-- dump date   	20140620_063026
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_925883.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_925884.1	KEGG: vpa:VP2298 hypothetical protein
YP_925885.1	KEGG: sdn:Sden_3766 carboxylesterase
YP_925886.1	KEGG: sdn:Sden_3767 alcohol dehydrogenase, zinc-binding
YP_925887.1	KEGG: sdn:Sden_3768 LysR, substrate-binding
YP_925888.1	KEGG: son:SO0302 hypothetical protein
YP_925889.1	KEGG: mxa:MXAN_3389 oxidoreductase, FAD/FMN-binding
YP_925890.1	in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE
YP_925891.1	KEGG: son:SO0004 inner membrane protein, 60 kDa
YP_925892.1	KEGG: son:SO0005 conserved hypothetical protein TIGR00278
YP_925893.1	protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates
YP_925894.1	in Escherichia coli transcription of this gene is enhanced by polyamines
YP_925895.1	binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.
YP_925896.1	KEGG: son:SO0009 DNA polymerase III, beta subunit
YP_925897.1	Required for DNA replication; binds preferentially to single-stranded, linear DNA
YP_925898.1	KEGG: son:SO0011 DNA gyrase subunit B
YP_925899.1	KEGG: son:SO0464 MutT/nudix family protein
YP_925900.1	KEGG: pha:PSHAa1441 pyrrolidone-carboxylate peptidase (5-oxoprolyl-peptidase) (pyroglutamyl-peptidase I) (PGP-I) (pyrase)
YP_925901.1	KEGG: rso:RSc2167 probable transmembrane protein
YP_925902.1	KEGG: bur:Bcep18194_B2013 protein of unknown function DUF969
YP_925903.1	KEGG: hit:NTHI2036 hypothetical protein
YP_925904.1	KEGG: sbo:SBO_0571 putative carboxylase
YP_925905.1	KEGG: bxe:Bxe_A0195 conserved hypothetical protein 370
YP_925906.1	KEGG: son:SO0013 hypothetical protein
YP_925907.1	glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_925908.1	glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA
YP_925909.1	KEGG: son:SO0016 DNA-3-methyladenine glycosidase I
YP_925910.1	KEGG: son:SO0017 hypothetical amidohydrolase
YP_925911.1	KEGG: sdn:Sden_0013 SirA-like protein
YP_925912.1	KEGG: son:SO4466 methyl-accepting chemotaxis protein
YP_925913.1	FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_925914.1	includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids
YP_925915.1	catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters
YP_925916.1	KEGG: son:SO0023 conserved hypothetical protein TIGR00257
YP_925917.1	KEGG: shm:Shewmr7_0019 potassium uptake protein, TrkH family
YP_925918.1	KEGG: shm:Shewmr7_0020 protoporphyrinogen oxidase
YP_925919.1	KEGG: son:SO0026 transcriptional regulator, ArsR family
YP_925920.1	KEGG: son:SO0027 protoporphyrinogen oxidase
YP_925921.1	KEGG: son:SO0028 potassium uptake protein TrkH
YP_925922.1	involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain
YP_925923.1	KEGG: sdn:Sden_0022 sun protein
YP_925924.1	KEGG: son:SO0031 methionyl-tRNA formyltransferase
YP_925925.1	cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+)
YP_925926.1	KEGG: son:SO0033 LysM domain protein
YP_925927.1	KEGG: son:SO0034 DNA processing protein DprA, putative
YP_925928.1	KEGG: shm:Shewmr7_0030 protein of unknown function DUF494
YP_925929.1	KEGG: cps:CPS_2237 microbial collagenase
YP_925930.1	KEGG: son:SO0036 topoisomerase DNA-binding C4 zinc finger domain protein
YP_925931.1	KEGG: sdn:Sden_0029 SUA5/YciO/YrdC-like protein
YP_925932.1	catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis
YP_925933.1	KEGG: sdn:Sden_0031 globin
YP_925934.1	KEGG: sdn:Sden_0034 shikimate 5-dehydrogenase
YP_925935.1	KEGG: son:SO0041 hypothetical protein
YP_925936.1	KEGG: son:SO0042 carbonic anhydrase, family 3
YP_925937.1	KEGG: son:SO0044 hypothetical protein
YP_925938.1	KEGG: son:SO0045 Rrf2 family protein
YP_925939.1	KEGG: shm:Shewmr7_0040 protein of unknown function DUF610, YibQ
YP_925940.1	KEGG: son:SO0047 carboxyl-terminal protease, putative
YP_925941.1	KEGG: son:SO0048 peptidase, M23/M37 family
YP_925942.1	catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
YP_925943.1	KEGG: sdn:Sden_3697 rhodanese-like protein
YP_925944.1	molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA
YP_925945.1	catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate
YP_925946.1	KEGG: son:SO0054 conserved hypothetical protein TIGR00275
YP_925947.1	KEGG: tdn:Tmden_0218 diguanylate cyclase (GGDEF domain protein)
YP_925948.1	KEGG: sde:Sde_0403 ABC-type nitrate/sulfonate/bicarbonate transport system protein
YP_925949.1	KEGG: hch:HCH_00809 signal transduction histidine kinase
YP_925950.1	forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis
YP_925951.1	KEGG: son:SO0061 lipoprotein, NLP/P60 family
YP_925952.1	KEGG: mlo:mlr8324 hypothetical protein
YP_925953.1	KEGG: son:SO0079 hypothetical protein
YP_925954.1	specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7
YP_925955.1	KEGG: son:SO0080 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_925956.1	KEGG: son:SO0084 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein
YP_925957.1	KEGG: sdn:Sden_0079 hypothetical protein
YP_925958.1	KEGG: sdn:Sden_3013 transcription activator, effector binding
YP_925959.1	KEGG: ppr:PBPRA1786 hypothetical transcriptional regulator
YP_925960.1	KEGG: ccr:CC3723 prolyl oligopeptidase family protein
YP_925961.1	KEGG: bur:Bcep18194_A4870 putative esterase
YP_925962.1	catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway
YP_925963.1	KEGG: son:SO0096 histidine utilization repressor
YP_925964.1	KEGG: sdn:Sden_3670 GGDEF domain protein
YP_925965.1	KEGG: she:Shewmr4_3914 alpha/beta hydrolase fold
YP_925966.1	KEGG: son:SO4732 hypothetical protein
YP_925967.1	catalyzes the formation of inosine from adenosine
YP_925968.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_925969.1	KEGG: pat:Patl_4277 amidohydrolase
YP_925970.1	KEGG: son:SO4729 hypothetical protein
YP_925971.1	KEGG: son:SO4728 hypothetical protein
YP_925972.1	KEGG: son:SO4727 hypothetical protein
YP_925973.1	KEGG: sdn:Sden_3622 cytochrome c, class I
YP_925974.1	binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential
YP_925975.1	KEGG: son:SO4669 DNA polymerase I
YP_925976.1	KEGG: son:SO4670 enhancing lycopene biosynthesis protein
YP_925977.1	KEGG: son:SO4671 glpG protein
YP_925978.1	KEGG: son:SO4672 glpE protein
YP_925979.1	converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism
YP_925980.1	catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine
YP_925981.1	KEGG: son:SO4675 transcriptional regulator, TetR family
YP_925982.1	KEGG: son:SO4676 3-deoxy-D-manno-octulosonic-acid (KDO) transferase
YP_925983.1	catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position
YP_925984.1	KEGG: shm:Shewmr7_3988 glycosyl transferase, family 9
YP_925985.1	KEGG: pha:PSHAa2321 hypothetical protein
YP_925986.1	KEGG: son:SO4679 glycosyl transferase, group 1 family protein
YP_925987.1	KEGG: vch:VC0229 hypothetical protein
YP_925988.1	KEGG: vch:VC0230 hypothetical protein
YP_925989.1	KEGG: vch:VC0231 hypothetical protein
YP_925990.1	KEGG: vch:VC0232 hypothetical protein
YP_925991.1	KEGG: son:SO4681 glycosyl transferase, group 1 family protein
YP_925992.1	KEGG: son:SO4684 phosphopantetheine adenylyltransferase
YP_925993.1	KEGG: sdn:Sden_0209 hypothetical protein
YP_925994.1	KEGG: son:SO4688 glycosyl transferase, group 2 family protein
YP_925995.1	KEGG: son:SO4689 hypothetical protein
YP_925996.1	KEGG: son:SO4690 hypothetical protein
YP_925997.1	KEGG: bce:BC0671 sphingomyelin phosphodiesterase
YP_925998.1	KEGG: rfr:Rfer_3745 protein of unknown function DUF6, transmembrane
YP_925999.1	Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases
YP_926000.1	KEGG: son:SO4725 hypothetical protein
YP_926001.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_926002.1	KEGG: son:SO4723 molybdopterin biosynthesis MoeA protein, putative
YP_926003.1	KEGG: son:SO4722 molybdopterin-guanine dinucleotide biosynthesis protein
YP_926004.1	KEGG: son:SO4721 ABC transporter, ATP-binding protein
YP_926005.1	KEGG: son:SO4720 ABC transporter, permease protein
YP_926006.1	KEGG: son:SO4719 putative sulfate transport system substrate-binding protein
YP_926007.1	KEGG: son:SO4718 sigma-54 dependent response regulator
YP_926008.1	KEGG: son:SO4717 sensor histidine kinase
YP_926009.1	KEGG: son:SO4716 acetyltransferase, GNAT family
YP_926010.1	KEGG: son:SO4715 hypothetical protein
YP_926011.1	KEGG: son:SO4714 hypothetical protein
YP_926012.1	KEGG: son:SO4713 menaquinone-specific isochorismate synthase, putative
YP_926013.1	KEGG: nha:Nham_3500 TonB-dependent receptor
YP_926014.1	KEGG: shm:Shewmr7_3959 ABC transporter related
YP_926015.1	KEGG: pca:Pcar_2395 hypothetical protein
YP_926016.1	KEGG: pca:Pcar_2394 hypothetical protein
YP_926017.1	KEGG: pca:Pcar_2393 hypothetical protein
YP_926018.1	KEGG: son:SO4711 HD domain protein
YP_926019.1	ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase
YP_926020.1	KEGG: son:SO0138 molybdopterin biosynthesis MoeA protein
YP_926021.1	KEGG: sdn:Sden_3429 secretion protein HlyD
YP_926022.1	KEGG: sdn:Sden_3430 acriflavin resistance protein
YP_926023.1	KEGG: son:SO0139 ferritin
YP_926024.1	KEGG: son:SO0141 sensory box protein
YP_926025.1	KEGG: son:SO0142 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_926026.1	KEGG: son:SO0144 protease II
YP_926027.1	KEGG: son:SO0145 hypothetical URI domain endonuclease
YP_926028.1	KEGG: cps:CPS_1865 DNA-binding response regulator
YP_926029.1	KEGG: cps:CPS_1866 sensor histidine kinase
YP_926030.1	KEGG: sde:Sde_1770 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family-like
YP_926031.1	KEGG: sdn:Sden_0116 hypothetical protein
YP_926032.1	KEGG: son:SO0151 hypothetical SAM-dependent methyltransferase
YP_926033.1	KEGG: son:SO4539 serine protease, subtilase family
YP_926034.1	KEGG: pha:PSHAa0851 MltA-interacting MipA ; signal peptide
YP_926035.1	KEGG: cps:CPS_1424 hypothetical protein
YP_926036.1	KEGG: sde:Sde_0550 two component transcriptional regulator, winged helix family
YP_926037.1	KEGG: pae:PA1158 probable two-component sensor
YP_926038.1	KEGG: cpf:CPF_1301 glycosyl hydrolase, family 31/fibronectin type III domain protein
YP_926039.1	KEGG: mxa:MXAN_7313 metallo-beta-lactamase family protein
YP_926040.1	KEGG: mxa:MXAN_7312 transcriptional regulator, LysR family
YP_926041.1	KEGG: cvi:CV4280 hypothetical protein
YP_926042.1	KEGG: cps:CPS_3206 glutamate synthase domain protein
YP_926043.1	KEGG: son:SO0152 hypothetical carboxypeptidase
YP_926044.1	KEGG: sdn:Sden_2422 biopolymer transport protein ExbD/TolR
YP_926045.1	KEGG: hch:HCH_05473 hypothetical protein
YP_926046.1	PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP
YP_926047.1	becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers
YP_926048.1	KEGG: son:SO0164 heat shock protein 15
YP_926049.1	KEGG: son:SO0165 general secretion pathway protein C
YP_926050.1	KEGG: sdn:Sden_0121 type II and III secretion system protein
YP_926051.1	KEGG: son:SO0167 general secretion pathway protein E
YP_926052.1	KEGG: son:SO0168 general secretion pathway protein F
YP_926053.1	KEGG: son:SO0169 general secretion pathway protein G
YP_926054.1	KEGG: son:SO0170 general secretion pathway protein H
YP_926055.1	KEGG: son:SO0171 general secretion pathway protein I
YP_926056.1	KEGG: son:SO0172 general secretion pathway protein J
YP_926057.1	KEGG: son:SO0173 general secretion pathway protein K
YP_926058.1	KEGG: son:SO0174 general secretion pathway protein L
YP_926059.1	KEGG: son:SO0175 general secretion pathway protein M
YP_926060.1	KEGG: son:SO0176 general secretion pathway protein N
YP_926063.1	KEGG: son:SO0177 HAD-superfamily hydrolase, subfamily IA, variant 3 protein family
YP_926064.1	ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose
YP_926065.1	KEGG: son:SO0191 cysQ protein
YP_926066.1	KEGG: cvi:CV0908 probable acetyltransferase
YP_926067.1	KEGG: son:SO0193 transcriptional regulator, TetR family
YP_926068.1	KEGG: son:SO0194 acyltransferase family protein
YP_926069.1	KEGG: sdn:Sden_0226 hypothetical protein
YP_926070.1	catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
YP_926071.1	catalyzes the formation of selenophosphate from selenide and ATP
YP_926072.1	KEGG: sdn:Sden_0229 stearoyl-CoA 9-desaturase
YP_926073.1	negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis
YP_926074.1	catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs
YP_926075.1	converts L-glutamate to D-glutamate, a component of peptidoglycan
YP_926076.1	KEGG: sdn:Sden_0233 RNA-binding protein
YP_926077.1	catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis
YP_926078.1	catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon
YP_926079.1	catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis
YP_926080.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_926081.1	forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force
YP_926082.1	KEGG: son:SO0219 transcription antitermination protein NusG
YP_926083.1	binds directly to 23S ribosomal RNA
YP_926084.1	KEGG: son:SO0221 50S ribosomal protein L1
YP_926085.1	binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit
YP_926086.1	present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors
YP_926087.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme
YP_926088.1	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter
YP_926089.1	interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance
YP_926090.1	binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit
YP_926091.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_926092.1	EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu
YP_926093.1	NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex
YP_926094.1	binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin
YP_926095.1	L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA
YP_926096.1	binds third domain of 23S rRNA and protein L29; part of exit tunnel
YP_926097.1	one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation
YP_926098.1	protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
YP_926099.1	binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center
YP_926100.1	forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation
YP_926101.1	located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e
YP_926102.1	one of the stabilizing components for the large ribosomal subunit
YP_926103.1	KEGG: son:SO0240 30S ribosomal subunit protein S17
YP_926104.1	binds to the 23S rRNA between the centers for peptidyl transferase and GTPase
YP_926105.1	assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel
YP_926106.1	part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13
YP_926107.1	located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif
YP_926108.1	binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
YP_926109.1	ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance
YP_926110.1	binds 5S rRNA along with protein L5 and L25
YP_926111.1	located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance
YP_926112.1	KEGG: son:SO0249 50S ribosomal protein L30
YP_926113.1	late assembly protein
YP_926114.1	forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase
YP_926115.1	smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif
YP_926116.1	located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA
YP_926117.1	located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3
YP_926118.1	primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination
YP_926119.1	catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme
YP_926120.1	is a component of the macrolide binding site in the peptidyl transferase center
YP_926121.1	KEGG: vch:VCA0212 hypothetical protein
YP_926122.1	CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane
YP_926123.1	KEGG: son:SO0260 heme exporter protein CcmD
YP_926124.1	KEGG: son:SO0261 heme exporter protein CcmC
YP_926125.1	KEGG: son:SO0262 heme exporter protein CcmB
YP_926126.1	ATP-binding protein; required for proper cytochrome c maturation
YP_926127.1	KEGG: son:SO0264 cytochrome c
YP_926128.1	KEGG: son:SO0265 cytochrome c-type biogenesis protein CcmH
YP_926129.1	KEGG: son:SO0266 cytochrome c-type biogenesis protein CcmF
YP_926130.1	KEGG: son:SO0267 thiol:disulfide interchange protein DsbE
YP_926131.1	KEGG: son:SO0268 cytochrome c-type biogenesis protein CcmH
YP_926132.1	KEGG: son:SO0269 thioredoxin, putative
YP_926133.1	KEGG: son:SO0272 competence/damage-inducible protein CinA
YP_926134.1	KEGG: son:SO0273 hypothetical protein
YP_926135.1	catalyzes the formation of oxaloacetate from phosphoenolpyruvate
YP_926136.1	catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis
YP_926137.1	catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate
YP_926138.1	catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate
YP_926139.1	catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation
YP_926140.1	catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming
YP_926141.1	catalyzes the formation of arginine from (N-L-arginino)succinate
YP_926142.1	KEGG: she:Shewmr4_3617 AMP-dependent synthetase and ligase
YP_926143.1	specifically modifies tRNA at position G18
YP_926144.1	KEGG: sdn:Sden_3436 YjgF-like protein
YP_926145.1	KEGG: son:SO0359 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
YP_926146.1	promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits
YP_926147.1	Essential for recycling GMP and indirectly, cGMP
YP_926148.1	KEGG: son:SO0362 hypothetical protein
YP_926149.1	KEGG: son:SO0363 hypothetical protein
YP_926150.1	KEGG: son:SO0364 hypothetical protein
YP_926151.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_926152.1	KEGG: son:SO0365 hypothetical permeases of the major facilitator superfamily
YP_926153.1	KEGG: vfi:VF1123 hypothetical protein
YP_926154.1	KEGG: son:SO0366 hypothetical protein
YP_926155.1	KEGG: vpa:VPA0175 transcriptional regulator, LysR family
YP_926156.1	KEGG: sdn:Sden_2365 glyoxalase/bleomycin resistance protein/dioxygenase
YP_926157.1	KEGG: vvy:VV0561 RNA polymerase sigma factor RpoD
YP_926158.1	KEGG: rfr:Rfer_3071 hypothetical protein
YP_926159.1	KEGG: rfr:Rfer_3072 endonuclease
YP_926160.1	KEGG: rfr:Rfer_3073 hypothetical protein
YP_926161.1	KEGG: rfr:Rfer_3074 hypothetical protein
YP_926162.1	KEGG: eba:ebA6339 modification methylase (cytosine-specific methyltransferase
YP_926163.1	KEGG: ret:RHE_PF00110 probable DNA mismatch endonuclease protein
YP_926164.1	KEGG: pha:PSHAa0301 hypothetical protein
YP_926165.1	KEGG: noc:Noc_2711 sodium/alanine symporter
YP_926166.1	manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily
YP_926167.1	KEGG: pat:Patl_1940 TonB-dependent receptor
YP_926168.1	KEGG: pat:Patl_1941 alpha-1,6-glucosidases, pullulanase-type
YP_926169.1	KEGG: pat:Patl_0116 putative alpha-1,2-mannosidase
YP_926170.1	KEGG: pat:Patl_0117 putative alpha-1,2-mannosidase
YP_926171.1	KEGG: pat:Patl_0118 N-acylglucosamine 2-epimerase
YP_926172.1	KEGG: cps:CPS_2648 carbohydrate kinase, PfkB family
YP_926173.1	KEGG: pat:Patl_0119 glucose/galactose transporter
YP_926174.1	KEGG: pat:Patl_0120 putative alpha-1,2-mannosidase
YP_926175.1	KEGG: pat:Patl_0121 transcriptional regulator, LacI family
YP_926176.1	KEGG: pat:Patl_0122 TonB-dependent receptor
YP_926177.1	KEGG: pat:Patl_0123 coagulation factor 5/8 type-like
YP_926178.1	KEGG: bth:BT3862 endo-alpha-mannosidase
YP_926179.1	KEGG: pat:Patl_0124 ATPase, BadF/BadG/BcrA/BcrD type
YP_926180.1	KEGG: pat:Patl_0125 twin-arginine translocation pathway signal
YP_926181.1	KEGG: pat:Patl_0126 glycoside hydrolase, family 85
YP_926182.1	KEGG: pat:Patl_0127 CutC
YP_926183.1	KEGG: pat:Patl_0128 glycoside hydrolase family 2, sugar binding
YP_926184.1	KEGG: pat:Patl_0129 Na+/solute symporter
YP_926185.1	KEGG: pat:Patl_0130 putative alpha-1,2-mannosidase
YP_926186.1	KEGG: pha:PSHAa2108 hypothetical protein
YP_926187.1	KEGG: pha:PSHAa2108 hypothetical protein
YP_926189.1	KEGG: hch:HCH_00937 predicted phosphoesterases, related to the Icc protein
YP_926190.1	KEGG: rfe:RF_0935 hypothetical protein
YP_926191.1	KEGG: ana:all3160 hypothetical protein
YP_926192.1	KEGG: sdn:Sden_3234 protein of unknown function DUF159
YP_926193.1	KEGG: ddi:DDB0204614 hypothetical protein
YP_926194.1	KEGG: noc:Noc_0649 DNA topoisomerase I
YP_926196.1	KEGG: sdn:Sden_3234 protein of unknown function DUF159
YP_926197.1	KEGG: nha:Nham_0324 hypothetical protein
YP_926198.1	KEGG: pha:PSHAa2104 hypothetical protein
YP_926199.1	KEGG: sdn:Sden_0317 phage integrase
YP_926200.1	KEGG: son:SO4257 conserved hypothetical protein TIGR00255
YP_926201.1	RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs
YP_926202.1	involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_926203.1	involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer
YP_926204.1	KEGG: son:SO4252 prolyl oligopeptidase family protein
YP_926205.1	FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly
YP_926206.1	catalyzes the formation of dUMP from dUTP
YP_926207.1	KEGG: son:SO4249 DNA/pantothenate metabolism flavoprotein
YP_926208.1	Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase
YP_926209.1	required for 70S ribosome assembly
YP_926210.1	in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif
YP_926211.1	catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis
YP_926212.1	KEGG: son:SO4244 hypothetical protein
YP_926213.1	KEGG: son:SO4243 rarD protein
YP_926214.1	KEGG: son:SO4241 ATP-dependent DNA helicase RecQ
YP_926215.1	KEGG: sdn:Sden_0333 tetratricopeptide TPR_2
YP_926216.1	catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis
YP_926217.1	catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis
YP_926218.1	dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate
YP_926219.1	catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D
YP_926220.1	KEGG: sdn:Sden_0340 membrane protein involved in aromatic hydrocarbon degradation
YP_926221.1	KEGG: sdn:Sden_0341 hypothetical protein
YP_926222.1	KEGG: son:SO4230 glycerol kinase
YP_926223.1	KEGG: son:SO4229 hypothetical protein
YP_926224.1	KEGG: sdn:Sden_0344 ferredoxin
YP_926225.1	KEGG: sdn:Sden_0345 PepSY-associated TM helix
YP_926226.1	MraZ; UPF0040; crystal structure shows similarity to AbrB
YP_926227.1	KEGG: sdn:Sden_0347 methyltransferase
YP_926228.1	KEGG: son:SO4226 cell division protein FtsL
YP_926229.1	KEGG: son:SO4225 peptidoglycan synthetase FtsI
YP_926230.1	involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate
YP_926231.1	KEGG: son:SO4223 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase
YP_926232.1	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
YP_926233.1	UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation
YP_926234.1	KEGG: son:SO4220 cell division protein FtsW
YP_926235.1	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis
YP_926236.1	Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis
YP_926237.1	KEGG: sdn:Sden_0357 cell division protein FtsQ
YP_926238.1	KEGG: son:SO4216 cell division protein FtsA
YP_926239.1	GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function
YP_926240.1	zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis
YP_926241.1	KEGG: sdn:Sden_0361 hypothetical protein
YP_926242.1	KEGG: sdn:Sden_0362 peptidase M23B
YP_926243.1	functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins
YP_926244.1	KEGG: sdn:Sden_3395 mutator MutT protein
YP_926245.1	KEGG: son:SO0411 hypothetical protein
YP_926246.1	KEGG: son:SO0412 hypothetical protein
YP_926247.1	catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis
YP_926248.1	KEGG: son:SO0414 leader peptidase (prepilin peptidase) / N-methyltransferase
YP_926249.1	KEGG: son:SO0415 type IV pilus biogenesis protein PilC
YP_926250.1	KEGG: son:SO0416 type IV pilus biogenesis protein PilB
YP_926251.1	KEGG: pat:Patl_3344 prepilin-type cleavage/methylation
YP_926252.1	KEGG: sdn:Sden_3387 nicotinate-nucleotide pyrophosphorylase
YP_926253.1	KEGG: sdn:Sden_3386 N-acetylmuramoyl-L-alanine amidase, family 2
YP_926254.1	involved in regulation of beta-lactamase; putative signaling protein
YP_926255.1	activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex
YP_926256.1	E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC
YP_926257.1	E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains
YP_926258.1	E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide
YP_926259.1	KEGG: son:SO0427 sensory box protein
YP_926260.1	KEGG: son:SO0428 hypothetical protein
YP_926261.1	KEGG: son:SO0429 peptidase, M13 family
YP_926262.1	YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate
YP_926263.1	catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate
YP_926264.1	KEGG: vch:VC1407 ATP-dependent RNA helicase RhlE
YP_926265.1	KEGG: sdn:Sden_0778 hypothetical protein
YP_926266.1	KEGG: rfr:Rfer_3267 glutathione S-transferase-like
YP_926267.1	binds specifically to the major sigma factor sigma 70; active in stationary phase
YP_926268.1	catalyzes the formation of coproporphyrinogen from uroporphyrinogen III
YP_926269.1	KEGG: son:SO0437 sensory box protein
YP_926270.1	KEGG: son:SO0438 short chain dehydrogenase
YP_926271.1	KEGG: son:SO0440 hypothetical protein
YP_926273.1	KEGG: son:SO0440 hypothetical protein
YP_926274.1	catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis
YP_926275.1	involved in de novo purine biosynthesis
YP_926276.1	mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators
YP_926277.1	KEGG: son:SO0444 hypothetical protein
YP_926278.1	KEGG: pha:PSHAa1953 peptidase
YP_926280.1	KEGG: vpa:VP0375 putative lipoprotein
YP_926281.1	KEGG: son:SO0523 transcriptional regulator, LysR family
YP_926282.1	KEGG: son:SO0524 HlyD family secretion protein
YP_926283.1	KEGG: son:SO0525 drug resistance transporter, EmrB/QacA family protein
YP_926284.1	KEGG: son:SO0526 acetyltransferase, GNAT family
YP_926285.1	KEGG: son:SO0527 hypothetical protein
YP_926286.1	KEGG: cps:CPS_4118 hypothetical protein
YP_926287.1	KEGG: son:SO0528 hypothetical protein
YP_926288.1	KEGG: pca:Pcar_0306 hypothetical protein
YP_926289.1	KEGG: yps:YPTB3403 hypothetical protein
YP_926290.1	KEGG: son:SO4136 decarboxylase, pyridoxal-dependent
YP_926291.1	KEGG: son:SO4134 hypothetical protein
YP_926292.1	catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway
YP_926293.1	KEGG: son:SO4131 hypothetical protein
YP_926294.1	KEGG: sdn:Sden_3072 protein of unknown function DUF107
YP_926295.1	KEGG: son:SO4129 SPFH domain/Band 7 family protein
YP_926296.1	KEGG: son:SO4128 SPFH domain/Band 7 family protein
YP_926297.1	KEGG: mes:Meso_0624 homocysteine S-methyltransferase
YP_926298.1	KEGG: bja:blr0877 two-component response regulator
YP_926299.1	unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.
YP_926300.1	catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway
YP_926301.1	periplasmic sensory protein associated with the TorRS two-component regulatory system
YP_926302.1	KEGG: son:SO0474 hypothetical protein
YP_926303.1	KEGG: xcv:XCV4020 putative mitomycin resistance protein
YP_926304.1	KEGG: vvy:VV1499 hypothetical protein
YP_926305.1	NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin
YP_926306.1	KEGG: sdn:Sden_3059 carboxylyase-related protein
YP_926307.1	KEGG: son:SO0508 hypothetical protein
YP_926308.1	KEGG: sdn:Sden_3015 peptidase M4, thermolysin
YP_926309.1	KEGG: son:SO4164 hypothetical protein
YP_926310.1	KEGG: son:SO1699 transcriptional regulator
YP_926311.1	KEGG: son:SO1698 hypothetical protein
YP_926312.1	KEGG: son:SO1695 sensory box/GGDEF family protein
YP_926314.1	KEGG: pha:PSHAb0513 putative secreted hydrolase
YP_926315.1	KEGG: vpa:VP1371 putative phosphoglycerate mutase family protein
YP_926316.1	KEGG: cps:CPS_2706 putative lipoprotein
YP_926317.1	KEGG: pae:PA1157 probable two-component response regulator
YP_926318.1	KEGG: pha:PSHAa0111 hypothetical protein
YP_926319.1	KEGG: sdn:Sden_3093 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_926320.1	heat shock protein involved in degradation of misfolded proteins
YP_926321.1	heat shock protein involved in degradation of misfolded proteins
YP_926322.1	KEGG: sdn:Sden_3358 sporulation related
YP_926323.1	catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase
YP_926324.1	KEGG: vvu:VV21346 autotransporter adhesin
YP_926325.1	KEGG: she:Shewmr4_3495 primosomal protein N'
YP_926326.1	KEGG: sdn:Sden_3355 hypothetical protein
YP_926327.1	RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome
YP_926328.1	KEGG: sdn:Sden_3353 malate dehydrogenase (oxaloacetate decarboxylating) (NADP+)
YP_926329.1	regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules
YP_926330.1	KEGG: son:SO4114.2 hypothetical biogenesis protein MshI
YP_926331.1	KEGG: sdn:Sden_3350 hypothetical protein
YP_926332.1	KEGG: son:SO4114 MSHA biogenesis protein MshJ
YP_926333.1	KEGG: son:SO4113 MSHA biogenesis protein MshK
YP_926334.1	KEGG: son:SO4112 MSHA biogenesis protein MshL
YP_926335.1	KEGG: son:SO4111 MSHA biogenesis protein MshM
YP_926336.1	KEGG: son:SO4110 MSHA biogenesis protein MshN, putative
YP_926337.1	KEGG: son:SO4109 MSHA biogenesis protein MshE
YP_926338.1	KEGG: son:SO4108 MSHA biogenesis protein MshG
YP_926339.1	KEGG: son:SO4107 hypothetical protein
YP_926340.1	KEGG: son:SO4106 MSHA pilin protein MshB
YP_926341.1	KEGG: son:SO4105 MSHA pilin protein MshA
YP_926342.1	KEGG: son:SO4104 MSHA pilin protein MshC
YP_926343.1	KEGG: son:SO4103 MSHA pilin protein MshD
YP_926344.1	KEGG: sdn:Sden_3337 MSHA biogenesis protein MshO precursor
YP_926345.1	KEGG: son:SO4101 MSHA biogenesis protein MshP
YP_926346.1	KEGG: she:Shewmr4_3473 MSHA biogenesis protein MshQ
YP_926347.2	functions in MreBCD complex in some organisms
YP_926348.1	in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall
YP_926349.1	KEGG: son:SO4096 rod shape-determining protein MreD
YP_926350.1	KEGG: sdn:Sden_3331 maf protein
YP_926351.1	involved in the processing of the 5'end of 16S rRNA
YP_926352.1	KEGG: son:SO4093 hypothetical protein
YP_926353.1	KEGG: son:SO4092 hydrolase, carbon-nitrogen family
YP_926354.1	KEGG: son:SO4091 TldD protein
YP_926355.1	KEGG: vpa:VPA1416 putative oxidoreductase
YP_926356.1	KEGG: sdn:Sden_1388 regulatory protein, TetR
YP_926357.1	KEGG: son:SO4090 outer membrane efflux protein
YP_926358.1	KEGG: son:SO4089 HlyD family secretion protein
YP_926359.1	KEGG: son:SO4088 conserved hypothetical protein
YP_926360.1	KEGG: son:SO4087 conserved hypothetical protein
YP_926361.1	KEGG: sdn:Sden_3068 protein of unknown function DUF615
YP_926362.1	KEGG: son:SO4078 PmbA protein
YP_926363.1	KEGG: son:SO4075 hypothetical protein
YP_926364.1	KEGG: son:SO4073 hypothetical protein
YP_926365.1	catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit
YP_926366.1	KEGG: son:SO4070 hypothetical protein
YP_926367.1	KEGG: xcv:XCV3915 N-acetyltransferase
YP_926368.1	KEGG: gvi:gll0899 metalloprotease MEP1 homolog
YP_926369.1	KEGG: sdn:Sden_0976 UspA
YP_926370.1	KEGG: ava:Ava_3197 Zn-dependent protease with chaperone function-like
YP_926371.1	catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase
YP_926372.1	KEGG: pat:Patl_4147 sodium/proline symporter
YP_926373.1	KEGG: hch:HCH_04651 predicted transcriptional regulator
YP_926374.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate
YP_926375.1	KEGG: son:SO0539 transporter, putative
YP_926376.1	KEGG: ilo:IL2267 signaling protein (CheY,EAL,GGDEF domain proteins)
YP_926377.1	KEGG: son:SO0541 metallo-beta-lactamase family protein
YP_926378.1	KEGG: son:SO4040 integral membrane domain protein
YP_926379.1	KEGG: son:SO4039 hydrolase, haloacid dehalogenase-like family
YP_926380.1	KEGG: son:SO4035 hypothetical protein
YP_926381.1	KEGG: son:SO0112 hypothetical protein
YP_926382.1	KEGG: sdn:Sden_2371 alkaline phosphatase
YP_926383.1	KEGG: sdn:Sden_0479 conserved hypothetical protein 22
YP_926384.1	KEGG: sdn:Sden_0480 hypothetical protein
YP_926385.1	KEGG: son:SO4182 ATP-dependent protease La (LON) domain protein, putative
YP_926386.1	KEGG: sdn:Sden_0482 pseudouridine synthase
YP_926387.1	KEGG: son:SO4178 hypothetical protein
YP_926388.1	KEGG: son:SO4176 hypothetical protein
YP_926389.1	KEGG: son:SO4174 NAD dependent epimerase/dehydratase family protein
YP_926390.1	KEGG: eca:ECA0652 hypothetical protein
YP_926391.1	KEGG: vvu:VV20989 alkyl sulfatase
YP_926392.1	KEGG: son:SO4034 ATP-dependent RNA helicase DeaD
YP_926393.1	KEGG: sdn:Sden_3316 peptidase M28
YP_926394.1	KEGG: son:SO4030 excinuclease ABC, A subunit
YP_926395.1	KEGG: son:SO4029 transporter, putative
YP_926396.1	KEGG: son:SO4028 single-strand binding protein
YP_926397.1	KEGG: cps:CPS_0943 D-beta-hydroxybutyrate dehydrogenase
YP_926398.1	KEGG: cps:CPS_1598 3-oxoadipate CoA-succinyl transferase, alpha subunit
YP_926399.1	KEGG: cps:CPS_1597 3-oxoadipate CoA-succinyl transferase, beta subunit
YP_926400.1	KEGG: cps:CPS_0935 putative polyhydroxyalkanoate depolymerase
YP_926401.1	KEGG: cps:CPS_0936 TonB-dependent receptor
YP_926402.1	KEGG: cps:CPS_0937 DNA-binding response regulator, LuxR family
YP_926403.1	KEGG: cps:CPS_0939 sensory box sensor histidine kinase/response regulator
YP_926404.1	KEGG: cps:CPS_0940 major facilitator family transporter
YP_926405.1	KEGG: cps:CPS_0941 putative lipase
YP_926406.1	KEGG: hch:HCH_02925 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
YP_926407.1	KEGG: son:SO4047 cytochrome c family protein
YP_926408.1	KEGG: son:SO4048 cytochrome c family protein
YP_926409.1	KEGG: neu:NE1275 hypothetical protein
YP_926410.1	KEGG: dar:Daro_3621 GGDEF
YP_926411.1	KEGG: shm:Shewmr7_0993 YbaK/EbsC protein
YP_926412.1	KEGG: son:SO3404 methyl-accepting chemotaxis protein
YP_926413.1	KEGG: son:SO0640 alcohol dehydrogenase, zinc-containing
YP_926414.1	KEGG: son:SO0691 hypothetical protein
YP_926415.1	KEGG: son:SO0693 aldose 1-epimerase
YP_926416.1	KEGG: son:SO0694 galactokinase
YP_926417.1	KEGG: son:SO0695 glutathione-regulated potassium-efflux system protein KefC, putative
YP_926418.1	two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm
YP_926419.1	KEGG: son:SO0697 periplasmic divalent cation tolerance protein CutA
YP_926420.1	KEGG: sdn:Sden_0418 FxsA cytoplasmic membrane protein
YP_926421.1	KEGG: son:SO0579 serine/threonine protein kinase, putative
YP_926422.1	KEGG: son:SO0581 hypothetical protein
YP_926423.1	catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide
YP_926424.1	KEGG: son:SO3896 outer membrane porin, putative
YP_926425.1	KEGG: son:SO3896 outer membrane porin, putative
YP_926426.1	KEGG: son:SO3895 HesA/MoeB/ThiF family protein
YP_926427.1	KEGG: son:SO3894 sensor histidine kinase
YP_926428.1	KEGG: sdn:Sden_0544 hypothetical protein
YP_926429.1	KEGG: sfr:Sfri_0507 hypothetical protein
YP_926430.1	KEGG: son:SO3890 methyl-accepting chemotaxis protein
YP_926431.1	KEGG: mag:amb0186 ABC-type amino acid transport/signal transduction systems
YP_926432.1	KEGG: sdn:Sden_2239 chemotaxis sensory transducer
YP_926433.1	KEGG: aba:Acid345_4155 transcriptional regulatory protein-like
YP_926434.1	KEGG: pat:Patl_1035 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_926435.1	KEGG: son:SO3800 serine protease, subtilase family
YP_926436.1	KEGG: nmu:Nmul_A1650 protein of unknown function DUF81
YP_926438.1	KEGG: cps:CPS_2647 hypothetical protein
YP_926439.1	KEGG: cps:CPS_2648 carbohydrate kinase, PfkB family
YP_926440.1	KEGG: pat:Patl_0119 glucose/galactose transporter
YP_926441.1	KEGG: cps:CPS_2650 alpha-1,2-mannosidase family protein
YP_926442.1	KEGG: cps:CPS_2651 alpha-1,2-mannosidase family protein
YP_926443.1	KEGG: cps:CPS_2652 transcriptional regulator, LacI family
YP_926444.1	KEGG: son:SO0823 hypothetical protein
YP_926446.1	KEGG: son:SO0826 hypothetical protein
YP_926447.1	KEGG: son:SO0828 ribosomal RNA small subunit methyltransferase C
YP_926448.1	KEGG: nmu:Nmul_A1955 hypothetical protein
YP_926449.1	KEGG: cps:CPS_0951 hypothetical protein
YP_926450.1	KEGG: pat:Patl_0060 diguanylate cyclase/phosphodiesterase
YP_926451.1	KEGG: son:SO0830 alkaline phosphatase
YP_926452.1	catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione
YP_926453.1	in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase
YP_926454.1	KEGG: son:SO0833 endonuclease I
YP_926455.1	KEGG: son:SO0834 sprT protein, putative
YP_926456.1	KEGG: son:SO0835 hypothetical protein
YP_926457.1	KEGG: son:SO0839 transcriptional regulator, LysR family
YP_926458.1	KEGG: son:SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase
YP_926459.1	KEGG: pat:Patl_0484 hypothetical protein
YP_926460.1	KEGG: dar:Daro_2871 hypothetical protein
YP_926461.1	KEGG: pat:Patl_0006 diguanylate cyclase
YP_926462.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_926463.1	KEGG: sdn:Sden_3443 hypothetical protein
YP_926464.1	KEGG: son:SO0843 transcriptional regulator, LysR family
YP_926465.1	KEGG: sdn:Sden_0640 PepSY-associated TM helix
YP_926466.1	KEGG: sdn:Sden_0639 FMN-binding
YP_926467.1	KEGG: sdn:Sden_0638 phosphate-selective porin O and P
YP_926468.1	KEGG: pha:PSHAa2478 putative TonB-dependent receptor protein
YP_926469.1	KEGG: son:SO4011 hypothetical protein
YP_926470.1	KEGG: son:SO4008 hypothetical protein
YP_926471.1	KEGG: sdn:Sden_2990 hypothetical protein
YP_926472.1	KEGG: son:SO4006 hypothetical protein
YP_926473.1	KEGG: she:Shewmr4_0642 sodium:dicarboxylate symporter
YP_926474.1	KEGG: vch:VCA0275 IS1004 transposase
YP_926475.1	KEGG: shm:Shewmr7_3377 hypothetical protein
YP_926476.1	catalyzes the hydrolysis of pyrophosphate to phosphate
YP_926477.1	catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate
YP_926478.1	KEGG: son:SO3990 dipeptidyl peptidase IV
YP_926479.1	KEGG: son:SO3988 aerobic respiration control protein ArcA
YP_926480.1	KEGG: son:SO3987 hypothetical protein
YP_926481.1	catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive
YP_926482.1	KEGG: son:SO3985 hypothetical protein
YP_926483.1	transcriptional repressor of asnA which codes for aspartate-ammonia ligase
YP_926484.1	KEGG: sdn:Sden_3048 pseudouridylate synthase
YP_926485.1	KEGG: aba:Acid345_4155 transcriptional regulatory protein-like
YP_926486.1	KEGG: son:SO0973 hypothetical protein
YP_926487.1	KEGG: son:SO0972 hypothetical protein
YP_926488.1	KEGG: son:SO0971 hypothetical protein
YP_926489.1	KEGG: son:SO0970 fumarate reductase flavoprotein subunit precursor
YP_926490.1	KEGG: son:SO0968 D-lactate dehydrogenase
YP_926491.1	KEGG: sdn:Sden_3046 dienelactone hydrolase
YP_926492.1	KEGG: sdn:Sden_3043 hypothetical protein
YP_926493.1	KEGG: son:SO0960 hypothetical spermidine synthase
YP_926494.1	KEGG: son:SO0959 cytosol aminopeptidase
YP_926495.1	KEGG: son:SO0958 alkyl hydroperoxide reductase, C subunit
YP_926496.1	KEGG: son:SO0956 alkyl hydroperoxide reductase, F subunit
YP_926497.1	KEGG: syf:Synpcc7942_2096 diguanylate cyclase (GGDEF domain protein)
YP_926498.1	KEGG: sdn:Sden_0607 hypothetical protein
YP_926499.1	KEGG: sdn:Sden_0606 hypothetical protein
YP_926500.1	KEGG: sdn:Sden_3010 chemotaxis sensory transducer
YP_926501.1	KEGG: vpa:VP1367 putative transcriptional regulator, LysR family
YP_926503.1	KEGG: son:SO0974 hypothetical protein
YP_926504.1	KEGG: son:SO0975 hypothetical protein
YP_926506.1	KEGG: son:SO0977 transcriptional regulator, MarR family
YP_926507.1	KEGG: son:SO0978 glycerol-3-phosphate dehydrogenase
YP_926508.1	RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA
YP_926509.1	KEGG: son:SO0981 sensor histidine kinase
YP_926510.1	KEGG: cps:CPS_3172 DNA-binding response regulator
YP_926512.1	KEGG: sde:Sde_0548 PAS/PAC sensor signal transduction histidine kinase
YP_926513.1	KEGG: son:SO4539 serine protease, subtilase family
YP_926514.1	KEGG: sdn:Sden_3160 chromate transporter
YP_926515.1	KEGG: son:SO1060 hypothetical protein
YP_926516.1	KEGG: son:SO1061 TPR domain protein
YP_926517.1	KEGG: son:SO1062 polypeptide deformylase
YP_926518.1	KEGG: son:SO1063 SlyX protein
YP_926519.1	KEGG: son:SO1064 hypothetical WD domain protein
YP_926520.1	KEGG: son:SO1065 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA
YP_926521.1	KEGG: vvy:VVA0728 methyl-accepting chemotaxis protein
YP_926522.1	KEGG: son:SO3984 magnesium transporter, putative
YP_926523.1	KEGG: son:SO3983 hypothetical protein
YP_926524.1	KEGG: son:SO3982 DNA-binding nitrate/nitrite response regulator
YP_926525.1	KEGG: son:SO3981 nitrate/nitrite sensor protein NarQ
YP_926526.1	catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552
YP_926527.1	KEGG: son:SO0762 isochorismatase family protein
YP_926528.1	KEGG: son:SO0761 nitrogen regulatory protein P-II 1
YP_926529.1	KEGG: sdn:Sden_2904 Rh-like protein/ammonium transporter
YP_926530.1	KEGG: sdn:Sden_2903 hypothetical protein
YP_926531.1	KEGG: son:SO0757 TPR domain protein
YP_926532.1	KEGG: pen:PSEEN2423 methyl-accepting chemotaxis transducer/sensory box protein
YP_926533.1	KEGG: son:SO1700 hypothetical protein
YP_926534.1	KEGG: son:SO1701 hypothetical protein
YP_926535.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive
YP_926536.1	KEGG: son:SO0755 hypothetical protein
YP_926537.1	KEGG: son:SO0754 ABC transporter, ATP-binding protein
YP_926538.1	KEGG: son:SO0753 hypothetical protein
YP_926539.1	KEGG: son:SO0752 hypothetical protein
YP_926540.1	KEGG: son:SO0748 hypothetical protein
YP_926541.1	KEGG: son:SO0747 ferredoxin--NADP reductase
YP_926542.1	KEGG: son:SO0746 glutathione S-transferase family protein
YP_926543.1	KEGG: son:SO0745 hypothetical protein
YP_926544.1	KEGG: son:SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein
YP_926545.1	KEGG: son:SO0743 iron(III) ABC transporter, permease protein
YP_926546.1	KEGG: son:SO0742 iron(III) ABC transporter, ATP-binding protein
YP_926547.1	KEGG: son:SO0741 gamma-glutamyltranspeptidase
YP_926548.1	KEGG: son:SO0740 melanin biosynthesis protein TyrA, putative
YP_926549.1	regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes
YP_926550.1	oxidizes malate to oxaloacetate
YP_926551.1	KEGG: ppr:PBPRB1679 hypothetical multidrug resistance protein
YP_926552.1	KEGG: ppr:PBPRB1678 hypothetical periplasmic linker protein
YP_926553.1	KEGG: ppr:PBPRB1677 putative transporter, AcrB/D/F family
YP_926554.1	KEGG: tdn:Tmden_1847 hypothetical protein
YP_926555.1	KEGG: son:SO3797 peptidase, U32 family
YP_926556.1	KEGG: son:SO3796 hypothetical protein
YP_926557.1	KEGG: son:SO1309 hypothetical TonB-dependent receptor
YP_926558.1	KEGG: son:SO4705 transcriptional regulator, putative
YP_926559.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_926560.1	KEGG: eca:ECA2791 putative glutathione S-transferase
YP_926561.1	KEGG: ppr:PBPRB1101 hypothetical protein
YP_926562.1	KEGG: son:SO1388 aminopeptidase P, putative
YP_926563.1	KEGG: cps:CPS_1700 hypothetical protein
YP_926564.1	KEGG: son:SO1389 ROK family protein
YP_926565.1	KEGG: ava:Ava_4314 ankyrin
YP_926566.1	KEGG: sdn:Sden_0888 peptidase M24
YP_926567.1	KEGG: son:SO1390 peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_926568.1	KEGG: cps:CPS_0148 cold-shock DNA-binding domain family protein
YP_926569.1	KEGG: son:SO1396 hypothetical protein
YP_926570.1	KEGG: son:SO3758 hypothetical protein
YP_926571.1	KEGG: son:SO3757 RuBisCo operon transcriptional regulator
YP_926572.1	KEGG: vpa:VP2004 hypothetical protein
YP_926573.1	KEGG: son:SO3588 gpr1/fun34/YaaH family protein
YP_926574.1	KEGG: vch:VC2747 hypothetical protein
YP_926575.1	KEGG: hch:HCH_04311 outer membrane protein and related peptidoglycan-associated (LipO)protein
YP_926576.1	KEGG: nwi:Nwi_1814 OmpA/MotB
YP_926577.1	KEGG: ilo:IL0155 response regulator, LuxR family (CheY-HTH)
YP_926578.1	KEGG: ilo:IL0910 Flp/Fap pilin homolog
YP_926579.1	KEGG: bxe:Bxe_B2914 hypothetical protein
YP_926580.1	KEGG: ilo:IL0909 uncharacterized secreted protein
YP_926581.1	KEGG: bxe:Bxe_B2916 hypothetical protein
YP_926584.1	KEGG: bxe:Bxe_B2919 putative Flp pilus assembly CpaB
YP_926585.1	KEGG: bxe:Bxe_B2920 putative type II and III secretion system outermembrane protein, secretin
YP_926586.1	KEGG: bxe:Bxe_B2921 type II/IV secretion system protein E
YP_926587.1	KEGG: bxe:Bxe_B2922 putative type II secretion system protein F
YP_926588.1	KEGG: bxe:Bxe_B2923 putative type II secretion system protein F
YP_926589.1	KEGG: bba:Bd0471 putative secreted protein
YP_926590.1	KEGG: mac:MA1970 hypothetical protein
YP_926591.1	KEGG: bxe:Bxe_B2925 hypothetical protein
YP_926592.1	KEGG: hwa:HQ3601A cell surface calcium-binding acidic-repeat protein
YP_926595.1	KEGG: ilo:IL0291 hypothetical protein
YP_926599.1	KEGG: sdn:Sden_0706 protein of unknown function DUF583
YP_926600.1	KEGG: ilo:IL1305 UspA-related nucleotide-binding protein
YP_926601.1	KEGG: son:SO3754 hypothetical protein
YP_926602.1	KEGG: tfu:Tfu_2363 putative zinc proteinase
YP_926603.1	KEGG: son:SO3749 hypothetical protein
YP_926604.1	KEGG: sdn:Sden_0707 ErfK/YbiS/YcfS/YnhG
YP_926605.1	Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon
YP_926606.1	KEGG: rfr:Rfer_1886 putative nitric oxide reductase (subunit B) transmembrane protein
YP_926607.1	the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli
YP_926608.1	KEGG: son:SO3746 lipid A biosynthesis lauroyl acyltransferase
YP_926609.1	catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose
YP_926610.1	KEGG: son:SO3744 hypothetical protein
YP_926611.1	KEGG: son:SO3743 transcriptional regulator, TetR family
YP_926612.1	KEGG: cps:CPS_4118 hypothetical protein
YP_926613.1	KEGG: hch:HCH_04210 hypothetical protein
YP_926614.1	KEGG: jan:Jann_3255 rhomboid-like protein
YP_926615.1	KEGG: sdn:Sden_0711 putative esterase
YP_926616.1	KEGG: son:SO0452 thioredoxin 2
YP_926617.1	KEGG: son:SO1154 hypothetical protein
YP_926618.1	glycosyltransferase; polymerizes glycan strands in the peptidoglycan
YP_926619.1	KEGG: pae:PA0085 hypothetical protein
YP_926621.1	KEGG: pae:PA2706 hypothetical protein
YP_926622.1	KEGG: son:SO4539 serine protease, subtilase family
YP_926623.1	KEGG: son:SO0725 catalase/peroxidase HPI
YP_926624.1	KEGG: mag:amb2742 permease of the drug/metabolite transporter superfamily
YP_926625.1	KEGG: xcb:XC_1756 two-component system sensor protein
YP_926626.1	KEGG: pat:Patl_2089 diguanylate cyclase
YP_926627.1	KEGG: son:SO0721 hypothetical protein
YP_926628.1	KEGG: son:SO1771.2 hypothetical catalase
YP_926629.1	KEGG: vfi:VF0971 GTP-binding protein HflX
YP_926630.1	exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA
YP_926631.1	KEGG: pfo:Pfl_2272 hypothetical protein
YP_926632.1	KEGG: ava:Ava_B0104 sulfate transporter/antisigma-factor antagonist STAS
YP_926633.1	KEGG: son:SO4537 peptidase, putative
YP_926635.1	one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity
YP_926636.1	KEGG: son:SO1031 alpha-ribazole-5'-phosphate phosphatase, putative
YP_926637.1	KEGG: son:SO1033 iron-compound ABC transporter, ATP-binding protein, putative
YP_926638.1	KEGG: son:SO1034 iron-compound ABC transporter, permease protein
YP_926639.1	catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole
YP_926640.1	KEGG: son:SO1036 cobalamin 5'-phosphate synthase
YP_926641.1	KEGG: son:SO1037 cobinamide kinase/cobinamide phosphate guanylyltransferase
YP_926642.1	catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
YP_926643.1	catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide
YP_926644.1	KEGG: pae:PA2920 probable chemotaxis transducer
YP_926645.1	KEGG: son:SO1187 hypothetical protein
YP_926646.1	KEGG: sdn:Sden_0656 UDP-N-acetylmuramate
YP_926647.1	KEGG: son:SO3804 phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative
YP_926648.1	KEGG: son:SO3803 hypoxanthine phosphoribosyltransferase
YP_926649.1	KEGG: son:SO3802 ABC transporter, ATP-binding protein
YP_926650.1	KEGG: sdn:Sden_0652 ABC-2
YP_926651.1	KEGG: son:SO0868 hypothetical protein
YP_926652.1	catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine
YP_926653.1	catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate
YP_926654.1	KEGG: son:SO0871 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_926655.1	KEGG: son:SO0872 tRNA nucleotidyltransferase (CCA-adding enzyme)
YP_926656.1	KEGG: son:SO0873 glutamyl-tRNA synthetase domain protein
YP_926657.1	KEGG: son:SO0874 DnaK suppressor protein
YP_926658.1	Regulatory factor involved in maltose metabolism
YP_926659.1	catalyzes the removal of an N-terminal amino acid from a peptide or arylamide
YP_926660.1	KEGG: sdn:Sden_0809 GGDEF domain protein
YP_926661.1	KEGG: sdn:Sden_0807 hypothetical protein
YP_926662.1	KEGG: sdn:Sden_0806 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_926663.1	KEGG: sdn:Sden_0805 GCN5-related N-acetyltransferase
YP_926664.1	KEGG: sdn:Sden_0804 peptidase A1, pepsin
YP_926665.1	KEGG: hch:HCH_03990 predicted transcriptional regulator
YP_926666.1	KEGG: hch:HCH_01841 aspartate ammonia-lyase
YP_926667.1	valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain
YP_926668.1	KEGG: son:SO3423 DNA polymerase III, chi subunit
YP_926669.1	KEGG: vfi:VFA0088 transcriptional regulator
YP_926670.1	KEGG: vfi:VFA0087 outer membrane protein RomA
YP_926671.1	KEGG: hypothetical protein
YP_926672.1	catalyzes the removal of N-terminal amino acids preferably leucine from various peptides
YP_926673.1	KEGG: son:SO1369 hypothetical protein
YP_926674.1	KEGG: son:SO1370 hypothetical protein
YP_926675.1	KEGG: sdn:Sden_0876 conserved hypothetical proteinF
YP_926676.1	KEGG: son:SO1372 hypothetical protein
YP_926677.1	KEGG: son:SO1373 hypothetical protein
YP_926678.1	KEGG: son:SO1374 acetyltransferase, GNAT family
YP_926679.1	KEGG: son:SO1375 carboxypeptidase
YP_926680.1	KEGG: son:SO1376 hypothetical protein
YP_926681.1	KEGG: son:SO1377 hypothetical protein
YP_926682.1	KEGG: sdn:Sden_0883 hypothetical protein
YP_926683.1	KEGG: son:SO1380 hypothetical protein
YP_926684.1	KEGG: sdn:Sden_0885 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_926685.1	KEGG: sfr:Sfri_3068 DEAD/DEAH box helicase domain protein
YP_926686.1	KEGG: pha:PSHAa0134 hypothetical protein
YP_926687.1	KEGG: son:SO3386 hypothetical protein
YP_926688.1	KEGG: son:SO3384 deoxyribodipyrimidine photolyase
YP_926689.1	KEGG: son:SO3383 transcriptional regulator-related protein
YP_926690.1	KEGG: son:SO3382 oxidoreductase, short-chain dehydrogenase/reductase family
YP_926691.1	KEGG: son:SO3381 hypothetical protein
YP_926692.1	KEGG: son:SO3380 hypothetical protein
YP_926693.1	KEGG: son:SO3379 cyclopropane-fatty-acyl-phospholipid synthase
YP_926694.1	KEGG: son:SO3378 hypothetical protein
YP_926695.1	KEGG: son:SO3377 hypothetical protein
YP_926696.1	KEGG: son:SO3376 hypothetical protein
YP_926697.1	KEGG: sdn:Sden_0757 lipoprotein, putative
YP_926698.1	KEGG: son:SO0453 peptidyl-prolyl cis-trans isomerase FkbP
YP_926699.1	KEGG: pae:PA4470 fumarate hydratase
YP_926700.1	KEGG: son:SO1284 RNA polymerase sigma-70 factor
YP_926701.1	KEGG: son:SO1286 DNA primase
YP_926702.1	KEGG: son:SO1287 hypothetical protein
YP_926703.1	a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA
YP_926704.1	in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity
YP_926705.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX
YP_926706.1	KEGG: son:SO1291 dihydroneopterin aldolase
YP_926707.1	KEGG: sdn:Sden_2827 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_926708.1	BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell
YP_926709.1	KEGG: son:SO1294 ribosomal RNA large subunit methyltransferase A, putative
YP_926710.1	KEGG: son:SO1295 major outer membrane lipoprotein, putative
YP_926711.1	KEGG: sdn:Sden_2823 polynucleotide adenylyltransferase region
YP_926712.1	KEGG: sdn:Sden_2822 peptidoglycan-binding domain 1
YP_926713.1	KEGG: son:SO1298 general secretion pathway protein B
YP_926714.1	KEGG: sdn:Sden_2820 citrate transporter
YP_926716.1	Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway
YP_926717.1	Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate
YP_926718.1	KEGG: son:SO1302 chloride channel
YP_926719.1	KEGG: shm:Shewmr7_2972 hypothetical protein
YP_926720.1	essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors
YP_926721.1	KEGG: son:SO1305 hypothetical protein
YP_926722.1	KEGG: sdn:Sden_2813 hypothetical protein
YP_926723.1	KEGG: son:SO1310 hypothetical protein
YP_926724.1	KEGG: son:SO1312 TolB domain protein
YP_926725.1	catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling
YP_926726.1	KEGG: son:SO1314 peptidase, M23/M37 family
YP_926727.1	catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr)
YP_926728.1	KEGG: son:SO1318 hypothetical protein
YP_926729.1	KEGG: son:SO1319 hypothetical protein
YP_926730.1	KEGG: son:SO1320 hypothetical protein
YP_926731.1	KEGG: son:SO1321 CobD-related protein
YP_926732.1	KEGG: sdn:Sden_2801 methylthioadenosine nucleosidase
YP_926733.1	glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate
YP_926734.1	catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate
YP_926735.1	KEGG: son:SO1326 hypothetical protein
YP_926736.1	KEGG: sdn:Sden_2789 Hpt
YP_926737.1	KEGG: son:SO1328 transcriptional regulator, LysR family
YP_926738.1	KEGG: son:SO1329 adenylate cyclase-related protein
YP_926739.1	MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair
YP_926740.1	hydrolyzes diadenosine polyphosphate
YP_926741.1	KEGG: son:SO1332 phosphoenolpyruvate-protein phosphotransferase PtsP
YP_926742.1	KEGG: son:SO1333 hypothetical protein
YP_926743.1	transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein
YP_926744.1	ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived
YP_926745.1	exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH
YP_926746.1	KEGG: son:SO1337 hypothetical protein
YP_926747.1	Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC
YP_926748.1	KEGG: son:SO1339 hypothetical protein
YP_926749.1	KEGG: son:SO1340 hypothetical protein
YP_926750.1	catalyzes the formation of oxaloacetate from L-aspartate
YP_926751.1	Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response
YP_926752.1	KEGG: son:SO1343 sigma-E factor negative regulatory protein
YP_926753.1	KEGG: son:SO1344 sigma-E factor regulatory protein RseB
YP_926754.1	KEGG: son:SO1345 sigma-E factor regulatory protein RseC
YP_926755.1	binds to the ribosome on the universally-conserved alpha-sarcin loop
YP_926756.1	KEGG: son:SO1347 signal peptidase I
YP_926757.1	cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity
YP_926758.1	Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome
YP_926759.1	KEGG: son:SO1350 DNA repair protein RecO
YP_926760.1	involved in the de novo synthesis of pyridoxine (Vitamin B6)
YP_926761.1	Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids
YP_926762.1	KEGG: sdn:Sden_2761 protein of unknown function DUF962
YP_926763.1	KEGG: sdn:Sden_2757 protein of unknown function DUF21
YP_926764.1	KEGG: son:SO1355 hypothetical protein
YP_926765.1	with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins
YP_926766.1	binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity
YP_926767.1	Essential for efficient processing of 16S rRNA
YP_926768.1	methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA
YP_926769.1	this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site
YP_926770.1	catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive
YP_926771.1	catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis
YP_926772.1	catalyzes the reduction of hydroxylamine to ammonia and water
YP_926773.1	KEGG: son:SO1364 iron-sulfur cluster-binding protein
YP_926774.1	KEGG: sdn:Sden_2748 hypothetical protein
YP_926775.1	KEGG: son:SO1367 prephenate dehydratase / chorismate mutase / phospho-2-dehydro-3-deoxyheptonate aldolase
YP_926776.1	KEGG: son:SO3422 ribosomal subunit interface protein
YP_926777.1	KEGG: son:SO3421 b-type cytochrome, putative
YP_926778.1	KEGG: sdn:Sden_2744 cytochrome c, class II
YP_926779.1	KEGG: sdn:Sden_2743 Trp repressor
YP_926780.1	KEGG: sdn:Sden_2742 hypothetical protein
YP_926781.1	KEGG: son:SO3417 peptidyl-prolyl cis-trans isomerase SlyD
YP_926782.1	multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_926783.1	catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate
YP_926784.1	catalyzes the formation of L-threonine from O-phospho-L-homoserine
YP_926785.1	KEGG: mag:amb3313 signal transduction histidine kinase
YP_926786.1	KEGG: dar:Daro_3172 response regulator receiver
YP_926787.1	KEGG: son:SO3549 hypothetical protein
YP_926788.1	KEGG: son:SO3548 hypothetical protein
YP_926789.1	functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family
YP_926790.1	KEGG: son:SO3546 transaldolase
YP_926791.1	KEGG: sdn:Sden_2732 OmpA/MotB
YP_926792.1	KEGG: son:SO3542 putative phosphoketolase
YP_926793.1	KEGG: son:SO3541 sodium:alanine symporter family protein
YP_926794.1	KEGG: vch:VC2355 hypothetical protein
YP_926795.1	KEGG: vch:VCA0275 IS1004 transposase
YP_926796.1	KEGG: sdn:Sden_2728 peptidase M28
YP_926797.1	KEGG: son:SO3538 transcriptional regulator HlyU
YP_926798.1	binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase
YP_926799.1	KEGG: sdn:Sden_2725 integral membrane protein MviN
YP_926800.1	KEGG: son:SO3533 riboflavin biosynthesis protein RibF
YP_926801.1	IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme
YP_926802.1	lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis
YP_926803.1	KEGG: sdn:Sden_2721 peptidylprolyl isomerase, FKBP-type
YP_926804.1	catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway
YP_926805.1	KEGG: son:SO3528 type IV pilus assembly protein PilV
YP_926806.1	KEGG: son:SO3527 type IV pilus assembly protein PilW
YP_926807.1	KEGG: shm:Shewmr7_3033 type IV pilus assembly protein PilX
YP_926808.1	KEGG: son:SO3525 type IV pilin biogenesis protein, putative
YP_926809.1	KEGG: son:SO3524 type IV pilus biogenesis protein PilE
YP_926810.1	KEGG: she:Shewmr4_2947 methylation site containing protein
YP_926811.1	KEGG: son:SO3520 type IV pilus biogenesis protein, putative
YP_926812.1	KEGG: sdn:Sden_2711 nitrogen regulatory protein P-II
YP_926813.1	KEGG: son:SO3517 NADH dehydrogenase
YP_926814.1	KEGG: son:SO3516 transcriptional regulator, LacI family
YP_926815.1	KEGG: sdn:Sden_2708 TonB-dependent receptor
YP_926816.1	KEGG: sdn:Sden_2707 tryptophan halogenase
YP_926817.1	KEGG: son:SO3512 hypothetical protein
YP_926818.1	KEGG: sde:Sde_2658 type IV pilus assembly protein PilM
YP_926819.1	KEGG: sde:Sde_0391 putative methyl-accepting chemotaxis sensory transducer
YP_926820.1	KEGG: son:SO3509 beta-hexosaminidase b precursor
YP_926821.1	KEGG: son:SO3507 hypothetical protein
YP_926822.1	KEGG: son:SO3506 glucosamine-6-phosphate isomerase
YP_926823.1	KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase
YP_926824.1	KEGG: son:SO3504 hypothetical protein
YP_926825.1	KEGG: sde:Sde_3038 multiple antibiotic resistance (MarC)-related proteins
YP_926826.1	KEGG: csa:Csal_1313 cytochrome b561
YP_926827.1	KEGG: son:SO3370 hypothetical protein
YP_926828.1	KEGG: son:SO1191 transcription elongation factor GreA
YP_926829.1	KEGG: son:SO1195 putative RNA-binding protein containing KH domain
YP_926830.1	Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit
YP_926831.1	KEGG: son:SO1197 cell division protein FtsH
YP_926832.1	KEGG: son:SO1198 dihydropteroate synthase
YP_926833.1	catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
YP_926834.1	Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate
YP_926835.1	KEGG: son:SO1201 preprotein translocase, SecG subunit
YP_926836.1	in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins
YP_926837.1	modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination
YP_926838.1	Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
YP_926839.1	associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock
YP_926840.1	catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs
YP_926841.1	primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence
YP_926842.1	KEGG: son:SO1208 GGDEF domain protein protein
YP_926843.1	KEGG: son:SO1209 polyribonucleotide nucleotidyltransferase
YP_926844.1	lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing
YP_926845.1	stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein
YP_926847.1	KEGG: sdn:Sden_1022 TatD-related deoxyribonuclease
YP_926848.1	KEGG: sdn:Sden_1023 nucleoside transporter
YP_926849.1	KEGG: vfi:VF0719 putative sugar hydrolase
YP_926850.1	catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate
YP_926851.1	Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate
YP_926852.1	catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose
YP_926853.1	catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate
YP_926854.1	KEGG: son:SO1222 membrane protein
YP_926855.1	KEGG: son:SO1223 phosphoserine phosphatase
YP_926856.1	KEGG: shm:Shewmr7_1108 alpha/beta hydrolase fold
YP_926857.1	KEGG: son:SO1225 hypothetical protein
YP_926858.1	Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents
YP_926859.1	KEGG: son:SO1227 hypothetical protein
YP_926860.1	response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes
YP_926861.1	periplasmic sensory protein associated with the TorRS two-component regulatory system
YP_926862.1	KEGG: son:SO1230 sensor histidine kinase/response regulator TorS
YP_926863.1	TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor
YP_926864.1	KEGG: son:SO1232 trimethylamine-N-oxide reductase
YP_926865.1	KEGG: son:SO1233 tetraheme cytochrome c
YP_926866.1	KEGG: son:SO1234 warning TorE protein
YP_926867.1	KEGG: son:SO1237 acetoin utilization protein AcuB, putative
YP_926868.1	KEGG: son:SO1238 acyltransferase family protein
YP_926869.1	KEGG: son:SO1239 hypothetical protein
YP_926870.1	KEGG: cps:CPS_2607 GGDEF domain protein protein
YP_926871.1	KEGG: son:SO1245 hypothetical protein
YP_926872.1	KEGG: son:SO1385 methyl-accepting chemotaxis protein
YP_926873.1	KEGG: son:SO1247 hypothetical protein
YP_926874.1	KEGG: sdn:Sden_1038 peptidase U32
YP_926875.1	KEGG: son:SO1249 peptidase, U32 family
YP_926876.1	KEGG: son:SO1250 hypothetical protein
YP_926877.1	KEGG: vvu:VV13195 multidrug resistance efflux pump
YP_926878.1	KEGG: vvu:VV20703 permease of the major facilitator superfamily
YP_926879.1	KEGG: son:SO1251 ferredoxin, 4Fe-4S
YP_926881.1	KEGG: son:SO1252 peptidase, U32 family
YP_926882.1	KEGG: sdn:Sden_1046 hypothetical protein
YP_926883.1	KEGG: son:SO1255 cyclic nucleotide phosphodiesterase, putative
YP_926884.1	KEGG: son:SO1256 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_926885.1	KEGG: sdn:Sden_1052 conserved hypothetical amino acid ABC transporter
YP_926886.1	KEGG: sdn:Sden_2716 type IV pilin biogenesis protein, putative
YP_926888.1	KEGG: son:SO3481 hypothetical protein
YP_926889.1	KEGG: son:SO3480 hypothetical protein phosphatase
YP_926890.1	ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence
YP_926891.1	catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate
YP_926892.1	KEGG: son:SO3470 ATP-cone domain protein
YP_926893.1	KEGG: son:SO3469 riboflavin biosynthesis protein RibD
YP_926894.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_926895.1	KEGG: sdn:Sden_1146 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_926896.1	RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not
YP_926897.1	Regulates rRNA biosynthesis by transcriptional antitermination
YP_926898.1	KEGG: son:SO3464 thiamin-monophosphate kinase
YP_926899.1	KEGG: son:SO3463 phosphatidylglycerophosphatase A
YP_926900.1	KEGG: sdn:Sden_2190 protein of unknown function DUF107
YP_926901.1	KEGG: cps:CPS_2685 SPFH domain/band 7 family domain protein
YP_926902.1	KEGG: sdn:Sden_1376 thiamine pyrophosphate enzyme-like TPP binding region
YP_926903.1	KEGG: son:SO3462 DNA repair protein RecN
YP_926904.1	KEGG: son:SO3461 transporter, putative
YP_926905.1	KEGG: son:SO3460 transcriptional regulator, LysR family
YP_926906.1	KEGG: son:SO3459 hypothetical protein
YP_926907.1	KEGG: son:SO3458 hypothetical protein
YP_926908.1	part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system
YP_926909.1	in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]
YP_926910.1	KEGG: son:SO3455 GTP pyrophosphokinase
YP_926911.1	functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era
YP_926912.1	CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer
YP_926913.1	enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis
YP_926914.1	KEGG: son:SO3439 cell division protein FtsB
YP_926915.1	4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers
YP_926916.1	catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate
YP_926917.1	KEGG: son:SO3436 tRNA pseudouridine synthase D
YP_926918.1	catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate
YP_926919.1	KEGG: sdn:Sden_1202 protein-L-isoaspartate O-methyltransferase
YP_926920.1	KEGG: son:SO3433 lipoprotein NlpD
YP_926921.1	KEGG: son:SO3432 RNA polymerase sigma-38 factor
YP_926922.1	This protein performs the mismatch recognition step during the DNA repair process
YP_926923.1	catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs
YP_926924.1	KEGG: son:SO3429 regulatory protein RecX
YP_926925.1	Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_926926.1	KEGG: son:SO3427 aspartokinase
YP_926927.1	KEGG: son:SO3426 carbon storage regulator
YP_926928.1	KEGG: cps:CPS_1048 oxaloacetate decarboxylase, gamma subunit
YP_926929.1	catalyzes the formation of pyruvate from oxaloacetate
YP_926930.1	KEGG: vpa:VP2543 oxaloacetate decarboxylase, beta subunit
YP_926931.1	KEGG: pat:Patl_3131 membrane protein
YP_926932.1	KEGG: sdn:Sden_1216 sodium:dicarboxylate symporter
YP_926933.1	KEGG: son:SO3561 hypothetical protein
YP_926934.1	KEGG: son:SO3560 peptidase, M16 family
YP_926935.1	involved in the first step of glutathione biosynthesis
YP_926936.1	KEGG: son:SO3558 hypothetical protein
YP_926937.1	KEGG: son:SO3557 hypothetical protein
YP_926938.1	KEGG: son:SO1002 hypothetical protein
YP_926939.1	KEGG: sdn:Sden_1222 GGDEF domain protein
YP_926940.1	With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway
YP_926941.1	KEGG: son:SO3554 phosphoribosylaminoimidazole carboxylase, catalytic subunit
YP_926942.1	KEGG: rso:RSc0932 putative membrane-bound dehydrogenase oxidoreductase protein
YP_926943.1	KEGG: vvy:VV3101 hypothetical protein
YP_926944.1	putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport
YP_926945.1	KEGG: son:SO3551 RNA polymerase sigma-70 factor, ECF subfamily
YP_926946.1	KEGG: son:SO3550 hypothetical protein
YP_926947.1	KEGG: son:SO3412 extracellular solute-binding proteins, family 3 protein
YP_926948.1	KEGG: son:SO1387 HD domain protein
YP_926949.2	Required for efficient pilin antigenic variation
YP_926950.1	KEGG: sdn:Sden_2690 porin, gram-negative type
YP_926951.1	KEGG: son:SO1558 phosphate regulon response regulator PhoB
YP_926952.1	KEGG: son:SO1559 phosphate regulon sensor protein PhoR
YP_926953.1	KEGG: son:SO1560 phosphate-binding protein
YP_926954.1	KEGG: cps:CPS_1458 microbial collagenase
YP_926955.1	KEGG: son:SO1561 peptidase, M1 family
YP_926957.1	KEGG: bce:BC2114 glutathione peroxidase
YP_926958.1	KEGG: son:SO1565 magnesium transporter, putative
YP_926959.1	KEGG: son:SO1566 acetyltransferase, GNAT family
YP_926960.1	KEGG: son:SO1569 integral membrane domain protein
YP_926961.1	KEGG: son:SO1570 GGDEF domain protein protein
YP_926962.1	KEGG: son:SO1572 hypothetical protein
YP_926963.1	KEGG: sdn:Sden_2643 Fmu (Sun)
YP_926964.1	KEGG: son:SO1576 glutathione S-transferase family protein
YP_926965.1	KEGG: son:SO1577 glutathione S-transferase family protein
YP_926966.1	KEGG: son:SO1578 transcriptional regulator, TetR family
YP_926967.1	KEGG: sdn:Sden_2642 hypothetical protein
YP_926968.1	KEGG: son:SO1581 PhnA protein
YP_926969.1	KEGG: son:SO1583 hypothetical protein
YP_926970.1	KEGG: sdn:Sden_2637 fumarylacetoacetate (FAA) hydrolase
YP_926971.1	KEGG: dvu:DVUA0150 bacterial extracellular solute-binding protein, family 3
YP_926972.1	KEGG: vfi:VF0983 hypothetical protein
YP_926973.1	KEGG: son:SO1589 hypothetical protein
YP_926974.1	KEGG: son:SO1588 hypothetical protein
YP_926976.1	KEGG: vvy:VVA1444 hypothetical protein
YP_926977.1	KEGG: son:SO3831 acetyltransferase, GNAT family
YP_926978.1	KEGG: son:SO2198 hypothetical aminopeptidase
YP_926979.1	KEGG: cps:CPS_2152 thrombospondin type 3 repeat family protein/Calx-beta domain protein
YP_926980.1	KEGG: xcv:XCV0335 two-component system sensor protein
YP_926981.1	KEGG: hch:HCH_00064 response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
YP_926982.1	KEGG: sde:Sde_0667 response regulator receiver domain protein (CheY-like)
YP_926983.1	KEGG: vvy:VVA1430 histone acetyltransferase HPA2
YP_926984.1	KEGG: vvy:VVA1671 fructose-2;6-bisphosphatase
YP_926985.1	KEGG: pha:PSHAa2848 alpha-glucosidase
YP_926986.1	KEGG: ilo:IL1490 hypothetical protein
YP_926988.1	KEGG: tko:TK1395 predicted ATP-dependent endonuclease, OLD family
YP_926989.1	KEGG: ppr:PBPRA1457 omega-3 polyunsaturated fatty acid synthase PfaD
YP_926990.1	KEGG: ppr:PBPRA1458 omega-3 polyunsaturated fatty acid synthase PfaC
YP_926991.1	KEGG: sdn:Sden_2628 omega-3 polyunsaturated fatty acid synthase PfaB
YP_926992.1	KEGG: ppr:PBPRA1460 omega-3 polyunsaturated fatty acid synthase PfaA
YP_926993.1	KEGG: son:SO1603 transcriptional regulator, putative
YP_926995.1	EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene
YP_926996.1	KEGG: sdn:Sden_2625 4'-phosphopantetheinyl transferase
YP_926997.1	catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis
YP_926998.1	putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function
YP_926999.1	KEGG: sdn:Sden_1515 hypothetical protein
YP_927000.1	KEGG: son:SO1611 hypothetical protein
YP_927001.1	KEGG: son:SO1612 hypothetical protein
YP_927002.1	KEGG: son:SO1613 hypothetical protein
YP_927003.1	KEGG: son:SO1614 acetyltransferase, GNAT family
YP_927004.1	KEGG: pae:PA3216 hypothetical protein
YP_927005.1	KEGG: son:SO1617 hypothetical protein
YP_927006.1	KEGG: son:SO1618 hypothetical protein
YP_927007.1	KEGG: sdn:Sden_1545 protein of unknown function DUF446
YP_927008.1	KEGG: shm:Shewmr7_2717 pseudouridylate synthase
YP_927009.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_927010.1	KEGG: son:SO1623 PTS system, glucose-specific IIBC component
YP_927011.1	produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine
YP_927012.1	KEGG: sdn:Sden_1550 hypothetical protein
YP_927013.1	catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway
YP_927014.1	catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein
YP_927015.1	catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn
YP_927016.1	one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit
YP_927017.1	EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu
YP_927018.1	Catalyzes the phosphorylation of UMP to UDP
YP_927019.1	Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs
YP_927020.1	KEGG: son:SO1633 undecaprenyl diphosphate synthase
YP_927021.1	KEGG: sdn:Sden_1559 phosphatidate cytidylyltransferase
YP_927022.1	catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate
YP_927023.1	KEGG: son:SO1636 membrane-associated zinc metalloprotease, putative
YP_927024.1	KEGG: son:SO1637 bacterial surface antigen
YP_927025.1	KEGG: son:SO1638 outer membrane protein OmpH
YP_927026.1	adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis
YP_927027.1	in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP
YP_927028.1	catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis
YP_927029.1	catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM
YP_927030.1	RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids
YP_927031.1	catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase
YP_927032.1	KEGG: son:SO1645 cell cycle protein MesJ
YP_927033.1	KEGG: vvu:VV11783 acetyltransferase
YP_927034.1	KEGG: vvu:VV11782 glutathione synthase
YP_927035.1	KEGG: son:SO1646 GGDEF family protein
YP_927036.1	KEGG: son:SO1647 glutathione-regulated potassium-efflux system protein KefB, putative
YP_927037.1	KEGG: son:SO3155 hypothetical protein
YP_927038.1	catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro)
YP_927039.1	KEGG: syn:sll1673 two-component response regulator
YP_927040.1	KEGG: sdn:Sden_2543 acetyltransferase, CysE/LacA/LpxA/NodL family
YP_927041.1	KEGG: sdn:Sden_2542 protein of unknown function UPF0066
YP_927042.1	KEGG: son:SO3150 lipoprotein, putative
YP_927043.1	KEGG: son:SO3149 hypothetical protein
YP_927044.1	KEGG: ilo:IL1717 secreted enzyme, contains two amidohydrolase related domains
YP_927045.1	KEGG: son:SO3146 DNA-binding protein, H-NS family
YP_927046.1	KEGG: son:SO3145 electron transfer flavoprotein, beta subunit
YP_927047.1	KEGG: son:SO3144 electron transfer flavoprotein, alpha subunit
YP_927048.1	KEGG: sdn:Sden_2537 Na+/H+ antiporter NhaC
YP_927049.1	KEGG: son:SO3142 peptidyl-dipeptidase Dcp
YP_927050.1	catalyzes the formation of thymidine 5'-phosphate from thymidine
YP_927051.1	KEGG: pae:PA5522 probable glutamine synthetase
YP_927052.1	KEGG: sdn:Sden_1362 choline/carnitine/betaine transport
YP_927053.1	KEGG: son:SO1738 hypothetical protein
YP_927054.1	KEGG: son:SO1277 proton-dependent oligopeptide transporter (POT) family protein
YP_927055.1	KEGG: sdn:Sden_0822 beta-lactamase
YP_927056.1	KEGG: son:SO1739 hypothetical protein
YP_927057.1	KEGG: sdn:Sden_0686 hypothetical protein
YP_927058.1	KEGG: son:SO1741 hypothetical protein
YP_927059.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_927060.1	KEGG: son:SO1743 hydrolase, alpha/beta hydrolase fold family
YP_927061.1	Catalyzes the specific recognition and activation of amino acids during peptide synthesis
YP_927062.1	KEGG: ppr:PBPRA1465 steroid dehydrogenase
YP_927063.1	KEGG: son:SO4017 transglycosylase, Slt family
YP_927064.1	KEGG: son:SO1750 ABC transporter, ATP-binding protein
YP_927065.1	KEGG: son:SO1751 hypothetical protein
YP_927066.1	KEGG: son:SO1755 phosphoglucomutase/phosphomannomutase family protein
YP_927067.1	KEGG: son:SO1756 glyoxalase family protein
YP_927068.1	KEGG: son:SO1758 hypothetical protein
YP_927069.1	KEGG: cps:CPS_0238 TonB-dependent receptor
YP_927070.1	KEGG: vfi:VFA1006 transcriptional regulator, GlpR family
YP_927071.1	KEGG: son:SO3120 oxidoreductase, Gfo/Idh/MocA family
YP_927072.1	KEGG: shm:Shewmr7_2601 tagatose-6-phosphate kinase
YP_927073.1	KEGG: vvy:VVA1515 predicted phosphosugar isomerase
YP_927074.1	KEGG: spt:SPA1630 putative ROK-family protein
YP_927075.1	KEGG: son:SO3505 N-acetylglucosamine-6-phosphate deacetylase
YP_927076.1	KEGG: sde:Sde_3038 multiple antibiotic resistance (MarC)-related proteins
YP_927077.1	KEGG: sdn:Sden_2434 pyridoxal-dependent decarboxylase
YP_927078.1	KEGG: sdn:Sden_3015 peptidase M4, thermolysin
YP_927079.1	KEGG: vfi:VF2362 GGDEF family protein
YP_927080.1	KEGG: dar:Daro_1297 hypothetical protein
YP_927082.1	KEGG: sdn:Sden_2616 peptidyl-Lys metalloendopeptidase
YP_927083.1	KEGG: son:SO1776 outer membrane protein precursor MtrB
YP_927084.1	KEGG: son:SO1777 decaheme cytochrome c MtrA
YP_927085.1	KEGG: son:SO1778 decaheme cytochrome c
YP_927086.1	KEGG: son:SO1779 decaheme cytochrome c
YP_927087.1	KEGG: son:SO1779 decaheme cytochrome c
YP_927088.1	KEGG: son:SO1780 decaheme cytochrome c MtrF
YP_927089.1	KEGG: son:SO1781 outer membrane protein, putative
YP_927090.1	KEGG: son:SO1782 decaheme cytochrome c MtrD
YP_927091.1	KEGG: son:SO1783 ferrous iron transport protein A
YP_927092.1	KEGG: son:SO1784 ferrous iron transport protein B
YP_927093.1	catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_927094.1	KEGG: son:SO1787 hypothetical protein
YP_927095.1	KEGG: son:SO1788 tRNA-hydroxylase
YP_927096.1	catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine
YP_927097.1	KEGG: son:SO1790 peptidyl-prolyl cis-trans isomerase B
YP_927098.1	catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA
YP_927099.1	catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate
YP_927100.1	Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer
YP_927101.1	hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates
YP_927102.1	binds and unfolds substrates as part of the ClpXP protease
YP_927103.1	KEGG: son:SO1796 ATP-dependent protease La
YP_927104.1	KEGG: son:SO1797 DNA-binding protein, HU family
YP_927105.1	KEGG: son:SO1798 peptidyl-prolyl cis-trans isomerase D
YP_927106.1	KEGG: yps:YPTB2904 putative uracil-DNA glycosylase
YP_927107.1	enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity
YP_927108.1	KEGG: son:SO1801 peptide ABC transporter, ATP-binding protein
YP_927109.1	KEGG: son:SO1802 peptide ABC transporter, ATP-binding protein
YP_927110.1	KEGG: son:SO1803 peptide ABC transporter, permease protein
YP_927111.1	KEGG: son:SO1804 peptide ABC transporter, permease protein
YP_927112.1	KEGG: son:SO1805 peptide ABC transporter, periplasmic peptide-binding protein
YP_927113.1	KEGG: son:SO1806 psp operon transcriptional activator
YP_927114.1	KEGG: son:SO1807 phage shock protein A
YP_927115.1	acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding
YP_927116.1	KEGG: son:SO1809 phage shock protein C
YP_927117.1	KEGG: son:SO1810 hypothetical ATPase
YP_927118.1	KEGG: son:SO1811 hypothetical protein
YP_927119.1	KEGG: son:SO1812 methionine gamma-lyase
YP_927120.1	KEGG: aci:ACIAD3064 putative DNA uptake protein and/or related DNA-binding protein
YP_927121.1	KEGG: son:SO1814 hypothetical protein
YP_927122.1	KEGG: son:SO1815 histone deacetylase/AcuC/AphA family protein
YP_927123.1	KEGG: son:SO1816 hypothetical protein
YP_927124.1	KEGG: son:SO1817 primosomal replication protein N'', putative
YP_927125.1	KEGG: sdn:Sden_2430 protein of unknown function DUF81
YP_927126.1	helicase involved in DNA repair and perhaps also replication
YP_927127.1	Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C
YP_927128.1	KEGG: son:SO1821 outer membrane porin, putative
YP_927129.1	KEGG: cps:CPS_3757 TonB-dependent receptor
YP_927130.1	KEGG: ccr:CC2818 TPR domain protein
YP_927131.1	KEGG: sdn:Sden_2425 hypothetical protein
YP_927132.1	KEGG: son:SO1825 MotA/TolQ/ExbB proton channel family protein
YP_927133.1	KEGG: sdn:Sden_2423 MotA/TolQ/ExbB proton channel
YP_927134.1	KEGG: sdn:Sden_2422 biopolymer transport protein ExbD/TolR
YP_927135.1	KEGG: sdn:Sden_2421 TonB-like protein
YP_927136.1	KEGG: son:SO1829 TPR domain protein
YP_927137.1	KEGG: son:SO1830 GGDEF domain protein protein
YP_927138.1	KEGG: son:SO1831 hypothetical protein
YP_927139.1	KEGG: son:SO1832 peptidyl-prolyl cis-trans isomerase C
YP_927140.1	KEGG: son:SO1834 acetyltransferase, GNAT family
YP_927141.1	KEGG: sdn:Sden_2510 RNA-binding S4
YP_927142.1	KEGG: sdn:Sden_2509 protein of unknown function DUF1260
YP_927143.1	KEGG: son:SO2846 hypothetical protein
YP_927144.1	KEGG: son:SO2844 exonuclease SbcD, putative
YP_927145.1	KEGG: son:SO2843 exonuclease SbcC, putative
YP_927146.1	KEGG: son:SO2842 peptidase, M23/M37 family
YP_927147.1	KEGG: son:SO2841 hypothetical protein
YP_927148.1	KEGG: son:SO2840 hypothetical protein
YP_927149.1	KEGG: son:SO2839 hypothetical protein
YP_927150.1	KEGG: sdn:Sden_1417 DEAD/DEAH box helicase-like protein
YP_927151.1	KEGG: son:SO2836 hypothetical protein
YP_927152.1	Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates
YP_927153.1	activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions
YP_927154.1	catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate
YP_927155.1	KEGG: sdn:Sden_1448 hypothetical protein
YP_927156.1	KEGG: rba:RB9658 hypothetical protein
YP_927157.1	KEGG: vvy:VV0693 carbon starvation protein
YP_927158.1	unknown function; when overproduced it confers drug-resistance
YP_927159.1	KEGG: son:SO2822 sensor histidine kinase
YP_927160.1	KEGG: ecp:ECP_1849 hypothetical protein YecH
YP_927161.1	KEGG: son:SO2809 RepA domain protein
YP_927162.1	KEGG: son:SO2808 hypothetical protein
YP_927163.1	KEGG: son:SO2807 hypothetical protein
YP_927164.1	KEGG: son:SO2806 hypothetical protein
YP_927165.1	KEGG: son:SO2805 putative uncharacterized protein involved in response to NO
YP_927166.1	KEGG: son:SO2260 extragenic suppressor protein SuhB
YP_927167.1	KEGG: son:SO2261 RNA methyltransferase, TrmH family, group 1
YP_927168.1	KEGG: son:SO2262 serine acetyltransferase
YP_927169.1	KEGG: son:SO2263 Rrf2 family protein
YP_927170.1	catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis
YP_927171.1	KEGG: son:SO2265 NifU family protein
YP_927172.1	KEGG: son:SO2266 HesB/YadR/YfhF family protein
YP_927173.1	J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins
YP_927174.1	involved in the maturation of iron-sulfur cluster-containing proteins
YP_927175.1	KEGG: son:SO2269 ferredoxin, 2Fe-2S
YP_927176.1	KEGG: son:SO2270 ribosomal protein S6 modification protein
YP_927177.1	KEGG: sfr:Sfri_2114 hypothetical protein
YP_927178.1	catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate
YP_927179.1	KEGG: son:SO2005 DksA-type zinc finger protein
YP_927180.1	KEGG: son:SO2006 NifR3/Smm1 family protein
YP_927181.1	KEGG: son:SO2007 hypothetical protein
YP_927182.1	KEGG: sdn:Sden_2386 protein of unknown function DUF692
YP_927183.1	KEGG: sdn:Sden_2385 hypothetical protein
YP_927184.1	KEGG: sdn:Sden_2384 hypothetical protein
YP_927185.1	KEGG: son:SO2011 hypothetical protein
YP_927186.1	KEGG: sdn:Sden_2382 adenine phosphoribosyltransferase
YP_927187.1	KEGG: son:SO2013 DNA polymerase III, gamma and tau subunits
YP_927188.1	KEGG: sdn:Sden_2380 conserved hypothetical protein 103
YP_927189.1	involved in a recombinational process of DNA repair, independent of the recBC complex
YP_927190.1	molecular chaperone
YP_927191.1	KEGG: son:SO2017 putative thioredoxin-like protein
YP_927192.1	essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP
YP_927193.1	protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic
YP_927194.1	KEGG: sdn:Sden_1431 inosine kinase
YP_927195.1	KEGG: vch:VCA0275 IS1004 transposase
YP_927196.1	KEGG: sdn:Sden_2331 sodium:dicarboxylate symporter
YP_927197.1	KEGG: sdn:Sden_2330 Ig-like, group 1
YP_927198.1	catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation
YP_927199.1	catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity
YP_927200.1	KEGG: son:SO2650 hypothetical protein
YP_927201.1	LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation
YP_927202.1	KEGG: son:SO2248 L-serine dehydratase 1
YP_927203.1	hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides
YP_927204.1	KEGG: son:SO2251 conserved hypothetical protein
YP_927205.1	catalyzes the hydrolysis of acylphosphate
YP_927206.1	KEGG: sdn:Sden_1673 hypothetical protein
YP_927207.1	KEGG: son:SO2255 transcription-repair coupling factor
YP_927208.1	KEGG: son:SO2256 hypothetical protein
YP_927209.1	KEGG: son:SO2257 lipoprotein releasing system transmembrane protein LolE
YP_927210.1	KEGG: son:SO2258 lipoprotein releasing system ATP-binding protein LolD
YP_927211.1	KEGG: sdn:Sden_1678 lipoprotein releasing system, transmembrane protein, LolC/E family
YP_927212.1	KEGG: son:SO2804 hypothetical protein
YP_927213.1	KEGG: shm:Shewmr7_2493 DNA internalization-related competence protein ComEC/Rec2
YP_927214.1	KEGG: son:SO2802 ABC transporter, ATP-binding protein MsbA
YP_927215.1	transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate
YP_927216.1	KEGG: son:SO2800 hypothetical protein
YP_927217.1	KEGG: sdn:Sden_2196 hypothetical protein
YP_927218.1	KEGG: pat:Patl_2623 alkylhydroperoxidase like protein, AhpD family
YP_927219.1	KEGG: ilo:IL0786 phosphinothricin N-acetyltransferase, putative
YP_927225.1	KEGG: lpp:lpp2955 hypothetical protein
YP_927226.1	KEGG: vch:VCA0356 hypothetical protein
YP_927228.1	KEGG: pab:PAB0087 related beta-lactamase precursor
YP_927230.1	KEGG: sit:TM1040_2021 hypothetical protein
YP_927232.1	KEGG: son:SO2037 site-specific recombinase, phage integrase family
YP_927233.1	KEGG: son:SO1891 3-oxoacid CoA-transferase subunit B
YP_927234.1	KEGG: son:SO1892 acetate CoA-transferase, subunit A
YP_927235.1	KEGG: she:Shewmr4_2326 pyruvate carboxyltransferase
YP_927236.1	KEGG: son:SO1894 3-methylcrotonyl-CoA carboxylase alpha subunit
YP_927237.1	KEGG: sdn:Sden_2247 enoyl-CoA hydratase/isomerase
YP_927238.1	KEGG: son:SO1896 3-methylcrotonyl-CoA carboxylase beta subunit
YP_927239.1	KEGG: son:SO1897 isovaleryl-CoA dehydrogenase
YP_927240.1	KEGG: son:SO1898 transcriptional regulator, putative
YP_927241.1	KEGG: mag:amb2304 acyl-coenzyme A synthetase/AMP-(fatty) acid ligase
YP_927242.1	catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate
YP_927243.1	KEGG: son:SO1910 1,4-dihydroxy-2-naphthoate octaprenyltransferase
YP_927244.1	KEGG: son:SO1911 oxidoreductase, short chain dehydrogenase/reductase family
YP_927245.1	KEGG: son:SO1912 acyl-CoA thioesterase II
YP_927246.1	KEGG: son:SO1913 hypothetical protein
YP_927247.1	KEGG: son:SO1672 hypothetical protein
YP_927248.1	receptor for colicin S4
YP_927249.1	KEGG: son:SO1674 short chain dehydrogenase family protein
YP_927250.1	KEGG: son:SO1675 hypothetical protein
YP_927251.1	catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis
YP_927252.1	KEGG: son:SO1677 acetyl-CoA acetyltransferase
YP_927253.1	KEGG: son:SO1678 methylmalonate-semialdehyde dehydrogenase
YP_927254.1	KEGG: son:SO1679 acyl-CoA dehydrogenase family protein
YP_927255.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_927256.1	KEGG: son:SO1681 enoyl-CoA hydratase/isomerase family protein
YP_927257.1	KEGG: son:SO1682 3-hydroxyisobutyrate dehydrogenase
YP_927258.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_927259.1	KEGG: sdn:Sden_1936 hypothetical protein
YP_927260.1	KEGG: son:SO1686 prolyl oligopeptidase family protein
YP_927261.1	KEGG: eca:ECA3190 streptogramin A acetyl transferase
YP_927262.1	KEGG: ppr:PBPRB1050 hypothetical protein
YP_927263.1	KEGG: son:SO1690 ABC transporter, ATP-binding protein
YP_927264.1	KEGG: pat:Patl_1937 hypothetical protein
YP_927265.1	KEGG: son:SO3318 transcriptional regulator, LysR family
YP_927266.1	KEGG: son:SO3319 hypothetical protein
YP_927267.1	KEGG: vpa:VPA0042 hypothetical protein
YP_927268.1	KEGG: vpa:VPA0465 putative NAD(P)H oxidoreductase
YP_927269.1	KEGG: vpa:VPA0464 putative TrkA family protein
YP_927270.1	KEGG: son:SO1715 hypothetical protein
YP_927271.1	KEGG: pat:Patl_2402 TonB-dependent receptor, plug
YP_927272.1	KEGG: vpa:VPA0219 hypothetical protein
YP_927273.1	KEGG: cps:CPS_3716 glycosyl hydrolase, family 16
YP_927274.1	KEGG: sdn:Sden_2610 TonB-dependent receptor
YP_927275.1	KEGG: vvu:VV12807 hypothetical protein
YP_927276.1	KEGG: sdn:Sden_2610 TonB-dependent receptor
YP_927277.1	KEGG: sdn:Sden_2609 periplasmic binding protein/LacI transcriptional regulator
YP_927278.1	KEGG: sdn:Sden_2608 sugar (glycoside-Pentoside-Hexuronide) transporter
YP_927279.1	KEGG: sdn:Sden_2607 beta-glucosidase
YP_927280.1	KEGG: sdn:Sden_2027 glucose/galactose transporter
YP_927281.1	KEGG: sdn:Sden_2605 beta-glucosidase
YP_927282.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_927283.1	KEGG: sdn:Sden_1682 protein of unknown function DUF6, transmembrane
YP_927284.1	KEGG: son:SO1722 ACT domain protein
YP_927285.1	KEGG: son:SO1723 phosphate ABC transporter, permease protein, putative
YP_927286.1	KEGG: son:SO1724 phosphate ABC transporter, permease protein, putative
YP_927287.1	ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation
YP_927288.1	regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon
YP_927289.1	KEGG: son:SO1736 hypothetical protein
YP_927290.1	KEGG: son:SO0883 hypothetical protein
YP_927291.1	KEGG: rme:Rmet_5065 hypothetical protein
YP_927292.1	KEGG: sdn:Sden_2195 beta-lactamase-like protein
YP_927293.1	KEGG: vpa:VPA0991 hypothetical protein
YP_927294.1	KEGG: vpa:VPA0990 hypothetical protein
YP_927295.1	KEGG: noc:Noc_1911 two component sigma-54 specific, transcriptional regulator, fis family
YP_927296.1	KEGG: son:SO1923 AcrB/AcrD/AcrF family protein
YP_927297.1	KEGG: son:SO1924 AcrB/AcrD/AcrF family protein
YP_927298.1	KEGG: son:SO1925 HlyD family secretion protein
YP_927299.1	type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH
YP_927300.1	KEGG: son:SO1927 succinate dehydrogenase, cytochrome b556 subunit
YP_927301.1	KEGG: sdn:Sden_2186 succinate dehydrogenase, cytochrome b subunit
YP_927302.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol
YP_927303.1	part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase
YP_927304.1	SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide
YP_927305.1	KEGG: son:SO1931 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase)
YP_927306.1	catalyzes the interconversion of succinyl-CoA and succinate
YP_927307.1	KEGG: son:SO1933 succinyl-CoA synthetase alpha chain
YP_927308.1	KEGG: sdn:Sden_2179 auxin efflux carrier
YP_927309.1	KEGG: sdn:Sden_1591 GCN5-related N-acetyltransferase
YP_927310.1	KEGG: son:SO1935 regulator of nucleoside diphosphate kinase
YP_927311.1	negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer
YP_927312.1	Modulates the activities of several enzymes which are inactive in their acetylated form
YP_927313.1	KEGG: son:SO1939 hypothetical protein
YP_927314.1	KEGG: son:SO2741 adenosylmethionine-8-amino-7-oxononanoate aminotransferase
YP_927315.1	KEGG: son:SO2740 biotin synthase
YP_927316.1	KEGG: she:Shewmr4_2358 8-amino-7-oxononanoate synthase
YP_927317.1	KEGG: son:SO2738 biotin synthesis protein BioC
YP_927318.1	DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium
YP_927319.1	alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family
YP_927320.1	putative metalloprotease
YP_927321.1	KEGG: son:SO2727 cytochrome c3
YP_927322.1	KEGG: pha:PSHAa2962 hypothetical protein
YP_927323.1	KEGG: sdn:Sden_2327 regulatory protein, LuxR
YP_927324.1	KEGG: son:SO2724 protease, putative
YP_927325.1	KEGG: son:SO2723 HIT family protein
YP_927326.1	KEGG: sdn:Sden_2324 phenylacetic acid degradation-related protein
YP_927327.1	KEGG: son:SO2720 hypothetical protein
YP_927328.1	KEGG: son:SO2715 TonB-dependent receptor
YP_927329.1	KEGG: son:SO2714 hypothetical protein
YP_927330.1	KEGG: son:SO2713 transporter, putative
YP_927331.1	KEGG: sdn:Sden_2318 aminoglycoside phosphotransferase
YP_927332.1	KEGG: sdn:Sden_2317 hypothetical protein
YP_927333.1	KEGG: son:SO2710 hypothetical protein
YP_927334.1	KEGG: son:SO2708 nitroreductase family protein
YP_927335.1	KEGG: vvy:VV2889 uncharacterized flavoprotein
YP_927336.1	KEGG: vvy:VV2888 methyl-accepting chemotaxis protein
YP_927337.1	KEGG: son:SO2707 acetyltransferase, GNAT family
YP_927338.1	KEGG: son:SO3563 SM-20 domain protein
YP_927339.1	KEGG: rba:RB5189 hypothetical protein-transmembrane prediction
YP_927340.1	KEGG: bja:bll5078 hypothetical protein
YP_927341.1	KEGG: 5-oxo-L-prolinase, putative
YP_927342.1	KEGG: son:SO2850 acetyltransferase, GNAT family
YP_927343.1	KEGG: son:SO2848 hypothetical protein
YP_927345.1	KEGG: mxa:MXAN_4199 putative macrolide efflux ABC transporter, ATP-binding protein
YP_927346.1	KEGG: pae:PA4591 hypothetical protein
YP_927347.1	KEGG: dvu:DVU2439 efflux transporter, RND family, MFP subunit
YP_927348.1	KEGG: ttj:TTHA1006 HlyD family secretion protein
YP_927349.1	KEGG: tel:tll1383 ABC transporter permease protein
YP_927350.1	KEGG: son:SO1839 hypothetical protein
YP_927351.1	KEGG: son:SO1840 hypothetical protein
YP_927352.1	KEGG: bpe:BP0459 hypothetical protein
YP_927353.1	KEGG: son:SO1843 hypothetical protein
YP_927354.1	KEGG: sdn:Sden_2272 endonuclease/exonuclease/phosphatase
YP_927355.1	KEGG: vvy:VVA1362 arsenite efflux pump ACR3
YP_927356.1	KEGG: son:SO2062 hypothetical protein
YP_927357.1	KEGG: son:SO2063 hypothetical protein
YP_927358.1	KEGG: son:SO2064 hypothetical protein
YP_927359.1	KEGG: pae:PA5523 glutamate-1-semialdehyde 2,1-aminomutase, putative
YP_927360.1	KEGG: son:SO2929 hypothetical protein
YP_927361.1	KEGG: cps:CPS_0402 hypothetical protein
YP_927362.1	KEGG: sfr:Sfri_2568 arylesterase
YP_927363.1	KEGG: son:SO2927 ABC transporter, ATP-binding protein
YP_927364.1	KEGG: son:SO2926 ABC transporter, permease, putative
YP_927365.1	KEGG: sdn:Sden_2362 hypothetical protein
YP_927366.1	catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate
YP_927367.1	KEGG: son:SO2920 hypothetical protein
YP_927368.1	KEGG: sdn:Sden_2359 hypothetical protein
YP_927369.1	KEGG: shm:Shewmr7_1552 hypothetical protein
YP_927370.1	KEGG: son:SO2917 hypothetical protein
YP_927371.1	catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate
YP_927372.1	AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA
YP_927373.1	KEGG: son:SO2914 hypothetical protein
YP_927374.1	activates pyruvate formate-lyase 1 under anaerobic conditions
YP_927375.1	KEGG: son:SO2912 formate acetyltransferase
YP_927376.1	KEGG: sdn:Sden_2405 hypothetical protein
YP_927377.1	KEGG: ppr:PBPRA2766 hypothetical formate transporter 1
YP_927378.1	KEGG: vch:VCA0542 transcriptional regulator, LysR family
YP_927379.1	KEGG: vpa:VPA1014 putative S-transferase
YP_927380.1	KEGG: vvy:VV0250 outer membrane receptor protein
YP_927381.1	KEGG: son:SO2906 hypothetical protein
YP_927382.1	KEGG: son:SO2905 O-methyltransferase, putative
YP_927383.1	KEGG: cps:CPS_0838 aminotransferase, class V
YP_927384.1	KEGG: psp:PSPPH_3872 transcriptional regulator, TetR family
YP_927385.1	KEGG: son:SO2903 cysteine synthase A
YP_927386.1	KEGG: son:SO2902 hypothetical protein
YP_927387.1	catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_927388.1	KEGG: sfr:Sfri_2466 diguanylate cyclase
YP_927389.1	KEGG: son:SO2900 hypothetical protein
YP_927390.1	putative role in sulfur assimilation
YP_927391.1	KEGG: son:SO2898 SMC family protein
YP_927392.1	KEGG: son:SO2897 cell division protein ZipA
YP_927393.1	KEGG: son:SO2896 DNA ligase, NAD-dependent
YP_927394.1	KEGG: cps:CPS_2237 microbial collagenase
YP_927395.1	KEGG: son:SO2863 hypothetical protein
YP_927396.1	KEGG: son:SO2862 HDIG domain protein
YP_927397.1	KEGG: sdn:Sden_2511 NAD-dependent epimerase/dehydratase
YP_927398.1	KEGG: son:SO2860 thiol:disulfide interchange protein, DsbA family
YP_927399.1	KEGG: son:SO2858 hypothetical protein
YP_927400.1	KEGG: son:SO2857 sodium/solute symporter family protein
YP_927401.1	KEGG: son:SO2856 CBS domain protein
YP_927402.1	KEGG: son:SO2855 exonuclease
YP_927403.1	KEGG: son:SO2854 hypothetical protein
YP_927404.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis
YP_927405.1	KEGG: son:SO2852 transcriptional regulator, GntR family
YP_927406.1	KEGG: cps:CPS_1451 fatty aldehyde dehydrogenase
YP_927407.1	KEGG: hch:HCH_03167 proline racemase
YP_927408.1	KEGG: cps:CPS_1449 dihydrodipicolinate synthetase family protein
YP_927409.1	KEGG: cps:CPS_1453 putative proline racemase
YP_927410.1	KEGG: cps:CPS_1447 putative D-amino acid dehydrogenase, small subunit
YP_927411.1	KEGG: mca:MCA2770 xaa-pro aminopeptidase
YP_927412.1	Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate
YP_927413.1	KEGG: son:SO1940 hypothetical protein
YP_927414.1	KEGG: son:SO1941 magnesium and cobalt transport protein CorA
YP_927415.1	KEGG: ppr:PBPRA0237 hypothetical protein
YP_927416.1	KEGG: son:SO1942 HDIG domain protein
YP_927417.1	KEGG: son:SO1944 hypothetical protein
YP_927418.1	KEGG: son:SO1945 sensor protein PhoQ
YP_927419.1	KEGG: son:SO1946 transcriptional regulatory protein PhoP
YP_927420.1	KEGG: cps:CPS_3309 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein
YP_927421.1	KEGG: sdn:Sden_1898 ABC transporter related
YP_927422.1	KEGG: sdn:Sden_1897 binding-protein-dependent transport systems inner membrane component
YP_927423.1	KEGG: son:SO1947 hypothetical protein
YP_927425.1	KEGG: sdn:Sden_1365 ATP-binding region, ATPase-like protein
YP_927426.1	KEGG: sdn:Sden_1366 sigma-54 factor, interaction region
YP_927427.1	KEGG: son:SO0765 threonine efflux protein, putative
YP_927428.1	KEGG: son:SO0766 transcriptional regulator, AraC/XylS family
YP_927429.1	catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers
YP_927430.1	KEGG: sdn:Sden_1434 hypothetical protein
YP_927431.1	KEGG: sdn:Sden_1435 GGDEF domain protein
YP_927432.1	KEGG: son:SO2175 hypothetical protein
YP_927433.2	KEGG: sdn:Sden_2336 protein of unknown function DUF1414
YP_927434.1	KEGG: sdn:Sden_2335 37kDa nucleoid-associated protein
YP_927435.1	KEGG: hch:HCH_06888 hypothetical protein
YP_927436.1	KEGG: sdn:Sden_2379 hypothetical protein
YP_927437.1	KEGG: son:SO2180 peptidase, M23/M37 family
YP_927438.1	KEGG: vch:VCA0275 IS1004 transposase
YP_927439.1	KEGG: vfi:VF1328 ferrichrome-binding protein
YP_927440.1	periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate
YP_927441.1	KEGG: sdn:Sden_1597 peptidyl-dipeptidase DCP
YP_927442.1	KEGG: cps:CPS_1363 putative dipeptidase
YP_927443.1	KEGG: sdn:Sden_1655 gamma-glutamyltransferase
YP_927444.1	KEGG: son:SO1954 transporter, LysE family
YP_927445.1	KEGG: sdn:Sden_2163 4-hydroxyphenylpyruvate dioxygenase
YP_927446.1	KEGG: son:SO1963 homogentisate 1,2-dioxygenase
YP_927447.1	KEGG: son:SO1965 transcriptional regulator, LysR family
YP_927448.1	KEGG: son:SO1966 conserved hypothetical protein TIGR00266
YP_927449.1	KEGG: son:SO1968 hypothetical protein
YP_927450.1	KEGG: son:SO1969 hypothetical protein
YP_927451.1	KEGG: son:SO1973 hypothetical ABC transporter protein
YP_927452.1	KEGG: son:SO1977 hypothetical protein
YP_927453.1	KEGG: son:SO1978 hypothetical protein
YP_927454.1	KEGG: sdn:Sden_2145 hypothetical protein
YP_927455.1	KEGG: vvy:VVA1412 small-conductance mechanosensitive channel
YP_927456.1	KEGG: sdn:Sden_1716 mammalian cell entry related
YP_927457.1	KEGG: sdn:Sden_1717 paraquat-inducible protein A
YP_927458.1	KEGG: sdn:Sden_1718 paraquat-inducible protein A
YP_927459.1	KEGG: son:SO2604 hypothetical protein
YP_927460.1	KEGG: sdn:Sden_1720 GAF domain-containing protein
YP_927461.1	affects solute and DNA transport through an unknown mechanism
YP_927462.1	Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3
YP_927463.1	KEGG: son:SO2600 aminopeptidase N
YP_927464.1	KEGG: son:SO2598 hypothetical protein
YP_927465.1	KEGG: son:SO2597 hypothetical protein
YP_927466.1	KEGG: son:SO2596 hypothetical protein
YP_927467.1	KEGG: son:SO2595 BNR repeat protein
YP_927468.1	KEGG: son:SO2594 hypothetical protein
YP_927469.1	KEGG: son:SO2593 hypothetical protein
YP_927470.1	catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors
YP_927471.1	KEGG: son:SO2591 hypothetical protein
YP_927472.1	KEGG: sdn:Sden_0276 hypothetical protein
YP_927473.1	KEGG: son:SO2518 hypothetical protein
YP_927474.1	KEGG: vvy:VV1099 transglutaminase-like enzyme
YP_927475.1	KEGG: vpa:VP2146 putative oxidoreductase protein
YP_927476.1	KEGG: pat:Patl_0406 hypothetical protein
YP_927477.1	catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA
YP_927478.1	KEGG: son:SO1852 hypothetical protein
YP_927479.1	Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth
YP_927480.1	KEGG: son:SO1854 hypothetical protein
YP_927481.1	KEGG: son:SO1855 ribosome modulation factor
YP_927482.1	catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP
YP_927483.1	KEGG: son:SO1857 hypothetical ATP-dependent protease
YP_927484.1	in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system
YP_927485.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision
YP_927486.1	KEGG: son:SO1862 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_927487.1	KEGG: noc:Noc_0649 DNA topoisomerase I
YP_927488.1	KEGG: son:SO1863 DNA-binding protein, HU family
YP_927489.1	KEGG: sdn:Sden_1501 peptidoglycan-binding domain 1
YP_927490.1	KEGG: son:SO2110 hypothetical protein
YP_927491.1	the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response
YP_927492.1	KEGG: son:SO2113 hypothetical protein
YP_927493.1	KEGG: son:SO2114 hypothetical protein
YP_927494.1	KEGG: son:SO2115 asparaginase family protein
YP_927495.1	KEGG: son:SO2228 CBS domain protein
YP_927496.1	KEGG: son:SO2229 ATP-dependent helicase HrpA
YP_927497.1	KEGG: sdn:Sden_1495 periplasmic nitrate reductase NapE
YP_927498.1	KEGG: sdn:Sden_1496 NapD
YP_927499.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_927500.1	KEGG: sdn:Sden_1498 nitrate reductase cytochrome c-type subunit (NapB)
YP_927501.1	KEGG: sdn:Sden_1499 periplasmic nitrate reductase C-type cytochrome, NapC/NirT
YP_927502.1	KEGG: sdn:Sden_1057 hypothetical protein
YP_927503.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_927504.2	KEGG: sdn:Sden_1055 arginine N-succinyltransferase
YP_927505.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate
YP_927506.1	KEGG: sdn:Sden_1053 regulatory proteins, AsnC/Lrp
YP_927507.1	KEGG: psp:PSPPH_4620 transcriptional regulator, LysR family
YP_927508.1	KEGG: sru:SRU_0722 histidine ammonia-lyase
YP_927509.1	catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism
YP_927510.1	KEGG: son:SO2037 site-specific recombinase, phage integrase family
YP_927513.1	KEGG: cps:CPS_4885 acetyltransferase, GNAT family
YP_927514.1	KEGG: sdn:Sden_2135 hypothetical protein
YP_927515.1	CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS
YP_927516.1	KEGG: son:SO2477 alcohol dehydrogenase, iron-containing
YP_927517.1	KEGG: son:SO2476 polysaccharide biosynthesis protein
YP_927518.1	KEGG: son:SO2474 carbonic anhydrase family protein
YP_927519.1	KEGG: sde:Sde_0340 hypothetical protein
YP_927520.1	KEGG: sde:Sde_0341 gram negative topoisomerase IV, subunit B
YP_927521.1	KEGG: shm:Shewmr7_2123 alpha/beta hydrolase fold
YP_927522.1	KEGG: son:SO2472 D-alanyl-D-alanine carboxypeptidase-related protein
YP_927523.1	dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.
YP_927524.1	KEGG: sdn:Sden_1815 hypothetical protein
YP_927525.1	functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose
YP_927526.1	KEGG: son:SO2237 phosphotransferase system, enzyme I
YP_927527.1	KEGG: son:SO2238 phosphocarrier protein HPr
YP_927528.1	KEGG: son:SO2239 hypothetical protein
YP_927529.1	KEGG: son:SO2240 methyl-accepting chemotaxis protein
YP_927530.1	KEGG: son:SO2241 hypothetical protein
YP_927531.1	KEGG: son:SO2244 transcriptional regulator, LacI family
YP_927532.1	KEGG: son:SO2459 glucoamylase
YP_927533.1	KEGG: she:Shewmr4_1870 major facilitator superfamily MFS_1
YP_927534.1	KEGG: pat:Patl_2431 negative transcriptional regulator
YP_927535.1	KEGG: pha:PSHAa1355 glycosidase
YP_927536.1	KEGG: sdn:Sden_2031 alpha amylase, catalytic region
YP_927537.1	KEGG: son:SO2162 TonB dependent receptor-related protein
YP_927538.1	KEGG: sdn:Sden_2028 alpha amylase, catalytic region
YP_927539.1	KEGG: sdn:Sden_2027 glucose/galactose transporter
YP_927540.1	KEGG: vvy:VVA1664 tRNA and rRNA cytosine-C5-methylase
YP_927541.1	KEGG: vvu:VV11395 hypothetical protein
YP_927542.1	KEGG: sde:Sde_2637 cell wall hydrolase/autolysin
YP_927543.1	KEGG: vpa:VPA0700 hypothetical protein
YP_927544.1	KEGG: vvy:VV2684 GGDEF family protein
YP_927545.1	KEGG: son:SO2089 hydrogenase expression/formation protein HypA
YP_927546.1	KEGG: son:SO2090 hydrogenase expression/formation protein HypE
YP_927547.1	KEGG: son:SO2091 hydrogenase expression/formation protein HypD
YP_927548.1	KEGG: son:SO2092 hydrogenase assembly chaperone hypC/hupF
YP_927549.1	KEGG: son:SO2093 hydrogenase accessory protein HypB
YP_927550.1	KEGG: son:SO2094 hydrogenase maturation protein HypF
YP_927551.1	KEGG: son:SO2095 hypothetical protein
YP_927552.1	KEGG: son:SO2096 hydrogenase expression/formation protein
YP_927553.1	KEGG: son:SO2097 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit
YP_927554.1	KEGG: son:SO2098 hydrogenase large chain
YP_927555.1	KEGG: son:SO2099 hydrogenase small chain
YP_927556.1	KEGG: son:SO2100 thioredoxin family protein
YP_927557.1	KEGG: son:SO2101 lipoprotein, putative
YP_927558.1	KEGG: son:SO2102 hypothetical protein
YP_927559.1	KEGG: she:Shewmr4_1826 ApbE family lipoprotein
YP_927560.1	catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_927561.1	KEGG: sdn:Sden_1957 hypothetical protein
YP_927562.1	KEGG: son:SO2220 MutT/nudix family protein
YP_927563.1	KEGG: son:SO2221 para-aminobenzoate synthase, component I
YP_927564.1	KEGG: son:SO2222 fumarate hydratase, class I, anaerobic, putative
YP_927565.1	KEGG: son:SO2223 peptidase, putative
YP_927566.1	KEGG: pat:Patl_1146 hypothetical protein
YP_927567.1	involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan
YP_927568.1	necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space
YP_927569.1	KEGG: son:SO2136 aldehyde-alcohol dehydrogenase
YP_927570.1	KEGG: son:SO2137 multiple antibiotic resistance protein
YP_927571.1	dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate
YP_927572.1	KEGG: son:SO2484 hypothetical protein
YP_927573.1	broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor
YP_927574.1	KEGG: son:SO2481 hypothetical protein
YP_927575.1	Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA
YP_927576.1	KEGG: son:SO2329 hypothetical protein
YP_927577.1	An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group
YP_927578.1	KEGG: son:SO2331 hypothetical protein
YP_927579.1	KEGG: son:SO2332 hypothetical protein
YP_927580.1	KEGG: son:SO2333 hydrolase, alpha/beta fold family
YP_927581.1	negative modulator of the initiation of chromosome replication
YP_927582.1	catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate
YP_927583.1	KEGG: son:SO2337 peptide methionine sulfoxide reductase
YP_927584.1	catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism
YP_927585.1	KEGG: son:SO2339 alpha keto acid dehydrogenase complex, E1 component, alpha subunit
YP_927586.1	KEGG: son:SO2340 alpha keto acid dehydrogenase complex, E1 component, beta subunit
YP_927587.1	KEGG: son:SO2341 alpha keto acid dehydrogenase complex, E2 component
YP_927588.1	3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate
YP_927589.1	KEGG: cps:CPS_1937 methyl-accepting chemotaxis protein
YP_927590.1	KEGG: vfi:VFA0358 acriflavin resistance periplasmic protein
YP_927591.1	KEGG: vvy:VVA0535 transporter, AcrB/D/F family
YP_927592.1	KEGG: son:SO2570 lipoprotein, putative
YP_927593.1	KEGG: son:SO2426 DNA-binding response regulator
YP_927594.1	KEGG: son:SO2424 zinc carboxypeptidase domain protein
YP_927595.1	KEGG: son:SO2423 hypothetical protein
YP_927596.1	KEGG: son:SO2422 hypothetical protein
YP_927597.1	converts asparagine to aspartate and ammonia
YP_927598.1	KEGG: son:SO2420 signal peptide peptidase SppA, 67K type
YP_927599.1	KEGG: sdn:Sden_1900 NADH:flavin oxidoreductase/NADH oxidase
YP_927600.1	KEGG: mxa:MXAN_5255 hypothetical protein
YP_927601.1	KEGG: son:SO2417 iron-sulfur cluster-binding protein
YP_927602.1	B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA
YP_927603.1	Catalyzes the rate-limiting step in dNTP synthesis
YP_927604.1	KEGG: son:SO2414 phosphoglycolate phosphatase
YP_927605.1	Involved in ubiquinone biosynthesis
YP_927606.1	KEGG: son:SO2411 DNA gyrase subunit A
YP_927607.1	catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine
YP_927608.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_927609.1	catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis
YP_927610.1	Catalyzes the formation of (d)CDP from ATP and (d)CMP
YP_927611.1	in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins
YP_927612.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_927613.1	KEGG: son:SO2400 hypothetical protein
YP_927614.1	KEGG: son:SO2399 hypothetical protein
YP_927615.1	type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase
YP_927616.1	KEGG: sdn:Sden_1758 short-chain dehydrogenase/reductase SDR
YP_927617.1	KEGG: son:SO2396 hypothetical protein
YP_927618.1	KEGG: son:SO2395 acyl-CoA dehydrogenase family protein
YP_927619.1	KEGG: son:SO2394 penicillin-binding protein 4
YP_927620.1	KEGG: son:SO2393 hypothetical protein
YP_927621.1	KEGG: vpa:VP0563 hypothetical protein
YP_927622.1	catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome
YP_927623.1	KEGG: sdn:Sden_1780 hypothetical protein
YP_927624.1	KEGG: sdn:Sden_2951 protein of unknown function DUF839
YP_927625.1	KEGG: sdn:Sden_1781 putative orphan protein
YP_927626.1	KEGG: pha:PSHAa1736 hypothetical protein
YP_927627.1	KEGG: pha:PSHAa0289 hypothetical protein
YP_927628.1	member of the SPOUT superfamily of methyltransferases
YP_927629.1	serine protease inhibitor, inhibits trypsin and other proteases
YP_927630.1	KEGG: son:SO2045 cation efflux family protein
YP_927631.1	KEGG: dde:Dde_2977 transcriptional regulator, MarR family
YP_927632.1	KEGG: son:SO2047 prolyl oligopeptidase family protein
YP_927633.1	KEGG: son:SO2048 membrane protein, putative
YP_927634.1	KEGG: sdn:Sden_1878 GGDEF domain protein
YP_927635.1	KEGG: son:SO2116 acetyltransferase, GNAT family
YP_927636.1	KEGG: shm:Shewmr7_2025 MATE efflux family protein
YP_927637.1	catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine
YP_927638.1	KEGG: son:SO2297 hypothetical protein
YP_927639.1	KEGG: pat:Patl_2501 short-chain dehydrogenase/reductase SDR
YP_927640.1	catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_927641.1	KEGG: son:SO2300 translation initiation factor IF-3
YP_927642.1	KEGG: son:SO2301 50S ribosomal protein L35
YP_927643.1	binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit
YP_927644.1	KEGG: son:SO2303 thioredoxin reductase
YP_927645.1	KEGG: sdn:Sden_1741 alanine dehydrogenase
YP_927646.1	mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system
YP_927647.1	KEGG: son:SO2306 cell division protein FtsK, putative
YP_927648.1	KEGG: son:SO2307 outer membrane lipoprotein carrier protein LolA
YP_927649.1	KEGG: son:SO2308 ATPase, AAA family
YP_927650.1	may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling
YP_927651.1	catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_927652.1	KEGG: shm:Shewmr7_2008 hypothetical protein
YP_927653.1	KEGG: sdn:Sden_1805 DsrC-like protein
YP_927654.1	KEGG: son:SO2378 putative uncharacterized protein involved in oxidation of intracellular sulfur
YP_927655.1	KEGG: son:SO2377 putative uncharacterized protein involved in oxidation of intracellular sulfur
YP_927656.1	KEGG: son:SO2376 DsrE-related protein
YP_927657.1	KEGG: son:SO2375 membrane protein, putative
YP_927658.1	KEGG: son:SO2374 transcriptional regulator, LysR family
YP_927659.1	uncharacterized member of the major facilitator superfamily (MFS)
YP_927660.1	KEGG: cps:CPS_1915 transcriptional regulator, MerR family
YP_927661.1	KEGG: cps:CPS_1916 copper-translocating P-type ATPase
YP_927662.1	KEGG: rso:RSc3349 hypothetical protein
YP_927663.1	KEGG: sdn:Sden_1854 hypothetical protein
YP_927664.1	KEGG: son:SO2366 response regulator
YP_927665.1	KEGG: son:SO2365 hypothetical protein
YP_927666.1	CcoN; FixN
YP_927667.1	CcoO; FixO
YP_927668.1	KEGG: son:SO2362 cytochrome c oxidase, cbb3-type, CcoQ subunit
YP_927669.1	KEGG: son:SO2361 cytochrome c oxidase, cbb3-type, subunit III
YP_927670.1	KEGG: son:SO2360 hypothetical protein
YP_927671.1	KEGG: son:SO2359 cation transport ATPase, E1-E2 family
YP_927672.1	KEGG: son:SO2358 cytochrome oxidase maturation protein, cbb3-type
YP_927673.1	KEGG: son:SO2357 hypothetical protein
YP_927674.1	Global transcription factor that controls the expression of over 100 target genes in response to anoxia
YP_927675.1	with UspC and UspD is involved in resistance to UV irradiation
YP_927676.1	TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs
YP_927677.1	KEGG: son:SO2353 hypothetical protein
YP_927678.1	KEGG: son:SO2352 bax protein, putative
YP_927679.1	KEGG: son:SO2351 hypothetical protein
YP_927680.1	catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate
YP_927681.1	catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent
YP_927682.1	KEGG: son:SO2346 hypothetical protein
YP_927683.1	KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase
YP_927684.1	catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate
YP_927685.1	catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate
YP_927686.1	KEGG: shm:Shewmr7_1930 6-phosphogluconolactonase
YP_927687.1	catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate
YP_927688.1	Represses the expression of the zwf, eda, glp and gap
YP_927689.1	KEGG: son:SO2491 pyruvate kinase II
YP_927690.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_927691.1	KEGG: son:SO2493 transcriptional regulator, TetR family
YP_927692.1	KEGG: sfr:Sfri_1887 peptidyl-dipeptidase A
YP_927693.1	KEGG: son:SO2495 Smr domain protein
YP_927694.1	KEGG: son:SO2495.1 hypothetical protein
YP_927695.1	KEGG: sdn:Sden_2119 metal-binding protein
YP_927696.1	KEGG: son:SO2498 sensory box protein
YP_927697.1	KEGG: son:SO2499 hypothetical protein
YP_927698.1	KEGG: sdn:Sden_2012 hypothetical protein
YP_927699.1	KEGG: sdn:Sden_2013 pyridoxal-5'-phosphate-dependent enzyme, beta subunit
YP_927700.1	KEGG: sdn:Sden_2014 radical activating enzyme
YP_927701.1	KEGG: son:SO2503 ExsB protein
YP_927702.1	KEGG: son:SO2504 hypothetical protein
YP_927703.1	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion
YP_927704.1	KEGG: son:SO2507 GGDEF domain protein protein
YP_927705.1	KEGG: son:SO2508 RnfAE/NqrDE family protein
YP_927706.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_927707.1	part of membrane-bound complex thought to be involved in electron transport to nitrogen
YP_927708.1	RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents
YP_927709.1	KEGG: son:SO2512 electron transport complex protein RnfG
YP_927710.1	in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase
YP_927711.1	KEGG: son:SO2514 endonuclease III
YP_927712.1	KEGG: son:SO2044 lactoylglutathione lyase
YP_927713.1	KEGG: son:SO2427 TonB-dependent receptor, putative
YP_927714.1	promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration
YP_927715.1	plays an essential role in ATP-dependent branch migration of the Holliday junction
YP_927716.1	endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity
YP_927717.1	KEGG: sdn:Sden_1886 protein of unknown function DUF28
YP_927718.1	catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes
YP_927719.1	KEGG: son:SO2434 extracellular solute-binding proteins, family 3/GGDEF domain protein protein
YP_927720.1	KEGG: son:SO2435 methyltransferase, putative
YP_927721.1	KEGG: son:SO2436 methyltransferase, putative
YP_927722.1	KEGG: sdn:Sden_1891 protein of unknown function DUF785
YP_927723.1	KEGG: sdn:Sden_1892 gonadoliberin III-related protein
YP_927724.1	KEGG: sdn:Sden_1893 alpha-L-glutamate ligase-related protein
YP_927725.1	KEGG: son:SO2437 hypothetical protein
YP_927726.1	KEGG: sdn:Sden_1895 hypothetical protein
YP_927727.1	KEGG: son:SO2438 transcriptional regulator, LysR family
YP_927728.1	KEGG: son:SO2439 SrpA-related protein
YP_927729.1	KEGG: son:SO2439.2 hypothetical methyl-accepting chemotaxis protein
YP_927730.1	in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center
YP_927731.1	functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate
YP_927732.1	KEGG: sdn:Sden_1773 thiamine biosynthesis protein ThiS
YP_927733.1	KEGG: son:SO2443 thiF protein, putative
YP_927734.1	KEGG: son:SO2444 phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase
YP_927735.1	required for the synthesis of the hydromethylpyrimidine moiety of thiamine
YP_927736.1	KEGG: she:Shewmr4_1880 hypothetical protein
YP_927737.1	KEGG: son:SO2447 channel protein, hemolysin III family subfamily
YP_927738.1	KEGG: vpa:VP2036 putative DNA polymerase III alpha chain
YP_927739.1	KEGG: pen:PSEEN2414 nucleotidyltransferase/DNA polymerase involved in DNA repair
YP_927740.1	KEGG: pat:Patl_0036 hypothetical protein
YP_927741.1	KEGG: vpa:VPA0149 putative two-component system sensor kinase
YP_927742.1	KEGG: sdn:Sden_1767 methylated-DNA-(protein)-cysteine S-methyltransferase
YP_927743.1	KEGG: son:SO2533 hypothetical protein
YP_927744.1	KEGG: son:SO2535 hypothetical amidotransferase
YP_927745.1	functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA
YP_927746.1	KEGG: son:SO2537 sodium/hydrogen exchanger family protein
YP_927747.1	KEGG: mxa:MXAN_6150 sensor histidine kinase
YP_927748.1	KEGG: mxa:MXAN_6149 DNA-binding response regulator, LuxR family
YP_927751.1	KEGG: sdn:Sden_3290 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_927752.1	KEGG: abo:ABO_2082 transposase, putative
YP_927753.1	KEGG: son:SOA0129 transposase, IS3 family
YP_927754.1	KEGG: son:SO2557 hypothetical protein
YP_927755.1	KEGG: son:SO2559 DNA polymerase III, epsilon subunit
YP_927756.1	An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids
YP_927757.1	KEGG: son:SO2561 transcriptional regulator, LysR family
YP_927758.1	KEGG: son:SO2562 hypothetical protein
YP_927759.1	KEGG: bbr:BB4280 probable hydroxyacylglutathione hydrolase
YP_927760.1	KEGG: son:SO2564 transglycosylase, Slt family
YP_927761.1	KEGG: sdn:Sden_2023 intracellular proteinase inhibitor domain protein
YP_927762.1	KEGG: son:SO2566 AsmA protein
YP_927763.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_927764.1	KEGG: son:SO2569 hypothetical protein
YP_927765.1	KEGG: vvy:VV2031 hypothetical protein
YP_927766.1	KEGG: vch:VC1370 GGDEF family protein
YP_927767.1	in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme
YP_927768.1	in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ
YP_927769.1	KEGG: son:SO2041 hypothetical protein
YP_927770.1	KEGG: son:SO2040 soluble lytic murein transglycosylase, putative
YP_927771.1	KEGG: son:SO2039 hypothetical protein
YP_927772.1	KEGG: son:SO2153 MoxR protein
YP_927773.1	KEGG: son:SO2151 hypothetical protein
YP_927774.1	KEGG: son:SO2150 transglutaminase family protein
YP_927775.1	KEGG: son:SO2149 exodeoxyribonuclease V, gamma subunit
YP_927776.1	KEGG: son:SO2148 exodeoxyribonuclease V, beta subunit
YP_927777.1	KEGG: son:SO2147 exodeoxyribonuclease V, alpha subunit
YP_927778.1	D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli
YP_927779.1	activates fatty acids by binding to coenzyme A
YP_927780.1	KEGG: son:SO1882 AcrB/AcrD/AcrF family protein
YP_927781.1	KEGG: son:SO1881 HlyD family-related protein
YP_927782.1	KEGG: son:SO1880 lipoprotein-34 NlpB
YP_927783.1	catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis
YP_927784.1	KEGG: son:SO1878 glycine cleavage system transcriptional repressor, putative
YP_927785.1	bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine
YP_927786.1	KEGG: sdn:Sden_1649 protein of unknown function UPF0118
YP_927787.1	KEGG: son:SO2868 hypothetical protein
YP_927788.1	KEGG: she:Shewmr4_2347 peptidase M48, Ste24p
YP_927789.1	KEGG: sdn:Sden_1646 arsenate reductase
YP_927790.1	KEGG: son:SO2872 hypothetical protein
YP_927791.1	controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP
YP_927792.1	KEGG: son:SO2878 hypothetical protein
YP_927793.1	KEGG: sdn:Sden_1641 uracil-xanthine permease
YP_927794.1	KEGG: sdn:Sden_1640 glutaredoxin-related protein
YP_927795.1	KEGG: son:SO2881 superoxide dismutase, Fe
YP_927796.1	KEGG: son:SO2882 hypothetical Ser protein kinas
YP_927797.1	KEGG: son:SO2883 hypothetical protein
YP_927798.1	KEGG: son:SO2884 hypothetical protein
YP_927799.1	Multifunctional regulator of fatty acid metabolism
YP_927800.1	involved in regulation of intracellular pH under alkaline conditions
YP_927801.1	disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein
YP_927802.1	KEGG: sdn:Sden_1632 uncharacterized conserved protein UCP006173
YP_927803.1	KEGG: sdn:Sden_1631 membrane-bound lytic murein transglycosylase B
YP_927804.1	KEGG: sdn:Sden_1630 protein of unknown function DUF709
YP_927805.1	blocks the formation of polar Z-ring septums
YP_927806.1	KEGG: son:SO2577 septum site-determining protein MinD
YP_927807.1	KEGG: son:SO2578 cell division topological specificity factor MinE
YP_927808.1	KEGG: son:SO2580 ribonuclease D
YP_927809.1	Activates fatty acids by binding to coenzyme A
YP_927810.1	KEGG: son:SO2582 hydrolase, alpha/beta fold family
YP_927811.1	KEGG: son:SO2583 hypothetical protein
YP_927812.1	KEGG: son:SO2584 hypothetical protein
YP_927814.1	KEGG: son:SO2586 hypothetical protein
YP_927815.1	KEGG: son:SO2081 ATP-dependent helicase, DinG family
YP_927816.1	long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors
YP_927817.1	catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer
YP_927818.1	catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis
YP_927819.1	catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate
YP_927820.1	with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide
YP_927821.1	catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide
YP_927822.1	catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase
YP_927823.1	catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis
YP_927824.1	KEGG: pfl:PFL_3308 diguanylate cyclase, putative
YP_927825.1	Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA
YP_927826.1	This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control
YP_927827.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily
YP_927828.1	catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily
YP_927829.1	KEGG: sdn:Sden_1601 chemotaxis sensory transducer
YP_927830.1	KEGG: son:SO2889 sensory box histidine kinase
YP_927831.1	KEGG: sdn:Sden_2273 protein of unknown function DUF785
YP_927832.1	KEGG: son:SO2890 hypothetical protein
YP_927833.1	KEGG: son:SO2891 hypothetical protein
YP_927834.1	KEGG: son:SO2893 hypothetical protein
YP_927835.1	KEGG: plt:Plut_0244 putative cold-shock DNA-binding domain protein
YP_927836.1	catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate
YP_927837.1	KEGG: sdn:Sden_2279 adenosylmethionine decarboxylase
YP_927838.1	catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis
YP_927839.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_927840.1	KEGG: shm:Shewmr7_1631 hypothetical protein
YP_927841.1	KEGG: son:SO1868 hypothetical protein
YP_927842.1	KEGG: son:SO1867 hypothetical protein
YP_927843.1	KEGG: sdn:Sden_2283 hypothetical protein
YP_927844.1	KEGG: son:SO1865 ABC transporter, ATP-binding protein
YP_927845.1	KEGG: son:SO2787 cold shock domain family protein
YP_927846.1	methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth
YP_927847.1	KEGG: son:SO2789 hypothetical protein
YP_927848.1	Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates
YP_927849.1	Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis
YP_927850.1	KEGG: sdn:Sden_2289 2-hydroxy-3-oxopropionate reductase
YP_927851.1	KEGG: rfr:Rfer_2334 carbohydrate kinase, FGGY
YP_927852.1	KEGG: son:SO2772 cytosolic long-chain acyl-CoA thioester hydrolase family protein
YP_927853.1	KEGG: son:SO2774 3-oxoacyl-(acyl-carrier-protein) synthase II
YP_927854.1	carries the fatty acid chain in fatty acid biosynthesis
YP_927855.1	KEGG: sdn:Sden_2293 3-oxoacyl-(acyl-carrier-protein) reductase
YP_927856.1	KEGG: son:SO2777 malonyl CoA-acyl carrier protein transacylase
YP_927857.1	FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs
YP_927858.1	involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY
YP_927859.1	some L32 proteins have zinc finger motifs consisting of CXXC while others do not
YP_927860.1	KEGG: son:SO2781 hypothetical protein
YP_927861.1	KEGG: cps:CPS_2292 septum formation protein Maf
YP_927862.1	KEGG: sdn:Sden_2300 HAD-superfamily hydrolase subfamily IA, variant 3
YP_927863.1	KEGG: sdn:Sden_2301 pseudouridine synthase, RluD
YP_927864.1	KEGG: son:SO2785 ribonuclease E
YP_927865.1	KEGG: sdn:Sden_2303 sulphate transporter
YP_927866.1	this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae
YP_927867.1	KEGG: son:SO2589 isopenicillin-N synthase
YP_927868.1	essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc)
YP_927869.1	KEGG: son:SO2208 phosphotyrosine protein phosphatase
YP_927870.1	catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA
YP_927871.1	KEGG: son:SO2203 diacylglycerol kinase
YP_927872.1	KEGG: son:SO2202 transcriptional regulator, LysR family
YP_927873.1	KEGG: son:SO2201 hypothetical protein
YP_927874.1	KEGG: son:SO2200 ribosomal protein S6 modification protein, putative
YP_927875.1	KEGG: son:SO2199 hypothetical protein
YP_927876.1	KEGG: son:SO2197 GGDEF family protein
YP_927877.1	KEGG: son:SO2196 LPXTG-site transpeptidase family protein
YP_927878.1	KEGG: son:SO2195 inter-alpha-trypsin inhibitor domain protein
YP_927879.1	KEGG: ppr:PBPRB0759 hypothetical OmpA family protein
YP_927880.1	KEGG: son:SO2193 DNA-binding response regulator
YP_927881.1	KEGG: son:SO2192 sensor histidine kinase
YP_927882.1	KEGG: sma:SAV2545 hypothetical protein
YP_927883.1	catalyzes the formation of L-homocysteine from cystathionine
YP_927884.1	KEGG: son:SO2190 creA protein
YP_927885.1	KEGG: son:SO2189 conserved hypothetical protein
YP_927886.1	KEGG: vvu:VV10464 polyphosphate kinase
YP_927887.1	KEGG: son:SO2185 exopolyphosphatase
YP_927888.1	KEGG: shm:Shewmr7_1836 hypothetical protein
YP_927889.1	KEGG: son:SO2286 sulfate permease family protein
YP_927890.1	KEGG: son:SO2285 hypothetical protein
YP_927891.1	KEGG: son:SO2282 transcriptional regulator, GntR family
YP_927892.1	KEGG: son:SO2280 bicyclomycin resistance protein
YP_927893.1	KEGG: son:SO2279 acetolactate synthase large subunit
YP_927894.1	with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit
YP_927895.1	KEGG: son:SO2277 16 kDa heat shock protein A
YP_927896.1	catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides
YP_927897.1	KEGG: sdn:Sden_2138 carboxylesterase
YP_927898.1	KEGG: sdn:Sden_2139 hypothetical protein
YP_927899.1	KEGG: bce:BC1379 gentamicin resistance protein
YP_927900.1	KEGG: eli:ELI_01445 prolyl oligopeptidase family protein
YP_927901.1	KEGG: eli:ELI_01440 TonB-dependent receptor
YP_927902.1	KEGG: sdn:Sden_2140 peptidylprolyl isomerase, FKBP-type
YP_927903.1	KEGG: noc:Noc_0660 hypothetical protein
YP_927904.1	KEGG: son:SO1994 membrane-bound lytic transglycolase-related protein
YP_927905.1	KEGG: sdn:Sden_2142 hypothetical protein
YP_927906.1	KEGG: son:SO1990 hypothetical protein
YP_927907.1	KEGG: son:SO1989 chemotaxis protein CheV
YP_927908.1	KEGG: son:SO1691 lipoprotein Blc
YP_927909.1	KEGG: son:SO1988 hypothetical methyltransferase
YP_927910.1	KEGG: son:SO1987 ATP-dependent protease La (LON) domain protein
YP_927911.1	KEGG: son:SO1986 RNA polymerase sigma-70 factor, ECF subfamily
YP_927912.1	KEGG: son:SO1985 transcriptional activator, putative
YP_927913.1	KEGG: son:SO2607 spore maturation protein A-related protein
YP_927914.1	in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA
YP_927915.1	KEGG: son:SO2610 hydrolase, TatD family
YP_927916.1	KEGG: son:SO2611 type IV pilus biogenesis protein pilZ
YP_927917.1	KEGG: son:SO2612 DNA polymerase III, delta prime subunit
YP_927918.1	catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP)
YP_927919.1	KEGG: son:SO2614 conserved hypothetical protein TIGR00247
YP_927920.1	KEGG: sdn:Sden_2053 aminotransferase, class IV
YP_927921.1	Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis
YP_927922.1	functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor
YP_927923.1	KEGG: son:SO2618 ATP-binding protein, Mrp/Nbp35 family
YP_927924.1	methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content
YP_927925.1	KEGG: son:SO2621 conserved hypothetical protein TIGR00486
YP_927926.1	KEGG: sdn:Sden_2074 hypothetical protein
YP_927927.1	KEGG: son:SO2622 hypothetical protein
YP_927928.1	leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys
YP_927929.1	Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate
YP_927930.1	KEGG: son:SO2625 translation initiation factor IF-1
YP_927931.1	KEGG: son:SO2626 ATP-dependent Clp protease, ATP-binding subunit ClpA
YP_927932.1	involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA
YP_927933.1	KEGG: son:SO2628 stress response protein CspD
YP_927934.1	KEGG: son:SO2629 isocitrate dehydrogenase, NADP-dependent
YP_927935.1	KEGG: sdn:Sden_1830 pseudouridine synthase, Rsu
YP_927936.1	KEGG: son:SO2631 MutT/nudix family protein
YP_927937.1	catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs
YP_927938.1	HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis
YP_927939.1	Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide
YP_927940.1	KEGG: sdn:Sden_1825 cupin 4
YP_927941.1	KEGG: sdn:Sden_1824 hypothetical protein
YP_927942.1	KEGG: son:SO2638 leucine dehydrogenase
YP_927943.1	KEGG: son:SO2639 hypothetical protein
YP_927944.1	KEGG: son:SO2640 transcriptional regulator, MarR family
YP_927945.1	KEGG: sdn:Sden_2007 hypothetical protein
YP_927946.1	KEGG: son:SO2643 oxidoreductase, FAD-binding, putative
YP_927947.1	catalyzes the formation of phosphoenolpyruvate from pyruvate
YP_927948.1	KEGG: son:SO2645 hypothetical protein
YP_927949.1	tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate
YP_927950.1	KEGG: sdn:Sden_2107 thioesterase superfamily
YP_927951.1	KEGG: son:SO2648 DNA-binding response regulator, LuxR family
YP_927952.1	KEGG: son:SO2052 hypothetical oxidoreductase
YP_927953.1	KEGG: son:SO2742 sensor histidine kinase/response regulator
YP_927954.1	Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA
YP_927955.1	KEGG: son:SO2744 helicase
YP_927956.1	functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase
YP_927957.1	KEGG: sdn:Sden_2545 ATP-binding region, ATPase-like protein
YP_927958.1	KEGG: pha:PSHAa0696 hypothetical protein
YP_927959.1	KEGG: son:SO2746 hypothetical protein
YP_927960.1	KEGG: son:SO2747 peptidoglycan-associated lipoprotein
YP_927961.1	forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA
YP_927962.1	KEGG: sdn:Sden_1393 TolA
YP_927963.1	KEGG: son:SO2750 tolR protein
YP_927964.1	KEGG: sdn:Sden_1391 MotA/TolQ/ExbB proton channel
YP_927965.1	KEGG: son:SO2752 conserved hypothetical protein TIGR00051
YP_927966.1	KEGG: son:SO2753 prolyl endopeptidase
YP_927967.1	KEGG: sdn:Sden_1398 OmpA/MotB
YP_927968.1	Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A)
YP_927969.1	KEGG: sdn:Sden_2091 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_927970.1	KEGG: son:SO2757 membrane protein, putative
YP_927971.1	Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate
YP_927972.1	catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis
YP_927973.1	glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate
YP_927974.1	KEGG: son:SO2762 nagD protein
YP_927975.1	KEGG: son:SO2766 hypothetical protein
YP_927976.1	functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP
YP_927977.1	KEGG: sfr:Sfri_1599 protein of unknown function DUF1289
YP_927978.1	KEGG: cvi:CV0893 probable 5-carboxymethyl-2-hydroxymuconate D-isomerase
YP_927979.1	KEGG: sdn:Sden_2036 glyoxalase/bleomycin resistance protein/dioxygenase
YP_927980.1	KEGG: son:SO2794 hypothetical protein
YP_927981.1	KEGG: sdn:Sden_2038 hypothetical protein
YP_927982.1	KEGG: mca:MCA2508 oxygenase, putative
YP_927983.1	KEGG: son:SO2798 hypothetical protein
YP_927984.1	KEGG: son:SO2799 lipoprotein, putative
YP_927985.1	KEGG: sdn:Sden_2373 hypothetical protein
YP_927986.1	KEGG: son:SO1918 MATE efflux family protein
YP_927987.1	KEGG: sdn:Sden_2375 ion transport protein
YP_927988.1	KEGG: sdn:Sden_2376 ErfK/YbiS/YcfS/YnhG
YP_927989.1	KEGG: sdn:Sden_2377 protein of unknown function DUF991
YP_927990.1	KEGG: son:SO2769 hypothetical protein
YP_927991.1	KEGG: son:SO2930 hypothetical protein
YP_927992.1	KEGG: son:SO2931 hypothetical protein
YP_927993.1	KEGG: son:SO2932 transcriptional regulator, AraC family
YP_927994.1	SohB; periplasmic protein; member of the peptidase S49 family
YP_927995.1	KEGG: son:SO2934 hypothetical protein
YP_927996.1	KEGG: son:SO2935 short chain dehydrogenase
YP_927997.1	KEGG: vpa:VPA0405 hypothetical protein
YP_927998.1	KEGG: son:SO2936 hypothetical protein
YP_927999.1	KEGG: sdn:Sden_2436 pseudouridine synthase, Rsu
YP_928000.1	KEGG: son:SO3014 putative segregation and condensation protein B
YP_928001.1	KEGG: son:SO3015 putative segregation and condensation protein A
YP_928002.1	KEGG: son:SO3016 Sua5/YciO/YrdC/YwlC family protein
YP_928003.1	KEGG: sdn:Sden_2449 PHP-like protein
YP_928004.1	with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine
YP_928005.1	TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity
YP_928006.1	Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate
YP_928007.1	monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate
YP_928008.1	catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate
YP_928009.1	catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis
YP_928010.1	KEGG: rme:Rmet_5659 isochorismatase hydrolase
YP_928011.1	KEGG: vch:VC0600 hypothetical protein
YP_928012.1	Involved in cell division; probably involved in intracellular septation
YP_928013.1	unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity
YP_928014.1	KEGG: sdn:Sden_1465 exodeoxyribonuclease III
YP_928015.1	KEGG: sdn:Sden_0861 chemotaxis sensory transducer
YP_928016.1	KEGG: son:SO3047 hypothetical protein
YP_928017.1	KEGG: son:SO3054 metallo-beta-lactamase family protein
YP_928018.1	KEGG: sfr:Sfri_1410 alpha/beta hydrolase fold
YP_928020.1	decatenates replicating daughter chromosomes
YP_928021.1	Catalyzes first step of the de novo purine nucleotide biosynthetic pathway
YP_928022.1	KEGG: son:SO3065 colicin V production protein
YP_928023.1	KEGG: sdn:Sden_1488 sporulation related
YP_928024.1	KEGG: son:SO3067 FolC bifunctional protein
YP_928025.1	mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability
YP_928026.1	KEGG: son:SO3069 putative membrane protein
YP_928027.1	KEGG: son:SO3070 aspartate semialdehyde dehydrogenese
YP_928028.1	KEGG: son:SO3071 erythronate-4-phosphate dehydrogenase
YP_928029.1	KEGG: son:SO3072 3-oxoacyl-(acyl-carrier-protein) synthase I
YP_928030.1	KEGG: son:SO3073 hypothetical protein
YP_928031.1	KEGG: sdn:Sden_1540 hypothetical protein
YP_928032.1	KEGG: son:SO3077 hypothetical protein
YP_928033.1	KEGG: sdn:Sden_1538 major facilitator superfamily MFS_1
YP_928034.1	catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis
YP_928035.1	involved in methylation of ribosomal protein L3
YP_928036.1	KEGG: son:SO3081 Smr domain protein
YP_928037.1	KEGG: son:SO3082 phosphohistidine phosphatase SixA
YP_928038.1	KEGG: son:SO3083 peptidase, M16 family
YP_928039.1	KEGG: son:SO3084 sensory box protein
YP_928040.1	KEGG: sfr:Sfri_2673 hypothetical protein
YP_928041.1	KEGG: sdn:Sden_1531 hypothetical protein
YP_928042.1	multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate
YP_928043.1	FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth
YP_928044.1	KEGG: son:SO3090 MoxR domain protein
YP_928045.1	KEGG: son:SO3091 hypothetical protein
YP_928046.1	KEGG: son:SO3092 hypothetical protein
YP_928047.1	KEGG: son:SO3093 von Willebrand factor type A domain protein
YP_928048.1	KEGG: son:SO3094 TPR domain protein
YP_928049.1	KEGG: son:SO3095 hypothetical protein
YP_928050.1	Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription
YP_928051.1	KEGG: son:SO3097 hypothetical protein
YP_928052.1	KEGG: sdn:Sden_1520 sodium/proline symporter
YP_928053.1	KEGG: sdn:Sden_1414 membrane protein involved in aromatic hydrocarbon degradation
YP_928054.1	KEGG: son:SO3100 hypothetical protein
YP_928055.1	KEGG: son:SO3101 hypothetical protein
YP_928056.1	KEGG: son:SO3102 AcrA/AcrE family protein
YP_928057.1	KEGG: son:SO3103 AcrB/AcrD/AcrF family protein
YP_928058.1	KEGG: son:SO3104 hypothetical protein
YP_928059.1	KEGG: son:SO3105 phage shock protein E
YP_928060.1	KEGG: son:SO3106 cold-active serine alkaline protease
YP_928061.1	KEGG: son:SO3107 hypothetical protein
YP_928062.1	KEGG: son:SO3108 precorrin-2 oxidase / ferrochelatase
YP_928063.1	KEGG: sdn:Sden_1406 rhodanese-like protein
YP_928064.1	KEGG: son:SO3109 hypothetical protein
YP_928065.1	forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF
YP_928066.1	part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane
YP_928067.1	member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex
YP_928068.1	Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr)
YP_928069.1	Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step
YP_928070.1	KEGG: sdn:Sden_1399 protein of unknown function DUF479
YP_928071.1	KEGG: son:SO3117 thioredoxin, putative
YP_928072.1	KEGG: sdn:Sden_2524 pseudouridylate synthase
YP_928073.1	KEGG: son:SO3119 hypothetical protein
YP_928074.1	KEGG: son:SO3121 hypothetical protein
YP_928075.1	involved in the import of serine and threonine coupled with the import of sodium
YP_928076.1	KEGG: son:SO3123 chemotaxis protein CheV
YP_928077.1	KEGG: vvu:VV13126 phopholipase D-family protein
YP_928078.1	KEGG: son:SO3124 tyrosine-specific protein phosphatase, putative
YP_928079.1	KEGG: son:SO3126 methylated-DNA--protein-cysteine methyltransferase
YP_928080.1	KEGG: son:SO3127 Ada regulatory protein, putative
YP_928081.1	KEGG: son:SO3128 ABC transporter, ATP-binding/permease protein, putative
YP_928082.1	Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation
YP_928083.1	KEGG: son:SO3132 hypothetical protein
YP_928084.1	KEGG: son:SO3134 C4-dicarboxylate-binding periplasmic protein
YP_928085.1	KEGG: son:SO3135 C4-dicarboxylate transporter, putative
YP_928086.1	KEGG: son:SO3136 C4-dicarboxylate transport protein
YP_928087.1	KEGG: son:SO3136.1 hypothetical two-component sensor histidine kinase protein
YP_928088.1	KEGG: son:SO3138 C4-dicarboxylate transport transcriptional regulatory protein
YP_928089.1	KEGG: son:SO1917 multidrug resistance protein, putative
YP_928090.1	KEGG: son:SO1916 transcriptional regulator, LysR family
YP_928091.1	KEGG: sdn:Sden_3044 hypothetical protein
YP_928092.1	KEGG: sdn:Sden_3045 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_928093.1	KEGG: she:Shewmr4_2603 maleylacetoacetate isomerase
YP_928094.1	KEGG: son:SO1670 fumarylacetoacetate hydrolase family protein
YP_928095.1	KEGG: son:SO1669 transcriptional regulatory protein TyrR
YP_928096.1	4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction
YP_928097.1	phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin
YP_928098.1	KEGG: son:SO1665 UTP--glucose-1-phosphate uridylyltransferase
YP_928099.1	KEGG: son:SO1664 UDP-glucose 4-epimerase
YP_928100.1	KEGG: sdn:Sden_2598 ferredoxin-type protein NapF
YP_928101.1	KEGG: sdn:Sden_0706 protein of unknown function DUF583
YP_928102.1	KEGG: son:SO1661 transcriptional regulator, LysR family
YP_928103.1	KEGG: son:SO1659 decaheme cytochrome c
YP_928104.1	KEGG: son:SO1658 hypothetical protein
YP_928105.1	KEGG: son:SO1657 hypothetical protein
YP_928106.1	catalyzes phosphorylation of fructose; cytosolic enzyme
YP_928107.1	KEGG: son:SO1655 cysQ protein
YP_928108.1	KEGG: son:SO1652 putative histidinol phosphatase
YP_928109.1	KEGG: son:SO3163 lipoprotein
YP_928110.1	KEGG: son:SO4686 NAD dependent epimerase/dehydratase family protein
YP_928111.1	KEGG: sgl:SG1368 putative UDP-glucose dehydrogenase
YP_928112.1	KEGG: vvy:VV0303 dTDP-6-deoxy-D-xylo-4-hexulose-3,5-epimerase
YP_928113.1	KEGG: cps:CPS_4309 hypothetical protein
YP_928114.1	KEGG: pcr:Pcryo_0627 dTDP-4-dehydrorhamnose reductase
YP_928115.1	KEGG: pcr:Pcryo_0625 glucose-1-phosphate thymidylyltransferase
YP_928116.1	KEGG: bth:BT0352 hypothetical protein
YP_928117.1	KEGG: son:SO3188 dTDP-glucose 4,6-dehydratase
YP_928118.1	KEGG: pat:Patl_1573 phosphoglucosamine mutase
YP_928119.1	KEGG: son:SO3171 polysaccharide biosynthesis protein
YP_928120.1	KEGG: dps:DP0029 pilin glycosylation protein
YP_928121.1	KEGG: pca:Pcar_1117 hypothetical protein
YP_928122.1	KEGG: ssp:SSP0070 capsular polysaccharide synthesis protein
YP_928123.1	KEGG: pca:Pcar_1118 conserved hypothetical protein, possibly membrane-associated
YP_928124.1	KEGG: lpp:lpp0827 hypothetical protein
YP_928125.1	KEGG: cps:CPS_2625 acetoacetyl-CoA reductase
YP_928126.1	KEGG: fnu:FN1909 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_928127.1	KEGG: mac:MA2464 hypothetical protein
YP_928128.1	KEGG: nar:Saro_3221 glycosyl transferase, group 1
YP_928129.1	KEGG: mmp:MMP0354 putative oligosaccharide transporter
YP_928130.1	KEGG: bfs:BF1907 putative LPS biosynthesis related polymerase
YP_928131.1	KEGG: mhu:Mhun_0391 glycosyl transferase, group 1
YP_928132.1	KEGG: plt:Plut_1482 DegT/DnrJ/EryC1/StrS family protein
YP_928133.1	KEGG: bbr:BB0154 probable acetyltransferase
YP_928134.1	KEGG: msu:MS1500 MviM protein
YP_928135.1	KEGG: pcr:Pcryo_0613 UDP-glucose/GDP-mannose dehydrogenase
YP_928136.1	KEGG: vvy:VV0341 UDP-N-acetylglucosamine 2-epimerase
YP_928137.1	KEGG: son:SO3191 chain length determinant protein
YP_928138.1	crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown
YP_928139.1	KEGG: sde:Sde_1576 ClpX, ATPase regulatory subunit
YP_928140.1	KEGG: son:SO3194 transcriptional activator rfaH, putative
YP_928141.1	KEGG: sdn:Sden_1357 amino acid/peptide transporter
YP_928142.1	KEGG: son:SO3196 response regulator
YP_928143.1	KEGG: son:SO3197 vacJ lipoprotein, putative
YP_928144.1	KEGG: son:SO3198 hypothetical protein
YP_928145.1	KEGG: sdn:Sden_1353 FlhB domain protein
YP_928146.1	KEGG: son:SO3200 hypothetical protein
YP_928147.1	KEGG: son:SO3202 purine-binding chemotaxis protein CheW
YP_928148.1	KEGG: son:SO3203 CheW domain protein
YP_928149.1	KEGG: son:SO3204 ParA family protein
YP_928150.1	KEGG: sdn:Sden_1348 hypothetical protein
YP_928151.1	regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins
YP_928152.1	KEGG: son:SO3207 chemotaxis protein
YP_928153.1	KEGG: son:SO3208 chemotaxis protein CheZ
YP_928154.1	KEGG: son:SO3209 chemotaxis protein CheY
YP_928155.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes
YP_928156.1	KEGG: shm:Shewmr7_1365 cobyrinic acid a,c-diamide synthase
YP_928157.1	positive regulator of class III flagellar genes
YP_928158.1	membrane protein involved in the flagellar export apparatus
YP_928159.1	membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export
YP_928160.1	FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus
YP_928161.1	KEGG: son:SO3217 flagellar biosynthetic protein FliQ
YP_928162.1	FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus
YP_928163.1	KEGG: son:SO3219 flagellar protein FliO
YP_928164.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_928165.1	with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation
YP_928166.1	interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring
YP_928167.1	KEGG: son:SO3223 flagellar hook-length control protein FliK
YP_928168.1	KEGG: son:SO3224 flagellar protein FliJ
YP_928169.1	involved in type III protein export during flagellum assembly
YP_928170.1	binds to and inhibits the function of flagella specific ATPase FliI
YP_928171.1	One of three proteins involved in switching the direction of the flagellar rotation
YP_928172.1	the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_928173.1	KEGG: sdn:Sden_1323 flagellar hook-basal body complex protein (FliE)
YP_928174.1	KEGG: son:SO3230 flagellar regulatory protein C
YP_928175.1	KEGG: son:SO3231 flagellar regulatory protein B
YP_928176.1	KEGG: son:SO3232 flagellar regulatory protein A
YP_928177.1	flagellin specific chaperone
YP_928178.1	KEGG: son:SO3234 hypothetical protein
YP_928179.1	KEGG: sdn:Sden_1317 flagellar hook-associated 2-like protein
YP_928180.1	KEGG: son:SO3236 flagellin FlaG
YP_928181.1	KEGG: sdn:Sden_1314 flagellin-like protein
YP_928182.1	KEGG: sdn:Sden_1314 flagellin-like protein
YP_928183.1	with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.
YP_928184.1	KEGG: sdn:Sden_1312 flagellar hook-associated protein
YP_928185.1	Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space
YP_928186.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum
YP_928187.1	part of the basal body which consists of four rings L, P, S, and M mounted on a central rod
YP_928188.1	makes up the distal portion of the flagellar basal body rod
YP_928189.1	FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod
YP_928190.1	the hook connects flagellar basal body to the flagellar filament
YP_928191.1	acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production
YP_928192.1	with FlgF and B makes up the proximal portion of the flagellar basal body rod
YP_928193.1	with FlgF and C makes up the proximal portion of the flagellar basal body rod
YP_928194.1	KEGG: son:SO3251 chemotaxis protein methyltransferase CheR
YP_928195.1	KEGG: son:SO3252 chemotaxis protein CheV
YP_928196.1	required for the assembly of the flagellar basal body P-ring
YP_928197.1	KEGG: son:SO3254 negative regulator of flagellin synthesis FlgM
YP_928198.1	KEGG: son:SO3255 flagellar biosynthetic protein FlgN
YP_928199.1	KEGG: son:SO3256 hypothetical protein
YP_928200.1	KEGG: son:SO3257 hypothetical protein
YP_928201.1	KEGG: son:SO3258 hypothetical protein
YP_928202.1	KEGG: ilo:IL1296 methyl-accepting chemotaxis protein
YP_928203.1	KEGG: vfi:VF0140 UDP-N-acetylglucosamine 4,6-dehydratase
YP_928204.1	KEGG: vvu:VV10810 predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
YP_928205.1	KEGG: vvu:VV10809 hypothetical protein
YP_928206.1	KEGG: vvu:VV10808 sialic acid synthase
YP_928207.1	KEGG: vvu:VV10807 UDP-N-acetylglucosamine 2-epimerase
YP_928208.1	KEGG: vvu:VV10806 hypothetical protein
YP_928209.1	KEGG: vvu:VV10805 acetyltransferase
YP_928210.1	KEGG: vpa:VP0202 putative sugar-phosphate nucleotide transferase
YP_928211.1	KEGG: vvu:VV10803 N-acylneuraminate cytidylyltransferase
YP_928212.1	KEGG: son:SO3273 hypothetical protein
YP_928213.1	KEGG: son:SO3274 hypothetical protein
YP_928214.1	KEGG: sdn:Sden_1281 hypothetical protein
YP_928215.1	KEGG: son:SO3276 hypothetical protein
YP_928216.1	KEGG: sdn:Sden_1279 regulatory protein, TetR
YP_928217.1	KEGG: sdn:Sden_1278 secretion protein HlyD
YP_928218.1	KEGG: sdn:Sden_1277 acriflavin resistance protein
YP_928219.1	KEGG: son:SO3280 hypothetical protein
YP_928220.1	KEGG: son:SO3282 methyl-accepting chemotaxis protein
YP_928221.1	KEGG: xcv:XCV3738 putative regulatory protein, TfoX family
YP_928222.1	KEGG: sdn:Sden_1276 Cyd operon protein YbgT
YP_928223.1	KEGG: son:SO3285 cytochrome bd-I oxidase subunit II
YP_928224.1	KEGG: son:SO3286 cytochrome bd-I oxidase subunit I
YP_928225.1	catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis
YP_928226.1	YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function
YP_928227.1	KEGG: son:SO3291 cytidine/deoxycytidylate deaminase family protein
YP_928228.1	KEGG: dps:DP0462 hypothetical protein
YP_928229.1	KEGG: cvi:CV0615 hypothetical protein
YP_928230.1	KEGG: ecp:ECP_2709 hypothetical protein
YP_928232.1	contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway
YP_928233.1	catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate
YP_928234.1	bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides
YP_928235.1	EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains
YP_928236.1	with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis
YP_928237.1	KEGG: son:SO3310 hypothetical protein
YP_928238.1	catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG
YP_928239.1	catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis
YP_928240.1	KEGG: son:SO3313 hypothetical protein
YP_928241.1	KEGG: son:SO3314 fimbrial biogenesis and twitching motility protein, putative
YP_928242.1	23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance
YP_928243.1	KEGG: son:SO3316 hypothetical protein
YP_928244.1	KEGG: son:SO3317 5'-nucleotidase, putative
YP_928245.1	KEGG: son:SO3323 acetyltransferase, GNAT family
YP_928246.1	KEGG: son:SO3326 hypothetical protein
YP_928247.1	KEGG: son:SO3331 hypothetical protein
YP_928248.1	KEGG: son:SO3332 transcriptional regulator, CopG family
YP_928249.1	KEGG: son:SO3333 transporter, putative
YP_928250.1	KEGG: son:SO3334 GGDEF family protein
YP_928251.1	KEGG: son:SO3335 hypothetical protein
YP_928252.1	KEGG: son:SO3336 hypothetical protein
YP_928253.1	KEGG: sdn:Sden_1247 hypothetical protein
YP_928254.1	KEGG: son:SO1484 isocitrate lyase
YP_928255.1	Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle
YP_928256.1	KEGG: son:SO1480 GGDEF family protein
YP_928257.1	KEGG: son:SO1479 hypothetical protein
YP_928258.1	KEGG: son:SO1478 methylase, putative
YP_928259.1	KEGG: son:SO1476 small protein A
YP_928260.1	KEGG: sdn:Sden_1241 protein of unknown function UPF0125
YP_928261.1	KEGG: son:SO1474 hypothetical protein
YP_928262.1	binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation
YP_928263.1	KEGG: son:SO2455 transcriptional regulator, LysR family
YP_928264.1	KEGG: rso:RSc1153 putative transmembrane efflux transmembrane protein
YP_928265.1	KEGG: bha:BH1129 isoaspartyl dipeptidase
YP_928266.1	KEGG: vpa:VPA1014 putative S-transferase
YP_928267.1	KEGG: ccr:CC0579 TonB-dependent receptor
YP_928268.1	KEGG: ilo:IL2428 secreted protein related to cyanophycinase CphE
YP_928270.1	KEGG: pae:PA0307 hypothetical protein
YP_928271.1	KEGG: psp:PSPPH_5044 methyl-accepting chemotaxis protein
YP_928272.1	KEGG: sdn:Sden_0849 hypothetical protein
YP_928273.1	KEGG: son:SO1416 DNA-binding response regulator
YP_928274.1	KEGG: son:SO1417 sensor histidine kinase
YP_928275.1	KEGG: wsu:WS0124 flavocytochrome c flavin subunit
YP_928276.1	KEGG: son:SO1413 tetraheme cytochrome c, putative
YP_928277.1	KEGG: son:SO1420 outer membrane porin, putative
YP_928278.1	KEGG: son:SO3388 ATP-dependent RNA helicase, DEAD box family
YP_928279.1	KEGG: son:SO3389 sensory box protein
YP_928280.1	KEGG: son:SO3391 ATP-dependent protease, putative
YP_928281.1	KEGG: vch:VCA0998 NADH-dependent flavin oxidoreductase, Oye family
YP_928282.1	KEGG: son:SO3393 transcriptional regulator, TetR family
YP_928283.1	KEGG: son:SO3395 hypothetical protein
YP_928284.1	KEGG: son:SO3401 hypothetical protein
YP_928285.1	KEGG: son:SO0002 proton/peptide symporter family protein
YP_928286.1	KEGG: vch:VCA0275 IS1004 transposase
YP_928287.1	KEGG: cps:CPS_2871 cold-active alkaline serine protease
YP_928288.1	KEGG: she:Shewmr4_1145 OsmC family protein
YP_928289.1	KEGG: son:SO3411 protease, putative
YP_928290.1	KEGG: sdn:Sden_2554 peptidase M61
YP_928291.1	KEGG: son:SO1552 TPR domain protein
YP_928292.1	KEGG: son:SO1551 GGDEF domain protein protein
YP_928293.1	KEGG: son:SO1550 hypothetical protein
YP_928294.1	has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups
YP_928295.1	KEGG: son:SO1548 hypothetical protein
YP_928296.1	KEGG: sdn:Sden_2560 peptidase S9, prolyl oligopeptidase active site region
YP_928297.1	catalyzes the formation of 2-oxoglutarate from isocitrate
YP_928298.1	KEGG: son:SO1492 peptidyl-prolyl cis-trans isomerase, cyclophilin family
YP_928300.1	KEGG: son:SO1536 hypothetical protein
YP_928301.1	KEGG: son:SO1535 hypothetical protein
YP_928302.1	KEGG: shm:Shewmr7_2794 hypothetical protein
YP_928303.1	Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence
YP_928305.1	Required for the synthesis of the thiazole moiety
YP_928306.1	with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella
YP_928307.1	Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.
YP_928308.1	KEGG: sdn:Sden_2569 exodeoxyribonuclease VII, small subunit
YP_928309.1	KEGG: son:SO1526 geranyltranstransferase
YP_928310.1	catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate
YP_928311.1	with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor
YP_928312.1	catalyzes the phosphorylation of NAD to NADP
YP_928313.1	KEGG: son:SO1522 L-lactate permease, putative
YP_928314.1	KEGG: son:SO1521 iron-sulfur cluster-binding protein
YP_928315.1	KEGG: son:SO1520 hypothetical protein
YP_928316.1	KEGG: son:SO1519 iron-sulfur cluster-binding protein
YP_928317.1	KEGG: son:SO1518 hypothetical protein
YP_928318.1	KEGG: son:SO4043 TonB domain protein
YP_928319.1	KEGG: shm:Shewmr7_2825 multi antimicrobial extrusion protein MatE
YP_928320.1	KEGG: son:SO1502 cobalamin synthesis protein/P47K family protein
YP_928321.1	KEGG: son:SO1501 ATP-dependent RNA helicase, DEAD box family
YP_928322.1	KEGG: son:SO1500 sensory box protein
YP_928323.1	KEGG: son:SO1499 glycogen synthase
YP_928324.1	catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate
YP_928325.1	KEGG: son:SO1496 glycogen phosphorylase family protein
YP_928326.1	KEGG: son:SO1495 glycogen operon protein
YP_928327.1	KEGG: son:SO1494 1,4-alpha-glucan branching enzyme
YP_928328.1	KEGG: son:SO1493 4-alpha-glucanotransferase
YP_928329.1	KEGG: son:SO1490 alcohol dehydrogenase II
YP_928330.1	KEGG: son:SO1489 hypothetical protein
YP_928331.1	KEGG: sdn:Sden_3405 Na+/H+ antiporter NhaC
YP_928332.1	KEGG: sdn:Sden_3398 FAD dependent oxidoreductase
YP_928333.1	KEGG: sdn:Sden_3397 acetyltransferase, GNAT family
YP_928334.1	KEGG: son:SO1487 hypothetical protein
YP_928335.1	KEGG: son:SO1486 cytosolic long-chain acyl-CoA thioester hydrolase family protein
YP_928336.1	KEGG: son:SO3338 L-allo-threonine aldolase
YP_928337.1	KEGG: son:SO3342 hypothetical protein
YP_928338.1	KEGG: son:SO3341 antioxidant, AhpC/TSA family
YP_928339.1	KEGG: son:SO3340 hypothetical small-conductance mechanosensitive channel
YP_928340.1	KEGG: son:SO3339 OmpA family protein
YP_928341.1	KEGG: bur:Bcep18194_A5604 protein of unknown function DUF924
YP_928342.1	KEGG: son:SO3343 hypothetical protein
YP_928343.1	KEGG: she:Shewmr4_1201 hypothetical protein
YP_928344.1	involved in start site selection during the initiation of translation
YP_928345.1	KEGG: son:SO3346 putative transcriptional regulator
YP_928346.1	similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function
YP_928347.1	KEGG: son:SO3349 glutathione peroxidase, putative
YP_928348.1	KEGG: son:SO3350 twitching motility protein PilU
YP_928349.1	KEGG: shm:Shewmr7_1265 twitching motility protein
YP_928350.1	KEGG: son:SO3352 conserved hypothetical protein TIGR00044
YP_928351.1	KEGG: son:SO3354 pyrroline-5-carboxylate reductase
YP_928352.1	KEGG: sdn:Sden_2684 protein of unknown function YGGT
YP_928353.1	KEGG: son:SO3356 hypothetical protein
YP_928354.1	KEGG: son:SO3357 hypothetical protein
YP_928355.1	HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine
YP_928356.1	KEGG: son:SO3359 oxygen-independent coproporphyrinogen III oxidase, putative
YP_928357.1	KEGG: son:SO3361 hypothetical protein
YP_928358.1	KEGG: son:SO3363 transcriptional regulator, LysR family
YP_928359.1	KEGG: son:SO3364 hypothetical protein
YP_928360.1	catalyzes the formation of glutamate from glutamine
YP_928361.1	KEGG: son:SO3366 hypothetical protein
YP_928362.1	tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine
YP_928363.1	KEGG: shm:Shewmr7_1251 A/G-specific adenine glycosylase
YP_928364.1	KEGG: hit:NTHI0920 hypothetical protein
YP_928366.1	KEGG: rru:Rru_A1243 cytochrome b561
YP_928367.1	KEGG: cps:CPS_1945 hypothetical protein
YP_928368.1	KEGG: vpa:VPA0205 C factor cell-cell signaling protein
YP_928369.1	KEGG: vpa:VPA0204 hypothetical protein
YP_928370.1	KEGG: son:SO1194 protein-export membrane protein SecF
YP_928371.1	KEGG: son:SO1193 protein-export membrane protein SecD
YP_928374.1	KEGG: son:SO2323 methyl-accepting chemotaxis protein
YP_928375.1	four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity
YP_928376.1	catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers
YP_928377.1	catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis
YP_928378.1	KEGG: son:SO1139 peptidyl-prolyl cis-trans isomerase FklB
YP_928379.1	KEGG: son:SO1137 hypothetical protein
YP_928380.1	KEGG: hch:HCH_00844 transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
YP_928381.1	KEGG: sdn:Sden_0739 glutathione S-transferase-like protein
YP_928382.1	chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion
YP_928383.1	heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria
YP_928384.1	KEGG: son:SO1125 integral membrane domain protein
YP_928385.1	KEGG: ilo:IL0884 secreted protein containing internal repeats
YP_928386.1	KEGG: son:SO1123 hypothetical protein
YP_928387.1	Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway
YP_928388.1	catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis
YP_928389.1	KEGG: son:SO1120 xanthine/uracil permease family protein
YP_928390.1	KEGG: son:SO1117 cytosol aminopeptidase, putative
YP_928391.1	KEGG: son:SO1115 aminoacyl-histidine dipeptidase
YP_928392.1	KEGG: pae:PA5189 probable transcriptional regulator
YP_928393.1	catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis
YP_928394.1	catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia
YP_928396.1	KEGG: gme:Gmet_0767 protein of unknown function DUF853, NPT hydrolase putative
YP_928397.1	KEGG: son:SO3741.1 hypothetical protein
YP_928398.1	KEGG: eca:ECA3516 putative tRNA/rRNA methyltransferase
YP_928399.1	involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function
YP_928400.1	KEGG: son:SO1112.1 hypothetical chemotactic transducer
YP_928401.1	KEGG: son:SO1112 bacterioferritin subunit 1
YP_928402.1	KEGG: son:SO1111 bacterioferritin subunit 2
YP_928403.1	KEGG: xcb:XC_0641 GGDEF family protein
YP_928404.1	KEGG: son:SO1110 hypothetical protein
YP_928405.1	KEGG: son:SO1109 thiamin biosynthesis lipoprotein ApbE
YP_928406.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928407.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
YP_928408.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
YP_928409.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928410.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928411.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928412.1	KEGG: son:SO1102 TonB-dependent receptor C-terminal region domain lipoprotein
YP_928413.1	catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2
YP_928414.1	KEGG: hch:HCH_00744 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component
YP_928415.1	KEGG: ppr:PBPRA1404 hypothetical permease component of C4 dicarboxylatetransporter
YP_928416.1	KEGG: abo:ABO_2686 TRAP-type transport system, small permease component
YP_928417.1	KEGG: ppr:PBPRA0820 putative cell division protein BolA
YP_928418.1	KEGG: ppr:PBPRB1268 hypothetical protein
YP_928419.1	KEGG: sdn:Sden_0979 2OG-Fe(II) oxygenase
YP_928420.1	KEGG: son:SO1097 putative ribosomal RNA small subunit methyltransferase D
YP_928421.1	cofactor involved in the reduction of disulfides
YP_928422.1	KEGG: son:SO3807 sterol desaturase family protein
YP_928423.1	KEGG: son:SO3808 hypothetical protein
YP_928424.1	KEGG: son:SO3810 OmpA-like transmembrane domain protein
YP_928425.1	KEGG: son:SO3811 lipoprotein, putative
YP_928426.1	KEGG: son:SO3812 peptidyl-prolyl cis-trans isomerase A
YP_928427.1	KEGG: son:SO3813 hypothetical protein
YP_928428.1	KEGG: son:SO3814 AmpG protein, putative
YP_928429.1	putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription
YP_928430.1	KEGG: sdn:Sden_0769 hypothetical protein
YP_928431.1	KEGG: son:SO3817 2-dehydropantoate 2-reductase
YP_928432.1	KEGG: son:SO3822 hypothetical protein
YP_928433.1	catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis
YP_928434.1	KEGG: sdn:Sden_0924 protein of unknown function DUF819
YP_928435.1	KEGG: son:SO3829 hypothetical protein
YP_928436.1	KEGG: son:SO3830 hypothetical protein
YP_928437.1	KEGG: son:SO3832 hemK family protein
YP_928438.1	recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2
YP_928439.1	catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins
YP_928440.1	KEGG: son:SO3835 outer membrane lipoprotein LolB
YP_928441.1	An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis
YP_928442.1	catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP
YP_928443.1	translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1
YP_928444.1	Enables the recycling of peptidyl-tRNAs produced at termination of translation
YP_928445.1	KEGG: son:SO1183 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
YP_928446.1	KEGG: son:SO1182 hypothetical protein
YP_928447.1	catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A)
YP_928448.1	KEGG: son:SO1180 PhoH family protein
YP_928449.1	KEGG: sdn:Sden_0813 protein of unknown function UPF0054
YP_928450.1	KEGG: son:SO1178 magnesium and cobalt efflux protein CorC
YP_928451.1	Transfers the fatty acyl group on membrane lipoproteins
YP_928452.1	KEGG: pha:PSHAa0134 hypothetical protein
YP_928453.1	KEGG: sdn:Sden_0798 protein of unknown function DUF1451
YP_928454.1	leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase
YP_928455.1	KEGG: son:SO1173 rare lipoprotein B
YP_928456.1	KEGG: son:SO1172 DNA polymerase III delta subunit
YP_928457.1	KEGG: sdn:Sden_0794 nicotinate-nucleotide adenylyltransferase
YP_928458.1	KEGG: son:SO1170 iojap domain protein
YP_928459.1	SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA
YP_928460.1	KEGG: son:SO1168 penicillin-binding protein 2
YP_928461.1	KEGG: son:SO1167 rod shape-determining protein RodA
YP_928462.1	KEGG: sdn:Sden_0853 lytic murein transglycosylase B
YP_928463.1	KEGG: sdn:Sden_0852 rare lipoprotein A
YP_928464.1	KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase
YP_928465.1	KEGG: son:SO1163 hypothetical protein
YP_928466.1	lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein
YP_928467.1	catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group
YP_928468.1	KEGG: son:SO1160 ribosomal-protein-alanine acetyltransferase
YP_928470.1	KEGG: son:SO1158 Dps family protein
YP_928471.1	KEGG: pha:PSHAb0175 conserved protein of unknown function ; putative lipoprotein
YP_928472.1	KEGG: son:SO3575 CDP-diacylglycerol--serine O-phosphatidyltransferase, putative
YP_928473.1	KEGG: son:SO3576 hypothetical protein
YP_928474.1	KEGG: she:Shewmr4_2466 transposase IS200-family protein
YP_928475.1	KEGG: son:SO3577 clpB protein
YP_928476.1	KEGG: son:SO3578 conserved hypothetical protein TIGR00726
YP_928477.1	KEGG: sdn:Sden_2863 pseudouridine synthase, RluD
YP_928478.1	KEGG: son:SO3580 putative lipoprotein
YP_928479.1	KEGG: sdn:Sden_0712 chemotaxis sensory transducer
YP_928480.1	KEGG: sdn:Sden_1662 GGDEF domain protein
YP_928481.1	KEGG: son:SO3838 methyl-accepting chemotaxis protein
YP_928482.1	catalyzes the formation of L-proline from L-ornithine
YP_928483.1	KEGG: son:SO3840 RNA polymerase sigma-70 factor, ECF subfamily
YP_928484.1	KEGG: son:SO3841 hypothetical protein
YP_928485.1	KEGG: son:SO3842 hypothetical protein
YP_928486.1	KEGG: sdn:Sden_1090 pseudouridine synthase, Rsu
YP_928487.1	KEGG: son:SO3844 peptidase, M13 family
YP_928488.1	KEGG: son:SO3847 hypothetical protein
YP_928489.1	KEGG: son:SO3848 hypothetical protein
YP_928490.1	KEGG: sdn:Sden_0738 TonB-dependent receptor
YP_928491.1	KEGG: son:SO0914 hypothetical protein
YP_928492.1	KEGG: sdn:Sden_0737 protein of unknown function DUF1456
YP_928493.1	malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate
YP_928494.1	KEGG: son:SO3856 hypothetical protein
YP_928495.1	KEGG: son:SO3859 cyclic nucleotide phosphodiesterase, putative
YP_928496.1	KEGG: son:SO3860 hypothetical protein
YP_928497.1	KEGG: son:SO3861 iron-sulfur cluster-binding protein
YP_928498.1	KEGG: bcn:Bcen_6124 protein of unknown function DUF1458
YP_928499.1	catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine
YP_928500.1	KEGG: son:SO0817 transcriptional activator protein MetR
YP_928501.1	KEGG: son:SO0816 hypothetical protein
YP_928502.1	KEGG: noc:Noc_1154 lipolytic enzyme, G-D-S-L
YP_928503.1	KEGG: son:SO0815 TonB-dependent receptor C-terminal domain protein
YP_928504.1	KEGG: sdn:Sden_0728 hypothetical protein
YP_928505.1	KEGG: cps:CPS_3606 hypothetical protein
YP_928506.1	KEGG: ppr:PBPRB0302 conserved hypothetical protein
YP_928507.1	KEGG: son:SO1278 methyl-accepting chemotaxis protein
YP_928508.1	catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate
YP_928509.1	KEGG: son:SO1275 succinate-semialdehyde dehydrogenase (NADP+)
YP_928510.1	KEGG: son:SO1274 probable oxidoreductase
YP_928511.1	KEGG: sdn:Sden_3028 binding-protein-dependent transport systems inner membrane component
YP_928512.1	KEGG: sdn:Sden_3029 binding-protein-dependent transport systems inner membrane component
YP_928513.1	KEGG: son:SO1271 polyamine ABC transporter, ATP-binding protein
YP_928514.1	KEGG: son:SO1270 polyamine ABC transporter, periplasmic polyamine-binding protein
YP_928515.1	KEGG: cps:CPS_4663 aminotransferase, class III
YP_928516.1	KEGG: sdn:Sden_3032 glutamate--ammonia ligase
YP_928517.1	KEGG: son:SO1267 hypothetical glutamine amidotransferase
YP_928518.1	KEGG: son:SO1265 transcriptional regulator, putative
YP_928519.1	KEGG: son:SO1264 hypothetical oxidoreductase
YP_928520.1	KEGG: son:SO3496 aldehyde dehydrogenase
YP_928521.1	catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate
YP_928522.1	KEGG: hch:HCH_01157 methylmalonate-semialdehyde dehydrogenase
YP_928523.1	KEGG: son:SO3501 hypothetical protein
YP_928524.1	KEGG: son:SO3502 hypothetical protein
YP_928525.1	KEGG: shm:Shewmr7_1247 hypothetical protein
YP_928526.1	KEGG: son:SO3374 hypothetical protein
YP_928527.1	KEGG: tbd:Tbd_0710 hypothetical protein
YP_928528.1	KEGG: tbd:Tbd_0709 putative signal peptide protein
YP_928529.1	KEGG: son:SO1090 ApbE family protein, putative
YP_928530.1	KEGG: tcx:Tcr_0415 hypothetical protein
YP_928531.1	KEGG: cps:CPS_2089 hypothetical protein
YP_928532.1	KEGG: sdn:Sden_2522 AFG1-like ATPase
YP_928533.1	KEGG: pha:PSHAa2185 amidohydrolase
YP_928534.1	KEGG: bbr:BB1160 putative LysR-family transcriptional regulator
YP_928535.1	catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme
YP_928536.1	KEGG: son:SO3761 hypothetical protein
YP_928537.1	KEGG: son:SO3762 hypothetical protein
YP_928538.1	catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine
YP_928539.1	KEGG: son:SO3764 hypothetical protein
YP_928540.1	KEGG: sdn:Sden_0697 PspA/IM30
YP_928541.1	KEGG: son:SO3766 hypothetical protein
YP_928542.1	KEGG: son:SO3767 hypothetical protein
YP_928543.1	KEGG: son:SO3768 ion transporter
YP_928544.1	KEGG: son:SO3769 hypothetical protein
YP_928545.1	KEGG: sdn:Sden_0692 protein of unknown function DUF47
YP_928546.1	KEGG: sdn:Sden_0691 phosphate transporter
YP_928547.1	KEGG: son:SO3772 SH3 domain protein
YP_928548.1	proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain
YP_928549.1	KEGG: son:SO3777 hypothetical protein
YP_928550.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_928551.1	in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c
YP_928552.1	KEGG: son:SO3782 hypothetical protein
YP_928553.1	KEGG: sdn:Sden_3482 nitrite reductase, copper containing
YP_928554.1	KEGG: sdn:Sden_3481 hypothetical protein
YP_928555.1	KEGG: sdn:Sden_3480 electron transport protein SCO1/SenC
YP_928556.1	KEGG: sdn:Sden_3479 protein of unknown function DUF461
YP_928557.1	catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase-like protein; KEGG: sdn:Sden_3444 cyclic nucleotide-binding
YP_928558.1	KEGG: son:SO1605 lipoprotein, putative
YP_928559.1	KEGG: son:SO3783 ATP-dependent RNA helicase, DEAD box family
YP_928560.1	KEGG: bbr:BB2475 hypothetical protein
YP_928561.1	KEGG: cps:CPS_4904 hypothetical protein
YP_928562.1	KEGG: mca:MCA2045 transcriptional regulator, MarR family
YP_928564.1	KEGG: vpa:VPA1414 hypothetical protein
YP_928565.1	KEGG: cps:CPS_3143 phenazine biosynthesis protein, PhzF family
YP_928566.1	KEGG: ppr:PBPRA1652 hypothetical protein
YP_928567.1	KEGG: pha:PSHAa2901 periplasmic peptidyl-prolyl cis-trans isomerase
YP_928568.1	KEGG: son:SO4539 serine protease, subtilase family
YP_928569.1	KEGG: sde:Sde_0548 PAS/PAC sensor signal transduction histidine kinase
YP_928571.1	KEGG: pha:PSHAa0853 response regulator (activator) in two-component regulatory
YP_928572.1	KEGG: pha:PSHAa0854 sensory histidine kinase in two-component regulatory system with RstA
YP_928573.1	KEGG: mst:Msp_0035 predicted peptidyl-prolyl cis-trans isomerase 1
YP_928574.1	KEGG: she:Shewmr4_2190 hypothetical protein
YP_928575.1	KEGG: son:SO0540 hypothetical protein
YP_928576.1	KEGG: hch:HCH_01597 sterol desaturase
YP_928577.1	KEGG: cps:CPS_2285 hypothetical protein
YP_928578.1	KEGG: cps:CPS_2286 hypothetical protein
YP_928579.1	KEGG: rfr:Rfer_2441 carboxymuconolactone decarboxylase
YP_928580.1	KEGG: pca:Pcar_1086 conserved hypothetical signal peptide protein
YP_928581.1	KEGG: pfl:PFL_2420 D-isomer specific 2-hydroxyacid dehydrogenase family protein
YP_928582.1	KEGG: rso:RSc0630 hypothetical protein
YP_928583.1	KEGG: yps:YPTB1990 hypothetical protein
YP_928584.1	KEGG: bcn:Bcen_5825 transcriptional regulator, AraC family
YP_928585.1	KEGG: hch:HCH_03335 thiol:disulfide interchange protein
YP_928586.1	KEGG: hch:HCH_03334 thiol-disulfide isomerase and thioredoxins
YP_928587.1	KEGG: bfs:BF2896 putative regulatory protein
YP_928589.1	KEGG: rxy:Rxyl_0586 transcriptional regulator, XRE family
YP_928590.1	KEGG: xac:XAC1494 hypothetical protein
YP_928591.1	acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine
YP_928592.1	part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor
YP_928593.1	catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein
YP_928594.1	KEGG: sdn:Sden_0832 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_928595.1	KEGG: son:SO0777 2-octaprenyl-6-methoxyphenol hydroxylase
YP_928596.1	KEGG: sdn:Sden_0830 YgfB and YecA
YP_928597.1	KEGG: sdn:Sden_0829 protein of unknown function DUF710
YP_928598.1	KEGG: son:SO0774 5-formyltetrahydrofolate cyclo-ligase family protein
YP_928599.1	KEGG: ppr:PBPRB1899 hypothetical protein
YP_928600.1	KEGG: ppr:PBPRB1900 hypothetical protein
YP_928603.1	KEGG: psb:Psyr_0171 EAL
YP_928604.1	KEGG: sdn:Sden_1799 NAD(P)H dehydrogenase (quinone)
YP_928605.1	KEGG: sdn:Sden_1798 regulatory protein, MerR
YP_928606.1	KEGG: vpa:VPA0296 putative oxidoreductase protein
YP_928607.1	KEGG: sdn:Sden_1821 protein of unknown function DUF808
YP_928608.1	Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway
YP_928609.1	KEGG: son:SO0952 single-stranded-DNA-specific exonuclease RecJ
YP_928610.1	KEGG: son:SO0951 thiol:disulfide interchange protein DsbC
YP_928611.1	KEGG: son:SO0950 integrase/recombinase XerD
YP_928612.1	KEGG: son:SO0949 branched-chain amino acid transport system II carrier protein BrnQ
YP_928613.1	KEGG: son:SO0948 hypothetical protein
YP_928614.1	facilitates an early step in the assembly of the 50S subunit of the ribosome
YP_928615.1	KEGG: son:SO0946 hypothetical protein
YP_928616.1	KEGG: son:SO0945 AcrB/AcrD/AcrF family protein
YP_928617.1	KEGG: son:SO0944 hypothetical protein
YP_928618.1	KEGG: son:SO0943 sensory box protein, putative
YP_928619.1	KEGG: son:SO0942 hypothetical protein
YP_928620.1	KEGG: son:SO0941 hypothetical protein
YP_928621.1	KEGG: son:SO0940 transcriptional regulator-related protein
YP_928622.1	KEGG: son:SO0939 cytochrome c, putative
YP_928623.1	KEGG: son:SO0938 hypothetical protein
YP_928625.1	KEGG: son:SO0935 Na+/H+ antiporter
YP_928626.1	KEGG: son:SO0934 hypothetical protein
YP_928627.1	KEGG: rsp:RSP_2375 hypothetical protein
YP_928628.1	class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis
YP_928629.1	Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway
YP_928630.1	NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate
YP_928631.1	catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase
YP_928632.1	catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase
YP_928633.1	KEGG: son:SO0927 hypothetical protein
YP_928634.1	KEGG: vvu:VV13056 FOG: EAL domain
YP_928635.1	KEGG: son:SO0926 acetyltransferase, GNAT family
YP_928636.1	KEGG: son:SO0925 GGDEF domain protein protein
YP_928637.1	KEGG: son:SO0925 GGDEF domain protein protein
YP_928638.1	KEGG: son:SO0924 hypothetical protein
YP_928639.1	KEGG: son:SO0923 hypothetical protein
YP_928640.1	KEGG: son:SO0922 proton/glutamate symporter
YP_928641.1	KEGG: son:SO0921 hypothetical protein
YP_928642.1	KEGG: sdn:Sden_0864 GCN5-related N-acetyltransferase
YP_928643.1	KEGG: yps:YPTB1647 L-serine dehydratase
YP_928644.1	KEGG: shm:Shewmr7_3262 amino acid transporter, transmembrane
YP_928645.1	KEGG: son:SO0918 aculeacin A acylase
YP_928646.1	pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog
YP_928647.1	KEGG: son:SO0916 putative acetyltransferase
YP_928648.1	KEGG: son:SO0900 oxidoreductase, aldo/keto reductase family
YP_928649.1	KEGG: son:SO3789 aminotransferase, class V
YP_928650.1	KEGG: son:SO3790 hypothetical protein
YP_928651.1	KEGG: son:SO3791 renal dipeptidase family protein
YP_928654.1	KEGG: sco:SCO6138 putative transmembrane protein
YP_928655.1	KEGG: sdn:Sden_2840 protein of unknown function DUF368
YP_928656.1	KEGG: sdn:Sden_2841 hypothetical protein
YP_928657.1	KEGG: sdn:Sden_2876 pseudouridine synthase, Rsu
YP_928658.1	KEGG: son:SO3584 hypothetical protein
YP_928659.1	KEGG: son:SO3585 azoreductase, putative
YP_928660.1	KEGG: ilo:IL1591 glyoxalase/dioxygenase superfamily protein
YP_928661.1	KEGG: son:SO3586 glyoxalase family protein
YP_928662.1	KEGG: vfi:VF1779 tellurite resistance protein TehB
YP_928663.1	KEGG: son:SO3587 hypothetical protein
YP_928664.1	KEGG: ppr:PBPRB0529 hypothetical acetyltransferase
YP_928665.1	KEGG: son:SO3591 hypothetical protein
YP_928666.1	KEGG: sdn:Sden_3016 (acyl-carrier-protein) S-malonyltransferase
YP_928667.1	KEGG: sdn:Sden_3017 transketolase, central region
YP_928668.1	KEGG: sdn:Sden_3018 acyl-CoA dehydrogenase-like protein
YP_928669.1	KEGG: sdn:Sden_3019 regulatory protein, LysR
YP_928670.1	KEGG: son:SO3592 putative outer membrane protein
YP_928671.1	KEGG: son:SO3593 hypothetical protein
YP_928672.1	KEGG: son:SO3594 transcriptional regulatory protein RstA, putative
YP_928673.1	KEGG: son:SO3595 sensor protein RstB, putative
YP_928674.1	KEGG: son:SO3596 hypothetical protein
YP_928675.1	KEGG: son:SO3597 hypothetical protein
YP_928676.1	KEGG: son:SO3611 ATPase, AAA family
YP_928677.1	KEGG: son:SO3603 secretion protein, HlyD family
YP_928678.1	KEGG: vfi:VFA0380 hypothetical protein
YP_928679.1	non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis
YP_928680.1	KEGG: son:SO1188 hypothetical protein
YP_928681.1	KEGG: son:SO1189 lysozyme
YP_928682.1	KEGG: son:SO1190 hypothetical protein
YP_928683.1	KEGG: son:SO3631 glycerate dehydrogenase
YP_928684.1	KEGG: son:SO3632 hypothetical protein
YP_928685.1	functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system
YP_928686.1	KEGG: sdn:Sden_2883 nucleotidyl transferase
YP_928687.1	KEGG: son:SO3635 hypothetical phosphotransferase
YP_928688.1	KEGG: son:SO3636 organic solvent tolerance protein
YP_928689.1	KEGG: son:SO3637 survival protein surA
YP_928690.1	catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate)
YP_928691.1	catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin
YP_928692.1	protein associated with Co2+ and Mg2+ efflux
YP_928693.1	hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP
YP_928694.1	KEGG: son:SO3642 methyl-accepting chemotaxis protein
YP_928695.1	KEGG: son:SO3645 hypothetical protein
YP_928696.1	KEGG: son:SO3646 dihydrofolate reductase
YP_928697.1	KEGG: son:SO3647 hypothetical protein
YP_928698.1	KEGG: son:SO3648 hypothetical protein
YP_928699.1	essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication
YP_928700.1	involved in the peptidyltransferase reaction during translation
YP_928701.1	KEGG: sdn:Sden_2927 ribosomal protein L21
YP_928702.1	KEGG: son:SO3653 octaprenyl-diphosphate synthase
YP_928703.1	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
YP_928704.1	KEGG: son:SO3656 hypothetical protein
YP_928705.1	KEGG: son:SO3657 transporter, LysE family
YP_928706.1	KEGG: son:SO3660 sigma-54 dependent transcriptional regulator/sensory box protein
YP_928707.1	KEGG: sdn:Sden_2933 4Fe-4S ferredoxin, iron-sulfur binding
YP_928708.1	KEGG: son:SO3659 thiol:disulfide interchange protein, putative
YP_928709.1	catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite
YP_928710.1	hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide
YP_928711.1	KEGG: pha:PSHAa0154 sulfite reductase subunit alpha
YP_928712.1	forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm
YP_928713.1	catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme
YP_928714.1	KEGG: sde:Sde_1876 cold shock protein
YP_928715.1	KEGG: rfe:RF_0935 hypothetical protein
YP_928716.1	KEGG: dsy:DSY4340 hypothetical protein
YP_928718.1	KEGG: par:Psyc_1937 hypothetical protein
YP_928719.1	KEGG: cps:CPS_1258 putative MFS transporter family protein
YP_928720.1	KEGG: pha:PSHAa0857 SpoOM-related protein
YP_928721.1	KEGG: son:SO1907 transcriptional regulator, LysR family
YP_928722.1	KEGG: pat:Patl_2972 DoxX
YP_928723.1	KEGG: son:SO1505 transporter, putative
YP_928725.1	KEGG: sdn:Sden_0976 UspA
YP_928726.1	KEGG: shm:Shewmr7_3149 hypothetical protein
YP_928727.1	KEGG: son:SO3683 coniferyl aldehyde dehydrogenase
YP_928728.1	KEGG: son:SO3684 transcriptional regulator, TetR family
YP_928729.1	KEGG: son:SO3685 curli production assembly/transport component CsgG, putative
YP_928730.1	KEGG: son:SO3686 curli production assembly/transport component CsgF, putative
YP_928731.1	KEGG: sdn:Sden_0969 curli production assembly/transport component CsgE, putative
YP_928732.1	KEGG: sdn:Sden_2846 ATP-binding region, ATPase-like protein
YP_928733.1	KEGG: son:SO3689 sigma-54 dependent nitrogen response regulator
YP_928734.1	KEGG: sdn:Sden_2848 protein of unknown function DUF214
YP_928735.1	KEGG: sdn:Sden_2849 protein of unknown function DUF214
YP_928736.1	KEGG: sdn:Sden_2850 ABC transporter related
YP_928737.1	KEGG: son:SO3694 HlyD family secretion protein
YP_928738.1	KEGG: son:SO3708 hypothetical protein
YP_928739.1	KEGG: noc:Noc_1690 hypothetical protein
YP_928740.1	KEGG: pat:Patl_2439 hypothetical protein
YP_928741.1	KEGG: son:SO3709 ABC transporter, periplasmic substrate-binding protein, putative
YP_928742.1	catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis
YP_928743.1	KEGG: hch:HCH_00660 response regulator containing a CheY-like receiver domain and a GGDEF domain protein
YP_928744.1	KEGG: vvy:VV1083 hypothetical protein
YP_928745.1	KEGG: cps:CPS_3455 hypothetical protein
YP_928746.1	KEGG: cps:CPS_3456 SPFH domain/Band 7 family protein
YP_928747.1	KEGG: ilo:IL2514 outer membrane protein
YP_928749.1	class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1
YP_928750.1	KEGG: sdn:Sden_3128 peptide chain release factor 2
YP_928751.1	KEGG: hch:HCH_00361 uncharacterized low-complexity protein
YP_928752.1	KEGG: son:SO0987 methyl-accepting chemotaxis protein
YP_928753.1	KEGG: son:SO3719 hypothetical protein
YP_928754.1	KEGG: son:SO3720 protoporphyrinogen oxidase
YP_928755.1	KEGG: sdn:Sden_0720 major facilitator superfamily MFS_1
YP_928756.1	KEGG: son:SO3722 hypothetical protein
YP_928757.1	KEGG: vch:VC1810 hypothetical protein
YP_928758.1	KEGG: dps:DP1920 hypothetical protein
YP_928759.1	KEGG: cps:CPS_2394 GGDEF domain protein protein
YP_928760.1	converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis
YP_928761.1	KEGG: ppr:PBPRA3309 putative sodium/sulfate symporter
YP_928762.1	KEGG: pha:PSHAa0211 ATP-sulfurylase subunit 1
YP_928763.1	with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP
YP_928764.1	KEGG: sdn:Sden_0958 uroporphyrin-III C-methyltransferase
YP_928765.1	KEGG: sdn:Sden_0955 phospholipase A1
YP_928766.1	KEGG: son:SO3731 hypothetical protein
YP_928767.1	KEGG: son:SO3733 hypothetical protein
YP_928768.1	KEGG: pha:PSHAb0299 putative TonB-dependent outer membrane receptor
YP_928769.1	KEGG: son:SO3664 long-chain-fatty-acid--CoA ligase
YP_928770.1	KEGG: son:SO1708 4-hydroxybutyrate coenzyme A transferase
YP_928771.1	KEGG: son:SO1661 transcriptional regulator, LysR family
YP_928772.1	KEGG: son:SO4571 transcriptional regulator, LysR family
YP_928774.1	KEGG: hdu:HD0347 nitrate reductase, cytochrome-C type protein
YP_928775.1	KEGG: hit:NTHI1227 NrfC, Fe-S-cluster-containing hydrogenase component 1
YP_928776.1	KEGG: son:SO4568 formate-dependent nitrite reductase, nrfD protein
YP_928777.1	KEGG: dsy:DSY4538 hypothetical protein
YP_928778.1	KEGG: son:SO1697 hypothetical protein
YP_928779.1	KEGG: sde:Sde_3020 hypothetical protein
YP_928780.1	KEGG: son:SO3665 ABC transporter, ATP-binding/permease protein, putative
YP_928782.1	KEGG: son:SO3678 hypothetical protein
YP_928783.1	KEGG: son:SO3679 hypothetical protein
YP_928784.1	KEGG: sde:Sde_3048 hypothetical protein
YP_928785.1	KEGG: ilo:IL1563 hypothetical protein
YP_928786.1	KEGG: vpa:VPA0111 hypothetical protein
YP_928787.1	KEGG: sdn:Sden_3307 extracellular solute-binding protein, family 3
YP_928788.1	KEGG: hch:HCH_04108 predicted permease, DMT superfamily
YP_928789.1	KEGG: son:SO1059 aminopeptidase N
YP_928790.1	KEGG: sdn:Sden_0469 glycerophosphoryl diester phosphodiesterase
YP_928791.1	KEGG: eca:ECA1907 DeoR-family transcriptional regulator
YP_928792.1	KEGG: pfo:Pfl_3782 major facilitator superfamily MFS_1
YP_928793.1	KEGG: pat:Patl_2539 serine-type D-Ala-D-Ala carboxypeptidase
YP_928794.1	KEGG: tma:TM1189 hypothetical protein
YP_928795.1	KEGG: son:SO0807 hypoxanthine-guanine phosphoribosyltransferase
YP_928796.1	KEGG: son:SO0806 alkaline phosphatase, putative
YP_928797.1	KEGG: son:SO0805 CBS domain protein
YP_928798.1	KEGG: son:SO1048 hypothetical protein
YP_928799.1	KEGG: son:SO1047 holin-like protein
YP_928800.1	KEGG: son:SO1046 transcriptional regulator, LysR family
YP_928801.1	KEGG: son:SO1045 hypothetical protein
YP_928802.1	KEGG: eba:ebA6078 hypothetical protein
YP_928803.1	KEGG: pae:PA1029 hypothetical protein
YP_928804.1	catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive
YP_928805.1	KEGG: sdn:Sden_0724 heat shock protein DnaJ-like protein
YP_928806.1	KEGG: son:SO3718 thiol:disulfide interchange protein, DsbA family
YP_928807.1	KEGG: son:SO1087 Na+/H+ antiporter family protein
YP_928808.1	KEGG: son:SO1086 hypothetical protein
YP_928809.1	KEGG: sfr:Sfri_0572 pseudouridine synthase, Rsu
YP_928810.1	KEGG: son:SO1075 hypothetical protein
YP_928811.1	KEGG: son:SO1074 tyrosine-specific transport protein, putative
YP_928812.1	KEGG: son:SO1071 hypothetical protein
YP_928813.1	KEGG: son:SO1070 catalase
YP_928814.1	KEGG: vch:VCA0275 IS1004 transposase
YP_928815.1	KEGG: sdn:Sden_3091 hypothetical protein
YP_928816.1	KEGG: son:SO1068 hypothetical protein
YP_928817.1	KEGG: son:SO1066 extracellular nuclease
YP_928818.1	KEGG: son:SO0866 minor curlin subunit CsgB, putative
YP_928819.1	KEGG: son:SO0865 hypothetical protein
YP_928820.1	KEGG: she:Shewmr4_0720 transcriptional regulator, LuxR family
YP_928821.1	catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate
YP_928822.1	KEGG: son:SO0861 hypothetical protein
YP_928823.1	KEGG: son:SO0860 response regulator
YP_928824.1	KEGG: son:SO0859 sensory box histidine kinase/response regulator
YP_928825.1	KEGG: son:SO0858 sodium:alanine symporter family protein
YP_928826.1	KEGG: ppr:PBPRA0130 hypothetical protein
YP_928827.1	KEGG: son:SO0857 ABC transporter, ATP-binding protein
YP_928828.1	KEGG: son:SO0856 putative ABC transport system permease protein
YP_928829.1	KEGG: son:SO0855 hypothetical protein
YP_928830.1	KEGG: son:SO3699.1 hypothetical protein
YP_928831.1	KEGG: ecs:ECs5257 hypothetical protein
YP_928832.1	KEGG: osa:P0694A04.9 putative myosin heavy chain-like protein
YP_928833.1	KEGG: cps:CPS_2742 ISCps7, transposase
YP_928834.1	KEGG: vvy:VVA0678 hypothetical protein
YP_928835.1	KEGG: sdn:Sden_0927 cold-shock protein, DNA-binding
YP_928836.1	KEGG: spn:SP1772 cell wall surface anchor family protein
YP_928837.1	KEGG: son:SO1149 hypothetical SAM-dependent methyltransferase
YP_928838.1	KEGG: son:SO1148 hypothetical protein
YP_928839.1	KEGG: hch:HCH_06920 hypothetical protein
YP_928841.1	KEGG: sdn:Sden_0863 nitroreductase
YP_928842.1	KEGG: tbd:Tbd_2693 putative diguanylate cyclase (GGDEF domain protein)
YP_928843.1	KEGG: son:SO0633 penicillin-binding protein 1B
YP_928844.1	KEGG: son:SO0632 ATP-dependent helicase HrpB
YP_928845.1	KEGG: son:SO0628 GGDEF domain protein protein
YP_928846.1	KEGG: son:SO0627 putative 2'-5' RNA ligase
YP_928847.1	KEGG: son:SO0877 acetyltransferase, GNAT family
YP_928848.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928849.1	Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.
YP_928850.1	Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm
YP_928851.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928852.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928853.1	uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm
YP_928854.1	KEGG: son:SO0849 napD protein
YP_928855.1	periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC
YP_928856.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway
YP_928857.1	part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA
YP_928858.1	KEGG: son:SO0845 cytochrome c-type protein NapB
YP_928859.1	specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport
YP_928860.1	KEGG: son:SO2865 L-lysine exporter, putative
YP_928861.1	KEGG: tdn:Tmden_1328 diguanylate cyclase (GGDEF domain protein)
YP_928862.1	KEGG: son:SO3140.2 hypothetical protein
YP_928863.1	KEGG: sde:Sde_1353 TonB-dependent receptor
YP_928864.1	membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues
YP_928865.1	KEGG: cvi:CV3218 probable translation initiation protein, SUA5/YciO/YrdC family
YP_928866.1	KEGG: son:SO0895 pirin family protein
YP_928867.1	KEGG: sdn:Sden_3177 hypothetical protein
YP_928868.1	KEGG: son:SO0885 ABC transporter, ATP-binding protein
YP_928869.1	KEGG: sdn:Sden_3179 hypothetical protein
YP_928870.1	KEGG: son:SO0882 oxidoreductase, GMC family
YP_928871.1	KEGG: son:SO0881 hypothetical protein
YP_928872.1	KEGG: son:SO0880 hypothetical protein
YP_928873.1	KEGG: sdn:Sden_3187 protein of unknown function UPF0270
YP_928874.1	KEGG: son:SO0878 phosphoribulokinase
YP_928875.1	KEGG: son:SO0625 hypothetical protein
YP_928876.1	complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons
YP_928877.1	KEGG: son:SO0623 hypothetical protein
YP_928878.1	KEGG: shm:Shewmr7_3414 two component transcriptional regulator, winged helix family
YP_928879.1	KEGG: son:SO0621 sensor histidine kinase
YP_928880.1	KEGG: son:SO0620 hypothetical protein
YP_928881.1	a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH
YP_928882.1	KEGG: son:SO0618 arginine N-succinyltransferase
YP_928883.1	DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate
YP_928884.1	KEGG: son:SO0616 esterase, putative
YP_928885.1	KEGG: son:SO0615 hypothetical protein
YP_928886.1	KEGG: son:SO0614 dipeptidyl peptidase IV, putative
YP_928887.1	KEGG: son:SO0613 para-aminobenzoate synthase glutamine amidotransferase, component II
YP_928888.1	KEGG: fra:Francci3_2523 diguanylate cyclase (GGDEF domain protein)
YP_928889.1	KEGG: son:SO0612 stringent starvation protein b
YP_928890.1	transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation
YP_928891.1	KEGG: son:SO0610 ubiquinol-cytochrome c reductase cytochrome c1 subunit
YP_928892.1	KEGG: son:SO0609 ubiquinol-cytochrome c reductase, cytochrome b
YP_928893.1	KEGG: sdn:Sden_3201 ubiquinol-cytochrome c reductase, iron-sulfur subunit
YP_928894.1	KEGG: son:SO0606 hflC protein
YP_928895.1	KEGG: son:SO0605 hflK protein
YP_928896.1	KEGG: son:SO0604 GTP-binding protein HflX
YP_928897.1	KEGG: son:SO0603 host factor-I protein
YP_928898.1	IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity
YP_928899.1	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
YP_928900.1	KEGG: sdn:Sden_3208 N-acetylmuramoyl-L-alanine amidase
YP_928901.1	KEGG: son:SO0599 conserved hypothetical protein TIGR00150
YP_928902.1	KEGG: son:SO0598 YjeF protein
YP_928903.1	KEGG: son:SO0595 hypothetical protein
YP_928904.1	3'-5' exoribonuclease specific for small oligoribonuclotides
YP_928905.1	EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity
YP_928906.1	catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine
YP_928907.1	KEGG: cps:CPS_3514 membrane protein
YP_928908.1	KEGG: son:SO0588 transporter, putative
YP_928909.1	KEGG: sdn:Sden_3215 glycerophosphoryl diester phosphodiesterase
YP_928910.1	KEGG: vfi:VF1559 hypothetical protein
YP_928911.1	KEGG: son:SO0585 D-isomer specific 2-hydroxyacid dehydrogenase family protein
YP_928912.1	KEGG: son:SO0583 bacterioferritin-associated ferredoxin
YP_928913.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_928914.1	KEGG: son:SO3898 L-sorbosone dehydrogenase, putative
YP_928915.1	decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling
YP_928916.1	KEGG: son:SO3900 hypothetical protein
YP_928917.1	KEGG: son:SO3901 lacZ expression regulator
YP_928918.1	KEGG: son:SO3902 hypothetical protein
YP_928919.1	KEGG: son:SO3903 ADP-ribose pyrophosphatase
YP_928920.1	trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell
YP_928921.1	KEGG: son:SO3905 hypothetical protein
YP_928922.1	KEGG: son:SO3906 hypothetical protein
YP_928923.1	KEGG: sfr:Sfri_3335 protein of unknown function DUF461
YP_928924.1	KEGG: son:SO3908 enoyl-CoA hydratase/isomerase family protein
YP_928925.1	KEGG: son:SO3909 hypothetical protein
YP_928927.1	KEGG: son:SO3912 TIM-barrel protein, yjbN family
YP_928928.1	KEGG: son:SO3915 putative chemotaxis protein CheX
YP_928929.1	converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer
YP_928930.1	KEGG: son:SO3917 replicative DNA helicase
YP_928931.1	KEGG: son:SO3918 hypothetical protein
YP_928932.1	KEGG: pat:Patl_1148 TonB-dependent receptor, plug
YP_928933.1	in Escherichia coli this protein is wrapped around the base of the L1 stalk
YP_928934.1	binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit
YP_928935.1	binds single-stranded DNA at the primosome assembly site
YP_928936.1	binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21
YP_928937.1	KEGG: son:SO3931 putative salt-induced outer membrane protein
YP_928938.1	Specifically methylates the ribose of guanosine 2251 in 23S rRNA
YP_928939.1	KEGG: son:SO3935 ribonuclease R
YP_928940.1	KEGG: son:SO3936 sodium-type flagellar protein MotX
YP_928941.1	catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis
YP_928942.1	forms a direct contact with the tRNA during translation
YP_928943.1	in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit
YP_928944.1	KEGG: son:SO3941 hypothetical protein
YP_928945.1	KEGG: son:SO3942 serine protease, HtrA/DegQ/DegS family
YP_928946.1	KEGG: son:SO3943 protease DegS
YP_928947.1	adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active
YP_928948.1	KEGG: sdn:Sden_0501 BolA-like protein
YP_928949.1	KEGG: son:SO3950 SpoIIAA family protein
YP_928950.1	KEGG: son:SO3951 hypothetical protein
YP_928951.1	KEGG: son:SO3952 mce-related protein
YP_928952.1	KEGG: son:SO3953 putative membrane protein
YP_928953.1	KEGG: son:SO3954 ABC transporter, ATP-binding protein, putative
YP_928954.1	KEGG: sdn:Sden_0495 K+-dependent Na+/Ca+ exchanger related-protein
YP_928955.1	KEGG: son:SO3956 carbohydrate isomerase, KpsF/GutQ family
YP_928956.1	forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis
YP_928957.1	KEGG: son:SO3958 hypothetical protein
YP_928958.1	KEGG: sdn:Sden_0491 OstA-like protein
YP_928959.1	KEGG: son:SO3960 ABC transporter, ATP-binding protein
YP_928960.1	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen
YP_928961.1	KEGG: son:SO3962 ribosomal subunit interface protein
YP_928962.1	KEGG: son:SO3963 nitrogen regulatory IIA protein
YP_928963.1	KEGG: son:SO3964 hypothetical protein
YP_928964.1	KEGG: son:SO3965 phosphocarrier protein NPR
YP_928965.1	KEGG: son:SO3966 magnesium transporter
YP_928966.1	KEGG: pae:PA0914 hypothetical protein
YP_928967.1	KEGG: son:SO3967 hypothetical protein
YP_928968.1	KEGG: son:SO3969 OmpA family protein
YP_928969.1	KEGG: son:SO3972 hypothetical transposase
YP_928970.1	KEGG: vvy:VVA0651 GGDEF family protein
YP_928971.1	KEGG: bfs:BF0093 hypothetical protein
YP_928972.1	KEGG: dar:Daro_3644 hypothetical protein
YP_928973.1	KEGG: son:SO4332 hypothetical protein
YP_928974.1	KEGG: ppr:PBPRB1425 hypothetical protein
YP_928975.1	KEGG: son:SO0733 cold shock domain family protein
YP_928976.1	KEGG: son:SO1746 hypothetical protein
YP_928977.1	KEGG: ppr:PBPRB1270 hypothetical protein
YP_928979.1	KEGG: pha:PSHAa0866 hypothetical protein
YP_928980.1	KEGG: vvu:VV20803 uncharacterized protein containing a von Willebrand factor type A (vWA) domain
YP_928981.1	KEGG: vvy:VVA1266 predicted transcriptional regulator
YP_928982.1	KEGG: pat:Patl_2249 multi-sensor hybrid histidine kinase
YP_928983.1	KEGG: pat:Patl_2248 response regulator receiver modulated metal dependent phosphohydrolase
YP_928984.1	KEGG: son:SO3933 hypothetical protein
YP_928985.1	KEGG: sdn:Sden_0686 hypothetical protein
YP_928986.1	KEGG: sdn:Sden_0376 hypothetical protein
YP_928987.1	KEGG: sdn:Sden_0375 GGDEF domain protein
YP_928988.1	KEGG: sdn:Sden_0374 hypothetical protein
YP_928989.1	KEGG: sdn:Sden_0373 globin
YP_928990.1	KEGG: son:SO3490 hypothetical protein
YP_928991.1	KEGG: son:SO4340 hypothetical protein
YP_928992.1	KEGG: noc:Noc_0407 hypothetical protein
YP_928993.1	KEGG: bcn:Bcen_1761 hypothetical protein
YP_928994.1	KEGG: hch:HCH_01378 transposase and inactivated derivatives
YP_928996.1	60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth
YP_928997.1	10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring
YP_928998.1	KEGG: son:SO0702 MATE efflux family protein
YP_929000.1	KEGG: son:SO0578 hypothetical protein
YP_929001.1	KEGG: son:SO0577 sensory box histidine kinase/response regulator
YP_929002.1	KEGG: son:SO0576 PhoH family protein
YP_929003.1	transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA
YP_929004.1	KEGG: ilo:IL1207 predicted metal-dependent amidohydrolase with the TIM-barrel fold
YP_929005.1	KEGG: son:SO0573 hypothetical protein
YP_929006.1	KEGG: cps:CPS_1797 hypothetical protein
YP_929007.1	Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA
YP_929008.1	KEGG: son:SO0570 response regulator
YP_929009.1	KEGG: son:SO0569 sensory box/GGDEF family protein
YP_929010.1	KEGG: son:SO0568 hypothetical protein
YP_929011.1	KEGG: son:SO0567 1-acyl-sn-glycerol-3-phosphate acyltransferase
YP_929012.1	KEGG: son:SO0566 ABC 3 transport family protein
YP_929013.1	KEGG: son:SO0565 adhesion protein, putative
YP_929014.1	KEGG: sdn:Sden_0527 hypothetical protein
YP_929015.1	KEGG: sdn:Sden_0526 hypothetical protein
YP_929016.1	KEGG: son:SO0562 hypothetical protein
YP_929017.1	KEGG: vfi:VFA1107 mechanosensitive ion channel
YP_929018.1	catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate
YP_929019.1	KEGG: vch:VCA0859 oxidoreductase, aldo/keto reductase 2 family
YP_929020.1	KEGG: son:SO0559 MaoC domain protein
YP_929021.1	KEGG: son:SO0558 smtA protein
YP_929022.1	KEGG: sde:Sde_3103 CheD, stimulates methylation of MCP proteins
YP_929023.1	KEGG: son:SO0557 hypothetical protein
YP_929024.1	KEGG: sdn:Sden_0671 hypothetical protein
YP_929025.1	KEGG: son:SO0555 hypothetical protein
YP_929026.1	KEGG: son:SO0554 hypothetical protein
YP_929027.1	KEGG: son:SO0551 hypothetical protein
YP_929028.1	KEGG: son:SO0550 hypothetical protein
YP_929029.1	KEGG: son:SO0549 chemotaxis protein CheY/response regulator receiver domain protein
YP_929030.1	KEGG: sdn:Sden_0658 histone-like DNA-binding protein
YP_929031.1	KEGG: son:SO0547 hypothetical protein
YP_929032.1	KEGG: son:SO0546 ribosomal protein S6 modification protein
YP_929033.1	KEGG: son:SO0545 response regulator
YP_929034.1	KEGG: shm:Shewmr7_3486 response regulator receiver protein
YP_929035.1	KEGG: son:SO0544 sensory box histidine kinase
YP_929036.1	KEGG: son:SO0543 hypothetical protein
YP_929037.1	KEGG: son:SO0542 hypothetical protein
YP_929038.1	KEGG: sdn:Sden_0649 amino acid carrier protein
YP_929039.1	KEGG: sdn:Sden_0648 hypothetical protein
YP_929041.1	MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor
YP_929042.1	multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways
YP_929043.1	KEGG: son:SO4056 cystathionine gamma-synthase
YP_929044.1	when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis
YP_929045.1	KEGG: sdn:Sden_0613 protein of unknown function DUF81
YP_929046.1	KEGG: sec:SC4121 putative outer membrane or exported
YP_929047.1	KEGG: son:SO4060 polysulfide reductase, subunit C
YP_929048.1	KEGG: son:SO4061 polysulfide reductase, subunit B
YP_929049.1	KEGG: son:SO4062 polysulfide reductase, subunit A
YP_929050.1	KEGG: son:SO4142 cytochrome c family protein
YP_929051.1	KEGG: son:SO4143 hypothetical protein
YP_929052.1	KEGG: son:SO4144 cytochrome c, putative
YP_929053.1	KEGG: son:SO4150 transporter, putative
YP_929054.1	KEGG: son:SO4155 sensor histidine kinase
YP_929055.1	KEGG: son:SO4157 DNA-binding response regulator
YP_929056.1	KEGG: pfo:Pfl_3712 cupin region
YP_929057.1	KEGG: son:SO1144 methyl-accepting chemotaxis protein
YP_929058.1	KEGG: sdn:Sden_0602 response regulator receiver
YP_929059.1	KEGG: son:SO4173 sensor histidine kinase
YP_929060.1	KEGG: son:SO0520 heavy metal efflux pump, CzcA family
YP_929061.1	KEGG: sdn:Sden_0575 secretion protein HlyD
YP_929062.1	KEGG: son:SO0516 hypothetical protein
YP_929063.1	KEGG: son:SO0515 hypothetical protein
YP_929064.1	KEGG: son:SO0514 hypothetical protein
YP_929065.1	KEGG: son:SO0513 hypothetical protein
YP_929066.1	KEGG: sdn:Sden_3285 3-dehydroquinate dehydratase, type II
YP_929067.1	KEGG: vpa:VP2880 acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_929068.1	KEGG: noc:Noc_1051 acetyl-CoA carboxylase, biotin carboxylase
YP_929069.1	KEGG: shm:Shewmr7_0410 hypothetical protein
YP_929070.1	KEGG: son:SO4195 PAP2 family protein
YP_929071.1	KEGG: son:SO4196 hypothetical protein
YP_929072.1	regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity
YP_929073.1	KEGG: sdn:Sden_0462 arginase/agmatinase/formiminoglutamase
YP_929074.1	KEGG: son:SO4199 ubiquinone/menaquinone biosynthesis methlytransferase UbiE
YP_929075.1	KEGG: son:SO4200 conserved hypothetical protein
YP_929076.1	KEGG: son:SO4201 ubiquinone biosynthesis protein AarF
YP_929077.1	KEGG: son:SO4202 Sec-independent protein translocase protein TatA
YP_929078.1	KEGG: sdn:Sden_0457 twin-arginine translocation protein TatB
YP_929079.1	KEGG: son:SO4204 Sec-independent periplasmic protein translocation protein TatC
YP_929080.1	KEGG: son:SO4205 hypothetical protein
YP_929081.1	KEGG: son:SO4206 hydrolase, TatD family
YP_929082.1	KEGG: son:SO4207 GGDEF domain protein protein
YP_929083.1	catalyzes the formation of porphobilinogen from 5-aminolevulinate
YP_929084.1	KEGG: son:SO0409 hypothetical protein
YP_929085.1	KEGG: cps:CPS_4791 putative oar protein
YP_929086.1	KEGG: son:SO0408 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase
YP_929087.1	enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation
YP_929088.1	KEGG: sdn:Sden_0448 thioredoxin
YP_929089.1	An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes
YP_929090.1	KEGG: son:SO0402 transcriptional regulator, LysR family
YP_929091.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_929092.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB
YP_929093.1	KEGG: son:SO0397 fumarate reductase cytochrome B subunit
YP_929094.1	part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit
YP_929095.1	KEGG: ilo:IL0249 hypothetical protein
YP_929096.1	methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype
YP_929097.1	KEGG: son:SO0394 tRNA-dihydrouridine synthase B
YP_929098.1	Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription
YP_929099.1	KEGG: rba:RB5426 hypothetical protein
YP_929100.1	KEGG: vvy:VV2752 glycerate kinase
YP_929101.1	KEGG: bpa:BPP0826 hypothetical protein
YP_929103.1	KEGG: son:SO0793 hypothetical protein
YP_929105.1	KEGG: son:SO4077 TonB-dependent receptor, putative
YP_929108.1	KEGG: son:SO4302 hypothetical protein
YP_929109.1	KEGG: lipoprotein, putative
YP_929110.1	KEGG: vch:VC1165 hypothetical protein
YP_929111.1	KEGG: son:SO3896 outer membrane porin, putative
YP_929112.1	KEGG: vpa:VPA0824 putative regulatory protein UhpC
YP_929113.1	KEGG: vch:VCA0706 phosphoglycerate transport regulatory protein PgtC, putative
YP_929114.1	KEGG: ppr:PBPRA2770 hypothetical phosphoglycerate transport regulatory protein PgtB
YP_929115.1	KEGG: ppr:PBPRA2771 phosphoglycerate transport system transcription regulator
YP_929116.1	KEGG: sdn:Sden_0395 divergent AAA region
YP_929117.1	KEGG: son:SO4304 urease accessory protein UreJ
YP_929118.1	KEGG: son:SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein
YP_929119.1	KEGG: son:SO4306 integrase/recombinase XerC
YP_929120.1	KEGG: sfr:Sfri_0446 protein of unknown function DUF484
YP_929121.1	involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate
YP_929122.1	KEGG: son:SO4309 diaminopimelate decarboxylase
YP_929123.1	KEGG: son:SO4310 hypothetical protein
YP_929124.1	KEGG: son:SO4311 CyaY protein
YP_929125.1	catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP
YP_929126.1	transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis
YP_929127.1	KEGG: son:SO4314 uroporphyrinogen-III synthase
YP_929128.1	KEGG: son:SO4315 hemX protein
YP_929129.1	KEGG: son:SO4316 HemY protein
YP_929130.1	KEGG: she:Shewmr4_0384 putative outer membrane adhesin like protein
YP_929131.1	KEGG: son:SO4318 toxin secretion ATP-binding protein
YP_929132.1	KEGG: son:SO4319 HlyD family secretion protein
YP_929133.1	KEGG: sdn:Sden_0381 type I secretion outer membrane protein, TolC
YP_929134.1	KEGG: sdn:Sden_0380 OmpA/MotB
YP_929135.1	KEGG: son:SO4322 hypothetical protein
YP_929136.1	KEGG: son:SO4323 GGDEF domain protein protein
YP_929137.1	KEGG: son:SO4324 GGDEF domain protein protein
YP_929138.1	KEGG: shm:Shewmr7_3650 ATP-dependent DNA helicase Rep
YP_929139.1	KEGG: son:SO4326 transcriptional regulator, TetR family
YP_929140.1	KEGG: son:SO4327 HlyD family secretion domain protein
YP_929141.1	KEGG: vpa:VP0038 putative multidrug resistance protein
YP_929142.1	KEGG: vch:VC1560 catalase/peroxidase
YP_929143.1	KEGG: sdn:Sden_0405 protein of unknown function DUF526
YP_929144.1	KEGG: son:SO4304 urease accessory protein UreJ
YP_929146.1	KEGG: son:SO4334 inner membrane protein, putative
YP_929147.1	KEGG: son:SO4335 phosphatidylglycerophosphatase B, putative
YP_929148.1	KEGG: mag:amb0186 ABC-type amino acid transport/signal transduction systems
YP_929149.1	KEGG: son:SO4343 aminotransferase, class V
YP_929150.1	threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway
YP_929151.1	catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis
YP_929152.1	KEGG: son:SO4346 acetolactate synthase small subunit
YP_929153.1	catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit
YP_929154.1	catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis
YP_929155.1	participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate
YP_929156.1	KEGG: vch:VCA0837 hemolysin, putative
YP_929157.1	KEGG: cvi:CV1638 probable amino acid ABC transporter
YP_929158.1	KEGG: ilo:IL2535 intracellular signaling protein (GAF,GGDEF domain proteins)
YP_929159.1	KEGG: pen:PSEEN3405 periplasmic sugar-binding protein
YP_929160.1	KEGG: son:SO0349 magnesium chelatase family protein
YP_929161.1	KEGG: vvy:VVA0111 hypothetical protein
YP_929162.1	KEGG: son:SO0348 acyltransferase family protein
YP_929163.1	KEGG: son:SO0347 acyltransferase family protein
YP_929164.1	KEGG: ppr:PBPRA3591 hypothetical protein
YP_929165.1	KEGG: son:SO0346 transcriptional regulator GntR family
YP_929166.1	catalyzes the formation of pyruvate and succinate from 2-methylisocitrate
YP_929167.1	catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity
YP_929168.1	Catalyzes the conversion of citrate to isocitrate
YP_929169.1	KEGG: pae:PA0793 hypothetical protein
YP_929170.1	KEGG: son:SO0341 sensory box protein
YP_929171.1	catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids
YP_929172.1	KEGG: mag:amb1653 predicted acyl-CoA transferase/carnitine dehydratase
YP_929173.1	KEGG: son:SO4645 hypothetical protein
YP_929174.1	KEGG: sdn:Sden_1265 propeptide, PepSY amd peptidase M4
YP_929175.1	KEGG: son:SO4647 DNA-binding response regulator
YP_929176.1	KEGG: son:SO4648 sensor histidine kinase
YP_929177.1	KEGG: son:SO0782 hypothetical protein
YP_929178.1	KEGG: son:SO0783 hypothetical protein
YP_929179.1	KEGG: vch:VCA0267 multidrug resistance protein D
YP_929180.1	KEGG: vvy:VVA1441 AraC-type DNA-binding domain-containing protein
YP_929181.1	KEGG: sfr:Sfri_0767 diguanylate cyclase/phosphodiesterase
YP_929182.1	KEGG: stm:STM3065 hypothetical protein
YP_929183.1	KEGG: son:SO4649 hypothetical protein
YP_929184.1	KEGG: dsy:DSY4339 hypothetical protein
YP_929185.1	KEGG: cps:CPS_2871 cold-active alkaline serine protease
YP_929186.1	KEGG: lpp:lpp1568 phospholipase
YP_929187.1	KEGG: hch:HCH_00871 uncharacterized secreted protein
YP_929188.1	KEGG: pfo:Pfl_3287 transcriptional antiterminator, Rof
YP_929189.1	KEGG: son:SO0337 hypothetical translation initiation inhibitor, YjgF family
YP_929190.1	KEGG: son:SO0336 hypothetical Na+/H+ antiporter
YP_929191.1	KEGG: sdn:Sden_0287 protein of unknown function DUF904
YP_929192.1	KEGG: son:SO0334 hypothetical protein
YP_929193.1	KEGG: son:SO0333 thiol:disulfide interchange protein DsbA
YP_929194.1	catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages
YP_929195.1	KEGG: son:SO0331 hypothetical protein
YP_929197.1	KEGG: sdn:Sden_0281 hypothetical protein
YP_929198.1	KEGG: vpa:VPA0976 hypothetical protein
YP_929199.1	KEGG: son:SO0323 hypothetical protein
YP_929200.1	KEGG: sdn:Sden_0280 peptidase S9, prolyl oligopeptidase active site region
YP_929201.1	KEGG: son:SO0322 hypothetical protein
YP_929202.1	KEGG: son:SO0321 hypothetical protein
YP_929203.1	KEGG: son:SO0320 hypothetical protein
YP_929204.1	KEGG: son:SO0318 hypothetical protein
YP_929205.1	KEGG: vch:VCA1065 hypothetical protein
YP_929206.1	KEGG: vch:VCA1063 ornithine decarboxylase, inducible
YP_929207.1	catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system
YP_929208.1	KEGG: son:SO0312 outer membrane porin, putative
YP_929209.1	KEGG: mag:amb2266 homospermidine synthase
YP_929210.1	KEGG: pfl:PFL_2399 hypothetical protein
YP_929211.1	KEGG: pfo:Pfl_0732 GCN5-related N-acetyltransferase
YP_929213.1	KEGG: xcb:XC_0916 transcriptional regulator BlaI family
YP_929214.1	KEGG: xom:XOO_1086 TonB-like protein; predicted signal transduction N-terminal membrane component
YP_929215.1	KEGG: sal:Sala_0117 methionine sulfoxide reductase A
YP_929217.1	KEGG: bth:BT3215 hypothetical protein
YP_929218.1	KEGG: tdn:Tmden_1127 HPP
YP_929219.1	KEGG: bpm:BURPS1710b_0248 transcriptional regulator, MerR family
YP_929220.1	KEGG: vpa:VPA0786 hypothetical protein
YP_929221.1	KEGG: son:SO0311 hypothetical Fe-S oxidoreductase
YP_929222.1	KEGG: son:SO0309 hypothetical protein
YP_929223.1	KEGG: son:SO0308 hypothetical protein
YP_929224.1	KEGG: son:SO0306 hypothetical protein
YP_929225.1	KEGG: sdn:Sden_0274 protein of unknown function UPF0011
YP_929226.1	KEGG: son:SO0300 lipoprotein, putative
YP_929227.1	KEGG: son:SO0299 predicted endonuclease
YP_929228.1	KEGG: son:SO0298 phosphoheptose isomerase
YP_929229.1	KEGG: son:SO0297 lipoprotein, putative
YP_929230.1	KEGG: son:SO0296 integral membrane domain protein
YP_929231.1	KEGG: son:SO0295 transcriptional regulator, LysR family
YP_929232.1	catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA
YP_929233.1	KEGG: son:SO0293 phosphoglycolate phosphatase
YP_929234.1	KEGG: son:SO0292 ribulose-phosphate 3-epimerase
YP_929235.1	KEGG: son:SO0291 hypothetical protein
YP_929236.1	KEGG: son:SO0290 hypothetical protein
YP_929237.1	KEGG: son:SO0289 DNA adenine methylase
YP_929238.1	KEGG: son:SO0288 DamX domain protein
YP_929239.1	KEGG: son:SO0287 3-dehydroquinate synthase
YP_929240.1	type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis
YP_929241.1	KEGG: son:SO0285 type IV pilus biogenesis protein PilQ
YP_929242.1	KEGG: son:SO0284 type IV pilus biogenesis protein PilP
YP_929243.1	KEGG: son:SO0283 type IV pilus biogenesis protein PilO
YP_929244.1	KEGG: son:SO0282 type IV pilus biogenesis protein PilN
YP_929245.1	KEGG: son:SO0281 type IV pilus biogenesis protein PilM
YP_929246.1	KEGG: son:SO0280 penicillin-binding protein 1A
YP_929247.1	catalyzes branch migration in Holliday junction intermediates
YP_929248.1	KEGG: son:SO4365 hypothetical protein
YP_929249.1	KEGG: son:SO4366 hypothetical protein
YP_929250.1	KEGG: son:SO4367 acyltransferase family protein
YP_929251.1	KEGG: son:SO4368 acyl carrier protein, putative
YP_929252.1	carries the fatty acid chain in fatty acid biosynthesis
YP_929253.1	KEGG: son:SO4370 hypothetical protein
YP_929254.1	KEGG: son:SO4371 hypothetical protein
YP_929255.1	KEGG: son:SO4372 thioester dehydrase family protein
YP_929256.1	KEGG: son:SO4373 glycosyl transferase, group 2 family protein
YP_929257.1	KEGG: son:SO4374 histidine ammonia-lyase, putative
YP_929258.1	KEGG: son:SO4375 hypothetical 4-hydroxybenzoyl-CoA thioesterase
YP_929259.1	KEGG: son:SO4376 hypothetical protein
YP_929260.1	KEGG: son:SO4377 hypothetical protein
YP_929261.1	KEGG: son:SO4378 FAD-binding protein
YP_929262.1	KEGG: son:SO4379 hypothetical protein
YP_929263.1	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_929264.1	KEGG: son:SO4381 thioester dehydrase family protein
YP_929265.1	Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis
YP_929266.1	FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP
YP_929267.1	KEGG: son:SO4384 hypothetical protein
YP_929268.1	KEGG: eba:ebA192 hypothetical protein
YP_929269.1	KEGG: son:SO4394 phage shock protein E
YP_929270.1	KEGG: sdn:Sden_3478 (acyl-carrier protein) phosphodiesterase
YP_929272.1	KEGG: mag:amb2240 TPR repeat; typically periplasmic; contain C-terminal PDZ domain
YP_929273.1	KEGG: son:SO4397 hypothetical acetyltransferase
YP_929274.1	hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine
YP_929275.1	KEGG: son:SO4400 proline iminopeptidase, putative
YP_929276.1	RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease
YP_929277.1	KEGG: son:SO4402 hypothetical protein
YP_929278.1	KEGG: son:SO4403 hypothetical protein
YP_929279.1	KEGG: hch:HCH_00813 hypothetical protein
YP_929280.1	KEGG: vch:VCA0960 GGDEF family protein
YP_929281.1	KEGG: bbr:BB3605 putative iron uptake protein
YP_929282.1	KEGG: son:SO3407 hypothetical protein
YP_929284.1	KEGG: ana:alr2175 ferrichrome iron receptor
YP_929285.1	KEGG: cps:CPS_2723 putative iron-regulated membrane protein
YP_929286.1	KEGG: vch:VCA0813 aminopeptidase
YP_929287.1	KEGG: son:SO4408 virulence regulator BipA
YP_929288.1	forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme
YP_929289.1	KEGG: son:SO4413 hypothetical kynureninase
YP_929290.1	KEGG: son:SO4414 hypothetical protein
YP_929291.1	KEGG: pha:PSHAa0053 transcriptional regulator
YP_929292.1	KEGG: hch:HCH_00993 hypothetical protein
YP_929293.1	KEGG: cjk:jk1275 peptidase E
YP_929294.1	KEGG: son:SO4465 hypothetical protein
YP_929295.1	KEGG: pha:PSHAa0989 transporter
YP_929296.1	KEGG: son:SO4467 hypothetical protein
YP_929297.1	KEGG: son:SO4470 hypothetical protein
YP_929298.1	KEGG: son:SO4471 nitrogen regulation protein
YP_929299.1	KEGG: son:SO4472 nitrogen regulation protein NR(I)
YP_929300.1	KEGG: son:SO4473 outer membrane protein, putative
YP_929301.1	KEGG: son:SO4473 outer membrane protein, putative
YP_929302.1	KEGG: son:SO4475 cation efflux family protein
YP_929303.1	KEGG: son:SO4476 spheroplast protein y precursor, putative
YP_929304.1	KEGG: sdn:Sden_3461 response regulator receiver
YP_929305.1	KEGG: son:SO4478 sensor protein CpxA
YP_929306.1	KEGG: son:SO4479 sigma-54 dependent transcriptional regulator
YP_929307.1	KEGG: son:SO4480 aldehyde dehydrogenase
YP_929308.1	KEGG: son:SO3051 hypothetical xanthine dehydrogenase accessory factor
YP_929309.1	KEGG: sdn:Sden_2225 hypothetical protein
YP_929310.1	KEGG: son:SO3049 isoquinoline 1-oxidoreductase, alpha subunit, putative
YP_929311.1	KEGG: son:SO3048 isoquinoline 1-oxidoreductase, beta subunit, putative
YP_929312.1	KEGG: sdn:Sden_3484 RNA methyltransferase TrmH, group 2
YP_929313.1	KEGG: she:Shewmr4_3739 hypothetical protein
YP_929314.1	KEGG: dar:Daro_0041 hypothetical protein
YP_929315.1	KEGG: sdn:Sden_3485 peptidase M16-like protein
YP_929316.1	KEGG: son:SO4537.2 hypothetical Zn-dependent peptidase
YP_929317.1	KEGG: son:SO4550 methyltransferase domain protein
YP_929318.1	KEGG: son:SO4551 hypothetical protein
YP_929319.1	KEGG: son:SO4554 hypothetical protein
YP_929320.1	KEGG: son:SO4555 drug resistance transporter, Bcr/CflA family protein
YP_929321.1	KEGG: sdn:Sden_3495 regulatory protein, LysR
YP_929322.1	KEGG: son:SO4558 hypothetical protein
YP_929323.1	KEGG: son:SO4559 hypothetical protein
YP_929324.1	KEGG: son:SO4560 hypothetical protein
YP_929325.1	KEGG: son:SO4561 hypothetical protein
YP_929326.1	KEGG: son:SO4562 hypothetical protein
YP_929327.1	KEGG: son:SO4563 hypothetical protein
YP_929328.1	KEGG: cps:CPS_0687 hypothetical protein
YP_929329.1	KEGG: son:SO4564 TonB2 protein, putative
YP_929330.1	uncharacterized member of the APC superfamily of amino acid transporters; unknown function
YP_929331.1	KEGG: son:SO4567 transcriptional regulator, AsnC family
YP_929332.1	SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis
YP_929333.1	KEGG: son:SO4574 hydrolase, alpha/beta fold family
YP_929334.1	catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate
YP_929335.1	KEGG: son:SO4576 O-succinylbenzoic acid--CoA ligase
YP_929336.1	KEGG: vch:VCA0275 IS1004 transposase
YP_929337.1	binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters
YP_929338.1	KEGG: son:SO4584 cell division ABC transporter, permease protein FtsX
YP_929339.1	KEGG: son:SO4585 cell division ABC transporter, ATP-binding protein FtsE
YP_929340.1	KEGG: son:SO4586 cell division protein FtsY
YP_929341.1	KEGG: sdn:Sden_3506 conserved hypothetical protein 95
YP_929342.1	KEGG: son:SO4588 hypothetical protein
YP_929343.1	KEGG: son:SO4591 tetraheme cytochrome c
YP_929344.1	KEGG: son:SO4594 hypothetical protein
YP_929345.1	KEGG: son:SOA0155 hypothetical protein
YP_929346.1	KEGG: son:SO4597 heavy metal efflux system protein, putative
YP_929347.1	KEGG: son:SOA0153 heavy metal efflux pump, CzcA family
YP_929348.1	KEGG: son:SO4599 ribonuclease, T2 family
YP_929349.1	KEGG: sdn:Sden_3512 glyoxalase/bleomycin resistance protein/dioxygenase
YP_929350.1	KEGG: cvi:CV2936 probable bacterial hemoglobin
YP_929351.1	KEGG: sdn:Sden_3513 aromatic amino acid transport protein
YP_929352.1	PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA
YP_929353.1	Represses a number of genes involved in the response to DNA damage
YP_929354.1	KEGG: son:SO4604 hypothetical protein
YP_929355.1	KEGG: son:SO4606 cytochrome c oxidase, subunit II
YP_929356.1	KEGG: son:SO4607 cytochrome c oxidase, subunit I
YP_929357.1	involved in the insertion of copper into subunit I of cytochrome C oxidase
YP_929358.1	KEGG: son:SO4609 cytochrome c oxidase subunit III
YP_929359.1	KEGG: vvy:VVA1111 hypothetical protein
YP_929360.1	KEGG: sdn:Sden_3521 hypothetical protein
YP_929361.1	KEGG: son:SO4612 hypothetical protein
YP_929362.1	KEGG: sdn:Sden_3523 cytochrome oxidase assembly
YP_929363.1	converts protoheme IX and farnesyl diphosphate to heme O
YP_929364.1	KEGG: sdn:Sden_3525 electron transport protein SCO1/SenC
YP_929366.1	KEGG: hch:HCH_00454 FOG: CheY-like receiver
YP_929367.1	KEGG: hch:HCH_00455 chemotaxis protein histidine kinase and related kinase
YP_929368.1	KEGG: sde:Sde_3106 biotin synthase
YP_929369.1	KEGG: cvi:CV3438 probable methyl-accepting chemotaxis protein
YP_929370.1	KEGG: sde:Sde_3104 biotin biosynthesis protein BioC
YP_929371.1	KEGG: xom:XOO_2714 glutamate methylesterase
YP_929372.1	KEGG: son:SO4616 polysaccharide deacetylase family protein
YP_929373.1	KEGG: son:SO4617 DNA-damage-inducible protein F
YP_929374.1	cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source
YP_929375.1	KEGG: pat:Patl_4232 peptidase M14, carboxypeptidase A
YP_929376.1	KEGG: son:SO4625 competence protein ComF
YP_929377.1	KEGG: son:SO4626 bioH protein
YP_929378.1	KEGG: son:SO4627 hypothetical protein
YP_929379.1	KEGG: son:SO4628 sulfatase
YP_929380.1	KEGG: son:SO4629 hypothetical protein
YP_929381.1	KEGG: son:SO4631 transcription elongation factor GreB
YP_929382.1	part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation
YP_929383.1	membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR
YP_929384.1	KEGG: son:SO4635 methyl-accepting chemotaxis protein
YP_929385.1	KEGG: son:SO4640 antioxidant, AhpC/Tsa family
YP_929387.1	KEGG: son:SO3697 steroid delta-isomerase domain protein
YP_929388.1	KEGG: hch:HCH_03985 histone acetyltransferase HPA2/related acetyltransferase
YP_929389.1	KEGG: bpm:BURPS1710b_2160 ribosomal-protein-serine acetyltransferase
YP_929390.1	KEGG: son:SO4458 carbohydrate kinase, PfkB family
YP_929391.1	KEGG: rba:RB2931 conserved hypothetical protein-putative acetyltransferase
YP_929392.1	KEGG: son:SO4456 hypothetical protein
YP_929394.1	KEGG: son:SO4454 methyl-accepting chemotaxis protein
YP_929395.1	KEGG: son:SO4453 electron transfer flavoprotein-ubiquinone oxidoreductase, putative
YP_929396.1	together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z
YP_929397.1	KEGG: pat:Patl_2158 molybdenum cofactor biosynthesis protein B
YP_929398.1	MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis
YP_929399.1	KEGG: son:SO4450 molybdenum cofactor biosynthesis protein D
YP_929400.1	KEGG: son:SO4449 molybdenum cofactor biosynthesis protein E
YP_929401.1	KEGG: son:SO4448 molybdenum ABC transporter, periplasmic molybdenum-binding protein
YP_929402.1	KEGG: son:SO4447 molybdenum ABC transporter, permease protein
YP_929403.1	KEGG: son:SO4446 molybdenum ABC transporter, ATP-binding protein
YP_929404.1	KEGG: pae:PA0320 hypothetical protein
YP_929405.1	KEGG: son:SO4429 hypothetical protein
YP_929406.1	KEGG: son:SO4428 DNA-binding response regulator
YP_929407.1	KEGG: son:SO4427 sensor histidine kinase
YP_929408.1	KEGG: sdn:Sden_0111 pseudouridine synthase RluA-like protein
YP_929409.1	KEGG: son:SO4425 GGDEF family protein
YP_929410.1	KEGG: son:SO4423 hypothetical protein
YP_929411.1	KEGG: cps:CPS_2971 substrate-binding transcriptional regulator, LysR family
YP_929412.1	KEGG: pha:PSHAa0079 hydrolase
YP_929413.1	KEGG: csa:Csal_1778 pirin-like protein
YP_929414.1	KEGG: bja:blr0519 hypothetical protein
YP_929415.1	catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense
YP_929416.1	KEGG: son:SO4701 hypothetical protein
YP_929417.1	KEGG: son:SO4700 hypothetical protein
YP_929418.1	KEGG: son:SO4699 oligopeptidase A
YP_929419.1	KEGG: son:SO4698 hypothetical protein
YP_929420.1	KEGG: son:SO4697 glutathione S-transferase
YP_929421.1	KEGG: rsp:RSP_0927 transcriptional regulator, LyrR family
YP_929422.1	KEGG: hch:HCH_01282 predicted nucleoside-diphosphate-sugar epimerase
YP_929423.1	KEGG: son:SO4696 hypothetical 3-methyladenine DNA glycosylase
YP_929424.1	KEGG: son:SO4694 hypothetical protein
YP_929425.1	KEGG: son:SO4693 multidrug resistance protein, AcrA/AcrE family
YP_929426.1	KEGG: son:SO4692 AcrB/AcrD/AcrF family protein
YP_929428.1	KEGG: son:SO4661 hypothetical protein
YP_929429.1	KEGG: eca:ECA0873 hypothetical protein
YP_929430.1	KEGG: sdn:Sden_3093 peptidase S8 and S53, subtilisin, kexin, sedolisin
YP_929431.1	KEGG: ppr:PBPRA0142 putative efflux pump component MtrF
YP_929432.1	KEGG: son:SO4662 lemA protein
YP_929433.1	KEGG: son:SO4661 hypothetical protein
YP_929434.1	KEGG: son:SO4660 transglycosylase SLT domain protein
YP_929435.1	KEGG: son:SO4659 hypothetical protein
YP_929436.1	KEGG: sdn:Sden_3610 protein of unknown function DUF548
YP_929437.1	KEGG: vvu:VV20326 permease of the drug/metabolite transporter (DMT) superfamily
YP_929438.1	KEGG: vpa:VP1763 transcriptional regulator, MarR family
YP_929439.1	KEGG: cps:CPS_0172 hypothetical protein
YP_929440.1	KEGG: son:SO0736 conserved hypothetical protein
YP_929441.1	KEGG: sdn:Sden_0824 protein of unknown function DUF181
YP_929442.1	KEGG: sdn:Sden_0073 thioesterase superfamily
YP_929443.1	KEGG: son:SO0075 AMP-binding family protein
YP_929444.1	KEGG: son:SO0074 hypothetical protein
YP_929445.1	KEGG: son:SO0073 ABC transporter, ATP-binding protein
YP_929446.1	KEGG: son:SO0072 transcriptional regulator, GntR family
YP_929447.1	KEGG: son:SO0071 hydrolase, alpha/beta hydrolase fold family
YP_929448.1	KEGG: son:SO0070 ATP-binding transport protein NatA
YP_929449.1	KEGG: son:SO0069 transport protein, putative
YP_929452.1	KEGG: hch:HCH_00041 molecular chaperone (small heat shock protein)
YP_929453.1	KEGG: son:SO0928 GGDEF domain protein protein
YP_929454.1	KEGG: pat:Patl_2820 hypothetical protein
YP_929455.1	KEGG: shm:Shewmr7_0578 thioredoxin domain
YP_929457.1	KEGG: sdn:Sden_2842 hypothetical protein
YP_929458.1	KEGG: hch:HCH_01941 predicted membrane protein
YP_929459.1	KEGG: son:SO1707 ABC transporter, permease protein, putative
YP_929460.1	KEGG: ppr:PBPRA2312 putative ABC-type multidrug transport system, ATPase component
YP_929461.1	KEGG: son:SO1705 putative HlyD family secretion protein
YP_929462.1	KEGG: vvy:VVA0159 transcriptional regulator
YP_929464.1	KEGG: son:SO3975 hypothetical protein
YP_929465.1	KEGG: bur:Bcep18194_B1553 transcriptional regulator, AraC family
YP_929466.1	KEGG: hch:HCH_03702 response regulator containing a CheY-like receiver domain and an HD-GYP domain
YP_929467.1	KEGG: dde:Dde_1943 histidine kinase
YP_929468.1	KEGG: sde:Sde_1689 pseudouridine synthase, Rsu
YP_929469.1	KEGG: vpa:VP1790 hypothetical protein
YP_929470.1	KEGG: vvy:VV1004 methyl-accepting chemotaxis protein
YP_929471.1	KEGG: pat:Patl_3840 abortive infection protein
YP_929472.1	KEGG: pca:Pcar_2937 signal transduction protein containing a membrane domain an EAL and a GGDEF domain-like
YP_929473.1	KEGG: sdn:Sden_2490 pentapeptide repeat
YP_929475.1	KEGG: bba:Bd3766 hypothetical protein
YP_929476.1	catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III
YP_929477.1	KEGG: rru:Rru_A0785 transcriptional regulator, LysR family
YP_929478.1	KEGG: bcz:BCZK0297 aminotransferase, class III; probable 4-aminobutyrate aminotransferase
YP_929479.1	KEGG: son:SO4515 formate dehydrogenase, C subunit, putative
YP_929480.1	KEGG: son:SO4514 formate dehydrogenase, iron-sulfur subunit
YP_929481.1	KEGG: son:SO4513 formate dehydrogenase, alpha subunit
YP_929482.1	KEGG: son:SO4512 hypothetical protein
YP_929483.1	KEGG: son:SO4511 formate dehydrogenase, C subunit, putative
YP_929484.1	KEGG: son:SO4510 formate dehydrogenase, iron-sulfur subunit
YP_929485.1	KEGG: son:SO4509 formate dehydrogenase, alpha subunit
YP_929486.1	KEGG: son:SO4508 hypothetical protein
YP_929487.1	KEGG: son:SO4507 TorA specific chaperone, putative
YP_929488.1	KEGG: son:SO4506 iron-sulfur cluster-binding protein
YP_929489.1	KEGG: son:SO4505 hypothetical protein
YP_929490.1	KEGG: son:SO4504 hypothetical protein
YP_929491.1	KEGG: son:SO4503 formate dehydrogenase accessory protein FdhD, putative
YP_929492.1	KEGG: son:SO4502 hypothetical protein
YP_929493.1	KEGG: sdn:Sden_0097 protein of unknown function DUF890
YP_929494.1	KEGG: son:SO0132 flagellar protein FliL, putative
YP_929495.1	KEGG: son:SO0131 putative chorismate--pyruvate lyase
YP_929496.1	KEGG: son:SO0130 protease, putative
YP_929497.1	KEGG: cpr:CPR_0360 cell wall surface anchor family protein
YP_929498.1	KEGG: sdn:Sden_0092 multiple antibiotic resistance (MarC)-related proteins
YP_929499.1	KEGG: tcx:Tcr_1222 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
YP_929500.1	KEGG: sdn:Sden_0091 hypothetical protein
YP_929501.1	KEGG: son:SO0126 hypothetical protein
YP_929502.1	KEGG: son:SO0123 acyltransferase family protein
YP_929503.1	KEGG: son:SO0122 transporter, LysE family
YP_929504.1	KEGG: son:SO0121 hypothetical small-conductance mechanosensitive channel
YP_929505.1	KEGG: son:SO4737 iron-sulfur cluster-binding protein
YP_929506.1	KEGG: son:SO4738 hypothetical protein
YP_929507.1	catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA
YP_929508.1	KEGG: son:SO4740 hypothetical protein
YP_929509.1	KEGG: sco:SCO6595 secreted protein
YP_929511.1	Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source
YP_929512.1	KEGG: son:SO4742 transcriptional regulator, DeoR family
YP_929513.1	KEGG: son:SO4743 TonB-dependent receptor, putative
YP_929514.1	KEGG: son:SO4745 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase
YP_929515.1	part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane
YP_929516.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit
YP_929517.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit
YP_929518.1	produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit
YP_929519.1	Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex
YP_929520.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.
YP_929521.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0
YP_929522.1	Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0
YP_929523.1	KEGG: son:SO4754 ATP synthase protein I
YP_929524.1	KEGG: son:SO4755 ParB family protein
YP_929525.1	KEGG: son:SO4756 ParA family protein
YP_929526.1	glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA
YP_929527.1	GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs