-- dump date   	20140620_064056
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_732132.1	PFAM: initiator RepB protein; KEGG: gka:GKP02 replication initiator protein
YP_732133.1	KEGG: cps:CPS_0716 hypothetical protein
YP_732134.1	KEGG: rme:Rmet_6065 hypothetical protein
YP_732136.1	TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: son:SOA0023 proteic killer suppressor protein
YP_732137.1	PFAM: plasmid maintenance system killer; KEGG: son:SOA0022 proteic killer active protein
YP_732138.1	KEGG: son:SOA0173 hypothetical protein
YP_732139.1	KEGG: noc:Noc_0627 putative integrase
YP_736064.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_736065.1	KEGG: son:SO0009 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain
YP_736066.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_736067.1	KEGG: son:SO0011 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II
YP_736068.1	PFAM: Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO0012 glutathione S-transferase family protein
YP_736069.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vvu:VV20874 transcriptional regulator
YP_736070.1	KEGG: son:SO0013 hypothetical protein
YP_736071.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_736072.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_736073.1	KEGG: son:SO0016 DNA-3-methyladenine glycosidase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase
YP_736074.1	PFAM: amidohydrolase; WD40 domain protein beta Propeller; KEGG: son:SO0017 hypothetical amidohydrolase
YP_736075.1	KEGG: son:SO0018 hypothetical protein
YP_736076.1	TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs
YP_736077.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cvi:CV0239 hypothetical protein
YP_736078.1	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_736079.1	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_736080.1	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters
YP_736081.1	PFAM: protein of unknown function UPF0029; KEGG: son:SO0023 conserved hypothetical protein TIGR00257
YP_736082.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: son:SO0024 potassium uptake protein TrkH
YP_736083.1	KEGG: son:SO0025 protoporphyrinogen oxidase
YP_736084.1	PFAM: regulatory protein, ArsR; KEGG: son:SO0026 transcriptional regulator, ArsR family
YP_736085.1	KEGG: son:SO0027 protoporphyrinogen oxidase
YP_736086.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: son:SO0028 potassium uptake protein TrkH
YP_736087.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_736088.1	TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: son:SO0030 Sun protein
YP_736089.1	TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: son:SO0031 methionyl-tRNA formyltransferase
YP_736090.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_736091.1	PFAM: Peptidoglycan-binding LysM; KEGG: son:SO0033 LysM domain protein
YP_736092.1	TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: son:SO0034 DNA processing protein DprA, putative
YP_736093.1	PFAM: protein of unknown function DUF494; KEGG: son:SO0035 Smg protein
YP_736094.1	PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: son:SO0036 topoisomerase DNA-binding C4 zinc finger domain protein
YP_736095.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain protein; KEGG: son:SO0037 Sua5/YciO/YrdC/YwlC family protein
YP_736096.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_736097.1	PFAM: globin; KEGG: son:SO0039 hypothetical globin
YP_736098.1	AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate
YP_736099.1	PFAM: protein of unknown function DUF1488; KEGG: son:SO0041 hypothetical protein
YP_736100.1	KEGG: son:SO0042 carbonic anhydrase, family 3
YP_736101.1	PFAM: protein of unknown function UPF0153; KEGG: son:SO0044 hypothetical protein
YP_736102.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: son:SO0045 Rrf2 family protein
YP_736103.1	PFAM: protein of unknown function DUF610, YibQ; KEGG: son:SO0046 hypothetical protein
YP_736104.1	KEGG: son:SO0047 carboxyl-terminal protease, putative; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41
YP_736105.1	PFAM: peptidase M23B; KEGG: son:SO0048 peptidase, M23/M37 family
YP_736106.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_736107.1	PFAM: Rhodanese domain protein; KEGG: son:SO0050 rhodanese domain protein
YP_736108.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_736109.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_736110.1	PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0054 conserved hypothetical protein TIGR00275
YP_736111.1	SMART: Tetratricopeptide domain protein; KEGG: son:SO0055 hypothetical protein
YP_736112.1	TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: son:SO0057 potassium uptake protein, Trk family
YP_736113.1	PFAM: TrkA-N domain protein; KEGG: son:SO0058 potassium uptake protein, putative
YP_736114.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO0059 transcriptional regulatory protein KdpE
YP_736115.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO0060 sensor histidine kinase
YP_736116.1	PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: csa:Csal_1778 pirin-like protein
YP_736117.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: cvi:CV1771 probable sensor kinase protein
YP_736118.1	PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cvi:CV1770 probable two-component transcriptional regulator
YP_736119.1	PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV1769 probable resistance protein
YP_736120.1	KEGG: ppr:PBPRA1645 hypothetical protein
YP_736121.1	PFAM: protein of unknown function DUF81; KEGG: rfr:Rfer_1586 protein of unknown function DUF81
YP_736122.1	PFAM: NLP/P60 protein; KEGG: son:SO0061 lipoprotein, NLP/P60 family
YP_736123.1	PFAM: major facilitator superfamily MFS_1; KEGG: vch:VC1597 multidrug transporter, putative
YP_736124.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein, LacI; KEGG: hch:HCH_04796 transcriptional regulator
YP_736125.1	KEGG: atc:AGR_pTi_251 sucrose phosphorylase SplA; PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_736126.1	PFAM: major facilitator superfamily MFS_1; KEGG: ccr:CC1133 transporter, putative
YP_736127.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ccr:CC1136 TonB-dependent receptor
YP_736128.1	PFAM: PfkB domain protein; KEGG: csa:Csal_0931 PfkB
YP_736129.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
YP_736131.1	PFAM: helix-turn-helix- domain containing protein, AraC type; ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_B1553 transcriptional regulator, AraC family
YP_736132.1	KEGG: son:SO0068 hypothetical protein
YP_736133.1	KEGG: son:SO0069 transport protein, putative
YP_736134.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0070 ATP-binding transport protein NatA
YP_736135.1	PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: son:SO0071 hydrolase, alpha/beta hydrolase fold family
YP_736136.1	PFAM: regulatory protein GntR, HTH; KEGG: son:SO0072 transcriptional regulator, GntR family
YP_736137.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0073 ABC transporter, ATP-binding protein
YP_736138.1	KEGG: son:SO0074 hypothetical protein
YP_736139.1	PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO0075 AMP-binding family protein
YP_736140.1	PFAM: MORN variant repeat protein; KEGG: son:SO0076 hypothetical protein
YP_736141.1	PFAM: thioesterase superfamily protein; KEGG: son:SO0077 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_736142.1	PFAM: HPP family protein; KEGG: tdn:Tmden_1127 HPP
YP_736143.1	KEGG: son:SO0079 hypothetical protein
YP_736144.1	PFAM: thioesterase superfamily protein; KEGG: son:SO0080 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_736145.1	PFAM: regulatory protein, MerR; KEGG: sdn:Sden_1798 regulatory protein, MerR
YP_736146.1	PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: sdn:Sden_1799 NAD(P)H dehydrogenase (quinone)
YP_736147.1	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: vpa:VP1790 hypothetical protein
YP_736148.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO0084 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein
YP_736149.1	KEGG: son:SO0085 hypothetical protein
YP_736150.1	KEGG: son:SO4661 hypothetical protein
YP_736151.1	KEGG: son:SO0087 hypothetical protein
YP_736152.1	PFAM: protein of unknown function DUF885; KEGG: cps:CPS_3202 putative lipoprotein
YP_736153.1	PFAM: regulatory protein, MarR; KEGG: hch:HCH_03311 transcriptional regulator
YP_736154.1	PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: rba:RB11489 vulnibactin utilization protein VIUB
YP_736155.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_736156.1	TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: son:SO0096 histidine utilization repressor
YP_736157.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_736158.1	catalyzes the degradation of histidine to urocanate and ammmonia
YP_736159.1	KEGG: son:SO0098.1 formate dehydrogenase-N, nitrate-inducible, alpha subunit; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase Fe4S4 region
YP_736160.1	KEGG: son:SO0101 formate dehydrogenase, major subunit (formate dehydrogenase alpha subunit); TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region
YP_736161.1	TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO0102 formate dehydrogenase, iron-sulfur subunit (formate dehydrogenase beta subunit)
YP_736162.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO0103 formate dehydrogenase, cytochrome b556 subunit (formate dehydrogenase gamma subunit)
YP_736163.1	TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: son:SO0104 fdhE protein
YP_736164.1	catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis
YP_736165.1	TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: son:SO0106 selenocysteine-specific translation elongation factor
YP_736166.1	involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth
YP_736167.1	PFAM: protein of unknown function DUF395, YeeE/YedE; KEGG: son:SO0108 hypothetical transporter component
YP_736168.1	PFAM: SirA family protein; KEGG: son:SO0109 hypothetical protein
YP_736169.1	PFAM: peptidase M48, Ste24p; KEGG: son:SO0110 hypothetical protease
YP_736170.1	KEGG: son:SO0111 hypothetical protein
YP_736171.1	KEGG: son:SO0112 hypothetical protein
YP_736172.1	KEGG: son:SO0113 hypothetical protein
YP_736173.1	KEGG: son:SO0114 hypothetical protein
YP_736174.1	PFAM: protein of unknown function DUF1090; KEGG: son:SO0119 hypothetical protein
YP_736175.1	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO0121 hypothetical small-conductance mechanosensitive channel
YP_736176.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO0122 transporter, LysE family
YP_736177.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0123 acyltransferase family protein
YP_736178.1	KEGG: son:SO0125 hypothetical protein
YP_736179.1	PFAM: protein of unknown function DUF833; KEGG: son:SO0126 hypothetical protein
YP_736180.1	KEGG: son:SO0127 hypothetical protein
YP_736181.1	PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: son:SO0129 conserved hypothetical protein TIGR00427
YP_736182.1	PFAM: PKD domain containing protein; peptidase M6, immune inhibitor A; KEGG: son:SO0130 protease, putative
YP_736183.1	PFAM: Chorismate lyase; KEGG: son:SO0131 putative chorismate--pyruvate lyase
YP_736184.1	PFAM: flagellar basal body-associated protein FliL; KEGG: son:SO0132 flagellar protein FliL, putative
YP_736185.1	PFAM: protein of unknown function DUF890; KEGG: son:SO0134 hypothetical protein
YP_736186.1	PFAM: protein of unknown function DUF333; KEGG: son:SO0135 hemolysin protein, putative
YP_736187.1	KEGG: son:SO0136 hypothetical protein
YP_736188.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_736189.1	TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: son:SO0138 molybdopterin biosynthesis MoeA protein
YP_736190.1	PFAM: Ferritin, Dps family protein; KEGG: son:SO0139 ferritin
YP_736191.1	KEGG: son:SO0141 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_736192.1	DHBP synthase; functions during riboflavin biosynthesis
YP_736193.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO0144 protease II
YP_736194.1	PFAM: Excinuclease ABC, C subunit domain protein; KEGG: son:SO0145 hypothetical URI domain endonuclease
YP_736196.1	KEGG: bxe:Bxe_B0160 hypothetical protein
YP_736197.1	PFAM: regulatory protein, LysR; KEGG: ilo:IL1611 transcriptional regulator, LysR family
YP_736198.1	PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ilo:IL1610 acyl carrier protein phosphodiesterase
YP_736199.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sco:SCO4974 deaminase
YP_736201.1	KEGG: son:SO0150 lipoprotein, putative
YP_736202.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0151 hypothetical SAM-dependent methyltransferase
YP_736203.1	PFAM: peptidase M14, carboxypeptidase A; KEGG: son:SO0152 hypothetical carboxypeptidase
YP_736204.1	KEGG: son:SO0154 hypothetical protein
YP_736205.1	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO0157 proton/glutamate symporter
YP_736206.1	KEGG: son:SO0159 hypothetical protein
YP_736207.1	KEGG: ilo:IL0291 hypothetical protein
YP_736208.1	PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_01122 outer membrane protein and related peptidoglycan-associated (LipO)protein
YP_736209.1	PFAM: AbgT putative transporter; short chain fatty acid transporter; KEGG: son:SO0160 transporter, putative
YP_736210.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_736211.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_736212.1	PFAM: RNA-binding S4 domain protein; KEGG: son:SO0164 heat shock protein 15
YP_736213.1	TIGRFAM: general secretion pathway protein C; KEGG: son:SO0165 general secretion pathway protein C
YP_736214.1	TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D
YP_736215.1	KEGG: son:SO0167 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase
YP_736216.1	TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F
YP_736217.1	TIGRFAM: general secretion pathway protein G; PFAM: methylation site containing protein; Bacterial type II secretion system protein G; KEGG: son:SO0169 general secretion pathway protein G
YP_736218.1	KEGG: son:SO0170 general secretion pathway protein H
YP_736219.1	TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; methylation site containing protein; KEGG: son:SO0171 general secretion pathway protein I
YP_736220.1	TIGRFAM: general secretion pathway protein J; PFAM: methylation site containing protein; KEGG: son:SO0172 general secretion pathway protein J
YP_736221.1	PFAM: General secretion pathway protein K; KEGG: son:SO0173 general secretion pathway protein K
YP_736222.1	TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: son:SO0174 general secretion pathway protein L
YP_736223.1	PFAM: General secretion pathway M protein; KEGG: son:SO0175 general secretion pathway protein M
YP_736224.1	PFAM: type II secretion system protein N; KEGG: son:SO0176 general secretion pathway protein N
YP_736225.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO0177 HAD-superfamily hydrolase, subfamily IA, variant 3 protein family
YP_736226.1	KEGG: son:SO0189 fibronectin type III domain protein
YP_736227.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_736228.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: son:SO0191 cysQ protein
YP_736229.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0192 acetyltransferase, GNAT family
YP_736230.1	PFAM: regulatory protein, TetR; KEGG: son:SO0193 transcriptional regulator, TetR family
YP_736231.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0194 acyltransferase family protein
YP_736232.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_736233.1	catalyzes the formation of selenophosphate from selenide and ATP
YP_736234.1	PFAM: fatty acid desaturase; KEGG: son:SO0197 fatty acid desaturase, family 1
YP_736235.1	negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis
YP_736236.1	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
YP_736237.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_736238.1	PFAM: RNP-1 like RNA-binding protein; KEGG: son:SO0208 RNA-binding protein
YP_736239.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_736240.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
YP_736241.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_736242.1	KEGG: son:SO0216 hypothetical protein
YP_736243.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_736244.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_736245.1	KEGG: son:SO0219 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein
YP_736246.1	binds directly to 23S ribosomal RNA
YP_736247.1	in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA
YP_736248.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_736249.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_736250.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_736251.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_736252.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_736253.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_736254.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_736255.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_736256.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_736257.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_736258.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_736259.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_736260.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_736261.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_736262.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_736263.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_736264.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_736265.1	one of the stabilizing components for the large ribosomal subunit
YP_736266.1	primary binding protein; helps mediate assembly; involved in translation fidelity
YP_736267.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_736268.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_736269.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_736270.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_736271.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_736272.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_736273.1	binds 5S rRNA along with protein L5 and L25
YP_736274.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_736275.1	L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7
YP_736276.1	late assembly protein
YP_736277.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_736278.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_736279.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_736280.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_736281.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_736282.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_736283.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_736284.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_736285.1	PFAM: Heme exporter protein D (CcmD); KEGG: son:SO0260 heme exporter protein CcmD
YP_736286.1	TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: son:SO0261 heme exporter protein CcmC
YP_736287.1	TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: son:SO0262 heme exporter protein CcmB
YP_736288.1	ATP-binding protein; required for proper cytochrome c maturation
YP_736289.1	PFAM: cytochrome c, class I; KEGG: son:SO0264 cytochrome c
YP_736290.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO0265 cytochrome c-type biogenesis protein CcmH
YP_736291.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF
YP_736292.1	TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: son:SO0267 thiol:disulfide interchange protein DsbE
YP_736293.1	PFAM: cytochrome C biogenesis protein; KEGG: son:SO0268 cytochrome c-type biogenesis protein CcmH
YP_736294.1	PFAM: Redoxin domain protein; KEGG: son:SO0269 thioredoxin, putative
YP_736295.1	TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: son:SO0272 competence/damage-inducible protein CinA
YP_736296.1	PFAM: protein of unknown function DUF1439; KEGG: son:SO0273 hypothetical protein
YP_736297.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_736298.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_736299.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_736300.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_736301.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_736302.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_736303.1	TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: son:SO0280 penicillin-binding protein 1A
YP_736304.1	TIGRFAM: type IV pilus assembly protein PilM; KEGG: son:SO0281 type IV pilus biogenesis protein PilM
YP_736305.1	PFAM: Fimbrial assembly family protein; KEGG: son:SO0282 type IV pilus biogenesis protein PilN
YP_736306.1	PFAM: Pilus assembly protein, PilO; KEGG: son:SO0283 type IV pilus biogenesis protein PilO
YP_736307.1	PFAM: Pilus assembly protein, PilQ; KEGG: son:SO0284 type IV pilus biogenesis protein PilP
YP_736308.1	TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain protein; KEGG: son:SO0285 type IV pilus biogenesis protein PilQ
YP_736309.1	type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_736310.1	catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis
YP_736311.1	PFAM: Sporulation domain protein; KEGG: son:SO0288 DamX domain protein
YP_736312.1	KEGG: son:SO0289 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_736313.1	KEGG: son:SO0290 hypothetical protein
YP_736314.1	KEGG: son:SO0291 hypothetical protein
YP_736315.1	KEGG: son:SO0292 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase
YP_736316.1	KEGG: son:SO0293 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_736317.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_736318.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0295 transcriptional regulator, LysR family
YP_736319.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO0296 integral membrane domain protein
YP_736320.1	PFAM: transport-associated; KEGG: son:SO0297 lipoprotein, putative
YP_736321.1	TIGRFAM: phosphoheptose isomerase; KEGG: son:SO0298 phosphoheptose isomerase
YP_736322.1	PFAM: protein of unknown function UPF0102; KEGG: son:SO0299 predicted endonuclease
YP_736323.1	PFAM: LppC family lipoprotein; KEGG: son:SO0300 lipoprotein, putative
YP_736324.1	TIGRFAM: Protein of unknown function UPF0011; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: son:SO0301 hypothetical methyltransferase
YP_736325.1	KEGG: son:SO1432 hypothetical protein
YP_736326.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: son:SO1431 hypothetical protein
YP_736327.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1430 anaerobic dimethyl sulfoxide reductase, B subunit
YP_736328.1	TIGRFAM: Twin-arginine translocation pathway signal; anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO1429 anaerobic dimethyl sulfoxide reductase, A subunit
YP_736329.1	KEGG: son:SO1428 outer membrane protein
YP_736330.1	TIGRFAM: cytochrome C family protein; KEGG: son:SO1427 decaheme cytochrome c
YP_736331.1	KEGG: son:SO0302 hypothetical protein
YP_736332.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pmu:PM1282 unknown
YP_736333.1	PFAM: ferric-uptake regulator; KEGG: hch:HCH_01703 Fe2+/Zn2+ uptake regulation protein
YP_736334.1	KEGG: son:SO0306 hypothetical protein
YP_736335.1	PFAM: protein of unknown function DUF1212; KEGG: son:SO0308 hypothetical protein
YP_736336.1	KEGG: son:SO0309 hypothetical protein
YP_736337.1	PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: son:SO0311 hypothetical Fe-S oxidoreductase
YP_736338.1	PFAM: porin, Gram-negative type; KEGG: son:SO0312 outer membrane porin, putative
YP_736339.1	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system
YP_736340.1	PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: son:SO0314 ornithine decarboxylase, inducible
YP_736341.1	KEGG: vch:VCA1065 hypothetical protein
YP_736342.1	TIGRFAM: YbhB and YbcL; PFAM: PEBP family protein; KEGG: son:SO0316 hypothetical phosphatidylethanolamine-binding protein
YP_736343.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO0317 transcriptional regulator, AraC/XylS family
YP_736344.1	PFAM: porin, Gram-negative type; KEGG: cps:CPS_3847 porin
YP_736345.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO4515 formate dehydrogenase, C subunit, putative
YP_736346.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: dsy:DSY4601 uncharacterized component of anaerobic dehydrogenase
YP_736347.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY4602 putative oxidoreductase iron-sulfur subunit
YP_736348.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: dsy:DSY4603 putative anaerobic dehydrogenase
YP_736349.1	PFAM: Disulphide bond formation protein DsbB; KEGG: hpj:jhp0542 hypothetical protein
YP_736350.1	PFAM: regulatory protein, LysR; KEGG: vpa:VPA0299 putative transcription regulator protein
YP_736351.1	PFAM: protein of unknown function DUF1232; KEGG: son:SO0318 hypothetical protein
YP_736352.1	KEGG: son:SO0319 hypothetical protein
YP_736353.1	PFAM: acyltransferase 3; KEGG: son:SO0320 hypothetical protein
YP_736354.1	KEGG: son:SO0321 hypothetical protein
YP_736355.1	KEGG: son:SO0322 hypothetical protein
YP_736356.1	KEGG: son:SO0323 hypothetical protein
YP_736357.1	KEGG: son:SO0324 hypothetical protein
YP_736358.1	PFAM: DsrE family protein; KEGG: son:SO0325 DsrE-related protein
YP_736359.1	KEGG: son:SO0326 hypothetical protein
YP_736360.1	KEGG: son:SO0329 hypothetical protein
YP_736361.1	PFAM: protein of unknown function UPF0061; KEGG: son:SO0330 hypothetical protein
YP_736362.1	KEGG: son:SO0331 hypothetical protein
YP_736363.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_736364.1	PFAM: DSBA oxidoreductase; KEGG: son:SO0333 thiol:disulfide interchange protein DsbA
YP_736365.1	PFAM: protein of unknown function DUF1107; KEGG: son:SO0334 hypothetical protein
YP_736366.1	PFAM: protein of unknown function DUF904; KEGG: son:SO0335 hypothetical protein
YP_736367.1	PFAM: Na+/H+ antiporter NhaC; KEGG: son:SO0336 hypothetical Na+/H+ antiporter
YP_736368.1	PFAM: Endoribonuclease L-PSP; KEGG: son:SO0337 hypothetical translation initiation inhibitor, YjgF family
YP_736369.1	PFAM: Modulator of Rho-dependent transcription termination; KEGG: son:SO0339 hypothetical transcriptional antiterminator
YP_736370.1	PFAM: protein of unknown function DUF1223; KEGG: hch:HCH_00871 uncharacterized secreted protein
YP_736371.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_736372.1	KEGG: son:SO0341 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_736373.1	TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: son:SO0342 hypothetical protein
YP_736374.2	Catalyzes the conversion of citrate to isocitrate
YP_736375.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
YP_736376.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
YP_736377.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: son:SO0346 transcriptional regulator GntR family
YP_736378.1	PFAM: protein of unknown function DUF523; KEGG: ppu:PP5158 hypothetical protein
YP_736379.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0347 acyltransferase family protein
YP_736380.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0348 acyltransferase family protein
YP_736381.1	KEGG: son:SO0349 magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_736382.1	KEGG: son:SO0350 hypothetical protein
YP_736383.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO0351 DNA-binding response regulator, LuxR family
YP_736384.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: son:SO0352 sensor histidine kinase, putative
YP_736385.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO0353 TPR domain protein
YP_736386.1	TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: son:SO0354 sodium/calcium exchanger
YP_736387.1	PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO0355 AMP-binding protein
YP_736388.1	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO0358 endoribonuclease L-PSP, putative
YP_736389.1	KEGG: son:SO0359 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region
YP_736390.1	promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_736391.1	Essential for recycling GMP and indirectly, cGMP
YP_736392.1	KEGG: son:SO0362 hypothetical protein
YP_736393.1	KEGG: son:SO0363 hypothetical protein
YP_736394.1	PFAM: aminoglycoside phosphotransferase; KEGG: son:SO0364 hypothetical protein
YP_736395.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0365 hypothetical permeases of the major facilitator superfamily
YP_736396.1	KEGG: son:SO0366 hypothetical protein
YP_736397.1	PFAM: filamentation induced by cAMP protein Fic; KEGG: son:SO0367 hypothetical protein
YP_736398.1	PFAM: helix-turn-helix domain protein; KEGG: reu:Reut_A0999 helix-turn-helix motif
YP_736399.1	KEGG: sde:Sde_3690 hypothetical protein
YP_736401.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0369 transcriptional regulator, LysR family
YP_736402.1	manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily
YP_736403.1	KEGG: lpf:lpl0072 hypothetical protein
YP_736406.1	KEGG: stm:STM2745 putative inner membrane protein
YP_736407.1	PFAM: Prophage CP4-57 regulatory; KEGG: sdn:Sden_0315 prophage CP4-57 regulatory
YP_736408.1	KEGG: gvi:glr4338 hypothetical protein
YP_736409.1	KEGG: ypm:YP1154 hypothetical protein
YP_736410.1	PFAM: phage integrase family protein; KEGG: sdn:Sden_0317 phage integrase
YP_736411.1	TIGRFAM: conserved hypothetical protein; PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: son:SO4257 conserved hypothetical protein TIGR00255
YP_736412.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_736413.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_736414.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_736415.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: son:SO4252 prolyl oligopeptidase family protein
YP_736416.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_736417.1	catalyzes the formation of dUMP from dUTP
YP_736418.1	TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: son:SO4249 DNA/pantothenate metabolism flavoprotein
YP_736419.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_736420.1	required for 70S ribosome assembly
YP_736421.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_736422.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_736423.1	KEGG: son:SO4244 hypothetical protein
YP_736424.1	TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4243 rarD protein
YP_736425.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: son:SO4242 hypothetical protein
YP_736426.1	TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO4241 ATP-dependent DNA helicase RecQ
YP_736427.1	SMART: Tetratricopeptide domain protein; KEGG: son:SO4240 hypothetical protein
YP_736428.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_736429.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_736430.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_736431.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_736432.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sdn:Sden_0340 membrane protein involved in aromatic hydrocarbon degradation
YP_736433.1	TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: son:SO4230 glycerol kinase
YP_736434.1	KEGG: son:SO4229 hypothetical protein
YP_736435.1	PFAM: PepSY-associated TM helix domain protein; KEGG: sdn:Sden_0344 ferredoxin
YP_736436.1	KEGG: sdn:Sden_0345 PepSY-associated TM helix
YP_736437.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_736438.1	TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: son:SO4227 putative S-adenosyl methionine adenyltransferase
YP_736439.1	TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: son:SO4226 cell division protein FtsL
YP_736440.1	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: son:SO4225 peptidoglycan synthetase FtsI
YP_736441.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_736442.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: son:SO4223 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase
YP_736443.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_736444.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_736445.1	TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: son:SO4220 cell division protein FtsW
YP_736446.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_736447.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_736448.1	PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: son:SO4217 cell division protein FtsQ
YP_736449.1	TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: son:SO4216 cell division protein FtsA
YP_736450.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_736451.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_736452.1	KEGG: son:SO4213 hypothetical protein
YP_736453.1	PFAM: peptidase M23B; KEGG: son:SO4212 peptidase, M23/M37 family
YP_736454.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_736455.1	KEGG: vvy:VV2890 hypothetical protein
YP_736456.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_736457.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; KEGG: son:SO4207 GGDEF domain protein
YP_736458.1	PFAM: TatD-related deoxyribonuclease; KEGG: son:SO4206 hydrolase, TatD family
YP_736459.1	KEGG: son:SO4205 hypothetical protein
YP_736460.1	TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: son:SO4204 Sec-independent periplasmic protein translocation protein TatC
YP_736461.1	TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: son:SO4203 Sec-independent protein translocase protein TatB
YP_736462.1	TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: son:SO4202 Sec-independent protein translocase protein TatA
YP_736463.1	TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: son:SO4201 ubiquinone biosynthesis protein AarF
YP_736464.1	PFAM: protein of unknown function DUF1243; KEGG: son:SO4200 conserved hypothetical protein
YP_736465.1	TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4199 ubiquinone/menaquinone biosynthesis methlytransferase UbiE
YP_736466.1	PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: son:SO4198 arginase family protein
YP_736467.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_736468.1	KEGG: son:SO4196 hypothetical protein
YP_736469.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO4195 PAP2 family protein
YP_736470.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO4194 hypothetical protein
YP_736471.1	KEGG: son:SO4193 hypothetical protein
YP_736472.1	KEGG: son:SO4191 DedA family protein
YP_736473.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_736474.1	PFAM: conserved hypothetical protein 22; KEGG: son:SO4189 hypothetical protein
YP_736475.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ilo:IL2271 outer membrane protein
YP_736476.1	KEGG: sdn:Sden_0480 hypothetical protein
YP_736477.1	KEGG: son:SO4182 ATP-dependent protease La (LON) domain protein, putative
YP_736478.1	PFAM: pseudouridine synthase; KEGG: sdn:Sden_0482 pseudouridine synthase
YP_736479.1	KEGG: son:SO4180 hypothetical protein
YP_736480.1	PFAM: glycosyl transferase, family 2; chitin synthase; KEGG: son:SO4179 glycosyl transferase, group 2 family protein
YP_736481.1	KEGG: son:SO4178 hypothetical protein
YP_736482.1	KEGG: son:SO4177 hypothetical protein
YP_736483.1	KEGG: son:SO4176 hypothetical protein
YP_736484.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO4174 NAD dependent epimerase/dehydratase family protein
YP_736485.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4173 sensor histidine kinase
YP_736486.1	PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: son:SO4172 DNA-binding response regulator
YP_736487.1	KEGG: son:SO4171 hypothetical protein
YP_736488.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO4170 C factor cell-cell signaling protein
YP_736489.1	PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: son:SO4169 hypothetical protein
YP_736490.1	KEGG: ava:Ava_1916 predicted signal transduction protein containing NACHT domain
YP_736491.1	KEGG: pae:PA0571 hypothetical protein
YP_736492.1	PFAM: protein of unknown function DUF971; KEGG: son:SO4164 hypothetical protein
YP_736493.1	heat shock protein involved in degradation of misfolded proteins
YP_736494.1	heat shock protein involved in degradation of misfolded proteins
YP_736495.1	PFAM: methylation site containing protein; KEGG: son:SO4159 hypothetical protein
YP_736496.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO4157 DNA-binding response regulator
YP_736497.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4155 sensor histidine kinase
YP_736498.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO4150 transporter, putative
YP_736499.1	KEGG: son:SO4144 cytochrome c, putative
YP_736500.1	KEGG: son:SO4143 hypothetical protein
YP_736501.1	KEGG: son:SO4142 cytochrome c family protein
YP_736502.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO4139 hypothetical protein
YP_736503.1	PFAM: MscS Mechanosensitive ion channel; KEGG: pca:Pcar_0306 hypothetical protein
YP_736504.1	KEGG: son:SO4138 hypothetical protein
YP_736505.1	PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4136 decarboxylase, pyridoxal-dependent
YP_736506.1	PFAM: protein of unknown function DUF465; KEGG: son:SO4134 hypothetical protein
YP_736507.1	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway
YP_736508.1	KEGG: son:SO4131 hypothetical protein
YP_736509.1	PFAM: protein of unknown function DUF107; KEGG: son:SO4130 hypothetical protein
YP_736510.1	PFAM: band 7 protein; KEGG: son:SO4129 SPFH domain/Band 7 family protein
YP_736511.1	PFAM: band 7 protein; KEGG: son:SO4128 SPFH domain/Band 7 family protein
YP_736512.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: vvu:VV12207 hypothetical protein
YP_736513.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: vvy:VV2149 AraC-type DNA-binding domain-containing protein
YP_736514.1	KEGG: son:SO4126 hypothetical protein
YP_736515.1	PFAM: Sporulation domain protein; KEGG: son:SO4124 cell division protein FtsN, putative
YP_736516.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_736517.1	TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO4122 primosomal protein N'
YP_736518.1	KEGG: son:SO4121 hypothetical protein
YP_736519.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_736520.1	PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: son:SO4118 malate oxidoreductase, putative
YP_736521.1	regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules
YP_736522.1	KEGG: son:SO4114.2 hypothetical biogenesis protein MshI
YP_736523.1	KEGG: sdn:Sden_3350 hypothetical protein
YP_736524.1	KEGG: son:SO4114 MSHA biogenesis protein MshJ
YP_736525.1	KEGG: son:SO4113 MSHA biogenesis protein MshK
YP_736526.1	TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB, short N-terminal domain protein; KEGG: son:SO4112 MSHA biogenesis protein MshL
YP_736527.1	KEGG: son:SO4111 MSHA biogenesis protein MshM
YP_736528.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO4110 MSHA biogenesis protein MshN, putative
YP_736529.1	PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: son:SO4109 MSHA biogenesis protein MshE
YP_736530.1	PFAM: type II secretion system protein; KEGG: son:SO4108 MSHA biogenesis protein MshG
YP_736531.1	KEGG: son:SO4107 hypothetical protein
YP_736532.1	PFAM: methylation site containing protein; KEGG: son:SO4106 MSHA pilin protein MshB
YP_736533.1	PFAM: methylation site containing protein; KEGG: son:SO4105 MSHA pilin protein MshA
YP_736534.1	PFAM: methylation site containing protein; KEGG: son:SO4104 MSHA pilin protein MshC
YP_736535.1	PFAM: methylation site containing protein; KEGG: son:SO4103 MSHA pilin protein MshD
YP_736536.1	PFAM: methylation site containing protein; KEGG: son:SO4102 MSHA biogenesis protein MshO
YP_736537.1	KEGG: son:SO4101 MSHA biogenesis protein MshP
YP_736538.1	KEGG: son:SO4100 MSHA biogenesis protein MshQ
YP_736539.1	functions in MreBCD complex in some organisms
YP_736540.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_736541.1	PFAM: Rod shape-determining protein MreD; KEGG: son:SO4096 rod shape-determining protein MreD
YP_736542.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: son:SO4095 maf protein
YP_736543.1	involved in the processing of the 5'end of 16S rRNA
YP_736544.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO4093 hypothetical protein
YP_736545.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: son:SO4092 hydrolase, carbon-nitrogen family
YP_736546.1	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: son:SO4091 TldD protein
YP_736547.1	PFAM: outer membrane efflux protein; KEGG: son:SO4090 outer membrane efflux protein
YP_736548.1	PFAM: secretion protein HlyD family protein; KEGG: son:SO4089 HlyD family secretion protein
YP_736549.1	PFAM: ABC-2 type transporter; KEGG: son:SO4088 conserved hypothetical protein
YP_736550.1	KEGG: son:SO4087 conserved hypothetical protein
YP_736552.1	PFAM: amino acid permease-associated region; KEGG: son:SO4081 amino acid permease
YP_736553.1	PFAM: Ig domain protein, group 1 domain protein; KEGG: son:SO4080 hypothetical protein
YP_736554.1	PFAM: protein of unknown function DUF615; KEGG: son:SO4079 hypothetical protein
YP_736555.1	PFAM: peptidase U62, modulator of DNA gyrase; KEGG: son:SO4078 PmbA protein
YP_736556.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4077 TonB-dependent receptor, putative
YP_736557.1	KEGG: son:SO4075 hypothetical protein
YP_736558.1	PFAM: protein of unknown function DUF331; KEGG: son:SO4073 hypothetical protein
YP_736559.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_736560.1	PFAM: protein of unknown function DUF541; KEGG: son:SO4070 hypothetical protein
YP_736561.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4069 hypothetical protein
YP_736562.1	PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: vfi:VF1044 RNA-directed DNA polymerase
YP_736563.1	KEGG: vfi:VF1045 hypothetical protein
YP_736564.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_736566.1	PFAM: pentapeptide repeat protein; KEGG: son:SO4064 mcbg protein, putative
YP_736567.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4062 polysulfide reductase, subunit A
YP_736568.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4061 polysulfide reductase, subunit B
YP_736569.1	PFAM: Polysulphide reductase, NrfD; KEGG: son:SO4060 polysulfide reductase, subunit C
YP_736570.1	PFAM: protein of unknown function DUF81; KEGG: son:SO4058 hypothetical protein
YP_736571.1	when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis
YP_736572.1	KEGG: son:SO4056 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes
YP_736573.1	multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_736574.1	MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor
YP_736576.1	PFAM: regulatory protein, MarR; KEGG: son:SO4052 transcriptional regulator, MarR family
YP_736577.1	PFAM: secretion protein HlyD family protein; KEGG: son:SO4051 HlyD family secretion protein
YP_736578.1	KEGG: son:SO4050 hypothetical protein
YP_736579.1	KEGG: son:SO4048 cytochrome c family protein
YP_736580.1	PFAM: cytochrome c, class I; KEGG: son:SO4047 cytochrome c family protein
YP_736582.1	KEGG: son:SO4044 hypothetical protein
YP_736583.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: son:SO4043 TonB domain protein
YP_736584.1	KEGG: son:SO4042 hydratase/decarboxylase family protein
YP_736585.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4040 integral membrane domain protein
YP_736586.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO4039 hydrolase, haloacid dehalogenase-like family
YP_736587.1	KEGG: son:SO4035 hypothetical protein
YP_736588.1	PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO4034 ATP-dependent RNA helicase DeaD
YP_736589.1	PFAM: peptidase M20; peptidase M28; KEGG: son:SO4032 hypothetical protein
YP_736590.1	KEGG: son:SO4031 hypothetical protein
YP_736591.1	TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: son:SO4030 excinuclease ABC, A subunit
YP_736592.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4029 transporter, putative
YP_736593.1	TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: son:SO4028 single-strand binding protein
YP_736594.1	KEGG: cps:CPS_3019 hypothetical protein
YP_736595.1	PFAM: peptidase M16 domain protein; KEGG: son:SO4022 peptidase, M16 family
YP_736596.1	KEGG: son:SO4019 hypothetical protein
YP_736597.1	KEGG: son:SO4018 hypothetical protein
YP_736598.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: son:SO4017 transglycosylase, Slt family
YP_736599.1	PFAM: protein kinase; leucine-rich repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: son:SO4016 hypothetical protein
YP_736600.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO4013 hypothetical protein
YP_736601.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO0640 alcohol dehydrogenase, zinc-containing
YP_736602.1	KEGG: son:SO0691 hypothetical protein
YP_736603.1	PFAM: Aldose 1-epimerase; KEGG: son:SO0693 aldose 1-epimerase
YP_736604.1	KEGG: son:SO0694 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein
YP_736605.1	PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: son:SO0695 glutathione-regulated potassium-efflux system protein KefC, putative
YP_736606.1	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm
YP_736607.1	PFAM: CutA1 divalent ion tolerance protein; KEGG: son:SO0697 periplasmic divalent cation tolerance protein CutA
YP_736608.1	PFAM: FxsA cytoplasmic membrane protein; KEGG: son:SO0698 FxsA protein
YP_736609.1	KEGG: son:SO0699 hypothetical protein
YP_736610.1	PFAM: acriflavin resistance protein; KEGG: ppr:PBPRA2318 hypothetical transporter, AcrB/D/F family
YP_736611.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppr:PBPRA2319 hypothetical membrane-fusion protein
YP_736612.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0701 transcriptional regulator, LysR family
YP_736613.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO0702 MATE efflux family protein
YP_736614.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_736615.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_736616.1	KEGG: hch:HCH_03956 retron-type reverse transcriptase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); HNH endonuclease; Group II intron, maturase-specific domain protein; SMART: HNH nuclease
YP_736617.1	PFAM: helix-turn-helix domain protein; KEGG: son:SO0705 transcriptional regulator, Cro/CI family
YP_736618.1	PFAM: HipA domain protein; KEGG: son:SO0706 hypothetical protein
YP_736620.1	TIGRFAM: putative outer membrane adhesin like protein; PFAM: von Willebrand factor, type A; KEGG: tcx:Tcr_0105 VCBS
YP_736621.1	PFAM: regulatory protein, LysR; KEGG: vvu:VV20150 transcriptional regulator
YP_736622.1	PFAM: sulfatase; KEGG: vpa:VPA0683 putative arylsulfatase protein
YP_736623.1	PFAM: Radical SAM domain protein; KEGG: vpa:VPA0684 putative arylsulfatase regulator
YP_736624.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: vpa:VPA0685 MoxR-related protein
YP_736625.1	PFAM: protein of unknown function DUF58; KEGG: vpa:VPA0686 hypothetical protein
YP_736626.1	KEGG: vvy:VVA0665 hypothetical protein
YP_736627.1	PFAM: von Willebrand factor, type A; KEGG: vpa:VPA0688 hypothetical protein
YP_736628.1	PFAM: von Willebrand factor, type A; KEGG: vfi:VF1421 transporter
YP_736629.1	KEGG: vpa:VPA0690 hypothetical protein
YP_736630.1	KEGG: vpa:VP0621 putative nonspecific acid phosphatase precursor
YP_736631.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: pae:PA4486 4-carboxymuconolactone decarboxylase
YP_736632.1	KEGG: son:SO0720 hypothetical protein
YP_736633.1	KEGG: son:SO0721 hypothetical protein
YP_736634.1	KEGG: son:SO0725 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase
YP_736635.1	KEGG: neu:NE1275 hypothetical protein
YP_736636.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0726 ABC transporter, ATP-binding protein
YP_736638.1	PFAM: Thioredoxin domain; KEGG: son:SO0732 hypothetical protein
YP_736639.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: son:SO4539 serine protease, subtilase family
YP_736640.1	PFAM: Cold-shock protein, DNA-binding; Excalibur domain protein; SMART: Cold shock protein; KEGG: son:SO0733 cold shock domain family protein
YP_736641.1	KEGG: mag:amb2980 hypothetical 918 kDa protein Y4LL; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_736642.1	KEGG: son:SO0736 conserved hypothetical protein
YP_736643.1	PFAM: Alkaline phosphatase; KEGG: cps:CPS_3932 alkaline phosphatase family protein
YP_736644.1	PFAM: Alkaline phosphatase; KEGG: cps:CPS_3933 alkaline phosphatase family protein
YP_736645.1	KEGG: son:SO0766.1 hypothetical protein
YP_736646.1	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO0766 transcriptional regulator, AraC/XylS family
YP_736647.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO0765 threonine efflux protein, putative
YP_736648.1	KEGG: son:SO0764 hypothetical protein
YP_736649.1	KEGG: ppr:PBPRA1347 hypothetical protein
YP_736650.1	PFAM: isochorismatase hydrolase; KEGG: son:SO0762 isochorismatase family protein
YP_736651.1	PFAM: nitrogen regulatory protein P-II; KEGG: son:SO0761 nitrogen regulatory protein P-II 1
YP_736652.1	PFAM: Rh family protein/ammonium transporter; KEGG: son:SO0760 ammonium transporter
YP_736653.1	KEGG: son:SO0758 hypothetical protein
YP_736654.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO0757 TPR domain protein
YP_736655.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_736656.1	KEGG: son:SO0755 hypothetical protein
YP_736657.1	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0754 ABC transporter, ATP-binding protein
YP_736658.1	KEGG: son:SO0753 hypothetical protein
YP_736659.1	KEGG: son:SO0752 hypothetical protein
YP_736660.1	PFAM: ferredoxin-dependent glutamate synthase; KEGG: son:SO0750 glutamate synthase, putative
YP_736661.1	PFAM: Phosphoglycerate mutase; KEGG: son:SO0749 hypothetical protein
YP_736662.1	KEGG: son:SO0748 hypothetical protein
YP_736663.1	PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: son:SO0747 ferredoxin--NADP reductase
YP_736664.1	PFAM: Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO0746 glutathione S-transferase family protein
YP_736665.1	KEGG: son:SO0745 hypothetical protein
YP_736666.1	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein
YP_736667.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO0743 iron(III) ABC transporter, permease protein
YP_736668.1	PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: son:SO0742 iron(III) ABC transporter, ATP-binding protein
YP_736669.1	KEGG: son:SO0741 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_736670.1	TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: son:SO0740 melanin biosynthesis protein TyrA, putative
YP_736671.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sdn:Sden_2893 LysR, substrate-binding
YP_736672.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: son:SO0768 putative NADH-flavin reductase
YP_736673.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_736674.1	oxidizes malate to oxaloacetate
YP_736675.1	PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: son:SO0771 hypothetical protein
YP_736676.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO0772 oxidoreductase, short chain dehydrogenase/reductase family
YP_736677.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: son:SO0774 5-formyltetrahydrofolate cyclo-ligase family protein
YP_736678.1	PFAM: protein of unknown function DUF710; KEGG: son:SO0775 hypothetical protein
YP_736679.1	TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: son:SO0776 hypothetical protein
YP_736680.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO0777 2-octaprenyl-6-methoxyphenol hydroxylase
YP_736681.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO0778 oxidoreductase, FAD-binding, UbiH/Coq6 family
YP_736682.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_736683.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_736684.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_736685.1	KEGG: eca:ECA4448 hypothetical protein
YP_736686.1	KEGG: jan:Jann_2000 hypothetical protein
YP_736687.1	KEGG: son:SO0784 hypothetical protein
YP_736688.1	KEGG: son:SO0788 hypothetical protein
YP_736689.1	KEGG: son:SO0792 hypothetical protein
YP_736690.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: son:SO0987 methyl-accepting chemotaxis protein
YP_736691.1	KEGG: son:SO0793 hypothetical protein
YP_736692.1	TIGRFAM: uncharacterized domain; PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: sdn:Sden_0824 protein of unknown function DUF181
YP_736693.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO0796 GGDEF family protein
YP_736694.1	KEGG: son:SO0797 hypothetical protein
YP_736695.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0798 hypothetical protein
YP_736696.1	PFAM: protein of unknown function DUF985; KEGG: son:SO0799 hypothetical protein
YP_736697.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: son:SO0801 hypothetical protein
YP_736698.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO0802 MATE efflux family protein
YP_736699.1	KEGG: son:SO0804 hypothetical protein
YP_736700.1	PFAM: CBS domain containing protein; KEGG: son:SO0805 CBS domain protein
YP_736701.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: Alkaline phosphatase; KEGG: son:SO0806 alkaline phosphatase, putative
YP_736702.1	KEGG: son:SO0807 hypoxanthine-guanine phosphoribosyltransferase
YP_736703.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sdn:Sden_0469 glycerophosphoryl diester phosphodiesterase
YP_736704.1	KEGG: son:SO0808 hypothetical protein
YP_736705.1	PFAM: blue (type 1) copper domain protein; KEGG: son:SO0809 azurin precursor
YP_736706.1	catalyzes the formation of D-ribose 5-phosphate from ribose
YP_736707.1	Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific
YP_736708.1	KEGG: son:SO0812 hypothetical protein
YP_736709.1	KEGG: son:SO0813 hypothetical protein
YP_736710.1	KEGG: sdn:Sden_0728 hypothetical protein
YP_736711.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0815 TonB-dependent receptor C-terminal domain protein
YP_736712.1	KEGG: son:SO0816 hypothetical protein
YP_736713.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0817 transcriptional activator protein MetR
YP_736714.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_736715.1	KEGG: cps:CPS_1597 3-oxoadipate CoA-succinyl transferase, beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_736716.1	KEGG: cps:CPS_1598 3-oxoadipate CoA-succinyl transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_736717.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cps:CPS_0943 D-beta-hydroxybutyrate dehydrogenase
YP_736718.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: bps:BPSL2073 poly(3-hydroxybutyrate) depolymerase precursor
YP_736719.1	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis
YP_736720.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_736721.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: cps:CPS_0941 putative lipase
YP_736722.1	PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_0940 major facilitator family transporter
YP_736723.1	TIGRFAM: PAS sensor protein; PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator
YP_736724.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: cps:CPS_0937 DNA-binding response regulator, LuxR family
YP_736725.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cps:CPS_0936 TonB-dependent receptor
YP_736726.1	TIGRFAM: esterase, PHB depolymerase family; KEGG: cps:CPS_0935 putative polyhydroxyalkanoate depolymerase
YP_736727.1	KEGG: sde:Sde_3701 hypothetical protein
YP_736728.1	KEGG: cps:CPS_0652 hypothetical protein
YP_736729.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sde:Sde_3703 response regulator receiver domain protein (CheY-like)
YP_736730.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: cps:CPS_0650 sensor histidine kinase
YP_736731.1	PFAM: peptidase M50; KEGG: son:SO0823 hypothetical protein
YP_736732.1	KEGG: son:SO0824 hypothetical protein
YP_736733.1	PFAM: protein of unknown function DUF342; KEGG: son:SO0826 hypothetical protein
YP_736734.1	TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: son:SO3943 protease DegS
YP_736735.1	TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: son:SO3942 serine protease, HtrA/DegQ/DegS family
YP_736736.1	PFAM: AFG1-family ATPase; KEGG: son:SO3941 hypothetical protein
YP_736737.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_736738.1	forms a direct contact with the tRNA during translation
YP_736739.1	KEGG: son:SO3938 hypothetical protein
YP_736740.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_736741.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO3936 sodium-type flagellar protein MotX
YP_736742.1	KEGG: son:SO3935 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain protein; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein
YP_736743.1	Specifically methylates the ribose of guanosine 2251 in 23S rRNA
YP_736744.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3933 hypothetical protein
YP_736745.1	PFAM: protein of unknown function DUF481; KEGG: son:SO3931 putative salt-induced outer membrane protein
YP_736746.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_736747.1	binds single-stranded DNA at the primosome assembly site
YP_736748.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_736749.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_736750.1	KEGG: son:SO3918 hypothetical protein
YP_736751.1	KEGG: son:SO3917 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase
YP_736752.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
YP_736753.1	KEGG: son:SO3915 putative chemotaxis protein CheX
YP_736754.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO3914 TonB-dependent receptor, putative
YP_736755.1	PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO3913 putative hydroxylase
YP_736756.1	KEGG: eca:ECA1322 hypothetical protein
YP_736757.1	PFAM: bacteriophage CI repressor; KEGG: vvu:VV20710 predicted transcriptional regulator
YP_736759.1	PFAM: phage regulatory CII family protein; KEGG: spt:SPA2625 putative phage gene
YP_736760.1	KEGG: cps:CPS_0369 hypothetical protein
YP_736769.1	PFAM: bacteriophage replication gene A; KEGG: spt:SPA2623 putative phage gene
YP_736774.1	PFAM: helix-turn-helix domain protein
YP_736775.1	PFAM: phage transcriptional activator, Ogr/delta; KEGG: spt:SPA2622 putative phage gene
YP_736776.1	TIGRFAM: phage portal protein, PBSX family; PFAM: phage portal protein; KEGG: sgl:SG0244 putative phage capsid portal protein
YP_736777.1	PFAM: protein of unknown function DUF264; putative terminase ATPase subunit; KEGG: spt:SPA2620 putative phage gene
YP_736778.1	PFAM: phage capsid scaffolding; KEGG: yps:YPTB3141 hypothetical protein
YP_736779.1	TIGRFAM: phage major capsid protein, P2 family; PFAM: phage major capsid protein, P2; KEGG: yps:YPTB3142 probable phage protein
YP_736780.1	KEGG: hma:rrnAC2528 hypothetical protein
YP_736781.1	KEGG: spt:SPA2618 putative phage gene
YP_736782.1	KEGG: yps:YPTB3144 hypothetical protein
YP_736783.1	KEGG: hch:HCH_00391 hypothetical protein
YP_736784.1	KEGG: spt:SPA2615 putative phage gene
YP_736785.1	KEGG: hch:HCH_06772 probable phage protein
YP_736786.1	KEGG: psp:PSPPH_4963 prophage PSPPH06, putative tail tube protein
YP_736787.1	PFAM: zinc finger, DksA/TraR C4-type; KEGG: sil:SPO1411 C4-type zinc finger protein, DksA/TraR family
YP_736789.1	KEGG: pfl:PFL_0783 pesticin domain protein
YP_736790.1	KEGG: bxe:Bxe_B0490 hypothetical protein
YP_736792.1	KEGG: hch:HCH_00383 probable phage protein
YP_736793.1	TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: hch:HCH_00382 probable phage protein
YP_736794.1	KEGG: yps:YPTB3154 hypothetical protein
YP_736795.1	KEGG: yps:YPTB3155 putative bacteriophage protein
YP_736796.1	KEGG: hch:HCH_00379 probable phage protein
YP_736797.1	KEGG: hch:HCH_00378 hypothetical protein
YP_736798.1	KEGG: psp:PSPPH_4950 hypothetical protein
YP_736799.1	KEGG: plu:plu4050 hypothetical protein
YP_736800.1	KEGG: yps:YPTB3161 hypothetical protein
YP_736801.1	KEGG: vfi:VF2024 hypothetical protein
YP_736802.1	PFAM: phage integrase family protein; KEGG: cps:CPS_0354 site-specific recombinase, phage integrase family
YP_736803.1	TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: son:SO3912 TIM-barrel protein, yjbN family
YP_736804.1	KEGG: son:SO3910 hypothetical protein
YP_736805.1	PFAM: PspC domain protein; KEGG: son:SO3909 hypothetical protein
YP_736806.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO3908 enoyl-CoA hydratase/isomerase family protein
YP_736807.1	PFAM: protein of unknown function DUF461; KEGG: son:SO3907 hypothetical protein
YP_736808.1	KEGG: son:SO3906 hypothetical protein
YP_736809.1	KEGG: son:SO3905 hypothetical protein
YP_736810.1	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell
YP_736811.1	KEGG: son:SO3903 ADP-ribose pyrophosphatase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase
YP_736812.1	PFAM: protein of unknown function DUF1249; KEGG: son:SO3902 hypothetical protein
YP_736813.1	PFAM: metallophosphoesterase; Calcineurin phosphoesterase C-terminal domain protein; KEGG: son:SO3901 lacZ expression regulator
YP_736814.1	PFAM: protein of unknown function UPF0227; KEGG: son:SO3900 hypothetical protein
YP_736815.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_736816.1	KEGG: son:SO3898 L-sorbosone dehydrogenase, putative
YP_736817.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_736818.1	PFAM: porin, Gram-negative type; KEGG: son:SO3896 outer membrane porin, putative
YP_736819.1	KEGG: son:SO3896 outer membrane porin, putative
YP_736820.1	PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: son:SO3895 HesA/MoeB/ThiF family protein
YP_736821.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3894 sensor histidine kinase
YP_736822.1	KEGG: son:SO3892 hypothetical protein
YP_736823.1	TIGRFAM: hemerythrin-like metal-binding protein; PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; KEGG: son:SO3890 methyl-accepting chemotaxis protein
YP_736824.1	Part of the ABC transporter complex modABC involved in molybdenum import
YP_736825.1	part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE
YP_736826.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO3863 molybdenum ABC transporter, periplasmic molybdenum-binding protein
YP_736827.1	TIGRFAM: molybdate transport repressor, ModE; Molybdenum-pterin binding; PFAM: regulatory protein, LysR; TOBE domain protein; KEGG: son:SO3862 molybdenum transport regulatory protein ModE
YP_736828.1	TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: son:SO3861 iron-sulfur cluster-binding protein
YP_736829.1	SMART: extracellular solute-binding protein, family 3; KEGG: son:SO3860 hypothetical protein
YP_736830.1	KEGG: son:SO3859 cyclic nucleotide phosphodiesterase, putative; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein
YP_736831.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO3857 PAP2 family protein
YP_736832.1	KEGG: son:SO3856 hypothetical protein
YP_736833.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_736834.1	KEGG: dde:Dde_2987 transposase
YP_736835.1	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate
YP_736836.1	PFAM: protein of unknown function DUF1456; KEGG: son:SO3852 hypothetical protein
YP_736837.1	KEGG: vpa:VP2681 putative manganese transporter
YP_736838.1	PFAM: membrane-flanked domain; KEGG: son:SO3849 hypothetical protein
YP_736839.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sdn:Sden_0738 TonB-dependent receptor
YP_736840.1	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: sdn:Sden_0739 glutathione S-transferase-like protein
YP_736841.1	KEGG: son:SO3848 hypothetical protein
YP_736842.1	KEGG: son:SO3847 hypothetical protein
YP_736843.1	KEGG: son:SO3846 hypothetical protein
YP_736844.1	PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO3844 peptidase, M13 family
YP_736845.1	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_1090 pseudouridine synthase, Rsu
YP_736846.1	KEGG: son:SO3842 hypothetical protein
YP_736847.1	KEGG: son:SO3841 hypothetical protein
YP_736848.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO3840 RNA polymerase sigma-70 factor, ECF subfamily
YP_736849.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3838 methyl-accepting chemotaxis protein
YP_736850.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_736851.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_736852.1	TIGRFAM: outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; KEGG: son:SO3835 outer membrane lipoprotein LolB
YP_736853.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_736854.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_736855.1	TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: son:SO3832 hemK family protein
YP_736856.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3831 acetyltransferase, GNAT family
YP_736857.1	PFAM: Invasion gene expression up-regulator, SirB; KEGG: son:SO3830 hypothetical protein
YP_736858.1	KEGG: son:SO3829 hypothetical protein
YP_736859.1	PFAM: protein of unknown function DUF819; KEGG: son:SO3828 hypothetical protein
YP_736860.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_736861.1	KEGG: son:SO3822 hypothetical protein
YP_736862.1	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase
YP_736863.1	TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: cps:CPS_3995 ammonium transporter
YP_736864.1	PFAM: nitrogen regulatory protein P-II; KEGG: son:SO3819 nitrogen regulatory protein P-II
YP_736865.1	KEGG: son:SO3817 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein
YP_736866.1	PFAM: VanZ family protein; KEGG: son:SO3816 hypothetical protein
YP_736867.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_736868.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3814 AmpG protein, putative
YP_736869.1	KEGG: son:SO3813 hypothetical protein
YP_736870.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO3812 peptidyl-prolyl cis-trans isomerase A
YP_736871.1	PFAM: Uncharacterized lipoprotein; KEGG: son:SO3811 lipoprotein, putative
YP_736872.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: son:SO3810 OmpA-like transmembrane domain protein
YP_736873.1	KEGG: son:SO3808 hypothetical protein
YP_736874.1	KEGG: son:SO3807 sterol desaturase family protein
YP_736875.1	KEGG: cps:CPS_1725 hypothetical protein
YP_736876.1	TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: son:SO3805 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
YP_736877.1	TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: son:SO3804 phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative
YP_736878.1	KEGG: son:SO3803 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase
YP_736879.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3802 ABC transporter, ATP-binding protein
YP_736880.1	PFAM: ABC-2 type transporter; KEGG: son:SO3801 ABC transporter, permease protein
YP_736881.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; peptidase domain protein; KEGG: son:SO1915 serine protease, subtilase family
YP_736882.1	transcriptional repressor of asnA which codes for aspartate-ammonia ligase
YP_736883.1	PFAM: pseudouridine synthase; KEGG: sdn:Sden_3048 pseudouridylate synthase
YP_736884.1	PFAM: peptidase U32; KEGG: son:SO3797 peptidase, U32 family
YP_736885.1	PFAM: protein of unknown function DUF1696; KEGG: son:SO3796 hypothetical protein
YP_736886.1	PFAM: Abortive infection protein; KEGG: son:SO3795 hypothetical protein
YP_736887.1	KEGG: son:SO3794 hypothetical protein
YP_736888.1	PFAM: Cupin 2, conserved barrel domain protein; KEGG: son:SO3793 hypothetical protein
YP_736889.1	KEGG: son:SO3792 hypothetical protein
YP_736890.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: peptidase M19, renal dipeptidase; KEGG: son:SO3791 renal dipeptidase family protein
YP_736891.1	PFAM: Fe-S metabolism associated SufE; KEGG: son:SO3790 hypothetical protein
YP_736892.1	TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO3789 aminotransferase, class V
YP_736893.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: vch:VC1405 methyl-accepting chemotaxis protein
YP_736894.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO3783 ATP-dependent RNA helicase, DEAD box family
YP_736895.1	KEGG: son:SO3782 hypothetical protein
YP_736896.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_736897.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_736898.1	TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: son:SO3778 adenylate cyclase CyaB, putative
YP_736899.1	TIGRFAM: DNA binding domain, excisionase family; KEGG: son:SO3777 hypothetical protein
YP_736900.1	PFAM: protein of unknown function DUF599; KEGG: son:SO3776 hypothetical protein
YP_736901.1	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: eca:ECA0428 putative porin
YP_736902.1	KEGG: eca:ECA0429 hypothetical protein
YP_736903.1	KEGG: eca:ECA0430 hypothetical protein
YP_736904.1	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase
YP_736905.1	PFAM: LemA family protein; KEGG: atc:AGR_C_1138 lemA protein
YP_736906.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain
YP_736907.1	SMART: SH3 domain protein domain protein; KEGG: son:SO3772 SH3 domain protein
YP_736908.1	PFAM: phosphate transporter; KEGG: son:SO3771 phosphate transporter, putative
YP_736909.1	PFAM: protein of unknown function DUF47; KEGG: son:SO3770 conserved hypothetical protein TIGR00153
YP_736910.1	PFAM: adenylate cyclase; KEGG: son:SO3769 hypothetical protein
YP_736911.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: son:SO3768 ion transporter
YP_736912.1	KEGG: son:SO3767 hypothetical protein
YP_736913.1	KEGG: son:SO3766 hypothetical protein
YP_736914.1	PFAM: PspA/IM30 family protein; KEGG: son:SO3765 hypothetical protein
YP_736915.1	KEGG: son:SO3764 hypothetical protein
YP_736916.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_736917.1	PFAM: protein of unknown function DUF350; KEGG: son:SO3762 hypothetical protein
YP_736918.1	KEGG: son:SO3761 hypothetical protein
YP_736919.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_736920.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: son:SO3759 GGDEF domain protein
YP_736921.1	PFAM: protein of unknown function DUF897; KEGG: son:SO3758 hypothetical protein
YP_736922.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3757 rubisco operon transcriptional regulator
YP_736923.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vvu:VV12509 putative threonine efflux protein
YP_736924.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: vpa:VPA1564 hypothetical protein
YP_736925.1	PFAM: regulatory protein, MerR; KEGG: vpa:VPA1563 putative transcriptional regulator
YP_736926.1	PFAM: AFG1-family ATPase; KEGG: son:SO3756 hypothetical ATPase
YP_736927.1	PFAM: protein of unknown function DUF583; KEGG: sdn:Sden_0706 protein of unknown function DUF583
YP_736928.1	PFAM: phosphate-selective porin O and P; KEGG: pae:PA3279 outer membrane porin OprP precursor
YP_736929.1	PFAM: Uncharacterized protein UPF0065; KEGG: vpa:VP1651 putative tricarboxylic transport TctC
YP_736930.1	KEGG: vvy:VV1523 putative tricarboxylic transport membrane protein
YP_736931.1	PFAM: protein of unknown function DUF112, transmembrane; KEGG: vpa:VP1653 putative tricarboxylic transport TctA
YP_736932.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bld:BLi01245 hypothetical protein
YP_736933.1	PFAM: response regulator receiver; KEGG: vpa:VP1711 response regulator
YP_736934.1	PFAM: peptidase M16 domain protein; KEGG: son:SO3751 hypothetical protein
YP_736935.1	PFAM: peptidase M16 domain protein; KEGG: gvi:glr3686 probable peptidase
YP_736936.1	KEGG: son:SO3749 hypothetical protein
YP_736937.1	PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: son:SO3748 LysM domain protein
YP_736938.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_736939.1	KEGG: rfr:Rfer_1886 putative nitric oxide reductase (subunit B) transmembrane protein
YP_736940.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_736941.1	TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: son:SO3746 lipid A biosynthesis lauroyl acyltransferase
YP_736942.1	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose
YP_736943.1	KEGG: son:SO3744 hypothetical protein
YP_736944.1	PFAM: regulatory protein, TetR; KEGG: son:SO3743 transcriptional regulator, TetR family
YP_736945.1	KEGG: son:SO3741.1 hypothetical protein
YP_736946.1	catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme
YP_736947.1	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm
YP_736948.1	TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: son:SO3738 sulfite reductase (NADPH) flavoprotein alpha-component
YP_736949.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_736950.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_736951.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_736952.1	KEGG: son:SO3733 hypothetical protein
YP_736953.1	KEGG: son:SO3731 hypothetical protein
YP_736954.1	PFAM: phospholipase A1; KEGG: sdn:Sden_0955 phospholipase A1
YP_736955.1	TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: son:SO3728 uroporphyrin-III C-methyltransferase
YP_736956.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_736957.1	may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ
YP_736958.1	PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sdn:Sden_0961 TrkA-C
YP_736959.1	converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis
YP_736960.1	KEGG: son:SO3722 hypothetical protein
YP_736961.1	PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_0720 major facilitator superfamily MFS_1
YP_736962.1	KEGG: son:SO3720 protoporphyrinogen oxidase
YP_736963.1	KEGG: son:SO3719 hypothetical protein
YP_736964.1	KEGG: vpa:VP0375 putative lipoprotein
YP_736965.1	PFAM: DSBA oxidoreductase; KEGG: son:SO3718 thiol:disulfide interchange protein, DsbA family
YP_736966.1	PFAM: heat shock protein DnaJ domain protein; KEGG: son:SO3716 DnaJ domain protein
YP_736967.1	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive
YP_736968.1	PFAM: beta-lactamase domain protein; KEGG: vvy:VVA1481 alkyl sulfatase
YP_736969.1	KEGG: vvy:VVA1480 hypothetical protein
YP_736970.1	KEGG: rfr:Rfer_2516 hypothetical protein
YP_736972.1	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: bcn:Bcen_0332 glutathione-dependent formaldehyde-activating, GFA
YP_736973.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1042 amino acid ABC transporter, ATP-binding protein
YP_736974.1	TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1043 amino acid ABC transporter, permease protein
YP_736975.1	PFAM: extracellular solute-binding protein, family 3; KEGG: son:SO1044 amino acid ABC transporter, periplasmic amino acid-binding protein
YP_736976.1	KEGG: son:SO1045 hypothetical protein
YP_736977.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1046 transcriptional regulator, LysR family
YP_736978.1	PFAM: LrgA family protein; KEGG: son:SO1047 holin-like protein
YP_736979.1	PFAM: LrgB family protein; KEGG: son:SO1048 hypothetical protein
YP_736980.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1049 acetyltransferase, GNAT family
YP_736981.1	PFAM: carbon starvation protein CstA; KEGG: sdn:Sden_0907 carbon starvation protein CstA
YP_736982.1	involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans
YP_736983.1	PFAM: phosphate transporter; KEGG: son:SO1052 low-affinity inorganic phosphate transporter
YP_736984.1	PFAM: protein of unknown function DUF72; KEGG: son:SO1053.2 hypothetical protein
YP_736985.1	KEGG: son:SO1055 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_736986.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: son:SO1056 methyl-accepting chemotaxis protein
YP_736987.1	PFAM: EAL domain protein; KEGG: vpa:VP1768 hypothetical protein
YP_736988.1	TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1059 aminopeptidase N
YP_736989.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_736990.1	KEGG: dde:Dde_2987 transposase
YP_736991.1	KEGG: son:SO1060 hypothetical protein
YP_736992.1	PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO1061 TPR domain protein
YP_736993.1	KEGG: son:SO1062 polypeptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase
YP_736994.1	PFAM: SlyX family protein; KEGG: son:SO1063 SlyX protein
YP_736995.1	PFAM: WD-40 repeat protein; KEGG: son:SO1064 hypothetical WD domain protein
YP_736996.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1065 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA
YP_736997.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: son:SO1066 extracellular nuclease
YP_736998.1	KEGG: son:SO1067 hypothetical protein
YP_736999.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: son:SO1068 hypothetical protein
YP_737000.1	KEGG: son:SO1069 hypothetical protein
YP_737001.1	PFAM: Catalase domain protein; KEGG: son:SO1070 catalase
YP_737002.1	PFAM: protein of unknown function UPF0016; KEGG: son:SO1071 hypothetical protein
YP_737003.1	GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells
YP_737004.1	PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane; KEGG: son:SO1074 tyrosine-specific transport protein, putative
YP_737005.1	KEGG: son:SO1075 hypothetical protein
YP_737006.1	KEGG: hit:NTHI1201 hypothetical protein
YP_737007.1	PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_04311 outer membrane protein and related peptidoglycan-associated (LipO)protein
YP_737008.1	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_0685 pseudouridine synthase, Rsu
YP_737009.1	KEGG: son:SO1086 hypothetical protein
YP_737010.1	PFAM: Na+/H+ antiporter NhaC; KEGG: son:SO1087 Na+/H+ antiporter family protein
YP_737011.1	KEGG: tbd:Tbd_0710 hypothetical protein
YP_737012.1	PFAM: FMN-binding domain protein; KEGG: tbd:Tbd_0709 putative signal peptide protein
YP_737013.1	KEGG: son:SO1090 ApbE family protein, putative
YP_737014.1	KEGG: tcx:Tcr_0415 hypothetical protein
YP_737015.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ilo:IL2343 methyl-accepting chemotaxis protein (contains HAMP domain)
YP_737016.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1091 hypothetical protein
YP_737017.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO1092 transcriptional regulator, AraC/XylS family
YP_737018.1	KEGG: son:SO1094 hypothetical transcription elongation factor
YP_737019.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: stm:STM0361 cytochrome BD2 subunit II
YP_737020.1	PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: pae:PA3930 cytochrome bd-I oxidase subunit I
YP_737021.1	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: eca:ECA3004 putative bifunctional protein, includes [GntR-family transcriptional regulator and aminotransferase]
YP_737022.1	KEGG: son:SO1095 O-acetylhomoserine (thiol)-lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_737023.1	KEGG: son:SO1096 hypothetical protein
YP_737024.1	PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1097 putative ribosomal RNA small subunit methyltransferase D
YP_737025.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: son:SO1098 hypothetical alkylated DNA repair protein
YP_737026.1	PFAM: BolA family protein; KEGG: son:SO1099 bolA protein
YP_737027.1	PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: son:SO1100 extracellular solute-binding protein, family 7
YP_737028.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
YP_737029.1	PFAM: TonB-dependent receptor; KEGG: son:SO1102 TonB-dependent receptor C-terminal region domain lipoprotein
YP_737030.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_737031.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_737032.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_737033.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
YP_737034.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
YP_737035.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_737036.1	PFAM: ApbE family lipoprotein; KEGG: son:SO1109 thiamin biosynthesis lipoprotein ApbE
YP_737037.1	PFAM: protein of unknown function DUF539; KEGG: son:SO1110 hypothetical protein
YP_737038.1	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: son:SO1111 bacterioferritin subunit 2
YP_737039.1	TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: son:SO1112 bacterioferritin subunit 1
YP_737040.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO1112.1 hypothetical chemotactic transducer
YP_737041.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_737042.1	KEGG: son:SO1115 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_737043.1	PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: son:SO1117 cytosol aminopeptidase, putative
YP_737044.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ilo:IL1581 outer membrane receptor for ferric siderophore
YP_737045.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO1120 xanthine/uracil permease family protein
YP_737046.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_737047.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_737048.1	KEGG: son:SO1123 hypothetical protein
YP_737049.1	TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: son:SO1124 conserved hypothetical protein TIGR00011
YP_737050.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1125 integral membrane domain protein
YP_737051.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_737052.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_737054.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO1136 ATP-dependent RNA helicase, DEAD box family
YP_737055.1	PFAM: GCN5-related N-acetyltransferase; KEGG: bpm:BURPS1710b_2160 ribosomal-protein-serine acetyltransferase
YP_737056.1	PFAM: peptidase M48, Ste24p; KEGG: son:SO1137 hypothetical protein
YP_737057.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1139 peptidyl-prolyl cis-trans isomerase FklB
YP_737058.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_737059.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_737060.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_737061.1	KEGG: son:SO1143 hypothetical protein
YP_737062.1	PFAM: chemotaxis sensory transducer; KEGG: son:SO1144 methyl-accepting chemotaxis protein
YP_737063.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: son:SO1148 hypothetical protein
YP_737064.1	KEGG: sdn:Sden_0966 hypothetical protein
YP_737065.1	PFAM: protein of unknown function DUF692; KEGG: sdn:Sden_0967 protein of unknown function DUF692
YP_737066.1	KEGG: sdn:Sden_0968 putative lipoprotein
YP_737067.1	SMART: PUA domain containing protein; KEGG: son:SO1149 hypothetical SAM-dependent methyltransferase
YP_737068.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_737069.1	PFAM: protein of unknown function DUF808; KEGG: son:SO1151 hypothetical protein
YP_737070.1	PFAM: 3'-5' exonuclease; KEGG: son:SO1153 exonuclease, putative
YP_737071.1	KEGG: son:SO1154 hypothetical protein
YP_737072.1	PFAM: phage integrase family protein; KEGG: sgl:SG1173 phage integrase
YP_737077.1	KEGG: tbd:Tbd_1694 hypothetical protein
YP_737078.1	PFAM: replication P family protein; KEGG: hch:HCH_00598 hypothetical protein
YP_737082.1	KEGG: lpf:plpl0031 hypothetical protein
YP_737083.1	KEGG: tbd:Tbd_1820 TrwC protein
YP_737085.1	KEGG: sdn:Sden_0314 hypothetical protein
YP_737089.1	KEGG: rfr:Rfer_1065 hypothetical protein
YP_737090.1	KEGG: rfr:Rfer_1064 hypothetical protein
YP_737091.1	KEGG: pol:Bpro_4748 hypothetical protein
YP_737092.1	KEGG: pol:Bpro_4749 hypothetical protein
YP_737093.1	KEGG: tcx:Tcr_0373 hypothetical protein
YP_737094.1	KEGG: neu:NE2099 hypothetical protein
YP_737099.1	KEGG: son:SO1155 hypothetical protein
YP_737100.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1156 TonB-dependent receptor
YP_737101.1	KEGG: son:SO1157 hypothetical protein
YP_737102.1	PFAM: Ferritin, Dps family protein; KEGG: son:SO1158 Dps family protein
YP_737103.1	KEGG: son:SO1159 hypothetical protein
YP_737104.1	TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1160 ribosomal-protein-alanine acetyltransferase
YP_737105.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_737106.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_737107.1	PFAM: protein of unknown function DUF493; KEGG: son:SO1163 hypothetical protein
YP_737108.1	PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase
YP_737109.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: son:SO1165 rare lipoprotein A
YP_737110.1	TIGRFAM: lytic murein transglycosylase B; KEGG: son:SO1166 membrane-bound lytic transglycosylase, putative
YP_737111.1	TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: son:SO1167 rod shape-determining protein RodA
YP_737112.1	PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: son:SO1168 penicillin-binding protein 2
YP_737113.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_737114.1	TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: son:SO1170 iojap domain protein
YP_737115.1	KEGG: son:SO1171 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase
YP_737116.1	KEGG: son:SO1172 DNA polymerase III delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta
YP_737117.1	PFAM: Rare lipoprotein B; KEGG: son:SO1173 rare lipoprotein B
YP_737118.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_737119.1	PFAM: protein of unknown function DUF1451; KEGG: son:SO1175 hypothetical protein
YP_737120.1	PFAM: methylation site containing protein; KEGG: son:SO1176 hypothetical protein
YP_737121.1	Transfers the fatty acyl group on membrane lipoproteins
YP_737122.1	PFAM: CBS domain containing protein; transporter-associated region; KEGG: son:SO1178 magnesium and cobalt efflux protein CorC
YP_737123.1	PFAM: protein of unknown function UPF0054; KEGG: son:SO1179 conserved hypothetical protein TIGR00043
YP_737124.1	PFAM: PhoH family protein; KEGG: son:SO1180 PhoH family protein
YP_737125.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_737126.1	KEGG: son:SO1182 hypothetical protein
YP_737127.1	TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO1183 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
YP_737128.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_737129.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_737130.1	KEGG: son:SO1187 hypothetical protein
YP_737131.1	KEGG: son:SO1188 hypothetical protein
YP_737132.1	KEGG: son:SO1189 lysozyme
YP_737133.1	KEGG: son:SO1190 hypothetical protein
YP_737134.1	TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO1191 transcription elongation factor GreA
YP_737135.1	KEGG: son:SO1192 hypothetical protein
YP_737136.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_737137.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_737138.1	PFAM: protein of unknown function UPF0044; KEGG: son:SO1195 putative RNA-binding protein containing KH domain
YP_737139.1	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit
YP_737140.1	KEGG: son:SO1197 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_737141.1	KEGG: son:SO1198 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS
YP_737142.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_737143.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_737144.1	TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: son:SO1201 preprotein translocase, SecG subunit
YP_737145.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_737146.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_737147.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_737148.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_737149.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_737150.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_737151.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO1208 GGDEF domain protein
YP_737152.1	KEGG: son:SO1209 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein
YP_737153.1	lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing
YP_737154.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_737155.1	PFAM: TatD-related deoxyribonuclease; KEGG: son:SO1213 hydrolase, TatD family
YP_737156.1	TIGRFAM: nucleoside transporter; PFAM: Na dependent nucleoside transporter; nucleoside recognition domain protein; Na dependent nucleoside transporter domain protein; KEGG: son:SO1214 NupC family protein
YP_737157.1	PFAM: nucleoside-specific channel-forming protein, Tsx; KEGG: son:SO1215 outer membrane protein OmpK, putative
YP_737158.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_737159.1	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
YP_737160.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_737161.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
YP_737162.1	KEGG: son:SO1222 membrane protein
YP_737163.1	KEGG: son:SO1223 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase
YP_737164.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO1224 hypothetical protein
YP_737165.1	PFAM: type IV pilus assembly PilZ; KEGG: son:SO1225 hypothetical protein
YP_737166.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_737167.1	PFAM: type IV pilus assembly PilZ; KEGG: son:SO1227 hypothetical protein
YP_737168.1	response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes
YP_737169.1	periplasmic sensory protein associated with the TorRS two-component regulatory system
YP_737170.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; KEGG: son:SO1230 sensor histidine kinase/response regulator TorS
YP_737171.1	TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor
YP_737172.1	TIGRFAM: Twin-arginine translocation pathway signal; trimethylamine-N-oxide reductase TorA; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: son:SO1232 trimethylamine-N-oxide reductase
YP_737173.1	TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: son:SO1233 tetraheme cytochrome c
YP_737174.1	PFAM: periplasmic nitrate reductase NapE; KEGG: son:SO1234 warning TorE protein
YP_737175.1	PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO1236 xanthine/uracil permease family protein
YP_737176.1	PFAM: CBS domain containing protein; KEGG: son:SO1237 acetoin utilization protein AcuB, putative
YP_737177.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO1238 acyltransferase family protein
YP_737178.1	PFAM: metallophosphoesterase; KEGG: son:SO1239 hypothetical protein
YP_737179.1	PFAM: phage integrase family protein; KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family
YP_737180.1	TIGRFAM: YD repeat protein; KEGG: sde:Sde_3020 hypothetical protein
YP_737182.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO0910 hypothetical protein
YP_737183.1	KEGG: eli:ELI_10575 hypothetical protein
YP_737184.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: cps:CPS_2536 conserved hypothetical protein
YP_737185.1	PFAM: nucleoside recognition domain protein; KEGG: son:SO1245 hypothetical protein
YP_737186.1	KEGG: son:SO1246 hypothetical protein
YP_737187.1	KEGG: son:SO1247 hypothetical protein
YP_737188.1	PFAM: peptidase U32; KEGG: son:SO1248 hypothetical peptidase
YP_737189.1	PFAM: peptidase U32; KEGG: son:SO1249 peptidase, U32 family
YP_737190.1	PFAM: Sterol-binding domain protein; KEGG: son:SO1250 hypothetical protein
YP_737191.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1251 ferredoxin, 4Fe-4S
YP_737192.1	PFAM: peptidase U32; KEGG: son:SO1252 peptidase, U32 family
YP_737193.1	KEGG: son:SO1254 hypothetical protein
YP_737194.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO1255 cyclic nucleotide phosphodiesterase, putative
YP_737195.1	PFAM: thioesterase superfamily protein; KEGG: son:SO1256 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_737196.1	PFAM: adenylosuccinate synthetase; KEGG: son:SO1258 adenylosuccinate synthetase, putative
YP_737197.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1259 transcriptional regulator, LysR family
YP_737198.1	SMART: extracellular solute-binding protein, family 3; KEGG: son:SO1260 hypothetical amino acid ABC transporter
YP_737199.1	PFAM: OsmC family protein; KEGG: son:SO3495 hypothetical protein
YP_737200.1	PFAM: regulatory protein, TetR; KEGG: son:SO3494 transcriptional regulator, TetR family
YP_737201.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3493 RND multidrug efflux membrane fusion protein MexE
YP_737202.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: son:SO3492 RND multidrug efflux transporter MexF
YP_737203.1	KEGG: son:SO3491 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region
YP_737204.1	PFAM: protein of unknown function DUF88; KEGG: son:SO3490 hypothetical protein
YP_737205.1	PFAM: acriflavin resistance protein; KEGG: son:SO3484 AcrB/AcrD/AcrF family protein
YP_737206.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3483 HlyD family secretion protein
YP_737207.1	KEGG: son:SO3481 hypothetical protein
YP_737208.1	PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: son:SO3480 hypothetical protein phosphatase
YP_737209.1	KEGG: sdn:Sden_2716 type IV pilin biogenesis protein, putative
YP_737210.1	KEGG: son:SO3476 hypothetical protein
YP_737211.1	KEGG: son:SO3475 putative protein-disulfide isomerase
YP_737212.1	PFAM: beta-lactamase domain protein; KEGG: son:SO3474 metallo-beta-lactamase family protein
YP_737213.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3473 transcriptional regulator, LysR family
YP_737214.1	PFAM: conserved hypothetical protein 341; KEGG: rpd:RPD_2005 conserved hypothetical protein 341
YP_737215.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_737216.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_737217.1	TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone domain protein; KEGG: son:SO3470 ATP-cone domain protein
YP_737218.1	KEGG: son:SO3469 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein
YP_737219.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_737220.1	TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: son:SO3467 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative
YP_737221.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_737222.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_737223.1	KEGG: son:SO3464 thiamin-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein
YP_737224.1	PFAM: phosphatidylglycerophosphatase A; KEGG: son:SO3463 phosphatidylglycerophosphatase A
YP_737225.1	PFAM: UspA domain protein; KEGG: ilo:IL1305 UspA-related nucleotide-binding protein
YP_737226.1	TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: son:SO3462 DNA repair protein RecN
YP_737227.1	PFAM: Auxin Efflux Carrier; KEGG: son:SO3461 transporter, putative
YP_737228.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3460 transcriptional regulator, LysR family
YP_737229.1	KEGG: son:SO3459 hypothetical protein
YP_737230.1	PFAM: protein of unknown function DUF416; KEGG: son:SO3458 hypothetical protein
YP_737231.1	part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system
YP_737232.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_737233.1	KEGG: son:SO3455 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein
YP_737234.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO0910 hypothetical protein
YP_737236.1	TIGRFAM: YD repeat protein; KEGG: sde:Sde_3020 hypothetical protein
YP_737237.1	PFAM: phage integrase family protein; KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family
YP_737238.1	PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1378 GCN5-related N-acetyltransferase
YP_737239.1	KEGG: rpb:RPB_2974 hypothetical protein
YP_737240.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_737241.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_737242.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_737243.1	PFAM: Septum formation initiator; KEGG: son:SO3439 cell division protein FtsB
YP_737244.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_737245.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_737246.1	PFAM: tRNA pseudouridine synthase D, TruD; KEGG: son:SO3436 tRNA pseudouridine synthase D
YP_737247.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_737248.1	KEGG: son:SO3434 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_737249.1	PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: son:SO3433 lipoprotein NlpD
YP_737250.1	TIGRFAM: RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: son:SO3432 RNA polymerase sigma-38 factor
YP_737251.1	This protein performs the mismatch recognition step during the DNA repair process
YP_737252.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_737253.1	PFAM: regulatory protein RecX; KEGG: son:SO3429 regulatory protein RecX
YP_737254.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_737255.1	KEGG: son:SO3427 aspartokinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase
YP_737256.1	affects carbohydrate metabolism; has regulatory role in many processes
YP_737257.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_737258.1	PFAM: DNA polymerase III chi subunit, HolC; KEGG: son:SO3423 DNA polymerase III, chi subunit
YP_737259.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3422 ribosomal subunit interface protein
YP_737260.1	PFAM: cytochrome B561; KEGG: son:SO3421 b-type cytochrome, putative
YP_737261.1	PFAM: cytochrome c, class II; KEGG: son:SO3420 cytochrome c'
YP_737262.1	TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: son:SO3419 trp operon repressor
YP_737263.1	KEGG: son:SO3418 hypothetical protein
YP_737264.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO3417 peptidyl-prolyl cis-trans isomerase SlyD
YP_737265.1	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_737266.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_737267.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_737269.1	PFAM: extracellular solute-binding protein, family 3; KEGG: son:SO3412 extracellular solute-binding proteins, family 3 protein
YP_737270.1	PFAM: peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: son:SO3411 protease, putative
YP_737271.1	KEGG: son:SO3410 hypothetical protein
YP_737272.1	PFAM: OsmC family protein; KEGG: son:SO3409 OsmC/Ohr family protein
YP_737273.1	KEGG: son:SO3408 hypothetical protein
YP_737274.1	PFAM: PepSY-associated TM helix domain protein; KEGG: son:SO3407 hypothetical protein
YP_737275.1	KEGG: son:SO3406 hypothetical protein
YP_737276.1	KEGG: son:SO3404 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_737277.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3403 ribosomal subunit interface protein
YP_737278.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: sdn:Sden_3055 response regulator receiver
YP_737279.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: sdn:Sden_3054 histidine kinase, dimerisation and phosphoacceptor region
YP_737280.1	PFAM: isochorismatase hydrolase; KEGG: pfl:PFL_2630 isochorismatase family protein
YP_737281.1	PFAM: protein of unknown function DUF28; KEGG: son:SO3401 hypothetical protein
YP_737282.1	PFAM: chemotaxis sensory transducer; KEGG: cps:CPS_4961 methyl-accepting chemotaxis protein
YP_737283.1	KEGG: son:SO3395 hypothetical protein
YP_737284.1	PFAM: regulatory protein, TetR; KEGG: son:SO3393 transcriptional regulator, TetR family
YP_737285.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: son:SO3392 oxidoreductase, FMN-binding
YP_737286.1	PFAM: peptidase S16, lon domain protein; KEGG: son:SO3391 ATP-dependent protease, putative
YP_737287.1	KEGG: son:SO3389 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_737288.1	PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO3388 ATP-dependent RNA helicase, DEAD box family
YP_737289.1	KEGG: son:SO3387 hypothetical protein
YP_737290.1	PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: son:SO3386 hypothetical protein
YP_737291.1	PFAM: regulatory protein, MerR; KEGG: son:SO3385 transcriptional regulator, MerR family
YP_737292.1	PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: son:SO3384 deoxyribodipyrimidine photolyase
YP_737293.1	KEGG: son:SO3383 transcriptional regulator-related protein
YP_737294.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO3382 oxidoreductase, short-chain dehydrogenase/reductase family
YP_737295.1	PFAM: amine oxidase; KEGG: son:SO3381 hypothetical protein
YP_737296.1	PFAM: protein of unknown function DUF1365; KEGG: son:SO3380 hypothetical protein
YP_737297.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO3379 cyclopropane-fatty-acyl-phospholipid synthase
YP_737298.1	KEGG: son:SO3378 hypothetical protein
YP_737299.1	KEGG: son:SO3377 hypothetical protein
YP_737300.1	KEGG: son:SO3376 hypothetical protein
YP_737301.1	KEGG: son:SO3374.1 hypothetical protein
YP_737302.1	KEGG: son:SO3374 hypothetical protein
YP_737304.1	PFAM: cytochrome B561; KEGG: son:SO3371 hypothetical cytochrome B561
YP_737305.1	PFAM: YceI family protein; KEGG: son:SO3370 hypothetical protein
YP_737306.1	PFAM: Fe(II) trafficking protein YggX; KEGG: son:SO3369 hypothetical protein
YP_737307.1	TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: son:SO3368 A/G-specific adenine glycosylase
YP_737308.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_737309.1	PFAM: protein of unknown function DUF469; KEGG: son:SO3366 hypothetical protein
YP_737310.1	catalyzes the formation of glutamate from glutamine
YP_737311.1	KEGG: son:SO3364 hypothetical protein
YP_737312.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3363 transcriptional regulator, LysR family
YP_737313.1	PFAM: protein of unknown function DUF885; KEGG: son:SO3361 hypothetical protein
YP_737314.1	KEGG: son:SO3359 oxygen-independent coproporphyrinogen III oxidase, putative; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_737315.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_737316.1	KEGG: son:SO3357 hypothetical protein
YP_737317.1	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF167; KEGG: son:SO3356 hypothetical protein
YP_737318.1	PFAM: protein of unknown function YGGT; KEGG: son:SO3355 hypothetical protein
YP_737319.1	KEGG: son:SO3354 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein
YP_737320.1	TIGRFAM: Protein of unknown function UPF0001; PFAM: alanine racemase domain protein; KEGG: son:SO3352 conserved hypothetical protein TIGR00044
YP_737321.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: son:SO3351 twitching motility protein PilT
YP_737322.1	TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: son:SO3350 twitching motility protein PilU
YP_737323.1	PFAM: glutathione peroxidase; KEGG: son:SO3349 glutathione peroxidase, putative
YP_737324.1	KEGG: son:SO3348 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase
YP_737325.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_737326.1	PFAM: protein of unknown function DUF179; KEGG: son:SO3346 putative transcriptional regulator
YP_737327.1	involved in start site selection during the initiation of translation
YP_737328.1	KEGG: son:SO3344 hypothetical protein
YP_737329.1	KEGG: son:SO3343 hypothetical protein
YP_737330.1	PFAM: protein of unknown function UPF0126; KEGG: son:SO3342 hypothetical protein
YP_737331.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO3341 antioxidant, AhpC/TSA family
YP_737332.1	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO3340 hypothetical small-conductance mechanosensitive channel
YP_737333.1	PFAM: OmpA/MotB domain protein; KEGG: son:SO3339 OmpA family protein
YP_737334.1	PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO3338 L-allo-threonine aldolase
YP_737335.1	PFAM: KDPG and KHG aldolase; KEGG: son:SO3337 hypothetical protein
YP_737336.1	KEGG: son:SO3336 hypothetical protein
YP_737337.1	PFAM: protein of unknown function DUF980; KEGG: son:SO3335 hypothetical protein
YP_737338.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3334 GGDEF family protein
YP_737339.1	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO3333 transporter, putative
YP_737340.1	KEGG: son:SO3332 transcriptional regulator, CopG family
YP_737341.1	KEGG: son:SO3331 hypothetical protein
YP_737342.1	KEGG: son:SO3328 acetyltransferase, GNAT family
YP_737343.1	KEGG: son:SO3326 hypothetical protein
YP_737344.1	KEGG: son:SO3325 NrfJ-related protein
YP_737345.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3324 acetyltransferase, GNAT family
YP_737346.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3323 acetyltransferase, GNAT family
YP_737347.1	PFAM: Pirin domain protein domain protein; Cupin 2, conserved barrel domain protein; KEGG: vpa:VPA0042 hypothetical protein
YP_737348.1	PFAM: DoxX family protein; KEGG: son:SO3319 hypothetical protein
YP_737349.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3318 transcriptional regulator, LysR family
YP_737350.1	PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: son:SO3317 5'-nucleotidase, putative
YP_737351.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: son:SO3316 hypothetical protein
YP_737352.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_737353.1	KEGG: son:SO3314 fimbrial biogenesis and twitching motility protein, putative; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein
YP_737354.1	KEGG: son:SO3313 hypothetical protein
YP_737355.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_737356.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_737357.1	KEGG: son:SO3310 hypothetical protein
YP_737358.1	with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis
YP_737359.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_737360.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_737361.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_737362.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_737363.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: son:SO3291 cytidine/deoxycytidylate deaminase family protein
YP_737364.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_737365.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_737366.1	PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: son:SO3286 cytochrome bd-I oxidase subunit I
YP_737367.1	TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: son:SO3285 cytochrome bd-I oxidase subunit II
YP_737368.1	TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: sdn:Sden_1276 Cyd operon protein YbgT
YP_737369.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3282 methyl-accepting chemotaxis protein
YP_737370.1	PFAM: protein of unknown function DUF465; KEGG: son:SO3280 hypothetical protein
YP_737371.1	PFAM: acriflavin resistance protein; KEGG: son:SO3279 AcrB/AcrD/AcrF family protein
YP_737372.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3278 hypothetical protein
YP_737373.1	PFAM: regulatory protein, TetR; KEGG: son:SO3277 transcriptional regulator, TetR family
YP_737374.1	KEGG: son:SO3276 hypothetical protein
YP_737375.1	KEGG: son:SO3275 hypothetical protein
YP_737376.1	KEGG: son:SO3274 hypothetical protein
YP_737377.1	KEGG: son:SO3258 hypothetical protein
YP_737378.1	KEGG: son:SO3257 hypothetical protein
YP_737379.1	PFAM: protein of unknown function DUF400; KEGG: son:SO3256 hypothetical protein
YP_737380.1	PFAM: FlgN family protein; KEGG: son:SO3255 flagellar biosynthetic protein FlgN
YP_737381.1	PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: son:SO3254 negative regulator of flagellin synthesis FlgM
YP_737382.1	required for the assembly of the flagellar basal body P-ring
YP_737383.1	PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO3252 chemotaxis protein CheV
YP_737384.1	PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 12; KEGG: son:SO3251 chemotaxis protein methyltransferase CheR
YP_737385.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod
YP_737386.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_737387.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production
YP_737388.1	the hook connects flagellar basal body to the flagellar filament
YP_737389.2	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
YP_737390.1	makes up the distal portion of the flagellar basal body rod
YP_737391.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_737392.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_737393.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
YP_737394.1	TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_1312 flagellar hook-associated protein
YP_737395.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.
YP_737396.1	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: ilo:IL1136 flagellin
YP_737397.1	PFAM: flagellin domain protein; flagellin hook IN repeat protein; KEGG: ilo:IL1136 flagellin
YP_737398.1	PFAM: flagellar protein FlaG protein; KEGG: son:SO3236 flagellin FlaG
YP_737399.1	PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: son:SO3235 flagellar hook-associated protein FliD
YP_737400.1	flagellin specific chaperone
YP_737401.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; flagellar regulatory FleQ domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO3232 flagellar regulatory protein A
YP_737402.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: son:SO3231 flagellar regulatory protein B
YP_737403.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: son:SO3230 flagellar regulatory protein C
YP_737404.1	TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: son:SO3229 flagellar hook-basal body complex protein FliE
YP_737405.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_737406.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_737407.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_737408.1	involved in type III protein export during flagellum assembly
YP_737409.1	TIGRFAM: flagellar export protein FliJ; KEGG: son:SO3224 flagellar protein FliJ
YP_737410.1	PFAM: flagellar hook-length control protein; KEGG: son:SO3223 flagellar hook-length control protein FliK
YP_737411.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_737412.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_737413.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_737414.1	PFAM: flagellar biosynthesis protein, FliO; KEGG: son:SO3219 flagellar protein FliO
YP_737415.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_737416.1	TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: son:SO3217 flagellar biosynthetic protein FliQ
YP_737417.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_737418.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_737419.1	membrane protein involved in the flagellar export apparatus
YP_737420.1	positive regulator of class III flagellar genes
YP_737421.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO3211 flagellar biosynthetic protein FlhG
YP_737422.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_737423.1	PFAM: response regulator receiver; KEGG: son:SO3209 chemotaxis protein CheY
YP_737424.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: son:SO3208 chemotaxis protein CheZ
YP_737425.1	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: son:SO3207 chemotaxis protein
YP_737426.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_737427.1	KEGG: son:SO3205 hypothetical protein
YP_737428.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO3204 ParA family protein
YP_737429.1	PFAM: CheW domain protein; KEGG: son:SO3203 CheW domain protein
YP_737430.1	PFAM: CheW domain protein; KEGG: son:SO3202 purine-binding chemotaxis protein CheW
YP_737431.1	KEGG: son:SO3200 hypothetical protein
YP_737432.1	KEGG: son:SO3199 FlhB domain protein
YP_737433.1	KEGG: son:SO3198 hypothetical protein
YP_737434.1	PFAM: VacJ family lipoprotein; KEGG: son:SO3197 vacJ lipoprotein, putative
YP_737435.1	PFAM: response regulator receiver; KEGG: son:SO3196 response regulator
YP_737436.1	TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: sdn:Sden_1357 amino acid/peptide transporter
YP_737437.1	KEGG: son:SO3194 transcriptional activator rfaH, putative; TIGRFAM: transcriptional activator RfaH; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein
YP_737438.1	PFAM: polysaccharide export protein; KEGG: son:SO3193 polysaccharide biosynthesis protein
YP_737439.1	crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown
YP_737440.1	PFAM: lipopolysaccharide biosynthesis; KEGG: son:SO3191 chain length determinant protein
YP_737441.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: ppr:PBPRA2711 hypothetical polysaccharide biosynthesis protein
YP_737442.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ppr:PBPRA2710 putative FlmB
YP_737443.1	PFAM: acylneuraminate cytidylyltransferase; KEGG: ppr:PBPRA2709 putative NeuA
YP_737444.1	PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp; protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: plu:plu0116 hypothetical protein
YP_737445.1	KEGG: bsu:BG10615 spore coat polysaccharide biosynthesis protein spsG
YP_737446.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: mlo:mlr2192 O-acetyltransferase, nodL candidate
YP_737447.1	PFAM: N-acetylneuraminic acid synthase, N-terminal domain protein; KEGG: wsu:WS2109 sialic acid synthase
YP_737448.1	PFAM: polysaccharide biosynthesis protein; KEGG: hin:HI1700 lsg locus hypothetical
YP_737450.1	PFAM: O-antigen polymerase; KEGG: ppr:PBPRA2679 predicted membrane protein
YP_737451.1	PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: ppr:PBPRA2677 hypothetical teichoic acid biosynthesis protein A
YP_737452.1	TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4; KEGG: ppr:PBPRA2673 hypothetical undecaprenylphosphateN-acetylglucosamine 1-phosphate transferase
YP_737453.1	TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: glycosyl transferase, family 4; KEGG: cps:CPS_2091 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase
YP_737454.1	TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: hit:NTHI1664 predicted phosphomannomutase
YP_737455.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO3167 dTDP-glucose 4,6-dehydratase
YP_737456.1	PFAM: protein of unknown function DUF886; KEGG: son:SO3164 hypothetical protein
YP_737457.1	PFAM: copper resistance lipoprotein NlpE; KEGG: son:SO3163 lipoprotein
YP_737458.1	PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO3162 sensor histidine kinase
YP_737459.1	TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: eba:ebA2277 glucose-1-phosphate thymidylyltransferase
YP_737460.1	KEGG: son:SO3160 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related
YP_737461.1	PFAM: protein of unknown function DUF940, membrane lipoprotein putative; KEGG: son:SO3159 hypothetical protein
YP_737462.1	PFAM: protein of unknown function DUF1017; KEGG: son:SO3158 polysaccharide synthesis-related protein
YP_737463.1	KEGG: son:SO3157 lipoprotein, putative
YP_737464.1	KEGG: son:SO3156.1 hypothetical protein
YP_737465.1	PFAM: Patatin; KEGG: son:SO3155 hypothetical protein
YP_737466.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_737467.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: son:SO3152 acetyltransferase, CysE/LacA/LpxA/NodL family
YP_737468.1	PFAM: protein of unknown function UPF0066; KEGG: son:SO3151 hypothetical protein
YP_737469.1	KEGG: son:SO3150 lipoprotein, putative
YP_737470.1	KEGG: son:SO3149 hypothetical protein
YP_737471.1	PFAM: amidohydrolase; KEGG: ilo:IL1717 secreted enzyme, contains two amidohydrolase related domains
YP_737472.1	PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: son:SO3146 DNA-binding protein, H-NS family
YP_737473.1	PFAM: electron transfer flavoprotein beta-subunit; KEGG: son:SO3145 electron transfer flavoprotein, beta subunit
YP_737474.1	PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: son:SO3144 electron transfer flavoprotein, alpha subunit
YP_737475.1	PFAM: Na+/H+ antiporter NhaC; KEGG: sdn:Sden_2537 Na+/H+ antiporter NhaC
YP_737476.1	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO3142 peptidyl-dipeptidase Dcp
YP_737477.1	KEGG: son:SO3140.2 hypothetical protein
YP_737478.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_737479.1	KEGG: sdn:Sden_3098 hypothetical protein
YP_737480.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO3138 C4-dicarboxylate transport transcriptional regulatory protein
YP_737481.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO3136.1 hypothetical two-component sensor histidine kinase protein
YP_737482.1	TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO3136 C4-dicarboxylate transport protein
YP_737483.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: son:SO3135 C4-dicarboxylate transporter, putative
YP_737484.1	TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: son:SO3134 C4-dicarboxylate-binding periplasmic protein
YP_737485.1	KEGG: son:SO3132 hypothetical protein
YP_737486.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_737487.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative
YP_737488.1	PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: son:SO3127 Ada regulatory protein, putative
YP_737489.1	KEGG: son:SO3126 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase
YP_737490.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO3125 ATP-dependent RNA helicase, DEAD box family
YP_737491.1	PFAM: Dual specificity protein phosphatase; KEGG: son:SO3124 tyrosine-specific protein phosphatase, putative
YP_737492.1	PFAM: phospholipase D/Transphosphatidylase; KEGG: vvy:VV1159 hypothetical protein
YP_737493.1	PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO3123 chemotaxis protein CheV
YP_737494.1	involved in the import of serine and threonine coupled with the import of sodium
YP_737495.1	KEGG: son:SO3121 hypothetical protein
YP_737496.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase domain protein; KEGG: son:SO3120 oxidoreductase, Gfo/Idh/MocA family
YP_737497.1	KEGG: son:SO3119 hypothetical protein
YP_737498.1	PFAM: pseudouridine synthase; KEGG: sdn:Sden_2524 pseudouridylate synthase
YP_737499.1	PFAM: Redoxin domain protein; KEGG: son:SO3117 thioredoxin, putative
YP_737500.1	PFAM: protein of unknown function DUF479; KEGG: son:SO3116 hypothetical protein
YP_737501.1	KEGG: son:SO3115 hypothetical protein
YP_737502.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_737503.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_737504.1	TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: son:SO3112 preprotein translocase, YajC subunit
YP_737505.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_737506.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_737507.1	KEGG: son:SO3109 hypothetical protein
YP_737508.1	PFAM: Rhodanese domain protein; KEGG: sdn:Sden_1406 rhodanese-like protein
YP_737509.1	TIGRFAM: siroheme synthase; KEGG: son:SO3108 precorrin-2 oxidase / ferrochelatase
YP_737510.1	PFAM: YaeQ family protein; KEGG: son:SO3107 hypothetical protein
YP_737511.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Proprotein convertase, P; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9, subtilisin propeptide; KEGG: son:SO3106 cold-active serine alkaline protease
YP_737512.1	PFAM: Rhodanese domain protein; KEGG: son:SO3105 phage shock protein E
YP_737513.1	KEGG: son:SO3104 hypothetical protein
YP_737514.1	PFAM: acriflavin resistance protein; KEGG: son:SO3103 AcrB/AcrD/AcrF family protein
YP_737515.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3102 AcrA/AcrE family protein
YP_737516.1	PFAM: protein of unknown function DUF541; KEGG: son:SO3101 hypothetical protein
YP_737517.1	KEGG: son:SO3100 hypothetical protein
YP_737518.1	PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO3099 long-chain fatty acid transport protein, putative
YP_737519.1	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: sdn:Sden_1520 sodium/proline symporter
YP_737520.1	KEGG: son:SO3097 hypothetical protein
YP_737521.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_737522.1	KEGG: son:SO3095 hypothetical protein
YP_737523.1	PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: von Willebrand factor, type A; Tetratricopeptide domain protein; KEGG: son:SO3094 TPR domain protein
YP_737524.1	PFAM: von Willebrand factor, type A; KEGG: son:SO3093 von Willebrand factor type A domain protein
YP_737525.1	KEGG: son:SO3092 hypothetical protein
YP_737526.1	PFAM: protein of unknown function DUF58; KEGG: son:SO3091 hypothetical protein
YP_737527.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: son:SO3090 MoxR domain protein
YP_737528.1	FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth
YP_737529.1	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate
YP_737530.1	KEGG: son:SO3087 hypothetical protein
YP_737531.1	KEGG: son:SO3085 hypothetical protein
YP_737532.1	KEGG: son:SO3084 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_737533.1	PFAM: peptidase M16 domain protein; KEGG: son:SO3083 peptidase, M16 family
YP_737534.1	TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: son:SO3082 phosphohistidine phosphatase SixA
YP_737535.1	PFAM: Smr protein/MutS2; KEGG: son:SO3081 Smr domain protein
YP_737536.1	involved in methylation of ribosomal protein L3
YP_737537.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_737538.1	PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: son:SO3078 major facilitator family protein, putative
YP_737539.1	PFAM: ATP-NAD/AcoX kinase; KEGG: son:SO3077 hypothetical protein
YP_737540.1	KEGG: son:SO3076 hypothetical protein
YP_737541.1	PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO3075 RNA methyltransferase, TrmH family, putative
YP_737542.1	PFAM: FAD dependent oxidoreductase; KEGG: son:SO3073 hypothetical protein
YP_737543.1	PFAM: beta-ketoacyl synthase; KEGG: son:SO3072 3-oxoacyl-(acyl-carrier-protein) synthase I
YP_737544.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO3071 erythronate-4-phosphate dehydrogenase
YP_737545.1	KEGG: son:SO3070 aspartate semialdehyde dehydrogenese; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region
YP_737546.1	KEGG: son:SO3069 putative membrane protein
YP_737547.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_737548.1	KEGG: son:SO3067 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein
YP_737549.1	PFAM: Sporulation domain protein; KEGG: son:SO3066 DedD protein
YP_737550.1	PFAM: Colicin V production protein; KEGG: son:SO3065 colicin V production protein
YP_737551.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_737552.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO3063 sodium:alanine symporter family protein
YP_737553.1	KEGG: son:SO3062 hypothetical protein
YP_737554.1	decatenates replicating daughter chromosomes
YP_737555.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO3055 proline iminopeptidase
YP_737556.1	PFAM: beta-lactamase domain protein; KEGG: son:SO3054 metallo-beta-lactamase family protein
YP_737557.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3052 methyl-accepting chemotaxis protein
YP_737558.1	PFAM: protein of unknown function DUF182; KEGG: son:SO3051 hypothetical xanthine dehydrogenase accessory factor
YP_737559.1	PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: son:SO3049 isoquinoline 1-oxidoreductase, alpha subunit, putative
YP_737560.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: son:SO3048 isoquinoline 1-oxidoreductase, beta subunit, putative
YP_737561.1	PFAM: protein of unknown function DUF1097; KEGG: son:SO3047 hypothetical protein
YP_737562.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: sdn:Sden_0861 chemotaxis sensory transducer
YP_737563.1	KEGG: son:SO3045 hypothetical protein
YP_737564.1	PFAM: GCN5-related N-acetyltransferase; KEGG: eca:ECA3191 putative acetyltransferase
YP_737565.1	KEGG: reu:Reut_B4688 hypothetical protein
YP_737566.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO0116 hypothetical protein
YP_737567.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: plu:plu0972 hypothetical protein
YP_737568.1	removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction
YP_737569.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_737570.1	Involved in cell division; probably involved in intracellular septation
YP_737571.1	PFAM: ferric iron reductase; KEGG: son:SO3034 ferric iron reductase protein, putative
YP_737572.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO3033 ferric alcaligin siderophore receptor
YP_737573.1	PFAM: IucA/IucC family protein; KEGG: son:SO3032 siderophore biosynthesis protein, putative
YP_737574.1	KEGG: son:SO3031 siderophore biosynthesis protein, putative
YP_737575.1	KEGG: son:SO3030 siderophore biosynthesis protein
YP_737576.1	KEGG: son:SO3029 hypothetical protein
YP_737577.1	KEGG: son:SO3027 hypothetical protein
YP_737578.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_737579.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_737580.1	monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate
YP_737581.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_737582.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_737583.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_737584.1	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: son:SO3017 TrpH family protein
YP_737585.1	TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain protein; KEGG: son:SO3016 Sua5/YciO/YrdC/YwlC family protein
YP_737586.1	PFAM: chromosome segregation and condensation protein ScpA; KEGG: son:SO3015 putative segregation and condensation protein A
YP_737587.1	TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: son:SO3014 putative segregation and condensation protein B
YP_737588.1	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_2436 pseudouridine synthase, Rsu
YP_737589.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO2935 short chain dehydrogenase
YP_737590.1	KEGG: son:SO2934 hypothetical protein
YP_737591.1	SohB; periplasmic protein; member of the peptidase S49 family
YP_737592.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO2932 transcriptional regulator, AraC family
YP_737593.1	KEGG: son:SO2931 hypothetical protein
YP_737594.1	KEGG: son:SO2930 hypothetical protein
YP_737595.1	PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: ade:Adeh_2257 hypothetical protein
YP_737596.1	PFAM: virulence factor family protein; KEGG: atc:AGR_C_4582 virulence gene acvB product
YP_737597.1	KEGG: son:SO2929 hypothetical protein
YP_737598.1	PFAM: lipolytic enzyme, G-D-S-L family; KEGG: son:SO2928 acyl-CoA thioesterase I, putative
YP_737599.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2927 ABC transporter, ATP-binding protein
YP_737600.1	PFAM: protein of unknown function DUF214; KEGG: son:SO2926 ABC transporter, permease, putative
YP_737601.1	KEGG: son:SO2924 signal peptidase I family protein; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B
YP_737602.1	TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: son:SO2923 sodium/glutamate symporter
YP_737603.1	TIGRFAM: conserved hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: son:SO2922 hypothetical protein
YP_737604.1	catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate
YP_737605.1	PFAM: protein of unknown function UPF0118; KEGG: son:SO2920 hypothetical protein
YP_737606.1	PFAM: conserved hypothetical protein 95; KEGG: son:SO2919 hypothetical protein
YP_737607.1	KEGG: son:SO4126 hypothetical protein
YP_737608.1	KEGG: son:SO2918 hypothetical protein
YP_737609.1	KEGG: son:SO2917 hypothetical protein
YP_737610.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_737611.1	KEGG: dde:Dde_2987 transposase
YP_737612.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_737613.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_737614.1	PFAM: protein of unknown function DUF412; KEGG: son:SO2914 hypothetical protein
YP_737615.1	activates pyruvate formate-lyase 1 under anaerobic conditions
YP_737616.1	KEGG: son:SO2912 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL
YP_737617.1	TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; KEGG: son:SO2911 formate transporter, putative
YP_737618.1	PFAM: C4-dicarboxylate anaerobic carrier; Na+/H+ antiporter NhaC; KEGG: vpa:VPA1014 putative S-transferase
YP_737619.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2907 TonB-dependent receptor domain protein
YP_737620.1	PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: son:SO2906 hypothetical protein
YP_737621.1	PFAM: O-methyltransferase, family 2; Methyltransferase type 12; KEGG: son:SO2905 O-methyltransferase, putative
YP_737622.1	TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: son:SO2903 cysteine synthase A
YP_737623.1	PFAM: RDD domain containing protein; KEGG: son:SO2902 hypothetical protein
YP_737624.1	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_737626.1	KEGG: son:SO2900 hypothetical protein
YP_737627.1	putative role in sulfur assimilation
YP_737628.1	TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: son:SO2898 SMC family protein
YP_737629.1	KEGG: son:SO2897 cell division protein ZipA; TIGRFAM: cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding region; SMART: cell division protein ZipA
YP_737630.1	KEGG: son:SO2896 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; NAD-dependent DNA ligase; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; SMART: Helix-hairpin-helix DNA-binding, class 1
YP_737631.1	KEGG: son:SO2863 hypothetical protein
YP_737632.1	TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: son:SO2862 HDIG domain protein
YP_737633.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: son:SO2861 hypothetical protein
YP_737634.1	PFAM: DSBA oxidoreductase; KEGG: son:SO2860 thiol:disulfide interchange protein, DsbA family
YP_737635.1	KEGG: son:SO2858 hypothetical protein
YP_737636.1	PFAM: Na+/solute symporter; KEGG: son:SO2857 sodium/solute symporter family protein
YP_737637.1	PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: son:SO2856 CBS domain protein
YP_737638.1	PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: son:SO2855 exonuclease
YP_737639.1	PFAM: regulatory protein, MarR; KEGG: ppr:PBPRB1157 putative transcriptional regulator, MarR family
YP_737640.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; KEGG: ppr:PBPRB1158 hypothetical alcohol dehydrogenase, zinc-containing
YP_737641.1	KEGG: son:SO2854 hypothetical protein
YP_737642.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis
YP_737643.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: son:SO2852 transcriptional regulator, GntR family
YP_737644.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_737645.1	KEGG: son:SO3571 hypothetical protein
YP_737646.1	periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate
YP_737647.1	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO3564 peptidyl-dipeptidase Dcp
YP_737648.1	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO3563 SM-20 domain protein
YP_737649.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2850 acetyltransferase, GNAT family
YP_737650.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2849 acetyltransferase, GNAT family
YP_737651.1	KEGG: son:SO2848 hypothetical protein
YP_737653.1	KEGG: son:SO1840 hypothetical protein
YP_737654.1	KEGG: son:SO1842 hypothetical protein
YP_737655.1	KEGG: son:SO1843 hypothetical protein
YP_737656.1	PFAM: PKD domain containing protein; Endonuclease/exonuclease/phosphatase; KEGG: son:SO1844 extracellular nuclease, putative
YP_737657.1	KEGG: son:SO1845 hypothetical protein
YP_737658.1	KEGG: son:SO1846 hypothetical protein
YP_737659.1	KEGG: son:SO1848 hypothetical protein
YP_737660.1	KEGG: son:SO1849 hypothetical protein
YP_737661.1	PFAM: heat shock protein DnaJ domain protein; KEGG: son:SO1850 DnaJ domain protein
YP_737662.1	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA
YP_737663.1	PFAM: glutaredoxin; glutaredoxin 2; KEGG: son:SO1852 hypothetical protein
YP_737664.1	Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth
YP_737665.1	KEGG: son:SO1854 hypothetical protein
YP_737666.1	PFAM: ribosome modulation factor; KEGG: son:SO1855 ribosome modulation factor
YP_737667.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_737668.1	KEGG: son:SO1857 hypothetical ATP-dependent protease
YP_737669.1	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system
YP_737670.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_737671.1	KEGG: son:SO1862 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_737672.1	PFAM: TM2 domain containing protein; KEGG: cps:CPS_1789 hypothetical protein
YP_737673.1	PFAM: histone family protein DNA-binding protein; KEGG: son:SO1863 DNA-binding protein, HU family
YP_737675.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: xac:XAC0928 extracellular protease
YP_737676.1	KEGG: ppr:PBPRB0541 hypothetical chitinase
YP_737677.1	PFAM: Sigma-70, region 4 type 2; KEGG: vpa:VP0055 putative RNA polymerase ECF-type sigma factor
YP_737678.1	PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: vpa:VP0057 hypothetical protein
YP_737679.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1865 ABC transporter, ATP-binding protein
YP_737680.1	KEGG: son:SO1866 hypothetical protein
YP_737681.1	PFAM: protein of unknown function DUF480; KEGG: son:SO1867 hypothetical protein
YP_737682.1	KEGG: son:SO1868 hypothetical protein
YP_737684.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_737685.1	PFAM: S-adenosylmethionine decarboxylase; KEGG: son:SO1871 S-adenosylmethionine decarboxylase proenzyme, putative
YP_737686.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_737687.1	PFAM: protein of unknown function DUF188; KEGG: son:SO2894 YaiI/YqxD family protein
YP_737688.1	PFAM: YceI family protein; KEGG: son:SO2893 hypothetical protein
YP_737689.1	KEGG: son:SO2891 hypothetical protein
YP_737690.1	KEGG: son:SO2890 hypothetical protein
YP_737691.1	PFAM: protein of unknown function DUF785; KEGG: sdn:Sden_2273 protein of unknown function DUF785
YP_737692.1	KEGG: son:SO2889 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_737693.1	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
YP_737694.1	involved in regulation of intracellular pH under alkaline conditions
YP_737695.1	Multifunctional regulator of fatty acid metabolism
YP_737696.1	PFAM: SpoVR family protein; KEGG: son:SO2884 hypothetical protein
YP_737697.1	PFAM: protein of unknown function DUF444; KEGG: son:SO2883 hypothetical protein
YP_737698.1	PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: son:SO2882 hypothetical Ser protein kinas
YP_737699.1	PFAM: manganese and iron superoxide dismutase; KEGG: son:SO2881 superoxide dismutase, Fe
YP_737700.1	TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: son:SO2880 glutaredoxin domain protein
YP_737701.1	TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: son:SO2879 uracil permease
YP_737702.1	KEGG: son:SO2878 hypothetical protein
YP_737703.1	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP
YP_737704.1	KEGG: son:SO1942 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region
YP_737705.1	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO1944 hypothetical protein
YP_737706.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO1945 sensor protein PhoQ
YP_737707.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO1946 transcriptional regulatory protein PhoP
YP_737708.1	KEGG: son:SO1947 hypothetical protein
YP_737709.1	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO1948 sodium:dicarboxylate symporter family protein
YP_737710.1	PFAM: Ig domain protein, group 1 domain protein; KEGG: son:SO1949 invasin domain protein
YP_737711.1	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation
YP_737712.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_737713.1	KEGG: son:SO2650 hypothetical protein
YP_737714.1	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation
YP_737715.1	PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: son:SO2648 DNA-binding response regulator, LuxR family
YP_737716.1	PFAM: thioesterase superfamily protein; KEGG: son:SO2647 cytosolic long-chain acyl-CoA thioester hydrolase family protein
YP_737717.1	tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
YP_737718.1	PFAM: protein of unknown function DUF299; KEGG: son:SO2645 hypothetical protein
YP_737719.1	PFAM: FAD linked oxidase domain protein; KEGG: son:SO2643 oxidoreductase, FAD-binding, putative
YP_737720.1	PFAM: protein of unknown function DUF1285; KEGG: son:SO2642 hypothetical protein
YP_737721.1	PFAM: regulatory protein, MarR; KEGG: son:SO2640 transcriptional regulator, MarR family
YP_737722.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: sco:SCO0432 probable secreted peptidase
YP_737723.1	KEGG: son:SO2639 hypothetical protein
YP_737724.1	PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: son:SO2638 leucine dehydrogenase
YP_737725.1	KEGG: son:SO2637 hypothetical protein
YP_737726.1	PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: son:SO2636 hypothetical protein
YP_737727.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_737728.1	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis
YP_737729.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_737730.1	PFAM: NUDIX hydrolase; KEGG: son:SO2631 MutT/nudix family protein
YP_737731.1	KEGG: sdn:Sden_1830 pseudouridine synthase, Rsu; TIGRFAM: Pseudouridine synthase, Rsu; PFAM: pseudouridine synthase
YP_737732.1	KEGG: son:SO2629 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type
YP_737733.1	PFAM: small multidrug resistance protein; KEGG: son:SO1901 sugE protein
YP_737734.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
YP_737735.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Proprotein convertase, P; KEGG: sdn:Sden_3045 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_737736.1	KEGG: sdn:Sden_3044 hypothetical protein
YP_737737.1	KEGG: son:SO1903 hypothetical protein
YP_737738.1	KEGG: ilo:IL1490 hypothetical protein
YP_737739.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1907 transcriptional regulator, LysR family
YP_737740.1	KEGG: son:SO1908 hypothetical protein
YP_737741.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: son:SO1909 hypothetical protein
YP_737742.1	TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: son:SO1910 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_737743.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO1911 oxidoreductase, short chain dehydrogenase/reductase family
YP_737744.1	KEGG: son:SO1912 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase
YP_737745.1	KEGG: son:SO1913 hypothetical protein
YP_737746.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1916 transcriptional regulator, LysR family
YP_737747.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO1917 multidrug resistance protein, putative
YP_737748.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: son:SO1918 MATE efflux family protein
YP_737749.1	KEGG: son:SO1921 hypothetical protein
YP_737750.1	PFAM: Uncharacterized conserved protein UCP029143; KEGG: son:SO1922 hypothetical protein
YP_737752.1	PFAM: acriflavin resistance protein; KEGG: son:SO1923 AcrB/AcrD/AcrF family protein
YP_737753.1	PFAM: acriflavin resistance protein; KEGG: son:SO1924 AcrB/AcrD/AcrF family protein
YP_737754.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO1925 HlyD family secretion protein
YP_737755.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_737756.1	PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: son:SO1927 succinate dehydrogenase, cytochrome b556 subunit
YP_737757.1	KEGG: son:SO1927.1 hypothetical succinate dehydrogenase, hydrophobic subunit
YP_737758.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_737759.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_737760.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_737761.1	TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: son:SO1931 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
YP_737762.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_737763.1	TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: son:SO1933 succinyl-CoA synthetase alpha chain
YP_737764.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO1935 regulator of nucleoside diphosphate kinase
YP_737765.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1936 acetyltransferase, GNAT family
YP_737766.1	negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer
YP_737767.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_737768.1	KEGG: son:SO1939 hypothetical protein
YP_737769.1	KEGG: son:SO1940 hypothetical protein
YP_737770.1	TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein, CorA family protein; KEGG: son:SO1941 magnesium and cobalt transport protein CorA
YP_737771.1	KEGG: son:SO2628 stress response protein CspD; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_737772.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_737773.1	KEGG: son:SO2626 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase
YP_737774.1	stimulates the activities of the other two initiation factors, IF-2 and IF-3
YP_737775.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_737776.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_737777.1	PFAM: 17 kDa surface antigen; KEGG: son:SO2622 hypothetical protein
YP_737778.1	PFAM: protein of unknown function DUF34; KEGG: son:SO2621 conserved hypothetical protein TIGR00486
YP_737779.1	PFAM: Auxin Efflux Carrier; KEGG: son:SO2620 hypothetical protein
YP_737780.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_737781.1	KEGG: son:SO2618 ATP-binding protein, Mrp/Nbp35 family
YP_737782.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
YP_737783.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_737784.1	PFAM: aminotransferase, class IV; KEGG: son:SO2615 4-amino-4-deoxychorismate lyase
YP_737785.1	PFAM: aminodeoxychorismate lyase; KEGG: son:SO2614 conserved hypothetical protein TIGR00247
YP_737786.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_737787.1	TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: son:SO2612 DNA polymerase III, delta prime subunit
YP_737788.1	KEGG: son:SO2611 type IV pilus biogenesis protein pilZ
YP_737789.1	TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: son:SO2610 hydrolase, TatD family
YP_737790.1	in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA
YP_737791.1	PFAM: nucleoside recognition domain protein; KEGG: son:SO2607 spore maturation protein A-related protein
YP_737792.1	PFAM: Mammalian cell entry related domain protein; KEGG: son:SO2606 PqiB family protein
YP_737793.1	PFAM: Paraquat-inducible protein A; KEGG: sdn:Sden_1717 paraquat-inducible protein A
YP_737794.1	PFAM: Paraquat-inducible protein A; KEGG: sdn:Sden_1718 paraquat-inducible protein A
YP_737795.1	PFAM: YebG family protein; KEGG: son:SO2604 hypothetical protein
YP_737796.1	PFAM: GAF domain protein; KEGG: son:SO2603 GAF domain-containing protein
YP_737797.1	affects solute and DNA transport through an unknown mechanism
YP_737798.1	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3
YP_737799.1	TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO2600 aminopeptidase N
YP_737800.1	KEGG: son:SO2598 hypothetical protein
YP_737801.1	PFAM: protein of unknown function DUF1302; KEGG: son:SO2597 hypothetical protein
YP_737802.1	PFAM: protein of unknown function DUF1329; KEGG: son:SO2596 hypothetical protein
YP_737803.1	KEGG: son:SO2595 BNR repeat protein
YP_737804.1	KEGG: son:SO2594 hypothetical protein
YP_737805.1	PFAM: NAD-glutamate dehydrogenase; KEGG: son:SO2593 hypothetical protein
YP_737806.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_737807.1	PFAM: protein of unknown function DUF1379; KEGG: son:SO2591 hypothetical protein
YP_737808.1	PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: son:SO2136 aldehyde-alcohol dehydrogenase
YP_737809.1	PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: son:SO2137 multiple antibiotic resistance protein
YP_737810.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: cps:CPS_1937 methyl-accepting chemotaxis protein
YP_737811.1	PFAM: phage integrase family protein; KEGG: vvy:VV2262 phage integrase
YP_737812.1	PFAM: protein of unknown function DUF86; KEGG: son:SO1440 hypothetical protein
YP_737813.1	PFAM: Integrase, catalytic region; KEGG: sdn:Sden_3580 integrase, catalytic region
YP_737814.1	KEGG: son:SO1441 hypothetical protein
YP_737815.1	PFAM: Prophage CP4-57 regulatory; KEGG: ecj:JW2604 DNA-binding transcriptional activator
YP_737816.1	KEGG: son:SO1442 hypothetical protein
YP_737817.1	KEGG: son:SO1443 hypothetical protein
YP_737819.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: son:SO1445 transcriptional regulator, CopG family
YP_737820.1	KEGG: son:SO1447 retinol acyltransferase domain protein
YP_737821.1	PFAM: phage integrase family protein; KEGG: son:SO1448 site-specific recombinase, phage integrase family
YP_737822.1	KEGG: son:SO1450 hypothetical protein
YP_737823.1	KEGG: son:SO1451 hypothetical protein
YP_737824.1	PFAM: YagBYeeUYfjZ family protein; KEGG: son:SO1453 hypothetical protein
YP_737825.1	KEGG: son:SO1454 hypothetical protein
YP_737826.1	TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: vfi:VFA0522 DNA repair protein RadC
YP_737827.1	PFAM: Prophage CP4-57 regulatory; KEGG: vvy:VV0515 predicted transcriptional regulator
YP_737829.1	KEGG: aci:ACIAD2439 transcriptional factor
YP_737830.1	KEGG: gme:Gmet_1202 hypothetical protein
YP_737831.1	KEGG: neu:NE2514 hypothetical protein
YP_737832.1	PFAM: N-6 DNA methylase; KEGG: vch:VC1769 DNA methylase HsdM, putative
YP_737833.1	PFAM: restriction modification system DNA specificity domain; KEGG: vch:VC1768 putative type I restriction enzyme, S subunit
YP_737834.1	KEGG: eli:ELI_14760 hypothetical protein
YP_737835.1	PFAM: protein of unknown function DUF262; KEGG: vch:VC1767 hypothetical protein
YP_737836.1	PFAM: protein of unknown function DUF262; KEGG: vch:VC1766 hypothetical protein
YP_737837.1	PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD/DEAH box helicase domain protein; KEGG: vch:VC1765 type I restriction enzyme HsdR, putative
YP_737838.1	KEGG: rme:Rmet_3356 ATP-binding region, ATPase-like protein
YP_737839.1	KEGG: rme:Rmet_3357 hypothetical protein
YP_737840.1	KEGG: hch:HCH_10029 hypothetical protein
YP_737841.1	PFAM: membrane-bound metal-dependent hydrolase; KEGG: mac:MA2196 hypothetical protein
YP_737842.1	KEGG: hch:HCH_06279 hypothetical protein
YP_737843.1	KEGG: hch:HCH_06278 hypothetical protein
YP_737844.1	KEGG: hch:HCH_06275 hypothetical protein
YP_737846.1	PFAM: phage integrase family protein; KEGG: vpa:VP2131 hypothetical protein
YP_737851.1	PFAM: Resolvase, N-terminal domain protein; KEGG: pst:PSPTO0298 resolvase, putative
YP_737852.1	KEGG: lic:LIC13455 hypothetical protein
YP_737853.1	KEGG: son:SO2248 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain
YP_737854.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_737855.1	PFAM: protein of unknown function UPF0227; KEGG: son:SO2251 conserved hypothetical protein
YP_737857.1	catalyzes the hydrolysis of acylphosphate
YP_737858.1	KEGG: son:SO2254 hypothetical protein
YP_737859.1	TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO2255 transcription-repair coupling factor
YP_737860.1	KEGG: son:SO2256 hypothetical protein
YP_737861.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: son:SO2257 lipoprotein releasing system transmembrane protein LolE
YP_737862.1	KEGG: son:SO2258 lipoprotein releasing system ATP-binding protein LolD; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase
YP_737863.1	TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: son:SO2259 lipoprotein releasing system transmembrane protein LolC, putative
YP_737864.1	PFAM: inositol monophosphatase; KEGG: son:SO2260 extragenic suppressor protein SuhB
YP_737865.1	TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO2261 RNA methyltransferase, TrmH family, group 1
YP_737866.1	TIGRFAM: serine O-acetyltransferase; KEGG: son:SO2262 serine acetyltransferase
YP_737867.1	TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: son:SO2263 Rrf2 family protein
YP_737868.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_737869.1	TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: son:SO2265 NifU family protein
YP_737870.1	TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: son:SO2266 HesB/YadR/YfhF family protein
YP_737871.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
YP_737872.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_737873.1	TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: son:SO2269 ferredoxin, 2Fe-2S
YP_737874.1	TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO2270 ribosomal protein S6 modification protein
YP_737875.1	PFAM: protein of unknown function DUF528; KEGG: son:SO2271 hypothetical protein
YP_737876.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_737877.1	PFAM: heat shock protein Hsp20; KEGG: son:SO2277 16 kDa heat shock protein A
YP_737878.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_737879.1	TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: son:SO2279 acetolactate synthase large subunit
YP_737880.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2280 bicyclomycin resistance protein
YP_737881.1	KEGG: son:SO2281 alkaline phosphatase
YP_737882.1	PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: son:SO2282 transcriptional regulator, GntR family
YP_737883.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO2285 hypothetical protein
YP_737884.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO2286 sulfate permease family protein
YP_737885.1	KEGG: sdn:Sden_2314 hypothetical protein
YP_737886.1	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO2288 glutathione-S-transferase domain protein
YP_737887.1	PFAM: Rhodanese domain protein; KEGG: son:SO2290 rhodanese domain protein
YP_737888.1	KEGG: son:SO2291 hypothetical protein
YP_737889.1	KEGG: son:SO2234 hypothetical protein
YP_737890.1	functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose
YP_737891.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: son:SO2237 phosphotransferase system, enzyme I
YP_737892.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: son:SO2238 phosphocarrier protein HPr
YP_737893.1	KEGG: son:SO2239 hypothetical protein
YP_737894.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: son:SO2240 methyl-accepting chemotaxis protein
YP_737895.1	KEGG: son:SO2241 hypothetical protein
YP_737896.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: son:SO2244 transcriptional regulator, LacI family
YP_737897.1	KEGG: son:SO2245 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_737898.1	KEGG: son:SO2146 hypothetical protein
YP_737899.1	TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: son:SO2147 exodeoxyribonuclease V, alpha subunit
YP_737900.1	TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: son:SO2148 exodeoxyribonuclease V, beta subunit
YP_737901.1	TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: son:SO2149 exodeoxyribonuclease V, gamma subunit
YP_737902.1	PFAM: transglutaminase domain protein; KEGG: son:SO2150 transglutaminase family protein
YP_737903.1	PFAM: protein of unknown function DUF58; KEGG: son:SO2151 hypothetical protein
YP_737904.1	PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: son:SO2153 MoxR protein
YP_737905.1	PFAM: SEFIR domain protein; KEGG: rba:RB4106 hypothetical protein-transmembrane prediction
YP_737906.1	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase
YP_737907.1	KEGG: sdn:Sden_3355 hypothetical protein
YP_737908.1	PFAM: EAL domain protein; KEGG: son:SO2039 hypothetical protein
YP_737909.1	PFAM: Lytic transglycosylase, catalytic; KEGG: son:SO2040 soluble lytic murein transglycosylase, putative
YP_737910.1	PFAM: protein of unknown function DUF195; KEGG: son:SO2041 hypothetical protein
YP_737911.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_737912.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_737913.1	KEGG: son:SO2044 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_737914.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: son:SO2045 cation efflux family protein
YP_737915.1	PFAM: regulatory protein, MarR; KEGG: son:SO2046 transcriptional regulator, MarR family
YP_737916.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO2047 prolyl oligopeptidase family protein
YP_737917.1	PFAM: sulfatase; protein of unknown function DUF1705; KEGG: son:SO2048 membrane protein, putative
YP_737918.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2049 GGDEF family protein
YP_737919.1	PFAM: regulatory protein, MarR; KEGG: ret:RHE_CH03358 probable transcriptional regulator protein, MarR family
YP_737920.1	PFAM: secretion protein HlyD family protein; KEGG: ret:RHE_CH03357 probable protein secretion protein, HlyD family
YP_737921.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mlo:mlr8233 efflux pump protein FarB
YP_737922.1	PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: son:SO2116 acetyltransferase, GNAT family
YP_737923.1	PFAM: chemotaxis sensory transducer; KEGG: son:SO2117 methyl-accepting chemotaxis protein
YP_737924.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: son:SO2118 SpoIIAA family protein
YP_737925.1	PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: son:SO2119 response regulator
YP_737926.1	PFAM: response regulator receiver; KEGG: son:SO2120 chemotaxis protein CheY
YP_737927.1	PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: son:SO2121 chemotaxis protein CheA
YP_737928.1	PFAM: CheW domain protein; KEGG: son:SO2122 purine-binding chemotaxis protein CheW
YP_737929.1	PFAM: chemotaxis sensory transducer; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: son:SO2123 methyl-accepting chemotaxis protein
YP_737930.1	PFAM: MCP methyltransferase, CheR-type; KEGG: son:SO2124 chemotaxis protein methyltransferase CheR
YP_737931.1	catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors
YP_737932.1	PFAM: CheB methylesterase; response regulator receiver; KEGG: son:SO2126 protein-glutamate methylesterase CheB
YP_737933.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; KEGG: son:SO2127 response regulator
YP_737935.1	KEGG: msu:MS2110 hypothetical protein
YP_737936.1	PFAM: Activator of Hsp90 ATPase family protein; KEGG: dar:Daro_4073 hypothetical protein
YP_737937.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2525 ABC transporter, ATP-binding protein
YP_737938.1	PFAM: phytase; KEGG: son:SO2524 phytase, putative
YP_737939.1	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2523 hypothetical TonB-dependent receptor
YP_737940.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2520 GGDEF domain protein
YP_737941.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: son:SO2519 transcriptional regulator, AraC family
YP_737942.1	KEGG: son:SO2518 hypothetical protein
YP_737943.1	KEGG: son:SO2517 hypothetical protein
YP_737944.1	PFAM: beta-lactamase domain protein; KEGG: aba:Acid345_0353 beta-lactamase-like
YP_737945.1	PFAM: PepSY-associated TM helix domain protein; KEGG: ilo:IL2512 uncharacterized iron-regulated membrane protein
YP_737946.1	KEGG: ilo:IL2513 hypothetical protein
YP_737947.1	PFAM: sulfatase; KEGG: vpa:VPA0600 putative arylsulfatase AtsD
YP_737948.1	PFAM: Radical SAM domain protein; KEGG: vpa:VPA0601 putative arylsulfatase regulator
YP_737949.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vpa:VPA0602 putative transcription activator NahR
YP_737950.1	KEGG: son:SO2515 hypothetical protein
YP_737951.1	KEGG: son:SO2514 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop
YP_737952.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
YP_737953.1	part of membrane-bound complex hought to be involved in electron transport to nitrogen
YP_737954.1	RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents
YP_737955.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_737956.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_737957.1	TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: son:SO2508 RnfAE/NqrDE family protein
YP_737958.1	PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO2507 GGDEF domain protein
YP_737960.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_737961.1	PFAM: Rhomboid family protein; KEGG: son:SO2504 hypothetical protein
YP_737962.1	YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His
YP_737963.1	KEGG: son:SO2501 radical activating enzyme
YP_737964.1	KEGG: son:SO2500 hypothetical protein
YP_737965.1	KEGG: son:SO2499 hypothetical protein
YP_737966.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: son:SO2498 sensory box protein
YP_737967.1	PFAM: SEC-C motif domain protein; KEGG: son:SO2497 conserved hypothetical protein
YP_737968.1	KEGG: son:SO2495.1 hypothetical protein
YP_737969.1	PFAM: Smr protein/MutS2; KEGG: son:SO2495 Smr domain protein
YP_737970.1	PFAM: peptidase M2, peptidyl-dipeptidase A; KEGG: son:SO2494 zinc-dependent metallopeptidase
YP_737971.1	PFAM: regulatory protein, TetR; KEGG: son:SO2493 transcriptional regulator, TetR family
YP_737972.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_737973.1	KEGG: son:SO2491 pyruvate kinase II; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase
YP_737974.1	Represses the expression of the zwf, eda, glp and gap
YP_737975.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_737976.1	TIGRFAM: 6-phosphogluconolactonase; KEGG: son:SO2488 6-phosphogluconolactonase
YP_737977.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_737978.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_737979.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_737980.1	PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: son:SO2484 hypothetical protein
YP_737981.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_737982.1	PFAM: Na+/H+ antiporter NhaC; KEGG: son:SO2481 hypothetical protein
YP_737983.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_737984.1	KEGG: son:SO2329 hypothetical protein
YP_737985.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_737986.1	PFAM: CopG domain protein DNA-binding domain protein; KEGG: son:SO2331 hypothetical protein
YP_737987.1	KEGG: son:SO2332 hypothetical protein
YP_737988.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: son:SO2333 hydrolase, alpha/beta fold family
YP_737989.1	negative modulator of the initiation of chromosome replication
YP_737990.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_737991.1	KEGG: son:SO2337 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A
YP_737992.1	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism
YP_737993.1	PFAM: dehydrogenase, E1 component; KEGG: son:SO2339 alpha keto acid dehydrogenase complex, E1 component, alpha subunit
YP_737994.1	PFAM: Transketolase, central region; Transketolase domain protein; KEGG: son:SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit
YP_737995.1	PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: son:SO2341 alpha keto acid dehydrogenase complex, E2 component
YP_737996.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_737997.1	PFAM: superoxide dismutase, copper/zinc binding; KEGG: tbd:Tbd_0659 superoxide dismutase, Cu-Zn
YP_737998.1	KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase
YP_737999.1	KEGG: son:SO2346 hypothetical protein
YP_738000.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent
YP_738001.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_738002.1	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: son:SO2351 hypothetical protein
YP_738003.1	KEGG: son:SO2352 bax protein, putative
YP_738004.1	KEGG: son:SO2353 hypothetical protein
YP_738005.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_738006.1	with UspC and UspD is involved in resistance to UV irradiation
YP_738007.1	Global transcription factor that controls the expression of over 100 target genes in response to anoxia
YP_738008.1	KEGG: son:SO2357 hypothetical protein
YP_738009.1	TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: son:SO2358 cytochrome oxidase maturation protein, cbb3-type
YP_738010.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: son:SO2359 cation transport ATPase, E1-E2 family
YP_738011.1	KEGG: son:SO2360 hypothetical protein
YP_738012.1	TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: son:SO2361 cytochrome c oxidase, cbb3-type, subunit III
YP_738013.1	PFAM: Cbb3-type cytochrome oxidase component; KEGG: son:SO2362 cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_738014.1	CcoO; FixO
YP_738015.1	CcoN; FixN
YP_738016.1	KEGG: son:SO2365 hypothetical protein
YP_738017.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO2366 response regulator
YP_738018.1	KEGG: sdn:Sden_1854 hypothetical protein
YP_738019.1	PFAM: phage integrase family protein; KEGG: sdn:Sden_1855 phage integrase
YP_738020.1	PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_B2143 hypothetical protein
YP_738021.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: ppr:PBPRB0783 hypothetical protein
YP_738022.1	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_3317 beta-xylosidase-like
YP_738023.1	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sde:Sde_2288 peptidase M24A, methionine aminopeptidase, subfamily 1
YP_738024.1	PFAM: protein of unknown function DUF81; KEGG: ilo:IL2350 predicted permease
YP_738025.1	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0791 alpha-L-arabinofuranosidase
YP_738026.1	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0786 arabinan endo-1,5-alpha-L-arabinosidase
YP_738027.1	TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_0776 MJ0042 finger-like region
YP_738028.1	PFAM: protein of unknown function DUF1680; KEGG: sde:Sde_0778 acetyl-CoA carboxylase, biotin carboxylase
YP_738029.1	PFAM: glycoside hydrolase, family 43; KEGG: cac:CAC1529 beta-xylosidase, family 43 glycosyl hydrolase
YP_738030.1	PFAM: glycoside hydrolase, family 43; KEGG: bha:BH1867 hypothetical protein
YP_738031.1	membrane component of a putative sugar ABC transporter system
YP_738032.1	PFAM: inner-membrane translocator; KEGG: sde:Sde_0768 conserved hypothetical ABC transporter permease protein YtfT
YP_738033.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_0767 putative sugar uptake ABC transporter ATP-binding protein
YP_738034.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sde:Sde_0766 putative LacI-type transcriptional regulator
YP_738035.1	PFAM: Aldose 1-epimerase; KEGG: gka:GK1877 aldose 1-epimerase
YP_738036.1	PFAM: short-chain dehydrogenase/reductase SDR; Insect alcohol dehydrogenase family; KEGG: sde:Sde_0771 transcriptional regulator, GntR family
YP_738037.1	catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate
YP_738038.1	PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0789 endo-1,4-beta-xylanase D precursor
YP_738039.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: ilo:IL0306 transcriptional regulator, FadR family
YP_738040.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sde:Sde_0770 putative phosphatase
YP_738041.1	catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism
YP_738042.1	catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source
YP_738043.1	catalyzes the phosphorylation of ribulose to ribulose 5-phosphate
YP_738044.1	KEGG: cps:CPS_0533 hypothetical protein
YP_738045.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_738046.1	KEGG: dde:Dde_2987 transposase
YP_738047.1	uncharacterized member of the major facilitator superfamily (MFS)
YP_738048.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2374 transcriptional regulator, LysR family
YP_738049.1	PFAM: protein of unknown function UPF0005; KEGG: son:SO2375 membrane protein, putative
YP_738050.1	PFAM: DsrE family protein; KEGG: son:SO2376 DsrE-related protein
YP_738051.1	PFAM: DsrE family protein; KEGG: son:SO2377 putative uncharacterized protein involved in oxidation of intracellular sulfur
YP_738052.1	PFAM: DsrH family protein; KEGG: son:SO2378 putative uncharacterized protein involved in oxidation of intracellular sulfur
YP_738053.1	PFAM: DsrC family protein; KEGG: son:SO2379 putative sulfite reductase
YP_738054.1	KEGG: son:SO2311 hypothetical protein
YP_738055.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_738056.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_738057.1	PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO2308 ATPase, AAA family
YP_738058.1	TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: son:SO2307 outer membrane lipoprotein carrier protein LolA
YP_738059.1	PFAM: cell divisionFtsK/SpoIIIE; KEGG: son:SO2306 cell division protein FtsK, putative
YP_738060.1	mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system
YP_738061.1	TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: sdn:Sden_1741 alanine dehydrogenase
YP_738062.1	KEGG: son:SO1485 hypothetical protein
YP_738063.1	TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2303 thioredoxin reductase
YP_738064.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_738065.1	TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: son:SO2301 50S ribosomal protein L35
YP_738066.1	IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits
YP_738067.1	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_738068.1	KEGG: son:SO2298 hypothetical protein
YP_738069.1	KEGG: son:SO2297 hypothetical protein
YP_738070.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_738071.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO2295 MATE efflux family protein
YP_738072.1	KEGG: eli:ELI_11055 hypothetical protein
YP_738073.1	KEGG: pha:PSHAb0175 conserved protein of unknown function ; putative lipoprotein
YP_738074.1	serine protease inhibitor, inhibits trypsin and other proteases
YP_738075.1	TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO2380 RecQ domain protein
YP_738076.1	KEGG: son:SO2381 hypothetical protein
YP_738077.1	KEGG: son:SO2383 hypothetical protein
YP_738078.1	PFAM: phage integrase family protein; KEGG: son:SO2384 site-specific recombinase, phage integrase family
YP_738079.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: protein of unknown function DUF839; KEGG: son:SO2385 hypothetical protein
YP_738080.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sat:SYN_02946 type I secretion outer membrane protein
YP_738081.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: bth:BT0305 putative aminoglycoside efflux pump (acriflavine resistance protein)
YP_738082.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bth:BT0304 acriflavine resistance protein A precursor
YP_738083.1	PFAM: DTW domain containing protein; KEGG: son:SO2387 conserved hypothetical protein
YP_738084.1	PFAM: beta-lactamase; KEGG: son:SO2388 beta-lactamase
YP_738085.1	multidrug efflux protein involved in adaptation to low energy shock
YP_738086.1	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome
YP_738087.1	KEGG: son:SO2391 hypothetical protein
YP_738088.1	KEGG: son:SO2393 hypothetical protein
YP_738089.1	KEGG: son:SO2394 penicillin-binding protein 4; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C
YP_738090.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_738091.1	KEGG: dde:Dde_2987 transposase
YP_738092.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO2395 acyl-CoA dehydrogenase family protein
YP_738093.1	KEGG: son:SO2396 hypothetical protein
YP_738094.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO2397 short chain dehydrogenase
YP_738095.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_738096.1	KEGG: son:SO2399 hypothetical protein
YP_738097.1	PFAM: protein of unknown function DUF1049; KEGG: son:SO2400 hypothetical protein
YP_738098.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_738099.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_738100.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_738101.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_738102.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_738103.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_738104.1	TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: son:SO2411 DNA gyrase subunit A
YP_738105.1	Involved in ubiquinone biosynthesis
YP_738106.1	KEGG: son:SO2414 phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase
YP_738107.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_738108.1	B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA
YP_738109.1	PFAM: ferredoxin; KEGG: son:SO2417 iron-sulfur cluster-binding protein
YP_738110.1	KEGG: sdn:Sden_2845 hypothetical protein
YP_738111.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_738112.1	KEGG: dde:Dde_2987 transposase
YP_738113.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2419 2,4-dienoyl-CoA reductase, putative
YP_738114.1	TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: son:SO2420 signal peptide peptidase SppA, 67K type
YP_738115.1	converts asparagine to aspartate and ammonia
YP_738116.1	PFAM: protein of unknown function DUF1315; KEGG: son:SO2422 hypothetical protein
YP_738117.1	KEGG: son:SO2423 hypothetical protein
YP_738118.1	PFAM: peptidase M14, carboxypeptidase A; KEGG: son:SO2424 zinc carboxypeptidase domain protein
YP_738119.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2426 DNA-binding response regulator
YP_738120.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2427 TonB-dependent receptor, putative
YP_738121.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_738122.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_738123.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_738124.1	PFAM: protein of unknown function DUF28; KEGG: son:SO2432 conserved hypothetical protein TIGR01033
YP_738125.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_738126.1	KEGG: son:SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3
YP_738127.1	TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO2435 methyltransferase, putative
YP_738128.1	TIGRFAM: putative methyltransferase; PFAM: methyltransferase, putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO2436 methyltransferase, putative
YP_738129.1	PFAM: protein of unknown function DUF785; KEGG: sdn:Sden_1891 protein of unknown function DUF785
YP_738130.1	KEGG: sdn:Sden_1892 gonadoliberin III-related protein
YP_738131.1	TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: sdn:Sden_1893 alpha-L-glutamate ligase-related protein
YP_738132.1	KEGG: son:SO2437 hypothetical protein
YP_738133.1	KEGG: sdn:Sden_1895 hypothetical protein
YP_738134.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2438 transcriptional regulator, LysR family
YP_738135.1	KEGG: son:SO2439 SrpA-related protein
YP_738136.1	KEGG: son:SO2439.2 hypothetical methyl-accepting chemotaxis protein
YP_738137.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center
YP_738138.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_738139.1	TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: son:SO2442 thiS protein, putative
YP_738140.1	PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: son:SO2443 thiF protein, putative
YP_738141.1	KEGG: son:SO2444 phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1
YP_738142.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_738143.1	KEGG: son:SO2446 hypothetical protein
YP_738144.1	TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: son:SO2447 channel protein, hemolysin III family subfamily
YP_738145.1	PFAM: NUDIX hydrolase; KEGG: son:SO2448 MutT/nudix family protein
YP_738146.1	KEGG: son:SO2449 hypothetical protein
YP_738147.1	KEGG: son:SO2450 alpha-glucosidase
YP_738148.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: ilo:IL2485 transcriptional regulator, AraC family
YP_738149.1	TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mlo:mll1641 hypothetical protein
YP_738150.1	KEGG: son:SO2451 hypothetical protein
YP_738151.1	KEGG: pcr:Pcryo_0089 alpha/beta hydrolase fold
YP_738152.1	PFAM: YCII-related; KEGG: son:SO2457 hypothetical protein
YP_738153.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2458 transporter, putative
YP_738154.1	KEGG: son:SO2459 glucoamylase; TIGRFAM: glucan 1,4-alpha-glucosidase; PFAM: glycoside hydrolase 15-related
YP_738155.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: pae:PA3927 probable transcriptional regulator
YP_738156.1	PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: mag:amb4188 di- and tricarboxylate transporters
YP_738157.1	PFAM: protein of unknown function DUF330; KEGG: noc:Noc_2723 protein of unknown function DUF330
YP_738158.1	PFAM: Mammalian cell entry related domain protein; KEGG: ppr:PBPRB1160 putative paraquat-inducible protein B
YP_738159.1	TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; KEGG: vpa:VP2017 paraquat-inducible protein A
YP_738160.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: vpa:VPA0362 putative outer membrane protein
YP_738161.1	PFAM: acriflavin resistance protein; KEGG: vpa:VPA0363 putative efflux protein
YP_738162.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: vpa:VPA0364 putative efflux protein
YP_738163.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: vpa:VPA0365 putative transcriptional regulator protein
YP_738164.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: vvy:VV0250 outer membrane receptor protein
YP_738165.1	TIGRFAM: conserved hypothetical protein; PFAM: arsenate reductase and related; KEGG: son:SO2470 hypothetical protein
YP_738166.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_738167.1	PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: son:SO2472 D-alanyl-D-alanine carboxypeptidase-related protein
YP_738168.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO2473 hydrolase, alpha/beta fold family
YP_738169.1	PFAM: carbonic anhydrase; KEGG: son:SO2474 carbonic anhydrase family protein
YP_738170.1	PFAM: aminotransferase, class V; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: son:SO2476 polysaccharide biosynthesis protein
YP_738171.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO2477 alcohol dehydrogenase, iron-containing
YP_738172.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_738173.1	KEGG: son:SO2479 hypothetical protein
YP_738174.1	PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_06505 histone acetyltransferase HPA2/related acetyltransferase
YP_738177.1	TIGRFAM: integron integrase; PFAM: phage integrase family protein; KEGG: son:SO2037 site-specific recombinase, phage integrase family
YP_738178.1	TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: sdn:Sden_1499 periplasmic nitrate reductase C-type cytochrome, NapC/NirT
YP_738179.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sdn:Sden_1498 nitrate reductase cytochrome c-type subunit (NapB)
YP_738180.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_738181.1	PFAM: NapD family protein; KEGG: sdn:Sden_1496 NapD
YP_738182.1	PFAM: periplasmic nitrate reductase NapE; KEGG: sdn:Sden_1495 periplasmic nitrate reductase NapE
YP_738183.1	KEGG: son:SO2229 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD/DEAH box helicase domain protein
YP_738184.1	PFAM: CBS domain containing protein; KEGG: son:SO2228 CBS domain protein
YP_738185.1	PFAM: peptidase T2, asparaginase 2; KEGG: son:SO2115 asparaginase family protein
YP_738186.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: son:SO2114 hypothetical protein
YP_738187.1	PFAM: protein of unknown function DUF490; KEGG: son:SO2113 hypothetical protein
YP_738188.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_738189.1	KEGG: son:SO2111 hypothetical protein
YP_738190.1	PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: son:SO2110 hypothetical protein
YP_738191.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO2109 hypothetical protein
YP_738192.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_738193.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_738194.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2105 sensor protein YgiY, putative
YP_738195.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2104 DNA-binding response regulator YgiX, putative
YP_738196.1	PFAM: ApbE family lipoprotein; KEGG: son:SO2103 ApbE family protein
YP_738197.1	KEGG: son:SO2102 hypothetical protein
YP_738198.1	KEGG: son:SO2101 lipoprotein, putative
YP_738199.1	PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: son:SO2100 thioredoxin family protein
YP_738200.1	KEGG: son:SO2099 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; Twin-arginine translocation pathway signal; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein
YP_738201.1	PFAM: nickel-dependent hydrogenase, large subunit; KEGG: son:SO2098 hydrogenase large chain
YP_738202.1	TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: son:SO2097 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit
YP_738203.1	TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52, hydrogen uptake protein; KEGG: son:SO2096 hydrogenase expression/formation protein
YP_738204.1	KEGG: son:SO2095 hypothetical protein
YP_738205.1	TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain protein; zinc finger, HypF domain protein; KEGG: son:SO2094 hydrogenase maturation protein HypF
YP_738206.1	TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: son:SO2093 hydrogenase accessory protein HypB
YP_738207.1	TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: son:SO2092 hydrogenase assembly chaperone hypC/hupF
YP_738208.1	TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: son:SO2091 hydrogenase expression/formation protein HypD
YP_738209.1	TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: son:SO2090 hydrogenase expression/formation protein HypE
YP_738210.1	TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: son:SO2089 hydrogenase expression/formation protein HypA
YP_738211.1	Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA
YP_738212.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_738213.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_738214.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_738215.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO2083 methyl-accepting chemotaxis protein
YP_738216.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ppr:PBPRB1825 hypothetical receptor
YP_738217.1	SMART: helicase c2; KEGG: son:SO2081 ATP-dependent helicase, DinG family
YP_738218.1	KEGG: son:SO2079 hypothetical protein
YP_738219.1	KEGG: son:SO2077 acyltransferase domain protein
YP_738220.1	KEGG: son:SO2076 hypothetical protein
YP_738221.1	KEGG: son:SO2075 hypothetical protein
YP_738222.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_738223.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_738224.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_738225.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate
YP_738226.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_738227.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_738228.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_738229.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis
YP_738230.1	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: son:SO2065 tyrosine-specific transport protein
YP_738231.1	KEGG: son:SO2064 hypothetical protein
YP_738232.1	KEGG: son:SO2063 hypothetical protein
YP_738233.1	PFAM: Uncharacterized conserved protein UCP025560; KEGG: son:SO2062 hypothetical protein
YP_738234.1	PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: hsa:1506 chymotrypsin-like
YP_738235.1	PFAM: putative esterase; KEGG: son:SO2055 esterase, putative
YP_738236.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO2054 alcohol dehydrogenase class III
YP_738237.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2053 transcriptional regulator, LysR family
YP_738238.1	PFAM: FAD dependent oxidoreductase; KEGG: son:SO2052 hypothetical oxidoreductase
YP_738239.1	PFAM: protein of unknown function DUF938; KEGG: son:SO2050 hypothetical protein
YP_738240.1	PFAM: peptidase S24, S26A and S26B; KEGG: son:SOA0013 umuD protein
YP_738241.1	PFAM: UMUC domain protein DNA-repair protein; KEGG: sdn:Sden_3235 DNA-directed DNA polymerase
YP_738242.1	KEGG: son:SO2225 hypothetical protein
YP_738243.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2224 acetyltransferase, GNAT family
YP_738244.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: son:SO2223 peptidase, putative
YP_738245.1	TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: son:SO2222 fumarate hydratase, class I, anaerobic, putative
YP_738246.1	TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: son:SO2221 para-aminobenzoate synthase, component I
YP_738247.1	PFAM: NUDIX hydrolase; KEGG: son:SO2220 MutT/nudix family protein
YP_738248.1	KEGG: son:SO2219 hypothetical protein
YP_738249.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_738250.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_738251.1	TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold-4 domain protein; KEGG: son:SO2216 sensory box protein
YP_738252.1	PFAM: Fmu (Sun) domain protein; KEGG: son:SO2215 sun protein, putative
YP_738253.1	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sdn:Sden_2027 glucose/galactose transporter
YP_738254.1	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: son:SO2213 alpha-glucosidase
YP_738255.1	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2162 TonB dependent receptor-related protein
YP_738256.1	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: sdn:Sden_2031 alpha amylase, catalytic region
YP_738257.1	PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: son:SO2156 alpha amylase family protein
YP_738258.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO2155 glyoxalase family protein
YP_738259.1	KEGG: cps:CPS_2680 hypothetical protein
YP_738260.1	KEGG: mcp:MCAP_0790 hypothetical protein
YP_738263.1	KEGG: son:SO2529 hypothetical protein
YP_738264.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_738265.1	PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: son:SO2532 methylated-DNA--protein-cysteine methyltransferase, putative
YP_738266.1	KEGG: son:SO2533 hypothetical protein
YP_738267.1	PFAM: glutamine amidotransferase, class-II; KEGG: son:SO2535 hypothetical amidotransferase
YP_738268.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_738269.1	PFAM: sodium/hydrogen exchanger; KEGG: son:SO2537 sodium/hydrogen exchanger family protein
YP_738271.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ret:RHE_CH02498 probable transcriptional regulator protein, LysR family
YP_738272.1	KEGG: son:SO1412 hypothetical protein
YP_738274.1	KEGG: son:SO3623 tetraheme cytochrome c
YP_738275.1	TIGRFAM: Twin-arginine translocation pathway signal; flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: son:SO3624 flavocytochrome c flavin subunit
YP_738276.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: vpa:VP0028 zinc-binding alcohol dehydrogenase
YP_738277.1	KEGG: dar:Daro_0675 PAS:GGDEF; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_738278.1	KEGG: son:SO2557 hypothetical protein
YP_738279.1	KEGG: son:SO2559 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease
YP_738280.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_738281.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2561 transcriptional regulator, LysR family
YP_738282.1	PFAM: Methyltransferase type 11; KEGG: son:SO2562 hypothetical protein
YP_738283.1	PFAM: beta-lactamase domain protein; KEGG: son:SO2563 metallo-beta-lactamase family protein
YP_738284.1	PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: son:SO2564 transglycosylase, Slt family
YP_738285.1	KEGG: son:SO2565 intracellular proteinase inhibitor domain protein
YP_738286.1	PFAM: AsmA family protein; KEGG: son:SO2566 AsmA protein
YP_738287.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_738288.1	KEGG: son:SO2569 hypothetical protein
YP_738289.1	PFAM: protein of unknown function DUF885; KEGG: son:SO2570 lipoprotein, putative
YP_738290.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO2571 ATP-dependent RNA helicase, DEAD box family
YP_738291.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO2572 peptidyl-prolyl cis-trans isomerase B
YP_738292.1	PFAM: protein of unknown function UPF0153; KEGG: son:SO2573 hypothetical protein
YP_738293.1	KEGG: cps:CPS_3516 putative transglycosylase
YP_738294.1	PFAM: protein of unknown function DUF709; KEGG: son:SO2575 hypothetical protein
YP_738295.1	blocks the formation of polar Z-ring septums
YP_738296.1	TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO2577 septum site-determining protein MinD
YP_738297.1	works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell
YP_738298.1	TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: son:SO2580 ribonuclease D
YP_738299.1	Activates fatty acids by binding to coenzyme A
YP_738300.1	PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: son:SO2582 hydrolase, alpha/beta fold family
YP_738301.1	KEGG: son:SO2583 hypothetical protein
YP_738302.1	KEGG: son:SO2584 hypothetical protein
YP_738303.1	KEGG: son:SO2585 hypothetical protein
YP_738304.1	PFAM: peptidase M22, glycoprotease; KEGG: son:SO2586 hypothetical protein
YP_738305.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_738306.1	this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae
YP_738307.1	PFAM: 2OG-Fe(II) oxygenase; KEGG: son:SO2589 isopenicillin-N synthase
YP_738308.1	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)
YP_738309.1	KEGG: pae:PA4801 hypothetical protein
YP_738310.1	KEGG: son:SO3713 hypothetical protein
YP_738311.1	PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: son:SO2208 phosphotyrosine protein phosphatase
YP_738312.1	KEGG: sdn:Sden_0075 hypothetical protein
YP_738313.1	catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_738314.1	PFAM: diacylglycerol kinase; KEGG: son:SO2203 diacylglycerol kinase
YP_738315.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2202 transcriptional regulator, LysR family
YP_738316.1	PFAM: protein of unknown function DUF413; KEGG: son:SO2201 hypothetical protein
YP_738317.1	TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO2200 ribosomal protein S6 modification protein, putative
YP_738318.1	KEGG: son:SO2199 hypothetical protein
YP_738319.1	PFAM: peptidase M28; KEGG: son:SO2198 hypothetical aminopeptidase
YP_738320.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2197 GGDEF family protein
YP_738321.1	TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; KEGG: son:SO2196 LPXTG-site transpeptidase family protein
YP_738322.1	PFAM: von Willebrand factor, type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: son:SO2195 inter-alpha-trypsin inhibitor domain protein
YP_738323.1	PFAM: OmpA/MotB domain protein; KEGG: son:SO2194 OmpA family protein
YP_738324.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2193 DNA-binding response regulator
YP_738325.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2192 sensor histidine kinase
YP_738326.1	catalyzes the formation of L-homocysteine from cystathionine
YP_738327.1	PFAM: CreA family protein; KEGG: son:SO2190 creA protein
YP_738328.1	KEGG: son:SO2189 conserved hypothetical protein
YP_738329.1	PFAM: Polyphosphate kinase; KEGG: vch:VC0723 polyphosphate kinase
YP_738330.1	PFAM: Ppx/GppA phosphatase; KEGG: son:SO2185 exopolyphosphatase
YP_738331.1	PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sdn:Sden_2375 ion transport protein
YP_738332.1	KEGG: son:SO2183 hypothetical protein
YP_738333.1	PFAM: protein of unknown function DUF991; KEGG: son:SO2182 hypothetical protein
YP_738334.1	KEGG: son:SO2181 hypothetical protein
YP_738335.1	PFAM: peptidase M23B; KEGG: son:SO2180 peptidase, M23/M37 family
YP_738336.1	KEGG: son:SO2179 hypothetical protein
YP_738337.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: son:SO2178 cytochrome c551 peroxidase
YP_738338.1	PFAM: 37kDa nucleoid-associated protein; KEGG: son:SO2177 hypothetical protein
YP_738339.2	PFAM: protein of unknown function DUF1414; KEGG: son:SO2176 hypothetical protein
YP_738340.1	PFAM: sulfatase; KEGG: son:SO2175 hypothetical protein
YP_738341.1	PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bxe:Bxe_B0715 NADH-flavin oxidoreductase / NADH oxidase familyprotein
YP_738342.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sde:Sde_2875 transcriptional regulator, LysR family
YP_738343.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO2174 cyclic nucleotide phosphodiesterase, putative
YP_738344.1	two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase
YP_738345.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: eca:ECA2029 nitrate/nitrite sensor kinase
YP_738346.1	TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbo:SBO_1843 nitrite extrusion protein
YP_738347.1	TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: eci:UTI89_C1421 respiratory nitrate reductase 1 alpha chain
YP_738348.1	KEGG: eca:ECA2032 respiratory nitrate reductase 1 beta chain; TIGRFAM: nitrate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein
YP_738349.1	TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase, delta subunit; KEGG: eca:ECA2033 respiratory nitrate reductase 1 delta chain
YP_738350.1	TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase, gamma subunit; KEGG: stt:t1670 respiratory nitrate reductase 1 gamma chain
YP_738352.1	KEGG: son:SO1872 lipoprotein, putative
YP_738353.1	PFAM: Peptidoglycan-binding LysM
YP_738358.1	PFAM: EAL domain protein; KEGG: son:SOA0109 hypothetical protein
YP_738359.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase, HAMP region domain protein; KEGG: sdn:Sden_1435 GGDEF domain
YP_738360.1	KEGG: son:SO2024 hypothetical protein
YP_738361.1	KEGG: son:SO2022 hypothetical protein
YP_738362.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_738363.1	PFAM: PfkB domain protein; KEGG: son:SO2020 inosine-guanosine kinase
YP_738364.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_738365.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_738366.1	PFAM: Thioredoxin domain; KEGG: son:SO2017 putative thioredoxin-like protein
YP_738367.1	molecular chaperone
YP_738368.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_738369.1	PFAM: conserved hypothetical protein 103; KEGG: son:SO2014 conserved hypothetical protein TIGR00103
YP_738370.1	KEGG: son:SO2013 DNA polymerase III, gamma and tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase
YP_738371.1	catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis
YP_738372.1	PFAM: protein of unknown function DUF454; KEGG: son:SO2011 hypothetical protein
YP_738373.1	KEGG: son:SO2010 hypothetical protein
YP_738374.1	KEGG: son:SO2009 hypothetical protein
YP_738375.1	PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: son:SO2008 hypothetical protein
YP_738376.1	KEGG: son:SO2007 hypothetical protein
YP_738377.1	PFAM: dihydrouridine synthase, DuS; KEGG: son:SO2006 NifR3/Smm1 family protein
YP_738378.1	KEGG: son:SO2005 DksA-type zinc finger protein
YP_738379.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2469 putative iron complex outermembrane recepter protein
YP_738380.1	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides
YP_738381.1	PFAM: phospholipase/Carboxylesterase; KEGG: son:SO1999 phospholipase/carboxylesterase family protein
YP_738382.1	KEGG: son:SO1998 hypothetical protein
YP_738383.1	PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1997 peptidase, M1 family
YP_738384.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1995 peptidyl-prolyl cis-trans isomerase, FkbP family
YP_738385.1	TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO1994 membrane-bound lytic transglycolase-related protein
YP_738386.1	KEGG: son:SO1991 hypothetical protein
YP_738387.1	KEGG: son:SO1990 hypothetical protein
YP_738388.1	PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO1989 chemotaxis protein CheV
YP_738389.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1988 hypothetical methyltransferase
YP_738390.1	PFAM: peptidase S16, lon domain protein; KEGG: son:SO1987 ATP-dependent protease La (LON) domain protein
YP_738391.1	PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO1986 RNA polymerase sigma-70 factor, ECF subfamily
YP_738392.1	TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: son:SO1985 transcriptional activator, putative
YP_738393.1	KEGG: sdn:Sden_2145 hypothetical protein
YP_738394.1	KEGG: ilo:IL0185 hypothetical protein
YP_738395.1	KEGG: son:SO1978 hypothetical protein
YP_738396.1	PFAM: protein of unknown function DUF307; KEGG: son:SO1977 hypothetical protein
YP_738397.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO1976 hydrolase, alpha/beta fold family
YP_738398.1	KEGG: son:SO1975 zinc carboxypeptidase-related protein
YP_738399.1	KEGG: son:SO1973 hypothetical ABC transporter protein
YP_738400.1	KEGG: noc:Noc_2152 integral membrane protein TerC
YP_738401.1	activates fatty acids by binding to coenzyme A
YP_738402.1	KEGG: son:SO1970 hypothetical protein
YP_738403.1	PFAM: protein of unknown function DUF55; KEGG: son:SO1969 hypothetical protein
YP_738404.1	KEGG: son:SO1968 hypothetical protein
YP_738405.1	PFAM: protein of unknown function DUF124; KEGG: son:SO1966 conserved hypothetical protein TIGR00266
YP_738406.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1965 transcriptional regulator, LysR family
YP_738407.1	PFAM: homogentisate 1,2-dioxygenase; Cupin 2, conserved barrel domain protein; KEGG: son:SO1963 homogentisate 1,2-dioxygenase
YP_738408.1	KEGG: son:SO1962 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_738409.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; KEGG: dvu:DVU3106 GGDEF domain protein
YP_738410.1	PFAM: transferase hexapeptide repeat containing protein; KEGG: son:SO1961 maltose O-acetyltransferase
YP_738411.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO1954 transporter, LysE family
YP_738412.1	PFAM: protein of unknown function DUF482; KEGG: son:SO1953 hypothetical protein
YP_738413.1	KEGG: son:SO1952 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase
YP_738414.1	KEGG: son:SO3713 hypothetical protein
YP_738415.1	KEGG: cps:CPS_1363 putative dipeptidase; TIGRFAM: dipeptidase, putative; PFAM: peptidase M20
YP_738416.1	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: sdn:Sden_1597 peptidyl-dipeptidase DCP
YP_738417.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO2707 acetyltransferase, GNAT family
YP_738418.1	PFAM: nitroreductase; KEGG: son:SO2708 nitroreductase family protein
YP_738419.1	PFAM: DoxX family protein; KEGG: son:SO2710 hypothetical protein
YP_738420.1	KEGG: son:SO2711 hypothetical protein
YP_738421.1	PFAM: aminoglycoside phosphotransferase; KEGG: son:SO2712 hypothetical protein
YP_738422.1	TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: son:SO2713 transporter, putative
YP_738423.1	KEGG: son:SO2714 hypothetical protein
YP_738424.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2715 TonB-dependent receptor
YP_738425.1	PFAM: protein of unknown function DUF1425; KEGG: son:SO2720 hypothetical protein
YP_738426.1	PFAM: thioesterase superfamily protein; KEGG: son:SO2721 hypothetical protein
YP_738427.1	TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: son:SO2722 hypothetical protein
YP_738428.1	PFAM: histidine triad (HIT) protein; KEGG: son:SO2723 HIT family protein
YP_738429.1	PFAM: peptidase M61 domain protein; KEGG: son:SO2724 protease, putative
YP_738430.1	PFAM: regulatory protein, LuxR; KEGG: son:SO2725 transcriptional regulator, LuxR family
YP_738431.1	PFAM: cytochrome B561; KEGG: son:SO2726 cytochrome b, putative
YP_738432.1	KEGG: son:SO2727 cytochrome c3
YP_738433.1	PFAM: Integrase, catalytic region; KEGG: pol:Bpro_3089 integrase, catalytic region
YP_738434.1	PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_4326 AMP-dependent synthetase and ligase
YP_738435.1	PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO1899 hypothetical protein
YP_738436.1	PFAM: regulatory protein, MerR; KEGG: son:SO1898 transcriptional regulator, putative
YP_738437.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO1897 isovaleryl-CoA dehydrogenase
YP_738438.1	PFAM: carboxyl transferase; KEGG: son:SO1896 3-methylcrotonyl-CoA carboxylase beta subunit
YP_738439.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO1895 enoyl-CoA hydratase
YP_738440.1	PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO1894 3-methylcrotonyl-CoA carboxylase alpha subunit
YP_738441.1	PFAM: pyruvate carboxyltransferase; KEGG: son:SO1893 hydroxymethylglutaryl-CoA lyase
YP_738442.1	KEGG: son:SO1892 acetate CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase
YP_738443.1	KEGG: son:SO1891 3-oxoacid CoA-transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase
YP_738444.1	KEGG: sde:Sde_1831 hypothetical protein
YP_738445.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO1546 hypothetical protein
YP_738446.1	KEGG: cps:CPS_1912 putative lipoprotein
YP_738447.1	PFAM: ThiJ/PfpI domain protein; KEGG: son:SO1887 hypothetical protein
YP_738448.1	KEGG: son:SO1886 hypothetical protein
YP_738449.1	PFAM: protein of unknown function DUF81; KEGG: son:SO1884 membrane protein, putative
YP_738450.1	PFAM: Negative transcriptional regulator; KEGG: sdn:Sden_3742 negative transcriptional regulator
YP_738451.1	PFAM: acriflavin resistance protein; KEGG: son:SO1882 AcrB/AcrD/AcrF family protein
YP_738452.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO1881 HlyD family-related protein
YP_738453.1	PFAM: NlpBDapX family lipoprotein; KEGG: son:SO1880 lipoprotein-34 NlpB
YP_738454.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_738455.1	PFAM: amino acid-binding ACT domain protein; KEGG: son:SO1878 glycine cleavage system transcriptional repressor, putative
YP_738456.1	bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine
YP_738457.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO2865 L-lysine exporter, putative
YP_738458.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_738459.1	PFAM: protein of unknown function UPF0118; KEGG: son:SO2867 permease PerM, putative
YP_738460.1	PFAM: SirA family protein; KEGG: son:SO2868 hypothetical protein
YP_738461.1	PFAM: peptidase M48, Ste24p; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO2869 hypothetical protein
YP_738462.1	TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: son:SO2871 arsenate reductase, putative
YP_738463.1	KEGG: son:SO2872 hypothetical protein
YP_738464.1	KEGG: son:SO2876 hypothetical protein
YP_738465.1	putative metalloprotease
YP_738466.1	alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family
YP_738467.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_738468.1	KEGG: son:SO2735 hypothetical protein
YP_738469.1	KEGG: son:SO2736 hypothetical protein
YP_738470.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_738471.1	TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO2738 biotin synthesis protein BioC
YP_738472.1	PFAM: aminotransferase, class I and II; aminotransferase class-III; KEGG: son:SO2739 8-amino-7-oxononanoate synthase
YP_738473.1	KEGG: son:SO2740 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB
YP_738474.1	TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: son:SO2741 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_738475.1	TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2742 sensor histidine kinase/response regulator
YP_738476.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_738477.1	PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; KEGG: son:SO2744 helicase
YP_738478.1	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase
YP_738479.1	KEGG: pha:PSHAa0696 hypothetical protein
YP_738480.1	KEGG: son:SO2746 hypothetical protein
YP_738481.1	PFAM: OmpA/MotB domain protein; KEGG: son:SO2747 peptidoglycan-associated lipoprotein
YP_738482.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_738483.1	PFAM: TolA family protein; KEGG: son:SO2749 tolA protein
YP_738484.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO2750 tolr protein
YP_738485.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: son:SO2751 MotA/TolQ/ExbB proton channel family protein
YP_738486.1	TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: son:SO2752 conserved hypothetical protein TIGR00051
YP_738487.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO2753 prolyl endopeptidase
YP_738488.1	PFAM: OmpA/MotB domain protein; KEGG: sdn:Sden_1398 OmpA/MotB
YP_738489.1	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A)
YP_738490.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sdn:Sden_2091 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_738491.1	PFAM: Gluconate transporter; Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO2757 membrane protein, putative
YP_738492.1	PFAM: RDD domain containing protein; KEGG: cac:CAC2792 uncharacterized conserved membrane protein, YXAI B.subtilis homolog
YP_738493.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_738494.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_738495.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_738496.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO2762 nagD protein
YP_738497.1	PFAM: peptidase M20; peptidase M28; KEGG: son:SO2766 hypothetical protein
YP_738498.1	functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP
YP_738499.1	PFAM: glycosyl transferase, family 2; KEGG: vpa:VP0192 hypothetical protein
YP_738500.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: xcb:XC_2846 iron receptor
YP_738501.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO2768 acyl-CoA dehydrogenase family protein
YP_738502.1	PFAM: Aldose 1-epimerase; KEGG: son:SO2769 hypothetical protein
YP_738503.1	PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: son:SO2771 2-hydroxy-3-oxopropionate reductase
YP_738504.1	PFAM: thioesterase superfamily protein; KEGG: son:SO2772 cytosolic long-chain acyl-CoA thioester hydrolase family protein
YP_738505.1	KEGG: son:SO2773 hypothetical protein
YP_738506.1	PFAM: beta-ketoacyl synthase; KEGG: son:SO2774 3-oxoacyl-(acyl-carrier-protein) synthase II
YP_738507.1	carries the fatty acid chain in fatty acid biosynthesis
YP_738508.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase; KEGG: son:SO2776 3-oxoacyl-[acyl-carrier protein] reductase
YP_738509.1	TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: son:SO2777 malonyl CoA-acyl carrier protein transacylase
YP_738510.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_738511.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_738512.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_738513.1	PFAM: protein of unknown function DUF177; KEGG: son:SO2781 hypothetical protein
YP_738514.1	TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: son:SO2782 maf protein, putative
YP_738515.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sdn:Sden_2300 HAD-superfamily hydrolase subfamily IA, variant 3
YP_738516.1	KEGG: sdn:Sden_2301 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_738517.1	TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: son:SO2785 ribonuclease E
YP_738518.1	PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sdn:Sden_2303 sulphate transporter
YP_738519.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: son:SO2787 cold shock domain family protein
YP_738520.1	methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth
YP_738521.1	KEGG: son:SO2789 hypothetical protein
YP_738522.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_738523.1	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis
YP_738524.1	PFAM: protein of unknown function DUF1289; KEGG: son:SO2792 hypothetical protein
YP_738525.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO2793 glyoxalase family protein
YP_738526.1	KEGG: son:SO2794 hypothetical protein
YP_738527.1	KEGG: son:SO2795 glyoxalase family protein
YP_738528.1	PFAM: protein of unknown function DUF748; KEGG: son:SO2796 hypothetical protein
YP_738529.1	PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO2797 hypothetical protein
YP_738530.1	KEGG: son:SO2798 hypothetical protein
YP_738531.1	KEGG: son:SO2799 lipoprotein, putative
YP_738532.1	PFAM: protein of unknown function DUF343; KEGG: son:SO2800 hypothetical protein
YP_738533.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_738534.1	KEGG: son:SO2802 ABC transporter, ATP-binding protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_738535.1	TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: son:SO2803 DNA internalization-related competence protein ComEC/Rec2
YP_738536.1	KEGG: son:SO2804 hypothetical protein
YP_738537.1	PFAM: NnrS family protein; KEGG: son:SO2805 putative uncharacterized protein involved in response to NO
YP_738538.1	PFAM: phosphate-starvation-inducible E; KEGG: son:SO2806 hypothetical protein
YP_738539.1	PFAM: type IV pilus assembly PilZ; KEGG: son:SO2807 hypothetical protein
YP_738540.1	KEGG: son:SO2808 hypothetical protein
YP_738541.1	KEGG: son:SO2809 RepA domain protein
YP_738542.1	KEGG: son:SO2821 hypothetical protein
YP_738543.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: son:SO2822 sensor histidine kinase
YP_738544.1	unknown function; when overproduced it confers drug-resistance
YP_738545.1	PFAM: carbon starvation protein CstA; KEGG: son:SO2823.1 hypothetical carbon starvation protein A
YP_738546.1	KEGG: son:SO2827 hypothetical protein
YP_738547.1	KEGG: pha:PSHAa2586 L-sorbosone dehydrogenase (SNDH)
YP_738548.1	KEGG: son:SO2829 hypothetical protein
YP_738549.1	KEGG: son:SO2830 hypothetical protein
YP_738550.1	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate
YP_738551.1	KEGG: son:SO2832 hypothetical protein
YP_738552.1	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions
YP_738553.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_738554.1	KEGG: son:SO2835 hypothetical protein
YP_738555.1	PFAM: Patatin; KEGG: son:SO2836 hypothetical protein
YP_738556.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO2838 ATP-dependent RNA helicase, DEAD box family
YP_738557.1	KEGG: son:SO2839 hypothetical protein
YP_738558.1	PFAM: protein of unknown function DUF45; KEGG: son:SO2840 hypothetical protein
YP_738559.1	KEGG: son:SO2841 hypothetical protein
YP_738560.1	PFAM: peptidase M23B; Opacity-associated protein A; KEGG: son:SO2842 peptidase, M23/M37 family
YP_738561.1	PFAM: SMC domain protein; KEGG: son:SO2843 exonuclease SbcC, putative
YP_738562.1	TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: son:SO2844 exonuclease SbcD, putative
YP_738563.1	PFAM: protein of unknown function DUF81; KEGG: son:SO2846 hypothetical protein
YP_738564.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2847 transcriptional regulator, LysR family
YP_738565.1	PFAM: protein of unknown function DUF1260; KEGG: son:SO1836 hypothetical protein
YP_738566.1	PFAM: RNA-binding S4 domain protein; KEGG: sdn:Sden_2510 RNA-binding S4
YP_738567.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1834 acetyltransferase, GNAT family
YP_738568.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO1832 peptidyl-prolyl cis-trans isomerase C
YP_738569.1	PFAM: protein of unknown function DUF885; KEGG: son:SO1831 hypothetical protein
YP_738570.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1830 GGDEF domain protein
YP_738571.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO1829 TPR domain protein
YP_738572.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: son:SO1828 TonB2 protein
YP_738573.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO1827 TonB system transport protein ExbD2
YP_738574.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: sdn:Sden_2423 MotA/TolQ/ExbB proton channel
YP_738575.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: son:SO1825 MotA/TolQ/ExbB proton channel family protein
YP_738576.1	KEGG: sdn:Sden_2425 hypothetical protein
YP_738577.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sdn:Sden_2427 TonB-dependent receptor, plug
YP_738578.1	PFAM: porin, Gram-negative type; KEGG: son:SO1821 outer membrane porin, putative
YP_738579.1	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C
YP_738580.1	helicase involved in DNA repair and perhaps also replication
YP_738581.1	PFAM: protein of unknown function DUF81; KEGG: son:SO1818 hypothetical protein
YP_738582.1	KEGG: son:SO1817 primosomal replication protein N'', putative
YP_738583.1	KEGG: son:SO1816 hypothetical protein
YP_738584.1	PFAM: histone deacetylase superfamily; KEGG: son:SO1815 histone deacetylase/AcuC/AphA family protein
YP_738585.1	KEGG: son:SO1814 hypothetical protein
YP_738586.1	TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding, class 1; KEGG: son:SO1813 DNA-binding protein, putative
YP_738587.1	KEGG: son:SO1812 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: aminotransferase, class V; Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_738588.1	PFAM: conserved hypothetical protein 1620; KEGG: son:SO1811 hypothetical protein
YP_738589.1	PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: son:SO1810 hypothetical ATPase
YP_738590.1	PFAM: PspC domain protein; KEGG: son:SO1809 phage shock protein C
YP_738591.1	acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding
YP_738592.1	PFAM: PspA/IM30 family protein; KEGG: son:SO1807 phage shock protein A
YP_738593.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO1806 psp operon transcriptional activator
YP_738594.1	PFAM: extracellular solute-binding protein, family 5; KEGG: son:SO1805 peptide ABC transporter, periplasmic peptide-binding protein
YP_738595.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1804 peptide ABC transporter, permease protein
YP_738596.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1803 peptide ABC transporter, permease protein
YP_738597.1	TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; KEGG: son:SO1802 peptide ABC transporter, ATP-binding protein
YP_738598.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1801 peptide ABC transporter, ATP-binding protein
YP_738599.2	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_738600.1	TIGRFAM: Molybdenum-pterin binding; PFAM: TOBE domain protein; KEGG: mma:MM0224 molybdenum-pterin-binding-protein
YP_738601.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO1798 peptidyl-prolyl cis-trans isomerase D
YP_738602.1	PFAM: histone family protein DNA-binding protein; KEGG: son:SO1797 DNA-binding protein, HU family
YP_738603.1	KEGG: son:SO1796 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_738604.1	binds and unfolds substrates as part of the ClpXP protease
YP_738605.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_738606.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_738607.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_738608.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_738609.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO1790 peptidyl-prolyl cis-trans isomerase B
YP_738610.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
YP_738611.1	PFAM: tRNA hydroxylase; KEGG: son:SO1788 tRNA hydroxylase
YP_738612.1	PFAM: protein of unknown function DUF1282; KEGG: son:SO1787 hypothetical protein
YP_738613.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_738614.1	TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: son:SO1784 ferrous iron transport protein B
YP_738615.1	PFAM: FeoA family protein; KEGG: son:SO1783 ferrous iron transport protein A
YP_738616.1	TIGRFAM: cytochrome C family protein; KEGG: son:SO1782 decaheme cytochrome c MtrD
YP_738617.1	KEGG: son:SO1781 outer membrane protein, putative
YP_738618.1	KEGG: son:SO1780 decaheme cytochrome c MtrF
YP_738619.1	KEGG: son:SO1779 decaheme cytochrome c
YP_738620.1	KEGG: son:SO1778 decaheme cytochrome c
YP_738621.1	TIGRFAM: cytochrome C family protein; KEGG: son:SO1777 decaheme cytochrome c MtrA
YP_738622.1	KEGG: son:SO1776 outer membrane protein precursor MtrB
YP_738624.1	KEGG: son:SO1775 phage SPO1 DNA polymerase domain protein
YP_738625.1	PFAM: peptidase M4, thermolysin; Propeptide, PepSY amd peptidase M4; KEGG: pae:PA3724 elastase LasB
YP_738626.1	PFAM: sugar diacid recognition domain protein; KEGG: son:SO1774 hypothetical sugar diacid utilization regulator
YP_738627.1	PFAM: Catalase domain protein; KEGG: son:SO1771.2 hypothetical catalase
YP_738628.1	PFAM: Gluconate transporter; Citrate transporter; KEGG: son:SO1771 permease, GntP family
YP_738629.1	KEGG: son:SO1770 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase
YP_738630.1	PFAM: Pyridoxal-dependent decarboxylase; KEGG: son:SO1769 glutamate decarboxylase, putative
YP_738631.1	KEGG: tcx:Tcr_0663 NAD-dependent DNA ligase (contains BRCT domain type II)-like
YP_738632.1	KEGG: sdn:Sden_0571 hypothetical protein
YP_738635.1	KEGG: son:SO1763 streptogramin A acetyl transferase
YP_738636.1	PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO1762 transcriptional regulator, AraC/XylS family
YP_738637.1	PFAM: AzlC family protein; KEGG: son:SO1760 AzlC family protein
YP_738638.1	PFAM: branched-chain amino acid transport; KEGG: son:SO1759 hypothetical protein
YP_738639.1	PFAM: major facilitator superfamily MFS_1; KEGG: sde:Sde_3038 multiple antibiotic resistance (MarC)-related proteins
YP_738640.1	KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase
YP_738641.1	PFAM: ROK family protein; KEGG: yps:YPTB2439 hypothetical protein
YP_738642.1	PFAM: sugar isomerase (SIS); KEGG: vvy:VVA1515 predicted phosphosugar isomerase
YP_738643.1	PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; KEGG: ecj:JW3101 tagatose 6-phosphate aldolase 1, kbaZ subunit
YP_738644.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: oxidoreductase domain protein; KEGG: son:SO3120 oxidoreductase, Gfo/Idh/MocA family
YP_738645.1	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: ppr:PBPRB0140 putative DeoR-family regulatory protein
YP_738646.1	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: cps:CPS_0238 TonB-dependent receptor
YP_738647.1	PFAM: Helix-turn-helix, type 11 domain protein; KEGG: son:SO1758 hypothetical protein
YP_738648.1	PFAM: transcription activator, effector binding; KEGG: son:SO1757 hypothetical protein
YP_738649.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO1756 glyoxalase family protein
YP_738650.1	PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: son:SO1755 phosphoglucomutase/phosphomannomutase family protein
YP_738651.1	KEGG: son:SO1753 hypothetical protein
YP_738652.1	PFAM: Integral membrane protein TerC; KEGG: son:SO1747 membrane protein, putative
YP_738653.1	KEGG: son:SO1746 hypothetical protein
YP_738654.1	PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO1745 3-beta hydroxysteroid dehydrogenase/isomerase family protein
YP_738655.1	Catalyzes the specific recognition and activation of amino acids during peptide synthesis
YP_738656.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO1743 hydrolase, alpha/beta hydrolase fold family
YP_738657.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_738658.1	KEGG: son:SO1741 hypothetical protein
YP_738659.1	PFAM: protein of unknown function DUF1289; KEGG: son:SO1739 hypothetical protein
YP_738660.1	PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: son:SO1738 hypothetical protein
YP_738661.1	TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: sdn:Sden_1362 choline/carnitine/betaine transport
YP_738662.1	KEGG: son:SO1736 hypothetical protein
YP_738663.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO1734 glyoxalase family protein
YP_738664.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO0115 hypothetical protein
YP_738666.1	regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon
YP_738667.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_738668.1	TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1724 phosphate ABC transporter, permease protein, putative
YP_738669.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1723 phosphate ABC transporter, permease protein, putative
YP_738670.1	PFAM: amino acid-binding ACT domain protein; KEGG: son:SO1722 ACT domain protein
YP_738671.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: sdn:Sden_1682 protein of unknown function DUF6, transmembrane
YP_738672.1	PFAM: putative esterase; KEGG: ilo:IL2526 predicted hydrolase of the alpha/beta superfamily
YP_738673.1	KEGG: son:SO1718 hypothetical protein
YP_738674.1	KEGG: bbr:BB1298 hypothetical protein
YP_738675.1	KEGG: son:SO1717 hypothetical protein
YP_738676.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO1716 transporter, LysE family
YP_738677.1	PFAM: protein of unknown function DUF1415; KEGG: son:SO1715 hypothetical protein
YP_738678.1	KEGG: son:SO1710 hypothetical protein
YP_738679.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: sdn:Sden_3290 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_738681.1	PFAM: acetyl-CoA hydrolase/transferase; KEGG: son:SO1708 4-hydroxybutyrate coenzyme A transferase
YP_738682.1	PFAM: ABC-2 type transporter; KEGG: son:SO1707 ABC transporter, permease protein, putative
YP_738683.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvu:VV20598 ABC-type multidrug transport system, ATPase component
YP_738684.1	PFAM: secretion protein HlyD family protein; KEGG: son:SO1705 putative HlyD family secretion protein
YP_738685.1	PFAM: regulatory protein, TetR; KEGG: ppr:PBPRA0420 putative transcriptional regulator
YP_738686.1	KEGG: son:SO1702 hypothetical protein
YP_738687.1	KEGG: son:SO1701 hypothetical protein
YP_738688.1	KEGG: son:SO1700 hypothetical protein
YP_738689.1	PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO1699 transcriptional regulator
YP_738690.1	KEGG: son:SO1698 hypothetical protein
YP_738691.1	KEGG: son:SO1695 sensory box/GGDEF family protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: PAS domain containing protein
YP_738692.1	PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: son:SO1694 FAD-binding protein
YP_738693.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1692 hypothetical protein
YP_738694.1	PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: son:SO1691 lipoprotein Blc
YP_738695.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1690 ABC transporter, ATP-binding protein
YP_738696.1	TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: son:SO1689 cation transport ATPase, E1-E2 family
YP_738697.1	PFAM: regulatory protein, MerR; KEGG: son:SO1687 transcriptional regulator, MerR family
YP_738698.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: son:SO1686 prolyl oligopeptidase family protein
YP_738699.1	KEGG: son:SO1685 hypothetical protein
YP_738700.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_738701.1	KEGG: son:SO1682 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding
YP_738702.1	PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO1681 enoyl-CoA hydratase/isomerase family protein
YP_738703.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_738704.1	PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal; KEGG: son:SO1679 acyl-CoA dehydrogenase family protein
YP_738705.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: son:SO1678 methylmalonate-semialdehyde dehydrogenase
YP_738706.1	KEGG: son:SO1677 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase
YP_738707.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_738708.1	KEGG: son:SO1675 hypothetical protein
YP_738709.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO1674 short chain dehydrogenase family protein
YP_738710.1	receptor for colicin S4
YP_738711.1	PFAM: protein of unknown function DUF925; KEGG: son:SO1672 hypothetical protein
YP_738712.1	TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO1671 glutathione S-transferase family protein
YP_738713.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: son:SO1670 fumarylacetoacetate hydrolase family protein
YP_738714.1	PFAM: sigma-54 factor, interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; KEGG: son:SO1669 transcriptional regulatory protein TyrR
YP_738715.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_738716.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_738717.1	KEGG: son:SO1665 UTP--glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase
YP_738718.1	TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO1664 UDP-glucose 4-epimerase
YP_738719.1	TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1663 ferredoxin-type protein NapF
YP_738720.1	PFAM: protein of unknown function DUF583; KEGG: son:SO1662 hypothetical Ccm2-related protein
YP_738721.1	PFAM: regulatory protein, LysR; KEGG: son:SO1661 transcriptional regulator, LysR family
YP_738722.1	KEGG: son:SO1659 decaheme cytochrome c
YP_738723.1	KEGG: son:SO1658 hypothetical protein
YP_738724.1	PFAM: protein of unknown function DUF218; KEGG: son:SO1657 hypothetical protein
YP_738725.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_738726.1	TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: son:SO1655 cysQ protein
YP_738727.1	KEGG: son:SO1653 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal
YP_738728.1	PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: son:SO1652 putative histidinol phosphatase
YP_738729.1	PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART: DEAD/DEAH box helicase domain protein; KEGG: son:SO1651 Snf2 family protein
YP_738730.1	PFAM: protein of unknown function DUF885; KEGG: cps:CPS_4234 hypothetical protein
YP_738731.1	PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: son:SO1648 cold shock domain family protein
YP_738732.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: son:SO1647 glutathione-regulated potassium-efflux system protein KefB, putative
YP_738733.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1646 GGDEF family protein
YP_738734.1	TIGRFAM: tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase-like; PFAM: PP-loop domain protein; KEGG: son:SO1645 cell cycle protein MesJ
YP_738735.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_738736.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_738737.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_738738.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_738739.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_738740.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_738741.1	PFAM: outer membrane chaperone Skp (OmpH); KEGG: son:SO1638 outer membrane protein OmpH
YP_738742.1	PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: son:SO1637 bacterial surface antigen
YP_738743.1	TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: son:SO1636 membrane-associated zinc metalloprotease, putative
YP_738744.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_738745.1	PFAM: phosphatidate cytidylyltransferase; KEGG: son:SO1634 phosphatidate cytidylyltransferase
YP_738746.1	KEGG: son:SO1633 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase
YP_738747.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_738748.1	Catalyzes the phosphorylation of UMP to UDP
YP_738749.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_738750.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_738751.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_738752.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_738753.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_738754.1	KEGG: sdn:Sden_1550 hypothetical protein
YP_738755.1	PFAM: CBS domain containing protein; GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: mag:amb0553 response regulator
YP_738756.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_738757.1	TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: son:SO1623 PTS system, glucose-specific IIBC component
YP_738758.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_738759.1	PFAM: pseudouridine synthase; KEGG: sdn:Sden_1546 pseudouridylate synthase
YP_738760.1	PFAM: protein of unknown function DUF446; KEGG: son:SO1619 hypothetical protein
YP_738761.1	KEGG: son:SO1618 hypothetical protein
YP_738762.1	KEGG: son:SO1617 hypothetical protein
YP_738763.1	KEGG: son:SO1615 hypothetical protein
YP_738764.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1614 acetyltransferase, GNAT family
YP_738765.1	KEGG: son:SO1613 hypothetical protein
YP_738766.1	KEGG: son:SO1612 hypothetical protein
YP_738767.1	KEGG: son:SO1611 hypothetical protein
YP_738768.1	KEGG: son:SO1610 hypothetical protein
YP_738769.1	putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function
YP_738770.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_738771.1	PFAM: SpoOM family protein; KEGG: pha:PSHAa0857 SpoOM-related protein
YP_738772.1	KEGG: son:SO1605 lipoprotein, putative
YP_738773.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: son:SO1604 4'-phosphopantetheinyl transferase family protein
YP_738774.1	KEGG: son:SO1603 transcriptional regulator, putative
YP_738775.1	PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: son:SO1602 multi-domain beta-ketoacyl synthase
YP_738776.1	KEGG: ppr:PBPRA1459 omega-3 polyunsaturated fatty acid synthase PfaB
YP_738777.1	PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: son:SO1599 multi-domain beta-ketoacyl synthase
YP_738778.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: son:SO1597 hypothetical protein
YP_738779.1	KEGG: nme:NMB0492 hypothetical protein
YP_738780.1	SMART: helix-turn-helix domain protein; KEGG: ilo:IL0056 membrane associated protein containing xre-family DNA-binding HTH domain
YP_738781.1	PFAM: protein of unknown function DUF1328; KEGG: sdn:Sden_3712 protein of unknown function DUF1328
YP_738782.1	KEGG: sdn:Sden_3711 hypothetical protein
YP_738783.1	PFAM: Dual specificity protein phosphatase; diacylglycerol kinase, catalytic region; SMART: protein tyrosine phosphatase, catalytic region; KEGG: sdn:Sden_3710 diacylglycerol kinase, catalytic region
YP_738784.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: sdn:Sden_3709 sigma-54 factor, interaction region
YP_738785.1	KEGG: sdn:Sden_3708 hypothetical protein
YP_738786.1	PFAM: transport-associated; KEGG: sdn:Sden_3707 transport-associated
YP_738787.1	KEGG: son:SO1590 hypothetical protein
YP_738788.1	KEGG: son:SO1589 hypothetical protein
YP_738789.1	PFAM: Phosphoglycerate mutase; KEGG: vvy:VVA1671 fructose-2;6-bisphosphatase
YP_738791.1	PFAM: porin, Gram-negative type; KEGG: son:SO3896 outer membrane porin, putative
YP_738792.1	PFAM: major facilitator superfamily MFS_1; KEGG: vpa:VPA0824 putative regulatory protein UhpC
YP_738793.1	KEGG: vpa:VPA0825 putative phosphoglycerate transport regulatory protein PgtC
YP_738794.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ppr:PBPRA2770 hypothetical phosphoglycerate transport regulatory protein PgtB
YP_738795.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; KEGG: ppr:PBPRA2771 phosphoglycerate transport system transcription regulator
YP_738796.1	KEGG: son:SO1588 hypothetical protein
YP_738797.1	KEGG: son:SO1587 hypothetical protein
YP_738798.1	PFAM: cyclic nucleotide-binding; KEGG: son:SO1586 hypothetical cyclic nucleotide-binding domain protein
YP_738799.1	PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: son:SO1585 fumarylacetoacetate hydrolase family protein
YP_738800.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO1583 hypothetical protein
YP_738801.1	PFAM: regulatory protein, MarR; KEGG: son:SO1582 transcriptional regulator, MarR family
YP_738802.1	PFAM: PhnA protein; KEGG: son:SO1581 PhnA protein
YP_738803.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO1579 hypothetical protein
YP_738804.1	PFAM: regulatory protein, TetR; KEGG: son:SO1578 transcriptional regulator, TetR family
YP_738805.1	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO1577 glutathione S-transferase family protein
YP_738806.1	PFAM: Glutathione S-transferase, N-terminal domain protein; Glutathione S-transferase, C-terminal domain protein; KEGG: son:SO1576 glutathione S-transferase family protein
YP_738807.1	PFAM: Fmu (Sun) domain protein; KEGG: son:SO1575 NOL1/NOP2/sun family putative RNA methylase
YP_738808.1	KEGG: son:SO1572 hypothetical protein
YP_738809.1	KEGG: son:SO1571 hypothetical protein
YP_738810.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; KEGG: son:SO1570 GGDEF domain protein
YP_738811.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1569 integral membrane domain protein
YP_738812.1	PFAM: YfaZ family protein; KEGG: son:SO1568 hypothetical protein
YP_738813.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1566 acetyltransferase, GNAT family
YP_738814.1	PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: son:SO1565 magnesium transporter, putative
YP_738815.1	PFAM: glutathione peroxidase; KEGG: son:SO1563 glutathione peroxidase
YP_738816.1	PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1561 peptidase, M1 family
YP_738817.1	TIGRFAM: phosphate binding protein; KEGG: son:SO1560 phosphate-binding protein
YP_738818.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: son:SO1559 phosphate regulon sensor protein PhoR
YP_738819.1	TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO1558 phosphate regulon response regulator PhoB
YP_738820.1	PFAM: porin, Gram-negative type; KEGG: son:SO1557 outer membrane porin, putative
YP_738821.1	Required for efficient pilin antigenic variation
YP_738822.1	PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: sdn:Sden_2554 peptidase M61
YP_738823.1	PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO1552 TPR domain protein
YP_738824.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1551 GGDEF domain protein
YP_738825.1	PFAM: conserved hypothetical protein 730; KEGG: son:SO1550 hypothetical protein
YP_738826.1	has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups
YP_738827.1	KEGG: son:SO1548 hypothetical protein
YP_738828.1	KEGG: ade:Adeh_2097 hypothetical protein
YP_738829.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: dsy:DSY3663 putative fumarate reductase flavoprotein subunit
YP_738830.1	PFAM: outer membrane porin; KEGG: tdn:Tmden_1456 hypothetical protein
YP_738831.1	PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: pca:Pcar_2500 transcriptional regulator-like
YP_738832.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: son:SO1539 hypothetical protein
YP_738833.1	catalyzes the formation of 2-oxoglutarate from isocitrate
YP_738834.1	KEGG: son:SO1536 hypothetical protein
YP_738835.1	PFAM: protein of unknown function DUF423; KEGG: son:SO1535 hypothetical protein
YP_738836.1	KEGG: son:SO1534 hypothetical protein
YP_738837.1	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence
YP_738838.1	KEGG: son:SO1532 hypothetical protein
YP_738839.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_738840.1	KEGG: dde:Dde_2987 transposase
YP_738841.1	Required for the synthesis of the thiazole moiety
YP_738842.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_738843.1	Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.
YP_738844.1	TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: sdn:Sden_2569 exodeoxyribonuclease VII, small subunit
YP_738845.1	PFAM: Polyprenyl synthetase; KEGG: son:SO1526 geranyltranstransferase
YP_738846.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_738847.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_738848.1	catalyzes the phosphorylation of NAD to NADP
YP_738849.1	PFAM: L-lactate permease; KEGG: son:SO1522 L-lactate permease, putative
YP_738850.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: son:SO1521 iron-sulfur cluster-binding protein
YP_738851.1	PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: son:SO1520 hypothetical protein
YP_738852.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1519 iron-sulfur cluster-binding protein
YP_738853.1	PFAM: protein of unknown function DUF162; KEGG: son:SO1518 hypothetical protein
YP_738854.1	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: cne:CNC04110 AAA family ATPase
YP_738855.1	KEGG: son:SO1508.1 hypothetical protein
YP_738856.1	PFAM: protein of unknown function DUF1568; KEGG: son:SO3447 hypothetical protein
YP_738857.1	PFAM: protein of unknown function DUF162; KEGG: son:SO1518 hypothetical protein
YP_738858.1	PFAM: protein of unknown function DUF1428; KEGG: sdn:Sden_1972 protein of unknown function DUF1428
YP_738860.1	PFAM: protein of unknown function UPF0118; KEGG: mca:MCA0120 hypothetical protein
YP_738861.1	TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A1740 RND efflux system, outer membrane lipoprotein, NodT
YP_738862.1	PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_1711 secretion protein HlyD
YP_738863.1	KEGG: pfo:Pfl_2137 hypothetical protein
YP_738864.1	PFAM: Ion transport 2 domain protein; KEGG: rme:Rmet_1713 ion transport 2
YP_738865.1	KEGG: son:SO1507 hypothetical protein
YP_738866.1	PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO1506 MATE efflux family protein
YP_738867.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO1505 transporter, putative
YP_738868.1	KEGG: son:SO1504 hypothetical protein
YP_738869.1	SMART: extracellular solute-binding protein, family 3; KEGG: son:SO1503 ABC transporter, periplasmic substrate-binding protein, putative
YP_738870.1	PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: son:SO1502 cobalamin synthesis protein/P47K family protein
YP_738871.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO1501 ATP-dependent RNA helicase, DEAD box family
YP_738872.1	KEGG: son:SO1500 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_738873.1	PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: son:SO1499 glycogen synthase
YP_738874.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_738875.1	KEGG: son:SO1496 glycogen phosphorylase family protein; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35
YP_738876.1	KEGG: son:SO1495 glycogen operon protein; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain
YP_738877.1	catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain
YP_738878.1	KEGG: son:SO1493 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77
YP_738879.1	PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO1492 peptidyl-prolyl cis-trans isomerase, cyclophilin family
YP_738880.1	PFAM: regulatory protein, MarR; KEGG: sdn:Sden_0718 regulatory protein, MarR
YP_738881.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO1490 alcohol dehydrogenase II
YP_738882.1	KEGG: son:SO1489 hypothetical protein
YP_738883.1	KEGG: son:SO1487 hypothetical protein
YP_738884.1	PFAM: thioesterase superfamily protein; KEGG: son:SO1486 cytosolic long-chain acyl-CoA thioester hydrolase family protein
YP_738885.1	TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: son:SO1484 isocitrate lyase
YP_738886.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_738887.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1482 TonB-dependent receptor, putative
YP_738888.1	TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: son:SO1481 glutathione-regulated potassium-efflux system protein
YP_738889.1	KEGG: son:SO1480 GGDEF family protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: Tetratricopeptide domain protein
YP_738890.1	KEGG: son:SO1479 hypothetical protein
YP_738891.1	PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: son:SO1478 methylase, putative
YP_738892.1	PFAM: SmpA/OmlA domain protein; KEGG: son:SO1476 small protein A
YP_738893.1	PFAM: protein of unknown function UPF0125; KEGG: son:SO1475 hypothetical protein
YP_738894.1	PFAM: cyclase/dehydrase; KEGG: son:SO1474 hypothetical protein
YP_738895.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_738896.1	PFAM: phage integrase family protein; KEGG: son:SO1471 site-specific recombinase, phage integrase family
YP_738898.1	PFAM: Prophage CP4-57 regulatory; KEGG: sde:Sde_2745 putative transcriptional regulator
YP_738899.1	KEGG: son:SO0390.1 hypothetical protein
YP_738900.1	KEGG: ppr:PBPRA1708 hypothetical protein
YP_738901.1	KEGG: ecc:c5382 hypothetical protein
YP_738902.1	PFAM: Abi family protein; KEGG: noc:Noc_1806 abortive infection bacteriophage resistance protein
YP_738903.1	PFAM: restriction modification system DNA specificity domain; KEGG: ecs:ECs5306 type I restriction-modification enzyme S subunit
YP_738904.1	PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: vvu:VV12031 type I restriction enzyme EcoEI M protein
YP_738905.1	KEGG: vpa:VP0389 hypothetical protein
YP_738906.1	KEGG: vfi:VFA0532 hypothetical protein
YP_738907.1	KEGG: vpa:VP0392 hypothetical protein
YP_738908.1	PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; EcoEI R, C-terminal domain protein; KEGG: vvu:VV12037 type I restriction enzyme EcoEI R protein
YP_738909.1	KEGG: rba:RB62 hypothetical protein
YP_738910.1	KEGG: son:SO1425 hypothetical protein
YP_738911.1	KEGG: son:SO1424 hypothetical protein
YP_738912.1	PFAM: Heavy metal transport/detoxification protein; KEGG: son:SO1407 mercuric transport periplasmic protein MerP, putative
YP_738913.1	KEGG: son:SO1406 mercuric transport protein MerT, putative
YP_738914.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: transglutaminase domain protein; KEGG: son:SO1405 transglutaminase family protein
YP_738915.1	KEGG: vpa:VP2175 putative HAAAP family transport protein
YP_738916.1	TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO1404 endoribonuclease L-PSP, putative
YP_738917.1	PFAM: protein of unknown function DUF1063; KEGG: son:SO1403 hypothetical protein
YP_738918.1	PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein
YP_738919.1	KEGG: son:SO1401 hypothetical protein
YP_738920.1	PFAM: protein of unknown function DUF368; KEGG: son:SO1400 hypothetical protein
YP_738921.1	KEGG: sdn:Sden_2841 hypothetical protein
YP_738922.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: son:SO1397 cytosine deaminase
YP_738923.1	PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: son:SO1396 hypothetical protein
YP_738924.1	PFAM: protein of unknown function DUF1294; KEGG: son:SO1395 membrane protein,putative
YP_738925.1	PFAM: regulatory protein, TetR; KEGG: son:SO1393 transcriptional regulator, TetR family
YP_738926.1	PFAM: HPP family protein; KEGG: son:SO1392 hypothetical protein
YP_738927.1	PFAM: short chain fatty acid transporter; KEGG: son:SO1391 short-chain fatty acids transporter
YP_738928.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1390 peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_738929.1	KEGG: sdn:Sden_2136 chitinase; PFAM: PKD domain containing protein; glycoside hydrolase, family 18; Carbohydrate-binding family V/XII; Chitinase A N-terminal domain protein; SMART: chitinase II
YP_738930.1	PFAM: ROK family protein; KEGG: son:SO1389 ROK family protein
YP_738931.1	PFAM: peptidase M24; KEGG: son:SO1388 aminopeptidase P, putative
YP_738932.1	KEGG: son:SO1385 methyl-accepting chemotaxis protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_738933.1	PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; KEGG: son:SO1383 ATP-dependent RNA helicase, DEAD box family
YP_738934.1	KEGG: son:SO1382 hypothetical protein
YP_738935.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO1381 hypothetical protein
YP_738936.1	KEGG: son:SO1380 hypothetical protein
YP_738937.1	KEGG: sdn:Sden_0883 hypothetical protein
YP_738938.1	KEGG: son:SO1379 hypothetical protein
YP_738939.1	TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: son:SO1378 ThiJ/PfpI family protein
YP_738940.1	PFAM: band 7 protein; KEGG: son:SO1377 hypothetical protein
YP_738941.1	PFAM: protein of unknown function DUF1449; KEGG: son:SO1376 hypothetical protein
YP_738942.1	KEGG: eli:ELI_10435 hypothetical protein
YP_738943.1	PFAM: peptidase M32, carboxypeptidase Taq metallopeptidase; KEGG: son:SO1375 carboxypeptidase
YP_738944.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1374 acetyltransferase, GNAT family
YP_738945.1	PFAM: protein of unknown function DUF486; KEGG: son:SO1373 hypothetical protein
YP_738946.1	KEGG: son:SO1372 hypothetical protein
YP_738947.1	PFAM: RDD domain containing protein; KEGG: son:SO1371 hypothetical protein
YP_738948.1	PFAM: permease YjgP/YjgQ family protein; KEGG: son:SO1370 hypothetical protein
YP_738949.1	PFAM: permease YjgP/YjgQ family protein; KEGG: son:SO1369 hypothetical protein
YP_738950.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_738951.1	TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; KEGG: son:SO1367 prephenate dehydratase / chorismate mutase / phospho-2-dehydro-3-deoxyheptonate aldolase
YP_738952.1	PFAM: sodium/hydrogen exchanger; KEGG: son:SO1366 sodium/hydrogen exchanger family protein
YP_738953.1	KEGG: son:SO1365 hypothetical protein
YP_738954.1	PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: son:SO1364 iron-sulfur cluster-binding protein
YP_738955.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_738956.1	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis
YP_738957.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_738958.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_738959.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_738960.1	Essential for efficient processing of 16S rRNA
YP_738961.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_738962.1	with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins
YP_738963.1	PFAM: cytochrome c assembly protein; KEGG: son:SO1355 hypothetical protein
YP_738964.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: son:SO1354 hemolysin protein, putative
YP_738966.1	PFAM: protein of unknown function DUF962; KEGG: son:SO1353 hypothetical protein
YP_738967.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_738968.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_738969.1	TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: son:SO1350 DNA repair protein RecO
YP_738970.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_738971.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_738972.1	KEGG: son:SO1347 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B
YP_738973.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_738974.1	PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: son:SO1345 sigma-E factor regulatory protein RseC
YP_738975.1	PFAM: MucB/RseB family protein; KEGG: son:SO1344 sigma-E factor regulatory protein RseB
YP_738976.1	PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: son:SO1343 sigma-E factor negative regulatory protein
YP_738977.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_738978.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_738979.1	KEGG: son:SO1340 hypothetical protein
YP_738980.1	PFAM: protein of unknown function DUF339; KEGG: son:SO1339 hypothetical protein
YP_738981.1	Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC
YP_738982.1	KEGG: son:SO1337 hypothetical protein
YP_738983.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
YP_738984.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_738985.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_738986.1	PFAM: protein of unknown function DUF81; KEGG: son:SO1333 hypothetical protein
YP_738987.1	TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: son:SO1332 phosphoenolpyruvate-protein phosphotransferase PtsP
YP_738988.1	hydrolyzes diadenosine polyphosphate
YP_738989.1	MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair
YP_738990.1	KEGG: son:SO1329 adenylate cyclase-related protein
YP_738991.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1328 transcriptional regulator, LysR family
YP_738992.1	PFAM: Hpt domain protein; KEGG: son:SO1327 sensor histidine kinase-related protein
YP_738993.1	KEGG: son:SO1326 hypothetical protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB
YP_738995.1	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate
YP_738996.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_738997.1	PFAM: purine and other phosphorylases, family 1; KEGG: son:SO1322 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase
YP_738998.1	PFAM: cobalamin biosynthesis protein CbiB; KEGG: son:SO1321 CobD-related protein
YP_738999.1	KEGG: son:SO1320 hypothetical protein
YP_739000.1	PFAM: protein of unknown function UPF0126; KEGG: son:SO1319 hypothetical protein
YP_739001.1	KEGG: son:SO1318 hypothetical protein
YP_739002.1	KEGG: son:SO1317 hypothetical protein
YP_739003.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_739004.1	PFAM: peptidase M23B; Opacity-associated protein A, N-terminal domain protein; KEGG: son:SO1314 peptidase, M23/M37 family
YP_739005.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_739006.1	PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: son:SO1312 TolB domain protein
YP_739007.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: son:SO1310 hypothetical protein
YP_739008.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1309 hypothetical TonB-dependent receptor
YP_739009.1	porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure
YP_739010.1	KEGG: son:SO1306 hypothetical protein
YP_739011.1	KEGG: son:SO1305 hypothetical protein
YP_739012.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_739013.1	KEGG: son:SO1303 hypothetical protein
YP_739014.1	PFAM: Cl- channel, voltage-gated family protein; KEGG: son:SO1302 chloride channel
YP_739015.1	Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate
YP_739016.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_739017.1	PFAM: Citrate transporter; KEGG: sdn:Sden_2820 citrate transporter
YP_739018.1	KEGG: son:SO1298 general secretion pathway protein B
YP_739019.1	PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: son:SO1297 general secretion pathway protein A
YP_739020.1	PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: sdn:Sden_2823 polynucleotide adenylyltransferase region
YP_739021.1	KEGG: son:SO1295 major outer membrane lipoprotein, putative
YP_739022.1	KEGG: son:SO1294 ribosomal RNA large subunit methyltransferase A, putative
YP_739023.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_739024.1	TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: son:SO1292 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_739025.1	TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: son:SO1291 dihydroneopterin aldolase
YP_739026.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_739027.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_739028.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_739029.1	PFAM: GatB/Yqey domain protein; KEGG: son:SO1287 hypothetical protein
YP_739030.1	KEGG: son:SO1286 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase DnaG, DnaB-binding; DNA primase catalytic core, N-terminal domain protein; SMART: Toprim sub domain protein
YP_739031.1	TIGRFAM: RNA polymerase sigma factor RpoD; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70, non-essential domain protein; sigma-70 region 1.2; KEGG: son:SO1284 RNA polymerase sigma-70 factor
YP_739032.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO1278 methyl-accepting chemotaxis protein
YP_739033.1	TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: son:SO1277 proton-dependent oligopeptide transporter (POT) family protein
YP_739034.1	PFAM: luciferase family protein; KEGG: pha:PSHAb0540 putative alkanal monooxygenase (FMN-linked)
YP_739035.1	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
YP_739036.1	KEGG: son:SO1275 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase
YP_739037.1	PFAM: FAD dependent oxidoreductase; KEGG: son:SO1274 probable oxidoreductase
YP_739038.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1273 polyamine ABC transporter, permease protein
YP_739039.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1272 polyamine ABC transporter, permease protein
YP_739040.1	KEGG: son:SO1271 polyamine ABC transporter, ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase
YP_739041.1	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein
YP_739042.1	PFAM: glutamine synthetase, catalytic region; KEGG: son:SO1268 glutamine synthetase
YP_739043.1	PFAM: peptidase C26; KEGG: son:SO1267 hypothetical glutamine amidotransferase
YP_739044.1	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: son:SO1265 transcriptional regulator, putative
YP_739045.1	PFAM: FAD dependent oxidoreductase; KEGG: son:SO1264 hypothetical oxidoreductase
YP_739046.1	KEGG: son:SO1262 hypothetical protein
YP_739047.1	PFAM: Rhodanese domain protein; KEGG: son:SO1261 mercaptopyruvate sulfurtransferase
YP_739048.1	TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: ilo:IL1764 lipoprotein A family protein
YP_739049.1	PFAM: aldehyde dehydrogenase; KEGG: son:SO3496 aldehyde dehydrogenase
YP_739050.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_739051.1	TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: hch:HCH_01157 methylmalonate-semialdehyde dehydrogenase
YP_739052.1	PFAM: protein of unknown function DUF861, cupin_3; KEGG: son:SO3501 hypothetical protein
YP_739053.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO3502 hypothetical protein
YP_739054.1	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3503 glucose/galactose transporter
YP_739055.1	KEGG: son:SO3504 hypothetical protein
YP_739056.1	KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase
YP_739057.1	PFAM: sugar isomerase (SIS); KEGG: son:SO3506 glucosamine-6-phosphate isomerase
YP_739058.1	PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: son:SO3507 hypothetical protein
YP_739059.1	PFAM: glycoside hydrolase, family 20; Carbohydrate-binding, chitobiase/hexosaminidase-type domain protein; glycoside hydrolase, family 20 domain protein; KEGG: son:SO3509 beta-hexosaminidase b precursor
YP_739060.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: sde:Sde_0391 putative methyl-accepting chemotaxis sensory transducer
YP_739061.1	KEGG: sde:Sde_2658 type IV pilus assembly protein PilM
YP_739062.1	PFAM: protein of unknown function DUF81; KEGG: cps:CPS_1011 hypothetical protein
YP_739063.1	PFAM: SapC family protein; KEGG: son:SO3512 hypothetical protein
YP_739064.1	PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: son:SO3513 tryptophan halogenase, putative
YP_739065.1	TIGRFAM: TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO3514 hypothetical TonB-dependent receptor
YP_739066.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: son:SO3516 transcriptional regulator, LacI family
YP_739067.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO3517 NADH dehydrogenase
YP_739068.1	PFAM: nitrogen regulatory protein P-II; KEGG: son:SO3519 nitrogen regulatory protein P-II 1
YP_739069.1	PFAM: methylation site containing protein; KEGG: son:SO3520 type IV pilus biogenesis protein, putative
YP_739070.1	PFAM: methylation site containing protein; KEGG: son:SO3521 type IV pilus biogenesis protein, putative
YP_739071.1	KEGG: son:SO3523 hypothetical protein
YP_739072.1	PFAM: methylation site containing protein; KEGG: son:SO3524 type IV pilus biogenesis protein PilE
YP_739073.1	KEGG: son:SO3525 type IV pilin biogenesis protein, putative
YP_739074.1	KEGG: son:SO3526 type IV pilus assembly protein PilX
YP_739075.1	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: son:SO3527 type IV pilus assembly protein PilW
YP_739076.1	TIGRFAM: Prepilin-type cleavage/methylation-like; type IV pilus modification protein PilV; KEGG: son:SO3528 type IV pilus assembly protein PilV
YP_739077.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_739078.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO3530 peptidyl-prolyl cis-trans isomerase FkbP
YP_739079.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_739080.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_739081.1	KEGG: son:SO3533 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase
YP_739082.1	TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: son:SO3534 MviN protein
YP_739083.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_739084.1	PFAM: regulatory protein, ArsR; KEGG: son:SO3538 transcriptional regulator HlyU
YP_739085.1	PFAM: peptidase M20; peptidase M28; KEGG: son:SO3539 peptidase, M28D family
YP_739086.1	PFAM: protein of unknown function DUF328; KEGG: son:SO3540 hypothetical protein
YP_739087.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO3541 sodium:alanine symporter family protein
YP_739088.1	PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: son:SO3542 putative phosphoketolase
YP_739089.1	PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: son:SO3545 OmpA family protein
YP_739090.1	KEGG: son:SO3546 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase
YP_739091.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_739092.1	KEGG: son:SO3548 hypothetical protein
YP_739093.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: son:SO3549 hypothetical protein
YP_739094.1	KEGG: son:SO3550 hypothetical protein
YP_739095.1	PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO3551 RNA polymerase sigma-70 factor, ECF subfamily
YP_739096.1	PFAM: von Willebrand factor, type A; KEGG: son:SO3552 von Willebrand factor type A domain protein
YP_739097.1	putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport
YP_739098.1	KEGG: son:SO3554 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
YP_739099.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_739100.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: son:SO3556 cyclic nucleotide phosphodiesterase, putative
YP_739101.1	KEGG: son:SO3557 hypothetical protein
YP_739102.1	KEGG: son:SO3558 hypothetical protein
YP_739103.1	involved in the first step of glutathione biosynthesis
YP_739104.1	PFAM: peptidase M16 domain protein; KEGG: son:SO3560 peptidase, M16 family
YP_739105.1	KEGG: son:SO3561 hypothetical protein
YP_739106.1	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO3562 proton/glutamate symporter, putative
YP_739107.1	KEGG: pha:PSHAa2250 hypothetical protein
YP_739108.1	KEGG: vpa:VP2543 oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit
YP_739109.1	catalyzes the formation of pyruvate from oxaloacetate
YP_739110.1	TIGRFAM: sodium pump decarboxylases, gamma subunit; PFAM: sodium pump decarboxylase, gamma subunit; KEGG: vvy:VV2800 oxaloacetate decarboxylase, gamma subunit
YP_739111.1	KEGG: son:SO3575 CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_739112.1	KEGG: son:SO3576 hypothetical protein
YP_739113.1	PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: son:SO3577 clpB protein
YP_739114.1	PFAM: protein of unknown function DUF152; KEGG: son:SO3578 conserved hypothetical protein TIGR00726
YP_739115.1	KEGG: sdn:Sden_2863 pseudouridine synthase, RluD; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase
YP_739116.1	KEGG: son:SO3580 putative lipoprotein
YP_739117.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3582 methyl-accepting chemotaxis protein
YP_739118.1	PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: hch:HCH_01369 flavodoxin reductases (ferredoxin-NADPH reductases) family 1
YP_739119.1	TIGRFAM: Pseudouridine synthase, Rsu; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sdn:Sden_2876 pseudouridine synthase, Rsu
YP_739120.1	PFAM: Helix-turn-helix, type 11 domain protein; KEGG: son:SO3584 hypothetical protein
YP_739121.1	PFAM: NADPH-dependent FMN reductase; KEGG: son:SO3585 azoreductase, putative
YP_739122.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO3586 glyoxalase family protein
YP_739123.1	KEGG: son:SO3587 hypothetical protein
YP_739124.1	PFAM: GPR1/FUN34/yaaH family protein; KEGG: son:SO3588 gpr1/fun34/YaaH family protein
YP_739125.1	KEGG: son:SO3591 hypothetical protein
YP_739126.1	PFAM: MltA-interacting MipA family protein; KEGG: son:SO3592 putative outer membrane protein
YP_739127.1	KEGG: son:SO3593 hypothetical protein
YP_739128.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO3594 transcriptional regulatory protein RstA, putative
YP_739129.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO3595 sensor protein RstB, putative
YP_739130.1	PFAM: protein of unknown function DUF1289; KEGG: son:SO3596 hypothetical protein
YP_739131.1	KEGG: son:SO3597 hypothetical protein
YP_739132.1	catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide
YP_739133.1	TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO3599 sulfate ABC transporter, periplasmic sulfate-binding protein
YP_739134.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO3600 sulfate ABC transporter, permease protein
YP_739135.1	TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO3601 sulfate ABC transporter, permease protein
YP_739136.1	KEGG: son:SO3602 sulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase
YP_739137.1	PFAM: secretion protein HlyD family protein; KEGG: son:SO3603 secretion protein, HlyD family
YP_739138.1	KEGG: vch:VCA0048 hypothetical protein
YP_739139.1	PFAM: transposase, IS4 family protein; KEGG: son:SO3296 ISSod12, transposase
YP_739141.1	PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: son:SO3611 ATPase, AAA family
YP_739142.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_739143.1	KEGG: son:SO3614 hypothetical protein
YP_739144.1	PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO3615 hypothetical protein
YP_739146.1	KEGG: lpp:lpp1051 hypothetical protein
YP_739148.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO3631 glycerate dehydrogenase
YP_739149.1	KEGG: son:SO3632 hypothetical protein
YP_739150.1	functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system
YP_739151.1	PFAM: Nucleotidyl transferase; KEGG: son:SO3634 nucleotidyltransferase family protein
YP_739152.1	PFAM: aminoglycoside phosphotransferase; KEGG: son:SO3635 hypothetical phosphotransferase
YP_739153.1	PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: son:SO3636 organic solvent tolerance protein
YP_739154.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO3637 survival protein surA
YP_739155.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_739156.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_739157.1	protein associated with Co2+ and Mg2+ efflux
YP_739158.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_739159.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO3642 methyl-accepting chemotaxis protein
YP_739160.1	KEGG: son:SO3645 hypothetical protein
YP_739161.1	PFAM: dihydrofolate reductase region; KEGG: son:SO3646 dihydrofolate reductase
YP_739162.1	KEGG: son:SO3647 hypothetical protein
YP_739163.1	PFAM: protein of unknown function DUF1212; KEGG: son:SO3648 hypothetical protein
YP_739164.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_739165.1	involved in the peptidyltransferase reaction during translation
YP_739166.1	TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: son:SO3652 ribosomal protein L21
YP_739167.1	PFAM: Polyprenyl synthetase; KEGG: son:SO3653 octaprenyl-diphosphate synthase
YP_739168.1	KEGG: dde:Dde_2987 transposase
YP_739169.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_739170.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_739171.1	KEGG: cvi:CV1035 hypothetical protein
YP_739172.1	KEGG: son:SO3656 hypothetical protein
YP_739173.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO3657 transporter, LysE family
YP_739174.1	PFAM: peptidase S10, serine carboxypeptidase; KEGG: pcu:pc0501 hypothetical protein
YP_739175.1	KEGG: son:SO3659 thiol:disulfide interchange protein, putative
YP_739176.1	KEGG: son:SO3660 sigma-54 dependent transcriptional regulator/sensory box protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase
YP_739177.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sdn:Sden_2933 4Fe-4S ferredoxin, iron-sulfur binding
YP_739178.1	KEGG: ilo:IL2066 hypothetical protein
YP_739179.1	TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: dps:DP2240 probable methionine aminopeptidase, MAP
YP_739180.1	PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase
YP_739181.1	KEGG: son:SO3665 ABC transporter, ATP-binding/permease protein, putative; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase
YP_739182.1	KEGG: son:SO3676 hypothetical protein
YP_739183.1	KEGG: son:SO3677 hypothetical protein
YP_739184.1	PFAM: FAD dependent oxidoreductase; KEGG: son:SO3678 hypothetical protein
YP_739185.1	KEGG: son:SO3679 hypothetical protein
YP_739186.1	PFAM: protein of unknown function DUF924; KEGG: ilo:IL1577 hypothetical protein
YP_739187.1	KEGG: sdn:Sden_3307 extracellular solute-binding protein, family 3
YP_739188.1	PFAM: UspA domain protein; KEGG: son:SO3680 universal stress protein family
YP_739189.1	PFAM: UspA domain protein; KEGG: son:SO3681 universal stress protein family
YP_739190.1	KEGG: son:SO3682 hypothetical protein
YP_739191.1	PFAM: aldehyde dehydrogenase; KEGG: son:SO3683 coniferyl aldehyde dehydrogenase
YP_739192.1	PFAM: regulatory protein, TetR; KEGG: son:SO3684 transcriptional regulator, TetR family
YP_739193.1	PFAM: Curli production assembly/transport component CsgG; KEGG: son:SO3685 curli production assembly/transport component CsgG, putative
YP_739194.1	KEGG: son:SO3686 curli production assembly/transport component CsgF, putative
YP_739195.1	KEGG: son:SO3687 curli production assembly/transport component CsgE, putative
YP_739196.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3688 nitrogen regulation protein NtrY, putative
YP_739197.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: son:SO3689 sigma-54 dependent nitrogen response regulator
YP_739198.1	PFAM: protein of unknown function DUF214; KEGG: son:SO3690 ABC transporter, permease protein
YP_739199.1	PFAM: protein of unknown function DUF214; KEGG: sdn:Sden_2849 protein of unknown function DUF214
YP_739200.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3692 ABC transporter, ATP-binding protein
YP_739201.1	KEGG: son:SO3693 hypothetical protein
YP_739202.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SO3694 HlyD family secretion protein
YP_739203.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_739204.1	KEGG: son:SO3696 hypothetical protein
YP_739205.1	PFAM: protein of unknown function DUF1486; KEGG: son:SO3697 steroid delta-isomerase domain protein
YP_739206.1	KEGG: son:SO3699.1 hypothetical protein
YP_739207.1	KEGG: sat:SYN_01756 hypothetical membrane protein
YP_739208.1	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: xft:PD0021 type IV pilus assembly protein PilW
YP_739209.1	TIGRFAM: type IV pilus modification protein PilV; PFAM: methylation site containing protein; KEGG: csa:Csal_0486 methylation
YP_739210.1	PFAM: methylation site containing protein; KEGG: psp:PSPPH_0726 type IV pilin, putative
YP_739211.1	PFAM: methylation site containing protein; KEGG: neu:NE1746 fimbrial protein pilin
YP_739212.1	KEGG: son:SO3704 hypothetical protein
YP_739213.1	KEGG: vvu:VV12513 hypothetical protein
YP_739214.1	KEGG: son:SO3708 hypothetical protein
YP_739215.1	PFAM: periplasmic binding protein; KEGG: son:SO3709 ABC transporter, periplasmic substrate-binding protein, putative
YP_739216.1	KEGG: son:SO3711 hypothetical protein
YP_739217.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_739218.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_739219.1	PFAM: cobalbumin biosynthesis enzyme; KEGG: son:SO1037 cobinamide kinase/cobinamide phosphate guanylyltransferase
YP_739220.1	catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole
YP_739221.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_739222.1	PFAM: transport system permease protein; KEGG: son:SO1034 iron-compound ABC transporter, permease protein
YP_739223.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1033 iron-compound ABC transporter, ATP-binding protein, putative
YP_739224.1	PFAM: Phosphoglycerate mutase; KEGG: son:SO1031 alpha-ribazole-5'-phosphate phosphatase, putative
YP_739225.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_739226.1	KEGG: son:SO1077 hypothetical protein
YP_739227.1	KEGG: xac:XAC3287 hypothetical protein
YP_739229.1	KEGG: noc:Noc_0407 hypothetical protein
YP_739231.1	KEGG: son:SO1006 dienelactone hydrolase family protein; TIGRFAM: Twin-arginine translocation pathway signal; PFAM: dienelactone hydrolase
YP_739232.1	KEGG: son:SO1004 hypothetical protein
YP_739233.1	PFAM: MORN variant repeat protein; KEGG: son:SO1003 hypothetical protein
YP_739234.1	KEGG: son:SO1002 hypothetical protein
YP_739235.1	PFAM: Rhomboid family protein; KEGG: son:SO1000 rhomboid family protein
YP_739236.1	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7
YP_739237.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_739238.1	TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: sdn:Sden_3128 peptide chain release factor 2
YP_739239.1	TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO0988 formate dehydrogenase, alpha subunit
YP_739240.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: son:SO0987 methyl-accepting chemotaxis protein
YP_739241.1	TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: son:SO0986 chromate transporter, putative
YP_739242.1	TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: son:SO4539 serine protease, subtilase family
YP_739243.1	PFAM: MltA-interacting MipA family protein; KEGG: son:SO3592 putative outer membrane protein
YP_739245.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pha:PSHAa0853 response regulator (activator) in two-component regulatory
YP_739246.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO0981 sensor histidine kinase
YP_739247.1	RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA
YP_739248.1	PFAM: FAD dependent oxidoreductase; KEGG: son:SO0978 glycerol-3-phosphate dehydrogenase
YP_739249.1	PFAM: regulatory protein, MarR; KEGG: son:SO0977 transcriptional regulator, MarR family
YP_739250.1	PFAM: OsmC family protein; KEGG: son:SO0976 organic hydroperoxide resistance protein
YP_739251.1	KEGG: son:SO0975 hypothetical protein
YP_739252.1	KEGG: son:SO0974 hypothetical protein
YP_739253.1	KEGG: son:SO0973 hypothetical protein
YP_739254.1	PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0972 hypothetical protein
YP_739255.1	KEGG: son:SO0971 hypothetical protein
YP_739256.1	TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0970 fumarate reductase flavoprotein subunit precursor
YP_739257.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO0968 D-lactate dehydrogenase
YP_739258.1	PFAM: dienelactone hydrolase; KEGG: pha:PSHAa2188 hydrolase
YP_739259.1	KEGG: son:SO0962 hypothetical protein
YP_739260.1	KEGG: son:SO0961 hypothetical protein
YP_739261.1	PFAM: Spermine synthase; KEGG: son:SO0960 hypothetical spermidine synthase
YP_739262.1	PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: son:SO0959 cytosol aminopeptidase
YP_739263.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO0958 alkyl hydroperoxide reductase, C subunit
YP_739264.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0956 alkyl hydroperoxide reductase, F subunit
YP_739265.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0954 acetyltransferase, GNAT family
YP_739266.1	TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: son:SO0952 single-stranded-DNA-specific exonuclease RecJ
YP_739267.1	KEGG: son:SO0951 thiol:disulfide interchange protein DsbC
YP_739268.1	TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO0950 integrase/recombinase XerD
YP_739269.1	TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; KEGG: son:SO0949 branched-chain amino acid transport system II carrier protein BrnQ
YP_739270.1	PFAM: methyltransferase small; KEGG: son:SO0948 hypothetical protein
YP_739271.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: sdn:Sden_3723 response regulator receiver
YP_739272.1	KEGG: sdn:Sden_3722 ATP-binding region, ATPase-like protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; MHYT domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_739273.1	facilitates an early step in the assembly of the 50S subunit of the ribosome
YP_739274.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO0946 hypothetical protein
YP_739275.1	PFAM: acriflavin resistance protein; KEGG: son:SO0945 AcrB/AcrD/AcrF family protein
YP_739276.1	PFAM: Radical SAM domain protein; KEGG: son:SO0944 hypothetical protein
YP_739277.1	KEGG: son:SO0943 sensory box protein, putative; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein
YP_739278.1	KEGG: son:SO0942 hypothetical protein
YP_739279.1	KEGG: son:SO0941 hypothetical protein
YP_739280.1	PFAM: transcriptional regulator domain protein; KEGG: son:SO0940 transcriptional regulator-related protein
YP_739281.1	KEGG: son:SO0939 cytochrome c, putative
YP_739282.1	KEGG: son:SO0938 hypothetical protein
YP_739283.1	KEGG: son:SO0937 hypothetical protein
YP_739284.1	KEGG: son:SO0936 transcriptional regulator
YP_739285.1	KEGG: son:SO0935 Na+/H+ antiporter
YP_739286.1	PFAM: protein of unknown function DUF481; KEGG: son:SO0934 hypothetical protein
YP_739287.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_739288.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_739289.1	NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate
YP_739290.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_739291.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_739293.1	KEGG: son:SO0927 hypothetical protein
YP_739294.1	PFAM: EAL domain protein; phosphotransferase system, EIIC; KEGG: vch:VC1211 hypothetical protein
YP_739295.1	KEGG: son:SO0926 acetyltransferase, GNAT family
YP_739296.1	KEGG: son:SO0925 GGDEF domain protein
YP_739297.1	KEGG: son:SO0924 hypothetical protein
YP_739298.1	PFAM: protein of unknown function DUF306, Meta and HslJ; KEGG: son:SO0923 hypothetical protein
YP_739299.1	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO0922 proton/glutamate symporter
YP_739300.1	KEGG: son:SO0921 hypothetical protein
YP_739301.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0920 acetyltransferase, GNAT family
YP_739302.1	PFAM: Amino acid transporter, transmembrane; KEGG: son:SO0919 serine transporter, putative
YP_739303.1	PFAM: peptidase S45, penicillin amidase; KEGG: son:SO0918 aculeacin A acylase
YP_739304.1	pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog
YP_739305.1	PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: son:SO0916 putative acetyltransferase
YP_739306.1	PFAM: beta-lactamase; KEGG: son:SO0914 hypothetical protein
YP_739307.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_739308.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
YP_739309.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
YP_739310.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_739311.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_739312.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_739313.1	PFAM: aldo/keto reductase; KEGG: son:SO0900 oxidoreductase, aldo/keto reductase family
YP_739314.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO0899 glyoxalase family protein
YP_739315.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
YP_739316.1	PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: son:SO0895 pirin family protein
YP_739317.1	KEGG: lic:LIC13249 hypothetical protein
YP_739320.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO0886 hypothetical protein
YP_739321.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0885 ABC transporter, ATP-binding protein
YP_739322.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO0884 hypothetical protein
YP_739323.1	PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: son:SO0883 hypothetical protein
YP_739324.1	PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: son:SO0882 oxidoreductase, GMC family
YP_739325.1	KEGG: son:SO0881 hypothetical protein
YP_739326.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO0880 hypothetical protein
YP_739327.1	PFAM: protein of unknown function UPF0270; KEGG: son:SO0879 hypothetical protein
YP_739328.1	PFAM: phosphoribulokinase/uridine kinase; KEGG: son:SO0878 phosphoribulokinase
YP_739329.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0877 acetyltransferase, GNAT family
YP_739330.1	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide
YP_739331.1	Regulatory factor involved in maltose metabolism
YP_739332.1	TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: son:SO0874 DnaK suppressor protein
YP_739333.1	PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: son:SO0873 glutamyl-tRNA synthetase domain protein
YP_739334.1	TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: son:SO0872 tRNA nucleotidyltransferase (CCA-adding enzyme)
YP_739335.1	KEGG: son:SO0871 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_739336.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_739337.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_739338.1	KEGG: son:SO0868 hypothetical protein
YP_739339.1	PFAM: Curlin associated repeat protein; KEGG: son:SO0866 minor curlin subunit CsgB, putative
YP_739340.1	PFAM: Curlin associated repeat protein; KEGG: son:SO0865 hypothetical protein
YP_739341.1	PFAM: regulatory protein, LuxR; KEGG: son:SO0864 transcriptional regulator, LuxR family
YP_739342.1	KEGG: son:SO0863 hypothetical protein
YP_739343.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_739344.1	PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: son:SO0861 hypothetical protein
YP_739345.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO0860 response regulator
YP_739346.1	KEGG: son:SO0859 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_739347.1	TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO0858 sodium:alanine symporter family protein
YP_739348.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0857 ABC transporter, ATP-binding protein
YP_739349.1	PFAM: protein of unknown function DUF214; KEGG: son:SO0856 putative ABC transport system permease protein
YP_739350.1	KEGG: son:SO0855 hypothetical protein
YP_739351.1	PFAM: methylation site containing protein; KEGG: son:SO0854 type IV pilin, putative
YP_739352.1	PFAM: methylation site containing protein; KEGG: son:SO0853 pilin, putative
YP_739353.1	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: son:SO0852 type IV pilus assembly protein PilV
YP_739354.1	TIGRFAM: Prepilin-type cleavage/methylation-like; KEGG: son:SO0851 hypothetical protein
YP_739355.1	KEGG: son:SO0850 hypothetical protein
YP_739356.1	PFAM: NapD family protein; KEGG: son:SO0849 napD protein
YP_739357.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_739358.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway
YP_739359.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA
YP_739360.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: son:SO0845 cytochrome c-type protein NapB
YP_739361.1	KEGG: son:SO0844 hypothetical protein
YP_739362.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0843 transcriptional regulator, LysR family
YP_739363.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_739364.1	KEGG: son:SO0841 GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3
YP_739365.1	PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase
YP_739366.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0839 transcriptional regulator, LysR family
YP_739367.1	PFAM: penicillin-binding protein, transpeptidase; KEGG: son:SO0837 beta-lactamase, putative
YP_739368.1	KEGG: son:SO0835 hypothetical protein
YP_739369.1	PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; KEGG: son:SO0834 sprT protein, putative
YP_739370.1	PFAM: Endonuclease I; KEGG: son:SO0833 endonuclease I
YP_739371.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_739372.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_739373.1	PFAM: Alkaline phosphatase; KEGG: son:SO0830 alkaline phosphatase
YP_739374.1	PFAM: methyltransferase small; Methyltransferase small, N-terminal domain protein; KEGG: son:SO0828 ribosomal RNA small subunit methyltransferase C
YP_739375.1	PFAM: protein of unknown function DUF469; KEGG: vvu:VV20828 hypothetical protein
YP_739376.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_739377.1	PFAM: BolA family protein; KEGG: son:SO3949 BolA/YrbA family protein
YP_739378.1	KEGG: son:SO3950 SpoIIAA family protein
YP_739379.1	PFAM: toluene tolerance family protein; KEGG: son:SO3951 hypothetical protein
YP_739380.1	PFAM: Mammalian cell entry related domain protein; KEGG: son:SO3952 mce-related protein
YP_739381.1	PFAM: protein of unknown function DUF140; KEGG: son:SO3953 putative membrane protein
YP_739382.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3954 ABC transporter, ATP-binding protein, putative
YP_739383.1	KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS)
YP_739384.1	forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis
YP_739385.1	PFAM: protein of unknown function DUF1239; KEGG: son:SO3958 hypothetical protein
YP_739386.1	PFAM: OstA family protein; KEGG: son:SO3959 hypothetical protein
YP_739387.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3960 ABC transporter, ATP-binding protein
YP_739388.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_739389.1	TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: son:SO3962 ribosomal subunit interface protein
YP_739390.1	TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: son:SO3963 nitrogen regulatory IIA protein
YP_739391.1	PFAM: Uncharacterized P-loop ATPase protein UPF0042; KEGG: son:SO3964 hypothetical protein
YP_739392.1	TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: son:SO3965 phosphocarrier protein NPR
YP_739393.1	TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: son:SO3966 magnesium transporter
YP_739394.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: son:SO3967 hypothetical protein
YP_739395.1	PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: son:SO3969 OmpA family protein
YP_739396.1	PFAM: transposase IS3/IS911 family protein; KEGG: son:SO3972 hypothetical transposase
YP_739397.1	PFAM: protein of unknown function RIO1; KEGG: son:SO3973 RIO1/ZK632.3/MJ0444 family, putative
YP_739399.1	KEGG: son:SO3974 hypothetical protein
YP_739400.1	KEGG: son:SO3975 hypothetical protein
YP_739401.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: vvy:VVA0651 GGDEF family protein
YP_739402.1	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552
YP_739403.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: son:SO3981 nitrate/nitrite sensor protein NarQ
YP_739404.1	PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: son:SO3982 DNA-binding nitrate/nitrite response regulator
YP_739405.1	PFAM: Uncharacterized conserved protein UCP006287; KEGG: son:SO3983 hypothetical protein
YP_739406.1	PFAM: Mg2 transporter protein, CorA family protein; KEGG: son:SO3984 magnesium transporter, putative
YP_739407.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO3985 hypothetical protein
YP_739408.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive
YP_739409.1	KEGG: son:SO3987 hypothetical protein
YP_739410.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO3988 aerobic respiration control protein ArcA
YP_739411.1	PFAM: peptidase S15; peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: son:SO3990 dipeptidyl peptidase IV
YP_739412.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_739413.1	PFAM: NERD domain protein; KEGG: pha:PSHAb0100 putative orphan protein
YP_739415.1	PFAM: Uncharacterized protein UPF0114; KEGG: son:SO3997 hypothetical protein
YP_739417.1	PFAM: sodium:dicarboxylate symporter; KEGG: son:SO4004 proton/glutamate symporter, putative
YP_739418.1	KEGG: son:SO4005 hypothetical protein
YP_739419.1	KEGG: son:SO4006 hypothetical protein
YP_739420.1	KEGG: son:SO4007 hypothetical protein
YP_739421.1	KEGG: son:SO4008 hypothetical protein
YP_739422.1	PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: cps:CPS_2652 transcriptional regulator, LacI family
YP_739423.1	TIGRFAM: putative alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein
YP_739424.1	TIGRFAM: putative alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2650 alpha-1,2-mannosidase family protein
YP_739425.1	TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: cps:CPS_2649 glucose/galactose transporter family protein
YP_739426.1	PFAM: PfkB domain protein; KEGG: cps:CPS_2648 carbohydrate kinase, PfkB family
YP_739427.1	PFAM: N-acylglucosamine 2-epimerase; KEGG: cps:CPS_2647 hypothetical protein
YP_739428.1	PFAM: Fimbrial protein; KEGG: ecs:ECs2107 putative adhesin
YP_739429.1	PFAM: EAL domain protein; KEGG: son:SOA0109 hypothetical protein
YP_739430.1	PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: stm:STM4593 putative fimbrial usher protein
YP_739431.1	PFAM: pili assembly chaperone; KEGG: stm:STM0176 putative fimbrial chaparone
YP_739432.1	PFAM: Fimbrial protein; KEGG: bpm:BURPS1710b_2233 fimbrial subunit
YP_739434.1	KEGG: son:SO3866 site-specific recombinase, phage integrase family
YP_739435.1	KEGG: ilo:IL1673 methyl-accepting chemotaxis protein (2 PAS,MCP domains); TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_739436.1	KEGG: son:SO4011 hypothetical protein
YP_739437.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: pha:PSHAa2478 putative TonB-dependent receptor protein
YP_739438.1	KEGG: son:SO4012 hypothetical protein
YP_739439.1	KEGG: vpa:VPA0336 hypothetical protein
YP_739443.1	PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO0635 peptidyl-prolyl cis-trans isomerase C
YP_739444.1	KEGG: son:SO0633 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase
YP_739445.1	TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; KEGG: son:SO0632 ATP-dependent helicase HrpB
YP_739446.1	TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0630 TonB-dependent receptor
YP_739447.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO0628 GGDEF domain protein
YP_739448.1	TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase; KEGG: son:SO0627 putative 2'-5' RNA ligase
YP_739449.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO0625 hypothetical protein
YP_739450.1	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons
YP_739451.1	KEGG: son:SO0623 hypothetical protein
YP_739452.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO0622 DNA-binding response regulator
YP_739453.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO0621 sensor histidine kinase
YP_739454.1	KEGG: son:SO0620 hypothetical protein
YP_739455.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_739456.1	PFAM: arginine N-succinyltransferase beta subunit; KEGG: son:SO0618 arginine N-succinyltransferase
YP_739457.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate
YP_739458.1	PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: son:SO0616 esterase, putative
YP_739459.1	KEGG: son:SO0615 hypothetical protein
YP_739460.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: son:SO0614 dipeptidyl peptidase IV, putative
YP_739461.1	TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: son:SO0613 para-aminobenzoate synthase glutamine amidotransferase, component II
YP_739462.1	PFAM: Stringent starvation protein B; KEGG: son:SO0612 stringent starvation protein b
YP_739463.1	transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation
YP_739464.1	PFAM: cytochrome c1; KEGG: son:SO0610 ubiquinol-cytochrome c reductase cytochrome c1 subunit
YP_739465.1	PFAM: Cytochrome b/b6, N-terminal domain protein; Cytochrome b/b6, C-terminal domain protein; KEGG: son:SO0609 ubiquinol-cytochrome c reductase, cytochrome b
YP_739466.1	KEGG: son:SO0608 ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: Twin-arginine translocation pathway signal; ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein
YP_739467.1	TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: son:SO0606 hflC protein
YP_739468.1	TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: son:SO0605 hflK protein
YP_739469.1	PFAM: GTP-binding protein, HSR1-related; KEGG: son:SO0604 GTP-binding protein HflX
YP_739470.1	TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: son:SO0603 host factor-I protein
YP_739471.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_739472.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_739473.1	PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: son:SO0600 N-acetylmuramoyl-L-alanine amidase
YP_739474.1	PFAM: protein of unknown function UPF0079; KEGG: son:SO0599 conserved hypothetical protein TIGR00150
YP_739475.1	TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: son:SO0598 YjeF protein
YP_739476.1	KEGG: son:SO0595 hypothetical protein
YP_739477.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_739478.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_739479.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_739480.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: cps:CPS_3514 membrane protein
YP_739481.1	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO0588 transporter, putative
YP_739482.1	PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: son:SO0587 glycerophosphoryl diester phosphodiesterase
YP_739483.1	KEGG: son:SO0586 hypothetical protein
YP_739484.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein
YP_739485.1	TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: son:SO0584 methyl-accepting chemotaxis protein
YP_739486.1	PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: son:SO0583 bacterioferritin-associated ferredoxin
YP_739487.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
YP_739488.1	KEGG: son:SO0581 hypothetical protein
YP_739489.1	PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: son:SO0579 serine/threonine protein kinase, putative
YP_739490.1	KEGG: son:SO0578 hypothetical protein
YP_739491.1	KEGG: son:SO0577 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_739492.1	PFAM: PhoH family protein; SMART: AAA ATPase; Nucleotide binding protein, PINc; KEGG: son:SO0576 PhoH family protein
YP_739493.1	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA
YP_739494.1	KEGG: son:SO0573 hypothetical protein
YP_739495.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_739496.1	PFAM: response regulator receiver; KEGG: son:SO0570 response regulator
YP_739497.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO0569 sensory box/GGDEF family protein
YP_739498.1	PFAM: protein of unknown function DUF1260; KEGG: son:SO0568 hypothetical protein
YP_739499.1	KEGG: son:SO0567 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase
YP_739500.1	PFAM: ABC-3 protein; KEGG: son:SO0566 ABC 3 transport family protein
YP_739501.1	PFAM: periplasmic solute binding protein; KEGG: son:SO0565 adhesion protein, putative
YP_739502.1	KEGG: son:SO0564 hypothetical protein
YP_739503.1	KEGG: sdn:Sden_0526 hypothetical protein
YP_739504.1	KEGG: son:SO0563 hypothetical protein
YP_739505.1	KEGG: son:SO0562 hypothetical protein
YP_739506.1	PFAM: MscS Mechanosensitive ion channel; KEGG: son:SO0560.2 hypothetical small-conductance mechanosensitive channel
YP_739507.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
YP_739508.1	PFAM: aldo/keto reductase; KEGG: vpa:VPA1163 oxidoreductase, aldo/keto reductase 2 family
YP_739509.1	PFAM: MaoC domain protein dehydratase; KEGG: son:SO0559 MaoC domain protein
YP_739510.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0558 smtA protein
YP_739511.1	PFAM: GumN family protein; KEGG: son:SO0557 hypothetical protein
YP_739512.1	KEGG: son:SO0556 hypothetical protein
YP_739513.1	PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: son:SO0555 hypothetical protein
YP_739514.1	KEGG: son:SO0554 hypothetical protein
YP_739515.1	KEGG: son:SO0553 hypothetical protein
YP_739516.1	KEGG: son:SO0552 hypothetical protein
YP_739517.1	KEGG: son:SO0551 hypothetical protein
YP_739518.1	KEGG: son:SO0550 hypothetical protein
YP_739519.1	PFAM: response regulator receiver; KEGG: son:SO0549 chemotaxis protein CheY/response regulator receiver domain protein
YP_739520.1	PFAM: histone family protein DNA-binding protein; KEGG: son:SO0548 DNA-binding protein, HU family
YP_739521.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO0547 hypothetical protein
YP_739522.1	TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO0546 ribosomal protein S6 modification protein
YP_739523.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: son:SO0545 response regulator
YP_739524.1	PFAM: response regulator receiver; KEGG: son:SO0544.1 hypothetical CheY-homologous receiver domain protein
YP_739525.1	KEGG: son:SO0544 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_739526.1	KEGG: son:SO0543 hypothetical protein
YP_739527.1	KEGG: sdn:Sden_0651 hypothetical protein
YP_739528.1	TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF1704; KEGG: son:SO0542 hypothetical protein
YP_739530.1	PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: son:SO0541 metallo-beta-lactamase family protein
YP_739531.1	KEGG: son:SO0540 hypothetical protein
YP_739532.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0539 transporter, putative
YP_739533.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate
YP_739534.1	KEGG: son:SO0536 redox-active disulfide protein 2
YP_739535.1	PFAM: permease; KEGG: son:SO0535 hypothetical protein
YP_739536.1	PFAM: Bile acid:sodium symporter; KEGG: son:SO0534 arsenical pump membrane protein, putative
YP_739537.1	PFAM: regulatory protein, ArsR; KEGG: son:SO0532 arsenical resistence operon repressor
YP_739538.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1156 TonB-dependent receptor
YP_739539.1	PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: son:SO0528 hypothetical protein
YP_739540.1	KEGG: vpa:VPA0991 hypothetical protein
YP_739541.1	KEGG: vpa:VPA0990 hypothetical protein
YP_739542.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: noc:Noc_1911 two component sigma-54 specific, transcriptional regulator, fis family
YP_739543.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0527 hypothetical protein
YP_739544.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0526 acetyltransferase, GNAT family
YP_739545.1	TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0525 drug resistance transporter, EmrB/QacA family protein
YP_739546.1	PFAM: secretion protein HlyD family protein; KEGG: son:SO0524 HlyD family secretion protein
YP_739547.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0523 transcriptional regulator, LysR family
YP_739548.1	forms homopentamer; channel that opens in response to pressure or hypoosmotic shock
YP_739549.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0521 hypothetical protein
YP_739550.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: son:SO0520 heavy metal efflux pump, CzcA family
YP_739551.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SO0519 cation efflux protein, putative
YP_739552.1	PFAM: outer membrane efflux protein; KEGG: son:SO0518 outer membrane efflux family protein, putative
YP_739553.1	KEGG: son:SO0516 hypothetical protein
YP_739554.1	KEGG: son:SO0515 hypothetical protein
YP_739555.1	KEGG: son:SO0514 hypothetical protein
YP_739556.1	PFAM: Class I peptide chain release factor; KEGG: son:SO0513 hypothetical protein
YP_739557.1	catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis
YP_739558.1	TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: son:SO0511 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_739559.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO0510 oxidoreductase, short-chain dehydrogenase/reductase family
YP_739560.1	PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr4870 MFS permease
YP_739561.1	KEGG: son:SO0508 hypothetical protein
YP_739562.1	TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: son:SO0506 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases
YP_739563.1	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin
YP_739564.1	PFAM: protein of unknown function DUF1524 RloF; KEGG: cch:Cag_0325 hypothetical protein
YP_739565.1	KEGG: son:SO0492 hypothetical flavoprotein oxygenase
YP_739566.1	PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: son:SO4539 serine protease, subtilase family
YP_739567.1	PFAM: fatty acid cistrans isomerase; KEGG: vvy:VVA0636 fatty acid cis/trans isomerase
YP_739568.1	PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO0491 peptidase, M13 family
YP_739569.1	PFAM: transcriptional regulator domain protein; KEGG: son:SO0490 transcriptional regulator
YP_739570.1	KEGG: son:SO0488 copper ABC transporter, permease protein
YP_739571.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0487 copper ABC transporter, ATP-binding protein
YP_739572.1	PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: son:SO0486 copper ABC transporter, periplasmic copper-binding protein
YP_739573.1	PFAM: NosL family protein; KEGG: son:SO0485 NosL protein
YP_739574.1	PFAM: Polysulphide reductase, NrfD; KEGG: son:SO0484 formate-dependent nitrite reductase, NrfD protein
YP_739575.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO0483 formate-dependent nitrite reductase, NrfC protein
YP_739576.1	KEGG: son:SO0482 formate-dependent nitrite reductase, NrfG protein
YP_739577.1	PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0481 peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_739578.1	SMART: Rhodanese domain protein; KEGG: son:SO0480 hypothetical protein
YP_739579.1	KEGG: son:SO0479 cytochrome c, putative
YP_739580.1	TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF
YP_739581.1	PFAM: cytochrome C biogenesis protein; KEGG: son:SO0477 cytochrome c-type biogenesis protein NrfF precursor
YP_739582.1	PFAM: Redoxin domain protein; KEGG: son:SO0476 thioredoxin, putative
YP_739583.1	KEGG: son:SO0474 hypothetical protein
YP_739584.1	PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; KEGG: son:SO3999 sensor histidine kinase
YP_739585.1	KEGG: son:SO4002 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; extracellular solute-binding protein, family 3
YP_739586.1	PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO4003 response regulator
YP_739587.1	KEGG: xcv:XCV4020 putative mitomycin resistance protein
YP_739588.1	PFAM: protein of unknown function UPF0118; KEGG: son:SO0472 hypothetical protein
YP_739589.1	PFAM: Redoxin domain protein; Thioredoxin domain; KEGG: cps:CPS_0994 hypothetical protein
YP_739590.1	KEGG: sdn:Sden_3320 hypothetical protein
YP_739591.1	PFAM: dihydroorotate dehydrogenase; 2-nitropropane dioxygenase, NPD; KEGG: son:SO0471 hypothetical dioxygenase
YP_739592.1	KEGG: son:SO0470 hypothetical protein
YP_739593.1	KEGG: son:SO0468.1 hypothetical protein
YP_739594.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
YP_739595.1	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.
YP_739596.1	KEGG: vvy:VV0261 hypothetical protein
YP_739597.1	KEGG: hch:HCH_06329 hypothetical protein
YP_739598.1	PFAM: SEC-C motif domain protein; KEGG: ppr:PBPRA0194 hypothetical protein
YP_739599.1	PFAM: NUDIX hydrolase; KEGG: son:SO0464 MutT/nudix family protein
YP_739600.1	PFAM: protein of unknown function, zinc metallopeptidase putative; KEGG: son:SO0463 hypothetical protein
YP_739601.1	KEGG: son:SO0462 hypothetical protein
YP_739602.1	KEGG: son:SO0461 hypothetical protein
YP_739603.1	PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: son:SO0459 hypothetical protein
YP_739604.1	KEGG: son:SO0458 hypothetical protein
YP_739605.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: son:SO0456 immunogenic-related protein
YP_739606.1	TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO0455 hypothetical transporter
YP_739607.1	KEGG: son:SO0454 hypothetical protein
YP_739608.1	KEGG: chy:CHY_1906 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein
YP_739609.1	PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0453 peptidyl-prolyl cis-trans isomerase FkbP
YP_739610.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0452 thioredoxin 2
YP_739611.1	TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: vch:VCA0025 transporter, NadC family
YP_739613.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: vpa:VPA0476 hypothetical protein
YP_739614.1	PFAM: major facilitator superfamily MFS_1; KEGG: son:SO0450 major facilitator family protein
YP_739615.1	PFAM: PepSY-associated TM helix domain protein; KEGG: son:SO0449 hypothetical protein
YP_739616.1	KEGG: son:SO0448 hypothetical protein
YP_739617.1	KEGG: son:SO0447 hypothetical protein
YP_739618.1	PFAM: band 7 protein; KEGG: son:SO0445 HflC protein, putative
YP_739619.1	PFAM: permease; KEGG: son:SO0444 hypothetical protein
YP_739620.1	mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators
YP_739621.1	involved in de novo purine biosynthesis
YP_739622.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_739623.1	KEGG: son:SO0440 hypothetical protein
YP_739624.1	KEGG: son:SO0439 hypothetical protein
YP_739625.1	PFAM: short-chain dehydrogenase/reductase SDR; glucose/ribitol dehydrogenase; KEGG: son:SO0438 short chain dehydrogenase
YP_739626.1	KEGG: son:SO0437 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein
YP_739627.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_739628.1	binds specifically to the major sigma factor sigma 70; active in stationary phase
YP_739629.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_739630.1	YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate
YP_739631.1	PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO0429 peptidase, M13 family
YP_739632.1	PFAM: surface antigen (D15); Patatin; KEGG: son:SO0428 hypothetical protein
YP_739633.1	KEGG: son:SO0427 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_739634.1	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_739635.1	KEGG: son:SO0425 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein
YP_739636.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_739637.1	activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex
YP_739638.1	involved in regulation of beta-lactamase; putative signaling protein
YP_739639.1	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: son:SO0421 AmpD protein
YP_739640.1	KEGG: sdn:Sden_3387 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase
YP_739641.1	PFAM: methylation site containing protein; KEGG: pst:PSPTO0927 type IV pilus biogenesis protein
YP_739642.1	TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: son:SO0416 type IV pilus biogenesis protein PilB
YP_739643.1	PFAM: type II secretion system protein; KEGG: son:SO0415 type IV pilus biogenesis protein PilC
YP_739644.1	PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: son:SO0414 leader peptidase (prepilin peptidase) / N-methyltransferase
YP_739645.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_739646.1	PFAM: protein of unknown function DUF1342; KEGG: son:SO0412 hypothetical protein
YP_739647.1	PFAM: protein of unknown function DUF329; KEGG: son:SO0411 hypothetical protein
YP_739648.1	TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: son:SO0410 mutator mutT protein
YP_739649.1	KEGG: son:SO0409 hypothetical protein
YP_739650.1	PFAM: Ppx/GppA phosphatase; KEGG: son:SO0408 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase
YP_739651.1	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
YP_739652.1	TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0406 thioredoxin 1
YP_739653.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_739654.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0402 transcriptional regulator, LysR family
YP_739655.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO0401 alcohol dehydrogenase, zinc-containing
YP_739656.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0400 hypothetical protein
YP_739657.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_739658.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_739659.1	PFAM: fumarate reductase respiratory complex, transmembrane subunit; KEGG: son:SO0397 fumarate reductase cytochrome B subunit
YP_739660.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit
YP_739661.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_739662.1	TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; KEGG: son:SO0394 tRNA-dihydrouridine synthase B
YP_739663.1	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription
YP_739664.1	PFAM: Hemerythrin HHE cation binding domain protein; KEGG: son:SO4302 hypothetical protein
YP_739665.1	PFAM: AAA-4 family protein; KEGG: son:SO4303 hypothetical protein
YP_739666.1	PFAM: HupE/UreJ protein; KEGG: son:SO4304 urease accessory protein UreJ
YP_739667.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein
YP_739668.1	TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO4306 integrase/recombinase XerC
YP_739669.1	PFAM: protein of unknown function DUF484; KEGG: son:SO4307 hypothetical protein
YP_739670.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_739671.1	TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4309 diaminopimelate decarboxylase
YP_739672.1	KEGG: son:SO4310 hypothetical protein
YP_739673.1	PFAM: Frataxin family protein; KEGG: son:SO4311 CyaY protein
YP_739674.1	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
YP_739675.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_739676.1	PFAM: Uroporphyrinogen III synthase HEM4; KEGG: son:SO4314 uroporphyrinogen-III synthase
YP_739677.1	PFAM: protein of unknown function DUF513, hemX; KEGG: son:SO4315 hemX protein
YP_739678.1	PFAM: HemY domain protein; KEGG: son:SO4316 HemY protein
YP_739679.1	TIGRFAM: putative outer membrane adhesin like protein; PFAM: Hemolysin-type calcium-binding region; KEGG: son:SO4317 RTX toxin, putative
YP_739680.1	PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4318 toxin secretion ATP-binding protein
YP_739681.1	TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: son:SO4319 HlyD family secretion protein
YP_739682.1	TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: son:SO4320 agglutination protein
YP_739683.1	PFAM: OmpA/MotB domain protein; KEGG: son:SO4321 OmpA family protein
YP_739684.1	KEGG: son:SO4322 hypothetical protein
YP_739685.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO4323 GGDEF domain protein
YP_739686.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: son:SO4324 GGDEF domain protein
YP_739687.1	TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: son:SO4325 ATP-dependent DNA helicase Rep
YP_739688.1	PFAM: protein of unknown function DUF526; KEGG: son:SO4329 hypothetical protein
YP_739689.1	KEGG: son:SO4330 hypothetical protein
YP_739690.1	KEGG: son:SO4331 hypothetical protein
YP_739691.1	PFAM: protein of unknown function DUF1006; KEGG: son:SO4332 hypothetical protein
YP_739692.1	KEGG: son:SO4333 hypothetical protein
YP_739693.1	PFAM: Inner membrane CreD family protein; KEGG: son:SO4334 inner membrane protein, putative
YP_739694.1	PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO4335 phosphatidylglycerophosphatase B, putative
YP_739695.1	KEGG: vch:VC0810 hypothetical protein
YP_739696.1	KEGG: son:SO4342 hypothetical protein
YP_739697.1	PFAM: aminotransferase, class V; KEGG: son:SO4343 aminotransferase, class V
YP_739698.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_739699.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_739700.1	KEGG: son:SO4346 acetolactate synthase small subunit
YP_739701.1	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit
YP_739702.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_739703.1	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate
YP_739704.1	PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: son:SO4351 CBS domain protein
YP_739705.1	KEGG: son:SO4353 hypothetical protein
YP_739706.1	PFAM: protein of unknown function UPF0153; KEGG: son:SO4354 hypothetical Fe-S-cluster oxidoreductase
YP_739707.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; histidine kinase, HAMP region domain protein; KEGG: ilo:IL2535 intracellular signaling protein (GAF,GGDEF domains)
YP_739708.1	PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: pfl:PFL_3664 periplasmic sugar-binding domain protein
YP_739709.1	catalyzes branch migration in Holliday junction intermediates
YP_739710.1	KEGG: son:SO4365 hypothetical protein
YP_739711.1	KEGG: son:SO4366 hypothetical protein
YP_739712.1	PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO4367 acyltransferase family protein
YP_739713.1	KEGG: son:SO4368 acyl carrier protein, putative
YP_739714.1	carries the fatty acid chain in fatty acid biosynthesis
YP_739715.1	KEGG: son:SO4370 hypothetical protein
YP_739716.1	KEGG: son:SO4371 hypothetical protein
YP_739717.1	KEGG: son:SO4372 thioester dehydrase family protein
YP_739718.1	PFAM: glycosyl transferase, family 2; lipid A biosynthesis acyltransferase; KEGG: son:SO4373 glycosyl transferase, group 2 family protein
YP_739719.1	PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO4374 histidine ammonia-lyase, putative
YP_739720.1	PFAM: thioesterase superfamily protein; KEGG: son:SO4375 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_739721.1	KEGG: son:SO4376 hypothetical protein
YP_739722.1	KEGG: son:SO4377 hypothetical protein
YP_739723.1	PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: son:SO4378 FAD-binding protein
YP_739724.1	KEGG: son:SO4379 hypothetical protein
YP_739725.1	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_739726.1	KEGG: son:SO4381 thioester dehydrase family protein
YP_739727.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_739728.1	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_739729.1	KEGG: son:SO4384 hypothetical protein
YP_739730.1	TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: vvy:VV1866 hypothetical protein
YP_739731.1	PFAM: plasmid stabilization system; KEGG: vch:VCA0385 hypothetical protein
YP_739732.1	KEGG: bja:bll8089 hypothetical protein
YP_739733.1	PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO4393 acetyltransferase, GNAT family
YP_739734.1	PFAM: electron transport protein SCO1/SenC; KEGG: pae:PA0114 hypothetical protein
YP_739735.1	PFAM: chemotaxis sensory transducer; KEGG: psp:PSPPH_5044 methyl-accepting chemotaxis protein
YP_739736.1	TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: xcv:XCV4391 benzoate permease
YP_739737.1	PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: lpp:plpp0134 hypothetical protein
YP_739738.1	PFAM: Rhodanese domain protein; KEGG: son:SO4394 phage shock protein E
YP_739739.1	KEGG: son:SO4395 hypothetical protein
YP_739740.1	FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds
YP_739741.1	TIGRFAM: thioesterase domain, putative; KEGG: son:SO4397 hypothetical acetyltransferase
YP_739742.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_739743.1	KEGG: son:SO4399 hypothetical protein
YP_739744.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO4400 proline iminopeptidase, putative
YP_739745.1	RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease
YP_739746.1	KEGG: son:SO4402 hypothetical protein
YP_739747.1	KEGG: son:SO4403 hypothetical protein
YP_739748.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, transmembrane region; KEGG: tdn:Tmden_1328 diguanylate cyclase (GGDEF domain)
YP_739749.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4404 iron-sulfur cluster-binding protein
YP_739750.1	KEGG: son:SO4405 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase
YP_739751.1	PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: vpa:VPA0384 hypothetical protein
YP_739752.1	KEGG: vpa:VPA0383 hypothetical protein
YP_739753.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vpa:VPA0382 putative sorbitol-6-phosphate 2-dehydrogenase
YP_739754.1	PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: vpa:VPA0381 putative transcription regulator
YP_739755.1	TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: son:SO4408 virulence regulator BipA
YP_739756.1	forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme
YP_739757.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: eca:ECA0876 TonB-dependent ferric aerobactin receptor
YP_739759.1	PFAM: sodium:dicarboxylate symporter; KEGG: sdn:Sden_3453 sodium:dicarboxylate symporter
YP_739760.1	KEGG: son:SO4412 hypothetical protein
YP_739761.1	PFAM: aminotransferase, class V; KEGG: son:SO4413 hypothetical kynureninase
YP_739762.1	KEGG: son:SO4414 hypothetical protein
YP_739763.1	functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters
YP_739764.1	PFAM: regulatory protein, TetR; KEGG: hch:HCH_03535 transcriptional regulator
YP_739765.1	KEGG: rso:RS05497 hypothetical protein
YP_739766.1	PFAM: CHAP domain containing protein; KEGG: son:SO4418 trypanothione synthetase domain protein
YP_739767.1	KEGG: son:SO4419 hypothetical protein
YP_739768.1	PFAM: peptidase M23B; KEGG: son:SO4420 peptidase, M23/M37 family
YP_739769.1	KEGG: son:SO4421 hypothetical protein
YP_739770.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4423.1 hypothetical ferric aerobactin receptor
YP_739771.1	KEGG: dde:Dde_2987 transposase
YP_739772.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_739773.1	PFAM: protein of unknown function UPF0057; KEGG: son:SO4423 hypothetical protein
YP_739774.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO4425 GGDEF family protein
YP_739775.1	TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: sdn:Sden_0111 pseudouridine synthase RluA-like protein
YP_739776.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4427 sensor histidine kinase
YP_739777.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4428 DNA-binding response regulator
YP_739778.1	KEGG: son:SO4429 hypothetical protein
YP_739779.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4446 molybdenum ABC transporter, ATP-binding protein
YP_739780.1	TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4447 molybdenum ABC transporter, permease protein
YP_739781.1	TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO4448 molybdenum ABC transporter, periplasmic molybdenum-binding protein
YP_739782.1	PFAM: molybdopterin biosynthesis MoaE; KEGG: son:SO4449 molybdenum cofactor biosynthesis protein E
YP_739783.1	TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: son:SO4450 molybdenum cofactor biosynthesis protein D
YP_739784.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_739785.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_739786.1	PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: son:SO4453 electron transfer flavoprotein-ubiquinone oxidoreductase, putative
YP_739787.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4454 methyl-accepting chemotaxis protein
YP_739788.1	KEGG: son:SO4455 hypothetical protein
YP_739789.1	PFAM: 3-alpha; MOSC domain containing protein; KEGG: son:SO4456 hypothetical protein
YP_739790.1	TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO4457 GGDEF domain protein
YP_739791.1	PFAM: PfkB domain protein; KEGG: son:SO4458 carbohydrate kinase, PfkB family
YP_739792.1	KEGG: son:SO4461 hypothetical protein
YP_739793.1	KEGG: son:SO4462 hypothetical protein
YP_739794.1	PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4465 hypothetical protein
YP_739795.1	PFAM: chemotaxis sensory transducer; KEGG: son:SO4466 methyl-accepting chemotaxis protein
YP_739796.1	PFAM: protein of unknown function DUF1255; KEGG: son:SO4467 hypothetical protein
YP_739797.1	PFAM: regulatory protein, TetR; KEGG: son:SO4468 transcriptional regulator, TetR family
YP_739798.1	PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO4469 alcohol dehydrogenase, iron-containing
YP_739799.1	KEGG: son:SO4470 hypothetical protein
YP_739800.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: son:SO4471 nitrogen regulation protein
YP_739801.1	KEGG: son:SO4472 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase
YP_739802.1	PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: son:SO4473 outer membrane protein, putative
YP_739803.1	KEGG: son:SO4474 hypothetical protein
YP_739804.1	TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: son:SO4475 cation efflux family protein
YP_739805.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4477 transcriptional regulatory protein CpxR
YP_739806.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4478 sensor protein CpxA
YP_739807.1	PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: son:SO4479 sigma-54 dependent transcriptional regulator
YP_739808.1	PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase
YP_739809.1	PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hch:HCH_02025 short-chain alcohol dehydrogenase-like protein
YP_739810.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: mfa:Mfla_2592 transcriptional regulator, LysR family
YP_739811.1	KEGG: son:SO4481 hypothetical protein
YP_739812.1	KEGG: son:SO4482 hypothetical protein
YP_739813.1	PFAM: cytochrome B561; KEGG: son:SO4483 cytochrome b, putative
YP_739814.1	KEGG: son:SO4484 cytochrome c-type protein Shp
YP_739815.1	KEGG: son:SO4485 diheme cytochrome c
YP_739816.1	PFAM: Propeptide, PepSY amd peptidase M4; KEGG: son:SO4486 hypothetical protein
YP_739817.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4487 DNA-binding response regulator
YP_739818.1	PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: son:SO4488 sensor histidine kinase
YP_739819.1	KEGG: son:SO4492 hypothetical protein
YP_739820.1	TIGRFAM: DNA binding domain, excisionase family; KEGG: son:SO4502 hypothetical protein
YP_739821.1	PFAM: formate dehydrogenase, subunit FdhD; KEGG: son:SO4503 formate dehydrogenase accessory protein FdhD, putative
YP_739822.1	KEGG: son:SO4504 hypothetical protein
YP_739823.1	KEGG: son:SO4505 hypothetical protein
YP_739824.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4506 iron-sulfur cluster-binding protein
YP_739825.1	PFAM: cytoplasmic chaperone TorD family protein; KEGG: son:SO4507 TorA specific chaperone, putative
YP_739826.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: son:SO4508 hypothetical protein
YP_739827.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4509 formate dehydrogenase, alpha subunit
YP_739828.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4510 formate dehydrogenase, iron-sulfur subunit
YP_739829.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO4511 formate dehydrogenase, C subunit, putative
YP_739830.1	TIGRFAM: Twin-arginine translocation pathway signal; KEGG: son:SO4512 hypothetical protein
YP_739831.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4513 formate dehydrogenase, alpha subunit
YP_739832.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4514 formate dehydrogenase, iron-sulfur subunit
YP_739833.1	TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: son:SO4515 formate dehydrogenase, C subunit, putative
YP_739834.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4516 ferric vibriobactin receptor
YP_739835.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRB0028 hypothetical methyl-accepting chemotaxisprotein
YP_739836.1	PFAM: Bile acid:sodium symporter; KEGG: son:SO4519 sodium-dependent transporter
YP_739837.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_739838.1	KEGG: son:SO4521 hypothetical protein
YP_739839.1	PFAM: Patatin; KEGG: son:SO4525 hypothetical protein
YP_739840.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO4525.1 hypothetical transcriptional regulator, LysR family
YP_739841.1	PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4527 integral membrane domain protein
YP_739842.1	TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO4529 RNA methyltransferase, TrmH family, group 2
YP_739843.1	KEGG: son:SO1510 hypothetical protein
YP_739844.1	PFAM: regulatory protein, TetR; KEGG: sde:Sde_0068 putative transcriptional regulator, TetR family
YP_739845.1	PFAM: protein of unknown function DUF1123; KEGG: cvi:CV0269 hypothetical protein
YP_739846.1	KEGG: son:SO4535 hypothetical protein
YP_739847.1	PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: son:SO4537 peptidase, putative
YP_739848.1	PFAM: peptidase M16 domain protein; KEGG: sdn:Sden_3485 peptidase M16-like protein
YP_739849.1	PFAM: peptidase M16 domain protein; KEGG: son:SO4537.2 hypothetical Zn-dependent peptidase
YP_739850.1	KEGG: sdn:Sden_3487 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein
YP_739851.1	KEGG: rfr:Rfer_3046 transcriptional factor
YP_739852.1	TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase; Tubulin/FtsZ domain protein; KEGG: noc:Noc_2855 cell division protein FtsZ
YP_739853.1	PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4550 methyltransferase domain protein
YP_739854.1	KEGG: son:SO4551 hypothetical protein
YP_739855.1	KEGG: son:SO4552 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein
YP_739856.1	PFAM: DTW domain containing protein; KEGG: son:SO4554 hypothetical protein
YP_739857.1	TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4555 drug resistance transporter, Bcr/CflA family protein
YP_739858.1	PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO4556 transcriptional regulator, LysR family
YP_739859.1	PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: son:SO4557 methyl-accepting chemotaxis protein
YP_739860.1	KEGG: son:SO4558 hypothetical protein
YP_739861.1	PFAM: Sel1 domain protein repeat-containing protein; KEGG: son:SO4559 hypothetical protein
YP_739862.1	KEGG: son:SO4560 hypothetical protein
YP_739863.1	KEGG: son:SO4561 hypothetical protein
YP_739864.1	PFAM: protein of unknown function DUF1332; KEGG: son:SO4562 hypothetical protein
YP_739865.1	KEGG: son:SO4563 hypothetical protein
YP_739866.1	TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: son:SO4564 TonB2 protein, putative
YP_739867.1	uncharacterized member of the APC superfamily of amino acid transporters; unknown function
YP_739868.1	PFAM: regulatory protein, AsnC/Lrp family; KEGG: son:SO4567 transcriptional regulator, AsnC family
YP_739869.1	PFAM: Polysulphide reductase, NrfD; KEGG: son:SO4568 formate-dependent nitrite reductase, nrfD protein
YP_739870.1	TIGRFAM: Twin-arginine translocation pathway signal; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: vvy:VV1252 formate-dependent nitrite reductase complex, Fe-S protein
YP_739871.1	KEGG: sfx:S3598 formate-dependent nitrite reductase
YP_739873.1	PFAM: regulatory protein, LysR; KEGG: son:SO4571 transcriptional regulator, LysR family
YP_739874.1	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis
YP_739875.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO4574 hydrolase, alpha/beta fold family
YP_739876.1	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate
YP_739877.1	TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO4576 O-succinylbenzoic acid--CoA ligase
YP_739878.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_739879.1	PFAM: protein of unknown function DUF214; KEGG: son:SO4584 cell division ABC transporter, permease protein FtsX
YP_739880.1	KEGG: son:SO4585 cell division ABC transporter, ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase
YP_739881.1	KEGG: son:SO4586 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; SMART: AAA ATPase
YP_739882.1	TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: son:SO4587 putative methylase
YP_739883.1	PFAM: protein of unknown function DUF1145; KEGG: son:SO4588 hypothetical protein
YP_739884.1	PFAM: NapC/NirT cytochrome c domain protein; KEGG: son:SO4591 tetraheme cytochrome c
YP_739885.1	KEGG: son:SO4592 hypothetical protein
YP_739886.1	KEGG: son:SO4593 hypothetical protein
YP_739887.1	KEGG: son:SO4594 hypothetical protein
YP_739888.1	KEGG: son:SO4596 copper-transporting ATPase domain protein
YP_739889.1	TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SO4597 heavy metal efflux system protein, putative
YP_739890.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: son:SOA0153 heavy metal efflux pump, CzcA family
YP_739891.1	PFAM: ribonuclease T2; KEGG: son:SO4599 ribonuclease, T2 family
YP_739892.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: vvy:VV1004 methyl-accepting chemotaxis protein
YP_739893.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO4600 antigen, putative
YP_739894.1	TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: son:SO4601 tryptophan-specific transport protein
YP_739895.1	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA
YP_739896.1	Represses a number of genes involved in the response to DNA damage
YP_739897.1	KEGG: son:SO4604 hypothetical protein
YP_739898.1	PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; KEGG: son:SO4606 cytochrome c oxidase, subunit II
YP_739899.1	PFAM: cytochrome c oxidase, subunit I; KEGG: son:SO4607 cytochrome c oxidase, subunit I
YP_739900.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_739901.1	PFAM: cytochrome c oxidase, subunit III; KEGG: son:SO4609 cytochrome c oxidase subunit III
YP_739902.1	KEGG: son:SO4610 hypothetical protein
YP_739903.1	KEGG: son:SO4611 hypothetical protein
YP_739904.1	KEGG: son:SO4612 hypothetical protein
YP_739905.1	PFAM: cytochrome oxidase assembly; KEGG: son:SO4613 cytochrome oxidase assembly protein, putative
YP_739906.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_739907.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: son:SO4615 SCO1/SenC family protein
YP_739908.1	PFAM: polysaccharide deacetylase; KEGG: son:SO4616 polysaccharide deacetylase family protein
YP_739909.1	TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO4617 DNA-damage-inducible protein F
YP_739910.1	KEGG: lic:LIC13455 hypothetical protein
YP_739914.1	cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source
YP_739915.1	KEGG: son:SO4625 competence protein ComF
YP_739916.1	TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: son:SO4626 bioH protein
YP_739917.1	KEGG: son:SO4627 hypothetical protein
YP_739918.1	PFAM: sulfatase; KEGG: son:SO4628 sulfatase
YP_739919.1	PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: son:SO4629 hypothetical protein
YP_739920.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO4631 transcription elongation factor GreB
YP_739921.1	PFAM: phage integrase family protein; KEGG: pol:Bpro_1705 phage integrase
YP_739922.1	PFAM: phage integrase family protein; KEGG: cps:CPS_0185 putative site-specific recombinase, phage integrase family
YP_739923.1	KEGG: aci:ACIAD2815 hypothetical protein
YP_739924.1	TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sdn:Sden_0240 transcription elongation factor GreB
YP_739925.1	PFAM: helicase domain protein; KEGG: vvu:VV13188 FOG: GGDEF domain
YP_739926.1	KEGG: vch:VC0177 hypothetical protein
YP_739927.1	PFAM: helix-turn-helix domain protein; KEGG: vvu:VV13190 putative transcriptional regulator
YP_739928.1	TIGRFAM: conserved hypothetical protein; KEGG: yps:YPTB2263 hypothetical protein
YP_739929.1	KEGG: vvy:VVA1413 iSSod13, transposase
YP_739932.1	TIGRFAM: YD repeat protein; PFAM: Fibronectin, type III domain protein; YD repeat-containing protein; KEGG: sde:Sde_3020 hypothetical protein
YP_739933.1	PFAM: phage integrase family protein; KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family
YP_739934.1	KEGG: chy:CHY_0826 hypothetical protein
YP_739935.1	PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO4631 transcription elongation factor GreB
YP_739936.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_739937.1	membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR
YP_739938.1	PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4635 methyl-accepting chemotaxis protein
YP_739939.1	PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO4640 antioxidant, AhpC/Tsa family
YP_739940.1	KEGG: son:SO4645 hypothetical protein
YP_739941.1	PFAM: Propeptide, PepSY amd peptidase M4; KEGG: son:SO4646 hypothetical protein
YP_739942.1	PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4647 DNA-binding response regulator
YP_739943.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4648 sensor histidine kinase
YP_739944.1	KEGG: son:SO4649 hypothetical protein
YP_739945.1	KEGG: son:SO4656 hypothetical protein
YP_739946.1	KEGG: son:SO4656.2 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein
YP_739948.1	TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase, subunit II; COX aromatic rich domain protein; KEGG: pha:PSHAa2231 ubiquinol oxidase polypeptide II (cytochrome o subunit 2) (oxidase BO(3) subunit 2) (cytochrome o ubiquinol oxidase subunit 2) (ubiquinol oxidase chain B)
YP_739949.1	PFAM: cytochrome c oxidase, subunit I; KEGG: pha:PSHAa2230 ubiquinol oxidase polypeptide I (cytochrome o subunit 1) (oxidase BO(3) subunit 1) (cytochrome o ubiquinol oxidase subunit 1) (ubiquinol oxidase chain A)
YP_739950.1	PFAM: cytochrome c oxidase, subunit III; KEGG: pha:PSHAa2229 cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C)
YP_739951.1	PFAM: cytochrome C oxidase subunit IV; KEGG: pha:PSHAa2228 cytochrome o ubiquinol oxidase protein (ubiquinol oxidase chain D)
YP_739952.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_739955.1	PFAM: protein of unknown function DUF548; KEGG: sdn:Sden_3610 protein of unknown function DUF548
YP_739956.1	PFAM: protein of unknown function DUF519; KEGG: son:SO4659 hypothetical protein
YP_739957.1	PFAM: Lytic transglycosylase, catalytic; KEGG: son:SO4660 transglycosylase SLT domain protein
YP_739958.1	KEGG: son:SO4661 hypothetical protein
YP_739959.1	PFAM: LemA family protein; KEGG: son:SO4662 lemA protein
YP_739960.1	PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; KEGG: ppr:PBPRA0142 putative efflux pump component MtrF
YP_739963.1	TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: son:SO4692 AcrB/AcrD/AcrF family protein
YP_739964.1	TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO4693 multidrug resistance protein, AcrA/AcrE family
YP_739965.1	TIGRFAM: conserved hypothetical protein; KEGG: son:SO4694 hypothetical protein
YP_739966.1	KEGG: son:SO4696 hypothetical 3-methyladenine DNA glycosylase
YP_739967.1	PFAM: Glutathione S-transferase, N-terminal domain protein; KEGG: son:SO4697 glutathione S-transferase
YP_739968.1	KEGG: son:SO4698 hypothetical protein
YP_739969.1	PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO4699 oligopeptidase A
YP_739970.1	KEGG: son:SO4700 hypothetical protein
YP_739971.1	KEGG: son:SO4701 hypothetical protein
YP_739972.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_739973.1	KEGG: vfi:VFA0898 hypothetical protein
YP_739974.1	TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: sdn:Sden_0149 sodium/proline symporter
YP_739975.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_739976.1	TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: sdn:Sden_0151 gamma-glutamyl phosphate reductase
YP_739977.1	PFAM: SH3, type 3 domain protein
YP_739978.1	PFAM: helix-turn-helix domain protein; KEGG: son:SO4705 transcriptional regulator, putative
YP_739979.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_739980.1	PFAM: conserved hypothetical protein 698; KEGG: son:SO4708 hypothetical protein
YP_739981.1	KEGG: son:SO4709 hypothetical protein
YP_739982.1	PFAM: regulatory protein, LuxR; KEGG: cps:CPS_1945 hypothetical protein
YP_739983.1	KEGG: ilo:IL0061 outer membrane protein
YP_739984.1	KEGG: cps:CPS_1944 hypothetical protein
YP_739985.1	TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: cps:CPS_1943 cation efflux system protein CzcA
YP_739986.1	KEGG: cps:CPS_1942 hypothetical protein
YP_739987.1	PFAM: Paraquat-inducible protein A; KEGG: son:SO4710 hypothetical protein
YP_739988.1	PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO4711 HD domain protein
YP_739990.1	KEGG: pca:Pcar_2393 hypothetical protein
YP_739991.1	KEGG: pca:Pcar_2394 hypothetical protein
YP_739992.1	PFAM: cobalt transport protein; KEGG: pca:Pcar_2395 hypothetical protein
YP_739993.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4712 ABC transporter, ATP-binding protein, putative
YP_739994.1	PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: nha:Nham_3500 TonB-dependent receptor
YP_739995.1	TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: son:SO4713 menaquinone-specific isochorismate synthase, putative
YP_739996.1	KEGG: son:SO4714 hypothetical protein
YP_739997.1	TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: son:SO4715 hypothetical protein
YP_739998.1	KEGG: son:SO4716 acetyltransferase, GNAT family
YP_739999.1	PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4717 sensor histidine kinase
YP_740000.1	PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO4718 sigma-54 dependent response regulator
YP_740001.1	PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO4719 putative sulfate transport system substrate-binding protein
YP_740002.1	PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4720 ABC transporter, permease protein
YP_740003.1	PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO4721 ABC transporter, ATP-binding protein
YP_740004.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: son:SO4722 molybdopterin-guanine dinucleotide biosynthesis protein
YP_740005.1	TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin binding domain; molybdopterin-guanine dinucleotide biosynthesis MobB region; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: son:SO4723 molybdopterin biosynthesis MoeA protein, putative
YP_740006.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_740007.1	KEGG: son:SO4725 hypothetical protein
YP_740008.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_740009.1	PFAM: glycosyl transferase, family 39; KEGG: son:SO4690 hypothetical protein
YP_740010.1	KEGG: son:SO4689 hypothetical protein
YP_740011.1	PFAM: glycosyl transferase, family 2; KEGG: son:SO4688 glycosyl transferase, group 2 family protein
YP_740012.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: son:SO4687 UDP-glucose 6-dehydrogenase
YP_740013.1	PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal; KEGG: son:SO4686 NAD dependent epimerase/dehydratase family protein
YP_740014.1	PFAM: Integrase, catalytic region; KEGG: pcr:Pcryo_0715 Integrase, catalytic region
YP_740015.1	KEGG: dde:Dde_2987 transposase
YP_740016.1	KEGG: son:SO4685 hypothetical protein
YP_740017.1	Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA
YP_740018.1	PFAM: glycosyl transferase, group 1; KEGG: son:SO4682 glycosyl transferase, group 1 family protein
YP_740019.1	PFAM: glycosyl transferase, group 1; KEGG: son:SO4681 glycosyl transferase, group 1 family protein
YP_740020.1	PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: son:SO4680 hypothetical protein
YP_740021.1	PFAM: glycosyl transferase, group 1; KEGG: son:SO4679 glycosyl transferase, group 1 family protein
YP_740022.1	PFAM: glycosyl transferase, family 9; KEGG: son:SO4678 heptosyl transferase, glycosyltransferase family 9 protein
YP_740023.1	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position
YP_740024.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: son:SO4676 3-deoxy-D-manno-octulosonic-acid (KDO) transferase
YP_740025.1	PFAM: regulatory protein, TetR; KEGG: son:SO4675 transcriptional regulator, TetR family
YP_740026.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
YP_740027.1	converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism
YP_740028.1	PFAM: Rhodanese domain protein; KEGG: son:SO4672 glpE protein
YP_740029.1	PFAM: Rhomboid family protein; KEGG: son:SO4671 glpG protein
YP_740030.1	PFAM: ThiJ/PfpI domain protein; KEGG: son:SO4670 enhancing lycopene biosynthesis protein
YP_740031.1	KEGG: son:SO4669 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2
YP_740032.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_740033.1	PFAM: cytochrome c, class I; KEGG: son:SO4666 cytochrome c
YP_740034.1	KEGG: son:SO4727 hypothetical protein
YP_740035.1	PFAM: protein of unknown function DUF414; KEGG: son:SO4728 hypothetical protein
YP_740036.1	KEGG: son:SO4729 hypothetical protein
YP_740037.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_740038.1	catalyzes the formation of inosine from adenosine
YP_740039.1	PFAM: protein of unknown function DUF885; KEGG: son:SO4732 hypothetical protein
YP_740040.1	PFAM: alpha/beta hydrolase fold; KEGG: son:SO4733 lysophospholipase L2
YP_740041.1	KEGG: son:SO4734 sensory box protein; TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein
YP_740042.1	PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4737 iron-sulfur cluster-binding protein
YP_740043.1	KEGG: son:SO4738 hypothetical protein
YP_740044.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
YP_740045.1	KEGG: son:SO4740 hypothetical protein
YP_740046.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_740047.1	PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: son:SO4742 transcriptional regulator, DeoR family
YP_740048.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4743 TonB-dependent receptor, putative
YP_740049.1	KEGG: son:SO4745 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase
YP_740050.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_740051.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_740052.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_740053.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_740054.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_740055.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_740056.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_740057.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_740058.1	PFAM: ATP synthase I chain; KEGG: son:SO4754 ATP synthase protein I
YP_740059.1	TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: son:SO4755 ParB family protein
YP_740060.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO4756 ParA family protein
YP_740061.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_740062.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs
YP_740063.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_740064.1	TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; KEGG: son:SO0002 proton/peptide symporter family protein
YP_740065.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_740066.1	PFAM: 60 kDa inner membrane insertion protein; KEGG: son:SO0004 inner membrane protein, 60 kDa
YP_740067.1	PFAM: protein of unknown function DUF37; KEGG: son:SO0005 conserved hypothetical protein TIGR00278
YP_740068.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_740069.1	in Escherichia coli transcription of this gene is enhanced by polyamines