Shewanella sp. MR-4	4254127
YP_735685.1	CDS	Shewmr4_3563	NC_008321.1	4265086	4265985	R	PFAM: peptidase M23B; KEGG: son:SO4212 peptidase, M23/M37 family; peptidase M23B	complement(4265086..4265985)	Shewanella sp. MR-4	4254128
YP_735686.1	CDS	lpxC	NC_008321.1	4266474	4267394	R	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	complement(4266474..4267394)	Shewanella sp. MR-4	4254129
YP_735687.1	CDS	Shewmr4_3566	NC_008321.1	4267575	4268762	R	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ	complement(4267575..4268762)	Shewanella sp. MR-4	4254130
YP_735688.1	CDS	Shewmr4_3567	NC_008321.1	4268790	4270025	R	TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: son:SO4216 cell division protein FtsA; cell division protein FtsA	complement(4268790..4270025)	Shewanella sp. MR-4	4254131
YP_735689.1	CDS	Shewmr4_3568	NC_008321.1	4270006	4270755	R	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: son:SO4217 cell division protein FtsQ; polypeptide-transport-associated domain-containing protein	complement(4270006..4270755)	Shewanella sp. MR-4	4254132
YP_735690.1	CDS	murC	NC_008321.1	4270907	4272373	R	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase	complement(4270907..4272373)	Shewanella sp. MR-4	4254133
YP_735691.1	CDS	murG	NC_008321.1	4272376	4273464	R	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	complement(4272376..4273464)	Shewanella sp. MR-4	4254134
YP_735692.1	CDS	Shewmr4_3571	NC_008321.1	4273464	4274675	R	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: son:SO4220 cell division protein FtsW; cell division protein FtsW	complement(4273464..4274675)	Shewanella sp. MR-4	4254135
YP_735693.1	CDS	murD	NC_008321.1	4274665	4275984	R	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase	complement(4274665..4275984)	Shewanella sp. MR-4	4254136
YP_735694.1	CDS	mraY	NC_008321.1	4275991	4277073	R	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase	complement(4275991..4277073)	Shewanella sp. MR-4	4254137
YP_735695.1	CDS	Shewmr4_3574	NC_008321.1	4277074	4278456	R	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: son:SO4223 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	complement(4277074..4278456)	Shewanella sp. MR-4	4254138
YP_735696.1	CDS	murE	NC_008321.1	4278453	4279934	R	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase	complement(4278453..4279934)	Shewanella sp. MR-4	4254139
YP_735697.1	CDS	Shewmr4_3576	NC_008321.1	4279931	4281682	R	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: son:SO4225 peptidoglycan synthetase FtsI; peptidoglycan synthetase FtsI	complement(4279931..4281682)	Shewanella sp. MR-4	4254140
YP_735698.1	CDS	Shewmr4_3577	NC_008321.1	4281696	4282010	R	TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: son:SO4226 cell division protein FtsL; cell division protein FtsL	complement(4281696..4282010)	Shewanella sp. MR-4	4254141
YP_735699.1	CDS	mraW	NC_008321.1	4282023	4282964	R	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: son:SO4227 putative S-adenosyl methionine adenyltransferase; S-adenosyl-methyltransferase MraW	complement(4282023..4282964)	Shewanella sp. MR-4	4254142
YP_735700.1	CDS	Shewmr4_3579	NC_008321.1	4282995	4283453	R	MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ	complement(4282995..4283453)	Shewanella sp. MR-4	4254143
YP_735701.1	CDS	Shewmr4_3580	NC_008321.1	4283971	4284675	D	KEGG: sdn:Sden_0345 PepSY-associated TM helix; PepSY-associated TM helix	4283971..4284675	Shewanella sp. MR-4	4254144
YP_735702.1	CDS	Shewmr4_3581	NC_008321.1	4284672	4285751	D	PFAM: ferredoxin; PepSY-associated TM helix domain protein; KEGG: sdn:Sden_0344 ferredoxin; PepSY-associated TM helix domain-containing protein	4284672..4285751	Shewanella sp. MR-4	4254145
YP_735703.1	CDS	Shewmr4_3582	NC_008321.1	4285847	4286167	D	KEGG: son:SO4229 hypothetical protein; hypothetical protein	4285847..4286167	Shewanella sp. MR-4	4254146
YP_735704.1	CDS	Shewmr4_3583	NC_008321.1	4286238	4287722	R	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: son:SO4230 glycerol kinase; glycerol kinase	complement(4286238..4287722)	Shewanella sp. MR-4	4254147
YP_735705.1	CDS	Shewmr4_3584	NC_008321.1	4287911	4289257	R	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sdn:Sden_0340 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein	complement(4287911..4289257)	Shewanella sp. MR-4	4254148
YP_735706.1	CDS	leuD	NC_008321.1	4289785	4290390	R	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit	complement(4289785..4290390)	Shewanella sp. MR-4	4254149
YP_735707.1	CDS	Shewmr4_3586	NC_008321.1	4290415	4291839	R	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit	complement(4290415..4291839)	Shewanella sp. MR-4	4254150
YP_735708.1	CDS	Shewmr4_3587	NC_008321.1	4291839	4292933	R	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase	complement(4291839..4292933)	Shewanella sp. MR-4	4254151
YP_735709.1	CDS	Shewmr4_3588	NC_008321.1	4292985	4294553	R	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase	complement(4292985..4294553)	Shewanella sp. MR-4	4254152
YP_735710.1	CDS	Shewmr4_3589	NC_008321.1	4295050	4296831	D	SMART: Tetratricopeptide domain protein; KEGG: son:SO4240 hypothetical protein; response regulator receiver protein	4295050..4296831	Shewanella sp. MR-4	4254153
YP_735711.1	CDS	Shewmr4_3590	NC_008321.1	4296813	4298636	R	TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO4241 ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase RecQ	complement(4296813..4298636)	Shewanella sp. MR-4	4254154
YP_735712.1	CDS	Shewmr4_3591	NC_008321.1	4298914	4299378	D	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: son:SO4242 hypothetical protein; hypothetical protein	4298914..4299378	Shewanella sp. MR-4	4254155
YP_735713.1	CDS	Shewmr4_3592	NC_008321.1	4299595	4300479	D	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4243 rarD protein; transporter DMT superfamily protein	4299595..4300479	Shewanella sp. MR-4	4254156
YP_735714.1	CDS	Shewmr4_3593	NC_008321.1	4300542	4301060	R	KEGG: son:SO4244 hypothetical protein; hypothetical protein	complement(4300542..4301060)	Shewanella sp. MR-4	4254157
YP_735715.1	CDS	Shewmr4_3594	NC_008321.1	4301164	4302501	R	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase	complement(4301164..4302501)	Shewanella sp. MR-4	4254158
YP_735716.1	CDS	rpmG	NC_008321.1	4302807	4302980	R	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33	complement(4302807..4302980)	Shewanella sp. MR-4	4254159
YP_735717.1	CDS	rpmB	NC_008321.1	4302987	4303223	R	required for 70S ribosome assembly; 50S ribosomal protein L28	complement(4302987..4303223)	Shewanella sp. MR-4	4254160
YP_735718.1	CDS	radC	NC_008321.1	4303346	4304023	R	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC	complement(4303346..4304023)	Shewanella sp. MR-4	4254161
YP_735719.1	CDS	Shewmr4_3598	NC_008321.1	4304145	4305362	D	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: son:SO4249 DNA/pantothenate metabolism flavoprotein; phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase	4304145..4305362	Shewanella sp. MR-4	4254162
YP_735720.1	CDS	dut	NC_008321.1	4305363	4305821	D	catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase	4305363..4305821	Shewanella sp. MR-4	4254163
YP_735721.1	CDS	slmA	NC_008321.1	4305851	4306444	D	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein	4305851..4306444	Shewanella sp. MR-4	4254164
YP_735722.1	CDS	Shewmr4_3601	NC_008321.1	4306580	4308565	D	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: son:SO4252 prolyl oligopeptidase family protein; peptidase S9 prolyl oligopeptidase	4306580..4308565	Shewanella sp. MR-4	4254165
YP_735723.1	CDS	folE	NC_008321.1	4308833	4309483	D	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I	4308833..4309483	Shewanella sp. MR-4	4254166
YP_735724.1	CDS	pyrE	NC_008321.1	4309578	4310225	R	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase	complement(4309578..4310225)	Shewanella sp. MR-4	4254167
YP_735725.1	CDS	rph	NC_008321.1	4310322	4311035	R	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH	complement(4310322..4311035)	Shewanella sp. MR-4	4254168
YP_735726.1	CDS	Shewmr4_3605	NC_008321.1	4311249	4312112	D	TIGRFAM: conserved hypothetical protein; PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: son:SO4257 conserved hypothetical protein TIGR00255; hypothetical protein	4311249..4312112	Shewanella sp. MR-4	4254169
YP_735727.1	CDS	Shewmr4_3606	NC_008321.1	4312172	4312888	R	manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase	complement(4312172..4312888)	Shewanella sp. MR-4	4254170
YP_735728.1	CDS	Shewmr4_3607	NC_008321.1	4313247	4314137	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0369 transcriptional regulator, LysR family; LysR family transcriptional regulator	4313247..4314137	Shewanella sp. MR-4	4254171
YP_735729.1	CDS	Shewmr4_3608	NC_008321.1	4314278	4314943	D	KEGG: son:SO0366 hypothetical protein; hypothetical protein	4314278..4314943	Shewanella sp. MR-4	4254172
YP_735730.1	CDS	Shewmr4_3609	NC_008321.1	4314963	4316387	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0365 hypothetical permeases of the major facilitator superfamily; twin-arginine translocation pathway signal	complement(4314963..4316387)	Shewanella sp. MR-4	4254173
YP_735731.1	CDS	Shewmr4_3610	NC_008321.1	4316505	4317569	R	PFAM: aminoglycoside phosphotransferase; KEGG: son:SO0364 hypothetical protein; aminoglycoside phosphotransferase	complement(4316505..4317569)	Shewanella sp. MR-4	4254174
YP_735732.1	CDS	Shewmr4_3611	NC_008321.1	4317553	4318434	R	KEGG: son:SO0363 hypothetical protein; hypothetical protein	complement(4317553..4318434)	Shewanella sp. MR-4	4254175
YP_735733.1	CDS	Shewmr4_3612	NC_008321.1	4318580	4320076	R	KEGG: son:SO0362 hypothetical protein; hypothetical protein	complement(4318580..4320076)	Shewanella sp. MR-4	4254176
YP_735734.1	CDS	gmk	NC_008321.1	4320450	4321073	D	Essential for recycling GMP and indirectly, cGMP; guanylate kinase	4320450..4321073	Shewanella sp. MR-4	4254177
YP_735735.1	CDS	rpoZ	NC_008321.1	4321132	4321410	D	promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega	4321132..4321410	Shewanella sp. MR-4	4254178
YP_735736.1	CDS	Shewmr4_3615	NC_008321.1	4321454	4323556	D	KEGG: son:SO0359 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	4321454..4323556	Shewanella sp. MR-4	4254179
YP_735737.1	CDS	Shewmr4_3616	NC_008321.1	4323579	4323962	D	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO0358 endoribonuclease L-PSP, putative; putative endoribonuclease L-PSP	4323579..4323962	Shewanella sp. MR-4	4254180
YP_735738.1	CDS	Shewmr4_3617	NC_008321.1	4324195	4325859	D	PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO0355 AMP-binding protein; AMP-dependent synthetase and ligase	4324195..4325859	Shewanella sp. MR-4	4254181
YP_735739.1	CDS	Shewmr4_3618	NC_008321.1	4326019	4326969	D	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: son:SO0354 sodium/calcium exchanger; CaCA family Na(+)/Ca(+) antiporter	4326019..4326969	Shewanella sp. MR-4	4254182
YP_735740.1	CDS	Shewmr4_3619	NC_008321.1	4327146	4327850	D	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO0353 TPR domain protein; TPR repeat-containing protein	4327146..4327850	Shewanella sp. MR-4	4254183
YP_735741.1	CDS	Shewmr4_3620	NC_008321.1	4327934	4329013	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: son:SO0352 sensor histidine kinase, putative; putative signal transduction histidine kinase	4327934..4329013	Shewanella sp. MR-4	4254184
YP_735742.1	CDS	Shewmr4_3621	NC_008321.1	4329013	4329609	D	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO0351 DNA-binding response regulator, LuxR family; two component LuxR family transcriptional regulator	4329013..4329609	Shewanella sp. MR-4	4254185
YP_735743.1	CDS	Shewmr4_3622	NC_008321.1	4329615	4330379	R	KEGG: son:SO0350 hypothetical protein; hypothetical protein	complement(4329615..4330379)	Shewanella sp. MR-4	4254186
YP_735744.1	CDS	Shewmr4_3623	NC_008321.1	4330395	4330760	R	KEGG: son:SO0350 hypothetical protein; hypothetical protein	complement(4330395..4330760)	Shewanella sp. MR-4	4254187
YP_735745.1	CDS	Shewmr4_3624	NC_008321.1	4330977	4332503	D	KEGG: son:SO0349 magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI	4330977..4332503	Shewanella sp. MR-4	4254188
YP_735746.1	CDS	Shewmr4_3625	NC_008321.1	4332602	4333504	D	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0348 acyltransferase family protein; putative acyltransferase	4332602..4333504	Shewanella sp. MR-4	4254189
YP_735747.1	CDS	Shewmr4_3626	NC_008321.1	4333512	4334453	D	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0347 acyltransferase family protein; putative acyltransferase	4333512..4334453	Shewanella sp. MR-4	4254190
YP_735748.1	CDS	Shewmr4_3627	NC_008321.1	4334490	4334954	R	PFAM: protein of unknown function DUF523; KEGG: ppu:PP5158 hypothetical protein; hypothetical protein	complement(4334490..4334954)	Shewanella sp. MR-4	4254191
YP_735749.1	CDS	Shewmr4_3628	NC_008321.1	4335287	4336075	D	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: son:SO0346 transcriptional regulator GntR family; GntR family transcriptional regulator	4335287..4336075	Shewanella sp. MR-4	4254192
YP_735750.1	CDS	prpB	NC_008321.1	4336142	4337020	D	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase	4336142..4337020	Shewanella sp. MR-4	4254193
YP_735751.1	CDS	Shewmr4_3630	NC_008321.1	4337254	4338381	D	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase	4337254..4338381	Shewanella sp. MR-4	4254194
YP_735752.1	CDS	Shewmr4_3631	NC_008321.1	4338532	4341123	D	Catalyzes the conversion of citrate to isocitrate; aconitate hydratase	4338532..4341123	Shewanella sp. MR-4	4254195
YP_735753.1	CDS	Shewmr4_3632	NC_008321.1	4341210	4342403	D	TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: son:SO0342 hypothetical protein; methylitaconate delta2-delta3-isomerase	4341210..4342403	Shewanella sp. MR-4	4254196
YP_735754.1	CDS	Shewmr4_3633	NC_008321.1	4342684	4347198	D	KEGG: son:SO0341 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	4342684..4347198	Shewanella sp. MR-4	4254197
YP_735755.1	CDS	Shewmr4_3634	NC_008321.1	4347258	4348349	R	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase	complement(4347258..4348349)	Shewanella sp. MR-4	4254198
YP_735756.1	CDS	Shewmr4_3635	NC_008321.1	4348506	4349321	R	PFAM: protein of unknown function DUF1223; KEGG: hch:HCH_00871 uncharacterized secreted protein; hypothetical protein	complement(4348506..4349321)	Shewanella sp. MR-4	4254199
YP_735757.1	CDS	Shewmr4_3636	NC_008321.1	4349394	4349657	D	PFAM: Modulator of Rho-dependent transcription termination; KEGG: son:SO0339 hypothetical transcriptional antiterminator; transcriptional antiterminator, Rof	4349394..4349657	Shewanella sp. MR-4	4254200
YP_735758.1	CDS	Shewmr4_3637	NC_008321.1	4349678	4350013	D	KEGG: son:SO0338 hypothetical protein; hypothetical protein	4349678..4350013	Shewanella sp. MR-4	4254201
YP_735759.1	CDS	Shewmr4_3638	NC_008321.1	4350168	4350524	R	PFAM: Endoribonuclease L-PSP; KEGG: son:SO0337 hypothetical translation initiation inhibitor, YjgF family; endoribonuclease L-PSP	complement(4350168..4350524)	Shewanella sp. MR-4	4254202
YP_735760.1	CDS	Shewmr4_3639	NC_008321.1	4350581	4352086	R	PFAM: Na+/H+ antiporter NhaC; KEGG: son:SO0336 hypothetical Na+/H+ antiporter; Na+/H+ antiporter NhaC	complement(4350581..4352086)	Shewanella sp. MR-4	4254203
YP_735761.1	CDS	Shewmr4_3640	NC_008321.1	4352266	4352487	D	PFAM: protein of unknown function DUF904; KEGG: son:SO0335 hypothetical protein; hypothetical protein	4352266..4352487	Shewanella sp. MR-4	4254204
YP_735762.1	CDS	Shewmr4_3641	NC_008321.1	4352484	4352696	R	PFAM: protein of unknown function DUF1107; KEGG: son:SO0334 hypothetical protein; hypothetical protein	complement(4352484..4352696)	Shewanella sp. MR-4	4254205
YP_735763.1	CDS	Shewmr4_3642	NC_008321.1	4353146	4353757	R	PFAM: DSBA oxidoreductase; KEGG: son:SO0333 thiol:disulfide interchange protein DsbA; DSBA oxidoreductase	complement(4353146..4353757)	Shewanella sp. MR-4	4254206
YP_735764.1	CDS	Shewmr4_3643	NC_008321.1	4353885	4354940	R	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase	complement(4353885..4354940)	Shewanella sp. MR-4	4254207
YP_735765.1	CDS	Shewmr4_3644	NC_008321.1	4354933	4355238	R	KEGG: son:SO0331 hypothetical protein; hypothetical protein	complement(4354933..4355238)	Shewanella sp. MR-4	4254208
YP_735766.1	CDS	Shewmr4_3645	NC_008321.1	4355238	4356692	R	PFAM: protein of unknown function UPF0061; KEGG: son:SO0330 hypothetical protein; hypothetical protein	complement(4355238..4356692)	Shewanella sp. MR-4	4254209
YP_735767.1	CDS	Shewmr4_3646	NC_008321.1	4356704	4357054	R	KEGG: son:SO0329 hypothetical protein; hypothetical protein	complement(4356704..4357054)	Shewanella sp. MR-4	4254210
YP_735768.1	CDS	Shewmr4_3647	NC_008321.1	4357232	4358149	R	KEGG: son:SO0326 hypothetical protein; hypothetical protein	complement(4357232..4358149)	Shewanella sp. MR-4	4254211
YP_735769.1	CDS	Shewmr4_3648	NC_008321.1	4358401	4358760	D	PFAM: DsrE family protein; KEGG: son:SO0325 DsrE-related protein; DsrE family protein	4358401..4358760	Shewanella sp. MR-4	4254212
YP_735770.1	CDS	Shewmr4_3649	NC_008321.1	4358865	4359266	D	KEGG: son:SO0324 hypothetical protein; hypothetical protein	4358865..4359266	Shewanella sp. MR-4	4254213
YP_735771.1	CDS	Shewmr4_3650	NC_008321.1	4359322	4360254	D	KEGG: son:SO0323 hypothetical protein; hypothetical protein	4359322..4360254	Shewanella sp. MR-4	4254214
YP_735772.1	CDS	Shewmr4_3651	NC_008321.1	4360385	4360966	D	KEGG: son:SO0322 hypothetical protein; hypothetical protein	4360385..4360966	Shewanella sp. MR-4	4254215
YP_735773.1	CDS	Shewmr4_3652	NC_008321.1	4361044	4361658	R	KEGG: son:SO0321 hypothetical protein; hypothetical protein	complement(4361044..4361658)	Shewanella sp. MR-4	4254216
YP_735774.1	CDS	Shewmr4_3653	NC_008321.1	4361735	4362772	R	PFAM: acyltransferase 3; KEGG: son:SO0320 hypothetical protein; acyltransferase 3	complement(4361735..4362772)	Shewanella sp. MR-4	4254217
YP_735775.1	CDS	Shewmr4_3654	NC_008321.1	4362774	4364189	R	KEGG: son:SO0319 hypothetical protein; hypothetical protein	complement(4362774..4364189)	Shewanella sp. MR-4	4254218
YP_735776.1	CDS	Shewmr4_3655	NC_008321.1	4364350	4364700	R	PFAM: protein of unknown function DUF1232; KEGG: son:SO0318 hypothetical protein; hypothetical protein	complement(4364350..4364700)	Shewanella sp. MR-4	4254219
YP_735777.1	CDS	Shewmr4_3656	NC_008321.1	4364913	4365836	D	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase; IS4 family transposase	4364913..4365836	Shewanella sp. MR-4	4254220
YP_735778.1	CDS	Shewmr4_3657	NC_008321.1	4366219	4367181	D	PFAM: regulatory protein, LysR; KEGG: vpa:VPA0299 putative transcription regulator protein; LysR family transcriptional regulator	4366219..4367181	Shewanella sp. MR-4	4254221
YP_735779.1	CDS	Shewmr4_3658	NC_008321.1	4367392	4368828	D	PFAM: Disulphide bond formation protein DsbB; KEGG: hpj:jhp0542 hypothetical protein; disulfide bond formation protein DsbB	4367392..4368828	Shewanella sp. MR-4	4254222
YP_735780.1	CDS	Shewmr4_3659	NC_008321.1	4368940	4371141	D	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY4603 putative anaerobic dehydrogenase; twin-arginine translocation pathway signal	4368940..4371141	Shewanella sp. MR-4	4254223
YP_735781.1	CDS	Shewmr4_3660	NC_008321.1	4371153	4371701	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY4602 putative oxidoreductase iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	4371153..4371701	Shewanella sp. MR-4	4254224
YP_735782.1	CDS	Shewmr4_3661	NC_008321.1	4371698	4372330	D	PFAM: cytoplasmic chaperone TorD family protein; KEGG: dsy:DSY4608 uncharacterized component of anaerobic dehydrogenase; cytoplasmic chaperone TorD family protein	4371698..4372330	Shewanella sp. MR-4	4254225
YP_735783.1	CDS	Shewmr4_3662	NC_008321.1	4372340	4373305	D	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO4515 formate dehydrogenase, C subunit, putative; formate dehydrogenase subunit gamma	4372340..4373305	Shewanella sp. MR-4	4254226
YP_735784.1	CDS	Shewmr4_3663	NC_008321.1	4373462	4374508	D	PFAM: porin, Gram-negative type; KEGG: cps:CPS_3847 porin; porin	4373462..4374508	Shewanella sp. MR-4	4254227
YP_735785.1	CDS	Shewmr4_3665	NC_008321.1	4375331	4375879	R	TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: son:SO0316 hypothetical phosphatidylethanolamine-binding protein; PBP family phospholipid-binding protein	complement(4375331..4375879)	Shewanella sp. MR-4	4254228
YP_735786.1	CDS	Shewmr4_3666	NC_008321.1	4376359	4376463	D	KEGG: vch:VCA1065 hypothetical protein; hypothetical protein	4376359..4376463	Shewanella sp. MR-4	4254229
YP_735787.1	CDS	Shewmr4_3667	NC_008321.1	4376775	4378937	D	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: son:SO0314 ornithine decarboxylase, inducible; ornithine decarboxylase	4376775..4378937	Shewanella sp. MR-4	4254230
YP_735788.1	CDS	potE	NC_008321.1	4379023	4380342	D	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter	4379023..4380342	Shewanella sp. MR-4	4254231
YP_735789.1	CDS	Shewmr4_3669	NC_008321.1	4380467	4381621	D	PFAM: porin, Gram-negative type; KEGG: son:SO0312 outer membrane porin, putative; porin	4380467..4381621	Shewanella sp. MR-4	4254232
YP_735790.1	CDS	Shewmr4_3670	NC_008321.1	4381823	4384168	R	PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: son:SO0311 hypothetical Fe-S oxidoreductase; hypothetical protein	complement(4381823..4384168)	Shewanella sp. MR-4	4254233
YP_735791.1	CDS	Shewmr4_3671	NC_008321.1	4384381	4384779	R	KEGG: son:SO0309 hypothetical protein; hypothetical protein	complement(4384381..4384779)	Shewanella sp. MR-4	4254234
YP_735792.1	CDS	Shewmr4_3672	NC_008321.1	4384935	4386155	D	PFAM: protein of unknown function DUF1212; KEGG: son:SO0308 hypothetical protein; hypothetical protein	4384935..4386155	Shewanella sp. MR-4	4254235
YP_735793.1	CDS	Shewmr4_3673	NC_008321.1	4386329	4387969	D	KEGG: son:SO0306 hypothetical protein; hypothetical protein	4386329..4387969	Shewanella sp. MR-4	4254236
YP_735794.1	CDS	Shewmr4_3674	NC_008321.1	4388102	4388596	D	KEGG: son:SO0302 hypothetical protein; hypothetical protein	4388102..4388596	Shewanella sp. MR-4	4254237
YP_735795.1	CDS	Shewmr4_3675	NC_008321.1	4389116	4390063	D	TIGRFAM: cytochrome C family protein; KEGG: son:SO1427 decaheme cytochrome c; cytochrome C family protein	4389116..4390063	Shewanella sp. MR-4	4254238
YP_735796.1	CDS	Shewmr4_3676	NC_008321.1	4390074	4392077	D	KEGG: son:SO1428 outer membrane protein; outer membrane protein	4390074..4392077	Shewanella sp. MR-4	4254239
YP_735797.1	CDS	Shewmr4_3677	NC_008321.1	4392097	4394613	D	TIGRFAM: Twin-arginine translocation pathway signal; anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO1429 anaerobic dimethyl sulfoxide reductase, A subunit; anaerobic dimethyl sulfoxide reductase subunit A	4392097..4394613	Shewanella sp. MR-4	4254240
YP_735798.1	CDS	Shewmr4_3678	NC_008321.1	4394627	4395286	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1430 anaerobic dimethyl sulfoxide reductase, B subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	4394627..4395286	Shewanella sp. MR-4	4254241
YP_735799.1	CDS	Shewmr4_3679	NC_008321.1	4395299	4396012	D	PFAM: cytoplasmic chaperone TorD family protein; KEGG: son:SO1431 hypothetical protein; cytoplasmic chaperone TorD family protein	4395299..4396012	Shewanella sp. MR-4	4254242
YP_735800.1	CDS	Shewmr4_3680	NC_008321.1	4396043	4396492	D	KEGG: son:SO1432 hypothetical protein; hypothetical protein	4396043..4396492	Shewanella sp. MR-4	4254243
YP_735801.1	CDS	Shewmr4_3681	NC_008321.1	4396960	4398426	D	PFAM: KAP P-loop domain protein; KEGG: sdn:Sden_3419 kap P-loop; KAP P-loop domain-containing protein	4396960..4398426	Shewanella sp. MR-4	4254244
YP_735802.1	CDS	Shewmr4_3682	NC_008321.1	4398588	4400048	R	KEGG: vpa:VP0643 hypothetical protein; hypothetical protein	complement(4398588..4400048)	Shewanella sp. MR-4	4254245
YP_735803.1	CDS	Shewmr4_3683	NC_008321.1	4400550	4401395	R	TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: son:SO0301 hypothetical methyltransferase; hypothetical protein	complement(4400550..4401395)	Shewanella sp. MR-4	4254246
YP_735804.1	CDS	Shewmr4_3684	NC_008321.1	4401484	4403367	D	PFAM: LppC family lipoprotein; KEGG: son:SO0300 lipoprotein, putative; LppC family lipoprotein	4401484..4403367	Shewanella sp. MR-4	4254247
YP_735805.1	CDS	Shewmr4_3685	NC_008321.1	4403364	4403690	D	PFAM: protein of unknown function UPF0102; KEGG: son:SO0299 predicted endonuclease; hypothetical protein	4403364..4403690	Shewanella sp. MR-4	4254248
YP_735806.1	CDS	Shewmr4_3686	NC_008321.1	4403797	4404390	D	TIGRFAM: phosphoheptose isomerase; KEGG: son:SO0298 phosphoheptose isomerase; phosphoheptose isomerase	4403797..4404390	Shewanella sp. MR-4	4254249
YP_735807.1	CDS	Shewmr4_3687	NC_008321.1	4404387	4404953	D	PFAM: transport-associated; KEGG: son:SO0297 lipoprotein, putative; transport-associated	4404387..4404953	Shewanella sp. MR-4	4254250
YP_735808.1	CDS	Shewmr4_3688	NC_008321.1	4404972	4405892	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO0296 integral membrane domain protein; hypothetical protein	complement(4404972..4405892)	Shewanella sp. MR-4	4254251
YP_735809.1	CDS	Shewmr4_3689	NC_008321.1	4406013	4406885	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0295 transcriptional regulator, LysR family; LysR family transcriptional regulator	4406013..4406885	Shewanella sp. MR-4	4254252
YP_735810.1	CDS	Shewmr4_3690	NC_008321.1	4406988	4407986	R	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase	complement(4406988..4407986)	Shewanella sp. MR-4	4254253
YP_735811.1	CDS	Shewmr4_3691	NC_008321.1	4408024	4408707	R	KEGG: son:SO0293 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase	complement(4408024..4408707)	Shewanella sp. MR-4	4254254
YP_735812.1	CDS	Shewmr4_3692	NC_008321.1	4408707	4409384	R	KEGG: son:SO0292 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; ribulose-5-phosphate 3-epimerase	complement(4408707..4409384)	Shewanella sp. MR-4	4254255
YP_735813.1	CDS	Shewmr4_3693	NC_008321.1	4409647	4410012	D	KEGG: son:SO0291 hypothetical protein; hypothetical protein	4409647..4410012	Shewanella sp. MR-4	4254256
YP_735814.1	CDS	Shewmr4_3694	NC_008321.1	4410012	4410197	D	KEGG: son:SO0290 hypothetical protein; hypothetical protein	4410012..4410197	Shewanella sp. MR-4	4254257
YP_735815.1	CDS	Shewmr4_3695	NC_008321.1	4410222	4411061	R	KEGG: son:SO0289 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase	complement(4410222..4411061)	Shewanella sp. MR-4	4254258
YP_735816.1	CDS	Shewmr4_3696	NC_008321.1	4411110	4412525	R	PFAM: Sporulation domain protein; SMART: AAA ATPase; KEGG: son:SO0288 DamX domain protein; sporulation domain-containing protein	complement(4411110..4412525)	Shewanella sp. MR-4	4254259
YP_735817.1	CDS	aroB	NC_008321.1	4412544	4413623	R	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase	complement(4412544..4413623)	Shewanella sp. MR-4	4254260
YP_735818.1	CDS	aroK	NC_008321.1	4413629	4414144	R	type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I	complement(4413629..4414144)	Shewanella sp. MR-4	4254261
YP_735819.1	CDS	Shewmr4_3699	NC_008321.1	4414364	4416418	R	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain protein; KEGG: son:SO0285 type IV pilus biogenesis protein PilQ; type IV pilus secretin PilQ	complement(4414364..4416418)	Shewanella sp. MR-4	4254262
YP_735820.1	CDS	Shewmr4_3700	NC_008321.1	4416440	4416955	R	PFAM: Pilus assembly protein, PilQ; KEGG: son:SO0284 type IV pilus biogenesis protein PilP; pilus assembly protein, PilQ	complement(4416440..4416955)	Shewanella sp. MR-4	4254263
YP_735821.1	CDS	Shewmr4_3701	NC_008321.1	4416955	4417581	R	PFAM: Pilus assembly protein, PilO; KEGG: son:SO0283 type IV pilus biogenesis protein PilO; pilus assembly protein, PilO	complement(4416955..4417581)	Shewanella sp. MR-4	4254264
YP_735822.1	CDS	Shewmr4_3702	NC_008321.1	4417578	4418162	R	PFAM: Fimbrial assembly family protein; KEGG: son:SO0282 type IV pilus biogenesis protein PilN; fimbrial assembly family protein	complement(4417578..4418162)	Shewanella sp. MR-4	4254265
YP_735823.1	CDS	Shewmr4_3703	NC_008321.1	4418150	4419229	R	TIGRFAM: type IV pilus assembly protein PilM; KEGG: son:SO0281 type IV pilus biogenesis protein PilM; type IV pilus assembly protein PilM	complement(4418150..4419229)	Shewanella sp. MR-4	4254266
YP_735824.1	CDS	Shewmr4_3704	NC_008321.1	4419421	4421940	D	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: son:SO0280 penicillin-binding protein 1A; 1A family penicillin-binding protein	4419421..4421940	Shewanella sp. MR-4	4254267
YP_735825.1	CDS	Shewmr4_3705	NC_008321.1	4422001	4423368	R	catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase	complement(4422001..4423368)	Shewanella sp. MR-4	4254268
YP_735826.1	CDS	Shewmr4_3706	NC_008321.1	4423452	4424675	R	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase	complement(4423452..4424675)	Shewanella sp. MR-4	4254269
YP_735827.1	CDS	Shewmr4_3707	NC_008321.1	4424736	4425641	R	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase	complement(4424736..4425641)	Shewanella sp. MR-4	4254270
YP_735828.1	CDS	Shewmr4_3708	NC_008321.1	4425654	4426436	R	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase	complement(4425654..4426436)	Shewanella sp. MR-4	4254271
YP_735829.1	CDS	argC	NC_008321.1	4426468	4427448	R	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase	complement(4426468..4427448)	Shewanella sp. MR-4	4254272
YP_735830.1	CDS	Shewmr4_3710	NC_008321.1	4428114	4430783	D	catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase	4428114..4430783	Shewanella sp. MR-4	4254273
YP_735831.1	CDS	Shewmr4_3711	NC_008321.1	4430783	4431328	D	PFAM: protein of unknown function DUF1439; KEGG: son:SO0273 hypothetical protein; hypothetical protein	4430783..4431328	Shewanella sp. MR-4	4254274
YP_735832.1	CDS	Shewmr4_3712	NC_008321.1	4431427	4432704	R	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: son:SO0272 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA	complement(4431427..4432704)	Shewanella sp. MR-4	4254275
YP_735833.1	CDS	Shewmr4_3713	NC_008321.1	4438748	4439653	R	TIGRFAM: DNA binding domain, excisionase family; KEGG: son:SO4502 hypothetical protein; DNA binding domain-containing protein	complement(4438748..4439653)	Shewanella sp. MR-4	4254276
YP_735834.1	CDS	Shewmr4_3714	NC_008321.1	4439710	4440606	R	PFAM: formate dehydrogenase, subunit FdhD; KEGG: son:SO4503 formate dehydrogenase accessory protein FdhD, putative; formate dehydrogenase subunit FdhD	complement(4439710..4440606)	Shewanella sp. MR-4	4254277
YP_735835.1	CDS	Shewmr4_3715	NC_008321.1	4440903	4441367	D	KEGG: son:SO4504 hypothetical protein; hypothetical protein	4440903..4441367	Shewanella sp. MR-4	4254278
YP_735836.1	CDS	Shewmr4_3716	NC_008321.1	4441367	4442023	D	KEGG: son:SO4505 hypothetical protein; hypothetical protein	4441367..4442023	Shewanella sp. MR-4	4254279
YP_735837.1	CDS	Shewmr4_3717	NC_008321.1	4442210	4443871	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4506 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	4442210..4443871	Shewanella sp. MR-4	4254280
YP_735838.1	CDS	Shewmr4_3718	NC_008321.1	4443882	4444559	D	PFAM: cytoplasmic chaperone TorD family protein; KEGG: son:SO4507 TorA specific chaperone, putative; cytoplasmic chaperone TorD family protein	4443882..4444559	Shewanella sp. MR-4	4254281
YP_735839.1	CDS	Shewmr4_3719	NC_008321.1	4444726	4444923	D	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: son:SO4508 hypothetical protein; twin-arginine translocation pathway signal	4444726..4444923	Shewanella sp. MR-4	4254282
YP_735840.1	CDS	Shewmr4_3720	NC_008321.1	4444941	4447793	D	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4509 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha	4444941..4447793	Shewanella sp. MR-4	4254283
YP_735841.1	CDS	Shewmr4_3721	NC_008321.1	4447820	4448416	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4510 formate dehydrogenase, iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	4447820..4448416	Shewanella sp. MR-4	4254284
YP_735842.1	CDS	Shewmr4_3722	NC_008321.1	4448466	4449494	D	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO4511 formate dehydrogenase, C subunit, putative; formate dehydrogenase subunit gamma	4448466..4449494	Shewanella sp. MR-4	4254285
YP_735843.1	CDS	Shewmr4_3723	NC_008321.1	4449873	4450073	D	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: son:SO4512 hypothetical protein; twin-arginine translocation pathway signal	4449873..4450073	Shewanella sp. MR-4	4254286
YP_735844.1	CDS	Shewmr4_3724	NC_008321.1	4450091	4452943	D	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4513 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha	4450091..4452943	Shewanella sp. MR-4	4254287
YP_735845.1	CDS	Shewmr4_3725	NC_008321.1	4452973	4453542	D	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4514 formate dehydrogenase, iron-sulfur subunit; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	4452973..4453542	Shewanella sp. MR-4	4254288
YP_735846.1	CDS	Shewmr4_3726	NC_008321.1	4453619	4454602	D	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO4515 formate dehydrogenase, C subunit, putative; formate dehydrogenase subunit gamma	4453619..4454602	Shewanella sp. MR-4	4254289
YP_735847.1	CDS	Shewmr4_3727	NC_008321.1	4454683	4456740	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4516 ferric vibriobactin receptor; TonB-dependent receptor	complement(4454683..4456740)	Shewanella sp. MR-4	4254290
YP_735848.1	CDS	Shewmr4_3728	NC_008321.1	4457300	4458883	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRB0028 hypothetical methyl-accepting chemotaxisprotein; methyl-accepting chemotaxis sensory transducer	4457300..4458883	Shewanella sp. MR-4	4254291
YP_735849.1	CDS	Shewmr4_3729	NC_008321.1	4459387	4460316	R	PFAM: Bile acid:sodium symporter; KEGG: son:SO4519 sodium-dependent transporter; bile acid:sodium symporter	complement(4459387..4460316)	Shewanella sp. MR-4	4254292
YP_735850.1	CDS	Shewmr4_3730	NC_008321.1	4460703	4462040	D	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	4460703..4462040	Shewanella sp. MR-4	4254293
YP_735851.1	CDS	Shewmr4_3731	NC_008321.1	4462156	4462389	D	KEGG: son:SO4521 hypothetical protein; hypothetical protein	4462156..4462389	Shewanella sp. MR-4	4254294
YP_735852.1	CDS	Shewmr4_3732	NC_008321.1	4462418	4463353	D	KEGG: son:SO4522 hypothetical protein; hypothetical protein	4462418..4463353	Shewanella sp. MR-4	4254295
YP_735853.1	CDS	Shewmr4_3733	NC_008321.1	4463530	4464402	D	PFAM: Patatin; KEGG: son:SO4525 hypothetical protein; patatin	4463530..4464402	Shewanella sp. MR-4	4254296
YP_735854.1	CDS	Shewmr4_3734	NC_008321.1	4464395	4465330	R	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO4525.1 hypothetical transcriptional regulator, LysR family; LysR family transcriptional regulator	complement(4464395..4465330)	Shewanella sp. MR-4	4254297
YP_735855.1	CDS	Shewmr4_3735	NC_008321.1	4465331	4466185	R	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4527 integral membrane domain protein; hypothetical protein	complement(4465331..4466185)	Shewanella sp. MR-4	4254298
YP_735856.1	CDS	Shewmr4_3736	NC_008321.1	4466383	4466847	D	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO4529 RNA methyltransferase, TrmH family, group 2; RNA methyltransferase	4466383..4466847	Shewanella sp. MR-4	4254299
YP_735857.1	CDS	Shewmr4_3737	NC_008321.1	4467402	4468280	D	KEGG: chy:CHY_2509 hypothetical protein; hypothetical protein	4467402..4468280	Shewanella sp. MR-4	4254300
YP_735858.1	CDS	Shewmr4_3738	NC_008321.1	4468314	4469174	D	KEGG: csa:Csal_2904 hypothetical protein; hypothetical protein	4468314..4469174	Shewanella sp. MR-4	4254301
YP_735859.1	CDS	Shewmr4_3739	NC_008321.1	4469294	4469848	R	KEGG: son:SO4535 hypothetical protein; hypothetical protein	complement(4469294..4469848)	Shewanella sp. MR-4	4254302
YP_735860.1	CDS	Shewmr4_3740	NC_008321.1	4470075	4472120	D	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: son:SO4537 peptidase, putative; peptidase S9 prolyl oligopeptidase	4470075..4472120	Shewanella sp. MR-4	4254303
YP_735861.1	CDS	Shewmr4_3741	NC_008321.1	4472195	4473655	R	PFAM: peptidase M16 domain protein; KEGG: sdn:Sden_3485 peptidase M16-like protein; peptidase M16 domain-containing protein	complement(4472195..4473655)	Shewanella sp. MR-4	4254304
YP_735862.1	CDS	Shewmr4_3742	NC_008321.1	4473652	4474983	R	PFAM: peptidase M16 domain protein; KEGG: son:SO4537.2 hypothetical Zn-dependent peptidase; peptidase M16 domain-containing protein	complement(4473652..4474983)	Shewanella sp. MR-4	4254305
YP_735863.1	CDS	Shewmr4_3743	NC_008321.1	4475121	4476518	R	KEGG: sdn:Sden_3487 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; carboxypeptidase	complement(4475121..4476518)	Shewanella sp. MR-4	4254306
YP_735864.1	CDS	Shewmr4_3744	NC_008321.1	4476839	4477834	D	KEGG: rfr:Rfer_3046 transcriptional factor; hypothetical protein	4476839..4477834	Shewanella sp. MR-4	4254307
YP_735865.1	CDS	Shewmr4_3745	NC_008321.1	4477916	4479052	D	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: noc:Noc_2855 cell division protein FtsZ; cell division protein FtsZ	4477916..4479052	Shewanella sp. MR-4	4254308
YP_735866.1	CDS	Shewmr4_3746	NC_008321.1	4479069	4479707	R	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4550 methyltransferase domain protein; type 12 methyltransferase	complement(4479069..4479707)	Shewanella sp. MR-4	4254309
YP_735867.1	CDS	Shewmr4_3747	NC_008321.1	4479770	4480123	R	KEGG: son:SO4551 hypothetical protein; hypothetical protein	complement(4479770..4480123)	Shewanella sp. MR-4	4254310
YP_735868.1	CDS	Shewmr4_3748	NC_008321.1	4480415	4482535	D	KEGG: son:SO4552 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)	4480415..4482535	Shewanella sp. MR-4	4254311
YP_735869.1	CDS	Shewmr4_3749	NC_008321.1	4482803	4483369	R	PFAM: DTW domain containing protein; KEGG: son:SO4554 hypothetical protein; DTW domain-containing protein	complement(4482803..4483369)	Shewanella sp. MR-4	4254312
YP_735870.1	CDS	Shewmr4_3750	NC_008321.1	4483531	4484739	R	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4555 drug resistance transporter, Bcr/CflA family protein; Bcr/CflA subfamily drug resistance transporter	complement(4483531..4484739)	Shewanella sp. MR-4	4254313
YP_735871.1	CDS	Shewmr4_3751	NC_008321.1	4484855	4485814	D	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO4556 transcriptional regulator, LysR family; LysR family transcriptional regulator	4484855..4485814	Shewanella sp. MR-4	4254314
YP_735872.1	CDS	Shewmr4_3752	NC_008321.1	4485877	4487748	R	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: son:SO4557 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	complement(4485877..4487748)	Shewanella sp. MR-4	4254315
YP_735873.1	CDS	Shewmr4_3753	NC_008321.1	4488182	4488517	D	KEGG: son:SO4558 hypothetical protein; hypothetical protein	4488182..4488517	Shewanella sp. MR-4	4254316
YP_735874.1	CDS	Shewmr4_3754	NC_008321.1	4488520	4489977	R	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO4559 hypothetical protein; Sel1 domain-containing protein	complement(4488520..4489977)	Shewanella sp. MR-4	4254317
YP_735875.1	CDS	Shewmr4_3755	NC_008321.1	4490014	4490721	R	KEGG: son:SO4560 hypothetical protein; hypothetical protein	complement(4490014..4490721)	Shewanella sp. MR-4	4254318
YP_735876.1	CDS	Shewmr4_3756	NC_008321.1	4490912	4491439	D	KEGG: son:SO4561 hypothetical protein; hypothetical protein	4490912..4491439	Shewanella sp. MR-4	4254319
YP_735877.1	CDS	Shewmr4_3757	NC_008321.1	4491536	4491997	D	PFAM: protein of unknown function DUF1332; KEGG: son:SO4562 hypothetical protein; hypothetical protein	4491536..4491997	Shewanella sp. MR-4	4254320
YP_735878.1	CDS	Shewmr4_3758	NC_008321.1	4492086	4492910	R	KEGG: son:SO4563 hypothetical protein; putative signal transduction protein	complement(4492086..4492910)	Shewanella sp. MR-4	4254321
YP_735879.1	CDS	Shewmr4_3759	NC_008321.1	4493206	4493817	D	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: son:SO4564 TonB2 protein, putative; TonB family protein	4493206..4493817	Shewanella sp. MR-4	4254322
YP_735880.1	CDS	Shewmr4_3760	NC_008321.1	4493890	4495158	R	uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH	complement(4493890..4495158)	Shewanella sp. MR-4	4254323
YP_735881.1	CDS	Shewmr4_3761	NC_008321.1	4495386	4495817	D	PFAM: regulatory protein, AsnC/Lrp family; KEGG: son:SO4567 transcriptional regulator, AsnC family; AsnC family transcriptional regulator	4495386..4495817	Shewanella sp. MR-4	4254324
YP_735882.1	CDS	Shewmr4_3762	NC_008321.1	4496082	4497023	R	PFAM: Polysulphide reductase, NrfD; KEGG: son:SO4568 formate-dependent nitrite reductase, nrfD protein; polysulfide reductase, NrfD	complement(4496082..4497023)	Shewanella sp. MR-4	4254325
YP_735883.1	CDS	Shewmr4_3763	NC_008321.1	4497020	4497706	R	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: vvy:VV1252 formate-dependent nitrite reductase complex, Fe-S protein; twin-arginine translocation pathway signal	complement(4497020..4497706)	Shewanella sp. MR-4	4254326
YP_735884.1	CDS	Shewmr4_3764	NC_008321.1	4497711	4498175	R	KEGG: sfx:S3598 formate-dependent nitrite reductase; formate-dependent nitrite reductase	complement(4497711..4498175)	Shewanella sp. MR-4	4254327
YP_735885.1	CDS	Shewmr4_3765	NC_008321.1	4498253	4498726	R	hypothetical protein	complement(4498253..4498726)	Shewanella sp. MR-4	4254328
YP_735886.1	CDS	Shewmr4_3766	NC_008321.1	4499141	4500109	D	PFAM: regulatory protein, LysR; KEGG: son:SO4571 transcriptional regulator, LysR family; LysR family transcriptional regulator	4499141..4500109	Shewanella sp. MR-4	4254329
YP_735887.1	CDS	Shewmr4_3767	NC_008321.1	4500284	4502005	D	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase	4500284..4502005	Shewanella sp. MR-4	4254330
YP_735888.1	CDS	Shewmr4_3768	NC_008321.1	4502005	4502808	D	PFAM: alpha/beta hydrolase fold; KEGG: son:SO4574 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein	4502005..4502808	Shewanella sp. MR-4	4254331
YP_735889.1	CDS	Shewmr4_3769	NC_008321.1	4502831	4503880	D	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase	4502831..4503880	Shewanella sp. MR-4	4254332
YP_735890.1	CDS	Shewmr4_3770	NC_008321.1	4503887	4505362	D	TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO4576 O-succinylbenzoic acid--CoA ligase; O-succinylbenzoate-CoA ligase	4503887..4505362	Shewanella sp. MR-4	4254333
YP_735891.1	CDS	Shewmr4_3771	NC_008321.1	4505434	4506291	R	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32	complement(4505434..4506291)	Shewanella sp. MR-4	4254334
YP_735892.1	CDS	Shewmr4_3772	NC_008321.1	4506522	4507487	R	PFAM: protein of unknown function DUF214; KEGG: son:SO4584 cell division ABC transporter, permease protein FtsX; cell division protein FtsX	complement(4506522..4507487)	Shewanella sp. MR-4	4254335
YP_735893.1	CDS	Shewmr4_3773	NC_008321.1	4507484	4508185	R	KEGG: son:SO4585 cell division ABC transporter, ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE	complement(4507484..4508185)	Shewanella sp. MR-4	4254336
YP_735894.1	CDS	Shewmr4_3774	NC_008321.1	4508189	4509937	R	KEGG: son:SO4586 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase; signal recognition particle-docking protein FtsY	complement(4508189..4509937)	Shewanella sp. MR-4	4254337
YP_735895.1	CDS	Shewmr4_3775	NC_008321.1	4510151	4510798	D	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: son:SO4587 putative methylase; putative methyltransferase	4510151..4510798	Shewanella sp. MR-4	4254338
YP_735896.1	CDS	Shewmr4_3776	NC_008321.1	4510800	4511075	D	PFAM: protein of unknown function DUF1145; KEGG: son:SO4588 hypothetical protein; hypothetical protein	4510800..4511075	Shewanella sp. MR-4	4254339
YP_735897.1	CDS	Shewmr4_3777	NC_008321.1	4511146	4511709	R	PFAM: NapC/NirT cytochrome c domain protein; KEGG: son:SO4591 tetraheme cytochrome c; NapC/NirT cytochrome c domain-containing protein	complement(4511146..4511709)	Shewanella sp. MR-4	4254340
YP_735898.1	CDS	Shewmr4_3778	NC_008321.1	4512123	4512485	D	KEGG: son:SO4592 hypothetical protein; hypothetical protein	4512123..4512485	Shewanella sp. MR-4	4254341
YP_735899.1	CDS	Shewmr4_3779	NC_008321.1	4512588	4513043	D	KEGG: son:SO4593 hypothetical protein; hypothetical protein	4512588..4513043	Shewanella sp. MR-4	4254342
YP_735900.1	CDS	Shewmr4_3780	NC_008321.1	4513116	4513592	D	KEGG: son:SO4594 hypothetical protein; hypothetical protein	4513116..4513592	Shewanella sp. MR-4	4254343
YP_735901.1	CDS	Shewmr4_3781	NC_008321.1	4513770	4514072	D	KEGG: son:SO4596 copper-transporting ATPase domain protein; copper-transporting ATPase domain-containing protein	4513770..4514072	Shewanella sp. MR-4	4254344
YP_735902.1	CDS	Shewmr4_3782	NC_008321.1	4514094	4515602	D	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO4597 heavy metal efflux system protein, putative; RND family efflux transporter MFP subunit	4514094..4515602	Shewanella sp. MR-4	4254345
YP_735903.1	CDS	Shewmr4_3783	NC_008321.1	4515612	4518749	D	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: son:SOA0153 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein	4515612..4518749	Shewanella sp. MR-4	4254346
YP_735904.1	CDS	Shewmr4_3784	NC_008321.1	4518928	4520085	D	PFAM: ribonuclease T2; KEGG: son:SO4599 ribonuclease, T2 family; ribonuclease T2	4518928..4520085	Shewanella sp. MR-4	4254347
YP_735905.1	CDS	Shewmr4_3785	NC_008321.1	4520312	4522273	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: vvy:VV1004 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	4520312..4522273	Shewanella sp. MR-4	4254348
YP_735906.1	CDS	Shewmr4_3786	NC_008321.1	4522386	4523162	R	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO4600 antigen, putative; glyoxalase/bleomycin resistance protein/dioxygenase	complement(4522386..4523162)	Shewanella sp. MR-4	4254349
YP_735907.1	CDS	Shewmr4_3787	NC_008321.1	4523295	4524551	R	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: son:SO4601 tryptophan-specific transport protein; aromatic amino acid transporter	complement(4523295..4524551)	Shewanella sp. MR-4	4254350
YP_735908.1	CDS	Shewmr4_3788	NC_008321.1	4524551	4526974	R	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase	complement(4524551..4526974)	Shewanella sp. MR-4	4254351
YP_735909.1	CDS	Shewmr4_3789	NC_008321.1	4527136	4527756	D	Represses a number of genes involved in the response to DNA damage; LexA repressor	4527136..4527756	Shewanella sp. MR-4	4254352
YP_735910.1	CDS	Shewmr4_3790	NC_008321.1	4527753	4528265	D	KEGG: son:SO4604 hypothetical protein; hypothetical protein	4527753..4528265	Shewanella sp. MR-4	4254353
YP_735911.1	CDS	Shewmr4_3791	NC_008321.1	4528673	4530214	D	PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; KEGG: son:SO4606 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II	4528673..4530214	Shewanella sp. MR-4	4254354
YP_735912.1	CDS	Shewmr4_3792	NC_008321.1	4530224	4531816	D	PFAM: cytochrome c oxidase, subunit I; KEGG: son:SO4607 cytochrome c oxidase, subunit I; cytochrome-c oxidase	4530224..4531816	Shewanella sp. MR-4	4254355
YP_735913.1	CDS	Shewmr4_3793	NC_008321.1	4531818	4532399	D	involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein	4531818..4532399	Shewanella sp. MR-4	4254356
YP_735914.1	CDS	Shewmr4_3794	NC_008321.1	4532396	4533271	D	PFAM: cytochrome c oxidase, subunit III; KEGG: son:SO4609 cytochrome c oxidase subunit III; cytochrome c oxidase subunit III	4532396..4533271	Shewanella sp. MR-4	4254357
YP_735915.1	CDS	Shewmr4_3795	NC_008321.1	4533300	4533446	R	KEGG: son:SO4610 hypothetical protein; hypothetical protein	complement(4533300..4533446)	Shewanella sp. MR-4	4254358
YP_735916.1	CDS	Shewmr4_3796	NC_008321.1	4533475	4534386	D	KEGG: son:SO4611 hypothetical protein; hypothetical protein	4533475..4534386	Shewanella sp. MR-4	4254359
YP_735917.1	CDS	Shewmr4_3797	NC_008321.1	4534454	4534999	D	KEGG: son:SO4612 hypothetical protein; hypothetical protein	4534454..4534999	Shewanella sp. MR-4	4254360
YP_735918.1	CDS	Shewmr4_3798	NC_008321.1	4534999	4536057	D	PFAM: cytochrome oxidase assembly; KEGG: son:SO4613 cytochrome oxidase assembly protein, putative; cytochrome oxidase assembly	4534999..4536057	Shewanella sp. MR-4	4254361
YP_735919.1	CDS	Shewmr4_3799	NC_008321.1	4536075	4536977	D	converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase	4536075..4536977	Shewanella sp. MR-4	4254362
YP_735920.1	CDS	Shewmr4_3800	NC_008321.1	4537002	4537661	D	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: son:SO4615 SCO1/SenC family protein; electron transport protein SCO1/SenC	4537002..4537661	Shewanella sp. MR-4	4254363
YP_735921.1	CDS	Shewmr4_3801	NC_008321.1	4537676	4538722	R	PFAM: polysaccharide deacetylase; KEGG: son:SO4616 polysaccharide deacetylase family protein; polysaccharide deacetylase	complement(4537676..4538722)	Shewanella sp. MR-4	4254364
YP_735922.1	CDS	Shewmr4_3802	NC_008321.1	4538745	4540112	D	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO4617 DNA-damage-inducible protein F; MATE efflux family protein	4538745..4540112	Shewanella sp. MR-4	4254365
YP_735923.1	CDS	Shewmr4_3803	NC_008321.1	4540190	4542127	D	PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; phospholipase/Carboxylesterase; KEGG: son:SO4618 prolyl oligopeptidase family protein; peptidase S9 prolyl oligopeptidase	4540190..4542127	Shewanella sp. MR-4	4254366
YP_735924.1	CDS	Shewmr4_3804	NC_008321.1	4542191	4542769	R	cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein	complement(4542191..4542769)	Shewanella sp. MR-4	4254367
YP_735925.1	CDS	Shewmr4_3805	NC_008321.1	4542937	4543743	R	KEGG: son:SO4625 competence protein ComF; competence protein ComF	complement(4542937..4543743)	Shewanella sp. MR-4	4254368
YP_735926.1	CDS	Shewmr4_3806	NC_008321.1	4543769	4544563	D	TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: son:SO4626 bioH protein; bioH protein	4543769..4544563	Shewanella sp. MR-4	4254369
YP_735927.1	CDS	Shewmr4_3807	NC_008321.1	4544625	4545179	D	KEGG: son:SO4627 hypothetical protein; hypothetical protein	4544625..4545179	Shewanella sp. MR-4	4254370
YP_735928.1	CDS	Shewmr4_3808	NC_008321.1	4545246	4547210	R	PFAM: sulfatase; KEGG: son:SO4628 sulfatase; sulfatase	complement(4545246..4547210)	Shewanella sp. MR-4	4254371
YP_735929.1	CDS	Shewmr4_3809	NC_008321.1	4547428	4549767	R	PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: son:SO4629 hypothetical protein; RNA-binding S1 domain-containing protein	complement(4547428..4549767)	Shewanella sp. MR-4	4254372
YP_735930.1	CDS	Shewmr4_3810	NC_008321.1	4549897	4550400	R	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO4631 transcription elongation factor GreB; transcription elongation factor GreB	complement(4549897..4550400)	Shewanella sp. MR-4	4254373
YP_735931.1	CDS	ompR	NC_008321.1	4550774	4551499	D	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator	4550774..4551499	Shewanella sp. MR-4	4254374
YP_735932.1	CDS	envZ	NC_008321.1	4551539	4552855	D	membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein	4551539..4552855	Shewanella sp. MR-4	4254375
YP_735933.1	CDS	Shewmr4_3813	NC_008321.1	4552972	4554948	D	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4635 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer	4552972..4554948	Shewanella sp. MR-4	4254376
YP_735934.1	CDS	Shewmr4_3814	NC_008321.1	4555006	4555479	R	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO4640 antioxidant, AhpC/Tsa family; redoxin domain-containing protein	complement(4555006..4555479)	Shewanella sp. MR-4	4254377
YP_735935.1	CDS	Shewmr4_3815	NC_008321.1	4555740	4556672	R	KEGG: son:SO4645 hypothetical protein; hypothetical protein	complement(4555740..4556672)	Shewanella sp. MR-4	4254378
YP_735936.1	CDS	Shewmr4_3816	NC_008321.1	4557031	4557333	D	PFAM: Propeptide, PepSY amd peptidase M4; KEGG: son:SO4646 hypothetical protein; peptidase	4557031..4557333	Shewanella sp. MR-4	4254379
YP_735937.1	CDS	Shewmr4_3817	NC_008321.1	4557335	4558018	D	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4647 DNA-binding response regulator; two component transcriptional regulator	4557335..4558018	Shewanella sp. MR-4	4254380
YP_735938.1	CDS	Shewmr4_3818	NC_008321.1	4558011	4559375	D	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4648 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	4558011..4559375	Shewanella sp. MR-4	4254381
YP_735939.1	CDS	Shewmr4_3819	NC_008321.1	4559791	4561296	D	KEGG: son:SO4649 hypothetical protein; hypothetical protein	4559791..4561296	Shewanella sp. MR-4	4254382
YP_735940.1	CDS	Shewmr4_3820	NC_008321.1	4561352	4561828	R	KEGG: son:SO4656 hypothetical protein; hypothetical protein	complement(4561352..4561828)	Shewanella sp. MR-4	4254383
YP_735941.1	CDS	Shewmr4_3821	NC_008321.1	4561904	4565533	R	KEGG: son:SO4656.2 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s)	complement(4561904..4565533)	Shewanella sp. MR-4	4254384
YP_735942.1	CDS	Shewmr4_3822	NC_008321.1	4566166	4566486	D	hypothetical protein	4566166..4566486	Shewanella sp. MR-4	4254385
YP_735943.1	CDS	Shewmr4_3823	NC_008321.1	4566675	4567703	D	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase, subunit II; COX aromatic rich domain protein; KEGG: pha:PSHAa2231 ubiquinol oxidase polypeptide II (cytochrome o subunit 2) (oxidase BO(3) subunit 2) (cytochrome o ubiquinol oxidase subunit 2) (ubiquinol oxidase chain B); ubiquinol oxidase subunit II	4566675..4567703	Shewanella sp. MR-4	4254386
YP_735944.1	CDS	Shewmr4_3824	NC_008321.1	4567706	4569685	D	PFAM: cytochrome c oxidase, subunit I; KEGG: pha:PSHAa2230 ubiquinol oxidase polypeptide I (cytochrome o subunit 1) (oxidase BO(3) subunit 1) (cytochrome o ubiquinol oxidase subunit 1) (ubiquinol oxidase chain A); cytochrome-c oxidase	4567706..4569685	Shewanella sp. MR-4	4254387
YP_735945.1	CDS	Shewmr4_3825	NC_008321.1	4569687	4570307	D	PFAM: cytochrome c oxidase, subunit III; KEGG: pha:PSHAa2229 cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C); cytochrome c oxidase subunit III	4569687..4570307	Shewanella sp. MR-4	4254388
YP_735946.1	CDS	Shewmr4_3826	NC_008321.1	4570307	4570648	D	PFAM: cytochrome C oxidase subunit IV; KEGG: pha:PSHAa2228 cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D); cytochrome C oxidase subunit IV	4570307..4570648	Shewanella sp. MR-4	4254389
YP_735947.1	CDS	Shewmr4_3827	NC_008321.1	4570662	4571594	D	converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase	4570662..4571594	Shewanella sp. MR-4	4254390
YP_735948.1	CDS	Shewmr4_3828	NC_008321.1	4571704	4572489	R	PFAM: protein of unknown function DUF548; KEGG: sdn:Sden_3610 protein of unknown function DUF548; hypothetical protein	complement(4571704..4572489)	Shewanella sp. MR-4	4254391
YP_735949.1	CDS	Shewmr4_3829	NC_008321.1	4572641	4573486	D	PFAM: protein of unknown function DUF519; KEGG: son:SO4659 hypothetical protein; hypothetical protein	4572641..4573486	Shewanella sp. MR-4	4254392
YP_735950.1	CDS	Shewmr4_3830	NC_008321.1	4573586	4574305	R	PFAM: Lytic transglycosylase, catalytic; KEGG: son:SO4660 transglycosylase SLT domain protein; lytic transglycosylase, catalytic	complement(4573586..4574305)	Shewanella sp. MR-4	4254393
YP_735951.1	CDS	Shewmr4_3831	NC_008321.1	4574305	4575333	R	KEGG: son:SO4661 hypothetical protein; hypothetical protein	complement(4574305..4575333)	Shewanella sp. MR-4	4254394
YP_735952.1	CDS	Shewmr4_3832	NC_008321.1	4575384	4575950	R	PFAM: LemA family protein; KEGG: son:SO4662 lemA protein; LemA family protein	complement(4575384..4575950)	Shewanella sp. MR-4	4254395
YP_735953.1	CDS	Shewmr4_3833	NC_008321.1	4576417	4578024	D	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: ppr:PBPRA0142 putative efflux pump component MtrF; transporter AbgT	4576417..4578024	Shewanella sp. MR-4	4254396
YP_735954.1	CDS	Shewmr4_3834	NC_008321.1	4578117	4578416	R	hypothetical protein	complement(4578117..4578416)	Shewanella sp. MR-4	4254397
YP_735955.1	CDS	Shewmr4_3835	NC_008321.1	4578465	4578761	R	hypothetical protein	complement(4578465..4578761)	Shewanella sp. MR-4	4254398
YP_735956.1	CDS	Shewmr4_3836	NC_008321.1	4578873	4582007	R	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: son:SO4692 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein	complement(4578873..4582007)	Shewanella sp. MR-4	4254399
YP_735957.1	CDS	Shewmr4_3837	NC_008321.1	4582017	4583165	R	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO4693 multidrug resistance protein, AcrA/AcrE family; RND family efflux transporter MFP subunit	complement(4582017..4583165)	Shewanella sp. MR-4	4254400
YP_735958.1	CDS	Shewmr4_3838	NC_008321.1	4583987	4584733	D	TIGRFAM: conserved hypothetical protein; KEGG: son:SO4694 hypothetical protein; hypothetical protein	4583987..4584733	Shewanella sp. MR-4	4254401
YP_735959.1	CDS	Shewmr4_3839	NC_008321.1	4584836	4585525	R	KEGG: son:SO4696 hypothetical 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase	complement(4584836..4585525)	Shewanella sp. MR-4	4254402
YP_735960.1	CDS	Shewmr4_3840	NC_008321.1	4585733	4586380	D	PFAM: Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO4697 glutathione S-transferase; glutathione S-transferase domain-containing protein	4585733..4586380	Shewanella sp. MR-4	4254403
YP_735961.1	CDS	Shewmr4_3841	NC_008321.1	4586391	4586921	R	KEGG: son:SO4698 hypothetical protein; hypothetical protein	complement(4586391..4586921)	Shewanella sp. MR-4	4254404
YP_735962.1	CDS	Shewmr4_3842	NC_008321.1	4587051	4589090	R	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO4699 oligopeptidase A; oligopeptidase A	complement(4587051..4589090)	Shewanella sp. MR-4	4254405
YP_735963.1	CDS	Shewmr4_3843	NC_008321.1	4589300	4590136	D	KEGG: son:SO4700 hypothetical protein; hypothetical protein	4589300..4590136	Shewanella sp. MR-4	4254406
YP_735964.1	CDS	Shewmr4_3844	NC_008321.1	4590238	4590768	D	KEGG: son:SO4701 hypothetical protein; hypothetical protein	4590238..4590768	Shewanella sp. MR-4	4254407
YP_735965.1	CDS	Shewmr4_3845	NC_008321.1	4590936	4592291	D	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase	4590936..4592291	Shewanella sp. MR-4	4254408
YP_735966.1	CDS	Shewmr4_3846	NC_008321.1	4592657	4593478	D	KEGG: vfi:VFA0898 hypothetical protein; hypothetical protein	4592657..4593478	Shewanella sp. MR-4	4254409
YP_735967.1	CDS	Shewmr4_3847	NC_008321.1	4593935	4595431	D	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: sdn:Sden_0149 sodium/proline symporter; sodium/proline symporter	4593935..4595431	Shewanella sp. MR-4	4254410
YP_735968.1	CDS	Shewmr4_3848	NC_008321.1	4595441	4596547	D	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase	4595441..4596547	Shewanella sp. MR-4	4254411
YP_735969.1	CDS	Shewmr4_3849	NC_008321.1	4596559	4597806	D	TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: sdn:Sden_0151 gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase	4596559..4597806	Shewanella sp. MR-4	4254412
YP_735970.1	CDS	Shewmr4_3850	NC_008321.1	4597925	4598374	R	KEGG: cps:CPS_0896 hypothetical protein; hypothetical protein	complement(4597925..4598374)	Shewanella sp. MR-4	4254413
YP_735971.1	CDS	Shewmr4_3851	NC_008321.1	4598676	4600208	R	PFAM: helix-turn-helix domain protein; KEGG: son:SO4705 transcriptional regulator, putative; XRE family transcriptional regulator	complement(4598676..4600208)	Shewanella sp. MR-4	4254414
YP_735972.1	CDS	Shewmr4_3852	NC_008321.1	4600418	4600981	D	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase	4600418..4600981	Shewanella sp. MR-4	4254415
YP_735973.1	CDS	Shewmr4_3853	NC_008321.1	4601247	4602197	D	PFAM: conserved hypothetical protein 698; KEGG: son:SO4708 hypothetical protein; hypothetical protein	4601247..4602197	Shewanella sp. MR-4	4254416
YP_735974.1	CDS	Shewmr4_3854	NC_008321.1	4602247	4602399	R	KEGG: son:SO4709 hypothetical protein; hypothetical protein	complement(4602247..4602399)	Shewanella sp. MR-4	4254417
YP_735975.1	CDS	Shewmr4_3855	NC_008321.1	4602506	4603051	R	PFAM: regulatory protein, LuxR; KEGG: cps:CPS_1945 hypothetical protein; LuxR family transcriptional regulator	complement(4602506..4603051)	Shewanella sp. MR-4	4254418
YP_735976.1	CDS	Shewmr4_3856	NC_008321.1	4603196	4604398	D	KEGG: ilo:IL0061 outer membrane protein; hypothetical protein	4603196..4604398	Shewanella sp. MR-4	4254419
YP_735977.1	CDS	Shewmr4_3857	NC_008321.1	4604395	4605423	D	KEGG: cps:CPS_1944 hypothetical protein; hypothetical protein	4604395..4605423	Shewanella sp. MR-4	4254420
YP_735978.1	CDS	Shewmr4_3858	NC_008321.1	4605425	4608478	D	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: cps:CPS_1943 cation efflux system protein CzcA; CzcA family heavy metal efflux protein	4605425..4608478	Shewanella sp. MR-4	4254421
YP_735979.1	CDS	Shewmr4_3859	NC_008321.1	4608475	4608780	D	KEGG: cps:CPS_1942 hypothetical protein; hypothetical protein	4608475..4608780	Shewanella sp. MR-4	4254422
YP_735980.1	CDS	Shewmr4_3860	NC_008321.1	4608823	4609458	R	PFAM: Paraquat-inducible protein A; KEGG: son:SO4710 hypothetical protein; paraquat-inducible protein A	complement(4608823..4609458)	Shewanella sp. MR-4	4254423
YP_735981.1	CDS	Shewmr4_3861	NC_008321.1	4609563	4610798	R	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO4711 HD domain protein; metal dependent phosphohydrolase	complement(4609563..4610798)	Shewanella sp. MR-4	4254424
YP_735982.1	CDS	Shewmr4_3862	NC_008321.1	4610975	4611214	R	hypothetical protein	complement(4610975..4611214)	Shewanella sp. MR-4	4254425
YP_735983.1	CDS	Shewmr4_3863	NC_008321.1	4611222	4611959	R	KEGG: pca:Pcar_2393 hypothetical protein; hypothetical protein	complement(4611222..4611959)	Shewanella sp. MR-4	4254426
YP_735984.1	CDS	Shewmr4_3864	NC_008321.1	4611975	4612517	R	KEGG: pca:Pcar_2394 hypothetical protein; hypothetical protein	complement(4611975..4612517)	Shewanella sp. MR-4	4254427
YP_735985.1	CDS	Shewmr4_3865	NC_008321.1	4612514	4613197	R	PFAM: cobalt transport protein; KEGG: pca:Pcar_2395 hypothetical protein; cobalt transport protein	complement(4612514..4613197)	Shewanella sp. MR-4	4254428
YP_735986.1	CDS	Shewmr4_3866	NC_008321.1	4613187	4614554	R	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4712 ABC transporter, ATP-binding protein, putative; ABC transporter-like protein	complement(4613187..4614554)	Shewanella sp. MR-4	4254429
YP_735987.1	CDS	Shewmr4_3867	NC_008321.1	4614556	4616745	R	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: nha:Nham_3500 TonB-dependent receptor; TonB-dependent receptor, plug	complement(4614556..4616745)	Shewanella sp. MR-4	4254430
YP_735988.1	CDS	Shewmr4_3868	NC_008321.1	4617154	4618512	D	TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: son:SO4713 menaquinone-specific isochorismate synthase, putative; isochorismate synthases	4617154..4618512	Shewanella sp. MR-4	4254431
YP_735989.1	CDS	Shewmr4_3869	NC_008321.1	4618525	4619250	R	KEGG: son:SO4714 hypothetical protein; hypothetical protein	complement(4618525..4619250)	Shewanella sp. MR-4	4254432
YP_735990.1	CDS	Shewmr4_3870	NC_008321.1	4619498	4620151	D	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: son:SO4715 hypothetical protein; hypothetical protein	4619498..4620151	Shewanella sp. MR-4	4254433
YP_735991.1	CDS	Shewmr4_3871	NC_008321.1	4620251	4620718	D	KEGG: son:SO4716 acetyltransferase, GNAT family; acetyltransferase	4620251..4620718	Shewanella sp. MR-4	4254434
YP_735992.1	CDS	Shewmr4_3872	NC_008321.1	4620984	4623113	R	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4717 sensor histidine kinase; periplasmic sensor signal transduction histidine kinase	complement(4620984..4623113)	Shewanella sp. MR-4	4254435
YP_735993.1	CDS	Shewmr4_3873	NC_008321.1	4623114	4624544	R	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO4718 sigma-54 dependent response regulator; two component, sigma54 specific, Fis family transcriptional regulator	complement(4623114..4624544)	Shewanella sp. MR-4	4254436
YP_735994.1	CDS	Shewmr4_3874	NC_008321.1	4624781	4625605	D	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO4719 putative sulfate transport system substrate-binding protein; extracellular solute-binding protein	4624781..4625605	Shewanella sp. MR-4	4254437
YP_735995.1	CDS	Shewmr4_3875	NC_008321.1	4625602	4626309	D	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4720 ABC transporter, permease protein; binding-protein-dependent transport systems inner membrane component	4625602..4626309	Shewanella sp. MR-4	4254438
YP_735996.1	CDS	Shewmr4_3876	NC_008321.1	4626313	4627020	D	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4721 ABC transporter, ATP-binding protein; ABC transporter-like protein	4626313..4627020	Shewanella sp. MR-4	4254439
YP_735997.1	CDS	Shewmr4_3877	NC_008321.1	4627004	4627597	D	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: son:SO4722 molybdopterin-guanine dinucleotide biosynthesis protein; molybdenum cofactor guanylyltransferase	4627004..4627597	Shewanella sp. MR-4	4254440
YP_735998.1	CDS	Shewmr4_3878	NC_008321.1	4627628	4629427	D	TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin binding domain; molybdopterin-guanine dinucleotide biosynthesis MobB region; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: son:SO4723 molybdopterin biosynthesis MoeA protein, putative; putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA	4627628..4629427	Shewanella sp. MR-4	4254441
YP_735999.1	CDS	Shewmr4_3879	NC_008321.1	4629444	4630427	D	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A	4629444..4630427	Shewanella sp. MR-4	4254442
YP_736000.1	CDS	Shewmr4_3880	NC_008321.1	4630509	4630964	D	KEGG: son:SO4725 hypothetical protein; hypothetical protein	4630509..4630964	Shewanella sp. MR-4	4254443
YP_736001.1	CDS	Shewmr4_3881	NC_008321.1	4630989	4631804	D	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase	4630989..4631804	Shewanella sp. MR-4	4254444
YP_736002.1	CDS	Shewmr4_3882	NC_008321.1	4631866	4633590	R	PFAM: glycosyl transferase, family 39; KEGG: son:SO4690 hypothetical protein; glycosyl transferase family protein	complement(4631866..4633590)	Shewanella sp. MR-4	4254445
YP_736003.1	CDS	Shewmr4_3883	NC_008321.1	4633604	4634263	R	KEGG: son:SO4689 hypothetical protein; hypothetical protein	complement(4633604..4634263)	Shewanella sp. MR-4	4254446
YP_736004.1	CDS	Shewmr4_3884	NC_008321.1	4634265	4634996	R	PFAM: glycosyl transferase, family 2; KEGG: son:SO4688 glycosyl transferase, group 2 family protein; glycosyl transferase family protein	complement(4634265..4634996)	Shewanella sp. MR-4	4254447
YP_736005.1	CDS	Shewmr4_3885	NC_008321.1	4635164	4636393	D	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: son:SO4687 UDP-glucose 6-dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase	4635164..4636393	Shewanella sp. MR-4	4254448
YP_736006.1	CDS	Shewmr4_3886	NC_008321.1	4636418	4637425	D	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO4686 NAD dependent epimerase/dehydratase family protein; UDP-glucuronate 5'-epimerase	4636418..4637425	Shewanella sp. MR-4	4254449
YP_736007.1	CDS	Shewmr4_3887	NC_008321.1	4637484	4638956	R	KEGG: son:SO4685 hypothetical protein; hypothetical protein	complement(4637484..4638956)	Shewanella sp. MR-4	4254450
YP_736008.1	CDS	coaD	NC_008321.1	4639022	4639513	R	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase	complement(4639022..4639513)	Shewanella sp. MR-4	4254451
YP_736009.1	CDS	Shewmr4_3889	NC_008321.1	4639788	4640858	D	PFAM: glycosyl transferase, group 1; KEGG: son:SO4682 glycosyl transferase, group 1 family protein; glycosyl transferase, group 1	4639788..4640858	Shewanella sp. MR-4	4254452
YP_736010.1	CDS	Shewmr4_3890	NC_008321.1	4640869	4641270	D	TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; capsule biosynthesis phosphatase; KEGG: vch:VC0232 hypothetical protein; capsule biosynthesis phosphatase	4640869..4641270	Shewanella sp. MR-4	4254453
YP_736011.1	CDS	Shewmr4_3891	NC_008321.1	4641261	4642826	D	KEGG: vch:VC0231 hypothetical protein; hypothetical protein	4641261..4642826	Shewanella sp. MR-4	4254454
YP_736012.1	CDS	Shewmr4_3892	NC_008321.1	4642823	4643551	D	KEGG: vch:VC0230 hypothetical protein; hypothetical protein	4642823..4643551	Shewanella sp. MR-4	4254455
YP_736013.1	CDS	Shewmr4_3893	NC_008321.1	4643596	4644486	R	KEGG: vch:VC0228 hypothetical protein; hypothetical protein	complement(4643596..4644486)	Shewanella sp. MR-4	4254456
YP_736014.1	CDS	Shewmr4_3894	NC_008321.1	4644532	4645605	R	PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: son:SO4680 hypothetical protein; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase	complement(4644532..4645605)	Shewanella sp. MR-4	4254457
YP_736015.1	CDS	Shewmr4_3895	NC_008321.1	4645625	4646710	R	PFAM: glycosyl transferase, group 1; KEGG: son:SO4679 glycosyl transferase, group 1 family protein; glycosyl transferase, group 1	complement(4645625..4646710)	Shewanella sp. MR-4	4254458
YP_736016.1	CDS	Shewmr4_3896	NC_008321.1	4646763	4647785	R	PFAM: glycosyl transferase, family 9; KEGG: son:SO4678 heptosyl transferase, glycosyltransferase family 9 protein; glycosyl transferase family protein	complement(4646763..4647785)	Shewanella sp. MR-4	4254459
YP_736017.1	CDS	Shewmr4_3897	NC_008321.1	4647895	4648647	D	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase	4647895..4648647	Shewanella sp. MR-4	4254460
YP_736018.1	CDS	Shewmr4_3898	NC_008321.1	4648662	4649987	R	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: son:SO4676 3-deoxy-D-manno-octulosonic-acid (KDO) transferase; 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein	complement(4648662..4649987)	Shewanella sp. MR-4	4254461
YP_736019.1	CDS	Shewmr4_3899	NC_008321.1	4650182	4650829	D	PFAM: regulatory protein, TetR; KEGG: son:SO4675 transcriptional regulator, TetR family; TetR family transcriptional regulator	4650182..4650829	Shewanella sp. MR-4	4254462
YP_736020.1	CDS	Shewmr4_3900	NC_008321.1	4651100	4652293	D	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase	4651100..4652293	Shewanella sp. MR-4	4254463
YP_736021.1	CDS	tdh	NC_008321.1	4652305	4653330	D	converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase	4652305..4653330	Shewanella sp. MR-4	4254464
YP_736022.1	CDS	Shewmr4_3902	NC_008321.1	4653429	4653734	D	PFAM: Rhodanese domain protein; KEGG: son:SO4672 glpE protein; rhodanese domain-containing protein	4653429..4653734	Shewanella sp. MR-4	4254465
YP_736023.1	CDS	Shewmr4_3903	NC_008321.1	4653731	4654573	D	PFAM: Rhomboid family protein; KEGG: son:SO4671 glpG protein; rhomboid family protein	4653731..4654573	Shewanella sp. MR-4	4254466
YP_736024.1	CDS	Shewmr4_3904	NC_008321.1	4654650	4655306	R	PFAM: ThiJ/PfpI domain protein; KEGG: son:SO4670 enhancing lycopene biosynthesis protein; isoprenoid biosynthesis protein with amidotransferase-like domain	complement(4654650..4655306)	Shewanella sp. MR-4	4254467
YP_736025.1	CDS	Shewmr4_3905	NC_008321.1	4655692	4658460	D	KEGG: son:SO4669 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I	4655692..4658460	Shewanella sp. MR-4	4254468
YP_736026.1	CDS	engB	NC_008321.1	4659439	4660098	R	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC	complement(4659439..4660098)	Shewanella sp. MR-4	4254469
YP_736027.1	CDS	Shewmr4_3907	NC_008321.1	4660268	4660891	D	PFAM: cytochrome c, class I; KEGG: son:SO4666 cytochrome c; cytochrome c, class I	4660268..4660891	Shewanella sp. MR-4	4254470
YP_736028.1	CDS	Shewmr4_3908	NC_008321.1	4661715	4662353	D	KEGG: son:SO4727 hypothetical protein; hypothetical protein	4661715..4662353	Shewanella sp. MR-4	4254471
YP_736029.1	CDS	Shewmr4_3909	NC_008321.1	4662436	4662990	D	PFAM: protein of unknown function DUF414; KEGG: son:SO4728 hypothetical protein; hypothetical protein	4662436..4662990	Shewanella sp. MR-4	4254472
YP_736030.1	CDS	Shewmr4_3910	NC_008321.1	4663059	4663526	D	KEGG: son:SO4729 hypothetical protein; hypothetical protein	4663059..4663526	Shewanella sp. MR-4	4254473
YP_736031.1	CDS	Shewmr4_3911	NC_008321.1	4663820	4665160	D	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase	4663820..4665160	Shewanella sp. MR-4	4254474
YP_736032.1	CDS	Shewmr4_3912	NC_008321.1	4665232	4666227	R	catalyzes the formation of inosine from adenosine; adenosine deaminase	complement(4665232..4666227)	Shewanella sp. MR-4	4254475
YP_736033.1	CDS	Shewmr4_3913	NC_008321.1	4666439	4668244	D	PFAM: protein of unknown function DUF885; KEGG: son:SO4732 hypothetical protein; hypothetical protein	4666439..4668244	Shewanella sp. MR-4	4254476
YP_736034.1	CDS	Shewmr4_3914	NC_008321.1	4668347	4669360	D	PFAM: alpha/beta hydrolase fold; KEGG: son:SO4733 lysophospholipase L2; alpha/beta hydrolase fold domain-containing protein	4668347..4669360	Shewanella sp. MR-4	4254477
YP_736035.1	CDS	Shewmr4_3915	NC_008321.1	4669317	4671767	R	KEGG: son:SO4734 sensory box protein; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; diguanylate phosphodiesterase	complement(4669317..4671767)	Shewanella sp. MR-4	4254478
YP_736036.1	CDS	Shewmr4_3916	NC_008321.1	4677703	4679130	R	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4737 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein	complement(4677703..4679130)	Shewanella sp. MR-4	4254479
YP_736037.1	CDS	Shewmr4_3917	NC_008321.1	4679222	4679572	D	KEGG: son:SO4738 hypothetical protein; hypothetical protein	4679222..4679572	Shewanella sp. MR-4	4254480
YP_736038.1	CDS	Shewmr4_3918	NC_008321.1	4679689	4680591	D	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase	4679689..4680591	Shewanella sp. MR-4	4254481
YP_736039.1	CDS	Shewmr4_3919	NC_008321.1	4680756	4680959	D	KEGG: son:SO4740 hypothetical protein; hypothetical protein	4680756..4680959	Shewanella sp. MR-4	4254482
YP_736040.1	CDS	Shewmr4_3920	NC_008321.1	4681040	4682869	R	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase	complement(4681040..4682869)	Shewanella sp. MR-4	4254483
YP_736041.1	CDS	Shewmr4_3921	NC_008321.1	4682945	4683727	R	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: son:SO4742 transcriptional regulator, DeoR family; DeoR family transcriptional regulator	complement(4682945..4683727)	Shewanella sp. MR-4	4254484
YP_736042.1	CDS	Shewmr4_3922	NC_008321.1	4683917	4686046	R	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4743 TonB-dependent receptor, putative; TonB-dependent siderophore receptor	complement(4683917..4686046)	Shewanella sp. MR-4	4254485
YP_736043.1	CDS	Shewmr4_3923	NC_008321.1	4686308	4687672	R	KEGG: son:SO4745 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase	complement(4686308..4687672)	Shewanella sp. MR-4	4254486
YP_736044.1	CDS	atpC	NC_008321.1	4687843	4688271	R	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon	complement(4687843..4688271)	Shewanella sp. MR-4	4254487
YP_736045.1	CDS	Shewmr4_3925	NC_008321.1	4688308	4689699	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta	complement(4688308..4689699)	Shewanella sp. MR-4	4254488
YP_736046.1	CDS	Shewmr4_3926	NC_008321.1	4689735	4690595	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma	complement(4689735..4690595)	Shewanella sp. MR-4	4254489
YP_736047.1	CDS	Shewmr4_3927	NC_008321.1	4690646	4692187	R	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha	complement(4690646..4692187)	Shewanella sp. MR-4	4254490
YP_736048.1	CDS	Shewmr4_3928	NC_008321.1	4692202	4692735	R	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta	complement(4692202..4692735)	Shewanella sp. MR-4	4254491
YP_736049.1	CDS	Shewmr4_3929	NC_008321.1	4692752	4693222	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B	complement(4692752..4693222)	Shewanella sp. MR-4	4254492
YP_736050.1	CDS	Shewmr4_3930	NC_008321.1	4693261	4693512	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C	complement(4693261..4693512)	Shewanella sp. MR-4	4254493
YP_736051.1	CDS	Shewmr4_3931	NC_008321.1	4693583	4694377	R	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A	complement(4693583..4694377)	Shewanella sp. MR-4	4254494
YP_736052.1	CDS	Shewmr4_3932	NC_008321.1	4694390	4694773	R	PFAM: ATP synthase I chain; KEGG: son:SO4754 ATP synthase protein I; ATP synthase I chain	complement(4694390..4694773)	Shewanella sp. MR-4	4254495
YP_736053.1	CDS	Shewmr4_3933	NC_008321.1	4694999	4695877	R	TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: son:SO4755 ParB family protein; chromosome segregation DNA-binding protein	complement(4694999..4695877)	Shewanella sp. MR-4	4254496
YP_736054.1	CDS	Shewmr4_3934	NC_008321.1	4695887	4696675	R	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO4756 ParA family protein; chromosome segregation ATPase	complement(4695887..4696675)	Shewanella sp. MR-4	4254497
YP_736055.1	CDS	gidB	NC_008321.1	4696750	4697370	R	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB	complement(4696750..4697370)	Shewanella sp. MR-4	4254498
YP_736056.1	CDS	Shewmr4_3936	NC_008321.1	4697488	4699377	R	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA	complement(4697488..4699377)	Shewanella sp. MR-4	4254499
YP_736057.1	CDS	Shewmr4_3937	NC_008321.1	4699818	4700258	R	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin	complement(4699818..4700258)	Shewanella sp. MR-4	4254500
YP_736058.1	CDS	Shewmr4_3938	NC_008321.1	4700437	4701984	D	PFAM: TGF-beta receptor, type I/II extracellular region; KEGG: son:SO0002 proton/peptide symporter family protein; TGF-beta receptor, type I/II extracellular region	4700437..4701984	Shewanella sp. MR-4	4254501
YP_736059.1	CDS	trmE	NC_008321.1	4702090	4703451	R	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE	complement(4702090..4703451)	Shewanella sp. MR-4	4254502
YP_736060.1	CDS	Shewmr4_3940	NC_008321.1	4703556	4705181	R	PFAM: 60 kDa inner membrane insertion protein; KEGG: son:SO0004 inner membrane protein, 60 kDa; protein translocase subunit yidC	complement(4703556..4705181)	Shewanella sp. MR-4	4254503
YP_736061.1	CDS	Shewmr4_3941	NC_008321.1	4705185	4705439	R	PFAM: protein of unknown function DUF37; KEGG: son:SO0005 conserved hypothetical protein TIGR00278; hypothetical protein	complement(4705185..4705439)	Shewanella sp. MR-4	4254504
YP_736062.1	CDS	rnpA	NC_008321.1	4705406	4705762	R	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P	complement(4705406..4705762)	Shewanella sp. MR-4	4254505
YP_736063.1	CDS	rpmH	NC_008321.1	4705783	4705920	R	in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34	complement(4705783..4705920)	Shewanella sp. MR-4	4254506
Shewmr4_R0004	tRNA	Shewmr4_R0004	NC_008321.1	47808	47884	D	tRNA-Asp	47808..47884	Shewanella sp. MR-4	4254510
Shewmr4_R0005	tRNA	Shewmr4_R0005	NC_008321.1	121959	122049	R	tRNA-Sec	complement(121959..122049)	Shewanella sp. MR-4	4254511
Shewmr4_R0008	tRNA	Shewmr4_R0008	NC_008321.1	203641	203717	D	tRNA-Ile	203641..203717	Shewanella sp. MR-4	4254514
Shewmr4_R0009	tRNA	Shewmr4_R0009	NC_008321.1	203763	203838	D	tRNA-Ala	203763..203838	Shewanella sp. MR-4	4254515
Shewmr4_R0012	tRNA	Shewmr4_R0012	NC_008321.1	210615	210690	D	tRNA-Thr	210615..210690	Shewanella sp. MR-4	4254518
Shewmr4_R0013	tRNA	Shewmr4_R0013	NC_008321.1	210698	210782	D	tRNA-Tyr	210698..210782	Shewanella sp. MR-4	4254519
Shewmr4_R0014	tRNA	Shewmr4_R0014	NC_008321.1	210818	210891	D	tRNA-Gly	210818..210891	Shewanella sp. MR-4	4254520
Shewmr4_R0015	tRNA	Shewmr4_R0015	NC_008321.1	210901	210976	D	tRNA-Thr	210901..210976	Shewanella sp. MR-4	4254521
Shewmr4_R0019	tRNA	Shewmr4_R0019	NC_008321.1	258571	258647	D	tRNA-Asp	258571..258647	Shewanella sp. MR-4	4254525
Shewmr4_R0020	tRNA	Shewmr4_R0020	NC_008321.1	405888	405964	D	tRNA-Arg	405888..405964	Shewanella sp. MR-4	4254526
Shewmr4_R0021	tRNA	Shewmr4_R0021	NC_008321.1	406018	406093	D	tRNA-His	406018..406093	Shewanella sp. MR-4	4254527
Shewmr4_R0022	tRNA	Shewmr4_R0022	NC_008321.1	406195	406271	D	tRNA-Pro	406195..406271	Shewanella sp. MR-4	4254528
Shewmr4_R0023	tRNA	Shewmr4_R0023	NC_008321.1	406325	406401	D	tRNA-Pro	406325..406401	Shewanella sp. MR-4	4254529
Shewmr4_R0024	tRNA	Shewmr4_R0024	NC_008321.1	683545	683620	D	tRNA-Gly	683545..683620	Shewanella sp. MR-4	4254530
Shewmr4_R0025	tRNA	Shewmr4_R0025	NC_008321.1	683653	683728	D	tRNA-Gly	683653..683728	Shewanella sp. MR-4	4254531
Shewmr4_R0026	tRNA	Shewmr4_R0026	NC_008321.1	683761	683836	D	tRNA-Gly	683761..683836	Shewanella sp. MR-4	4254532
Shewmr4_R0027	tRNA	Shewmr4_R0027	NC_008321.1	683881	683956	D	tRNA-Gly	683881..683956	Shewanella sp. MR-4	4254533
Shewmr4_R0031	tRNA	Shewmr4_R0031	NC_008321.1	1145358	1145434	D	tRNA-Trp	1145358..1145434	Shewanella sp. MR-4	4254537
Shewmr4_R0032	tRNA	Shewmr4_R0032	NC_008321.1	1176598	1176674	D	tRNA-Met	1176598..1176674	Shewanella sp. MR-4	4254538
Shewmr4_R0033	tRNA	Shewmr4_R0033	NC_008321.1	1176729	1176813	D	tRNA-Leu	1176729..1176813	Shewanella sp. MR-4	4254539
Shewmr4_R0034	tRNA	Shewmr4_R0034	NC_008321.1	1176861	1176935	D	tRNA-Gln	1176861..1176935	Shewanella sp. MR-4	4254540
Shewmr4_R0035	tRNA	Shewmr4_R0035	NC_008321.1	1176958	1177032	D	tRNA-Gln	1176958..1177032	Shewanella sp. MR-4	4254541
Shewmr4_R0036	tRNA	Shewmr4_R0036	NC_008321.1	1177034	1177110	D	tRNA-Met	1177034..1177110	Shewanella sp. MR-4	4254542
Shewmr4_R0037	tRNA	Shewmr4_R0037	NC_008321.1	1177194	1177278	D	tRNA-Leu	1177194..1177278	Shewanella sp. MR-4	4254543
Shewmr4_R0038	tRNA	Shewmr4_R0038	NC_008321.1	1177299	1177373	D	tRNA-Gln	1177299..1177373	Shewanella sp. MR-4	4254544
Shewmr4_R0039	tRNA	Shewmr4_R0039	NC_008321.1	1192179	1192265	D	tRNA-Leu	1192179..1192265	Shewanella sp. MR-4	4254545
Shewmr4_R0040	tRNA	Shewmr4_R0040	NC_008321.1	1192349	1192425	D	tRNA-Met	1192349..1192425	Shewanella sp. MR-4	4254546
Shewmr4_R0042	tRNA	Shewmr4_R0042	NC_008321.1	1327447	1327538	D	tRNA-Ser	1327447..1327538	Shewanella sp. MR-4	4254548
Shewmr4_R0043	tRNA	Shewmr4_R0043	NC_008321.1	1327559	1327635	D	tRNA-Arg	1327559..1327635	Shewanella sp. MR-4	4254549
Shewmr4_R0044	tRNA	Shewmr4_R0044	NC_008321.1	1327666	1327742	D	tRNA-Arg	1327666..1327742	Shewanella sp. MR-4	4254550
Shewmr4_R0045	tRNA	Shewmr4_R0045	NC_008321.1	1327825	1327901	D	tRNA-Arg	1327825..1327901	Shewanella sp. MR-4	4254551
Shewmr4_R0046	tRNA	Shewmr4_R0046	NC_008321.1	1327945	1328021	D	tRNA-Arg	1327945..1328021	Shewanella sp. MR-4	4254552
Shewmr4_R0047	tRNA	Shewmr4_R0047	NC_008321.1	1328066	1328142	D	tRNA-Arg	1328066..1328142	Shewanella sp. MR-4	4254553
Shewmr4_R0048	tRNA	Shewmr4_R0048	NC_008321.1	1328179	1328270	D	tRNA-Ser	1328179..1328270	Shewanella sp. MR-4	4254554
Shewmr4_R0049	tRNA	Shewmr4_R0049	NC_008321.1	1328365	1328441	D	tRNA-Arg	1328365..1328441	Shewanella sp. MR-4	4254555
Shewmr4_R0050	tRNA	Shewmr4_R0050	NC_008321.1	1380672	1380747	R	tRNA-Thr	complement(1380672..1380747)	Shewanella sp. MR-4	4254556
Shewmr4_R0051	tRNA	Shewmr4_R0051	NC_008321.1	1380754	1380829	R	tRNA-Phe	complement(1380754..1380829)	Shewanella sp. MR-4	4254557
Shewmr4_R0052	tRNA	Shewmr4_R0052	NC_008321.1	1381287	1381362	R	tRNA-Thr	complement(1381287..1381362)	Shewanella sp. MR-4	4254558
Shewmr4_R0053	tRNA	Shewmr4_R0053	NC_008321.1	1381369	1381444	R	tRNA-Phe	complement(1381369..1381444)	Shewanella sp. MR-4	4254559
Shewmr4_R0054	tRNA	Shewmr4_R0054	NC_008321.1	1460028	1460103	R	tRNA-Arg	complement(1460028..1460103)	Shewanella sp. MR-4	4254560
Shewmr4_R0056	tRNA	Shewmr4_R0056	NC_008321.1	1587682	1587757	R	tRNA-Val	complement(1587682..1587757)	Shewanella sp. MR-4	4254561
Shewmr4_R0057	tRNA	Shewmr4_R0057	NC_008321.1	1587783	1587858	R	tRNA-Val	complement(1587783..1587858)	Shewanella sp. MR-4	4254562
Shewmr4_R0058	tRNA	Shewmr4_R0058	NC_008321.1	1587900	1587975	R	tRNA-Val	complement(1587900..1587975)	Shewanella sp. MR-4	4254563
Shewmr4_R0059	tRNA	Shewmr4_R0059	NC_008321.1	1588017	1588092	R	tRNA-Val	complement(1588017..1588092)	Shewanella sp. MR-4	4254564
Shewmr4_R0060	tRNA	Shewmr4_R0060	NC_008321.1	1588125	1588200	R	tRNA-Val	complement(1588125..1588200)	Shewanella sp. MR-4	4254565
Shewmr4_R0061	tRNA	Shewmr4_R0061	NC_008321.1	1588249	1588324	R	tRNA-Val	complement(1588249..1588324)	Shewanella sp. MR-4	4254566
Shewmr4_R0062	tRNA	Shewmr4_R0062	NC_008321.1	1590422	1590497	D	tRNA-Ala	1590422..1590497	Shewanella sp. MR-4	4254567
Shewmr4_R0063	tRNA	Shewmr4_R0063	NC_008321.1	1590565	1590640	D	tRNA-Glu	1590565..1590640	Shewanella sp. MR-4	4254568
Shewmr4_R0064	tRNA	Shewmr4_R0064	NC_008321.1	1590748	1590823	D	tRNA-Ala	1590748..1590823	Shewanella sp. MR-4	4254569
Shewmr4_R0065	tRNA	Shewmr4_R0065	NC_008321.1	1590888	1590963	D	tRNA-Glu	1590888..1590963	Shewanella sp. MR-4	4254570
Shewmr4_R0066	tRNA	Shewmr4_R0066	NC_008321.1	1591144	1591219	D	tRNA-Glu	1591144..1591219	Shewanella sp. MR-4	4254571
Shewmr4_R0067	tRNA	Shewmr4_R0067	NC_008321.1	1591317	1591392	D	tRNA-Glu	1591317..1591392	Shewanella sp. MR-4	4254572
Shewmr4_R0068	tRNA	Shewmr4_R0068	NC_008321.1	1591573	1591648	D	tRNA-Glu	1591573..1591648	Shewanella sp. MR-4	4254573
Shewmr4_R0069	tRNA	Shewmr4_R0069	NC_008321.1	1591829	1591904	D	tRNA-Glu	1591829..1591904	Shewanella sp. MR-4	4254574
Shewmr4_R0070	tRNA	Shewmr4_R0070	NC_008321.1	1592085	1592160	D	tRNA-Glu	1592085..1592160	Shewanella sp. MR-4	4254575
Shewmr4_R0072	tRNA	Shewmr4_R0072	NC_008321.1	1792693	1792769	D	tRNA-Ile	1792693..1792769	Shewanella sp. MR-4	4254577
Shewmr4_R0073	tRNA	Shewmr4_R0073	NC_008321.1	1792908	1792983	D	tRNA-Ala	1792908..1792983	Shewanella sp. MR-4	4254578
Shewmr4_R0076	tRNA	Shewmr4_R0076	NC_008321.1	1815933	1816009	R	tRNA-Met	complement(1815933..1816009)	Shewanella sp. MR-4	4254581
Shewmr4_R0077	tRNA	Shewmr4_R0077	NC_008321.1	1816057	1816133	R	tRNA-Met	complement(1816057..1816133)	Shewanella sp. MR-4	4254582
Shewmr4_R0078	tRNA	Shewmr4_R0078	NC_008321.1	1816223	1816299	R	tRNA-Met	complement(1816223..1816299)	Shewanella sp. MR-4	4254583
Shewmr4_R0079	tRNA	Shewmr4_R0079	NC_008321.1	1816338	1816414	R	tRNA-Met	complement(1816338..1816414)	Shewanella sp. MR-4	4254584
Shewmr4_R0080	tRNA	Shewmr4_R0080	NC_008321.1	1825840	1825930	D	tRNA-Ser	1825840..1825930	Shewanella sp. MR-4	4254585
Shewmr4_R0081	tRNA	Shewmr4_R0081	NC_008321.1	1826727	1826817	D	tRNA-Ser	1826727..1826817	Shewanella sp. MR-4	4254586
Shewmr4_R0082	tRNA	Shewmr4_R0082	NC_008321.1	1830560	1830635	D	tRNA-Gly	1830560..1830635	Shewanella sp. MR-4	4254587
Shewmr4_R0083	tRNA	Shewmr4_R0083	NC_008321.1	1830657	1830730	D	tRNA-Cys	1830657..1830730	Shewanella sp. MR-4	4254588
Shewmr4_R0084	tRNA	Shewmr4_R0084	NC_008321.1	1830779	1830865	D	tRNA-Leu	1830779..1830865	Shewanella sp. MR-4	4254589
Shewmr4_R0085	tRNA	Shewmr4_R0085	NC_008321.1	1830996	1831082	D	tRNA-Leu	1830996..1831082	Shewanella sp. MR-4	4254590
Shewmr4_R0086	tRNA	Shewmr4_R0086	NC_008321.1	1999543	1999630	D	tRNA-Ser	1999543..1999630	Shewanella sp. MR-4	4254591
Shewmr4_R0089	tRNA	Shewmr4_R0089	NC_008321.1	2328222	2328298	R	tRNA-Val	complement(2328222..2328298)	Shewanella sp. MR-4	4254593
Shewmr4_R0090	tRNA	Shewmr4_R0090	NC_008321.1	2328337	2328413	R	tRNA-Val	complement(2328337..2328413)	Shewanella sp. MR-4	4254594
Shewmr4_R0091	tRNA	Shewmr4_R0091	NC_008321.1	2350019	2350109	D	tRNA-Ser	2350019..2350109	Shewanella sp. MR-4	4254595
Shewmr4_R0092	tRNA	Shewmr4_R0092	NC_008321.1	2406007	2406093	R	tRNA-Leu	complement(2406007..2406093)	Shewanella sp. MR-4	4254596
Shewmr4_R0093	tRNA	Shewmr4_R0093	NC_008321.1	2406143	2406216	R	tRNA-Cys	complement(2406143..2406216)	Shewanella sp. MR-4	4254597
Shewmr4_R0094	tRNA	Shewmr4_R0094	NC_008321.1	2406240	2406315	R	tRNA-Gly	complement(2406240..2406315)	Shewanella sp. MR-4	4254598
Shewmr4_R0095	tRNA	Shewmr4_R0095	NC_008321.1	2448931	2449015	D	tRNA-Tyr	2448931..2449015	Shewanella sp. MR-4	4254599
Shewmr4_R0096	tRNA	Shewmr4_R0096	NC_008321.1	2449055	2449139	D	tRNA-Tyr	2449055..2449139	Shewanella sp. MR-4	4254600
Shewmr4_R0097	tRNA	Shewmr4_R0097	NC_008321.1	2449256	2449340	D	tRNA-Tyr	2449256..2449340	Shewanella sp. MR-4	4254601
Shewmr4_R0098	tRNA	Shewmr4_R0098	NC_008321.1	2455379	2455454	D	tRNA-Asn	2455379..2455454	Shewanella sp. MR-4	4254602
Shewmr4_R0099	tRNA	Shewmr4_R0099	NC_008321.1	2455501	2455576	D	tRNA-Asn	2455501..2455576	Shewanella sp. MR-4	4254603
Shewmr4_R0100	tRNA	Shewmr4_R0100	NC_008321.1	2455607	2455682	D	tRNA-Asn	2455607..2455682	Shewanella sp. MR-4	4254604
Shewmr4_R0101	tRNA	Shewmr4_R0101	NC_008321.1	2455728	2455803	D	tRNA-Asn	2455728..2455803	Shewanella sp. MR-4	4254605
Shewmr4_R0102	tRNA	Shewmr4_R0102	NC_008321.1	2455850	2455925	D	tRNA-Asn	2455850..2455925	Shewanella sp. MR-4	4254606
Shewmr4_R0103	tRNA	Shewmr4_R0103	NC_008321.1	2583734	2583810	R	tRNA-Asp	complement(2583734..2583810)	Shewanella sp. MR-4	4254607
Shewmr4_R0104	tRNA	Shewmr4_R0104	NC_008321.1	2583868	2583944	R	tRNA-Asp	complement(2583868..2583944)	Shewanella sp. MR-4	4254608
Shewmr4_R0105	tRNA	Shewmr4_R0105	NC_008321.1	2681894	2681970	R	tRNA-Pro	complement(2681894..2681970)	Shewanella sp. MR-4	4254609
Shewmr4_R0107	tRNA	Shewmr4_R0107	NC_008321.1	2822195	2822270	R	tRNA-Lys	complement(2822195..2822270)	Shewanella sp. MR-4	4254611
Shewmr4_R0108	tRNA	Shewmr4_R0108	NC_008321.1	2822432	2822507	R	tRNA-Lys	complement(2822432..2822507)	Shewanella sp. MR-4	4254612
Shewmr4_R0109	tRNA	Shewmr4_R0109	NC_008321.1	2822543	2822618	R	tRNA-Lys	complement(2822543..2822618)	Shewanella sp. MR-4	4254613
Shewmr4_R0110	tRNA	Shewmr4_R0110	NC_008321.1	2822782	2822857	R	tRNA-Lys	complement(2822782..2822857)	Shewanella sp. MR-4	4254614
Shewmr4_R0111	tRNA	Shewmr4_R0111	NC_008321.1	2822895	2822970	R	tRNA-Lys	complement(2822895..2822970)	Shewanella sp. MR-4	4254615
Shewmr4_R0112	tRNA	Shewmr4_R0112	NC_008321.1	2823006	2823081	R	tRNA-Lys	complement(2823006..2823081)	Shewanella sp. MR-4	4254616
Shewmr4_R0113	tRNA	Shewmr4_R0113	NC_008321.1	2823136	2823211	R	tRNA-Lys	complement(2823136..2823211)	Shewanella sp. MR-4	4254617
Shewmr4_R0115	tRNA	Shewmr4_R0115	NC_008321.1	2967638	2967713	R	tRNA-His	complement(2967638..2967713)	Shewanella sp. MR-4	4254619
Shewmr4_R0116	tRNA	Shewmr4_R0116	NC_008321.1	2967723	2967799	R	tRNA-Arg	complement(2967723..2967799)	Shewanella sp. MR-4	4254620
Shewmr4_R0117	tRNA	Shewmr4_R0117	NC_008321.1	2967915	2967991	R	tRNA-Pro	complement(2967915..2967991)	Shewanella sp. MR-4	4254621
Shewmr4_R0120	tRNA	Shewmr4_R0120	NC_008321.1	3471665	3471741	D	tRNA-Met	3471665..3471741	Shewanella sp. MR-4	4254624
Shewmr4_R0124	tRNA	Shewmr4_R0124	NC_008321.1	3582813	3582888	D	tRNA-Phe	3582813..3582888	Shewanella sp. MR-4	4254628
Shewmr4_R0125	tRNA	Shewmr4_R0125	NC_008321.1	3582944	3583030	D	tRNA-Leu	3582944..3583030	Shewanella sp. MR-4	4254629
Shewmr4_R0126	tRNA	Shewmr4_R0126	NC_008321.1	3583074	3583160	D	tRNA-Leu	3583074..3583160	Shewanella sp. MR-4	4254630
Shewmr4_R0128	tRNA	Shewmr4_R0128	NC_008321.1	3850188	3850274	R	tRNA-Leu	complement(3850188..3850274)	Shewanella sp. MR-4	4254632
Shewmr4_R0133	tRNA	Shewmr4_R0133	NC_008321.1	4256466	4256541	R	tRNA-Thr	complement(4256466..4256541)	Shewanella sp. MR-4	4254637
Shewmr4_R0001	rRNA	Shewmr4_R0001	NC_008321.1	42695	44229	D	16S ribosomal RNA	42695..44229	Shewanella sp. MR-4	4254507
Shewmr4_R0002	rRNA	Shewmr4_R0002	NC_008321.1	44542	47434	D	23S ribosomal RNA	44542..47434	Shewanella sp. MR-4	4254508
Shewmr4_R0003	rRNA	Shewmr4_R0003	NC_008321.1	47656	47771	D	5S ribosomal RNA	47656..47771	Shewanella sp. MR-4	4254509
Shewmr4_R0007	rRNA	Shewmr4_R0007	NC_008321.1	201986	203520	D	16S ribosomal RNA	201986..203520	Shewanella sp. MR-4	4254513
Shewmr4_R0010	rRNA	Shewmr4_R0010	NC_008321.1	204112	207004	D	23S ribosomal RNA	204112..207004	Shewanella sp. MR-4	4254516
Shewmr4_R0011	rRNA	Shewmr4_R0011	NC_008321.1	207136	207251	D	5S ribosomal RNA	207136..207251	Shewanella sp. MR-4	4254517
Shewmr4_R0016	rRNA	Shewmr4_R0016	NC_008321.1	253459	254993	D	16S ribosomal RNA	253459..254993	Shewanella sp. MR-4	4254522
Shewmr4_R0017	rRNA	Shewmr4_R0017	NC_008321.1	255305	258197	D	23S ribosomal RNA	255305..258197	Shewanella sp. MR-4	4254523
Shewmr4_R0018	rRNA	Shewmr4_R0018	NC_008321.1	258419	258534	D	5S ribosomal RNA	258419..258534	Shewanella sp. MR-4	4254524
Shewmr4_R0071	rRNA	Shewmr4_R0071	NC_008321.1	1791058	1792592	D	16S ribosomal RNA	1791058..1792592	Shewanella sp. MR-4	4254576
Shewmr4_R0074	rRNA	Shewmr4_R0074	NC_008321.1	1793259	1796151	D	23S ribosomal RNA	1793259..1796151	Shewanella sp. MR-4	4254579
Shewmr4_R0075	rRNA	Shewmr4_R0075	NC_008321.1	1796373	1796488	D	5S ribosomal RNA	1796373..1796488	Shewanella sp. MR-4	4254580
Shewmr4_R0121	rRNA	Shewmr4_R0121	NC_008321.1	3569887	3570002	R	5S ribosomal RNA	complement(3569887..3570002)	Shewanella sp. MR-4	4254625
Shewmr4_R0122	rRNA	Shewmr4_R0122	NC_008321.1	3570224	3573116	R	23S ribosomal RNA	complement(3570224..3573116)	Shewanella sp. MR-4	4254626
Shewmr4_R0123	rRNA	Shewmr4_R0123	NC_008321.1	3573475	3575009	R	16S ribosomal RNA	complement(3573475..3575009)	Shewanella sp. MR-4	4254627
Shewmr4_R0130	rRNA	Shewmr4_R0130	NC_008321.1	4250262	4250377	R	5S ribosomal RNA	complement(4250262..4250377)	Shewanella sp. MR-4	4254634
Shewmr4_R0131	rRNA	Shewmr4_R0131	NC_008321.1	4250508	4253400	R	23S ribosomal RNA	complement(4250508..4253400)	Shewanella sp. MR-4	4254635
Shewmr4_R0132	rRNA	Shewmr4_R0132	NC_008321.1	4253712	4255246	R	16S ribosomal RNA	complement(4253712..4255246)	Shewanella sp. MR-4	4254636
Shewmr4_R0134	rRNA	Shewmr4_R0134	NC_008321.1	4256575	4256690	R	5S ribosomal RNA	complement(4256575..4256690)	Shewanella sp. MR-4	4254638
Shewmr4_R0135	rRNA	Shewmr4_R0135	NC_008321.1	4256912	4259804	R	23S ribosomal RNA	complement(4256912..4259804)	Shewanella sp. MR-4	4254639
Shewmr4_R0136	rRNA	Shewmr4_R0136	NC_008321.1	4260116	4261650	R	16S ribosomal RNA	complement(4260116..4261650)	Shewanella sp. MR-4	4254640
Shewmr4_R0138	rRNA	Shewmr4_R0138	NC_008321.1	4432961	4433076	R	5S ribosomal RNA	complement(4432961..4433076)	Shewanella sp. MR-4	4254642
Shewmr4_R0139	rRNA	Shewmr4_R0139	NC_008321.1	4433298	4436190	R	23S ribosomal RNA	complement(4433298..4436190)	Shewanella sp. MR-4	4254643
Shewmr4_R0140	rRNA	Shewmr4_R0140	NC_008321.1	4436502	4438036	R	16S ribosomal RNA	complement(4436502..4438036)	Shewanella sp. MR-4	4254644
Shewmr4_R0141	rRNA	Shewmr4_R0141	NC_008321.1	4672013	4672128	R	5S ribosomal RNA	complement(4672013..4672128)	Shewanella sp. MR-4	4254645
Shewmr4_R0142	rRNA	Shewmr4_R0142	NC_008321.1	4672350	4675242	R	23S ribosomal RNA	complement(4672350..4675242)	Shewanella sp. MR-4	4254646
Shewmr4_R0143	rRNA	Shewmr4_R0143	NC_008321.1	4675601	4677135	R	16S ribosomal RNA	complement(4675601..4677135)	Shewanella sp. MR-4	4254647