-- dump date 20140620_063419 -- class Genbank::CDS -- table cds_note -- id note YP_001355405.1 KEGG: ret:RHE_PA00012 hypothetical protein YP_001355406.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: ret:RHE_PA00011 putative peptidase protein (caspase-1 like protein) YP_001355408.1 PFAM: Resolvase domain; KEGG: sbl:Sbal_4455 resolvase, N-terminal domain YP_001355409.1 KEGG: xac:XAC0341 hypothetical protein YP_001355410.1 KEGG: sbl:Sbal_4416 hypothetical protein YP_001355411.1 KEGG: sbl:Sbal_4415 chromosome partitioning ATPase-like protein YP_001355412.1 KEGG: son:SO0730 hypothetical protein YP_001355413.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001355414.1 KEGG: son:SO0730 hypothetical protein YP_001355415.1 KEGG: ppr:PBPRC0031 hypothetical protein YP_001355416.1 KEGG: hch:HCH_02641 hypothetical protein YP_001355417.1 Qin prophage; bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor YP_001355418.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: ent:Ent638_0435 addiction module toxin, RelE/StbE family YP_001355419.1 PFAM: transposase IS4 family protein; KEGG: sbl:Sbal_3528 transposase, IS4 family protein YP_001355420.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical transposase, IS110 family YP_001355421.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4292 transposase IS3/IS911 family protein YP_001355422.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001355423.1 PFAM: Integrase catalytic region; KEGG: pin:Ping_1815 integrase, catalytic region YP_001355425.1 PFAM: Integrase catalytic region; KEGG: shw:Sputw3181_1020 ISSod8, transposase YP_001355426.1 KEGG: sfr:Sfri_1779 hypothetical protein YP_001355427.1 PFAM: Resolvase domain; KEGG: vfi:VFB15 resolvease/recombinase YP_001355428.1 KEGG: sbl:Sbal_4405 hypothetical protein YP_001355429.1 KEGG: psb:Psyr_1930 hypothetical protein YP_001355431.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001355432.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: son:SO_A0012 umuC protein YP_001355433.1 PFAM: Endonuclease I; KEGG: pin:Ping_2580 deoxyribonuclease I YP_001355435.1 PFAM: ParB domain protein nuclease; KEGG: son:SO_A0031 partition protein, ParB family, putative YP_001355436.1 KEGG: son:SO_A0032 hypothetical protein YP_001355437.1 KEGG: son:SO_A0033 hypothetical protein YP_001355438.1 KEGG: son:SO_A0034 hypothetical protein YP_001355441.1 PFAM: Protein of unknown function DUF1778; KEGG: plu:plu0959 hypothetical protein YP_001355442.1 KEGG: plu:plu0958 hypothetical protein YP_001355443.1 KEGG: son:SO_A0036 HicB-related protein YP_001355444.1 PFAM: domain of unknown function DUF1738; KEGG: yps:pYptb0035 antirestriction protein YP_001355445.1 KEGG: aav:Aave_2697 hypothetical protein YP_001355446.1 KEGG: son:SO_A0051 hypothetical protein YP_001355447.1 TIGRFAM: Conjugative relaxase region ; Conjugative transfer relaxase protein TraI; PFAM: TrwC relaxase; KEGG: ppr:PBPRC0022 putative DNA helicase YP_001355448.1 TIGRFAM: Type IV conjugative transfer system coupling protein TraD; KEGG: ppr:PBPRC0019 putative conjugative transfer protein YP_001355450.1 PFAM: TraG domain protein; KEGG: ppr:PBPRC0016 putative sex pilus assembly and mating pair YP_001355451.1 PFAM: TraH family protein; KEGG: vvu:VV2_0648 hypothetical protein YP_001355452.1 TIGRFAM: Type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB; KEGG: ppr:PBPRC0015 putative thiol-disulfide isomerase YP_001355454.1 TIGRFAM: Type-F conjugative transfer system pilin assembly protein TraF; KEGG: ppr:PBPRC0014 hypothetical sex pilus assembly and synthesis protein YP_001355455.1 TraN; TrhN; involved in stabilizing mating pairs during plasmid conjugation; F plasmid TraN appears to recognize OmpA in the recipient cell YP_001355456.1 TIGRFAM: Type-F conjugative transfer system pilin assembly protein TrbC; KEGG: ppr:PBPRC0012 conjugative transfer protein TrbC YP_001355457.1 PFAM: TraU family protein; KEGG: ppr:PBPRC0011 putative sex pilus assembly and synthesis protein YP_001355458.1 TIGRFAM: Type-F conjugative transfer system protein TraW; KEGG: ppr:PBPRC0010 hypothetical sex pilus assembly and synthesis protein YP_001355459.1 KEGG: stm:PSLT089 pilus assembly protein YP_001355460.1 TIGRFAM: Type-IV secretion system protein TraC; KEGG: ppr:PBPRC0008 putative sex pilus assembly and synthesis protein YP_001355461.1 TIGRFAM: Type IV conjugative transfer system protein TraV; KEGG: ppr:PBPRC0007 hypothetical protein YP_001355462.1 PFAM: TraB pilus assembly family protein; KEGG: ppr:PBPRC0006 putative sex pilus assembly and synthesis protein YP_001355463.1 TIGRFAM: Type-F conjugative transfer system secretin TraK; KEGG: ppr:PBPRC0005 hypothetical protein YP_001355464.1 PFAM: TraE family protein; KEGG: vvy:VVP06 putative conjugative transfer protein TraE YP_001355465.1 TIGRFAM: Type IV conjugative transfer system protein TraL; PFAM: TraL family protein; KEGG: vvy:VVP05 putative conjugative transfer protein TraL YP_001355466.1 KEGG: ppr:PBPRC0003 hypothetical protein YP_001355467.1 KEGG: son:SO_A0058 hypothetical protein YP_001355468.1 KEGG: son:SO_A0094 hypothetical protein YP_001355469.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: son:SO_A0095 plasmid partition protein ParA YP_001355470.1 PFAM: ParB family protein; KEGG: son:SO_A0096 plasmid partition protein ParB YP_001355471.1 PFAM: FRG domain protein; KEGG: sas:SAS0037 hypothetical protein YP_001355472.1 PFAM: N-6 DNA methylase; KEGG: dde:Dde_2868 type I restriction-modification system DNA methylase YP_001355473.1 PFAM: restriction modification system DNA specificity domain; KEGG: psa:PST_0251 type I restriction-modification system, S subunit YP_001355474.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: dde:Dde_2870 DEAD/DEAH box helicase-like YP_001355475.1 PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: dde:Dde_2871 transposase YP_001364237.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001364238.1 TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; KEGG: sbl:Sbal_0002 DNA polymerase III, beta subunit YP_001364239.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA YP_001364240.1 KEGG: sbl:Sbal_0004 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_001364241.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_0005 glutathione S-transferase, N-terminal domain YP_001364242.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: sbl:Sbal_0010 UreA amidolyase related protein YP_001364243.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sbl:Sbal_0011 putative signal transduction protein YP_001364244.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001364245.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001364246.1 TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; KEGG: sbl:Sbal_0014 DNA-3-methyladenine glycosylase I YP_001364247.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller; KEGG: shw:Sputw3181_0009 amidohydrolase YP_001364248.1 KEGG: sbl:Sbal_0017 hypothetical protein YP_001364249.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs YP_001364250.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shn:Shewana3_0022 diguanylate cyclase YP_001364251.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids YP_001364252.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids YP_001364253.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters YP_001364254.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: shm:Shewmr7_0018 protein of unknown function UPF0029 YP_001364255.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: sbl:Sbal_0024 potassium uptake protein, TrkH family YP_001364256.1 KEGG: sbl:Sbal_0025 protoporphyrinogen oxidase YP_001364257.1 PFAM: regulatory protein ArsR; KEGG: sbl:Sbal_0026 regulatory protein, ArsR YP_001364258.1 KEGG: sbl:Sbal_0027 protoporphyrinogen oxidase YP_001364259.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: sbl:Sbal_0028 potassium uptake protein, TrkH family YP_001364260.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain YP_001364261.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sbl:Sbal_0030 sun protein YP_001364262.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: sbl:Sbal_0031 methionyl-tRNA formyltransferase YP_001364263.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001364264.1 PFAM: Peptidoglycan-binding LysM; KEGG: sbl:Sbal_0033 peptidoglycan-binding LysM YP_001364265.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: sbl:Sbal_0034 DNA protecting protein DprA YP_001364266.1 PFAM: protein of unknown function DUF494; KEGG: shw:Sputw3181_0027 protein of unknown function DUF494 YP_001364267.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: sbl:Sbal_0036 DNA topoisomerase, type IA, zn finger domain protein YP_001364268.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: sbl:Sbal_0037 SUA5/YciO/YrdC/YwlC family protein YP_001364269.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001364270.1 PFAM: globin; KEGG: sbl:Sbal_0039 globin YP_001364271.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_001364272.1 PFAM: protein of unknown function DUF1488; KEGG: sbl:Sbal_0041 protein of unknown function DUF1488 YP_001364273.1 KEGG: sbl:Sbal_0042 carbonic anhydrase, family 3 YP_001364274.1 PFAM: protein of unknown function UPF0153; KEGG: sbl:Sbal_4337 protein of unknown function UPF0153 YP_001364275.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sbl:Sbal_4336 transcriptional regulator, BadM/Rrf2 family YP_001364276.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: sbl:Sbal_4335 protein of unknown function DUF610, YibQ YP_001364277.1 TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: sbl:Sbal_4334 carboxyl-terminal protease YP_001364278.1 PFAM: peptidase M23B; KEGG: sbl:Sbal_4333 peptidase M23B YP_001364279.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_001364280.1 PFAM: Rhodanese domain protein; KEGG: sbl:Sbal_4331 rhodanese domain protein YP_001364281.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA YP_001364282.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001364283.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sbl:Sbal_4328 HI0933 family protein YP_001364284.1 PFAM: AAA-4 family protein; KEGG: neu:NE0383 hypothetical protein YP_001364285.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: she:Shewmr4_0051 potassium uptake protein, TrkH family YP_001364286.1 PFAM: TrkA-N domain protein; KEGG: son:SO0058 potassium uptake protein, putative YP_001364287.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shn:Shewana3_0059 two component transcriptional regulator, winged helix family YP_001364288.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_4302 integral membrane sensor signal transduction histidine kinase YP_001364289.1 PFAM: Pirin domain protein; KEGG: sbl:Sbal_4301 pirin domain protein domain protein YP_001364290.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: sbl:Sbal_4300 signal transduction histidine kinase, LytS YP_001364291.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: sbl:Sbal_4299 response regulator receiver protein YP_001364292.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_4298 major facilitator superfamily MFS_1 YP_001364293.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_4297 protein of unknown function DUF81 YP_001364294.1 PFAM: NLP/P60 protein; KEGG: sbl:Sbal_4296 NLP/P60 protein YP_001364295.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_4295 major facilitator superfamily MFS_1 YP_001364296.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sbl:Sbal_4294 periplasmic binding protein/LacI transcriptional regulator YP_001364297.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sbl:Sbal_4288 sucrose phosphorylase YP_001364298.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_4287 major facilitator superfamily MFS_1 YP_001364299.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_4286 TonB-dependent receptor YP_001364300.1 PFAM: PfkB domain protein; KEGG: sbl:Sbal_4285 PfkB domain protein YP_001364301.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis YP_001364302.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: sbl:Sbal_4283 alpha-2-macroglobulin domain protein YP_001364303.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: sbl:Sbal_4282 penicillin-binding protein 1C YP_001364304.1 KEGG: sbl:Sbal_4281 hypothetical protein YP_001364305.1 KEGG: sbl:Sbal_4280 transport protein, putative YP_001364306.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_4279 ABC transporter related YP_001364307.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: sbl:Sbal_4278 TAP domain protein YP_001364308.1 PFAM: regulatory protein GntR HTH; KEGG: sbl:Sbal_4277 regulatory protein GntR, HTH YP_001364309.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_4276 ABC transporter related YP_001364310.1 KEGG: sbl:Sbal_4275 hypothetical protein YP_001364311.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sbl:Sbal_4274 AMP-dependent synthetase and ligase YP_001364312.1 KEGG: sbl:Sbal_4273 MORN variant repeat protein YP_001364313.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_4272 thioesterase superfamily protein YP_001364314.1 PFAM: HPP family protein?; KEGG: sbl:Sbal_4271 HPP family protein+B94 YP_001364315.1 KEGG: shw:Sputw3181_4012 hypothetical protein YP_001364316.1 PFAM: thioesterase superfamily protein; KEGG: shw:Sputw3181_4011 thioesterase superfamily protein YP_001364317.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sbl:Sbal_4268 glutathione-dependent formaldehyde-activating, GFA YP_001364318.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sbl:Sbal_4267 putative transcriptional regulator, MerR family YP_001364319.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sbl:Sbal_4266 carboxymuconolactone decarboxylase YP_001364320.1 KEGG: sbl:Sbal_4265 hypothetical protein YP_001364321.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_4264 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001364322.1 KEGG: sfr:Sfri_3965 hypothetical protein YP_001364323.1 KEGG: sbl:Sbal_4263 hypothetical protein YP_001364324.1 KEGG: sbl:Sbal_4262 hypothetical protein YP_001364325.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbl:Sbal_4260 glycerophosphoryl diester phosphodiesterase YP_001364326.1 PFAM: Negative transcriptional regulator; KEGG: sbl:Sbal_4259 FMN-binding negative transcriptional regulator YP_001364327.1 PFAM: protein of unknown function DUF347; KEGG: bvi:Bcep1808_7223 protein of unknown function DUF347 YP_001364328.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_4256 transcriptional regulator, MarR family YP_001364329.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: sbl:Sbal_4255 siderophore-interacting protein YP_001364330.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_001364331.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sbl:Sbal_4253 histidine utilization repressor YP_001364332.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_001364333.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_001364334.1 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: shm:Shewmr7_0096 twin-arginine translocation pathway signal; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: she:Shewmr4_0102 formate dehydrogenase, alpha subunit YP_001364335.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: shn:Shewana3_0103 formate dehydrogenase, beta subunit YP_001364336.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: shn:Shewana3_0104 formate dehydrogenase, gamma subunit YP_001364337.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: shn:Shewana3_0105 formate dehydrogenase accessory protein FdhE YP_001364338.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis YP_001364339.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: shn:Shewana3_0107 selenocysteine-specific translation elongation factor YP_001364340.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth YP_001364341.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: she:Shewmr4_0109 protein of unknown function DUF395, YeeE/YedE YP_001364342.1 PFAM: SirA family protein; KEGG: shn:Shewana3_0110 SirA family protein YP_001364343.1 PFAM: peptidase M48 Ste24p; KEGG: sbl:Sbal_4244 peptidase M48, Ste24p YP_001364344.1 KEGG: sbl:Sbal_4243 hypothetical protein YP_001364345.1 KEGG: spc:Sputcn32_0108 hypothetical protein YP_001364346.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: spc:Sputcn32_0109 glyoxalase/bleomycin resistance protein/dioxygenase YP_001364347.1 KEGG: shm:Shewmr7_0109 hypothetical protein YP_001364348.1 KEGG: sbl:Sbal_4240 hypothetical protein YP_001364349.1 PFAM: protein of unknown function DUF1090; KEGG: sbl:Sbal_4239 protein of unknown function DUF1090 YP_001364350.1 KEGG: sbl:Sbal_4238 hypothetical protein YP_001364351.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sbl:Sbal_4237 MscS mechanosensitive ion channel YP_001364352.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_4236 lysine exporter protein (LysE/YggA) YP_001364353.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_4235 phospholipid/glycerol acyltransferase YP_001364354.1 KEGG: sbl:Sbal_4234 hypothetical protein YP_001364355.1 PFAM: protein of unknown function DUF833; KEGG: sbl:Sbal_4233 protein of unknown function DUF833 YP_001364356.1 KEGG: sbl:Sbal_4232 hypothetical protein YP_001364357.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sbl:Sbal_4231 multiple antibiotic resistance (MarC)-related protein YP_001364358.1 PFAM: PKD domain containing protein; peptidase M6 immune inhibitor A; KEGG: sbl:Sbal_4230 peptidase M6, immune inhibitor A YP_001364359.1 PFAM: Chorismate lyase; KEGG: sbl:Sbal_4229 chorismate lyase YP_001364360.1 PFAM: flagellar basal body-associated protein FliL; KEGG: sbl:Sbal_4228 flagellar basal body-associated protein FliL YP_001364361.1 PFAM: protein of unknown function DUF890; KEGG: sbl:Sbal_4227 protein of unknown function DUF890 YP_001364362.1 PFAM: protein of unknown function DUF333; KEGG: sbl:Sbal_4226 protein of unknown function DUF333 YP_001364363.1 KEGG: sbl:Sbal_4225 response regulator receiver protein YP_001364364.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase YP_001364365.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sbl:Sbal_4223 molybdenum cofactor synthesis domain YP_001364366.1 PFAM: Ferritin Dps family protein; KEGG: sbl:Sbal_4222 ferritin, Dps family protein YP_001364367.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: shn:Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) YP_001364368.1 DHBP synthase; functions during riboflavin biosynthesis YP_001364369.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sbl:Sbal_4218 oligopeptidase B YP_001364370.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: sbl:Sbal_4217 excinuclease ABC, C subunit domain protein YP_001364371.1 KEGG: she:Shewmr4_2119 hypothetical protein YP_001364372.1 KEGG: dar:Daro_3431 hypothetical protein YP_001364373.1 PFAM: glycosyl transferase family 51; KEGG: shw:Sputw3181_3934 glycosyl transferase, family 51 YP_001364374.1 KEGG: sbl:Sbal_4215 lipoprotein, putative YP_001364375.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_4214 methyltransferase type 12 YP_001364376.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: sbl:Sbal_4213 peptidase M14, carboxypeptidase A YP_001364377.1 KEGG: sbl:Sbal_4212 hypothetical protein YP_001364378.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbl:Sbal_4211 sodium:dicarboxylate symporter YP_001364379.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_001364380.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_001364381.1 PFAM: RNA-binding S4 domain protein; KEGG: sbl:Sbal_4208 RNA-binding S4 domain protein YP_001364382.1 TIGRFAM: general secretion pathway protein C; KEGG: sbl:Sbal_4207 general secretion pathway protein C YP_001364383.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D YP_001364384.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: sbl:Sbal_4205 general secretory pathway protein E YP_001364385.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: sbl:Sbal_4204 general secretion pathway protein F YP_001364386.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: sbl:Sbal_4203 general secretion pathway protein G YP_001364387.1 TIGRFAM: general secretion pathway protein H; KEGG: sbl:Sbal_4202 general secretion pathway protein H YP_001364388.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: sbl:Sbal_4201 general secretion pathway protein I YP_001364389.1 TIGRFAM: general secretion pathway protein J; KEGG: sbl:Sbal_4200 general secretion pathway protein J YP_001364390.1 PFAM: General secretion pathway protein K; KEGG: sbl:Sbal_4199 general secretion pathway protein K YP_001364391.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: sbl:Sbal_4198 general secretion pathway protein L YP_001364392.1 PFAM: General secretion pathway M protein; KEGG: sbl:Sbal_4197 general secretion pathway M protein YP_001364393.1 PFAM: type II secretion system protein N; KEGG: sbl:Sbal_4196 type II secretion system protein N YP_001364394.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_4195 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001364395.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; Cupin 2 conserved barrel domain protein; KEGG: sbl:Sbal_4194 aspartyl/asparaginyl beta-hydroxylase YP_001364396.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: sbl:Sbal_4193 phytanoyl-CoA dioxygenase YP_001364397.1 KEGG: sbl:Sbal_4192 hypothetical protein YP_001364398.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_4191 GCN5-related N-acetyltransferase YP_001364399.1 PFAM: phage Tail Collar domain protein; KEGG: sbl:Sbal_4190 phage tail collar domain protein YP_001364400.1 TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: OmpA domain protein transmembrane region-containing protein; Fibronectin type III domain protein; Ig family protein; SMART: PKD domain containing protein; Cadherin; LamG domain protein jellyroll fold domain protein; Dystroglycan-type cadherin domain protein; KEGG: shn:Shewana3_0168 Ig family protein YP_001364401.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose YP_001364402.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: sbl:Sbal_4187 3'(2'),5'-bisphosphate nucleotidase YP_001364403.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_3684 GCN5-related N-acetyltransferase YP_001364404.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_4185 putative transcriptional regulator, TetR family YP_001364405.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_4184 phospholipid/glycerol acyltransferase YP_001364406.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA YP_001364407.1 catalyzes the formation of selenophosphate from selenide and ATP YP_001364408.1 PFAM: fatty acid desaturase; KEGG: sbl:Sbal_4181 stearoyl-CoA 9-desaturase YP_001364409.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis YP_001364410.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs YP_001364411.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_001364412.1 PFAM: RNP-1 like RNA-binding protein; KEGG: sbl:Sbal_4176 RNP-1 like RNA-binding protein YP_001364413.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis YP_001364414.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon YP_001364415.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_001364416.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001364417.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force YP_001364418.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides Ouzounis Woese) domain protein; KEGG: sbl:Sbal_4470 NusG antitermination factor YP_001364419.1 binds directly to 23S ribosomal RNA YP_001364420.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001364421.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001364422.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001364423.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001364424.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001364425.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001364426.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001364427.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001364428.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001364429.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001364430.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001364431.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001364432.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001364433.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001364434.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001364435.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001364436.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation YP_001364437.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001364438.1 one of the stabilizing components for the large ribosomal subunit YP_001364439.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001364440.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001364441.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001364442.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001364443.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001364444.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_001364445.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001364446.1 binds 5S rRNA along with protein L5 and L25 YP_001364447.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001364448.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001364449.1 late assembly protein YP_001364450.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_001364451.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_001364452.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001364453.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001364454.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001364455.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001364456.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001364457.1 KEGG: shn:Shewana3_0226 conserved hypothetical protein YP_001364458.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane YP_001364459.1 PFAM: Heme exporter protein D (CcmD); KEGG: shn:Shewana3_0228 heme exporter protein D (CcmD) YP_001364460.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: sbl:Sbal_0226 heme exporter protein CcmC YP_001364461.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: sbl:Sbal_0227 heme exporter protein CcmB YP_001364462.1 ATP-binding protein; required for proper cytochrome c maturation YP_001364463.1 PFAM: cytochrome c class I; KEGG: sbl:Sbal_0229 cytochrome c, class I YP_001364464.1 SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_0230 tetratricopeptide domain protein YP_001364465.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: sbl:Sbal_0231 cytochrome c-type biogenesis protein CcmF YP_001364466.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbl:Sbal_0232 periplasmic protein thiol--disulphide oxidoreductase DsbE YP_001364467.1 PFAM: cytochrome C biogenesis protein; KEGG: sbl:Sbal_0233 cytochrome c biogenesis protein YP_001364468.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbl:Sbal_0234 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001364469.1 KEGG: sbl:Sbal_0235 hypothetical protein YP_001364470.1 KEGG: sbl:Sbal_0236 hypothetical protein YP_001364471.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0237 GCN5-related N-acetyltransferase YP_001364472.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sbl:Sbal_0238 integral membrane sensor signal transduction histidine kinase YP_001364473.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_0239 two component transcriptional regulator, winged helix family YP_001364474.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: sbl:Sbal_0240 propeptide, PepSY amd peptidase M4 YP_001364475.1 KEGG: sbl:Sbal_0241 diheme cytochrome c YP_001364476.1 PFAM: Domain of unknown function DUF1924; KEGG: sbl:Sbal_0242 cytochrome c, monohaem YP_001364477.1 PFAM: cytochrome B561; KEGG: sbl:Sbal_0243 cytochrome b561 YP_001364478.1 KEGG: sbl:Sbal_0244 hypothetical protein YP_001364479.1 KEGG: sbl:Sbal_0245 hypothetical protein YP_001364480.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0246 transcriptional regulator, LysR family YP_001364481.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_0247 short-chain dehydrogenase/reductase SDR YP_001364482.1 PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_0248 aldehyde dehydrogenase (NAD(+)) YP_001364483.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_0249 GAF modulated sigma54 specific transcriptional regulator, fis family YP_001364484.1 PFAM: Catalase domain protein; KEGG: vco:VC0395_A1188 catalase YP_001364485.1 PFAM: Ankyrin; KEGG: vch:VC1584 AnkB protein YP_001364486.1 TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sbl:Sbal_0250 alcohol dehydrogenase, zinc-binding domain protein YP_001364487.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0260 integral membrane sensor signal transduction histidine kinase YP_001364488.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_0261 two component transcriptional regulator, winged helix family YP_001364489.1 PFAM: protein of unknown function Spy-related; KEGG: sbl:Sbal_0262 protein of unknown function, Spy-related YP_001364490.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sbl:Sbal_0263 cation diffusion facilitator family transporter YP_001364491.1 KEGG: shw:Sputw3181_0220 hypothetical protein YP_001364492.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_0266 nitrogen metabolism transcriptional regulator, NtrC, fis family YP_001364493.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: sbl:Sbal_0267 signal transduction histidine kinase, nitrogen specific, NtrB YP_001364494.1 KEGG: sbl:Sbal_0268 hypothetical protein YP_001364495.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_0269 glutathione S-transferase, N-terminal domain YP_001364496.1 PFAM: ThiJ/PfpI domain protein; KEGG: sbl:Sbal_0270 ThiJ/PfpI domain protein YP_001364497.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sbl:Sbal_0271 iron-containing alcohol dehydrogenase YP_001364498.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_0272 transcriptional regulator, TetR family YP_001364499.1 PFAM: protein of unknown function DUF1255; KEGG: sbl:Sbal_0273 protein of unknown function DUF1255 YP_001364500.1 PFAM: chemotaxis sensory transducer; KEGG: sbl:Sbal_0274 methyl-accepting chemotaxis sensory transducer YP_001364501.1 PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_0275 protein of unknown function DUF323 YP_001364502.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: shn:Shewana3_0266 2OG-Fe(II) oxygenase YP_001364503.1 KEGG: sbl:Sbal_0276 hypothetical protein YP_001364504.1 KEGG: sbl:Sbal_0277 hypothetical protein YP_001364505.1 PFAM: PfkB domain protein; KEGG: sbl:Sbal_0278 PfkB domain protein YP_001364506.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_0279 diguanylate cyclase YP_001364507.1 PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: sbl:Sbal_0280 MOSC domain containing protein YP_001364508.1 KEGG: sbl:Sbal_0281 hypothetical protein YP_001364509.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0282 methyl-accepting chemotaxis sensory transducer YP_001364510.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: sbl:Sbal_0283 electron-transferring-flavoprotein dehydrogenase YP_001364511.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_001364512.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis YP_001364513.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: sbl:Sbal_0286 molybdopterin converting factor, subunit 1 YP_001364514.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: sbl:Sbal_0287 molybdopterin biosynthesis MoaE YP_001364515.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: sbl:Sbal_0288 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001364516.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_0289 molybdate ABC transporter, inner membrane subunit YP_001364517.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0290 ABC transporter related YP_001364518.1 KEGG: sbl:Sbal_0291 hypothetical protein YP_001364519.1 KEGG: sbl:Sbal_0292 hypothetical protein YP_001364520.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_0293 two component transcriptional regulator, winged helix family YP_001364521.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0294 integral membrane sensor signal transduction histidine kinase YP_001364522.1 TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: sbl:Sbal_0295 pseudouridine synthase Rlu family protein, TIGR01621 YP_001364523.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_0296 diguanylate cyclase YP_001364524.1 PFAM: protein of unknown function UPF0057; KEGG: sbl:Sbal_0297 protein of unknown function UPF0057 YP_001364525.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0298 TonB-dependent receptor YP_001364526.1 KEGG: sbl:Sbal_0299 hypothetical protein YP_001364527.1 PFAM: peptidase M23B; KEGG: sbl:Sbal_0300 peptidase M23B YP_001364528.1 KEGG: sbl:Sbal_0301 hypothetical protein YP_001364529.1 KEGG: shn:Shewana3_0291 Zn-dependent hydrolase of the beta-lactamase fold YP_001364530.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001364531.1 PFAM: regulatory protein TetR; KEGG: shm:Shewmr7_3727 transcriptional regulator, TetR family YP_001364532.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters YP_001364533.1 PFAM: Domain of unknown function DUF1864; KEGG: sbl:Sbal_0303 hypothetical protein YP_001364534.1 PFAM: aminotransferase class V; KEGG: sbl:Sbal_0304 aminotransferase, class V YP_001364535.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbl:Sbal_0305 sodium:dicarboxylate symporter YP_001364537.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dar:Daro_3147 ATP-binding region, ATPase-like:histidine kinase, HAMP region:histidine kinase A, N-terminal YP_001364538.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dar:Daro_3146 response regulator receiver:transcriptional regulatory protein, C-terminal YP_001364539.1 KEGG: ppr:PBPRA1749 hypothetical protein YP_001364540.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme YP_001364541.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: sbl:Sbal_0307 GTP-binding protein TypA YP_001364542.1 KEGG: sbl:Sbal_1756 hypothetical protein YP_001364543.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_0308 diguanylate cyclase YP_001364544.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_0310 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001364545.1 KEGG: sbl:Sbal_0313 hypothetical protein YP_001364546.1 KEGG: sbl:Sbal_0314 hypothetical protein YP_001364547.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease YP_001364548.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_0316 alpha/beta hydrolase fold YP_001364549.1 KEGG: sbl:Sbal_0317 hypothetical protein YP_001364550.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_001364551.1 TIGRFAM: thioesterase domain, putative; KEGG: sbl:Sbal_0319 thioesterase domain, putative YP_001364552.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds YP_001364553.1 PFAM: Rhodanese domain protein; KEGG: sbl:Sbal_0322 rhodanese domain protein YP_001364554.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sbl:Sbal_0323 transcriptional regulator, XRE family YP_001364555.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: shw:Sputw3181_0279 benzoate transporter YP_001364556.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_0280 GCN5-related N-acetyltransferase YP_001364557.1 KEGG: sbl:Sbal_0326 hypothetical protein YP_001364558.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001364559.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001364560.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sbl:Sbal_0329 thioester dehydrase family protein YP_001364561.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001364562.1 KEGG: sbl:Sbal_0331 hypothetical protein YP_001364563.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sbl:Sbal_0332 monooxygenase, FAD-binding YP_001364564.1 KEGG: sbl:Sbal_0333 hypothetical protein YP_001364565.1 KEGG: shw:Sputw3181_0292 hypothetical protein YP_001364566.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_0335 thioesterase superfamily protein YP_001364567.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: sbl:Sbal_0336 histidine ammonia-lyase YP_001364568.1 PFAM: glycosyl transferase family 2; lipid A biosynthesis acyltransferase; KEGG: sbl:Sbal_0337 glycosyl transferase, family 2 YP_001364569.1 KEGG: sbl:Sbal_0338 thioester dehydrase family protein YP_001364570.1 KEGG: sbl:Sbal_0339 aconitate hydratase YP_001364571.1 KEGG: sbl:Sbal_0340 hypothetical protein YP_001364572.1 carries the fatty acid chain in fatty acid biosynthesis YP_001364573.1 KEGG: sbl:Sbal_0342 acyl carrier protein, putative YP_001364574.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_0343 phospholipid/glycerol acyltransferase YP_001364575.1 KEGG: sbl:Sbal_0344 hypothetical protein YP_001364576.1 KEGG: sbl:Sbal_0345 hypothetical protein YP_001364577.1 catalyzes branch migration in Holliday junction intermediates YP_001364578.1 PFAM: regulatory protein LuxR; response regulator receiver; Bacterio-opsin activator HTH domain protein; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_0347 two component transcriptional regulator, LuxR family YP_001364579.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sbl:Sbal_0348 integral membrane sensor signal transduction histidine kinase YP_001364580.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sbl:Sbal_0349 tetratricopeptide TPR_2 repeat protein YP_001364581.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: sbl:Sbal_0350 Na+/Ca+ antiporter, CaCA family YP_001364582.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sbl:Sbal_0351 AMP-dependent synthetase and ligase YP_001364583.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: sbl:Sbal_0352 putative endoribonuclease L-PSP YP_001364584.1 KEGG: sbl:Sbal_0353 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001364585.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001364586.1 Essential for recycling GMP and indirectly, cGMP YP_001364587.1 KEGG: sbl:Sbal_0356 hypothetical protein YP_001364588.1 KEGG: sbl:Sbal_0357 hypothetical protein YP_001364589.1 PFAM: aminoglycoside phosphotransferase; KEGG: sbl:Sbal_0358 aminoglycoside phosphotransferase YP_001364590.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0359 major facilitator superfamily MFS_1 YP_001364591.1 KEGG: sbl:Sbal_0360 hypothetical protein YP_001364592.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: sbl:Sbal_0361 filamentation induced by cAMP protein Fic YP_001364593.1 PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: sbl:Sbal_0362 type III restriction enzyme, res subunit YP_001364594.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0363 transcriptional regulator, LysR family YP_001364595.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily YP_001364596.1 PFAM: helix-hairpin-helix motif; ERCC4 domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: sbl:Sbal_0365 ERCC4 domain protein YP_001364597.1 KEGG: sbl:Sbal_0366 hypothetical protein YP_001364598.1 PFAM: helix-turn-helix domain protein; KEGG: sdn:Sden_0306 transciptional regulator YP_001364599.1 KEGG: sdn:Sden_0307 HipA-like protein YP_001364600.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: sbl:Sbal_0369 YicC N-terminal domain protein YP_001364601.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001364602.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001364603.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer YP_001364604.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: sbl:Sbal_0373 peptidase S9, prolyl oligopeptidase active site domain protein YP_001364605.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly YP_001364606.1 catalyzes the formation of dUMP from dUTP YP_001364607.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: sbl:Sbal_0376 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001364608.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase YP_001364609.1 required for 70S ribosome assembly YP_001364610.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_001364611.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis YP_001364612.1 KEGG: sbl:Sbal_0381 hypothetical protein YP_001364613.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0382 RarD protein, DMT superfamily transporter YP_001364614.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_0383 thioesterase superfamily protein YP_001364615.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_0384 ATP-dependent DNA helicase RecQ YP_001364616.1 SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_0385 response regulator receiver protein YP_001364617.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_001364618.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis YP_001364619.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001364620.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001364621.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: sbl:Sbal_0390 membrane protein involved in aromatic hydrocarbon degradation YP_001364622.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: sbl:Sbal_0391 glycerol kinase YP_001364623.1 KEGG: sbl:Sbal_0392 hypothetical protein YP_001364624.1 MraZ; UPF0040; crystal structure shows similarity to AbrB YP_001364625.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: sbl:Sbal_0394 S-adenosyl-methyltransferase MraW YP_001364626.1 PFAM: cell division protein FtsL; KEGG: sbl:Sbal_0395 cell division protein FtsL YP_001364627.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: sbl:Sbal_0396 peptidoglycan glycosyltransferase YP_001364628.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate YP_001364629.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sbl:Sbal_0398 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001364630.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001364631.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_001364632.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: sbl:Sbal_0401 cell division protein FtsW YP_001364633.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis YP_001364634.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001364635.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: sbl:Sbal_0404 polypeptide-transport-associated domain protein, FtsQ-type YP_001364636.1 PFAM: cell division protein FtsA; KEGG: sbl:Sbal_0405 cell division protein FtsA YP_001364637.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function YP_001364638.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001364639.1 KEGG: sbl:Sbal_0408 hypothetical protein YP_001364640.1 PFAM: peptidase M23B; KEGG: sbl:Sbal_0409 peptidase M23B YP_001364641.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_001364642.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001364643.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: sbl:Sbal_3903 diguanylate cyclase YP_001364644.1 PFAM: TatD-related deoxyribonuclease; KEGG: sbl:Sbal_3902 TatD-related deoxyribonuclease YP_001364645.1 KEGG: sbl:Sbal_3901 hypothetical protein YP_001364646.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: sbl:Sbal_3900 sec-independent protein translocase, TatC subunit YP_001364647.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: sbl:Sbal_3899 twin-arginine translocation protein, TatB subunit YP_001364648.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: sbl:Sbal_3898 twin-arginine translocation protein, TatA/E family subunit YP_001364649.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: sbl:Sbal_3897 2-polyprenylphenol 6-hydroxylase YP_001364650.1 PFAM: protein of unknown function DUF1243; KEGG: sbl:Sbal_3896 protein of unknown function DUF1243 YP_001364651.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_3895 ubiquinone/menaquinone biosynthesis methyltransferase YP_001364652.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sbl:Sbal_3894 arginase/agmatinase/formiminoglutamase YP_001364653.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_001364654.1 KEGG: sbl:Sbal_3892 uroporphyrinogen decarboxylase YP_001364655.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sbl:Sbal_3891 phosphoesterase, PA-phosphatase related YP_001364656.1 KEGG: sbl:Sbal_3890 hypothetical protein YP_001364657.1 KEGG: sbl:Sbal_3889 hypothetical protein YP_001364658.1 PFAM: SNARE associated Golgi protein; KEGG: sbl:Sbal_3887 DedA family protein YP_001364659.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_001364660.1 PFAM: conserved hypothetical protein 22; KEGG: sbl:Sbal_3885 conserved hypothetical protein 22 YP_001364661.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_3884 TonB-dependent receptor YP_001364662.1 KEGG: sbl:Sbal_3883 hypothetical protein YP_001364663.1 KEGG: sbl:Sbal_3882 ATP-dependent protease La (LON) domain protein, putative YP_001364664.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_3881 pseudouridine synthase YP_001364665.1 KEGG: sbl:Sbal_3880 hypothetical protein YP_001364666.1 KEGG: sbl:Sbal_3879 hypothetical protein YP_001364667.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sbl:Sbal_3878 dTDP-4-dehydrorhamnose reductase YP_001364668.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sbl:Sbal_3877 integral membrane sensor signal transduction histidine kinase YP_001364669.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: sbl:Sbal_3876 two component transcriptional regulator, fis family YP_001364670.1 PFAM: PKD domain containing protein; peptidase M4 thermolysin; Propeptide PepSY amd peptidase M4; peptidase domain protein; Peptidase M4 thermolysin; KEGG: sbl:Sbal_3874 peptidase M4, thermolysin YP_001364671.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_3873 short-chain dehydrogenase/reductase SDR YP_001364672.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: sbl:Sbal_3872 deoxyribodipyrimidine photolyase-related protein YP_001364673.1 KEGG: hch:HCH_03046 hypothetical protein YP_001364674.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001364675.1 KEGG: sbl:Sbal_3631 hypothetical protein YP_001364676.1 PFAM: protein of unknown function DUF971; KEGG: sbl:Sbal_3869 protein of unknown function DUF971 YP_001364677.1 heat shock protein involved in degradation of misfolded proteins YP_001364678.1 heat shock protein involved in degradation of misfolded proteins YP_001364679.1 KEGG: sbl:Sbal_3866 hypothetical protein YP_001364680.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: sbl:Sbal_3865 bifunctional deaminase-reductase domain protein YP_001364681.1 KEGG: sbl:Sbal_3864 hypothetical protein YP_001364682.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_3862 response regulator receiver protein YP_001364683.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_3861 histidine kinase YP_001364684.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: son:SO4154 transcriptional regulator, LysR family YP_001364685.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: son:SO4153 N-ethylmaleimide reductase, putative YP_001364686.1 PFAM: protein of unknown function DUF1486; KEGG: shn:Shewana3_3693 protein of unknown function DUF1486 YP_001364687.1 PFAM: polysaccharide deacetylase; KEGG: shn:Shewana3_3692 polysaccharide deacetylase YP_001364688.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sbl:Sbal_3859 sulphate transporter YP_001364689.1 KEGG: shn:Shewana3_3690 cytochrome c, putative YP_001364690.1 KEGG: son:SO4143 hypothetical protein YP_001364691.1 KEGG: she:Shewmr4_3511 cytochrome c family protein YP_001364692.1 KEGG: sbl:Sbal_3858 hypothetical protein YP_001364693.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_3857 Sel1 domain protein repeat-containing protein YP_001364694.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sbl:Sbal_3856 MscS mechanosensitive ion channel YP_001364695.1 KEGG: sbl:Sbal_3855 hypothetical protein YP_001364696.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sbl:Sbal_3854 diaminopimelate decarboxylase YP_001364697.1 PFAM: protein of unknown function DUF465; KEGG: sbl:Sbal_3853 protein of unknown function DUF465 YP_001364698.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway YP_001364699.1 KEGG: sbl:Sbal_3851 hypothetical protein YP_001364700.1 PFAM: protein of unknown function DUF107; KEGG: sbl:Sbal_3850 protein of unknown function DUF107 YP_001364701.1 PFAM: band 7 protein; KEGG: sbl:Sbal_3849 band 7 protein YP_001364702.1 PFAM: band 7 protein; KEGG: sbl:Sbal_3848 band 7 protein YP_001364703.1 KEGG: sbl:Sbal_3847 hypothetical protein YP_001364704.1 PFAM: Sporulation domain protein; KEGG: sbl:Sbal_3846 sporulation domain protein YP_001364705.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_001364706.1 TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_3844 primosomal protein N' YP_001364707.1 KEGG: sbl:Sbal_3843 hypothetical protein YP_001364708.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome YP_001364709.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: sbl:Sbal_3841 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)) YP_001364710.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules YP_001364711.1 KEGG: sbl:Sbal_3839 conserved hypothetical biogenesis protein MshI YP_001364712.1 KEGG: sbl:Sbal_3838 hypothetical protein YP_001364713.1 KEGG: sbl:Sbal_3837 MSHA biogenesis protein MshJ YP_001364714.1 KEGG: sbl:Sbal_3836 MSHA biogenesis protein MshK YP_001364715.1 TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB short domain; KEGG: sbl:Sbal_3835 pilus (MSHA type) biogenesis protein MshL YP_001364716.1 KEGG: sbl:Sbal_3834 MSHA biogenesis protein MshM YP_001364717.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_3833 tetratricopeptide TPR_2 repeat protein YP_001364718.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: sbl:Sbal_3832 type II secretion system protein E YP_001364719.1 PFAM: type II secretion system protein; KEGG: sbl:Sbal_3831 type II secretion system protein YP_001364720.1 KEGG: sbl:Sbal_3830 hypothetical protein YP_001364721.1 KEGG: sbl:Sbal_3829 MSHA pilin protein MshB YP_001364722.1 KEGG: shm:Shewmr7_0473 methylation site containing protein YP_001364723.1 KEGG: sbl:Sbal_3827 methylation site containing protein YP_001364724.1 KEGG: sbl:Sbal_3826 MSHA pilin protein MshD YP_001364725.1 KEGG: sbl:Sbal_3825 MSHA biogenesis protein MshO YP_001364726.1 KEGG: sbl:Sbal_3824 MSHA biogenesis protein MshP YP_001364727.1 KEGG: sbl:Sbal_3823 hypothetical protein YP_001364728.1 functions in MreBCD complex in some organisms YP_001364729.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall YP_001364730.1 PFAM: Rod shape-determining protein MreD; KEGG: sbl:Sbal_3820 rod shape-determining protein MreD YP_001364731.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sbl:Sbal_3819 maf protein YP_001364732.1 involved in the processing of the 5'end of 16S rRNA YP_001364733.1 KEGG: sbl:Sbal_3817 hypothetical protein YP_001364734.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sbl:Sbal_3816 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001364735.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sbl:Sbal_3815 peptidase U62, modulator of DNA gyrase YP_001364736.1 PFAM: outer membrane efflux protein; KEGG: sbl:Sbal_3814 outer membrane efflux protein YP_001364737.1 PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3813 secretion protein HlyD family protein YP_001364738.1 PFAM: ABC-2 type transporter; KEGG: sbl:Sbal_3812 ABC-2 type transporter YP_001364739.1 PFAM: ABC-2 type transporter; KEGG: sbl:Sbal_3811 ABC-2 type transporter YP_001364740.1 PFAM: amino acid permease-associated region; KEGG: sbl:Sbal_3809 amino acid permease-associated region YP_001364741.1 PFAM: Ig domain protein group 1 domain protein; KEGG: shn:Shewana3_3633 Ig domain protein, group 1 domain protein YP_001364742.1 PFAM: protein of unknown function DUF615; KEGG: sbl:Sbal_3806 protein of unknown function DUF615 YP_001364743.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sbl:Sbal_3805 peptidase U62, modulator of DNA gyrase YP_001364744.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_3804 TonB-dependent receptor YP_001364745.1 KEGG: sbl:Sbal_3803 hypothetical protein YP_001364746.1 PFAM: protein of unknown function DUF331; KEGG: shw:Sputw3181_3575 protein of unknown function DUF331 YP_001364747.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: sbl:Sbal_3801 fumarate hydratase, class II YP_001364748.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_001364749.1 PFAM: protein of unknown function DUF541; KEGG: sbl:Sbal_3799 protein of unknown function DUF541 YP_001364750.1 PFAM: EAL domain protein; KEGG: sbl:Sbal_3798 diguanylate phosphodiesterase YP_001364751.1 KEGG: sbl:Sbal_3797 hypothetical protein YP_001364752.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_3796 methyltransferase type 11 YP_001364753.1 KEGG: sbl:Sbal_3792 hypothetical protein YP_001364754.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: shw:Sputw3181_3568 OmpA domain protein transmembrane region-containing protein YP_001364755.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: she:Shewmr4_1779 transposase IS116/IS110/IS902 family protein YP_001364756.1 KEGG: mtp:Mthe_0150 leucine rich repeat variant YP_001364758.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001364759.1 KEGG: sbl:Sbal_3784 hypothetical protein YP_001364760.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: sbl:Sbal_3783 activator of HSP90 ATPase 1 family protein YP_001364761.1 PFAM: pentapeptide repeat protein; KEGG: sbl:Sbal_3782 pentapeptide repeat protein YP_001364762.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: shn:Shewana3_3619 molybdopterin oxidoreductase YP_001364763.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_3780 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001364764.1 PFAM: Polysulphide reductase NrfD; KEGG: sbl:Sbal_3779 polysulphide reductase, NrfD YP_001364765.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_3778 protein of unknown function DUF81 YP_001364766.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis YP_001364767.1 TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: sbl:Sbal_3776 O-succinylhomoserine (thiol)-lyase YP_001364768.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways YP_001364769.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor YP_001364770.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_3773 methyl-accepting chemotaxis sensory transducer YP_001364771.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_3772 transcriptional regulator, MarR family YP_001364772.1 PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3771 secretion protein HlyD family protein YP_001364773.1 KEGG: sbl:Sbal_3770 response regulator receiver protein YP_001364774.1 KEGG: sbl:Sbal_3769 cytochrome c family protein YP_001364775.1 PFAM: cytochrome c class I; KEGG: shw:Sputw3181_3546 cytochrome c, class I YP_001364777.1 KEGG: sbl:Sbal_3766 hypothetical protein YP_001364778.1 TIGRFAM: TonB family protein; KEGG: sbl:Sbal_3763 TonB family protein YP_001364779.1 KEGG: sbl:Sbal_3762 hydratase/decarboxylase family protein YP_001364780.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_3761 protein of unknown function DUF6, transmembrane YP_001364781.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_3760 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001364782.1 KEGG: sbl:Sbal_3759 hypothetical protein YP_001364783.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_3757 DEAD/DEAH box helicase domain protein YP_001364784.1 PFAM: peptidase M28; KEGG: sbl:Sbal_3756 peptidase M28 YP_001364785.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: sbl:Sbal_3755 excinuclease ABC, A subunit YP_001364786.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_3754 major facilitator superfamily MFS_1 YP_001364787.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sbl:Sbal_3753 single-strand binding protein YP_001364788.1 PFAM: phage integrase family protein; KEGG: xac:XAC2904 integrase/recombinase YP_001364789.1 PFAM: phage integrase family protein; KEGG: xac:XAC2903 hypothetical protein YP_001364790.1 KEGG: xac:XAC2902 hypothetical protein YP_001364791.1 KEGG: xac:XAC2901 hypothetical protein YP_001364792.1 KEGG: shn:Shewana3_2918 conserved hypothetical protein YP_001364793.1 SMART: AAA ATPase; KEGG: shn:Shewana3_2919 AAA ATPase YP_001364794.1 KEGG: asa:ASA_2567 hypothetical protein YP_001364795.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001364796.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; KEGG: ppr:PBPRA2657 putative UDP-glucose dehydrogenase YP_001364797.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001364799.1 PFAM: Domain of unknown function DUF1835 YP_001364800.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001364802.1 KEGG: pau:PA14_39500 hypothetical protein YP_001364803.1 KEGG: ecs:pO157p01 ToxR-regulated lipoprotein YP_001364804.1 KEGG: plu:plu0971 insecticidal toxin complex protein TcdA5 YP_001364805.1 PFAM: Salmonella virulence plasmid 65kDa B protein; FG-GAP repeat protein; KEGG: plu:plu0515 insecticidal toxin complex protein TcaC YP_001364806.1 TIGRFAM: YD repeat protein; KEGG: yps:YPTB2233 putative insecticidal toxin complex YP_001364807.1 TIGRFAM: YD repeat protein; KEGG: yps:YPTB2233 putative insecticidal toxin complex YP_001364808.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: stm:PSLT045 putative resolvase YP_001364809.1 KEGG: stm:PSLT043 type II secretion system protein YP_001364811.1 KEGG: ppr:PBPRA2822 hypothetical protein YP_001364812.1 PFAM: Ig domain protein group 1 domain protein; KEGG: sbl:Sbal_4398 Ig domain protein, group 2 domain protein YP_001364813.1 PFAM: Ig domain protein group 1 domain protein; KEGG: shm:Shewmr7_2308 hypothetical protein YP_001364815.1 KEGG: shm:Shewmr7_2312 hypothetical protein YP_001364816.1 KEGG: shm:Shewmr7_2311 hypothetical protein YP_001364817.1 KEGG: shm:Shewmr7_2310 hypothetical protein YP_001364819.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001364820.1 PFAM: Ig domain protein group 1 domain protein; KEGG: sbl:Sbal_4398 Ig domain protein, group 2 domain protein YP_001364821.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: saz:Sama_3429 outer membrane protein, putative YP_001364822.1 KEGG: son:SO_A0033 hypothetical protein YP_001364824.1 KEGG: sbl:Sbal_4398 Ig domain protein, group 2 domain protein YP_001364825.1 PFAM: transposase IS3/IS911 family protein; KEGG: son:SO4581 ISSod1, transposase OrfA YP_001364826.1 KEGG: drm:Dred_2827 SMC domain protein YP_001364827.1 PFAM: transposase IS4 family protein; KEGG: sbl:Sbal_3528 transposase, IS4 family protein YP_001364828.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ava:Ava_3453 two component transcriptional regulator, winged helix family YP_001364829.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: ava:Ava_3452 periplasmic sensor signal transduction histidine kinase YP_001364830.1 PFAM: PEBP family protein; KEGG: rba:RB11470 conserved hypothetical protein-putative phospholipid-binding protein YP_001364831.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shn:Shewana3_3456 efflux transporter, RND family, MFP subunit YP_001364832.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: son:SO0821 ABC transporter, ATP-binding/permease protein YP_001364833.1 KEGG: asa:ASA_P5G007 IS element transposase YP_001364834.1 PFAM: transposase IS66; KEGG: reu:Reut_C6337 transposase IS66 YP_001364835.1 PFAM: IS66 Orf2 family protein; KEGG: ppr:PBPRB1076 putative ISVme-ORF2 YP_001364836.1 KEGG: ppr:PBPRB1077 hypothetical protein YP_001364837.1 PFAM: porin Gram-negative type; KEGG: sbl:Sbal_3752 porin, gram-negative type YP_001364838.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB YP_001364839.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB YP_001364840.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit YP_001364841.1 TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; KEGG: sbl:Sbal_3748 anaerobic C4-dicarboxylate antiporter, Dcu family YP_001364842.1 catalyzes the formation of fumarate from aspartate YP_001364843.1 TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; KEGG: sbl:Sbal_3745 L-asparaginases, type II YP_001364844.1 KEGG: shm:Shewmr7_0534 hypothetical protein YP_001364845.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_3743 peptidase M16 domain protein YP_001364846.1 KEGG: sbl:Sbal_3742 hypothetical protein YP_001364847.1 KEGG: sbl:Sbal_3741 hypothetical protein YP_001364848.1 KEGG: sbl:Sbal_3738 putative transmembrane protein YP_001364849.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: sbl:Sbal_3737 MLTD_N domain protein YP_001364850.1 PFAM: protein kinase; leucine-rich repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: sbl:Sbal_3736 protein kinase YP_001364851.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3735 efflux transporter, RND family, MFP subunit YP_001364852.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_3734 acriflavin resistance protein YP_001364853.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_3733 Sel1 domain protein repeat-containing protein YP_001364854.1 PFAM: peptidase domain protein; Peptidase M9A collagenase domain protein; Peptidase M9 domain; KEGG: sbl:Sbal_3732 microbial collagenase YP_001364855.1 TIGRFAM: Quinone oxidoreductase putative PIG3; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sbl:Sbal_3731 alcohol dehydrogenase, zinc-binding domain protein YP_001364856.1 KEGG: sbl:Sbal_3730 hypothetical protein YP_001364857.1 PFAM: Aldose 1-epimerase; KEGG: sbl:Sbal_3729 aldose 1-epimerase YP_001364858.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: sbl:Sbal_3728 galactokinase YP_001364859.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sbl:Sbal_3727 sodium/hydrogen exchanger YP_001364860.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm YP_001364861.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: sbl:Sbal_3725 CutA1 divalent ion tolerance protein YP_001364862.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: sbl:Sbal_3724 FxsA cytoplasmic membrane protein YP_001364863.1 KEGG: sbl:Sbal_3723 hypothetical protein YP_001364864.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_3722 acriflavin resistance protein YP_001364865.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3712 efflux transporter, RND family, MFP subunit YP_001364866.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3711 transcriptional regulator, LysR family YP_001364867.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sbl:Sbal_3710 MATE efflux family protein YP_001364868.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001364869.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth YP_001364870.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: mxa:MXAN_6269 PBS lyase heat-like repeat protein YP_001364871.1 PFAM: helix-turn-helix domain protein; KEGG: son:SO0705 transcriptional regulator, Cro/CI family YP_001364872.1 PFAM: HipA domain protein; KEGG: son:SO0706 hypothetical protein YP_001364873.1 KEGG: aba:Acid345_1940 hypothetical protein YP_001364874.1 KEGG: sbl:Sbal_3702 hypothetical protein YP_001364875.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3701 ABC transporter related YP_001364876.1 KEGG: sbl:Sbal_3700 putative aminopeptidase precursor YP_001364877.1 PFAM: protein of unknown function DUF134; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_3699 protein of unknown function DUF134 YP_001364878.1 KEGG: sbl:Sbal_3698 hypothetical protein YP_001364879.1 KEGG: spc:Sputcn32_0689 thioredoxin domain YP_001364880.1 PFAM: Cold-shock protein DNA-binding; Excalibur domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: sbl:Sbal_3697 putative cold-shock DNA-binding domain protein YP_001364881.1 PFAM: transcriptional regulator PadR family protein; KEGG: sbl:Sbal_3696 transcriptional regulator, PadR-like family YP_001364882.1 KEGG: sbl:Sbal_3695 hypothetical protein YP_001364883.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_3694 diguanylate cyclase with PAS/PAC sensor YP_001364884.1 KEGG: son:SO0736 conserved hypothetical protein YP_001364885.1 PFAM: Alkaline phosphatase; KEGG: sbl:Sbal_3692 alkaline phosphatase YP_001364886.1 PFAM: Alkaline phosphatase; KEGG: sbl:Sbal_3691 alkaline phosphatase YP_001364887.1 KEGG: sbl:Sbal_3690 hypothetical protein YP_001364888.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sbl:Sbal_3689 transcriptional regulator, AraC family YP_001364889.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_3688 lysine exporter protein (LysE/YggA) YP_001364890.1 KEGG: sbl:Sbal_3687 hypothetical protein YP_001364891.1 PFAM: protein of unknown function DUF1568; KEGG: she:Shewmr4_2555 protein of unknown function DUF1568 YP_001364893.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: sbl:Sbal_3681 diguanylate cyclase/phosphodiesterase with GAF sensor YP_001364894.1 KEGG: sbl:Sbal_3680 hypothetical protein YP_001364895.1 KEGG: sbl:Sbal_3679 hypothetical protein YP_001364896.1 KEGG: sbl:Sbal_3678 hypothetical protein YP_001364897.1 PFAM: protein of unknown function RIO1; KEGG: sbl:Sbal_3677 protein of unknown function RIO1 YP_001364898.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_3676 transposase IS3/IS911 family protein YP_001364899.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: sbl:Sbal_3675 OmpA/MotB domain protein YP_001364900.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: sbl:Sbal_3674 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001364901.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: sbl:Sbal_3673 magnesium transporter YP_001364902.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: shw:Sputw3181_3462 phosphotransferase system, phosphocarrier protein HPr YP_001364903.1 PFAM: uncharacterised P-loop ATPase protein UPF0042; KEGG: sbl:Sbal_3671 uncharacterised P-loop ATPase protein UPF0042 YP_001364904.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sbl:Sbal_3670 PTS IIA-like nitrogen-regulatory protein PtsN YP_001364905.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sbl:Sbal_3669 sigma 54 modulation protein/ribosomal protein S30EA YP_001364906.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen YP_001364907.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3667 ABC transporter related YP_001364908.1 TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA family protein; KEGG: sbl:Sbal_3666 OstA family protein YP_001364909.1 PFAM: protein of unknown function DUF1239; KEGG: sbl:Sbal_3665 protein of unknown function DUF1239 YP_001364910.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis YP_001364911.1 TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KEGG: sbl:Sbal_3663 KpsF/GutQ family protein YP_001364912.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3662 ABC transporter related YP_001364913.1 PFAM: protein of unknown function DUF140; KEGG: sbl:Sbal_3661 protein of unknown function DUF140 YP_001364914.1 PFAM: Mammalian cell entry related domain protein; KEGG: sbl:Sbal_3660 mammalian cell entry related domain protein YP_001364915.1 PFAM: toluene tolerance family protein; KEGG: sbl:Sbal_3659 toluene tolerance family protein YP_001364916.1 KEGG: sbl:Sbal_3658 SpoIIAA family protein YP_001364917.1 PFAM: BolA family protein; KEGG: shw:Sputw3181_3447 BolA family protein YP_001364918.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001364919.1 TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sbl:Sbal_3655 periplasmic serine protease DegS YP_001364920.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: sbl:Sbal_3654 protease Do YP_001364921.1 PFAM: AFG1-family ATPase; KEGG: sbl:Sbal_3653 AFG1-family ATPase YP_001364922.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001364923.1 forms a direct contact with the tRNA during translation YP_001364924.1 KEGG: sbl:Sbal_3650 hypothetical protein YP_001364925.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_001364926.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_3648 Sel1 domain protein repeat-containing protein YP_001364927.1 KEGG: sbl:Sbal_3647 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein YP_001364928.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA YP_001364929.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_3645 major facilitator superfamily MFS_1 YP_001364930.1 PFAM: protein of unknown function DUF481; KEGG: sbl:Sbal_3644 protein of unknown function DUF481 YP_001364931.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001364932.1 binds single-stranded DNA at the primosome assembly site YP_001364933.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001364934.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001364935.1 KEGG: sbl:Sbal_3639 hypothetical protein YP_001364936.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_3638 replicative DNA helicase YP_001364937.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer YP_001364938.1 PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2336 transposase IS200-family protein YP_001364939.1 KEGG: sbl:Sbal_3636 putative chemotaxis protein CheX YP_001364940.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_3635 TonB-dependent siderophore receptor YP_001364941.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: sbl:Sbal_3634 2OG-Fe(II) oxygenase YP_001364942.1 KEGG: sbl:Sbal_3633 hypothetical protein YP_001364943.1 PFAM: Protein of unknown function DUF1778; KEGG: sbl:Sbal_3629 hypothetical protein YP_001364944.1 KEGG: sbl:Sbal_3628 GCN5-related N-acetyltransferase YP_001364946.1 KEGG: ecc:c3205 hypothetical protein YP_001364948.1 KEGG: sdn:Sden_3275 GP46 YP_001364949.1 KEGG: sbl:Sbal_3622 hypothetical protein YP_001364950.1 KEGG: sbl:Sbal_3626 hypothetical protein YP_001364951.1 KEGG: sbl:Sbal_3625 hypothetical protein YP_001364952.1 KEGG: sbl:Sbal_3624 hypothetical protein YP_001364953.1 KEGG: sbl:Sbal_3621 hypothetical protein YP_001364954.1 KEGG: sbl:Sbal_3620 hypothetical protein YP_001364955.1 KEGG: sbl:Sbal_3619 hypothetical protein YP_001364956.1 KEGG: aba:Acid345_2425 hypothetical protein YP_001364957.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0225 putative acetyltransferase YP_001364959.1 PFAM: SEC-C motif domain protein; KEGG: ilo:IL1619 hypothetical protein YP_001364960.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: sbl:Sbal_3616 putative phage repressor YP_001364961.1 KEGG: sbl:Sbal_3615 hypothetical protein YP_001364962.1 KEGG: sbl:Sbal_3614 hypothetical protein YP_001364963.1 KEGG: sbl:Sbal_3612 putative replication protein YP_001364964.1 PFAM: replication P family protein; KEGG: sbl:Sbal_3611 replication P family protein YP_001364965.1 PFAM: phage integrase family protein; KEGG: sbl:Sbal_3610 phage integrase family protein YP_001364966.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_3609 transcriptional regulator, XRE family YP_001364967.1 KEGG: sbl:Sbal_3608 hypothetical protein YP_001364968.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_001364969.1 PFAM: glycoside hydrolase family 24; KEGG: sbl:Sbal_3605 glycoside hydrolase, family 24 YP_001364970.1 KEGG: sbl:Sbal_3604 hypothetical protein YP_001364971.1 KEGG: sbl:Sbal_3603 hypothetical protein YP_001364972.1 PFAM: phage DNA packaging Nu1; KEGG: sbl:Sbal_3602 phage DNA packaging Nu1 YP_001364973.1 PFAM: phage terminase GpA; KEGG: sbl:Sbal_3601 phage terminase GpA YP_001364974.1 KEGG: sbl:Sbal_3600 hypothetical protein YP_001364975.1 TIGRFAM: phage portal protein, lambda family; PFAM: phage portal protein lambda; KEGG: sbl:Sbal_3599 phage portal protein, lambda family YP_001364976.1 PFAM: peptidase S14 ClpP; KEGG: sbl:Sbal_3598 peptidase S14, ClpP YP_001364977.1 KEGG: sbl:Sbal_3597 gifsy-2 prophage; putative RecA/RadA recombinase YP_001364978.1 KEGG: sbl:Sbal_3596 hypothetical protein YP_001364979.1 KEGG: sbl:Sbal_3595 hypothetical protein YP_001364980.1 KEGG: sbl:Sbal_3594 hypothetical protein YP_001364981.1 KEGG: sbl:Sbal_3593 hypothetical protein YP_001364982.1 PFAM: protein of unknown function DUF1044; KEGG: cbu:CBUA0028 hypothetical protein YP_001364983.1 KEGG: ilo:IL0302 transcriptional regulator, Cro/CI/xre family YP_001364984.1 TIGRFAM: Phage regulatory protein Rha family; KEGG: sfr:Sfri_1666 uncharacterized phage-encoded protein-like protein YP_001364985.1 TIGRFAM: phage tape measure protein; KEGG: sfr:Sfri_1684 phage tape measure protein YP_001364986.1 KEGG: sbl:Sbal_3591 hypothetical protein YP_001364987.1 KEGG: sbl:Sbal_3590 hypothetical protein YP_001364988.1 KEGG: sbl:Sbal_3589 hypothetical protein YP_001364989.1 KEGG: son:SO0687 hypothetical protein YP_001364990.1 KEGG: sbl:Sbal_3588 hypothetical protein YP_001364991.1 KEGG: sbl:Sbal_3587 hypothetical protein YP_001364992.1 KEGG: vpa:VP0637 hypothetical protein YP_001364993.1 PFAM: phage integrase family protein; KEGG: sbl:Sbal_3586 phage integrase family protein YP_001364994.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: sbl:Sbal_3585 TIM-barrel protein, YjbN family YP_001364995.1 KEGG: sbl:Sbal_3584 hypothetical protein YP_001364996.1 PFAM: PspC domain protein; KEGG: sbl:Sbal_3583 phage shock protein C, PspC YP_001364997.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sbl:Sbal_3582 enoyl-CoA hydratase/isomerase YP_001364998.1 PFAM: protein of unknown function DUF461; KEGG: sbl:Sbal_3581 protein of unknown function DUF461 YP_001364999.1 KEGG: shn:Shewana3_0723 conserved hypothetical protein YP_001365000.1 KEGG: sbl:Sbal_3579 hypothetical protein YP_001365001.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell YP_001365002.1 PFAM: NUDIX hydrolase; KEGG: sbl:Sbal_3577 ADP-ribose diphosphatase YP_001365003.1 PFAM: protein of unknown function DUF1249; KEGG: sbl:Sbal_3576 protein of unknown function DUF1249 YP_001365004.1 PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: sbl:Sbal_3575 calcineurin phosphoesterase C-terminal domain protein YP_001365005.1 PFAM: protein of unknown function UPF0227; KEGG: sbl:Sbal_3574 protein of unknown function UPF0227 YP_001365006.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001365007.1 KEGG: sbl:Sbal_3572 L-sorbosone dehydrogenase, putative YP_001365008.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001365009.1 PFAM: porin Gram-negative type; KEGG: sbl:Sbal_3570 porin, gram-negative type YP_001365010.1 PFAM: porin Gram-negative type; KEGG: sbl:Sbal_3569 porin, gram-negative type YP_001365011.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: sbl:Sbal_3568 UBA/ThiF-type NAD/FAD binding protein YP_001365012.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_3567 integral membrane sensor signal transduction histidine kinase YP_001365013.1 KEGG: sbl:Sbal_3566 hypothetical protein YP_001365014.1 KEGG: sbl:Sbal_3565 hypothetical protein YP_001365015.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; SMART: histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_3564 methyl-accepting chemotaxis sensory transducer YP_001365016.1 Part of the ABC transporter complex modABC involved in molybdenum import YP_001365017.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE YP_001365018.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sbl:Sbal_3538 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001365019.1 TIGRFAM: molybdate transport repressor, ModE; PFAM: regulatory protein LysR; TOBE domain protein; KEGG: sbl:Sbal_3537 transcriptional regulator, ModE family YP_001365020.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3536 efflux transporter, RND family, MFP subunit YP_001365021.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: sbl:Sbal_3535 ABC transporter related YP_001365022.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: sbl:Sbal_3534 RND efflux system, outer membrane lipoprotein, NodT family YP_001365023.1 PFAM: peptidase M50; KEGG: sbl:Sbal_3533 peptidase M50 YP_001365024.1 KEGG: sbl:Sbal_3532 hypothetical protein YP_001365025.1 PFAM: protein of unknown function DUF342; KEGG: sbl:Sbal_3531 protein of unknown function DUF342 YP_001365026.1 PFAM: methyltransferase small; Methyltransferase small domain protein; KEGG: sbl:Sbal_3530 rRNA (guanine-N(2)-)-methyltransferase YP_001365027.1 PFAM: Alkaline phosphatase; KEGG: sbl:Sbal_3529 alkaline phosphatase YP_001365028.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_001365029.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase YP_001365030.1 PFAM: Endonuclease I; KEGG: sbl:Sbal_3525 deoxyribonuclease I YP_001365031.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: sbl:Sbal_3524 protein of unknown function DUF335, SprT YP_001365032.1 KEGG: sbl:Sbal_3523 hypothetical protein YP_001365033.1 PFAM: penicillin-binding protein transpeptidase; KEGG: sbl:Sbal_3522 beta-lactamase YP_001365034.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3521 transcriptional regulator, LysR family YP_001365035.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sbl:Sbal_3520 carbamoyl-phosphate synthase L chain, ATP-binding YP_001365036.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein family 3; KEGG: shn:Shewana3_3437 diguanylate cyclase YP_001365037.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001365038.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3514 transcriptional regulator, LysR family YP_001365039.1 KEGG: sbl:Sbal_3513 hypothetical protein YP_001365040.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sbl:Sbal_3512 nitrate reductase cytochrome c-type subunit (NapB) YP_001365041.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC YP_001365042.1 PFAM: NapD family protein; KEGG: sbl:Sbal_3510 NapD family protein YP_001365043.1 KEGG: shn:Shewana3_3428 conserved hypothetical protein YP_001365044.1 KEGG: she:Shewmr4_0707 prepilin-type cleavage/methylation-like protein YP_001365045.1 KEGG: shn:Shewana3_3426 prepilin-type cleavage/methylation-like protein YP_001365046.1 KEGG: shm:Shewmr7_3313 methylation site containing protein YP_001365047.1 KEGG: she:Shewmr4_0710 methylation site containing protein YP_001365048.1 KEGG: sbl:Sbal_3509 hypothetical protein YP_001365049.1 PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_3508 protein of unknown function DUF214 YP_001365050.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3507 ABC transporter related YP_001365051.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sbl:Sbal_3506 amino acid carrier protein YP_001365052.1 KEGG: sbl:Sbal_3505 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001365053.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_3504 response regulator receiver modulated metal dependent phosphohydrolase YP_001365054.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: sbl:Sbal_3503 glycine cleavage T protein (aminomethyl transferase) YP_001365055.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_001365056.1 KEGG: sbl:Sbal_3501 hypothetical protein YP_001365057.1 PFAM: regulatory protein LuxR; KEGG: sbl:Sbal_3500 response regulator receiver protein YP_001365058.1 PFAM: Curlin associated repeat protein; KEGG: sbl:Sbal_3499 curlin associated repeat protein YP_001365059.1 PFAM: Curlin associated repeat protein; KEGG: sbl:Sbal_3498 curlin associated repeat protein YP_001365060.1 KEGG: sbl:Sbal_3497 hypothetical protein YP_001365061.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001365062.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001365063.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: sbl:Sbal_3493 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_001365064.1 TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: sbl:Sbal_3492 poly(A) polymerase YP_001365065.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: sbl:Sbal_3491 glutamate--tRNA ligase YP_001365066.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: sbl:Sbal_3490 transcriptional regulator, TraR/DksA family YP_001365067.1 Regulatory factor involved in maltose metabolism YP_001365068.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide YP_001365069.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3487 GCN5-related N-acetyltransferase YP_001365070.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: sbl:Sbal_3486 phosphoribulokinase YP_001365071.1 KEGG: sbl:Sbal_3485 protein of unknown function UPF0270 YP_001365072.1 KEGG: sbl:Sbal_3484 alpha/beta hydrolase fold YP_001365073.1 KEGG: sbl:Sbal_3483 hypothetical protein YP_001365074.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: sbl:Sbal_3482 glucose-methanol-choline oxidoreductase YP_001365075.1 KEGG: sbl:Sbal_3481 anti-ECFsigma factor, ChrR YP_001365076.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_3480 short-chain dehydrogenase/reductase SDR YP_001365077.1 PFAM: helix-turn-helix HxlR type; KEGG: sbl:Sbal_3479 transcriptional regulator, HxlR family YP_001365078.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: sbl:Sbal_3478 glutathione-dependent formaldehyde-activating, GFA YP_001365079.1 KEGG: sbl:Sbal_3477 hypothetical protein YP_001365080.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3476 ABC transporter related YP_001365081.1 KEGG: shw:Sputw3181_0827 hypothetical protein YP_001365082.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbl:Sbal_3471 short-chain dehydrogenase/reductase SDR YP_001365083.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sbl:Sbal_3470 methylated-DNA--protein-cysteine methyltransferase YP_001365084.1 PFAM: Pirin domain protein; KEGG: sbl:Sbal_3469 pirin domain protein domain protein YP_001365085.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA YP_001365086.1 KEGG: sbl:Sbal_3467 hypothetical protein YP_001365087.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_3466 DEAD/DEAH box helicase domain protein YP_001365088.1 KEGG: sbl:Sbal_3465 hypothetical protein YP_001365089.1 KEGG: sbl:Sbal_3464 hypothetical protein YP_001365090.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c YP_001365091.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c YP_001365092.1 TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: sbl:Sbal_3461 putative adenylyl cyclase CyaB YP_001365093.1 KEGG: sbl:Sbal_3460 DNA binding domain, excisionase family YP_001365094.1 PFAM: protein of unknown function DUF599; KEGG: sbl:Sbal_3459 protein of unknown function DUF599 YP_001365095.1 KEGG: pst:PSPTO_2390 hypothetical protein YP_001365097.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain YP_001365098.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: sbl:Sbal_3457 SH3, type 3 domain protein YP_001365099.1 PFAM: phosphate transporter; KEGG: sbl:Sbal_3456 phosphate transporter YP_001365100.1 PFAM: protein of unknown function DUF47; KEGG: sbl:Sbal_3455 protein of unknown function DUF47 YP_001365101.1 PFAM: adenylate cyclase; KEGG: sbl:Sbal_3454 adenylate cyclase YP_001365102.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sbl:Sbal_3453 ion transport 2 domain protein YP_001365103.1 KEGG: sbl:Sbal_3452 hypothetical protein YP_001365104.1 KEGG: sbl:Sbal_3451 hypothetical protein YP_001365105.1 PFAM: PspA/IM30 family protein; KEGG: sbl:Sbal_3450 phage shock protein A, PspA YP_001365106.1 KEGG: sbl:Sbal_3449 hypothetical protein YP_001365107.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine YP_001365108.1 PFAM: protein of unknown function DUF350; KEGG: sbl:Sbal_3447 protein of unknown function DUF350 YP_001365109.1 KEGG: sbl:Sbal_3446 hypothetical protein YP_001365110.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_001365111.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sbl:Sbal_3444 diguanylate cyclase YP_001365112.1 PFAM: protein of unknown function DUF897; KEGG: sbl:Sbal_3443 protein of unknown function DUF897 YP_001365113.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3442 transcriptional regulator, LysR family YP_001365114.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_3441 methyl-accepting chemotaxis sensory transducer YP_001365115.1 PFAM: AFG1-family ATPase; KEGG: sbl:Sbal_3439 AFG1-family ATPase YP_001365116.1 PFAM: protein of unknown function DUF583; KEGG: she:Shewmr4_3101 protein of unknown function DUF583 YP_001365117.1 PFAM: phosphate-selective porin O and P; KEGG: sbl:Sbal_3436 phosphate-selective porin O and P YP_001365118.1 PFAM: Uncharacterized protein UPF0065; KEGG: sbl:Sbal_3435 uncharacterized protein UPF0065 YP_001365119.1 KEGG: she:Shewmr4_3098 putative tricarboxylic transport membrane protein YP_001365120.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: she:Shewmr4_3097 protein of unknown function DUF112, transmembrane YP_001365121.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sbl:Sbal_3432 signal transduction histidine kinase regulating citrate/malate metabolism YP_001365122.1 also contains unknown domain; PFAM: response regulator receiver; KEGG: sbl:Sbal_3431 response regulator receiver and unknown domain protein YP_001365123.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_3430 peptidase M16 domain protein YP_001365124.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_3429 peptidase M16 domain protein YP_001365125.1 KEGG: sbl:Sbal_3428 hypothetical protein YP_001365126.1 PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: sbl:Sbal_3427 ErfK/YbiS/YcfS/YnhG family protein YP_001365127.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli YP_001365128.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: sbl:Sbal_3424 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_001365129.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose YP_001365130.1 KEGG: sbl:Sbal_3422 hypothetical protein YP_001365131.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_3421 transcriptional regulator, TetR family YP_001365132.1 KEGG: sbl:Sbal_3420 hypothetical protein YP_001365133.1 KEGG: sbl:Sbal_3419 hypothetical protein YP_001365134.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme YP_001365135.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm YP_001365136.1 TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: sbl:Sbal_3416 sulfite reductase (NADPH) flavoprotein, alpha chain YP_001365137.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_001365138.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite YP_001365139.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan YP_001365140.1 SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: son:SO3733.1 hypothetical proline hydroxylase YP_001365141.1 KEGG: sbl:Sbal_3412 hypothetical protein YP_001365142.1 KEGG: sbl:Sbal_3411 hypothetical protein YP_001365143.1 PFAM: phospholipase A1; KEGG: sbl:Sbal_3410 phospholipase A(1) YP_001365144.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sbl:Sbal_3409 uroporphyrin-III C-methyltransferase YP_001365145.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001365146.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ YP_001365147.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sbl:Sbal_3406 TrkA-C domain protein YP_001365148.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis YP_001365149.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_3404 integral membrane sensor signal transduction histidine kinase YP_001365150.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: sbl:Sbal_3403 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_001365151.1 KEGG: sbl:Sbal_3402 hypothetical protein YP_001365152.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_3401 major facilitator superfamily MFS_1 YP_001365153.1 KEGG: sfr:Sfri_0810 hypothetical protein YP_001365154.1 KEGG: sfr:Sfri_0811 putative lipoprotein YP_001365155.1 PFAM: protein of unknown function DUF1111; KEGG: sdn:Sden_0723 protein of unknown function DUF1111 YP_001365156.1 KEGG: sbl:Sbal_3400 protoporphyrinogen oxidase YP_001365157.1 KEGG: sbl:Sbal_3399 hypothetical protein YP_001365158.1 PFAM: DSBA oxidoreductase; KEGG: sbl:Sbal_3398 DsbA oxidoreductase YP_001365159.1 PFAM: heat shock protein DnaJ domain protein; KEGG: sbl:Sbal_3397 heat shock protein DnaJ domain protein YP_001365160.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive YP_001365161.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aha:AHA_0849 ribosomal-protein-alanine acetyltransferase YP_001365163.1 TIGRFAM: RarD protein, DMT superfamily transporter; KEGG: psa:PST_2954 RarD protein YP_001365164.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator YP_001365165.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_0916 ABC transporter related YP_001365166.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shw:Sputw3181_0917 polar amino acid ABC transporter, inner membrane subunit YP_001365167.1 PFAM: extracellular solute-binding protein family 3; KEGG: sbl:Sbal_3392 extracellular solute-binding protein, family 3 YP_001365168.1 KEGG: sbl:Sbal_3391 hypothetical protein YP_001365169.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3390 transcriptional regulator, LysR family YP_001365170.1 PFAM: LrgA family protein; KEGG: sbl:Sbal_3389 LrgA family protein YP_001365171.1 PFAM: LrgB family protein; KEGG: sbl:Sbal_3388 LrgB family protein YP_001365172.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3387 GCN5-related N-acetyltransferase YP_001365173.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7 YP_001365174.1 PFAM: Rhomboid family protein; KEGG: sbl:Sbal_3385 rhomboid family protein YP_001365175.1 PFAM: sodium/calcium exchanger membrane region; KEGG: sbl:Sbal_3384 sodium/calcium exchanger membrane region YP_001365176.1 PFAM: MORN variant repeat protein; KEGG: sbl:Sbal_3383 MORN variant repeat protein YP_001365177.1 KEGG: sbl:Sbal_3382 MORN variant repeat protein YP_001365178.1 KEGG: sbl:Sbal_3381 hypothetical protein YP_001365179.1 PFAM: Na dependent nucleoside transporter; nucleoside recognition domain protein; Na dependent nucleoside transporter domain protein; KEGG: sbl:Sbal_3380 Na+ dependent nucleoside transporter domain protein YP_001365180.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3379 transcriptional regulator, LysR family YP_001365181.1 PFAM: dienelactone hydrolase; KEGG: sbl:Sbal_3378 dienelactone hydrolase YP_001365182.1 PFAM: cytochrome c class I; KEGG: sbl:Sbal_3376 cytochrome c, class I YP_001365183.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sbl:Sbal_3375 (2Fe-2S)-binding domain protein YP_001365184.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sbl:Sbal_3374 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001365185.1 KEGG: shm:Shewmr7_3187 hypothetical protein YP_001365186.1 PFAM: protein of unknown function DUF262; KEGG: llc:LACR_0316 hypothetical protein YP_001365188.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: sbl:Sbal_3371 methyl-accepting chemotaxis sensory transducer YP_001365189.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_001365190.1 PFAM: Phosphoglycerate mutase; KEGG: sbl:Sbal_3367 phosphoglycerate mutase YP_001365191.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3366 ABC transporter related YP_001365192.1 PFAM: transport system permease protein; KEGG: sbl:Sbal_3365 transport system permease protein YP_001365193.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_001365194.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole YP_001365195.1 PFAM: cobalbumin biosynthesis protein; KEGG: sbl:Sbal_3362 cobalbumin biosynthesis enzyme YP_001365196.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation YP_001365197.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide YP_001365198.1 KEGG: sbl:Sbal_3359 hypothetical protein YP_001365199.1 PFAM: periplasmic binding protein; KEGG: sbl:Sbal_3358 periplasmic binding protein YP_001365200.1 PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_3357 aldehyde dehydrogenase YP_001365201.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone YP_001365202.1 KEGG: sbl:Sbal_3355 cell division protein ZipA YP_001365203.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3354 GCN5-related N-acetyltransferase YP_001365204.1 KEGG: sbl:Sbal_3353 hypothetical protein YP_001365205.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sbl:Sbal_3352 putative transcriptional regulator, GntR family YP_001365206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3351 GCN5-related N-acetyltransferase YP_001365207.1 PFAM: protein of unknown function DUF805; KEGG: slo:Shew_2991 protein of unknown function DUF805 YP_001365208.1 KEGG: sbl:Sbal_3346 protein of unknown function DUF1486 YP_001365209.1 KEGG: sbl:Sbal_3345 hypothetical protein YP_001365210.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_001365211.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sbl:Sbal_3343 efflux transporter, RND family, MFP subunit YP_001365212.1 KEGG: sbl:Sbal_3342 hypothetical protein YP_001365213.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_3341 ABC transporter related YP_001365214.1 PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_3340 protein of unknown function DUF214 YP_001365215.1 PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_3339 protein of unknown function DUF214 YP_001365216.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sbl:Sbal_3338 two component, sigma54 specific, transcriptional regulator, fis family YP_001365217.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_3337 integral membrane sensor signal transduction histidine kinase YP_001365218.1 KEGG: sbl:Sbal_3336 curli production assembly/transport component CsgE, putative YP_001365219.1 KEGG: sbl:Sbal_3335 curli production assembly/transport component CsgF, putative YP_001365220.1 PFAM: Curli production assembly/transport component CsgG; KEGG: sbl:Sbal_3334 curli production assembly/transport component CsgG YP_001365221.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_3333 transcriptional regulator, TetR family YP_001365222.1 PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_3332 aldehyde dehydrogenase YP_001365223.1 KEGG: sbl:Sbal_3331 hypothetical protein YP_001365224.1 PFAM: UspA domain protein; KEGG: sbl:Sbal_3330 UspA domain protein YP_001365225.1 PFAM: UspA domain protein; KEGG: sbl:Sbal_3329 UspA domain protein YP_001365226.1 SMART: extracellular solute-binding protein family 3; KEGG: sbl:Sbal_3328 extracellular solute-binding protein, family 3 YP_001365227.1 PFAM: protein of unknown function DUF924; KEGG: sbl:Sbal_3327 protein of unknown function DUF924 YP_001365228.1 KEGG: sbl:Sbal_3326 hypothetical protein YP_001365229.1 KEGG: sbl:Sbal_0945 hypothetical protein YP_001365230.1 with HmuTU is involved in the transport of hemin YP_001365231.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: sbl:Sbal_0947 transport system permease protein YP_001365232.1 PFAM: periplasmic binding protein; KEGG: sbl:Sbal_0948 periplasmic binding protein YP_001365233.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbl:Sbal_0949 biopolymer transport protein ExbD/TolR YP_001365234.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbl:Sbal_0950 MotA/TolQ/ExbB proton channel YP_001365235.1 TIGRFAM: TonB family protein; KEGG: sbl:Sbal_0951 TonB family protein YP_001365236.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0952 TonB-dependent heme/hemoglobin receptor family protein YP_001365237.1 PFAM: protein of unknown function DUF1008; KEGG: sbl:Sbal_0953 protein of unknown function DUF1008 YP_001365238.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: sbl:Sbal_0954 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_001365239.1 TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0955 lipid A ABC exporter family, fused ATPase and inner membrane subunits YP_001365240.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sbl:Sbal_0956 AMP-dependent synthetase and ligase YP_001365241.1 TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_0957 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001365242.1 TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase; KEGG: sbl:Sbal_0958 transcriptional regulator, fis family YP_001365243.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0959 TonB-dependent receptor YP_001365244.1 KEGG: sbl:Sbal_0960 thiol:disulfide interchange protein, putative YP_001365245.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: sbl:Sbal_0961 peptidase S10, serine carboxypeptidase YP_001365246.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_0962 lysine exporter protein (LysE/YggA) YP_001365247.1 KEGG: sbl:Sbal_0963 hypothetical protein YP_001365248.1 KEGG: sbl:Sbal_0964 pilin, putative YP_001365249.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine YP_001365250.1 PFAM: Polyprenyl synthetase; KEGG: sbl:Sbal_0966 trans-hexaprenyltranstransferase YP_001365251.1 PFAM: ribosomal protein L21; KEGG: sbl:Sbal_0967 ribosomal protein L21 YP_001365252.1 involved in the peptidyltransferase reaction during translation YP_001365253.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_001365254.1 PFAM: protein of unknown function DUF1212; KEGG: sbl:Sbal_0970 protein of unknown function DUF1212 YP_001365255.1 KEGG: sbl:Sbal_0971 hypothetical protein YP_001365256.1 PFAM: dihydrofolate reductase region; KEGG: sbl:Sbal_0972 dihydrofolate reductase YP_001365257.1 KEGG: sbl:Sbal_0973 hypothetical protein YP_001365258.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0974 methyl-accepting chemotaxis sensory transducer YP_001365259.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP YP_001365260.1 protein associated with Co2+ and Mg2+ efflux YP_001365261.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001365262.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate) YP_001365263.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sbl:Sbal_0979 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001365264.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: sbl:Sbal_0980 organic solvent tolerance protein YP_001365265.1 PFAM: aminoglycoside phosphotransferase; KEGG: sbl:Sbal_0981 aminoglycoside phosphotransferase YP_001365266.1 PFAM: Nucleotidyl transferase; KEGG: sbl:Sbal_0982 nucleotidyl transferase YP_001365267.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system YP_001365268.1 KEGG: sbl:Sbal_0984 hypothetical protein YP_001365269.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sbl:Sbal_0985 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001365270.1 KEGG: son:SO3630 hypothetical protein YP_001365271.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_0986 tetratricopeptide domain protein YP_001365272.1 KEGG: sbl:Sbal_0987 hypothetical protein YP_001365273.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_0988 pseudouridine synthase YP_001365274.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis YP_001365275.1 KEGG: sbl:Sbal_0990 hypothetical protein YP_001365276.1 PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_0991 secretion protein HlyD family protein YP_001365277.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_0992 AAA ATPase, central domain protein YP_001365278.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0994 sulfate ABC transporter, ATPase subunit YP_001365279.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_0995 sulfate ABC transporter, inner membrane subunit CysW YP_001365280.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_0996 sulfate ABC transporter, inner membrane subunit CysT YP_001365281.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: sbl:Sbal_0997 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001365282.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide YP_001365283.1 KEGG: sbl:Sbal_0999 hypothetical protein YP_001365284.1 PFAM: protein of unknown function DUF1289; KEGG: sbl:Sbal_1000 protein of unknown function DUF1289 YP_001365285.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_1001 integral membrane sensor signal transduction histidine kinase YP_001365286.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_1002 two component transcriptional regulator, winged helix family YP_001365287.1 KEGG: sbl:Sbal_1003 hypothetical protein YP_001365288.1 PFAM: MltA-interacting MipA family protein; KEGG: sbl:Sbal_1004 MltA-interacting MipA family protein YP_001365289.1 KEGG: sbl:Sbal_1005 hypothetical protein YP_001365290.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: sbl:Sbal_1006 GPR1/FUN34/YaaH family protein YP_001365291.1 KEGG: sbl:Sbal_1007 hypothetical protein YP_001365292.1 PFAM: Protein of unknown function DUF1971; KEGG: sbl:Sbal_1008 tellurite resistance protein TehB YP_001365293.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_1009 glyoxalase/bleomycin resistance protein/dioxygenase YP_001365294.1 PFAM: NADPH-dependent FMN reductase; KEGG: sbl:Sbal_1010 NADPH-dependent FMN reductase YP_001365295.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: sbl:Sbal_1011 putative transcriptional regulator YP_001365296.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_1012 TPR repeat-containing protein YP_001365297.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_1013 pseudouridine synthase YP_001365298.1 PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sbl:Sbal_1014 globin YP_001365299.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_1015 methyl-accepting chemotaxis sensory transducer YP_001365300.1 KEGG: sbl:Sbal_1016 putative lipoprotein YP_001365301.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_1017 pseudouridine synthase, RluA family YP_001365302.1 PFAM: protein of unknown function DUF152; KEGG: sbl:Sbal_1018 protein of unknown function DUF152 YP_001365303.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_1019 ATPase AAA-2 domain protein YP_001365304.1 KEGG: sbl:Sbal_1020 hypothetical protein YP_001365305.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sbl:Sbal_1021 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001365306.1 TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; KEGG: sbl:Sbal_1024 sodium pump decarboxylases, gamma subunit YP_001365307.1 catalyzes the formation of pyruvate from oxaloacetate YP_001365308.1 TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; KEGG: sbl:Sbal_1026 sodium ion-translocating decarboxylase, beta subunit YP_001365309.1 KEGG: sbl:Sbal_1027 hypothetical protein YP_001365310.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbl:Sbal_1028 sodium:dicarboxylate symporter YP_001365311.1 KEGG: sbl:Sbal_1029 hypothetical protein YP_001365312.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_1030 peptidase M16 domain protein YP_001365313.1 involved in the first step of glutathione biosynthesis YP_001365314.1 KEGG: sbl:Sbal_1032 hypothetical protein YP_001365315.1 KEGG: sbl:Sbal_1033 hypothetical protein YP_001365316.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sbl:Sbal_1034 diguanylate cyclase YP_001365317.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway YP_001365318.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: sbl:Sbal_1036 phosphoribosylaminoimidazole carboxylase, catalytic subunit YP_001365319.1 putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport YP_001365320.1 PFAM: von Willebrand factor type A; KEGG: sbl:Sbal_1038 von Willebrand factor, type A YP_001365321.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_1039 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001365322.1 KEGG: sbl:Sbal_1040 hypothetical protein YP_001365323.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: sbl:Sbal_1041 hemerythrin HHE cation binding domain protein YP_001365324.1 KEGG: sbl:Sbal_1042 hypothetical protein YP_001365325.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family YP_001365326.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: sbl:Sbal_1044 transaldolase YP_001365327.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: sbl:Sbal_1045 OmpA/MotB domain protein YP_001365328.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: sbl:Sbal_1046 phosphoketolase YP_001365329.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sbl:Sbal_1047 amino acid carrier protein YP_001365330.1 PFAM: protein of unknown function DUF328; KEGG: sbl:Sbal_1048 protein of unknown function DUF328 YP_001365331.1 PFAM: peptidase M20; peptidase M28; KEGG: sbl:Sbal_1049 peptidase M28 YP_001365332.1 PFAM: regulatory protein ArsR; KEGG: shw:Sputw3181_3110 regulatory protein, ArsR YP_001365333.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001365334.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: sbl:Sbal_1052 integral membrane protein MviN YP_001365335.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; KEGG: sbl:Sbal_1053 riboflavin biosynthesis protein RibF YP_001365336.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme YP_001365337.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001365338.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_1056 peptidylprolyl isomerase, FKBP-type YP_001365339.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001365340.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: sbl:Sbal_1058 type IV pilus modification protein PilV YP_001365341.1 KEGG: sbl:Sbal_1059 type IV pilus assembly protein PilW YP_001365342.1 KEGG: sbl:Sbal_1060 type IV pilus assembly protein PilX YP_001365343.1 KEGG: sbl:Sbal_1061 type IV pilin biogenesis protein, putative YP_001365344.1 KEGG: sbl:Sbal_1062 type IV pilus biogenesis protein PilE YP_001365345.1 KEGG: sbl:Sbal_1063 hypothetical protein YP_001365346.1 KEGG: sbl:Sbal_1064 type IV pilus biogenesis protein, putative YP_001365347.1 KEGG: son:SO3520 type IV pilus biogenesis protein, putative YP_001365348.1 PFAM: nitrogen regulatory protein P-II; KEGG: sbl:Sbal_1069 nitrogen regulatory protein P-II YP_001365349.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: shw:Sputw3181_3093 NADH dehydrogenase YP_001365350.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbl:Sbal_1071 regulatory protein, LacI YP_001365351.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1075 TonB-dependent receptor YP_001365352.1 PFAM: SapC family protein; KEGG: sbl:Sbal_1077 SapC family protein YP_001365353.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sbl:Sbal_1078 tryptophan halogenase YP_001365354.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sbl:Sbal_1079 tryptophan halogenase YP_001365355.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_1080 protein of unknown function DUF81 YP_001365356.1 KEGG: sbl:Sbal_1081 hypothetical protein YP_001365357.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_1082 methyl-accepting chemotaxis sensory transducer YP_001365358.1 PFAM: glycoside hydrolase family 20; Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; glycoside hydrolase family 20 domain protein; KEGG: shn:Shewana3_3115 glycoside hydrolase, family 20 YP_001365359.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: sbl:Sbal_1084 ATPase, BadF/BadG/BcrA/BcrD type YP_001365360.1 PFAM: sugar isomerase (SIS); KEGG: sbl:Sbal_1085 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_001365361.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; KEGG: sbl:Sbal_1086 N-acetylglucosamine-6-phosphate deacetylase YP_001365362.1 KEGG: sbl:Sbal_1087 hypothetical protein YP_001365363.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1088 glucose/galactose transporter YP_001365364.1 KEGG: sbl:Sbal_1089 hypothetical protein YP_001365365.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: sbl:Sbal_1090 protein of unknown function DUF861, cupin_3 YP_001365366.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_1091 methylmalonate-semialdehyde dehydrogenase YP_001365367.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate YP_001365368.1 PFAM: aldehyde dehydrogenase; KEGG: shw:Sputw3181_3079 aldehyde dehydrogenase (NAD(+)) YP_001365369.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: shw:Sputw3181_0559 regulatory protein GntR, HTH YP_001365370.1 PFAM: outer membrane porin; KEGG: shw:Sputw3181_0558 outer membrane porin YP_001365371.1 PFAM: Tannase and feruloyl esterase; KEGG: shw:Sputw3181_0557 tannase and feruloyl esterase YP_001365372.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: sfr:Sfri_3694 twin-arginine translocation pathway signal YP_001365373.1 KEGG: shw:Sputw3181_0555 hypothetical protein YP_001365374.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: sbl:Sbal_1099 rare lipoprotein A YP_001365375.1 PFAM: Rhodanese domain protein; KEGG: spc:Sputcn32_1088 3-mercaptopyruvate sulfurtransferase YP_001365376.1 KEGG: sbl:Sbal_1102 hypothetical protein YP_001365377.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_1103 FAD dependent oxidoreductase YP_001365378.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: sbl:Sbal_1104 cupin 2, conserved barrel domain protein YP_001365379.1 PFAM: peptidase C26; KEGG: sbl:Sbal_1106 peptidase C26 YP_001365380.1 PFAM: glutamine synthetase catalytic region; KEGG: sbl:Sbal_1107 glutamate--ammonia ligase YP_001365381.1 PFAM: extracellular solute-binding protein family 1; KEGG: sbl:Sbal_1108 extracellular solute-binding protein, family 1 YP_001365382.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_1109 spermidine/putrescine ABC transporter ATPase subunit YP_001365383.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_1110 binding-protein-dependent transport systems inner membrane component YP_001365384.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_1111 binding-protein-dependent transport systems inner membrane component YP_001365385.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_1112 FAD dependent oxidoreductase YP_001365386.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_1113 succinic semialdehyde dehydrogenase YP_001365387.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate YP_001365388.1 PFAM: luciferase family protein; KEGG: sbl:Sbal_1115 luciferase family protein YP_001365389.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1117 amino acid/peptide transporter YP_001365390.1 KEGG: sbl:Sbal_1120 hypothetical protein YP_001365391.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sbl:Sbal_1121 tryptophan halogenase YP_001365392.1 SMART: transcription factor jumonji jmjC domain protein; KEGG: sbl:Sbal_1122 transcription factor jumonji, JmjC domain protein YP_001365393.1 PFAM: SapC family protein; KEGG: sbl:Sbal_1123 SapC family protein YP_001365394.1 PFAM: tryptophan halogenase; KEGG: sbl:Sbal_1124 tryptophan halogenase YP_001365395.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1125 TonB-dependent receptor, plug YP_001365396.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbl:Sbal_1129 periplasmic binding protein/LacI transcriptional regulator YP_001365397.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1130 sugar (glycoside-pentoside-hexuronide) transporter YP_001365398.1 PFAM: glycoside hydrolase family 1; KEGG: sbl:Sbal_1131 beta-glucosidase YP_001365399.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sbl:Sbal_1133 beta-glucosidase YP_001365400.1 catalyzes phosphorylation of fructose; cytosolic enzyme YP_001365401.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: shw:Sputw3181_3061 methyl-accepting chemotaxis sensory transducer YP_001365402.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: sbl:Sbal_1144 RNA polymerase, sigma 70 subunit, RpoD family YP_001365403.1 TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase DnaG DnaB-binding; DNA primase catalytic core domain; SMART: Toprim sub domain protein; KEGG: sbl:Sbal_1145 DNA primase YP_001365404.1 PFAM: GatB/Yqey domain protein; KEGG: sbl:Sbal_1146 GatB/YqeY domain protein YP_001365405.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001365406.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001365407.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX YP_001365408.1 TIGRFAM: dihydroneopterin aldolase; KEGG: sbl:Sbal_1150 dihydroneopterin aldolase YP_001365409.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: sbl:Sbal_1151 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_001365410.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell YP_001365411.1 KEGG: sbl:Sbal_1153 ribosomal RNA large subunit methyltransferase A, putative YP_001365412.1 KEGG: sbl:Sbal_1154 major outer membrane lipoprotein, putative YP_001365413.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: sbl:Sbal_1155 metal dependent phosphohydrolase YP_001365414.1 PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: sbl:Sbal_1156 peptidoglycan-binding domain 1 protein YP_001365415.1 KEGG: sbl:Sbal_1157 general secretion pathway protein B YP_001365416.1 PFAM: Citrate transporter; KEGG: sbl:Sbal_1158 citrate transporter YP_001365417.1 KEGG: shn:Shewana3_3072 hypothetical protein YP_001365418.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway YP_001365419.1 Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate YP_001365420.1 PFAM: Chloride channel core; KEGG: sbl:Sbal_1161 Cl-channel, voltage-gated family protein YP_001365421.1 KEGG: sbl:Sbal_1162 hypothetical protein YP_001365422.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors YP_001365423.1 KEGG: sbl:Sbal_1165 hypothetical protein YP_001365424.1 KEGG: sbl:Sbal_1166 hypothetical protein YP_001365425.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure YP_001365426.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_001365427.1 PFAM: peptidase M23B; Opacity-associated protein A domain protein; KEGG: sbl:Sbal_1169 peptidase M23B YP_001365428.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_001365429.1 KEGG: sbl:Sbal_1171 hypothetical protein YP_001365430.1 KEGG: sbl:Sbal_1172 hypothetical protein YP_001365431.1 PFAM: protein of unknown function UPF0126; KEGG: sbl:Sbal_1173 protein of unknown function UPF0126 YP_001365432.1 KEGG: sbl:Sbal_1174 hypothetical protein YP_001365433.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: shn:Shewana3_3053 cobalamin biosynthesis protein CbiB YP_001365434.1 PFAM: purine or other phosphorylase family 1; KEGG: sbl:Sbal_1176 adenosylhomocysteine nucleosidase YP_001365435.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001365436.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate YP_001365437.1 TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sbl:Sbal_1179 conserved hypothetical radical SAM protein YP_001365438.1 PFAM: Hpt domain protein; KEGG: sbl:Sbal_1180 Hpt protein YP_001365439.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_1181 transcriptional regulator, LysR family YP_001365440.1 KEGG: sbl:Sbal_1182 putative adenylate/guanylate cyclase YP_001365441.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair YP_001365442.1 hydrolyzes diadenosine polyphosphate YP_001365443.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: sbl:Sbal_1185 PTSINtr with GAF domain, PtsP YP_001365444.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_1186 protein of unknown function DUF81 YP_001365445.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_001365446.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived YP_001365447.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH YP_001365448.1 KEGG: sbl:Sbal_1190 hypothetical protein YP_001365449.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC YP_001365450.1 PFAM: protein of unknown function DUF339; KEGG: sbl:Sbal_1192 protein of unknown function DUF339 YP_001365451.1 KEGG: sbl:Sbal_1193 hypothetical protein YP_001365452.1 catalyzes the formation of oxaloacetate from L-aspartate YP_001365453.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response YP_001365454.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: sbl:Sbal_1196 anti sigma-E protein, RseA YP_001365455.1 PFAM: MucB/RseB family protein; KEGG: sbl:Sbal_1197 sigma E regulatory protein, MucB/RseB YP_001365456.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: sbl:Sbal_1198 positive regulator of sigma E, RseC/MucC YP_001365457.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001365458.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: sbl:Sbal_1200 signal peptidase I YP_001365459.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity YP_001365460.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_001365461.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: sbl:Sbal_1203 DNA repair protein RecO YP_001365462.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001365463.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001365464.1 PFAM: protein of unknown function DUF962; KEGG: sbl:Sbal_1206 protein of unknown function DUF962 YP_001365465.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: sbl:Sbal_1207 protein of unknown function DUF21 YP_001365466.1 PFAM: cytochrome c assembly protein; KEGG: sbl:Sbal_1208 cytochrome c assembly protein YP_001365467.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins YP_001365468.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001365469.1 Essential for efficient processing of 16S rRNA YP_001365470.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_001365471.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001365472.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive YP_001365473.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis YP_001365474.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_001365475.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sbl:Sbal_1217 oxidoreductase FAD-binding domain protein YP_001365476.1 KEGG: sbl:Sbal_1218 hypothetical protein YP_001365477.1 PFAM: sodium/hydrogen exchanger; KEGG: sbl:Sbal_1219 sodium/hydrogen exchanger YP_001365478.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; KEGG: sbl:Sbal_1220 chorismate mutase YP_001365479.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sbl:Sbal_1221 sigma 54 modulation protein/ribosomal protein S30EA YP_001365480.1 PFAM: cytochrome B561; KEGG: sbl:Sbal_1222 cytochrome b561 YP_001365481.1 PFAM: cytochrome c class II; KEGG: sbl:Sbal_1223 cytochrome c, class II YP_001365482.1 TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: sbl:Sbal_1224 Trp operon repressor YP_001365483.1 KEGG: sbl:Sbal_1225 hypothetical protein YP_001365484.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_1226 peptidylprolyl isomerase, FKBP-type YP_001365485.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways YP_001365486.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate YP_001365487.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_001365488.1 KEGG: sbl:Sbal_1230 hypothetical protein YP_001365489.1 PFAM: extracellular solute-binding protein family 3; KEGG: sbl:Sbal_1231 extracellular solute-binding protein, family 3 YP_001365490.1 PFAM: peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: sbl:Sbal_1232 peptidase S41 YP_001365491.1 PFAM: OsmC family protein; KEGG: sbl:Sbal_1234 OsmC family protein YP_001365492.1 KEGG: sbl:Sbal_1235 hypothetical protein YP_001365493.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sbl:Sbal_1236 PepSY-associated TM helix domain protein YP_001365494.1 KEGG: sbl:Sbal_1237 hypothetical protein YP_001365495.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein; KEGG: sbl:Sbal_1238 methyl-accepting chemotaxis sensory transducer YP_001365496.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sbl:Sbal_1239 sigma 54 modulation protein/ribosomal protein S30EA YP_001365497.1 KEGG: sbl:Sbal_1240 putative transmembrane protein YP_001365498.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sbl:Sbal_1241 two component transcriptional regulator, LuxR family YP_001365499.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sbl:Sbal_1242 integral membrane sensor signal transduction histidine kinase YP_001365500.1 KEGG: sbl:Sbal_1243 hypothetical protein YP_001365501.1 PFAM: Carotenoid oxygenase; KEGG: sbl:Sbal_1244 carotenoid oxygenase YP_001365502.1 PFAM: protein of unknown function DUF28; KEGG: sbl:Sbal_1245 protein of unknown function DUF28 YP_001365503.1 PFAM: chemotaxis sensory transducer; KEGG: sbl:Sbal_1246 methyl-accepting chemotaxis sensory transducer YP_001365504.1 TIGRFAM: Conserved hypothetical protein CHP02922; KEGG: sbl:Sbal_1247 hypothetical protein YP_001365505.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_1248 transcriptional regulator, TetR family YP_001365506.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sbl:Sbal_1249 NADH:flavin oxidoreductase/NADH oxidase YP_001365507.1 KEGG: sbl:Sbal_1250 peptidase S16, lon domain protein YP_001365508.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_1251 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001365509.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1252 DEAD/DEAH box helicase domain protein YP_001365510.1 KEGG: sbl:Sbal_1255 hypothetical protein YP_001365511.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001365512.1 PFAM: cyclase/dehydrase; KEGG: sbl:Sbal_1308 cyclase/dehydrase YP_001365513.1 PFAM: protein of unknown function UPF0125; KEGG: sbl:Sbal_1309 protein of unknown function UPF0125 YP_001365514.1 PFAM: SmpA/OmlA domain protein; KEGG: sbl:Sbal_1310 SmpA/OmlA domain protein YP_001365515.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sbl:Sbal_1311 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001365516.1 KEGG: sbl:Sbal_1312 hypothetical protein YP_001365517.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1313 diguanylate cyclase YP_001365518.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: sbl:Sbal_1314 potassium efflux system protein YP_001365519.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1315 TonB-dependent receptor, plug YP_001365520.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_001365521.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: sbl:Sbal_1317 isocitrate lyase YP_001365522.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_1318 thioesterase superfamily protein YP_001365523.1 KEGG: sbl:Sbal_1319 hypothetical protein YP_001365524.1 KEGG: sbl:Sbal_1320 hypothetical protein YP_001365525.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sbl:Sbal_1321 iron-containing alcohol dehydrogenase YP_001365526.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes YP_001365527.1 catalyzes the formation of betaine from betaine aldehyde YP_001365528.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine YP_001365529.1 KEGG: sbl:Sbal_1326 putative transporter, BCCT family protein YP_001365530.1 KEGG: sbl:Sbal_1327 hypothetical protein YP_001365531.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_1328 transcriptional regulator, MarR family YP_001365532.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sbl:Sbal_1329 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001365533.1 TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; KEGG: sbl:Sbal_1330 4-alpha-glucanotransferase YP_001365534.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain YP_001365535.1 TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sbl:Sbal_1332 glycogen debranching enzyme GlgX YP_001365536.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; KEGG: sbl:Sbal_1333 glycogen/starch/alpha-glucan phosphorylase YP_001365537.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate YP_001365538.1 PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: sbl:Sbal_1335 starch synthase YP_001365539.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_1336 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001365540.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1337 DEAD/DEAH box helicase domain protein YP_001365541.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sbl:Sbal_1338 cobalamin synthesis protein, P47K YP_001365542.1 SMART: extracellular solute-binding protein family 3; KEGG: sbl:Sbal_1339 extracellular solute-binding protein, family 3 YP_001365543.1 KEGG: sbl:Sbal_1340 hypothetical protein YP_001365544.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1341 major facilitator superfamily MFS_1 YP_001365545.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: sbl:Sbal_1342 multi antimicrobial extrusion protein MatE YP_001365546.1 KEGG: sbl:Sbal_1343 hypothetical protein YP_001365548.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: spc:Sputcn32_1267 AAA ATPase, central domain protein YP_001365549.1 PFAM: protein of unknown function DUF162; KEGG: sbl:Sbal_1350 protein of unknown function DUF162 YP_001365550.1 PFAM: protein of unknown function DUF162; KEGG: sbl:Sbal_1351 protein of unknown function DUF162 YP_001365551.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sbl:Sbal_1352 protein of unknown function DUF224, cysteine-rich region domain protein YP_001365552.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: sbl:Sbal_1353 FAD linked oxidase domain protein YP_001365553.1 PFAM: L-lactate permease; KEGG: sbl:Sbal_1354 L-lactate permease YP_001365554.1 catalyzes the phosphorylation of NAD to NADP YP_001365555.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor YP_001365556.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001365557.1 PFAM: Polyprenyl synthetase; KEGG: sbl:Sbal_1358 polyprenyl synthetase YP_001365558.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: sbl:Sbal_1359 exodeoxyribonuclease VII, small subunit YP_001365559.1 Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. YP_001365560.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella YP_001365561.1 Required for the synthesis of the thiazole moiety YP_001365562.1 KEGG: sbl:Sbal_1363 hypothetical protein YP_001365563.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence YP_001365564.1 KEGG: sbl:Sbal_1365 hypothetical protein YP_001365565.1 PFAM: protein of unknown function DUF423; KEGG: sbl:Sbal_1366 protein of unknown function DUF423 YP_001365566.1 KEGG: sbl:Sbal_1367 hypothetical protein YP_001365567.1 catalyzes the formation of 2-oxoglutarate from isocitrate YP_001365568.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sbl:Sbal_1369 peptidase S9, prolyl oligopeptidase active site domain protein YP_001365569.1 KEGG: sbl:Sbal_1370 hypothetical protein YP_001365570.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups YP_001365571.1 PFAM: conserved hypothetical protein 730; KEGG: sbl:Sbal_1372 conserved hypothetical protein 730 YP_001365572.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1373 diguanylate cyclase YP_001365573.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_1374 TPR repeat-containing protein YP_001365574.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: sbl:Sbal_1375 peptidase M61 domain protein YP_001365575.1 Required for efficient pilin antigenic variation YP_001365576.1 PFAM: porin Gram-negative type; KEGG: sbl:Sbal_1377 porin, gram-negative type YP_001365577.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_1378 two component transcriptional regulator, winged helix family YP_001365578.1 KEGG: sbl:Sbal_1379 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: Phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001365579.1 TIGRFAM: phosphate binding protein; KEGG: sbl:Sbal_1380 phosphate binding protein YP_001365580.1 PFAM: Peptidase M1 membrane alanine aminopeptidase ; Leukotriene A4 hydrolase; KEGG: sbl:Sbal_1383 peptidase M1, membrane alanine aminopeptidase YP_001365581.1 PFAM: glutathione peroxidase; KEGG: sbl:Sbal_1384 glutathione peroxidase YP_001365582.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: sbl:Sbal_1385 magnesium transporter YP_001365583.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1386 GCN5-related N-acetyltransferase YP_001365584.1 PFAM: YfaZ family protein; KEGG: sbl:Sbal_1387 YfaZ family protein YP_001365585.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_1388 protein of unknown function DUF6, transmembrane YP_001365586.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: sbl:Sbal_1389 diguanylate cyclase YP_001365587.1 KEGG: sbl:Sbal_1390 hypothetical protein YP_001365588.1 KEGG: sbl:Sbal_1391 hypothetical protein YP_001365589.1 PFAM: Fmu (Sun) domain protein; KEGG: sbl:Sbal_1392 Fmu (Sun) domain protein YP_001365590.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_1393 glutathione S-transferase, N-terminal domain YP_001365591.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_1394 glutathione S-transferase, N-terminal domain YP_001365592.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_1395 transcriptional regulator, TetR family YP_001365593.1 KEGG: sbl:Sbal_1396 hypothetical protein YP_001365594.1 TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1397 TonB-dependent heme/hemoglobin receptor family protein YP_001365595.1 PFAM: PhnA protein; KEGG: sbl:Sbal_1398 PhnA protein-like protein YP_001365596.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1399 major facilitator superfamily MFS_1 YP_001365597.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_1400 transcriptional regulator, MarR family YP_001365598.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sbl:Sbal_1401 succinylglutamate desuccinylase/aspartoacylase YP_001365599.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_1402 methyl-accepting chemotaxis sensory transducer YP_001365600.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sbl:Sbal_1403 fumarylacetoacetate (FAA) hydrolase YP_001365601.1 PFAM: cyclic nucleotide-binding; KEGG: son:SO1586 hypothetical cyclic nucleotide-binding domain protein YP_001365602.1 KEGG: son:SO1587 hypothetical protein YP_001365603.1 KEGG: sbl:Sbal_1404 hypothetical protein YP_001365604.1 PFAM: protein of unknown function DUF134; KEGG: sfr:Sfri_0587 protein of unknown function DUF134 YP_001365605.1 PFAM: ferric-uptake regulator; KEGG: sfr:Sfri_0586 ferric uptake regulator, Fur family protein YP_001365606.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfr:Sfri_0585 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001365607.1 PFAM: Rhodanese domain protein; KEGG: sfr:Sfri_0585 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001365608.1 PFAM: thioesterase superfamily protein; KEGG: sfr:Sfri_0584 thioesterase superfamily protein YP_001365609.1 PFAM: glycoside hydrolase family 20; Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; KEGG: sbl:Sbal_1405 beta-N-acetylhexosaminidase YP_001365610.1 PFAM: ROK family protein; KEGG: sbl:Sbal_1406 ROK family protein YP_001365611.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1407 major facilitator superfamily MFS_1 YP_001365612.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_1408 helix-turn-helix-domain containing protein, AraC type YP_001365613.1 PFAM: tryptophan halogenase; KEGG: sbl:Sbal_1409 tryptophan halogenase YP_001365614.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1410 TonB-dependent receptor YP_001365615.1 PFAM: polysaccharide deacetylase; KEGG: sbl:Sbal_1411 polysaccharide deacetylase YP_001365616.1 KEGG: sbl:Sbal_1412 hypothetical protein YP_001365617.1 KEGG: sbl:Sbal_1413 hypothetical protein YP_001365618.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: sbl:Sbal_1415 transport-associated YP_001365619.1 KEGG: sbl:Sbal_1416 hypothetical protein YP_001365620.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_1417 sigma54 specific transcriptional regulator, fis family YP_001365621.1 KEGG: sbl:Sbal_1418 hypothetical protein YP_001365622.1 KEGG: sbl:Sbal_1418 hypothetical protein YP_001365623.1 KEGG: son:SO1592 hypothetical protein YP_001365624.1 PFAM: Dual specificity protein phosphatase; diacylglycerol kinase catalytic region; KEGG: sbl:Sbal_1419 diacylglycerol kinase, catalytic region YP_001365625.1 KEGG: sbl:Sbal_1420 hypothetical protein YP_001365626.1 PFAM: protein of unknown function DUF1328; KEGG: shm:Shewmr7_2739 protein of unknown function DUF1328 YP_001365627.1 PFAM: helix-turn-helix domain protein; KEGG: shn:Shewana3_2845 hypothetical protein YP_001365628.1 KEGG: shn:Shewana3_2844 hypothetical protein YP_001365629.1 TIGRFAM: PfaD family protein; KEGG: sbl:Sbal_1422 2-nitropropane dioxygenase, NPD YP_001365630.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: sbl:Sbal_1423 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_001365631.1 TIGRFAM: PfaB family protein; KEGG: sbl:Sbal_1424 omega-3 polyunsaturated fatty acid synthase PfaB YP_001365632.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: sbl:Sbal_1425 beta-ketoacyl synthase YP_001365633.1 KEGG: sbl:Sbal_1426 transcriptional regulator, putative YP_001365634.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sbl:Sbal_1427 4'-phosphopantetheinyl transferase YP_001365635.1 KEGG: sbl:Sbal_1428 lipoprotein, putative YP_001365636.1 PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_1429 beta-lactamase domain protein YP_001365637.1 PFAM: regulatory protein LysR; KEGG: sbl:Sbal_1430 transcriptional regulator, LysR family YP_001365638.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis YP_001365639.1 putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function YP_001365640.1 KEGG: sbl:Sbal_1433 hypothetical protein YP_001365641.1 KEGG: sbl:Sbal_1434 hypothetical protein YP_001365642.1 KEGG: sbl:Sbal_1435 hypothetical protein YP_001365643.1 KEGG: sbl:Sbal_1436 hypothetical protein YP_001365644.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1437 GCN5-related N-acetyltransferase YP_001365645.1 KEGG: sbl:Sbal_1438 hypothetical protein YP_001365646.1 KEGG: sbl:Sbal_1439 hypothetical protein YP_001365647.1 KEGG: sbl:Sbal_1440 hypothetical protein YP_001365648.1 PFAM: protein of unknown function DUF446; KEGG: sbl:Sbal_1441 protein of unknown function DUF446 YP_001365649.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_1442 pseudouridylate synthase YP_001365650.1 KEGG: shw:Sputw3181_2763 hypothetical protein YP_001365651.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group YP_001365652.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS EIIB protein; phosphotransferase system EIIC; KEGG: sbl:Sbal_1444 PTS system, glucose-like IIB subunint YP_001365653.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_001365654.1 PFAM: CBS domain containing protein; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_1446 metal dependent phosphohydrolase YP_001365655.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway YP_001365656.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_001365657.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn YP_001365658.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_001365659.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001365660.1 Catalyzes the phosphorylation of UMP to UDP YP_001365661.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001365662.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: sbl:Sbal_1454 undecaprenyl diphosphate synthase YP_001365663.1 PFAM: phosphatidate cytidylyltransferase; KEGG: sbl:Sbal_1455 phosphatidate cytidylyltransferase YP_001365664.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001365665.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: sbl:Sbal_1457 putative membrane-associated zinc metalloprotease YP_001365666.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: shm:Shewmr7_2700 surface antigen (D15) YP_001365667.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: sbl:Sbal_1459 outer membrane chaperone Skp (OmpH) YP_001365668.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_001365669.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_001365670.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_001365671.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_001365672.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001365673.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_001365674.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: sbl:Sbal_1466 transcriptional regulator, fis family YP_001365675.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1467 diguanylate cyclase YP_001365676.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: sbl:Sbal_1468 potassium efflux system protein YP_001365677.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sbl:Sbal_1469 putative cold-shock DNA-binding domain protein YP_001365678.1 PFAM: protein of unknown function DUF885; KEGG: sbl:Sbal_1470 protein of unknown function DUF885 YP_001365679.1 PFAM: SNF2-related protein; helicase domain protein; zinc finger SWIM domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1471 SNF2-related protein YP_001365680.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sbl:Sbal_1472 PHP C-terminal domain protein YP_001365681.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: sbl:Sbal_1473 dTDP-4-dehydrorhamnose reductase YP_001365682.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: sbl:Sbal_1474 3'(2'),5'-bisphosphate nucleotidase YP_001365683.1 catalyzes phosphorylation of fructose; cytosolic enzyme YP_001365684.1 PFAM: protein of unknown function DUF218; KEGG: sbl:Sbal_1476 protein of unknown function DUF218 YP_001365685.1 KEGG: sbl:Sbal_1477 hypothetical protein YP_001365686.1 KEGG: sbl:Sbal_1478 decaheme cytochrome c YP_001365687.1 PFAM: regulatory protein LysR; KEGG: sbl:Sbal_1479 transcriptional regulator, LysR family YP_001365688.1 PFAM: protein of unknown function DUF583; KEGG: sbl:Sbal_1480 protein of unknown function DUF583 YP_001365689.1 TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_1481 ferredoxin-type protein NapF YP_001365690.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sbl:Sbal_1482 UDP-glucose 4-epimerase YP_001365691.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sbl:Sbal_1483 UTP-glucose-1-phosphate uridylyltransferase GalU YP_001365692.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin YP_001365693.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction YP_001365694.1 PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_1486 transcriptional regulator, TyrR YP_001365695.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sbl:Sbal_1487 fumarylacetoacetate (FAA) hydrolase YP_001365696.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_1488 maleylacetoacetate isomerase YP_001365697.1 PFAM: protein of unknown function DUF925; KEGG: sbl:Sbal_1489 protein of unknown function DUF925 YP_001365698.1 receptor for colicin S4 YP_001365699.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_1491 short-chain dehydrogenase/reductase SDR YP_001365700.1 KEGG: sbl:Sbal_1492 hypothetical protein YP_001365701.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis YP_001365702.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: sbl:Sbal_1495 acetyl-CoA acetyltransferase YP_001365703.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_1496 methylmalonate-semialdehyde dehydrogenase YP_001365704.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: shw:Sputw3181_2702 acyl-CoA dehydrogenase domain protein YP_001365705.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001365706.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sbl:Sbal_1499 enoyl-CoA hydratase/isomerase YP_001365707.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sbl:Sbal_1500 3-hydroxyisobutyrate dehydrogenase YP_001365708.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001365709.1 KEGG: sbl:Sbal_1502 hypothetical protein YP_001365710.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sbl:Sbal_1503 peptidase S9, prolyl oligopeptidase active site domain protein YP_001365711.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sbl:Sbal_1504 putative transcriptional regulator, MerR family YP_001365712.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sbl:Sbal_1505 copper-translocating P-type ATPase YP_001365713.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_1506 ABC transporter related YP_001365714.1 PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: sbl:Sbal_1507 lipocalin family protein YP_001365715.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: shn:Shewana3_2759 protein of unknown function DUF6, transmembrane YP_001365716.1 PFAM: FAD linked oxidase domain protein; KEGG: sbl:Sbal_1510 FAD linked oxidase domain protein YP_001365717.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1513 diguanylate cyclase with PAS/PAC sensor YP_001365718.1 PFAM: Domain of unknown function DUF1888; KEGG: shm:Shewmr7_2648 hypothetical protein YP_001365719.1 PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: sbl:Sbal_1517 transcriptional regulator, CadC YP_001365720.1 KEGG: sbl:Sbal_1518 hypothetical protein YP_001365721.1 KEGG: sbl:Sbal_1519 hypothetical protein YP_001365722.1 KEGG: sbl:Sbal_1520 hypothetical protein YP_001365723.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_1521 transcriptional regulator, TetR family YP_001365724.1 PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_1522 secretion protein HlyD family protein YP_001365725.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_1523 ABC transporter related YP_001365726.1 PFAM: ABC-2 type transporter; KEGG: sbl:Sbal_1524 ABC-2 type transporter YP_001365727.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: sbl:Sbal_1525 signal peptidase I YP_001365728.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: sbl:Sbal_1526 acetyl-CoA hydrolase/transferase YP_001365729.1 KEGG: sbl:Sbal_1527 hypothetical protein YP_001365730.1 PFAM: beta-lactamase; KEGG: sbl:Sbal_1528 beta-lactamase YP_001365731.1 KEGG: rme:Rmet_5702 hypothetical protein YP_001365732.1 KEGG: rme:Rmet_5701 hypothetical protein YP_001365733.1 KEGG: rme:Rmet_5700 hypothetical protein YP_001365734.1 KEGG: dps:DP0590 periplasmic protein YP_001365735.1 KEGG: cje:Cj0092 putative periplasmic protein YP_001365736.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical transposase, IS110 family YP_001365737.1 PFAM: protein of unknown function DUF1415; KEGG: sbl:Sbal_1530 protein of unknown function DUF1415 YP_001365738.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_1531 lysine exporter protein (LysE/YggA) YP_001365739.1 KEGG: sbl:Sbal_1532 hypothetical protein YP_001365740.1 KEGG: sbl:Sbal_1533 hypothetical protein YP_001365741.1 PFAM: putative esterase; KEGG: shn:Shewana3_2737 putative esterase YP_001365742.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: she:Shewmr4_2562 protein of unknown function DUF6, transmembrane YP_001365743.1 PFAM: amino acid-binding ACT domain protein; KEGG: sbl:Sbal_1537 amino acid-binding ACT domain protein YP_001365744.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_1538 binding-protein-dependent transport systems inner membrane component YP_001365745.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_1539 phosphate ABC transporter, inner membrane subunit PstA YP_001365746.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation YP_001365747.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon YP_001365750.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_1544 glyoxalase/bleomycin resistance protein/dioxygenase YP_001365751.1 KEGG: sbl:Sbal_1545 hypothetical protein YP_001365752.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: sbl:Sbal_1546 choline/carnitine/betaine transporter YP_001365753.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sbl:Sbal_1547 HNH endonuclease YP_001365754.1 PFAM: protein of unknown function DUF1289; KEGG: sbl:Sbal_1548 protein of unknown function DUF1289 YP_001365755.1 KEGG: sbl:Sbal_1549 hypothetical protein YP_001365756.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_001365757.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_1551 alpha/beta hydrolase fold YP_001365758.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis YP_001365759.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: sbl:Sbal_1553 3-beta hydroxysteroid dehydrogenase/isomerase YP_001365760.1 KEGG: sbl:Sbal_1554 hypothetical protein YP_001365761.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: sbl:Sbal_1555 amino acid/peptide transporter YP_001365762.1 KEGG: sbl:Sbal_1556 hypothetical protein YP_001365763.1 PFAM: Integral membrane protein TerC; KEGG: sbl:Sbal_1557 integral membrane protein TerC YP_001365764.1 KEGG: sbl:Sbal_1558 hypothetical protein YP_001365765.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: sbl:Sbal_1561 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_001365766.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_1562 glyoxalase/bleomycin resistance protein/dioxygenase YP_001365767.1 PFAM: transcription activator effector binding; KEGG: sbl:Sbal_1563 transcription activator, effector binding YP_001365768.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: sbl:Sbal_1564 helix-turn-helix, type 11 domain protein YP_001365769.1 PFAM: Aerolysin/hemolysin/leukocidin toxin; KEGG: sbl:Sbal_1565 aerolysin/hemolysin/leukocidin toxin YP_001365770.1 PFAM: branched-chain amino acid transport; KEGG: shw:Sputw3181_2644 branched-chain amino acid transport YP_001365771.1 PFAM: AzlC family protein; KEGG: sbl:Sbal_1567 AzlC family protein YP_001365772.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sbl:Sbal_1568 transcriptional regulator, AraC family YP_001365773.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sbl:Sbal_1569 transferase hexapeptide repeat containing protein YP_001365774.1 KEGG: sbl:Sbal_1570 hypothetical protein YP_001365775.1 KEGG: shw:Sputw3181_2636 hypothetical protein YP_001365776.1 KEGG: shw:Sputw3181_2635 hypothetical protein YP_001365777.1 SMART: AAA ATPase; KEGG: pmu:PM0282 EA59 gene protein, phage lambda YP_001365778.1 KEGG: pst:PSPTO_3690 hypothetical protein YP_001365779.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: sbl:Sbal_1574 pyridoxal-dependent decarboxylase YP_001365780.1 PFAM: glycerate kinase; KEGG: sbl:Sbal_1575 glycerate kinase YP_001365781.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: sbl:Sbal_1576 gluconate transporter YP_001365782.1 PFAM: Catalase domain protein; KEGG: sbl:Sbal_1577 catalase domain protein YP_001365783.1 PFAM: sugar diacid recognition domain protein; KEGG: she:Shewmr4_2516 transcriptional regulator, CdaR YP_001365784.1 KEGG: sbl:Sbal_1585 phage SPO1 DNA polymerase domain protein YP_001365785.1 KEGG: sbl:Sbal_1586 hypothetical protein YP_001365786.1 KEGG: sbl:Sbal_1587 outer membrane protein precursor MtrB YP_001365787.1 TIGRFAM: cytochrome C family protein; KEGG: sbl:Sbal_1588 cytochrome c family protein YP_001365788.1 KEGG: sbl:Sbal_1589 decaheme cytochrome c YP_001365789.1 KEGG: sbl:Sbal_1590 decaheme cytochrome c YP_001365790.1 KEGG: sbl:Sbal_1591 decaheme cytochrome c MtrF YP_001365791.1 KEGG: sbl:Sbal_1592 outer membrane protein, putative YP_001365792.1 TIGRFAM: cytochrome C family protein; KEGG: sbl:Sbal_1593 cytochrome c family protein YP_001365793.1 PFAM: FeoA family protein; KEGG: sbl:Sbal_1594 FeoA family protein YP_001365794.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: sbl:Sbal_1595 ferrous iron transport protein B YP_001365795.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001365796.1 PFAM: protein of unknown function DUF1282; KEGG: sbl:Sbal_1597 protein of unknown function DUF1282 YP_001365797.1 PFAM: tRNA--hydroxylase; KEGG: sbl:Sbal_1598 tRNA--hydroxylase YP_001365798.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine YP_001365799.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sbl:Sbal_1600 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001365800.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001365801.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate YP_001365802.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001365803.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001365804.1 binds and unfolds substrates as part of the ClpXP protease YP_001365805.1 KEGG: sbl:Sbal_1606 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001365806.1 PFAM: histone family protein DNA-binding protein; KEGG: shw:Sputw3181_2608 histone family protein DNA-binding protein YP_001365807.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sbl:Sbal_1608 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001365808.1 PFAM: TOBE domain protein; KEGG: sbl:Sbal_1609 TOBE domain protein YP_001365809.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity YP_001365810.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_1611 ABC transporter related YP_001365811.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sbl:Sbal_1612 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_001365812.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_1613 binding-protein-dependent transport systems inner membrane component YP_001365813.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_1614 binding-protein-dependent transport systems inner membrane component YP_001365814.1 PFAM: extracellular solute-binding protein family 5; KEGG: sbl:Sbal_1615 extracellular solute-binding protein, family 5 YP_001365815.1 TIGRFAM: Transcriptional activator PspF; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_1616 transcriptional regulator, fis family YP_001365816.1 TIGRFAM: Phage shock protein A; PFAM: PspA/IM30 family protein; KEGG: sbl:Sbal_1617 phage shock protein A, PspA YP_001365817.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding YP_001365818.1 TIGRFAM: Phage shock protein C; PFAM: PspC domain protein; KEGG: shw:Sputw3181_2597 phage shock protein C, PspC YP_001365819.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: sbl:Sbal_1620 protein of unknown function DUF463, YcjX family protein YP_001365820.1 PFAM: conserved hypothetical protein 1620; KEGG: sbl:Sbal_1621 conserved hypothetical protein 1620 YP_001365821.1 TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sbl:Sbal_1622 methionine gamma-lyase YP_001365822.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: sbl:Sbal_1623 competence protein ComEA helix-hairpin-helix repeat protein YP_001365823.1 KEGG: sbl:Sbal_1624 hypothetical protein YP_001365824.1 PFAM: histone deacetylase superfamily; KEGG: sbl:Sbal_1625 histone deacetylase superfamily YP_001365825.1 KEGG: sbl:Sbal_1626 hypothetical protein YP_001365826.1 KEGG: sbl:Sbal_1627 primosomal replication protein N'', putative YP_001365827.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_1628 protein of unknown function DUF81 YP_001365828.1 helicase involved in DNA repair and perhaps also replication YP_001365829.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C YP_001365830.1 PFAM: porin Gram-negative type; KEGG: sbl:Sbal_1631 porin, gram-negative type YP_001365831.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: son:SO1822 TonB-dependent receptor, putative YP_001365832.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: son:SO1822 TonB-dependent receptor, putative YP_001365833.1 KEGG: sbl:Sbal_1640 hypothetical protein YP_001365834.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbl:Sbal_1641 MotA/TolQ/ExbB proton channel YP_001365835.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbl:Sbal_1642 MotA/TolQ/ExbB proton channel YP_001365836.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbl:Sbal_1643 biopolymer transport protein ExbD/TolR YP_001365837.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sbl:Sbal_1644 TonB family protein YP_001365838.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_1645 TPR repeat-containing protein YP_001365839.1 PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1646 diguanylate cyclase YP_001365840.1 PFAM: protein of unknown function DUF885; KEGG: sbl:Sbal_1647 protein of unknown function DUF885 YP_001365841.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sbl:Sbal_1648 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001365842.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1649 GCN5-related N-acetyltransferase YP_001365843.1 KEGG: sbl:Sbal_1650 RNA-binding S4 domain protein YP_001365844.1 PFAM: protein of unknown function DUF1260; KEGG: sbl:Sbal_1651 protein of unknown function DUF1260 YP_001365845.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_1652 transcriptional regulator, LysR family YP_001365846.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_1653 protein of unknown function DUF81 YP_001365847.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: sbl:Sbal_1654 nuclease SbcCD, D subunit YP_001365848.1 PFAM: SMC domain protein; KEGG: sbl:Sbal_1655 SMC domain protein YP_001365849.1 PFAM: peptidase M23B; KEGG: sbl:Sbal_1656 peptidase M23B YP_001365850.1 KEGG: sbl:Sbal_1657 hypothetical protein YP_001365851.1 PFAM: protein of unknown function DUF45; KEGG: sbl:Sbal_1658 protein of unknown function DUF45 YP_001365852.1 KEGG: sbl:Sbal_1659 hypothetical protein YP_001365853.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1660 DEAD/DEAH box helicase domain protein YP_001365854.1 PFAM: Patatin; KEGG: sbl:Sbal_1661 patatin YP_001365855.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sbl:Sbal_1662 alcohol dehydrogenase, zinc-binding domain protein YP_001365856.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_1663 transcriptional regulator, MarR family YP_001365857.1 KEGG: sbl:Sbal_1664 hypothetical protein YP_001365858.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_001365859.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions YP_001365860.1 KEGG: sbl:Sbal_1667 hypothetical protein YP_001365861.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate YP_001365862.1 KEGG: sbl:Sbal_1669 hypothetical protein YP_001365863.1 KEGG: sbl:Sbal_1670 hypothetical protein YP_001365864.1 KEGG: sbl:Sbal_1671 hypothetical protein YP_001365865.1 PFAM: carbon starvation protein CstA; KEGG: shw:Sputw3181_2552 carbon starvation protein CstA YP_001365866.1 unknown function; when overproduced it confers drug-resistance YP_001365867.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: sbl:Sbal_1674 signal transduction histidine kinase, LytS YP_001365868.1 KEGG: sbl:Sbal_1675 hypothetical protein YP_001365869.1 KEGG: sbl:Sbal_1676 RepA domain protein YP_001365870.1 KEGG: sbl:Sbal_1677 hypothetical protein YP_001365871.1 PFAM: type IV pilus assembly PilZ; KEGG: sbl:Sbal_1678 type IV pilus assembly PilZ YP_001365872.1 PFAM: phosphate-starvation-inducible E; KEGG: sbl:Sbal_1679 phosphate-starvation-inducible E YP_001365873.1 PFAM: NnrS family protein; KEGG: sbl:Sbal_1680 NnrS family protein YP_001365874.1 KEGG: sbl:Sbal_1681 hypothetical protein YP_001365875.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sbl:Sbal_1682 DNA internalization-related competence protein ComEC/Rec2 YP_001365876.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_1683 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_001365877.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate YP_001365878.1 PFAM: protein of unknown function DUF343; KEGG: sbl:Sbal_1685 protein of unknown function DUF343 YP_001365879.1 KEGG: sbl:Sbal_1686 lipoprotein, putative YP_001365880.1 KEGG: sbl:Sbal_1687 hypothetical protein YP_001365881.1 PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: sbl:Sbal_1688 glutaredoxin YP_001365882.1 PFAM: protein of unknown function DUF748; KEGG: sbl:Sbal_1689 protein of unknown function DUF748 YP_001365883.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_1690 glyoxalase/bleomycin resistance protein/dioxygenase YP_001365884.1 KEGG: sbl:Sbal_1691 hypothetical protein YP_001365885.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_1692 glyoxalase/bleomycin resistance protein/dioxygenase YP_001365886.1 PFAM: protein of unknown function DUF1289; KEGG: sbl:Sbal_1693 protein of unknown function DUF1289 YP_001365887.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis YP_001365888.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates YP_001365889.1 TIGRFAM: integron integrase; PFAM: phage integrase family protein; KEGG: son:SO2037 site-specific recombinase, phage integrase family YP_001365890.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO2036 site-specific recombinase, phage integrase family YP_001365891.1 PFAM: putative transposase; KEGG: shw:Sputw3181_1845 putative transposase YP_001365894.1 KEGG: hch:HCH_02017 hypothetical protein YP_001365895.1 KEGG: pat:Patl_2573 hypothetical protein YP_001365897.1 KEGG: sfr:Sfri_1660 hypothetical protein YP_001365901.1 KEGG: sdn:Sden_1136 transposase YP_001365902.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_1137 phage integrase YP_001365903.1 PFAM: conserved hypothetical protein CHP02464; KEGG: jan:Jann_2797 hypothetical protein YP_001365904.1 KEGG: eli:ELI_05495 hypothetical protein YP_001365906.1 KEGG: sfr:Sfri_1243 hypothetical protein YP_001365907.1 KEGG: cps:CPS_2741 hypothetical protein YP_001365908.1 KEGG: spc:Sputcn32_1464 hypothetical protein YP_001365909.1 KEGG: sbl:Sbal_1706 hypothetical protein YP_001365910.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth YP_001365911.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sbl:Sbal_1708 putative cold-shock DNA-binding domain protein YP_001365912.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sbl:Sbal_1709 sulphate transporter YP_001365913.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: sbl:Sbal_1710 ribonuclease, Rne/Rng family YP_001365914.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_1711 pseudouridine synthase, RluA family YP_001365915.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_1712 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001365916.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sbl:Sbal_1713 maf protein YP_001365917.1 PFAM: protein of unknown function DUF177; KEGG: sbl:Sbal_1714 protein of unknown function DUF177 YP_001365918.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001365919.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY YP_001365920.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_001365921.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: sbl:Sbal_1718 malonyl CoA-acyl carrier protein transacylase YP_001365922.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbl:Sbal_1719 3-oxoacyl-(acyl-carrier-protein) reductase YP_001365923.1 carries the fatty acid chain in fatty acid biosynthesis YP_001365924.1 PFAM: Beta-ketoacyl synthase; KEGG: sbl:Sbal_1721 beta-ketoacyl synthase YP_001365925.1 KEGG: sbl:Sbal_1722 hypothetical protein YP_001365926.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_1723 thioesterase superfamily protein YP_001365927.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sbl:Sbal_1724 6-phosphogluconate dehydrogenase, NAD-binding YP_001365928.1 PFAM: Aldose 1-epimerase; KEGG: sbl:Sbal_1725 aldose 1-epimerase YP_001365929.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sbl:Sbal_1726 acyl-CoA dehydrogenase domain protein YP_001365930.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1729 TonB-dependent siderophore receptor YP_001365931.1 PFAM: Patatin; KEGG: spc:Sputcn32_1591 patatin YP_001365932.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP YP_001365933.1 PFAM: peptidase M28; KEGG: sbl:Sbal_1732 peptidase M28 YP_001365934.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_1733 HAD-superfamily hydrolase, subfamily IIA YP_001365935.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_001365936.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001365937.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_001365938.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shn:Shewana3_2543 diguanylate cyclase YP_001365939.1 PFAM: Gluconate transporter; Citrate transporter; Na+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sbl:Sbal_1737 Na+/H+ antiporter NhaC YP_001365940.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbl:Sbal_1738 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001365941.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A) YP_001365942.1 PFAM: OmpA/MotB domain protein; KEGG: sbl:Sbal_1740 OmpA/MotB domain protein YP_001365943.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sbl:Sbal_1741 prolyl oligopeptidase YP_001365944.1 TIGRFAM: Pol-Pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_1742 4-hydroxybenzoyl-CoA thioesterase YP_001365945.1 TIGRFAM: Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbl:Sbal_1743 MotA/TolQ/ExbB proton channel YP_001365946.1 TIGRFAM: Biopolymer transport TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbl:Sbal_1744 biopolymer transport protein ExbD/TolR YP_001365947.1 TIGRFAM: Tol-Pal system TolA; PFAM: TolA family protein; KEGG: sbl:Sbal_1745 TolA family protein YP_001365948.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA YP_001365949.1 TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: sbl:Sbal_1747 OmpA domain protein YP_001365950.1 TIGRFAM: Tol-Pal system YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sbl:Sbal_1748 tetratricopeptide TPR_2 repeat protein YP_001365951.1 PFAM: porin; KEGG: sbl:Sbal_1749 porin YP_001365952.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase YP_001365953.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1751 type III restriction enzyme, res subunit YP_001365954.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001365955.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_1753 integral membrane sensor hybrid histidine kinase YP_001365956.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: sbl:Sbal_1757 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001365957.1 KEGG: sbl:Sbal_1758 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001365958.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: sbl:Sbal_1759 8-amino-7-oxononanoate synthase YP_001365959.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_1760 methyltransferase type 11 YP_001365960.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium YP_001365961.1 PFAM: histone family protein DNA-binding protein; KEGG: sbl:Sbal_1762 histone family protein DNA-binding protein YP_001365962.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_1763 ABC transporter related YP_001365963.1 KEGG: sbl:Sbal_1764 hypothetical protein YP_001365964.1 PFAM: protein of unknown function DUF480; KEGG: sbl:Sbal_1765 protein of unknown function DUF480 YP_001365965.1 KEGG: sbl:Sbal_1766 hypothetical protein YP_001365966.1 KEGG: sbl:Sbal_1767 hypothetical protein YP_001365967.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis YP_001365968.1 PFAM: S-adenosylmethionine decarboxylase; KEGG: sbl:Sbal_1769 adenosylmethionine decarboxylase YP_001365969.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate YP_001365970.1 PFAM: protein of unknown function DUF188; KEGG: sbl:Sbal_1771 protein of unknown function DUF188 YP_001365971.1 PFAM: YceI family protein; KEGG: sbl:Sbal_1772 YceI family protein YP_001365972.1 KEGG: sbl:Sbal_1773 hypothetical protein YP_001365973.1 KEGG: sbl:Sbal_1774 hypothetical protein YP_001365974.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_1775 multi-sensor signal transduction histidine kinase YP_001365975.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein YP_001365976.1 involved in regulation of intracellular pH under alkaline conditions YP_001365977.1 Multifunctional regulator of fatty acid metabolism YP_001365978.1 PFAM: SpoVR family protein; KEGG: sbl:Sbal_1779 SpoVR family protein YP_001365979.1 PFAM: protein of unknown function DUF444; KEGG: sbl:Sbal_1780 protein of unknown function DUF444 YP_001365980.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: sbl:Sbal_1781 putative serine protein kinase, PrkA YP_001365981.1 PFAM: manganese and iron superoxide dismutase; KEGG: sbl:Sbal_1782 superoxide dismutase YP_001365982.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: sbl:Sbal_1783 glutaredoxin-like protein YP_001365983.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sbl:Sbal_1784 uracil-xanthine permease YP_001365984.1 KEGG: sbl:Sbal_1785 hypothetical protein YP_001365985.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP YP_001365986.1 KEGG: sbl:Sbal_1787 hypothetical protein YP_001365987.1 KEGG: sbl:Sbal_1788 hypothetical protein YP_001365988.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sbl:Sbal_1789 arsenate reductase YP_001365989.1 PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: sbl:Sbal_1790 peptidase M48, Ste24p YP_001365990.1 PFAM: SirA family protein; KEGG: sbl:Sbal_1791 SirA family protein YP_001365991.1 PFAM: protein of unknown function UPF0118; KEGG: sbl:Sbal_1792 protein of unknown function UPF0118 YP_001365992.1 KEGG: sbl:Sbal_1793 cytochrome c3 YP_001365993.1 PFAM: cytochrome B561; KEGG: sbl:Sbal_1795 cytochrome b561 YP_001365994.1 PFAM: regulatory protein LuxR; KEGG: sbl:Sbal_1796 response regulator receiver protein YP_001365995.1 PFAM: peptidase M61 domain protein; KEGG: sbl:Sbal_1797 peptidase M61 domain protein YP_001365996.1 PFAM: histidine triad (HIT) protein; KEGG: sbl:Sbal_1798 histidine triad (HIT) protein YP_001365997.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_1799 thioesterase superfamily protein YP_001365998.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_1800 thioesterase superfamily protein YP_001365999.1 PFAM: protein of unknown function DUF1425; KEGG: sbl:Sbal_1801 protein of unknown function DUF1425 YP_001366000.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1802 TonB-dependent receptor YP_001366001.1 KEGG: sbl:Sbal_1803 hypothetical protein YP_001366002.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: sbl:Sbal_1804 nicotinamide mononucleotide transporter PnuC YP_001366003.1 PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: sbl:Sbal_1805 aminoglycoside phosphotransferase YP_001366004.1 KEGG: sbl:Sbal_1806 hypothetical protein YP_001366005.1 PFAM: DoxX family protein; KEGG: sbl:Sbal_1807 DoxX family protein YP_001366006.1 PFAM: nitroreductase; KEGG: sbl:Sbal_1808 nitroreductase YP_001366007.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1809 GCN5-related N-acetyltransferase YP_001366008.1 SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: sbl:Sbal_1810 prolyl 4-hydroxylase, alpha subunit YP_001366009.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1811 GCN5-related N-acetyltransferase YP_001366010.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1812 GCN5-related N-acetyltransferase YP_001366011.1 KEGG: sbl:Sbal_1813 hypothetical protein YP_001366012.1 KEGG: sbl:Sbal_1814 hypothetical protein YP_001366013.1 KEGG: sbl:Sbal_1815 hypothetical protein YP_001366014.1 KEGG: sbl:Sbal_1816 hypothetical protein YP_001366015.1 KEGG: sbl:Sbal_1817 hypothetical protein YP_001366016.1 KEGG: sbl:Sbal_1818 hypothetical protein YP_001366017.1 PFAM: PKD domain containing protein; Endonuclease/exonuclease/phosphatase; KEGG: sbl:Sbal_1819 PKD domain containing protein YP_001366018.1 PFAM: protein of unknown function DUF1568; KEGG: she:Shewmr4_2555 protein of unknown function DUF1568 YP_001366019.1 PFAM: putative esterase; KEGG: cps:CPS_4960 putative esterase YP_001366020.1 KEGG: ecs:pO157p26 hypothetical protein YP_001366021.1 KEGG: sbl:Sbal_3472 hypothetical protein YP_001366022.1 KEGG: sbl:Sbal_1829 hypothetical protein YP_001366023.1 KEGG: shw:Sputw3181_2396 hypothetical protein YP_001366024.1 KEGG: shw:Sputw3181_2395 hypothetical protein YP_001366025.1 PFAM: heat shock protein DnaJ domain protein; KEGG: shw:Sputw3181_2394 heat shock protein DnaJ domain protein YP_001366026.1 PFAM: Ppx/GppA phosphatase; KEGG: sbl:Sbal_1833 Ppx/GppA phosphatase YP_001366027.1 PFAM: Polyphosphate kinase; KEGG: sbl:Sbal_1834 polyphosphate kinase YP_001366028.1 KEGG: sbl:Sbal_1835 hypothetical protein YP_001366030.1 PFAM: CreA family protein; KEGG: sbl:Sbal_1836 CreA family protein YP_001366031.1 catalyzes the formation of L-homocysteine from cystathionine YP_001366032.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_1839 integral membrane sensor signal transduction histidine kinase YP_001366033.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shw:Sputw3181_2287 two component transcriptional regulator, winged helix family YP_001366034.1 PFAM: OmpA/MotB domain protein; KEGG: sbl:Sbal_1842 OmpA/MotB domain protein YP_001366035.1 PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: sbl:Sbal_1843 vault protein inter-alpha-trypsin domain protein YP_001366036.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sbl:Sbal_1844 sortase family protein YP_001366037.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1845 diguanylate cyclase YP_001366038.1 PFAM: peptidase M28; KEGG: sbl:Sbal_1846 peptidase M28 YP_001366039.1 KEGG: sbl:Sbal_1847 hypothetical protein YP_001366040.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: sbl:Sbal_1848 alpha-L-glutamate ligases, RimK family YP_001366041.1 PFAM: protein of unknown function DUF413; KEGG: sbl:Sbal_1849 protein of unknown function DUF413 YP_001366042.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_1850 transcriptional regulator, LysR family YP_001366043.1 PFAM: diacylglycerol kinase; KEGG: sbl:Sbal_1851 diacylglycerol kinase YP_001366044.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_001366045.1 PFAM: protein of unknown function DUF450; KEGG: sbl:Sbal_1853 protein of unknown function DUF450 YP_001366046.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001366047.1 PFAM: phage integrase family protein; KEGG: ecc:c1519 prophage lambda integrase YP_001366048.1 KEGG: ppu:PP_1533 excisionase, putative YP_001366049.1 KEGG: sdn:Sden_3279 hypothetical protein YP_001366051.1 KEGG: sdn:Sden_3275 GP46 YP_001366052.1 KEGG: sbl:Sbal_3626 hypothetical protein YP_001366053.1 KEGG: sbl:Sbal_3625 hypothetical protein YP_001366054.1 KEGG: sbl:Sbal_3624 hypothetical protein YP_001366055.1 KEGG: ent:Ent638_0472 hypothetical protein YP_001366057.1 KEGG: sbl:Sbal_3621 hypothetical protein YP_001366058.1 KEGG: sbl:Sbal_3619 hypothetical protein YP_001366059.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: shw:Sputw3181_2507 putative prophage repressor YP_001366060.1 PFAM: helix-turn-helix domain protein; KEGG: shw:Sputw3181_2506 transcriptional regulator, XRE family YP_001366061.1 KEGG: sbl:Sbal_3614 hypothetical protein YP_001366063.1 KEGG: sdn:Sden_3265 hypothetical protein YP_001366064.1 KEGG: sbl:Sbal_3612 putative replication protein YP_001366065.1 PFAM: replication P family protein; KEGG: sbl:Sbal_3611 replication P family protein YP_001366067.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_3261 phage integrase YP_001366068.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_3609 transcriptional regulator, XRE family YP_001366069.1 KEGG: sdn:Sden_3259 hypothetical protein YP_001366070.1 KEGG: cps:CPS_3307 hypothetical protein YP_001366072.1 KEGG: ddi:DDBDRAFT_0217139 hypothetical protein YP_001366073.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: cno:NT01CX_1956 general secretion pathway protein E YP_001366074.1 KEGG: ppr:PBPRA1805 hypothetical protein YP_001366075.1 KEGG: vco:VC0395_A2354 hypothetical protein YP_001366076.1 KEGG: vco:VC0395_A2355 hypothetical protein YP_001366077.1 PFAM: HipA domain protein; KEGG: yen:YE4128 hypothetical protein YP_001366078.1 PFAM: helix-turn-helix domain protein; KEGG: yen:YE4129 hypothetical protein YP_001366079.1 KEGG: bam:Bamb_4713 hypothetical protein YP_001366082.1 KEGG: sbl:Sbal_3554 putative prophage repressor YP_001366083.1 PFAM: Amidohydrolase 3; KEGG: mxa:MXAN_3896 putative lipoprotein YP_001366084.1 KEGG: mag:amb3452 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_001366085.1 KEGG: cph:Cpha266_0785 hypothetical protein YP_001366086.1 PFAM: Domain of unknown function DUF1814; KEGG: shm:Shewmr7_0348 hypothetical protein YP_001366087.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sbl:Sbal_1854 protein tyrosine phosphatase YP_001366088.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc) YP_001366089.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: sbl:Sbal_1856 2OG-Fe(II) oxygenase YP_001366090.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae YP_001366091.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001366092.1 PFAM: peptidase M22 glycoprotease; KEGG: sbl:Sbal_1859 peptidase M22, glycoprotease YP_001366093.1 KEGG: sbl:Sbal_1860 hypothetical protein YP_001366094.1 KEGG: sbl:Sbal_1861 hypothetical protein YP_001366095.1 KEGG: sbl:Sbal_1862 hypothetical protein YP_001366096.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: sbl:Sbal_1863 alpha/beta hydrolase fold YP_001366097.1 Activates fatty acids by binding to coenzyme A YP_001366098.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: sbl:Sbal_1865 ribonuclease D YP_001366099.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell YP_001366100.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sbl:Sbal_1867 septum site-determining protein MinD YP_001366101.1 blocks the formation of polar Z-ring septums YP_001366102.1 PFAM: protein of unknown function DUF709; KEGG: sbl:Sbal_1869 protein of unknown function DUF709 YP_001366103.1 TIGRFAM: lytic murein transglycosylase; KEGG: sbl:Sbal_1870 lytic murein transglycosylase YP_001366104.1 PFAM: protein of unknown function UPF0153; KEGG: sbl:Sbal_1871 protein of unknown function UPF0153 YP_001366105.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_1872 methyl-accepting chemotaxis sensory transducer YP_001366106.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001366107.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily YP_001366108.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_001366109.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA YP_001366110.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; KEGG: sbl:Sbal_1879 hydrogenase nickel insertion protein HypA YP_001366111.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: sbl:Sbal_1880 hydrogenase expression/formation protein HypE YP_001366112.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: sbl:Sbal_1881 hydrogenase expression/formation protein HypD YP_001366113.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: sbl:Sbal_1882 hydrogenase assembly chaperone HypC/HupF YP_001366114.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: sbl:Sbal_1883 hydrogenase accessory protein HypB YP_001366115.1 KEGG: bur:Bcep18194_A6286 hypothetical protein YP_001366116.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: sbl:Sbal_1884 (NiFe) hydrogenase maturation protein HypF YP_001366117.1 KEGG: sbl:Sbal_1885 hypothetical protein YP_001366118.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; KEGG: sbl:Sbal_1886 hydrogenase maturation protease YP_001366119.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: sbl:Sbal_1887 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001366120.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: sbl:Sbal_1888 nickel-dependent hydrogenase, large subunit YP_001366121.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; KEGG: sbl:Sbal_1889 hydrogenase (NiFe) small subunit HydA YP_001366122.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sbl:Sbal_1890 redoxin domain protein YP_001366123.1 KEGG: sbl:Sbal_1891 lipoprotein, putative YP_001366124.1 KEGG: sbl:Sbal_1892 hypothetical protein YP_001366125.1 PFAM: ApbE family lipoprotein; KEGG: sbl:Sbal_1893 ApbE family lipoprotein YP_001366126.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_1894 two component transcriptional regulator, winged helix family YP_001366127.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_1895 integral membrane sensor signal transduction histidine kinase YP_001366128.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan YP_001366129.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_001366130.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sbl:Sbal_1898 peptidoglycan-binding domain 1 protein YP_001366131.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: sbl:Sbal_1899 protein of unknown function DUF882 YP_001366132.1 KEGG: sbl:Sbal_1900 hypothetical protein YP_001366133.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001366134.1 PFAM: protein of unknown function DUF490; KEGG: sbl:Sbal_1902 protein of unknown function DUF490 YP_001366135.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: sbl:Sbal_1903 surface antigen (D15) YP_001366136.1 PFAM: peptidase T2 asparaginase 2; KEGG: sbl:Sbal_1904 peptidase T2, asparaginase 2 YP_001366137.1 KEGG: sbl:Sbal_1905 membrane protein YP_001366138.1 PFAM: CBS domain containing protein; KEGG: sbl:Sbal_1906 putative signal transduction protein with CBS domains YP_001366139.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases; KEGG: sbl:Sbal_1907 ATP-dependent helicase HrpA YP_001366140.1 PFAM: periplasmic nitrate reductase NapE; KEGG: sbl:Sbal_1908 periplasmic nitrate reductase NapE YP_001366141.1 PFAM: NapD family protein; KEGG: sbl:Sbal_1909 NapD family protein YP_001366142.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC YP_001366143.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sbl:Sbal_1911 nitrate reductase cytochrome c-type subunit (NapB) YP_001366144.1 TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: sbl:Sbal_1912 periplasmic nitrate (or nitrite) reductase C-type cytochrome, NapC/NirT family YP_001366145.1 PFAM: Domain of unknown function DUF1801; KEGG: sbl:Sbal_1913 hypothetical protein YP_001366146.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001366147.1 KEGG: sbl:Sbal_1915 hypothetical protein YP_001366148.1 PFAM: NUDIX hydrolase; KEGG: sbl:Sbal_1916 NUDIX hydrolase YP_001366149.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: sbl:Sbal_1917 para-aminobenzoate synthase, subunit I YP_001366150.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: sbl:Sbal_1918 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit YP_001366151.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: sbl:Sbal_1919 peptidase S9, prolyl oligopeptidase active site domain protein YP_001366152.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_2216 GCN5-related N-acetyltransferase YP_001366153.1 KEGG: sbl:Sbal_1921 hypothetical protein YP_001366154.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: sbl:Sbal_1922 iron-containing alcohol dehydrogenase YP_001366155.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sbl:Sbal_1923 multiple antibiotic resistance (MarC)-related protein YP_001366156.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: she:Shewmr4_1685 methyl-accepting chemotaxis sensory transducer YP_001366157.1 PFAM: phage integrase family protein; KEGG: csa:Csal_1356 phage integrase YP_001366159.1 KEGG: sdn:Sden_3275 GP46 YP_001366160.1 KEGG: sbl:Sbal_3622 hypothetical protein YP_001366161.1 KEGG: sbl:Sbal_3626 hypothetical protein YP_001366162.1 KEGG: sbl:Sbal_3625 hypothetical protein YP_001366163.1 KEGG: sbl:Sbal_3624 hypothetical protein YP_001366164.1 KEGG: son:SO3002 hypothetical protein YP_001366165.1 KEGG: sbl:Sbal_3623 hypothetical protein YP_001366167.1 KEGG: sbl:Sbal_3621 hypothetical protein YP_001366168.1 KEGG: sbl:Sbal_3619 hypothetical protein YP_001366169.1 KEGG: hch:HCH_06392 hypothetical protein YP_001366170.1 PFAM: protein of unknown function DUF450; KEGG: aha:AHA_3069 type I restriction enzyme R protein n terminus (hsdr_n) YP_001366171.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: son:SO2990 prophage LambdaSo, transcriptional regulator, Cro/CI family YP_001366172.1 KEGG: sbl:Sbal_3615 hypothetical protein YP_001366173.1 KEGG: sbl:Sbal_3614 hypothetical protein YP_001366175.1 KEGG: sdn:Sden_3265 hypothetical protein YP_001366176.1 KEGG: sbl:Sbal_3612 putative replication protein YP_001366177.1 PFAM: replication P family protein; KEGG: sbl:Sbal_3611 replication P family protein YP_001366179.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_3261 phage integrase YP_001366180.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_3609 transcriptional regulator, XRE family YP_001366181.1 KEGG: sdn:Sden_3259 hypothetical protein YP_001366182.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; DEAD/DEAH box helicase domain protein; EcoEI R domain protein; SMART: DEAD-like helicases; KEGG: sdn:Sden_1234 type III restriction enzyme, res subunit YP_001366183.1 PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: sdn:Sden_1235 N-6 DNA methylase YP_001366184.1 PFAM: restriction modification system DNA specificity domain; KEGG: sdn:Sden_1237 restriction modification system DNA specificity domain YP_001366185.1 KEGG: sdn:Sden_1238 phospholipase D/transphosphatidylase YP_001366186.1 KEGG: ypp:YPDSF_3243 hypothetical protein YP_001366187.1 KEGG: psb:Psyr_3724 hypothetical protein YP_001366188.1 KEGG: ppd:Ppro_0143 transcriptional regulator, XRE family YP_001366189.1 PFAM: HipA domain protein; KEGG: ppd:Ppro_0263 HipA domain protein YP_001366191.1 PFAM: Radical SAM domain protein; KEGG: vvu:VV2_0908 molybdenum cofactor biosynthesis enzyme YP_001366192.1 KEGG: pin:Ping_3075 hypothetical protein YP_001366193.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: shn:Shewana3_1839 peptidase S1 and S6, chymotrypsin/Hap YP_001366194.1 PFAM: protein of unknown function DUF952 YP_001366195.1 KEGG: sbl:Sbal_1140 hypothetical protein YP_001366196.1 KEGG: cph:Cpha266_0785 hypothetical protein YP_001366197.1 PFAM: Domain of unknown function DUF1814; KEGG: shm:Shewmr7_0348 hypothetical protein YP_001366198.1 KEGG: sbl:Sbal_1140 hypothetical protein YP_001366200.1 KEGG: sbl:Sbal_1979 hypothetical protein YP_001366201.1 KEGG: sbl:Sbal_1980 hypothetical protein YP_001366202.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: sbl:Sbal_1981 FAD dependent oxidoreductase YP_001366203.1 KEGG: sbl:Sbal_1982 hypothetical protein YP_001366204.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_1983 protein of unknown function DUF6, transmembrane YP_001366205.1 TIGRFAM: isoaspartyl dipeptidase; KEGG: sbl:Sbal_1984 isoaspartyl dipeptidase YP_001366206.1 PFAM: C4-dicarboxylate anaerobic carrier; KEGG: sbl:Sbal_1985 C4-dicarboxylate anaerobic carrier YP_001366207.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_1986 TonB-dependent receptor YP_001366208.1 KEGG: sbl:Sbal_1987 cyanophycinase-related exopeptidase-like protein YP_001366209.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sbl:Sbal_1988 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001366210.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1989 DEAD/DEAH box helicase domain protein YP_001366211.1 PFAM: protein of unknown function DUF885; KEGG: sbl:Sbal_1990 protein of unknown function DUF885 YP_001366212.1 KEGG: sbl:Sbal_1991 hypothetical protein YP_001366213.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity YP_001366214.1 PFAM: AsmA family protein; KEGG: sbl:Sbal_1993 AsmA family protein YP_001366215.1 KEGG: sbl:Sbal_1994 intracellular proteinase inhibitor domain protein YP_001366216.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: sbl:Sbal_1995 MLTD_N domain protein YP_001366217.1 PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_1996 hydroxyacylglutathione hydrolase YP_001366218.1 PFAM: Methyltransferase type 11; KEGG: sbl:Sbal_1997 methyltransferase type 11 YP_001366219.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_1998 transcriptional regulator, LysR family YP_001366220.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids YP_001366221.1 KEGG: sbl:Sbal_2000 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001366222.1 KEGG: sbl:Sbal_2001 hypothetical protein YP_001366223.1 PFAM: sodium/hydrogen exchanger; KEGG: sbl:Sbal_2308 sodium/hydrogen exchanger YP_001366224.1 PFAM: Acetamidase/Formamidase; KEGG: sbl:Sbal_2307 acetamidase/formamidase YP_001366225.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA YP_001366226.1 PFAM: glutamine amidotransferase class-II; KEGG: sbl:Sbal_2305 glutamine amidotransferase, class-II YP_001366227.1 KEGG: sbl:Sbal_2304 hypothetical protein YP_001366228.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sbl:Sbal_2303 methylated-DNA-(protein)-cysteine S-methyltransferase YP_001366229.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001366230.1 KEGG: sbl:Sbal_2301 hypothetical protein YP_001366231.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_2300 lysine exporter protein (LysE/YggA) YP_001366232.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine YP_001366233.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_2298 binding-protein-dependent transport systems inner membrane component YP_001366234.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_2297 glycine betaine/L-proline ABC transporter, ATPase subunit YP_001366235.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_2295 FAD dependent oxidoreductase YP_001366236.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sbl:Sbal_2294 thiamine pyrophosphate enzyme domain protein TPP-binding YP_001366237.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: fjo:Fjoh_2409 ferredoxin-dependent glutamate synthase YP_001366238.1 KEGG: sbl:Sbal_2292 hypothetical protein YP_001366239.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_2291 glyoxalase/bleomycin resistance protein/dioxygenase YP_001366240.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sbl:Sbal_2290 alpha amylase, catalytic region YP_001366241.1 PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; SMART: alpha amylase catalytic sub domain; KEGG: sbl:Sbal_2289 alpha amylase, catalytic region YP_001366242.1 PFAM: FAD dependent oxidoreductase; tryptophan halogenase; KEGG: sfr:Sfri_1786 tryptophan halogenase YP_001366243.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sfr:Sfri_1787 TonB-dependent receptor YP_001366244.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: sbl:Sbal_4573 hypothetical protein YP_001366245.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_4572 hypothetical protein YP_001366246.1 PFAM: Fmu (Sun) domain protein; KEGG: sbl:Sbal_4571 hypothetical protein YP_001366247.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: sbl:Sbal_4570 hypothetical protein YP_001366248.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001366249.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_4568 hypothetical protein YP_001366250.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_4567 hypothetical protein YP_001366251.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: sbl:Sbal_4566 hypothetical protein YP_001366252.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: sbl:Sbal_4565 hypothetical protein YP_001366253.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: sbl:Sbal_4564 hypothetical protein YP_001366254.1 PFAM: transglutaminase domain protein; KEGG: sbl:Sbal_4563 hypothetical protein YP_001366255.1 PFAM: protein of unknown function DUF58; KEGG: sbl:Sbal_4562 hypothetical protein YP_001366256.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sbl:Sbal_4561 hypothetical protein YP_001366257.1 PFAM: EAL domain protein; KEGG: sbl:Sbal_4560 hypothetical protein YP_001366258.1 PFAM: Lytic transglycosylase catalytic; KEGG: sbl:Sbal_4559 hypothetical protein YP_001366259.1 PFAM: protein of unknown function DUF195; KEGG: sbl:Sbal_4558 hypothetical protein YP_001366260.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_001366261.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme YP_001366262.1 TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_4555 hypothetical protein YP_001366263.1 KEGG: sbl:Sbal_4552 hypothetical protein YP_001366264.1 KEGG: sbl:Sbal_4551 hypothetical protein; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop YP_001366265.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase YP_001366266.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen YP_001366267.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents YP_001366268.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen YP_001366269.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen YP_001366270.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: shw:Sputw3181_2159 electron transport complex, RnfABCDGE type, A subunit YP_001366271.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sbl:Sbal_4544 hypothetical protein YP_001366272.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; bacteriophage CI repressor; KEGG: son:SO0641 prophage MuSo1, transcriptional regulator, Cro/CI family YP_001366273.1 PFAM: Integrase catalytic region; KEGG: son:SO0643 transposase, putative YP_001366274.1 KEGG: son:SO0644 prophage MuSo1, DNA transposition protein, putative YP_001366276.1 KEGG: shw:Sputw3181_2936 hypothetical protein YP_001366277.1 KEGG: son:SO0647 hypothetical protein YP_001366278.1 KEGG: son:SO0648 hypothetical protein YP_001366279.1 KEGG: son:SO0649 hypothetical protein YP_001366280.1 KEGG: son:SO0650 hypothetical protein YP_001366281.1 PFAM: protein of unknown function DUF1018; KEGG: son:SO0651 hypothetical protein YP_001366282.1 PFAM: Mor transcription activator domain protein; KEGG: son:SO0652 prophage MuSo1, positive regulator of late transcription, putative YP_001366286.1 KEGG: son:SO0658 hypothetical protein YP_001366287.1 PFAM: glycoside hydrolase family 24; KEGG: son:SO0659 lysozyme, putative YP_001366288.1 KEGG: son:SO0660 hypothetical protein YP_001366289.1 KEGG: son:SO0661 zinc finger-related protein YP_001366290.1 KEGG: son:SO0662 hypothetical protein YP_001366291.1 KEGG: vco:VC0395_A0766 hypothetical protein YP_001366292.1 KEGG: son:SO0665 hypothetical protein YP_001366293.1 KEGG: son:SO0666 prophage MuSo1, portal protein, putative YP_001366294.1 PFAM: protein of unknown function DUF935; KEGG: son:SO0667 hypothetical protein YP_001366295.1 TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family; PFAM: phage putative head morphogenesis protein SPP1 gp7; KEGG: son:SO0668 prophage MuSo1, F protein, putative YP_001366296.1 TIGRFAM: phage virion morphogenesis protein; PFAM: phage virion morphogenesis (putative tail completion) protein; KEGG: son:SO0669 prophage MuSo1, virion morphogenesis protein YP_001366297.1 KEGG: son:SO0670 hypothetical protein YP_001366298.1 KEGG: sfr:Sfri_3614 hypothetical protein YP_001366300.1 KEGG: sfr:Sfri_3617 hypothetical protein YP_001366301.1 KEGG: son:SO0674 prophage MuSo1, protein Gp32, putative YP_001366302.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001366303.1 KEGG: son:SO0675 prophage MuSo1, major head subunit, putative YP_001366304.1 PFAM: Rho termination factor domain protein; KEGG: son:SO0676 hypothetical protein YP_001366305.1 PFAM: protein of unknown function DUF1320; KEGG: son:SO0677 hypothetical protein YP_001366306.1 KEGG: son:SO0678 hypothetical protein YP_001366307.1 KEGG: son:SO0679 hypothetical protein YP_001366308.1 TIGRFAM: phage tape measure protein; KEGG: son:SO0680 hypothetical protein YP_001366309.1 KEGG: son:SO0681 hypothetical protein YP_001366310.1 KEGG: son:SO0682 hypothetical protein YP_001366311.1 KEGG: sdn:Sden_3240 hypothetical protein YP_001366312.1 KEGG: sdn:Sden_3239 hypothetical protein YP_001366315.1 KEGG: son:SO0688 hypothetical protein YP_001366316.1 KEGG: son:SO0689 hypothetical protein YP_001366317.1 TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: son:SO0690 type II DNA modification methyltransferase, putative YP_001366318.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001366319.1 PFAM: Rhomboid family protein; KEGG: sbl:Sbal_4542 hypothetical protein YP_001366320.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His YP_001366321.1 KEGG: sbl:Sbal_4540 hypothetical protein YP_001366322.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sbl:Sbal_4539 hypothetical protein YP_001366323.1 KEGG: sbl:Sbal_1756 hypothetical protein YP_001366324.1 KEGG: sbl:Sbal_4538 hypothetical protein YP_001366325.1 KEGG: sbl:Sbal_4537 hypothetical protein YP_001366326.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: sbl:Sbal_4536 hypothetical protein YP_001366327.1 PFAM: SEC-C motif domain protein; KEGG: sbl:Sbal_4535 hypothetical protein YP_001366328.1 KEGG: sbl:Sbal_4534 hypothetical protein YP_001366329.1 PFAM: Smr protein/MutS2; KEGG: sbl:Sbal_4533 hypothetical protein YP_001366330.1 PFAM: peptidase M2 peptidyl-dipeptidase A; KEGG: sbl:Sbal_4532 hypothetical protein YP_001366331.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_4531 hypothetical protein YP_001366332.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA YP_001366333.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: sbl:Sbal_4529 hypothetical protein YP_001366334.1 Represses the expression of the zwf, eda, glp and gap YP_001366335.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001366336.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: sbl:Sbal_4526 hypothetical protein YP_001366337.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_001366338.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate YP_001366339.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001366340.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: sbl:Sbal_4522 hypothetical protein YP_001366341.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor YP_001366342.1 PFAM: Na+ antiporter NhaC; KEGG: sbl:Sbal_4520 hypothetical protein YP_001366343.1 PFAM: glutamine synthetase catalytic region; KEGG: sbl:Sbal_4519 hypothetical protein YP_001366344.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001366345.1 KEGG: sbl:Sbal_4517 hypothetical protein YP_001366346.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group YP_001366347.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: sbl:Sbal_4515 hypothetical protein YP_001366348.1 KEGG: sbl:Sbal_4514 hypothetical protein YP_001366349.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: sbl:Sbal_4513 hypothetical protein YP_001366350.1 negative modulator of the initiation of chromosome replication YP_001366351.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_001366352.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: sbl:Sbal_4510 hypothetical protein YP_001366353.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism YP_001366354.1 PFAM: dehydrogenase E1 component; KEGG: shw:Sputw3181_2123 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) YP_001366355.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: sbl:Sbal_4507 hypothetical protein YP_001366356.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sbl:Sbal_4506 hypothetical protein YP_001366357.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_001366358.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; KEGG: spc:Sputcn32_1889 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001366359.1 KEGG: sbl:Sbal_4503 hypothetical protein YP_001366360.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent YP_001366361.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001366362.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: sbl:Sbal_4500 hypothetical protein YP_001366363.1 KEGG: sbl:Sbal_4499 hypothetical protein YP_001366364.1 KEGG: sbl:Sbal_4498 hypothetical protein YP_001366365.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs YP_001366366.1 with UspC and UspD is involved in resistance to UV irradiation YP_001366367.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia YP_001366368.1 KEGG: sbl:Sbal_4494 hypothetical protein YP_001366369.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: sbl:Sbal_4493 hypothetical protein YP_001366370.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sbl:Sbal_4492 hypothetical protein YP_001366371.1 KEGG: sbl:Sbal_4491 hypothetical protein YP_001366372.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: sbl:Sbal_4490 hypothetical protein YP_001366373.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: sbl:Sbal_4489 hypothetical protein YP_001366374.1 CcoO; FixO YP_001366375.1 CcoN; FixN YP_001366376.1 KEGG: sbl:Sbal_4486 hypothetical protein YP_001366377.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_4485 hypothetical protein YP_001366378.1 KEGG: sbl:Sbal_4484 hypothetical protein YP_001366379.1 PFAM: phage integrase family protein; KEGG: sbl:Sbal_4483 hypothetical protein YP_001366380.1 KEGG: cps:CPS_1629 hypothetical protein YP_001366381.1 KEGG: cps:CPS_1630 hypothetical protein YP_001366382.1 PFAM: Integrase catalytic region; KEGG: cps:CPS_1631 hypothetical protein YP_001366383.1 KEGG: tcx:Tcr_0378 hypothetical protein YP_001366385.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: sbl:Sbal_2412 RNA-directed DNA polymerase (reverse transcriptase) YP_001366386.1 KEGG: mmp:MMP0754 hypothetical protein YP_001366387.1 PFAM: putative esterase; KEGG: spc:Sputcn32_1265 putative esterase YP_001366389.1 PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: vco:VC0395_0927 hypothetical protein YP_001366390.1 KEGG: psa:PST_3465 hypothetical protein YP_001366393.1 KEGG: shm:Shewmr7_1778 hypothetical protein YP_001366394.1 KEGG: psa:PST_3457 transcriptional factor MdcH YP_001366395.1 KEGG: psa:PST_3443 hypothetical protein YP_001366396.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: pcr:Pcryo_0952 type I restriction-modification system, M subunit YP_001366397.1 PFAM: restriction modification system DNA specificity domain; KEGG: pcr:Pcryo_0951 restriction modification system DNA specificity domain YP_001366398.1 PFAM: protein of unknown function DUF262; KEGG: azo:azo2045 hypothetical protein YP_001366399.1 PFAM: protein of unknown function DUF262; KEGG: azo:azo2046 hypothetical protein YP_001366400.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: pcr:Pcryo_0948 type I site-specific deoxyribonuclease, HsdR family YP_001366401.1 PFAM: protein of unknown function DUF45; KEGG: pcr:Pcryo_0947 protein of unknown function DUF45 YP_001366402.1 PFAM: protein of unknown function DUF81; KEGG: shw:Sputw3181_1963 protein of unknown function DUF81 YP_001366403.1 KEGG: shw:Sputw3181_1962 alpha-N-arabinofuranosidase YP_001366404.1 KEGG: sbl:Sbal_2169 hypothetical protein YP_001366405.1 uncharacterized member of the major facilitator superfamily (MFS) YP_001366406.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2167 transcriptional regulator, LysR family YP_001366407.1 PFAM: protein of unknown function UPF0005; KEGG: sbl:Sbal_2166 protein of unknown function UPF0005 YP_001366408.1 PFAM: DsrE family protein; KEGG: sbl:Sbal_2165 DsrE family protein YP_001366409.1 PFAM: DsrE family protein; KEGG: sbl:Sbal_2164 DsrE family protein YP_001366410.1 PFAM: DsrH family protein; KEGG: sbl:Sbal_2163 DsrH family protein YP_001366411.1 PFAM: DsrC family protein; KEGG: sbl:Sbal_2162 DsrC family protein YP_001366412.1 KEGG: sbl:Sbal_2161 hypothetical protein YP_001366413.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001366414.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling YP_001366415.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_2158 AAA ATPase, central domain protein YP_001366416.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: sbl:Sbal_2157 outer membrane lipoprotein carrier protein LolA YP_001366417.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: sbl:Sbal_2156 cell divisionFtsK/SpoIIIE YP_001366418.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system YP_001366419.1 TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: sbl:Sbal_2154 alanine dehydrogenase YP_001366420.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sbl:Sbal_2152 thioredoxin reductase YP_001366421.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001366422.1 PFAM: ribosomal protein L35; KEGG: sbl:Sbal_2150 ribosomal protein L35 YP_001366423.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_001366424.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001366425.1 KEGG: sbl:Sbal_2147 hypothetical protein YP_001366426.1 KEGG: sbl:Sbal_2146 hypothetical protein YP_001366427.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001366428.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sbl:Sbal_2144 MATE efflux family protein YP_001366429.1 KEGG: sbl:Sbal_2132 hypothetical protein YP_001366430.1 KEGG: sbl:Sbal_2131 hypothetical protein YP_001366431.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_2130 diguanylate cyclase with PAS/PAC sensor YP_001366432.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_2129 integral membrane sensor hybrid histidine kinase YP_001366433.1 KEGG: sbl:Sbal_2128 hypothetical protein YP_001366434.1 PFAM: EAL domain protein; response regulator receiver; KEGG: sbl:Sbal_2127 response regulator receiver modulated diguanylate phosphodiesterase YP_001366435.1 KEGG: sbl:Sbal_2126 putative transcriptional regulator, XRE family YP_001366436.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_2125 helix-turn-helix-domain containing protein, AraC type YP_001366437.1 KEGG: sbl:Sbal_2123 hypothetical protein YP_001366438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_2122 ABC transporter related YP_001366439.1 KEGG: sbl:Sbal_2121 hypothetical protein YP_001366440.1 SMART: HNH nuclease; KEGG: sbl:Sbal_2120 HNH nuclease YP_001366441.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_2119 methyltransferase type 12 YP_001366442.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; Hpt domain protein; KEGG: sbl:Sbal_2118 response regulator receiver modulated diguanylate cyclase YP_001366443.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: sbl:Sbal_2117 response regulator receiver modulated CheB methylesterase YP_001366444.1 stimulates methylation of MCP proteins; catalyzes the conversion of glutamine residues to glutamate on methyl-accepting chemotaxis receptors YP_001366445.1 PFAM: MCP methyltransferase CheR-type; KEGG: sbl:Sbal_2115 protein-glutamate O-methyltransferase YP_001366446.1 PFAM: chemotaxis sensory transducer; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_2114 methyl-accepting chemotaxis sensory transducer YP_001366447.1 PFAM: CheW domain protein; KEGG: sbl:Sbal_2113 putative CheW protein YP_001366448.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: shm:Shewmr7_1881 CheA signal transduction histidine kinases YP_001366449.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_2111 transcriptional regulator, fis family YP_001366450.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: son:SO2119 response regulator YP_001366451.1 KEGG: sbl:Sbal_2107 SpoIIAA family protein YP_001366452.1 PFAM: chemotaxis sensory transducer; KEGG: sbl:Sbal_2106 methyl-accepting chemotaxis sensory transducer YP_001366453.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: sbl:Sbal_2105 CoA-binding domain protein YP_001366454.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_2104 diguanylate cyclase YP_001366455.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: sbl:Sbal_2103 protein of unknown function DUF1705 YP_001366456.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: shw:Sputw3181_1914 prolyl oligopeptidase YP_001366457.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_2101 transcriptional regulator, MarR family YP_001366458.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sbl:Sbal_2100 cation diffusion facilitator family transporter YP_001366459.1 serine protease inhibitor, inhibits trypsin and other proteases YP_001366460.1 KEGG: sbl:Sbal_2098 hypothetical protein YP_001366461.1 TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_2097 ATP-dependent DNA helicase, RecQ family YP_001366462.1 KEGG: sbl:Sbal_2096 hypothetical protein YP_001366463.1 KEGG: sbl:Sbal_2095 hypothetical protein YP_001366464.1 PFAM: phage integrase family protein; KEGG: sbl:Sbal_2092 phage integrase family protein YP_001366465.1 PFAM: protein of unknown function DUF839; KEGG: sbl:Sbal_2088 protein of unknown function DUF839 YP_001366466.1 PFAM: DTW domain containing protein; KEGG: sbl:Sbal_2087 DTW domain containing protein YP_001366467.1 PFAM: beta-lactamase; KEGG: sbl:Sbal_2086 beta-lactamase YP_001366468.1 multidrug efflux protein involved in adaptation to low energy shock YP_001366469.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome YP_001366470.1 PFAM: Domain of unknown function DUF1904; KEGG: sbl:Sbal_2080 hypothetical protein YP_001366471.1 KEGG: sbl:Sbal_2079 hypothetical protein YP_001366472.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: sbl:Sbal_2078 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001366473.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sbl:Sbal_2077 acyl-CoA dehydrogenase domain protein YP_001366474.1 KEGG: sbl:Sbal_2076 hypothetical protein YP_001366475.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_2075 short-chain dehydrogenase/reductase SDR YP_001366476.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001366477.1 KEGG: sbl:Sbal_2073 hypothetical protein YP_001366478.1 PFAM: protein of unknown function DUF1049; KEGG: sbl:Sbal_2072 protein of unknown function DUF1049 YP_001366479.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control YP_001366480.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001366481.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP YP_001366482.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001366483.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001366484.1 KEGG: sbl:Sbal_2066 hypothetical protein YP_001366485.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: sbl:Sbal_2065 radical SAM domain protein YP_001366486.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2064 transcriptional regulator, LysR family YP_001366487.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine YP_001366488.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: sbl:Sbal_2062 DNA gyrase, A subunit YP_001366489.1 Involved in ubiquinone biosynthesis YP_001366490.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_2060 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001366491.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001366492.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA YP_001366493.1 PFAM: ferredoxin; KEGG: sbl:Sbal_2057 ferredoxin YP_001366494.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sbl:Sbal_2056 NADH:flavin oxidoreductase/NADH oxidase YP_001366495.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: sbl:Sbal_2055 signal peptide peptidase SppA, 67K type YP_001366496.1 converts asparagine to aspartate and ammonia YP_001366497.1 PFAM: Integrase catalytic region; KEGG: shm:Shewmr7_3128 integrase, catalytic region YP_001366498.1 KEGG: shm:Shewmr7_0934 transposase YP_001366499.1 PFAM: protein of unknown function DUF1315; KEGG: sbl:Sbal_2053 protein of unknown function DUF1315 YP_001366500.1 KEGG: sbl:Sbal_2052 hypothetical protein YP_001366501.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: sbl:Sbal_2051 peptidase M14, carboxypeptidase A YP_001366502.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_2050 two component transcriptional regulator, winged helix family YP_001366503.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shn:Shewana3_1958 TonB-dependent receptor YP_001366504.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_001366505.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001366506.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001366507.1 PFAM: protein of unknown function DUF28; KEGG: sbl:Sbal_2039 protein of unknown function DUF28 YP_001366508.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_001366509.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein family 3; KEGG: sbl:Sbal_2037 diguanylate cyclase YP_001366510.1 TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_2036 putative methyltransferase YP_001366511.1 TIGRFAM: putative methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_2035 putative methyltransferase YP_001366512.1 PFAM: protein of unknown function DUF785; KEGG: sbl:Sbal_2034 protein of unknown function DUF785 YP_001366513.1 KEGG: sbl:Sbal_2033 gonadoliberin III-related protein YP_001366514.1 TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: sbl:Sbal_2032 alpha-L-glutamate ligase-like protein YP_001366515.1 KEGG: sbl:Sbal_2031 response regulator receiver protein YP_001366516.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2030 transcriptional regulator, LysR family YP_001366517.1 KEGG: sbl:Sbal_2029 protein-glutamate O-methyltransferase YP_001366518.1 KEGG: sbl:Sbal_2028 conserved hypothetical methyl-accepting chemotaxis protein YP_001366519.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center YP_001366520.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_001366521.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: sbl:Sbal_2025 thiamine biosynthesis protein ThiS YP_001366522.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: sbl:Sbal_2024 UBA/ThiF-type NAD/FAD binding protein YP_001366523.1 TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; KEGG: sbl:Sbal_2023 thiamine-phosphate pyrophosphorylase YP_001366524.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001366525.1 KEGG: sbl:Sbal_2324 hypothetical protein YP_001366526.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: sbl:Sbal_2325 channel protein, hemolysin III family YP_001366527.1 PFAM: DTW domain containing protein; KEGG: sbl:Sbal_2326 DTW domain containing protein YP_001366528.1 PFAM: NUDIX hydrolase; KEGG: sbl:Sbal_2327 NUDIX hydrolase YP_001366529.1 KEGG: sbl:Sbal_2328 hypothetical protein YP_001366530.1 KEGG: sbl:Sbal_2329 alpha-glucosidase YP_001366531.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_2330 helix-turn-helix-domain containing protein, AraC type YP_001366532.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sbl:Sbal_2331 alkylhydroperoxidase like protein, AhpD family YP_001366533.1 KEGG: sbl:Sbal_2332 hypothetical protein YP_001366534.1 KEGG: she:Shewmr4_1872 alpha/beta hydrolase fold YP_001366536.1 PFAM: YCII-related; KEGG: shw:Sputw3181_2097 YCII-related protein YP_001366537.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_2347 major facilitator superfamily MFS_1 YP_001366538.1 PFAM: glycoside hydrolase 15-related; Glucodextranase N; KEGG: shm:Shewmr7_2109 glucan 1,4-alpha-glucosidase YP_001366539.1 KEGG: son:SO2460 hypothetical protein YP_001366540.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_2350 transcriptional regulator, AraC family YP_001366541.1 PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: sbl:Sbal_2351 sodium/sulphate symporter YP_001366542.1 PFAM: peptidase S24 S26A and S26B; KEGG: sbl:Sbal_2352 putative prophage repressor YP_001366543.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sbl:Sbal_2353 DNA-directed DNA polymerase YP_001366544.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: sbl:Sbal_2354 cupin 4 family protein YP_001366545.1 KEGG: sbl:Sbal_2355 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001366546.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbl:Sbal_2356 periplasmic binding protein/LacI transcriptional regulator YP_001366547.1 KEGG: sbl:Sbal_2357 hypothetical protein YP_001366548.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: sbl:Sbal_2358 methyl-accepting chemotaxis sensory transducer YP_001366549.1 PFAM: amino acid-binding ACT domain protein; KEGG: sbl:Sbal_2359 amino acid-binding ACT domain protein YP_001366550.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sbl:Sbal_2360 phosphotransferase system, phosphocarrier protein HPr YP_001366551.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: sbl:Sbal_2361 phosphoenolpyruvate-protein phosphotransferase YP_001366552.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose YP_001366553.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_2363 major facilitator superfamily MFS_1 YP_001366554.1 PFAM: arsenate reductase and related; KEGG: sbl:Sbal_2366 arsenate reductase and related YP_001366555.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_001366556.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: sbl:Sbal_2368 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins YP_001366557.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_2369 alpha/beta hydrolase fold YP_001366558.1 KEGG: sbl:Sbal_2370 gram negative topoisomerase IV, subunit B YP_001366559.1 KEGG: sbl:Sbal_2371 hypothetical protein YP_001366560.1 PFAM: transposase IS200-family protein; KEGG: she:Shewmr4_2336 transposase IS200-family protein YP_001366561.1 PFAM: carbonic anhydrase; KEGG: sbl:Sbal_2372 carbonate dehydratase YP_001366562.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sbl:Sbal_2373 DegT/DnrJ/EryC1/StrS aminotransferase YP_001366563.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sbl:Sbal_2374 iron-containing alcohol dehydrogenase YP_001366564.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS YP_001366565.1 KEGG: sbl:Sbal_2376 hypothetical protein YP_001366566.1 KEGG: sbl:Sbal_2377 hypothetical protein YP_001366567.1 PFAM: Rhodanese domain protein; KEGG: sbl:Sbal_2378 rhodanese domain protein YP_001366568.1 PFAM: glutaredoxin; Glutathione S-transferase domain; KEGG: sbl:Sbal_2379 glutathione S-transferase, N-terminal domain YP_001366569.1 KEGG: sbl:Sbal_2380 hypothetical protein YP_001366570.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sbl:Sbal_2381 sulphate transporter YP_001366571.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_2382 lysine exporter protein (LysE/YggA) YP_001366572.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sbl:Sbal_2383 putative transcriptional regulator, GntR family YP_001366573.1 KEGG: sbl:Sbal_2384 alkaline phosphatase YP_001366574.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_2385 drug resistance transporter, Bcr/CflA subfamily YP_001366575.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sbl:Sbal_2386 acetolactate synthase, large subunit, biosynthetic type YP_001366576.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_001366577.1 PFAM: heat shock protein Hsp20; KEGG: sbl:Sbal_2388 heat shock protein HSP20 YP_001366578.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001366579.1 KEGG: slo:Shew_1754 hypothetical protein YP_001366580.1 PFAM: protein of unknown function DUF528; KEGG: sbl:Sbal_2390 protein of unknown function DUF528 YP_001366581.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: sbl:Sbal_2391 alpha-L-glutamate ligases, RimK family YP_001366582.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: sbl:Sbal_2392 ferredoxin, 2Fe-2S type, ISC system YP_001366583.1 involved in the maturation of iron-sulfur cluster-containing proteins YP_001366584.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins YP_001366585.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: sbl:Sbal_2395 iron-sulfur cluster assembly protein IscA YP_001366586.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: sbl:Sbal_2396 FeS cluster assembly scaffold IscU YP_001366587.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis YP_001366588.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: shn:Shewana3_2281 transcriptional regulator, BadM/Rrf2 family YP_001366589.1 TIGRFAM: serine O-acetyltransferase; KEGG: sbl:Sbal_2399 serine O-acetyltransferase YP_001366590.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sbl:Sbal_2400 RNA methyltransferase, TrmH family, group 1 YP_001366591.1 PFAM: inositol monophosphatase; KEGG: sbl:Sbal_2401 inositol-phosphate phosphatase YP_001366592.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_2402 lipoprotein releasing system, transmembrane protein, LolC/E family YP_001366593.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_2403 lipoprotein releasing system, ATP-binding protein YP_001366594.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_2404 lipoprotein releasing system, transmembrane protein, LolC/E family YP_001366595.1 KEGG: sbl:Sbal_2405 hypothetical protein YP_001366596.1 TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_2406 transcription-repair coupling factor YP_001366597.1 KEGG: sbl:Sbal_2407 hypothetical protein YP_001366598.1 catalyzes the hydrolysis of acylphosphate YP_001366600.1 KEGG: sbl:Sbal_2409 hypothetical protein YP_001366601.1 KEGG: sbl:Sbal_2410 hypothetical protein YP_001366602.1 KEGG: slo:Shew_1693 hypothetical protein YP_001366603.1 PFAM: protein of unknown function DUF1568; KEGG: sbl:Sbal_2414 protein of unknown function DUF1568 YP_001366604.1 PFAM: protein of unknown function UPF0227; KEGG: sbl:Sbal_2415 protein of unknown function UPF0227 YP_001366605.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides YP_001366606.1 TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; KEGG: sbl:Sbal_2417 L-serine dehydratase 1 YP_001366607.1 TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; KEGG: sbl:Sbal_2418 carboxylesterase YP_001366608.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: spc:Sputcn32_2174 alcohol dehydrogenase GroES domain protein YP_001366609.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2420 transcriptional regulator, LysR family YP_001366610.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_2421 FAD dependent oxidoreductase YP_001366611.1 PFAM: protein of unknown function DUF938; KEGG: shw:Sputw3181_1832 protein of unknown function DUF938 YP_001366612.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_2423 TonB-dependent receptor YP_001366613.1 SMART: helicase c2; KEGG: sbl:Sbal_2424 helicase C2 YP_001366614.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3087 protein of unknown function DUF1568 YP_001366615.1 KEGG: vvy:VV1861 hypothetical protein YP_001366616.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_B0225 putative acetyltransferase YP_001366617.1 KEGG: cps:CPS_2750 hypothetical protein YP_001366618.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_001366619.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_001366620.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001366621.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate YP_001366622.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001366623.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide YP_001366624.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_001366625.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis YP_001366626.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: sbl:Sbal_2433 aromatic amino acid transporter YP_001366627.1 KEGG: sbl:Sbal_2434 hypothetical protein YP_001366628.1 KEGG: sbl:Sbal_2435 hypothetical protein YP_001366629.1 PFAM: uncharacterised conserved protein UCP025560; KEGG: sbl:Sbal_2436 uncharacterised conserved protein UCP025560 YP_001366630.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_2437 GCN5-related N-acetyltransferase YP_001366631.1 PFAM: protein of unknown function DUF1379; KEGG: sbl:Sbal_2438 protein of unknown function DUF1379 YP_001366632.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001366633.1 PFAM: NAD-glutamate dehydrogenase; KEGG: sbl:Sbal_2440 NAD-glutamate dehydrogenase YP_001366634.1 KEGG: sbl:Sbal_2441 hypothetical protein YP_001366635.1 KEGG: sbl:Sbal_2442 BNR repeat protein YP_001366636.1 PFAM: protein of unknown function DUF1329; KEGG: sbl:Sbal_2443 protein of unknown function DUF1329 YP_001366637.1 PFAM: protein of unknown function DUF1302; KEGG: sbl:Sbal_2444 protein of unknown function DUF1302 YP_001366638.1 KEGG: sbl:Sbal_2445 hypothetical protein YP_001366639.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sbl:Sbal_2446 aminopeptidase N YP_001366640.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 YP_001366641.1 affects solute and DNA transport through an unknown mechanism YP_001366642.1 PFAM: GAF domain protein; KEGG: sbl:Sbal_2449 putative GAF sensor protein YP_001366643.1 PFAM: YebG family protein; KEGG: sbl:Sbal_2450 YebG family protein YP_001366644.1 PFAM: Paraquat-inducible protein A; KEGG: sbl:Sbal_2451 paraquat-inducible protein A YP_001366645.1 PFAM: Paraquat-inducible protein A; KEGG: sbl:Sbal_2452 paraquat-inducible protein A YP_001366646.1 PFAM: Mammalian cell entry related domain protein; KEGG: sbl:Sbal_2453 mammalian cell entry related domain protein YP_001366647.1 PFAM: nucleoside recognition domain protein; KEGG: sbl:Sbal_2454 nucleoside recognition domain protein YP_001366648.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA YP_001366649.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: sbl:Sbal_2456 hydrolase, TatD family YP_001366650.1 KEGG: sbl:Sbal_2457 type IV pilus biogenesis protein PilZ YP_001366651.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: sbl:Sbal_2458 DNA polymerase III, delta prime subunit YP_001366652.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_001366653.1 PFAM: aminodeoxychorismate lyase; KEGG: sbl:Sbal_2460 aminodeoxychorismate lyase YP_001366654.1 PFAM: aminotransferase class IV; KEGG: sbl:Sbal_2461 aminotransferase, class IV YP_001366655.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_001366656.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor YP_001366657.1 KEGG: sbl:Sbal_2464 ATP-binding protein, Mrp/Nbp35 family YP_001366658.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_001366659.1 PFAM: Auxin Efflux Carrier; KEGG: sbl:Sbal_2466 auxin efflux carrier YP_001366660.1 PFAM: protein of unknown function DUF34; KEGG: sbl:Sbal_2467 protein of unknown function DUF34 YP_001366661.1 PFAM: 17 kDa surface antigen; KEGG: sbl:Sbal_2468 17 kDa surface antigen YP_001366662.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys YP_001366663.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_001366664.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001366665.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_2472 ATP-dependent Clp protease, ATP-binding subunit ClpA YP_001366666.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA YP_001366667.1 TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: sbl:Sbal_2474 putative cold-shock DNA-binding domain protein YP_001366668.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; KEGG: sbl:Sbal_2475 isocitrate dehydrogenase, NADP-dependent YP_001366669.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_2476 pseudouridylate synthase YP_001366670.1 PFAM: NUDIX hydrolase; KEGG: sbl:Sbal_2477 NUDIX hydrolase YP_001366671.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001366672.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis YP_001366673.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_001366674.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: sbl:Sbal_2481 cupin 4 family protein YP_001366675.1 KEGG: shw:Sputw3181_1772 hypothetical protein YP_001366676.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sbl:Sbal_2483 Glu/Leu/Phe/Val dehydrogenase, dimerisation region YP_001366677.1 KEGG: shw:Sputw3181_1770 hypothetical protein YP_001366678.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_2485 transcriptional regulator, MarR family YP_001366679.1 PFAM: protein of unknown function DUF1285; KEGG: sbl:Sbal_2486 protein of unknown function DUF1285 YP_001366680.1 PFAM: FAD linked oxidase domain protein; KEGG: sbl:Sbal_2487 FAD linked oxidase domain protein YP_001366681.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001366682.1 PFAM: protein of unknown function DUF299; KEGG: sbl:Sbal_2489 protein of unknown function DUF299 YP_001366683.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate YP_001366684.1 PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; chitinase domain protein; SMART: chitinase II; KEGG: sbl:Sbal_2491 chitinase YP_001366685.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_2492 thioesterase superfamily protein YP_001366686.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sbl:Sbal_2493 two component transcriptional regulator, LuxR family YP_001366687.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation YP_001366688.1 KEGG: sbl:Sbal_2495 hypothetical protein YP_001366689.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_001366690.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation YP_001366691.1 PFAM: Ig domain protein group 1 domain protein; KEGG: she:Shewmr4_1583 Ig domain protein, group 1 domain protein YP_001366692.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbl:Sbal_2499 sodium:dicarboxylate symporter YP_001366693.1 KEGG: sbl:Sbal_2500 hypothetical protein YP_001366694.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_2501 two component transcriptional regulator, winged helix family YP_001366695.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_2502 integral membrane sensor signal transduction histidine kinase YP_001366696.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: sbl:Sbal_2503 prolyl 4-hydroxylase, alpha subunit YP_001366697.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_2504 metal dependent phosphohydrolase YP_001366698.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: sbl:Sbal_2505 magnesium and cobalt transport protein CorA YP_001366699.1 KEGG: sbl:Sbal_2506 hypothetical protein YP_001366700.1 KEGG: sbl:Sbal_2507 hypothetical protein YP_001366701.1 Modulates the activities of several enzymes which are inactive in their acetylated form YP_001366702.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer YP_001366703.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_2510 GCN5-related N-acetyltransferase YP_001366704.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sbl:Sbal_2511 GreA/GreB family elongation factor YP_001366705.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: sbl:Sbal_2512 succinyl-CoA synthetase, alpha subunit YP_001366706.1 catalyzes the interconversion of succinyl-CoA and succinate YP_001366707.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sbl:Sbal_2514 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001366708.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001366709.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_001366710.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001366711.1 TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; KEGG: sbl:Sbal_2518 conserved hypothetical succinate dehydrogenase, hydrophobic subunit YP_001366712.1 TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sbl:Sbal_2519 succinate dehydrogenase, cytochrome b subunit YP_001366713.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH YP_001366714.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_2521 efflux transporter, RND family, MFP subunit YP_001366715.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_2522 acriflavin resistance protein YP_001366716.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_2523 acriflavin resistance protein YP_001366717.1 PFAM: uncharacterised conserved protein UCP029143; KEGG: sbl:Sbal_2524 uncharacterised conserved protein UCP029143 YP_001366718.1 KEGG: sbl:Sbal_2525 hypothetical protein YP_001366719.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: sbl:Sbal_2526 MATE efflux family protein YP_001366720.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: sbl:Sbal_2527 ion transport protein YP_001366721.1 KEGG: sbl:Sbal_2528 hypothetical protein YP_001366722.1 PFAM: protein of unknown function DUF991; KEGG: sbl:Sbal_2529 protein of unknown function DUF991 YP_001366723.1 KEGG: sbl:Sbal_2530 hypothetical protein YP_001366724.1 PFAM: peptidase M23B; KEGG: sbl:Sbal_2531 peptidase M23B YP_001366725.1 KEGG: sbl:Sbal_2532 isocitrate dehydrogenase (NADP(+)) YP_001366726.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: sbl:Sbal_2533 cytochrome-c peroxidase YP_001366727.1 PFAM: 37 kDa nucleoid-associated protein; KEGG: sbl:Sbal_2534 37 kDa nucleoid-associated protein YP_001366728.1 PFAM: protein of unknown function DUF1414; KEGG: sbl:Sbal_2535 protein of unknown function DUF1414 YP_001366729.1 PFAM: sulfatase; KEGG: sbl:Sbal_2536 sulfatase YP_001366730.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sbl:Sbal_2537 NADH:flavin oxidoreductase/NADH oxidase YP_001366731.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2538 transcriptional regulator, LysR family YP_001366732.1 PFAM: protein of unknown function DUF358; KEGG: sbl:Sbal_2539 protein of unknown function DUF358 YP_001366733.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_0277 transcriptional regulator, TetR family YP_001366734.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: son:SO1414 flavocytochrome c flavin subunit, putative YP_001366735.1 KEGG: she:Shewmr4_0300 tetraheme cytochrome c, putative YP_001366736.1 KEGG: she:Shewmr4_0301 hypothetical protein YP_001366737.1 KEGG: son:SO1411 hypothetical protein YP_001366738.1 KEGG: she:Shewmr4_0303 hypothetical protein YP_001366739.1 KEGG: bja:blr1269 hypothetical protein YP_001366740.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001366741.1 KEGG: sbl:Sbal_3057 hypothetical protein YP_001366743.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_0237 methyl-accepting chemotaxis sensory transducer YP_001366744.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_0238 porin, gram-negative type YP_001366745.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: slo:Shew_0239 formate dehydrogenase, gamma subunit YP_001366746.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: slo:Shew_0240 cytoplasmic chaperone TorD family protein YP_001366747.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: slo:Shew_0241 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001366748.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: slo:Shew_0242 molydopterin dinucleotide-binding region YP_001366749.1 PFAM: Disulphide bond formation protein DsbB; KEGG: shm:Shewmr7_0287 disulphide bond formation protein DsbB YP_001366750.1 PFAM: regulatory protein LysR; KEGG: she:Shewmr4_3657 transcriptional regulator, LysR family YP_001366751.1 KEGG: sdn:Sden_3259 hypothetical protein YP_001366752.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_3609 transcriptional regulator, XRE family YP_001366753.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_3261 phage integrase YP_001366755.1 PFAM: replication P family protein; KEGG: sbl:Sbal_3611 replication P family protein YP_001366756.1 KEGG: sbl:Sbal_3612 putative replication protein YP_001366757.1 KEGG: sdn:Sden_3265 hypothetical protein YP_001366759.1 KEGG: sbl:Sbal_3614 hypothetical protein YP_001366760.1 KEGG: sdn:Sden_3267 hypothetical protein YP_001366761.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: sfr:Sfri_1648 putative phage repressor YP_001366762.1 KEGG: pen:PSEEN3683 hypothetical protein YP_001366763.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pen:PSEEN3682 hypothetical protein YP_001366764.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pto:PTO1106 hypothetical regulatory protein YP_001366765.1 PFAM: protein of unknown function DUF450; KEGG: aha:AHA_3069 type I restriction enzyme R protein n terminus (hsdr_n) YP_001366766.1 KEGG: sbl:Sbal_3619 hypothetical protein YP_001366767.1 KEGG: sbl:Sbal_3621 hypothetical protein YP_001366769.1 KEGG: ent:Ent638_0472 hypothetical protein YP_001366770.1 KEGG: sbl:Sbal_3624 hypothetical protein YP_001366771.1 KEGG: sbl:Sbal_3625 hypothetical protein YP_001366772.1 KEGG: sbl:Sbal_3626 hypothetical protein YP_001366773.1 KEGG: sdn:Sden_3275 GP46 YP_001366774.1 KEGG: plu:plu2946 hypothetical protein YP_001366775.1 KEGG: plu:plu2947 hypothetical protein YP_001366776.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_2540 diguanylate cyclase YP_001366777.1 KEGG: sbl:Sbal_2541 hypothetical protein YP_001366778.1 KEGG: sbl:Sbal_2542 hypothetical protein YP_001366779.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001366780.1 PFAM: PfkB domain protein; KEGG: sbl:Sbal_2544 inosine kinase YP_001366781.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_001366782.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001366783.1 PFAM: Thioredoxin domain; KEGG: sbl:Sbal_2547 thioredoxin domain YP_001366784.1 molecular chaperone YP_001366785.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_2549 acriflavin resistance protein YP_001366786.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_2550 efflux transporter, RND family, MFP subunit YP_001366787.1 PFAM: NlpBDapX family lipoprotein; KEGG: sbl:Sbal_2551 NlpBDapX family lipoprotein YP_001366788.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001366789.1 PFAM: amino acid-binding ACT domain protein; KEGG: sbl:Sbal_2553 amino acid-binding ACT domain protein YP_001366790.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine YP_001366791.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_2555 lysine exporter protein (LysE/YggA) YP_001366792.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_001366793.1 putative metalloprotease YP_001366794.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family YP_001366795.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans YP_001366796.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sbl:Sbal_2560 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001366797.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_001366798.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system YP_001366799.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_2563 methyl-accepting chemotaxis sensory transducer YP_001366800.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_1381 integrase, catalytic region YP_001366801.1 KEGG: sbl:Sbal_1382 transposase YP_001366802.1 KEGG: sbl:Sbal_2564 conserved hypothetical ATP-dependent protease YP_001366803.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP YP_001366804.1 PFAM: ribosome modulation factor; KEGG: shw:Sputw3181_2389 ribosome modulation factor YP_001366805.1 KEGG: sbl:Sbal_2567 hypothetical protein YP_001366806.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth YP_001366807.1 PFAM: glutaredoxin 2; KEGG: sbl:Sbal_2569 glutaredoxin 2 YP_001366808.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA YP_001366809.1 KEGG: pat:Patl_1925 hypothetical protein YP_001366810.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_2571 GCN5-related N-acetyltransferase YP_001366811.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001366812.1 PFAM: conserved hypothetical protein 103; KEGG: sbl:Sbal_2573 conserved hypothetical protein 103 YP_001366813.1 KEGG: sbl:Sbal_2574 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_001366814.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001366815.1 PFAM: protein of unknown function DUF454; KEGG: sbl:Sbal_2576 protein of unknown function DUF454 YP_001366816.1 KEGG: sbl:Sbal_2577 hypothetical protein YP_001366817.1 KEGG: sbl:Sbal_2578 hypothetical protein YP_001366818.1 PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: sbl:Sbal_2579 protein of unknown function DUF692 YP_001366819.1 KEGG: sbl:Sbal_2580 hypothetical protein YP_001366820.1 PFAM: dihydrouridine synthase DuS; KEGG: sbl:Sbal_2581 dihydrouridine synthase, DuS YP_001366821.1 KEGG: sbl:Sbal_2582 transcriptional regulator, TraR/DksA family YP_001366822.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shm:Shewmr7_2335 TonB-dependent receptor YP_001366823.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides YP_001366824.1 PFAM: phospholipase/Carboxylesterase; KEGG: shw:Sputw3181_1696 carboxylesterase YP_001366825.1 KEGG: shw:Sputw3181_1695 hypothetical protein YP_001366826.1 PFAM: Peptidase M1 membrane alanine aminopeptidase ; Leukotriene A4 hydrolase; KEGG: sbl:Sbal_2589 peptidase M1, membrane alanine aminopeptidase YP_001366827.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_2590 peptidylprolyl isomerase, FKBP-type YP_001366828.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: sbl:Sbal_2591 lytic murein transglycosylase YP_001366829.1 KEGG: sbl:Sbal_2592 hypothetical protein YP_001366830.1 KEGG: sbl:Sbal_2593 hypothetical protein YP_001366831.1 PFAM: response regulator receiver; CheW domain protein; KEGG: sbl:Sbal_2594 putative CheW protein YP_001366832.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_2595 methyltransferase type 11 YP_001366833.1 SMART: peptidase S16 lon domain protein; KEGG: sbl:Sbal_2596 peptidase S16, lon domain protein YP_001366834.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_2597 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001366835.1 TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: sbl:Sbal_2598 anti-ECFsigma factor, ChrR YP_001366836.1 KEGG: shw:Sputw3181_1684 hypothetical protein YP_001366837.1 KEGG: sbl:Sbal_2600 hypothetical protein YP_001366838.1 KEGG: sbl:Sbal_2601 hypothetical protein YP_001366839.1 PFAM: protein of unknown function DUF307; KEGG: shw:Sputw3181_1678 protein of unknown function DUF307 YP_001366840.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_2603 alpha/beta hydrolase fold YP_001366841.1 KEGG: sbl:Sbal_2604 zinc carboxypeptidase-related protein YP_001366842.1 KEGG: sbl:Sbal_2605 conserved hypothetical ABC transporter protein YP_001366843.1 KEGG: sbl:Sbal_2606 hypothetical protein YP_001366844.1 activates fatty acids by binding to coenzyme A YP_001366845.1 KEGG: sbl:Sbal_2608 hypothetical protein YP_001366846.1 PFAM: protein of unknown function DUF55; KEGG: sbl:Sbal_2609 protein of unknown function DUF55 YP_001366847.1 KEGG: sbl:Sbal_2610 hypothetical protein YP_001366848.1 KEGG: sbl:Sbal_2612 hypothetical protein YP_001366849.1 PFAM: protein of unknown function DUF124; KEGG: shw:Sputw3181_2352 protein of unknown function DUF124 YP_001366850.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2614 transcriptional regulator, LysR family YP_001366851.1 PFAM: homogentisate 12-dioxygenase; KEGG: spc:Sputcn32_1671 homogentisate 1,2-dioxygenase YP_001366852.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_2616 4-hydroxyphenylpyruvate dioxygenase YP_001366853.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sbl:Sbal_2617 transferase hexapeptide repeat containing protein YP_001366854.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_2618 lysine exporter protein (LysE/YggA) YP_001366855.1 PFAM: protein of unknown function DUF482; KEGG: sbl:Sbal_2619 protein of unknown function DUF482 YP_001366856.1 TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: sbl:Sbal_2620 gamma-glutamyltransferase YP_001366857.1 KEGG: pha:PSHAb0221 hypothetical protein YP_001366858.1 TIGRFAM: dipeptidase, putative; PFAM: peptidase M20; KEGG: she:Shewmr4_2301 dipeptidase, putative YP_001366859.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sbl:Sbal_2627 peptidyl-dipeptidase DCP YP_001366860.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_2628 GCN5-related N-acetyltransferase YP_001366861.1 KEGG: sbl:Sbal_2628 GCN5-related N-acetyltransferase YP_001366862.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sbl:Sbal_2629 peptidyl-dipeptidase DCP YP_001366863.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate YP_001366864.1 KEGG: sbl:Sbal_2631 hypothetical protein YP_001366865.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate YP_001366866.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sbl:Sbal_2633 transcriptional regulator, GntR family YP_001366867.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis YP_001366868.1 KEGG: sbl:Sbal_2635 hypothetical protein YP_001366869.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: sbl:Sbal_2636 exonuclease, RNase T and DNA polymerase III YP_001366870.1 PFAM: CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: sbl:Sbal_2637 putative signal-transduction protein with CBS domains YP_001366871.1 PFAM: Na+ symporter; KEGG: sbl:Sbal_2638 Na+/solute symporter YP_001366872.1 KEGG: sbl:Sbal_2639 hypothetical protein YP_001366873.1 PFAM: DSBA oxidoreductase; KEGG: sbl:Sbal_2640 DsbA oxidoreductase YP_001366874.1 KEGG: sbl:Sbal_2641 NAD-dependent epimerase/dehydratase YP_001366875.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_2642 metal dependent phosphohydrolase YP_001366876.1 KEGG: sbl:Sbal_2643 hypothetical protein YP_001366877.1 KEGG: shw:Sputw3181_1645 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_001366878.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region; KEGG: sbl:Sbal_2655 cell division protein ZipA YP_001366879.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: sbl:Sbal_2656 chromosome segregation protein SMC YP_001366880.1 putative role in sulfur assimilation YP_001366881.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs YP_001366882.1 PFAM: RDD domain containing protein; KEGG: sbl:Sbal_2662 RDD domain containing protein YP_001366883.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sbl:Sbal_2663 cysteine synthase A YP_001366884.1 PFAM: O-methyltransferase family 2; KEGG: spc:Sputcn32_2371 O-methyltransferase, family 2 YP_001366885.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: sbl:Sbal_2665 C4-dicarboxylate transporter/malic acid transport protein YP_001366886.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shn:Shewana3_1558 TonB-dependent receptor YP_001366887.1 PFAM: formate/nitrite transporter; KEGG: sbl:Sbal_2670 formate/nitrite transporter YP_001366888.1 TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: sbl:Sbal_2671 formate acetyltransferase YP_001366889.1 activates pyruvate formate-lyase 1 under anaerobic conditions YP_001366890.1 PFAM: protein of unknown function DUF412; KEGG: sbl:Sbal_2673 protein of unknown function DUF412 YP_001366891.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA YP_001366892.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate YP_001366893.1 KEGG: sbl:Sbal_2676 hypothetical protein YP_001366894.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: ppr:PBPRB1640 hypothetical transposase, IS110 family YP_001366895.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_0459 transposase IS3/IS911 family protein YP_001366896.1 KEGG: sbl:Sbal_2677 hypothetical protein YP_001366897.1 KEGG: sbl:Sbal_2678 hypothetical protein YP_001366898.1 KEGG: sbl:Sbal_2680 hypothetical protein YP_001366899.1 PFAM: protein of unknown function UPF0118; KEGG: sbl:Sbal_2681 protein of unknown function UPF0118 YP_001366900.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate YP_001366901.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; domain of unknown function DUF1731; KEGG: sbl:Sbal_2683 domain of unknown function DUF1731 YP_001366902.1 PFAM: sodium/glutamate symporter; KEGG: sbl:Sbal_2684 sodium/glutamate symporter YP_001366903.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 S26A and S26B; KEGG: sbl:Sbal_2685 signal peptidase I YP_001366904.1 PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_2686 protein of unknown function DUF214 YP_001366905.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_2687 ABC transporter related YP_001366906.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sbl:Sbal_2688 arylesterase YP_001366907.1 KEGG: sbl:Sbal_2689 hypothetical protein YP_001366908.1 PFAM: virulence factor family protein; KEGG: sbl:Sbal_2690 virulence factor family protein YP_001366909.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: sbl:Sbal_2691 protein of unknown function DUF470 YP_001366910.1 SohB; periplasmic protein; member of the peptidase S49 family YP_001366911.1 KEGG: sbl:Sbal_2693 hypothetical protein YP_001366912.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbl:Sbal_2694 short-chain dehydrogenase/reductase SDR YP_001366913.1 KEGG: sbl:Sbal_2695 hypothetical protein YP_001366914.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_2696 pseudouridine synthase YP_001366915.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: sbl:Sbal_2697 putative transcriptional regulator YP_001366916.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: sbl:Sbal_2698 chromosome segregation and condensation protein ScpA YP_001366917.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: sbl:Sbal_2699 SUA5/YciO/YrdC/YwlC family protein YP_001366918.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sbl:Sbal_2700 PHP C-terminal domain protein YP_001366919.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_001366920.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity YP_001366921.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001366922.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate YP_001366923.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001366924.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001366925.1 KEGG: shw:Sputw3181_1599 hypothetical protein YP_001366926.1 KEGG: sbl:Sbal_2707 hypothetical protein YP_001366927.1 KEGG: sbl:Sbal_2708 L-lysine 6-monooxygenase (NADPH) YP_001366928.1 KEGG: sbl:Sbal_2709 hypothetical protein YP_001366929.1 PFAM: IucA/IucC family protein; KEGG: sbl:Sbal_2710 IucA/IucC family protein YP_001366930.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_2711 TonB-dependent siderophore receptor YP_001366931.1 PFAM: ferric iron reductase; KEGG: sbl:Sbal_2712 ferric iron reductase YP_001366932.1 Involved in cell division; probably involved in intracellular septation YP_001366933.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity YP_001366934.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction YP_001366935.1 KEGG: sbl:Sbal_2721 hypothetical protein YP_001366936.1 KEGG: rfr:Rfer_4032 hypothetical protein YP_001366937.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: sbl:Sbal_2723 putative transcriptional regulator, Crp/Fnr family YP_001366938.1 KEGG: sbl:Sbal_2724 hypothetical protein YP_001366939.1 KEGG: sbl:Sbal_2725 uncharacterized conserved coiled coil protein YP_001366940.1 PFAM: DSBA oxidoreductase; KEGG: sbl:Sbal_2726 DsbA oxidoreductase YP_001366941.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_2727 methyl-accepting chemotaxis sensory transducer YP_001366942.1 PFAM: protein of unknown function DUF1097; KEGG: shn:Shewana3_1498 protein of unknown function DUF1097 YP_001366943.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sbl:Sbal_2729 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001366944.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sbl:Sbal_2730 (2Fe-2S)-binding domain protein YP_001366945.1 KEGG: sbl:Sbal_2731 hypothetical protein YP_001366946.1 PFAM: protein of unknown function DUF182; KEGG: sbl:Sbal_2732 protein of unknown function DUF182 YP_001366947.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_2733 methyl-accepting chemotaxis sensory transducer YP_001366948.1 PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_2734 beta-lactamase domain protein YP_001366949.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_2735 alpha/beta hydrolase fold YP_001366950.1 decatenates replicating daughter chromosomes YP_001366951.1 KEGG: sbl:Sbal_2737 hypothetical protein YP_001366952.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001366953.1 PFAM: Colicin V production protein; KEGG: sbl:Sbal_2739 colicin V production protein YP_001366954.1 PFAM: Sporulation domain protein; KEGG: sbl:Sbal_2740 sporulation domain protein YP_001366955.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sbl:Sbal_2741 FolC bifunctional protein YP_001366956.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001366957.1 KEGG: sbl:Sbal_2743 hypothetical protein YP_001366958.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: sbl:Sbal_2744 aspartate-semialdehyde dehydrogenase YP_001366959.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sbl:Sbal_2745 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001366960.1 PFAM: Beta-ketoacyl synthase; KEGG: shw:Sputw3181_1563 beta-ketoacyl synthase YP_001366961.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_2747 FAD dependent oxidoreductase YP_001366962.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: spc:Sputcn32_2447 tRNA/rRNA methyltransferase (SpoU) YP_001366963.1 PFAM: YfcL protein; KEGG: shw:Sputw3181_1560 hypothetical protein YP_001366964.1 PFAM: ATP-NAD/AcoX kinase; KEGG: spc:Sputcn32_2449 ATP-NAD/AcoX kinase YP_001366965.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: sbl:Sbal_2751 major facilitator superfamily MFS_1 YP_001366966.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001366967.1 involved in methylation of ribosomal protein L3 YP_001366968.1 PFAM: Smr protein/MutS2; KEGG: sbl:Sbal_2754 Smr protein/MutS2 YP_001366969.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: sbl:Sbal_2755 phosphohistidine phosphatase, SixA YP_001366970.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_2756 peptidase M16 domain protein YP_001366971.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_2757 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001366972.1 KEGG: shm:Shewmr7_1475 hypothetical protein YP_001366973.1 KEGG: slo:Shew_2423 hypothetical protein YP_001366974.1 KEGG: sbl:Sbal_2759 hypothetical protein YP_001366975.1 KEGG: sbl:Sbal_1382 transposase YP_001366976.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_1381 integrase, catalytic region YP_001366977.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate YP_001366978.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth YP_001366979.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sbl:Sbal_2762 ATPase associated with various cellular activities, AAA_3 YP_001366980.1 PFAM: protein of unknown function DUF58; KEGG: sbl:Sbal_2763 protein of unknown function DUF58 YP_001366981.1 KEGG: sbl:Sbal_2764 hypothetical protein YP_001366982.1 PFAM: von Willebrand factor type A; KEGG: sbl:Sbal_2765 von Willebrand factor, type A YP_001366983.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: von Willebrand factor type A; Tetratricopeptide domain protein; KEGG: sbl:Sbal_2766 tetratricopeptide TPR_2 repeat protein YP_001366984.1 KEGG: sbl:Sbal_2767 hypothetical protein YP_001366985.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001366986.1 KEGG: sbl:Sbal_2769 hypothetical protein YP_001366987.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+ symporter; KEGG: sbl:Sbal_2770 sodium/proline symporter YP_001366988.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO3099 long-chain fatty acid transport protein, putative YP_001366989.1 KEGG: sbl:Sbal_2772 hypothetical protein YP_001366990.1 PFAM: protein of unknown function DUF541; KEGG: sbl:Sbal_2773 protein of unknown function DUF541 YP_001366991.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_2774 efflux transporter, RND family, MFP subunit YP_001366992.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_2775 acriflavin resistance protein YP_001366993.1 KEGG: sbl:Sbal_2776 hypothetical protein YP_001366994.1 PFAM: Rhodanese domain protein; KEGG: sbl:Sbal_2777 rhodanese domain protein YP_001366995.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_2778 GCN5-related N-acetyltransferase YP_001366996.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: sbl:Sbal_2779 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001366997.1 PFAM: YaeQ family protein; KEGG: sbl:Sbal_2780 YaeQ family protein YP_001366998.1 TIGRFAM: siroheme synthase; KEGG: sbl:Sbal_2781 siroheme synthase YP_001366999.1 PFAM: Rhodanese domain protein; KEGG: sbl:Sbal_2782 rhodanese domain protein YP_001367000.1 KEGG: sbl:Sbal_2783 hypothetical protein YP_001367001.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_001367002.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_001367003.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex YP_001367004.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr) YP_001367005.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_001367006.1 KEGG: sbl:Sbal_2789 hypothetical protein YP_001367007.1 PFAM: protein of unknown function DUF479; KEGG: sbl:Sbal_2790 protein of unknown function DUF479 YP_001367008.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_2791 pseudouridylate synthase YP_001367009.1 KEGG: sbl:Sbal_2792 hypothetical protein YP_001367010.1 PFAM: oxidoreductase domain protein; KEGG: sbl:Sbal_2793 oxidoreductase domain protein YP_001367011.1 PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: sbl:Sbal_2794 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_001367012.1 involved in the import of serine and threonine coupled with the import of sodium YP_001367013.1 PFAM: response regulator receiver; CheW domain protein; KEGG: sbl:Sbal_2796 putative CheW protein YP_001367014.1 PFAM: Dual specificity protein phosphatase; KEGG: sbl:Sbal_2797 dual specificity protein phosphatase YP_001367015.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_2798 DEAD/DEAH box helicase domain protein YP_001367016.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: spc:Sputcn32_2496 methylated-DNA--protein-cysteine methyltransferase YP_001367017.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: sbl:Sbal_2800 AlkA domain protein YP_001367018.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_2801 ABC transporter related YP_001367019.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001367020.1 KEGG: sbl:Sbal_2803 hypothetical protein YP_001367021.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: she:Shewmr4_1363 TRAP dicarboxylate transporter, DctP subunit YP_001367022.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sbl:Sbal_2807 tripartite ATP-independent periplasmic transporter, DctQ component YP_001367023.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sbl:Sbal_2808 TRAP dicarboxylate transporter, DctM subunit YP_001367024.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_2809 integral membrane sensor signal transduction histidine kinase YP_001367025.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_2810 two component, sigma54 specific, transcriptional regulator, fis family YP_001367026.1 PFAM: protein of unknown function DUF606; KEGG: sbl:Sbal_2811 protein of unknown function DUF606 YP_001367027.1 PFAM: protein of unknown function DUF606; KEGG: ent:Ent638_1093 protein of unknown function DUF606 YP_001367028.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2813 transcriptional regulator, LysR family YP_001367029.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_2814 major facilitator superfamily MFS_1 YP_001367030.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2815 transcriptional regulator, LysR family YP_001367031.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: sbl:Sbal_2816 protease-associated PA domain protein YP_001367032.1 KEGG: sbl:Sbal_2817 hypothetical protein YP_001367033.1 TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; KEGG: sbl:Sbal_2818 acyl-CoA thioesterase II YP_001367034.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbl:Sbal_2819 short-chain dehydrogenase/reductase SDR YP_001367035.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: sbl:Sbal_2820 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001367036.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: sbl:Sbal_2821 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_001367037.1 PFAM: DoxX family protein; KEGG: sbl:Sbal_2822 DoxX family protein YP_001367038.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2823 transcriptional regulator, LysR family YP_001367039.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_001367040.1 PFAM: small multidrug resistance protein; KEGG: sbl:Sbal_2825 small multidrug resistance protein YP_001367041.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sbl:Sbal_2826 AMP-dependent synthetase and ligase YP_001367042.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: sbl:Sbal_2827 putative transcriptional regulator, MerR family YP_001367043.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sbl:Sbal_2828 acyl-CoA dehydrogenase domain protein YP_001367044.1 PFAM: carboxyl transferase; KEGG: sbl:Sbal_2829 propionyl-CoA carboxylase YP_001367045.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sbl:Sbal_2830 enoyl-CoA hydratase/isomerase YP_001367046.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: sbl:Sbal_2831 carbamoyl-phosphate synthase L chain, ATP-binding YP_001367047.1 PFAM: pyruvate carboxyltransferase; KEGG: sbl:Sbal_2832 pyruvate carboxyltransferase YP_001367048.1 TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; KEGG: sbl:Sbal_2833 3-oxoacid CoA-transferase, A subunit YP_001367049.1 TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: sbl:Sbal_2834 3-oxoacid CoA-transferase, B subunit YP_001367050.1 KEGG: sbl:Sbal_2835 hypothetical protein YP_001367051.1 PFAM: ThiJ/PfpI domain protein; KEGG: sbl:Sbal_2836 ThiJ/PfpI domain protein YP_001367052.1 KEGG: sbl:Sbal_2837 hypothetical protein YP_001367053.1 PFAM: protein of unknown function DUF81; KEGG: sbl:Sbal_2838 protein of unknown function DUF81 YP_001367054.1 PFAM: glucose sorbosone dehydrogenase; KEGG: sbl:Sbal_2839 glucose sorbosone dehydrogenase YP_001367056.1 PFAM: restriction endonuclease; KEGG: vvu:VV1_2450 probable endonuclease YP_001367057.1 KEGG: sbl:Sbal_2841 hypothetical protein YP_001367058.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_001367059.1 KEGG: sbl:Sbal_2843 hypothetical protein YP_001367060.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sbl:Sbal_2844 peptidyl-dipeptidase DCP YP_001367061.1 PFAM: Na+ antiporter NhaC; KEGG: sbl:Sbal_2845 Na+/H+ antiporter NhaC YP_001367062.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: sbl:Sbal_2846 electron transfer flavoprotein, alpha subunit YP_001367063.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sbl:Sbal_2847 electron transfer flavoprotein beta-subunit YP_001367064.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: sbl:Sbal_2848 histone family protein nucleoid-structuring protein H-NS YP_001367065.1 KEGG: spc:Sputcn32_2513 amidohydrolase YP_001367066.1 KEGG: shw:Sputw3181_1494 hypothetical protein YP_001367067.1 KEGG: sbl:Sbal_2853 lipoprotein, putative YP_001367068.1 PFAM: protein of unknown function UPF0066; KEGG: sbl:Sbal_2854 protein of unknown function UPF0066 YP_001367069.1 KEGG: sbl:Sbal_2855 transferase hexapeptide repeat containing protein YP_001367070.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_001367071.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_2857 helix-turn-helix-domain containing protein, AraC type YP_001367072.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; KEGG: sbl:Sbal_2858 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001367073.1 PFAM: Patatin; KEGG: sbl:Sbal_2859 patatin YP_001367074.1 KEGG: spc:Sputcn32_2520 hypothetical protein YP_001367075.1 KEGG: shw:Sputw3181_1487 lipoprotein, putative YP_001367076.1 PFAM: protein of unknown function DUF1017; KEGG: sbl:Sbal_2862 protein of unknown function DUF1017 YP_001367077.1 PFAM: protein of unknown function DUF940 membrane lipoprotein putative; KEGG: sbl:Sbal_2863 protein of unknown function DUF940, membrane lipoprotein putative YP_001367078.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: sbl:Sbal_2864 NADH:flavin oxidoreductase/NADH oxidase YP_001367079.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: sbl:Sbal_2865 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001367080.1 KEGG: sbl:Sbal_2866 glucose-1-phosphate thymidylyltransferase YP_001367081.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: sbl:Sbal_2867 GAF sensor signal transduction histidine kinase YP_001367082.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_2868 response regulator receiver modulated metal dependent phosphohydrolase YP_001367083.1 KEGG: sbl:Sbal_2869 lipoprotein YP_001367084.1 PFAM: protein of unknown function DUF886; KEGG: sbl:Sbal_2870 protein of unknown function DUF886 YP_001367085.1 TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: shm:Shewmr7_1398 phosphoglucosamine mutase YP_001367086.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: she:Shewmr4_1329 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_001367087.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: she:Shewmr4_1328 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_001367088.1 PFAM: glycosyl transferase group 1; KEGG: nha:Nham_2777 glycosyl transferase, group 1 YP_001367089.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_1035 glycosyl transferase, group 1 YP_001367090.1 KEGG: ssp:SSP0069 putative polysaccharide polymerase YP_001367091.1 PFAM: glycosyl transferase family 2; KEGG: ent:Ent638_2648 glycosyl transferase, family 2 YP_001367092.1 KEGG: bfs:BF1017 putative acetyltransferase YP_001367093.1 PFAM: polysaccharide biosynthesis protein; KEGG: ent:Ent638_2649 polysaccharide biosynthesis protein YP_001367094.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ent:Ent638_2650 NAD-dependent epimerase/dehydratase YP_001367095.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: vfi:VF0168 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001367096.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: plu:plu4657 glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP-glucose pyrophosphorylase) YP_001367097.1 NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose YP_001367098.1 PFAM: sugar transferase; KEGG: shn:Shewana3_1377 sugar transferase YP_001367099.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: sbl:Sbal_2891 lipopolysaccharide biosynthesis protein YP_001367100.1 PFAM: polysaccharide export protein; KEGG: shw:Sputw3181_1461 polysaccharide export protein YP_001367101.1 TIGRFAM: transcriptional activator RfaH; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; KEGG: sbl:Sbal_2894 NusG antitermination factor YP_001367102.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: sbl:Sbal_2895 amino acid/peptide transporter YP_001367103.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_2896 response regulator receiver protein YP_001367104.1 PFAM: VacJ family lipoprotein; KEGG: sbl:Sbal_2897 VacJ family lipoprotein YP_001367105.1 KEGG: sbl:Sbal_2898 hypothetical protein YP_001367106.1 KEGG: sbl:Sbal_2899 FlhB domain protein YP_001367107.1 KEGG: sbl:Sbal_2900 hypothetical protein YP_001367108.1 PFAM: CheW domain protein; KEGG: sbl:Sbal_2901 putative CheW protein YP_001367109.1 PFAM: CheW domain protein; KEGG: sbl:Sbal_2902 putative CheW protein YP_001367110.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sbl:Sbal_2903 cobyrinic acid a,c-diamide synthase YP_001367111.1 KEGG: sbl:Sbal_2904 hypothetical protein YP_001367112.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins YP_001367113.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: sbl:Sbal_2906 CheA signal transduction histidine kinase YP_001367114.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: sbl:Sbal_2907 chemotaxis phosphatase, CheZ YP_001367115.1 PFAM: response regulator receiver; KEGG: shn:Shewana3_1360 response regulator receiver protein YP_001367116.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes YP_001367117.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sbl:Sbal_2910 cobyrinic acid a,c-diamide synthase YP_001367118.1 positive regulator of class III flagellar genes YP_001367119.1 membrane protein involved in the flagellar export apparatus YP_001367120.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_001367121.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus YP_001367122.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: sbl:Sbal_2915 flagellar biosynthetic protein FliQ YP_001367123.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_001367124.1 PFAM: flagellar biosynthesis protein FliO; KEGG: sbl:Sbal_2917 flagellar biosynthesis protein, FliO YP_001367125.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001367126.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation YP_001367127.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_001367128.1 PFAM: flagellar hook-length control protein; KEGG: sbl:Sbal_2921 flagellar hook-length control protein YP_001367129.1 TIGRFAM: flagellar export protein FliJ; KEGG: sbl:Sbal_2922 flagellar export protein FliJ YP_001367130.1 involved in type III protein export during flagellum assembly YP_001367131.1 binds to and inhibits the function of flagella specific ATPase FliI YP_001367132.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001367133.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001367134.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sbl:Sbal_2927 flagellar hook-basal body complex subunit FliE YP_001367135.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sbl:Sbal_2928 two component, sigma54 specific, transcriptional regulator, fis family YP_001367136.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_2929 PAS/PAC sensor signal transduction histidine kinase YP_001367137.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; flagellar regulatory FleQ domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_2930 sigma54 specific transcriptional regulator, fis family YP_001367138.1 flagellin specific chaperone YP_001367139.1 KEGG: sbl:Sbal_2932 hypothetical protein YP_001367140.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: sbl:Sbal_2933 flagellar hook-associated 2 domain protein YP_001367141.1 PFAM: flagellar protein FlaG protein; KEGG: sbl:Sbal_2934 flagellar protein FlaG protein YP_001367142.1 PFAM: flagellin domain protein; KEGG: shw:Sputw3181_1417 flagellin domain protein YP_001367143.1 PFAM: flagellin domain protein; KEGG: shw:Sputw3181_1417 flagellin domain protein YP_001367144.1 PFAM: flagellin domain protein; KEGG: shw:Sputw3181_1417 flagellin domain protein YP_001367145.1 PFAM: flagellin domain protein; KEGG: slo:Shew_1356 flagellin domain protein YP_001367146.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes. YP_001367147.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sbl:Sbal_2938 flagellar hook-associated protein FlgK YP_001367148.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space YP_001367149.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_001367150.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001367151.1 makes up the distal portion of the flagellar basal body rod YP_001367152.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod YP_001367153.1 the hook connects flagellar basal body to the flagellar filament YP_001367154.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production YP_001367155.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_001367156.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod YP_001367157.1 PFAM: MCP methyltransferase CheR-type; KEGG: sbl:Sbal_2948 protein-glutamate O-methyltransferase YP_001367158.1 PFAM: response regulator receiver; CheW domain protein; KEGG: sbl:Sbal_2949 putative CheW protein YP_001367159.1 required for the assembly of the flagellar basal body P-ring YP_001367160.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: sbl:Sbal_2951 anti-sigma-28 factor, FlgM YP_001367161.1 PFAM: FlgN family protein; KEGG: sbl:Sbal_2952 FlgN family protein YP_001367162.1 PFAM: protein of unknown function DUF400; KEGG: sbl:Sbal_2953 protein of unknown function DUF400 YP_001367163.1 KEGG: sbl:Sbal_2954 hypothetical protein YP_001367164.1 KEGG: sbl:Sbal_2955 hypothetical protein YP_001367165.1 PFAM: protein of unknown function DUF115; KEGG: son:SO3259 hypothetical protein YP_001367167.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: cvi:CV4035 probable nucleotide sugar dehydratase YP_001367168.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: vei:Veis_4856 methyltransferase type 11 YP_001367169.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: vfi:VF0141 UDP-bacillosamine synthetase YP_001367170.1 KEGG: vvu:VV1_0809 hypothetical protein YP_001367171.1 PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: vvu:VV1_0808 sialic acid synthase YP_001367172.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: vvu:VV1_0807 UDP-N-acetylglucosamine 2-epimerase YP_001367173.1 KEGG: vvu:VV1_0806 hypothetical protein YP_001367174.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: pca:Pcar_1143 hypothetical protein YP_001367175.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: vvu:VV1_0803 N-acylneuraminate cytidylyltransferase YP_001367176.1 PFAM: CBS domain containing protein; Nucleotidyl transferase; KEGG: vpa:VP0202 putative sugar-phosphate nucleotide transferase YP_001367177.1 KEGG: sbl:Sbal_2969 hypothetical protein YP_001367178.1 KEGG: sbl:Sbal_2970 hypothetical protein YP_001367179.1 KEGG: sbl:Sbal_2971 hypothetical protein YP_001367180.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_2972 transcriptional regulator, TetR family YP_001367181.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_2973 efflux transporter, RND family, MFP subunit YP_001367182.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_2974 acriflavin resistance protein YP_001367183.1 PFAM: protein of unknown function DUF465; KEGG: sbl:Sbal_2975 protein of unknown function DUF465 YP_001367184.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_2976 methyl-accepting chemotaxis sensory transducer YP_001367185.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: sbl:Sbal_2977 cyd operon protein YbgT YP_001367186.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: sbl:Sbal_2978 cytochrome d ubiquinol oxidase, subunit II YP_001367187.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sbl:Sbal_2979 cytochrome bd ubiquinol oxidase, subunit I YP_001367188.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001367189.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function YP_001367190.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sbl:Sbal_2982 CMP/dCMP deaminase, zinc-binding YP_001367191.1 KEGG: shn:Shewana3_1237 hypothetical protein YP_001367192.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001367193.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_001367194.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides YP_001367195.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001367196.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis YP_001367197.1 KEGG: sbl:Sbal_2988 hypothetical protein YP_001367198.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001367199.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001367200.1 KEGG: sbl:Sbal_2991 hypothetical protein YP_001367201.1 TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_2992 type IV pilus biogenesis/stability protein PilW YP_001367202.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_001367203.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: sbl:Sbal_2994 protein of unknown function DUF21 YP_001367204.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: sbl:Sbal_2995 5'-nucleotidase domain protein YP_001367205.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_2996 transcriptional regulator, LysR family YP_001367206.1 PFAM: DoxX family protein; KEGG: sbl:Sbal_2997 DoxX family protein YP_001367207.1 PFAM: Pirin domain protein; Cupin 2 conserved barrel domain protein; KEGG: sbl:Sbal_2998 pirin domain protein domain protein YP_001367208.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_2999 GCN5-related N-acetyltransferase YP_001367209.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3000 GCN5-related N-acetyltransferase YP_001367210.1 KEGG: sbl:Sbal_3001 NrfJ-related protein YP_001367211.1 KEGG: sbl:Sbal_3002 hypothetical protein YP_001367212.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3003 GCN5-related N-acetyltransferase YP_001367213.1 KEGG: sbl:Sbal_3004 hypothetical protein YP_001367214.1 KEGG: sbl:Sbal_3005 transcriptional regulator, CopG family YP_001367215.1 PFAM: extracellular solute-binding protein family 1; KEGG: sbl:Sbal_3006 extracellular solute-binding protein, family 1 YP_001367216.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_3007 diguanylate cyclase YP_001367217.1 PFAM: protein of unknown function DUF980; KEGG: sbl:Sbal_3008 protein of unknown function DUF980 YP_001367218.1 KEGG: sbl:Sbal_3009 hypothetical protein YP_001367219.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sbl:Sbal_3010 putative signal transduction protein YP_001367220.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sbl:Sbal_3011 threonine aldolase YP_001367221.1 PFAM: OmpA/MotB domain protein; KEGG: sbl:Sbal_3012 OmpA/MotB domain protein YP_001367222.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sbl:Sbal_3013 MscS mechanosensitive ion channel YP_001367223.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbl:Sbal_3014 redoxin domain protein YP_001367224.1 PFAM: protein of unknown function UPF0126; KEGG: sbl:Sbal_3015 protein of unknown function UPF0126 YP_001367225.1 KEGG: sbl:Sbal_3016 hypothetical protein YP_001367226.1 KEGG: sbl:Sbal_3017 hypothetical protein YP_001367227.1 involved in start site selection during the initiation of translation YP_001367228.1 PFAM: protein of unknown function DUF179; KEGG: sbl:Sbal_3019 protein of unknown function DUF179 YP_001367229.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function YP_001367230.1 PFAM: ferrochelatase; KEGG: sbl:Sbal_3021 ferrochelatase YP_001367231.1 PFAM: glutathione peroxidase; KEGG: sbl:Sbal_3022 glutathione peroxidase YP_001367232.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: sbl:Sbal_3023 twitching motility protein YP_001367233.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: sbl:Sbal_3024 twitching motility protein YP_001367234.1 PFAM: alanine racemase domain protein; KEGG: sbl:Sbal_3025 alanine racemase domain protein YP_001367235.1 TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sbl:Sbal_3026 pyrroline-5-carboxylate reductase YP_001367236.1 PFAM: protein of unknown function YGGT; KEGG: sbl:Sbal_3027 protein of unknown function YGGT YP_001367237.1 PFAM: protein of unknown function DUF167; KEGG: sbl:Sbal_3028 protein of unknown function DUF167 YP_001367238.1 KEGG: sbl:Sbal_3029 hypothetical protein YP_001367239.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_001367240.1 KEGG: sbl:Sbal_3031 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001367241.1 PFAM: protein of unknown function DUF885; KEGG: sbl:Sbal_3032 protein of unknown function DUF885 YP_001367242.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3034 transcriptional regulator, LysR family YP_001367243.1 KEGG: sbl:Sbal_3035 hypothetical protein YP_001367244.1 catalyzes the formation of glutamate from glutamine YP_001367245.1 PFAM: protein of unknown function DUF469; KEGG: sbl:Sbal_3037 protein of unknown function DUF469 YP_001367246.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine YP_001367247.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: sbl:Sbal_3039 A/G-specific adenine glycosylase YP_001367248.1 PFAM: Fe(II) trafficking protein YggX; KEGG: spc:Sputcn32_2701 Fe(II) trafficking protein YggX YP_001367249.1 PFAM: YceI family protein; KEGG: sbl:Sbal_3041 YceI family protein YP_001367250.1 PFAM: cytochrome B561; KEGG: sbl:Sbal_3042 cytochrome b561 YP_001367251.1 KEGG: sbl:Sbal_3043 hypothetical protein YP_001367252.1 KEGG: sbl:Sbal_3044 hypothetical protein YP_001367253.1 KEGG: sbl:Sbal_3045 hypothetical protein YP_001367254.1 KEGG: sbl:Sbal_3046 hypothetical protein YP_001367255.1 KEGG: sbl:Sbal_3047 hypothetical protein YP_001367256.1 KEGG: sbl:Sbal_3048 hypothetical protein YP_001367257.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_3049 cyclopropane-fatty-acyl-phospholipid synthase YP_001367258.1 PFAM: protein of unknown function DUF1365; KEGG: sbl:Sbal_3050 protein of unknown function DUF1365 YP_001367259.1 PFAM: amine oxidase; KEGG: sbl:Sbal_3051 amine oxidase YP_001367260.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_3052 short-chain dehydrogenase/reductase SDR YP_001367261.1 PFAM: protein of unknown function DUF1486; KEGG: sbl:Sbal_3053 transcriptional regulator-related protein YP_001367262.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: sbl:Sbal_3054 deoxyribodipyrimidine photo-lyase YP_001367263.1 PFAM: regulatory protein MerR; KEGG: sbl:Sbal_3055 putative transcriptional regulator, MerR family YP_001367264.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: sbl:Sbal_3056 protein of unknown function DUF1722 YP_001367265.1 KEGG: sbl:Sbal_3057 hypothetical protein YP_001367266.1 PFAM: Heavy metal transport/detoxification protein; KEGG: sbl:Sbal_3058 heavy metal transport/detoxification protein YP_001367267.1 KEGG: sbl:Sbal_3059 mercuric transport protein MerT, putative YP_001367268.1 PFAM: transglutaminase domain protein; KEGG: sbl:Sbal_3060 transglutaminase domain protein YP_001367269.1 KEGG: sdn:Sden_0607 hypothetical protein YP_001367270.1 KEGG: sbl:Sbal_3066 hypothetical protein YP_001367271.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_3067 methyl-accepting chemotaxis sensory transducer YP_001367272.1 KEGG: sbl:Sbal_3068 putative HAAAP family transport protein YP_001367273.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: sbl:Sbal_3069 putative endoribonuclease L-PSP YP_001367274.1 PFAM: protein of unknown function DUF1063; KEGG: sbl:Sbal_3070 protein of unknown function DUF1063 YP_001367275.1 PFAM: YheO domain protein; KEGG: sbl:Sbal_3071 YheO domain protein YP_001367276.1 PFAM: protein of unknown function DUF368; KEGG: sbl:Sbal_3073 protein of unknown function DUF368 YP_001367277.1 KEGG: sbl:Sbal_3074 hypothetical protein YP_001367278.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_001367279.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3076 transcriptional regulator, LysR family YP_001367280.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sbl:Sbal_3077 cytosine deaminase YP_001367281.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: sbl:Sbal_3078 protein of unknown function DUF405 YP_001367282.1 PFAM: protein of unknown function DUF1294; KEGG: son:SO1395 membrane protein,putative YP_001367283.1 PFAM: regulatory protein TetR; KEGG: son:SO1393 transcriptional regulator, TetR family YP_001367284.1 PFAM: HPP family protein?; KEGG: son:SO1392 hypothetical protein YP_001367285.1 PFAM: short chain fatty acid transporter; KEGG: sbl:Sbal_3081 short chain fatty acid transporter YP_001367286.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_3082 peptidylprolyl isomerase, FKBP-type YP_001367287.1 PFAM: PKD domain containing protein; glycoside hydrolase family 18; Carbohydrate-binding family V/XII; Chitinase A domain protein; SMART: chitinase II; KEGG: sbl:Sbal_3083 chitinase YP_001367288.1 PFAM: ROK family protein; KEGG: sbl:Sbal_3084 ROK family protein YP_001367289.1 PFAM: creatinase; peptidase M24; KEGG: sbl:Sbal_3085 peptidase M24 YP_001367290.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_3086 metal dependent phosphohydrolase YP_001367291.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: sbl:Sbal_3087 methyl-accepting chemotaxis sensory transducer YP_001367292.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_3088 DEAD/DEAH box helicase domain protein YP_001367293.1 PFAM: amino acid permease-associated region; KEGG: sbl:Sbal_3089 amino acid permease-associated region YP_001367294.1 PFAM: homocysteine S-methyltransferase; KEGG: sbl:Sbal_3090 homocysteine S-methyltransferase YP_001367295.1 KEGG: sbl:Sbal_3091 hypothetical protein YP_001367296.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbl:Sbal_3092 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001367297.1 KEGG: sbl:Sbal_3093 hypothetical protein YP_001367298.1 KEGG: sbl:Sbal_3094 hypothetical protein YP_001367299.1 KEGG: sbl:Sbal_3095 hypothetical protein YP_001367300.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: sbl:Sbal_3096 aldehyde ferredoxin oxidoreductase YP_001367301.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_3097 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001367302.1 KEGG: sbl:Sbal_3098 hypothetical protein YP_001367303.1 PFAM: band 7 protein; KEGG: sbl:Sbal_3099 band 7 protein YP_001367304.1 PFAM: protein of unknown function DUF1449; KEGG: sbl:Sbal_3100 protein of unknown function DUF1449 YP_001367305.1 PFAM: Domain of unknown function DUF1791; KEGG: sbl:Sbal_3101 hypothetical protein YP_001367306.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: sbl:Sbal_3102 carboxypeptidase Taq YP_001367307.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3103 GCN5-related N-acetyltransferase YP_001367308.1 PFAM: protein of unknown function DUF486; KEGG: shw:Sputw3181_2981 protein of unknown function DUF486 YP_001367309.1 KEGG: sbl:Sbal_3105 hypothetical protein YP_001367310.1 PFAM: RDD domain containing protein; KEGG: sbl:Sbal_3106 RDD domain containing protein YP_001367311.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sbl:Sbal_3107 permease YjgP/YjgQ family protein YP_001367312.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sbl:Sbal_3108 permease YjgP/YjgQ family protein YP_001367313.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides YP_001367314.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: sbl:Sbal_3111 DNA polymerase III chi subunit, HolC YP_001367315.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_001367316.1 affects carbohydrate metabolism; has regulatory role in many processes YP_001367317.1 TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: sbl:Sbal_3114 aspartate kinase YP_001367318.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001367319.1 PFAM: regulatory protein RecX; KEGG: sbl:Sbal_3116 regulatory protein RecX YP_001367320.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs YP_001367321.1 This protein performs the mismatch recognition step during the DNA repair process YP_001367322.1 TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: sbl:Sbal_3119 RNA polymerase, sigma 70 subunit, RpoD family YP_001367323.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: sbl:Sbal_3120 peptidase M23B YP_001367324.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: sbl:Sbal_3121 protein-L-isoaspartate O-methyltransferase YP_001367325.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001367326.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: sbl:Sbal_3123 pseudouridylate synthase YP_001367327.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate YP_001367328.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers YP_001367329.1 PFAM: Septum formation initiator; KEGG: sbl:Sbal_3126 septum formation initiator YP_001367330.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001367331.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001367332.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era YP_001367333.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis YP_001367334.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001367335.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate YP_001367336.1 PFAM: Domain of unknown function DUF1852; KEGG: sbl:Sbal_3133 hypothetical protein YP_001367338.1 TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; KEGG: sbl:Sbal_3146 (p)ppGpp synthetase I, SpoT/RelA YP_001367339.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S] YP_001367340.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system YP_001367341.1 PFAM: protein of unknown function DUF416; KEGG: sbl:Sbal_3149 protein of unknown function DUF416 YP_001367342.1 KEGG: sbl:Sbal_3150 hypothetical protein YP_001367343.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3151 transcriptional regulator, LysR family YP_001367344.1 PFAM: Auxin Efflux Carrier; KEGG: sbl:Sbal_3152 auxin efflux carrier YP_001367345.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: sbl:Sbal_3153 DNA repair protein RecN YP_001367346.1 PFAM: phosphatidylglycerophosphatase A; KEGG: sbl:Sbal_3154 phosphatidylglycerophosphatase YP_001367347.1 TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; KEGG: sbl:Sbal_3155 thiamine-monophosphate kinase YP_001367348.1 Regulates rRNA biosynthesis by transcriptional antitermination YP_001367349.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not YP_001367350.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: sbl:Sbal_3158 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001367351.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine YP_001367352.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: sbl:Sbal_3160 riboflavin biosynthesis protein RibD YP_001367353.1 PFAM: ATP-cone domain protein; KEGG: sbl:Sbal_3161 ATP-cone domain protein YP_001367354.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001367355.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001367356.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3164 transcriptional regulator, LysR family YP_001367357.1 PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_3165 beta-lactamase domain protein YP_001367358.1 KEGG: sbl:Sbal_3166 putative protein-disulfide isomerase YP_001367359.1 KEGG: sbl:Sbal_3167 hypothetical protein YP_001367360.1 PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: sbl:Sbal_3168 metallophosphoesterase YP_001367361.1 KEGG: sbl:Sbal_3169 hypothetical protein YP_001367362.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3170 efflux transporter, RND family, MFP subunit YP_001367363.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_3171 acriflavin resistance protein YP_001367364.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_3172 drug resistance transporter, Bcr/CflA subfamily YP_001367365.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sbl:Sbal_3173 transcriptional regulator, AraC family YP_001367366.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_3174 protein of unknown function DUF6, transmembrane YP_001367367.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_3175 helix-turn-helix-domain containing protein, AraC type YP_001367368.1 PFAM: protein of unknown function DUF88; KEGG: sbl:Sbal_3176 protein of unknown function DUF88 YP_001367369.1 PFAM: globin; KEGG: sbl:Sbal_3177 globin YP_001367370.1 KEGG: sbl:Sbal_3178 hypothetical protein YP_001367371.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_3179 diguanylate cyclase/phosphodiesterase YP_001367372.1 KEGG: sbl:Sbal_3180 hypothetical protein YP_001367373.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_3181 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001367374.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_3182 efflux transporter, RND family, MFP subunit YP_001367375.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_3183 transcriptional regulator, TetR family YP_001367376.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3184 transcriptional regulator, LysR family YP_001367377.1 PFAM: transmembrane pair domain protein; KEGG: sbl:Sbal_3188 transmembrane pair domain protein YP_001367378.1 KEGG: sbl:Sbal_3191 extracellular solute-binding protein, family 3 YP_001367379.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_3192 transcriptional regulator, LysR family YP_001367380.1 PFAM: adenylosuccinate synthetase; KEGG: sbl:Sbal_3193 adenylosuccinate synthase YP_001367381.1 PFAM: response regulator receiver; CheW domain protein; KEGG: sbl:Sbal_3194 putative CheW protein YP_001367382.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_3195 thioesterase superfamily protein YP_001367383.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sbl:Sbal_3196 diguanylate cyclase/phosphodiesterase YP_001367384.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sbl:Sbal_3197 putative signal transduction protein YP_001367385.1 PFAM: peptidase U32; KEGG: sbl:Sbal_3198 peptidase U32 YP_001367386.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_3199 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001367387.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: sbl:Sbal_3200 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_001367388.1 PFAM: Sterol-binding domain protein; KEGG: sbl:Sbal_3201 sterol-binding domain protein YP_001367389.1 PFAM: peptidase U32; KEGG: sbl:Sbal_3202 peptidase U32 YP_001367390.1 PFAM: peptidase U32; KEGG: sbl:Sbal_3203 peptidase U32 YP_001367391.1 KEGG: sbl:Sbal_3204 hypothetical protein YP_001367392.1 PFAM: nucleoside recognition domain protein; KEGG: sbl:Sbal_3205 nucleoside recognition domain protein YP_001367393.1 KEGG: asa:ASA_4165 CgeB family protein YP_001367394.1 PFAM: protein of unknown function UPF0016; KEGG: sfr:Sfri_0575 protein of unknown function UPF0016 YP_001367395.1 PFAM: putative transposase; KEGG: shw:Sputw3181_1845 putative transposase YP_001367396.1 KEGG: slo:Shew_2597 hypothetical protein YP_001367397.1 KEGG: sbl:Sbal_1820 hypothetical protein YP_001367398.1 PFAM: metallophosphoesterase; KEGG: sbl:Sbal_3207 metallophosphoesterase YP_001367399.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_3208 phospholipid/glycerol acyltransferase YP_001367400.1 PFAM: CBS domain containing protein; KEGG: sbl:Sbal_3209 CBS domain containing protein YP_001367401.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sbl:Sbal_3210 xanthine/uracil/vitamin C permease YP_001367402.1 TIGRFAM: Trimethylamine N-oxide reductase system TorE; PFAM: periplasmic nitrate reductase NapE; KEGG: sbl:Sbal_3211 periplasmic nitrate reductase NapE YP_001367403.1 TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: sbl:Sbal_3212 trimethylamine-N-oxide reductase C-type cytochrome TorC YP_001367404.1 TIGRFAM: trimethylamine-N-oxide reductase TorA; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: shm:Shewmr7_1116 trimethylamine-N-oxide reductase TorA YP_001367405.1 TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor YP_001367406.1 TIGRFAM: TMAO reductase sytem sensor TorS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sbl:Sbal_3215 multi-sensor hybrid histidine kinase YP_001367407.1 periplasmic sensory protein associated with the TorRS two-component regulatory system YP_001367408.1 response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes YP_001367409.1 PFAM: type IV pilus assembly PilZ; KEGG: sbl:Sbal_3218 type IV pilus assembly PilZ YP_001367410.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001367411.1 PFAM: type IV pilus assembly PilZ; KEGG: sbl:Sbal_3220 type IV pilus assembly PilZ YP_001367412.1 KEGG: sbl:Sbal_3221 alpha/beta hydrolase fold YP_001367413.1 TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_3222 phosphoserine phosphatase SerB YP_001367414.1 KEGG: sbl:Sbal_3223 membrane protein YP_001367415.1 KEGG: sbl:Sbal_1382 transposase YP_001367416.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_1381 integrase, catalytic region YP_001367417.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate YP_001367418.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose YP_001367419.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate YP_001367420.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_001367421.1 PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: shw:Sputw3181_1188 nucleoside-specific channel-forming protein, Tsx YP_001367422.1 TIGRFAM: nucleoside transporter; PFAM: Na dependent nucleoside transporter; nucleoside recognition domain protein; Na dependent nucleoside transporter domain protein; KEGG: sbl:Sbal_3229 nucleoside transporter YP_001367423.1 PFAM: TatD-related deoxyribonuclease; KEGG: sbl:Sbal_3230 TatD-related deoxyribonuclease YP_001367424.1 KEGG: sbl:Sbal_3231 hypothetical protein YP_001367425.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein YP_001367426.1 TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: pin:Ping_1400 CRISPR-associated protein, Csy4 family protein YP_001367427.1 TIGRFAM: CRISPR-associated protein, Csy3 family; KEGG: ecv:APECO1_1207 hypothetical protein YP_001367428.1 TIGRFAM: CRISPR-associated protein, Csy2 family; KEGG: plu:plu1794 hypothetical protein YP_001367429.1 TIGRFAM: CRISPR-associated protein, Csy1 family; KEGG: eca:ECA3681 hypothetical protein YP_001367430.1 TIGRFAM: CRISPR-associated helicase Cas3 family; KEGG: plu:plu1791 hypothetical protein YP_001367431.1 TIGRFAM: CRISPR-associated protein Cas1; KEGG: shw:Sputw3181_2191 CRISPR-associated protein Cas1 YP_001367432.1 KEGG: ade:Adeh_0565 hypothetical protein YP_001367433.1 KEGG: bch:Bcen2424_3738 response regulator receiver protein YP_001367434.1 KEGG: bja:blr1564 hypothetical protein YP_001367435.1 KEGG: har:HEAR0008 putative restriction endonuclease YP_001367437.1 PFAM: helix-turn-helix domain protein; KEGG: yen:YE4129 hypothetical protein YP_001367438.1 PFAM: HipA domain protein; KEGG: yen:YE4128 hypothetical protein YP_001367440.1 KEGG: pat:Patl_1733 hypothetical protein YP_001367441.1 KEGG: pat:Patl_1734 hypothetical protein YP_001367442.1 KEGG: sdn:Sden_3259 hypothetical protein YP_001367443.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_3609 transcriptional regulator, XRE family YP_001367444.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_3261 phage integrase YP_001367446.1 PFAM: replication P family protein; KEGG: sbl:Sbal_3611 replication P family protein YP_001367447.1 KEGG: sbl:Sbal_3612 putative replication protein YP_001367448.1 KEGG: sdn:Sden_3265 hypothetical protein YP_001367450.1 KEGG: sbl:Sbal_3614 hypothetical protein YP_001367452.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: ent:Ent638_1011 putative phage repressor YP_001367453.1 KEGG: sbl:Sbal_3619 hypothetical protein YP_001367454.1 KEGG: sbl:Sbal_3621 hypothetical protein YP_001367456.1 KEGG: sbl:Sbal_3623 hypothetical protein YP_001367457.1 KEGG: sbl:Sbal_3624 hypothetical protein YP_001367458.1 KEGG: sbl:Sbal_3625 hypothetical protein YP_001367459.1 KEGG: sbl:Sbal_3626 hypothetical protein YP_001367460.1 KEGG: sbl:Sbal_3622 hypothetical protein YP_001367461.1 KEGG: sdn:Sden_3275 GP46 YP_001367462.1 KEGG: shw:Sputw3181_2526 hypothetical protein YP_001367463.1 PFAM: phage integrase family protein; KEGG: ecv:APECO1_2052 hypothetical protein YP_001367464.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing YP_001367465.1 PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; SMART: KH domain protein; KEGG: sbl:Sbal_3234 polyribonucleotide nucleotidyltransferase YP_001367466.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_3235 diguanylate cyclase/phosphodiesterase YP_001367467.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001367468.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs YP_001367469.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_001367470.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex YP_001367471.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_001367472.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_001367473.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: sbl:Sbal_3242 preprotein translocase, SecG subunit YP_001367474.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_001367475.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001367476.1 TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; KEGG: sbl:Sbal_3245 dihydropteroate synthase YP_001367477.1 KEGG: shw:Sputw3181_1369 hypothetical protein YP_001367478.1 KEGG: sbl:Sbal_3246 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001367479.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit YP_001367480.1 PFAM: protein of unknown function UPF0044; KEGG: shw:Sputw3181_1061 protein of unknown function UPF0044 YP_001367481.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_001367482.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane YP_001367483.1 KEGG: sbl:Sbal_3251 hypothetical protein YP_001367484.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sbl:Sbal_3252 transcription elongation factor GreA YP_001367485.1 KEGG: sbl:Sbal_3253 hypothetical protein YP_001367486.1 KEGG: sbl:Sbal_3254 lysozyme YP_001367487.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sbl:Sbal_3255 PepSY-associated TM helix domain protein YP_001367488.1 KEGG: sbl:Sbal_3256 hypothetical protein YP_001367489.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001367490.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001367491.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sbl:Sbal_3259 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001367492.1 KEGG: sbl:Sbal_3260 hypothetical protein YP_001367493.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001367494.1 PFAM: PhoH family protein; KEGG: sbl:Sbal_3262 PhoH family protein YP_001367495.1 PFAM: protein of unknown function UPF0054; KEGG: sbl:Sbal_3263 protein of unknown function UPF0054 YP_001367496.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: sbl:Sbal_3264 CBS domain containing protein YP_001367497.1 Transfers the fatty acyl group on membrane lipoproteins YP_001367498.1 KEGG: sbl:Sbal_3266 methylation site containing protein YP_001367499.1 KEGG: sbl:Sbal_3267 histidine kinase YP_001367500.1 PFAM: protein of unknown function DUF1451; KEGG: sbl:Sbal_3268 protein of unknown function DUF1451 YP_001367501.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_001367502.1 PFAM: Rare lipoprotein B; KEGG: sbl:Sbal_3270 rare lipoprotein B YP_001367503.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: sbl:Sbal_3271 DNA polymerase III, delta subunit YP_001367504.1 TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: sbl:Sbal_3272 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001367505.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: sbl:Sbal_3273 iojap-like protein YP_001367506.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_001367507.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: sbl:Sbal_3275 peptidoglycan glycosyltransferase YP_001367508.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: sbl:Sbal_3276 rod shape-determining protein RodA YP_001367509.1 TIGRFAM: lytic murein transglycosylase B; KEGG: sbl:Sbal_3277 lytic murein transglycosylase B YP_001367510.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: sbl:Sbal_3278 rare lipoprotein A YP_001367511.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: sbl:Sbal_3279 serine-type D-Ala-D-Ala carboxypeptidase YP_001367512.1 PFAM: protein of unknown function DUF493; KEGG: sbl:Sbal_3280 protein of unknown function DUF493 YP_001367513.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein YP_001367514.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001367515.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3283 ribosomal-protein-alanine acetyltransferase YP_001367516.1 KEGG: sbl:Sbal_3284 hypothetical protein YP_001367517.1 PFAM: Ferritin Dps family protein; KEGG: sbl:Sbal_3285 ferritin, Dps family protein YP_001367518.1 PFAM: protein of unknown function DUF1624; KEGG: sbl:Sbal_3286 protein of unknown function DUF1624 YP_001367519.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_3287 TonB-dependent siderophore receptor YP_001367520.1 KEGG: sbl:Sbal_3288 hypothetical protein YP_001367521.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sde:Sde_0686 ribosomal protein S21 YP_001367522.1 KEGG: pat:Patl_2680 major facilitator superfamily MFS_1 YP_001367523.1 KEGG: gfo:orf2124 membrane or secreted protein YP_001367524.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: yen:YE2917 UDP-glucose 4-epimerase YP_001367525.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+ symporter; KEGG: pha:PSHAa1768 sodium/hexose cotransport protein YP_001367526.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism YP_001367527.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P YP_001367528.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: sde:Sde_0684 DNA primase YP_001367529.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xac:XAC1310 TonB-dependent receptor YP_001367530.1 PFAM: periplasmic binding protein; KEGG: shw:Sputw3181_3807 periplasmic binding protein YP_001367531.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_3808 ABC transporter related YP_001367532.1 PFAM: transport system permease protein; KEGG: shw:Sputw3181_3809 transport system permease protein YP_001367533.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: spc:Sputcn32_3669 transport system permease protein YP_001367534.1 KEGG: spc:Sputcn32_3670 hypothetical protein YP_001367535.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: spc:Sputcn32_3671 TonB-dependent receptor YP_001367536.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_3813 ABC transporter-related protein YP_001367537.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_3814 ABC transporter related YP_001367538.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VFA0793 transcriptional regulators, LysR family YP_001367539.1 PFAM: alpha/beta hydrolase fold; KEGG: vfi:VFA0792 proline iminopeptidase YP_001367540.1 PFAM: helix-turn-helix domain protein; KEGG: yen:YE4129 hypothetical protein YP_001367541.1 PFAM: HipA domain protein; KEGG: yen:YE4128 hypothetical protein YP_001367542.1 PFAM: NUDIX hydrolase; KEGG: psa:PST_3475 NTP pyrophosphohydrolase YP_001367543.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shw:Sputw3181_1842 GCN5-related N-acetyltransferase YP_001367545.1 KEGG: vvu:VV1_2436 hypothetical protein YP_001367546.1 KEGG: shm:Shewmr7_2623 hypothetical protein YP_001367547.1 PFAM: KAP P-loop domain protein; KEGG: pha:PSHAa0207 hypothetical protein YP_001367548.1 KEGG: vco:VC0395_0918 hypothetical protein YP_001367549.1 KEGG: gfo:orf876 hypothetical protein YP_001367550.1 TIGRFAM: integron integrase; PFAM: phage integrase family protein; KEGG: son:SO2037 site-specific recombinase, phage integrase family YP_001367551.1 KEGG: sdn:Sden_3259 hypothetical protein YP_001367552.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_3609 transcriptional regulator, XRE family YP_001367553.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_3261 phage integrase YP_001367555.1 PFAM: replication P family protein; KEGG: sbl:Sbal_3611 replication P family protein YP_001367556.1 KEGG: sbl:Sbal_3612 putative replication protein YP_001367557.1 KEGG: sdn:Sden_3265 hypothetical protein YP_001367559.1 KEGG: sbl:Sbal_3614 hypothetical protein YP_001367560.1 KEGG: sdn:Sden_3267 hypothetical protein YP_001367561.1 PFAM: helix-turn-helix domain protein; peptidase S24 S26A and S26B; KEGG: sdn:Sden_3268 transciptional regulator YP_001367562.1 KEGG: pat:Patl_2747 hypothetical protein YP_001367563.1 KEGG: cps:CPS_0203 hypothetical protein YP_001367566.1 KEGG: sbl:Sbal_3619 hypothetical protein YP_001367567.1 KEGG: sbl:Sbal_3621 hypothetical protein YP_001367568.1 KEGG: sbl:Sbal_3624 hypothetical protein YP_001367569.1 KEGG: sbl:Sbal_3625 hypothetical protein YP_001367570.1 KEGG: sbl:Sbal_3626 hypothetical protein YP_001367571.1 KEGG: sbl:Sbal_3622 hypothetical protein YP_001367572.1 KEGG: sdn:Sden_3275 GP46 YP_001367573.1 KEGG: shm:Shewmr7_1017 hypothetical protein YP_001367574.1 PFAM: phage integrase family protein; KEGG: shm:Shewmr7_1016 phage integrase family protein YP_001367575.1 PFAM: SEC-C motif domain protein; KEGG: sbl:Sbal_3289 sec-C motif domain protein YP_001367576.1 KEGG: sbl:Sbal_3290 hypothetical protein YP_001367577.1 PFAM: 3'-5' exonuclease; KEGG: sbl:Sbal_3291 3'-5' exonuclease YP_001367578.1 PFAM: protein of unknown function DUF808; KEGG: sbl:Sbal_3292 protein of unknown function DUF808 YP_001367579.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway YP_001367580.1 SMART: PUA domain containing protein; KEGG: shw:Sputw3181_1012 PUA domain containing protein YP_001367581.1 KEGG: sbl:Sbal_3295 putative lipoprotein YP_001367582.1 PFAM: protein of unknown function DUF692; KEGG: sbl:Sbal_3296 protein of unknown function DUF692 YP_001367583.1 KEGG: sbl:Sbal_3297 hypothetical protein YP_001367584.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sbl:Sbal_3298 endonuclease/exonuclease/phosphatase YP_001367585.1 KEGG: sbl:Sbal_3299 hypothetical protein YP_001367586.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: sbl:Sbal_3300 magnesium transporter YP_001367587.1 PFAM: chemotaxis sensory transducer; KEGG: sbl:Sbal_3301 methyl-accepting chemotaxis sensory transducer YP_001367588.1 KEGG: sbl:Sbal_3302 extracellular solute-binding protein, family 3 YP_001367589.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_3303 pseudouridine synthase YP_001367590.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity YP_001367591.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers YP_001367592.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001367593.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_3307 peptidylprolyl isomerase, FKBP-type YP_001367594.1 PFAM: peptidase M48 Ste24p; KEGG: sbl:Sbal_3308 peptidase M48, Ste24p YP_001367595.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_3309 GCN5-related N-acetyltransferase YP_001367596.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_3310 DEAD/DEAH box helicase domain protein YP_001367597.1 KEGG: sbl:Sbal_3311 hypothetical protein YP_001367598.1 PFAM: response regulator receiver; KEGG: bja:blr0877 two-component response regulator YP_001367599.1 KEGG: son:SO1128 hypothetical protein YP_001367600.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion YP_001367601.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_001367602.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_3320 protein of unknown function DUF6, transmembrane YP_001367603.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sbl:Sbal_3321 YbaK/EbsC protein YP_001367604.1 KEGG: sbl:Sbal_3322 hypothetical protein YP_001367605.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001367606.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001367607.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sbl:Sbal_3325 xanthine/uracil/vitamin C permease YP_001367608.1 KEGG: she:Shewmr4_1472 hypothetical protein YP_001367609.1 PFAM: alpha/beta hydrolase fold; KEGG: bra:BRADO6091 putative alpha/beta hydrolase superfamily protein YP_001367610.1 KEGG: sbl:Sbal_0942 hypothetical protein YP_001367611.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sbl:Sbal_0941 peptidase M17, leucyl aminopeptidase domain protein YP_001367612.1 TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sbl:Sbal_0940 aminoacyl-histidine dipeptidase YP_001367613.1 KEGG: sbl:Sbal_0939 hypothetical protein YP_001367614.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0938 methyl-accepting chemotaxis sensory transducer YP_001367615.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0937 protein of unknown function DUF6, transmembrane YP_001367616.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shw:Sputw3181_3224 transcriptional regulator, LysR family YP_001367617.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function YP_001367618.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0934 methyl-accepting chemotaxis sensory transducer YP_001367619.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: sbl:Sbal_0933 bacterioferritin YP_001367620.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: sbl:Sbal_0932 bacterioferritin YP_001367621.1 PFAM: protein of unknown function DUF539; KEGG: sbl:Sbal_0931 protein of unknown function DUF539 YP_001367622.1 PFAM: ApbE family lipoprotein; KEGG: sbl:Sbal_0930 ApbE family lipoprotein YP_001367623.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367624.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol. YP_001367625.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm YP_001367626.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367627.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367628.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367629.1 PFAM: TonB-dependent receptor; KEGG: sbl:Sbal_0923 TonB-dependent receptor YP_001367630.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2 YP_001367631.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: sbl:Sbal_0921 TRAP dicarboxylate transporter-DctP subunit YP_001367632.1 PFAM: BolA family protein; KEGG: sbl:Sbal_0920 BolA family protein YP_001367633.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: sbl:Sbal_0919 2OG-Fe(II) oxygenase YP_001367634.1 PFAM: methyltransferase small; KEGG: sbl:Sbal_0918 rRNA (guanine-N(2)-)-methyltransferase YP_001367635.1 KEGG: sbl:Sbal_0917 hypothetical protein YP_001367636.1 KEGG: sbl:Sbal_0917 hypothetical protein YP_001367637.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: sbl:Sbal_0916 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001367638.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sbl:Sbal_0915 putative transcriptional regulator, GntR family YP_001367639.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sbl:Sbal_0914 cytochrome bd ubiquinol oxidase, subunit I YP_001367640.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: sbl:Sbal_0913 cytochrome d ubiquinol oxidase, subunit II YP_001367642.1 KEGG: sbl:Sbal_0911 GreA/GreB family elongation factor YP_001367643.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_0910 helix-turn-helix-domain containing protein, AraC type YP_001367644.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0909 protein of unknown function DUF6, transmembrane YP_001367645.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0908 methyl-accepting chemotaxis sensory transducer YP_001367646.1 KEGG: sbl:Sbal_0907 hypothetical protein YP_001367647.1 KEGG: sbl:Sbal_0906 ApbE family protein, putative YP_001367648.1 PFAM: FMN-binding domain protein; KEGG: sbl:Sbal_0905 FMN-binding domain protein YP_001367649.1 KEGG: sbl:Sbal_0904 hypothetical protein YP_001367650.1 PFAM: Na+ antiporter NhaC; KEGG: sbl:Sbal_0903 Na+/H+ antiporter NhaC YP_001367651.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_0902 pseudouridine synthase YP_001367652.1 KEGG: acb:A1S_1812 hypothetical protein YP_001367654.1 KEGG: sbl:Sbal_0898 hypothetical protein YP_001367655.1 PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: sbl:Sbal_0897 aromatic amino acid permease YP_001367656.1 GbpA; plays a role mediating bacterial attachment and colonization of zooplankton and/or intestinal epithelium; in Vibrio cholerae this protein probably binds directly N-acetylglucosamine residues in chitin, glycoproteins and lipids on intestinal epithelial cells YP_001367657.1 PFAM: protein of unknown function UPF0016; KEGG: sbl:Sbal_0895 protein of unknown function UPF0016 YP_001367658.1 PFAM: Catalase domain protein; KEGG: sbl:Sbal_0894 catalase YP_001367659.1 KEGG: sbl:Sbal_0893 hypothetical protein YP_001367660.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_0892 thioesterase superfamily protein YP_001367661.1 KEGG: sbl:Sbal_0891 hypothetical protein YP_001367662.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sbl:Sbal_0890 endonuclease/exonuclease/phosphatase YP_001367663.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_0889 peptidylprolyl isomerase, FKBP-type YP_001367664.1 PFAM: WD-40 repeat protein; KEGG: sbl:Sbal_0888 WD-40 repeat protein YP_001367665.1 PFAM: SlyX family protein; KEGG: sbl:Sbal_0887 SlyX family protein YP_001367666.1 TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; KEGG: sbl:Sbal_0886 peptide deformylase YP_001367667.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: sbl:Sbal_0885 tetratricopeptide TPR_2 repeat protein YP_001367668.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: sbl:Sbal_0884 membrane lipoprotein lipid attachment site YP_001367669.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sbl:Sbal_0883 aminopeptidase N YP_001367670.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0882 methyl-accepting chemotaxis sensory transducer YP_001367671.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_0881 diguanylate cyclase with PAS/PAC sensor YP_001367672.1 PFAM: protein of unknown function DUF72; KEGG: sbl:Sbal_0880 protein of unknown function DUF72 YP_001367673.1 KEGG: sbl:Sbal_0879 hypothetical protein YP_001367674.1 PFAM: phosphate transporter; KEGG: sbl:Sbal_0878 phosphate transporter YP_001367675.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: shw:Sputw3181_0926 helix-turn-helix-domain containing protein, AraC type YP_001367676.1 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group YP_001367677.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans YP_001367678.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_0876 thioesterase superfamily protein YP_001367679.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: sbl:Sbal_0875 catalase/peroxidase HPI YP_001367680.1 PFAM: carbon starvation protein CstA; KEGG: sbl:Sbal_0874 carbon starvation protein CstA YP_001367681.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1 YP_001367682.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: sbl:Sbal_0872 peptide chain release factor 2 YP_001367683.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sbl:Sbal_0871 formate dehydrogenase, alpha subunit YP_001367684.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: sbl:Sbal_0870 methyl-accepting chemotaxis sensory transducer YP_001367685.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: sbl:Sbal_0869 chromate transporter, chromate ion transporter (CHR) family YP_001367686.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA YP_001367687.1 PFAM: FAD dependent oxidoreductase; KEGG: sbl:Sbal_0867 FAD dependent oxidoreductase YP_001367688.1 PFAM: regulatory protein MarR; KEGG: sbl:Sbal_0866 transcriptional regulator, MarR family YP_001367689.1 PFAM: OsmC family protein; KEGG: sbl:Sbal_0865 OsmC family protein YP_001367690.1 KEGG: sbl:Sbal_0864 hypothetical protein YP_001367691.1 KEGG: sbl:Sbal_0863 hypothetical protein YP_001367692.1 KEGG: sbl:Sbal_0862 hypothetical protein YP_001367693.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 12; KEGG: sbl:Sbal_0861 methyltransferase type 12 YP_001367694.1 KEGG: sbl:Sbal_0860 hypothetical protein YP_001367695.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sbl:Sbal_0859 flavocytochrome c YP_001367696.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sbl:Sbal_0858 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001367697.1 PFAM: dienelactone hydrolase; KEGG: sbl:Sbal_0857 dienelactone hydrolase YP_001367698.1 KEGG: sbl:Sbal_0856 hypothetical protein YP_001367699.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0855 TonB-dependent receptor YP_001367700.1 KEGG: sbl:Sbal_0854 PepSY-associated TM helix YP_001367701.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sbl:Sbal_0853 PepSY-associated TM helix domain protein YP_001367702.1 KEGG: sbl:Sbal_0852 hypothetical protein YP_001367703.1 PFAM: Spermine synthase; KEGG: sbl:Sbal_0851 spermine synthase YP_001367704.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sbl:Sbal_0850 leucyl aminopeptidase YP_001367705.1 KEGG: sbl:Sbal_1382 transposase YP_001367706.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_1381 integrase, catalytic region YP_001367707.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sbl:Sbal_0849 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001367708.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: sbl:Sbal_0848 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001367709.1 KEGG: shw:Sputw3181_3278 hypothetical protein YP_001367710.1 KEGG: sbl:Sbal_0847 hypothetical protein YP_001367711.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0846 GCN5-related N-acetyltransferase YP_001367712.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sbl:Sbal_0845 single-stranded-DNA-specific exonuclease RecJ YP_001367713.1 KEGG: sbl:Sbal_0844 thiol:disulfide interchange protein DsbC YP_001367714.1 TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sbl:Sbal_0843 tyrosine recombinase XerD YP_001367715.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: sbl:Sbal_0842 branched-chain amino acid transport system II carrier protein YP_001367716.1 PFAM: methyltransferase small; KEGG: sbl:Sbal_0841 methyltransferase small YP_001367717.1 facilitates an early step in the assembly of the 50S subunit of the ribosome YP_001367718.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_0839 efflux transporter, RND family, MFP subunit YP_001367719.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_0838 acriflavin resistance protein YP_001367720.1 PFAM: Radical SAM domain protein; KEGG: sbl:Sbal_0837 radical SAM domain protein YP_001367721.1 KEGG: sbl:Sbal_0836 putative PAS/PAC sensor protein YP_001367722.1 KEGG: sbl:Sbal_0835 hypothetical protein YP_001367723.1 KEGG: sbl:Sbal_0834 hypothetical protein YP_001367724.1 PFAM: transcriptional regulator domain protein; KEGG: sbl:Sbal_0833 transcriptional regulator, CadC YP_001367725.1 PFAM: Citrate transporter; KEGG: sbl:Sbal_0832 citrate transporter YP_001367726.1 PFAM: protein of unknown function DUF481; KEGG: sbl:Sbal_0831 protein of unknown function DUF481 YP_001367727.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_001367728.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway YP_001367729.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate YP_001367730.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_001367731.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase YP_001367732.1 KEGG: slo:Shew_0484 hypothetical protein YP_001367733.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0774 GCN5-related N-acetyltransferase YP_001367734.1 KEGG: sbl:Sbal_0773 hypothetical protein YP_001367735.1 KEGG: sbl:Sbal_0772 acetyltransferase, GNAT family YP_001367736.1 KEGG: sbl:Sbal_0771 GGDEF domain protein YP_001367737.1 KEGG: sbl:Sbal_0770 hypothetical protein YP_001367738.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sbl:Sbal_0769 protein of unknown function DUF306, MetA and HslJ YP_001367739.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbl:Sbal_0768 sodium:dicarboxylate symporter YP_001367740.1 KEGG: sbl:Sbal_0767 hypothetical protein YP_001367741.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0766 GCN5-related N-acetyltransferase YP_001367742.1 KEGG: sbl:Sbal_0765 aromatic amino acid permease YP_001367743.1 PFAM: peptidase S45 penicillin amidase; KEGG: sbl:Sbal_0764 peptidase S45, penicillin amidase YP_001367744.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog YP_001367745.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: sbl:Sbal_0762 transcriptional regulator, MarR family YP_001367747.1 KEGG: har:HEAR3304 hypothetical protein; putative membrane protein YP_001367748.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367749.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol. YP_001367750.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm YP_001367751.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367752.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367753.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm YP_001367754.1 PFAM: aldo/keto reductase; KEGG: sbl:Sbal_0753 aldo/keto reductase YP_001367755.1 PFAM: MltA-interacting MipA family protein; KEGG: sbl:Sbal_0752 MltA-interacting MipA family protein YP_001367756.1 KEGG: sbl:Sbal_0751 hypothetical protein YP_001367757.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0750 integral membrane sensor signal transduction histidine kinase YP_001367758.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_0749 two component transcriptional regulator, winged helix family YP_001367759.1 KEGG: sbl:Sbal_0748 hypothetical protein YP_001367760.1 PFAM: MltA-interacting MipA family protein; KEGG: sbl:Sbal_0747 MltA-interacting MipA family protein YP_001367761.1 KEGG: sbl:Sbal_0746 hypothetical protein YP_001367762.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0745 TonB-dependent receptor, plug YP_001367763.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: shn:Shewana3_0809 methyl-accepting chemotaxis sensory transducer YP_001367764.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: sbl:Sbal_0743 cysteine desulfurases, SufS subfamily YP_001367765.1 PFAM: Fe-S metabolism associated SufE; KEGG: sbl:Sbal_0742 Fe-S metabolism associated SufE YP_001367766.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sbl:Sbal_0741 peptidase M19, renal dipeptidase YP_001367767.1 KEGG: sbl:Sbal_0740 hypothetical protein YP_001367768.1 KEGG: sbl:Sbal_0737 hypothetical protein YP_001367769.1 PFAM: protein of unknown function DUF1696; KEGG: sbl:Sbal_0735 protein of unknown function DUF1696 YP_001367770.1 PFAM: peptidase U32; KEGG: sbl:Sbal_0734 peptidase U32 YP_001367771.1 PFAM: pseudouridine synthase; KEGG: sbl:Sbal_0733 pseudouridylate synthase YP_001367772.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase YP_001367773.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: son:SO3800 serine protease, subtilase family YP_001367774.1 KEGG: sbl:Sbal_1382 transposase YP_001367775.1 PFAM: Integrase catalytic region; KEGG: sbl:Sbal_1381 integrase, catalytic region YP_001367776.1 PFAM: ABC-2 type transporter; KEGG: sbl:Sbal_0723 ABC-2 type transporter YP_001367777.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0722 ABC transporter related YP_001367778.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: sbl:Sbal_0721 hypoxanthine phosphoribosyltransferase YP_001367779.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: sbl:Sbal_0720 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001367780.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sbl:Sbal_0719 UDP-N-acetylmuramate YP_001367781.1 KEGG: sbl:Sbal_0718 hypothetical protein YP_001367782.1 KEGG: sbl:Sbal_0717 sterol desaturase family protein YP_001367783.1 KEGG: sbl:Sbal_0716 hypothetical protein YP_001367784.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: sbl:Sbal_0715 OmpA-like transmembrane domain protein YP_001367785.1 PFAM: Uncharacterized lipoprotein; KEGG: sbl:Sbal_0714 uncharacterized lipoprotein YP_001367786.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sbl:Sbal_0713 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_001367787.1 KEGG: sbl:Sbal_0712 hypothetical protein YP_001367788.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0711 major facilitator superfamily MFS_1 YP_001367789.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_001367790.1 PFAM: VanZ family protein; KEGG: sbl:Sbal_0709 VanZ family protein YP_001367791.1 TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; KEGG: sbl:Sbal_0708 2-dehydropantoate 2-reductase YP_001367792.1 PFAM: nitrogen regulatory protein P-II; KEGG: sbl:Sbal_0707 nitrogen regulatory protein P-II YP_001367793.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sbl:Sbal_0706 ammonium transporter YP_001367794.1 PFAM: EAL domain protein; KEGG: sbl:Sbal_0705 diguanylate phosphodiesterase YP_001367795.1 KEGG: sbl:Sbal_0704 hypothetical protein YP_001367796.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001367797.1 PFAM: protein of unknown function DUF819; KEGG: sbl:Sbal_0702 protein of unknown function DUF819 YP_001367798.1 KEGG: sbl:Sbal_0701 hypothetical protein YP_001367799.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: sbl:Sbal_0700 invasion gene expression up-regulator, SirB YP_001367800.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0699 GCN5-related N-acetyltransferase YP_001367801.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: sbl:Sbal_0697 modification methylase, HemK family YP_001367802.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001367803.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_001367804.1 PFAM: outer membrane lipoprotein LolB; KEGG: sbl:Sbal_0694 outer membrane lipoprotein LolB YP_001367805.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_001367806.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_001367807.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0691 methyl-accepting chemotaxis sensory transducer YP_001367808.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_0690 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001367809.1 KEGG: sbl:Sbal_0689 hypothetical protein YP_001367810.1 KEGG: sbl:Sbal_0688 hypothetical protein YP_001367811.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_0687 pseudouridine synthase YP_001367812.1 KEGG: sbl:Sbal_0686 nodulation protein L YP_001367813.1 PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sbl:Sbal_0685 endothelin-converting enzyme 1 YP_001367814.1 KEGG: sbl:Sbal_0684 hypothetical protein YP_001367815.1 KEGG: sbl:Sbal_0683 hypothetical protein YP_001367816.1 KEGG: sbl:Sbal_0682 hypothetical protein YP_001367817.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_0681 glutathione S-transferase, N-terminal domain YP_001367818.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shn:Shewana3_0754 TonB-dependent receptor YP_001367819.1 PFAM: membrane-flanked domain; KEGG: sbl:Sbal_0679 membrane-flanked domain YP_001367820.1 KEGG: sbl:Sbal_0678 putative manganese transporter YP_001367821.1 PFAM: protein of unknown function DUF1456; KEGG: sbl:Sbal_0677 protein of unknown function DUF1456 YP_001367822.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate YP_001367823.1 KEGG: sbl:Sbal_0675 hypothetical protein YP_001367824.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sbl:Sbal_0674 phosphoesterase, PA-phosphatase related YP_001367825.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: Tetratricopeptide domain protein; KEGG: shn:Shewana3_0747 diguanylate cyclase YP_001367826.1 SMART: extracellular solute-binding protein family 3; KEGG: she:Shewmr4_3192 extracellular solute-binding protein, family 3 YP_001367827.1 TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: sbl:Sbal_0669 putative iron-sulfur cluster binding protein YP_001367828.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_001367829.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0666 transcriptional regulator, LysR family YP_001367830.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sbl:Sbal_0664 putative signal transduction protein YP_001367831.1 KEGG: spc:Sputcn32_3175 hypothetical protein YP_001367832.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shw:Sputw3181_0767 TonB-dependent siderophore receptor YP_001367833.1 KEGG: sbl:Sbal_0662 hypothetical protein YP_001367834.1 KEGG: sbl:Sbal_0661 hypothetical protein YP_001367835.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific YP_001367836.1 catalyzes the formation of D-ribose 5-phosphate from ribose YP_001367837.1 TIGRFAM: Azurin; PFAM: blue (type 1) copper domain protein; KEGG: sbl:Sbal_0658 azurin YP_001367838.1 KEGG: sbl:Sbal_0657 hypothetical protein YP_001367839.1 KEGG: sbl:Sbal_0654 hypothetical protein YP_001367840.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbl:Sbal_0653 glycerophosphoryl diester phosphodiesterase YP_001367841.1 KEGG: sbl:Sbal_0652 hypoxanthine-guanine phosphoribosyltransferase YP_001367842.1 PFAM: Alkaline phosphatase; KEGG: sbl:Sbal_0651 alkaline phosphatase YP_001367843.1 PFAM: CBS domain containing protein; KEGG: sbl:Sbal_0650 CBS domain containing protein YP_001367844.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sbl:Sbal_0649 MATE efflux family protein YP_001367845.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sbl:Sbal_0648 alpha/beta hydrolase fold-3 domain protein YP_001367846.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein YP_001367847.1 KEGG: saz:Sama_2729 hypothetical protein YP_001367848.1 TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: von Willebrand factor type A; Domain of unknown function DUF1973; KEGG: she:Shewmr4_3393 putative outer membrane adhesin like protein YP_001367849.1 KEGG: shm:Shewmr7_0559 hypothetical protein YP_001367850.1 PFAM: protein of unknown function DUF985; KEGG: sbl:Sbal_0646 protein of unknown function DUF985 YP_001367851.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_0645 diguanylate cyclase YP_001367852.1 PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: sbl:Sbal_0643 protein of unknown function DUF181 YP_001367853.1 KEGG: sbl:Sbal_0642 hypothetical protein YP_001367854.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: sbl:Sbal_0641 methyl-accepting chemotaxis sensory transducer YP_001367855.1 KEGG: sbl:Sbal_0640 hypothetical protein YP_001367856.1 KEGG: sbl:Sbal_0639 hypothetical protein YP_001367857.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: son:SO0791 transcriptional regulator, LysR family YP_001367858.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO0789 short chain dehydrogenase YP_001367859.1 KEGG: spc:Sputcn32_3203 hypothetical protein YP_001367860.1 PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: sbl:Sbal_0628 tRNA synthetase, class II (G, H, P and S) YP_001367861.1 KEGG: she:Shewmr4_3326 hypothetical protein YP_001367862.1 KEGG: saz:Sama_2355 conserved hypothetical protein YP_001367863.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_001367864.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor YP_001367865.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_001367866.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sbl:Sbal_0616 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001367867.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sbl:Sbal_0615 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_001367868.1 TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: sbl:Sbal_0614 YecA family protein YP_001367869.1 PFAM: protein of unknown function DUF710; KEGG: sbl:Sbal_0613 protein of unknown function DUF710 YP_001367870.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: sbl:Sbal_0612 5-formyltetrahydrofolate cyclo-ligase YP_001367871.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_0611 short-chain dehydrogenase/reductase SDR YP_001367872.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: sbl:Sbal_0610 putative thiol-disulphide oxidoreductase DCC YP_001367873.1 oxidizes malate to oxaloacetate YP_001367874.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes YP_001367875.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: sbl:Sbal_0607 NAD-dependent epimerase/dehydratase YP_001367876.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0606 transcriptional regulator, LysR family YP_001367877.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: sbl:Sbal_0605 Dyp-type peroxidase family YP_001367878.1 TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; KEGG: sbl:Sbal_0604 gamma-glutamyltransferase YP_001367879.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_0603 ABC transporter related YP_001367880.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_0602 binding-protein-dependent transport systems inner membrane component YP_001367881.1 PFAM: extracellular solute-binding protein family 1; KEGG: shn:Shewana3_3517 extracellular solute-binding protein, family 1 YP_001367882.1 KEGG: sbl:Sbal_0811 hypothetical protein YP_001367883.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_0810 glutathione S-transferase, N-terminal domain YP_001367884.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sbl:Sbal_0809 oxidoreductase FAD/NAD(P)-binding domain protein YP_001367885.1 KEGG: sbl:Sbal_0808 hypothetical protein YP_001367886.1 PFAM: Phosphoglycerate mutase; KEGG: sbl:Sbal_0807 phosphoglycerate mutase YP_001367887.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: sbl:Sbal_0806 ferredoxin-dependent glutamate synthase YP_001367888.1 KEGG: sbl:Sbal_0805 hypothetical protein YP_001367889.1 KEGG: sbl:Sbal_0804 hypothetical protein YP_001367890.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0803 ABC transporter related YP_001367891.1 KEGG: sbl:Sbal_0802 hypothetical protein YP_001367892.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_001367893.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_0800 tetratricopeptide TPR_2 repeat protein YP_001367894.1 KEGG: sbl:Sbal_0799 hypothetical protein YP_001367895.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: sbl:Sbal_0798 ammonium transporter YP_001367896.1 PFAM: nitrogen regulatory protein P-II; KEGG: sbl:Sbal_0797 nitrogen regulatory protein P-II YP_001367897.1 PFAM: isochorismatase hydrolase; KEGG: sbl:Sbal_0796 isochorismatase hydrolase YP_001367898.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552 YP_001367899.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sbl:Sbal_0793 integral membrane sensor signal transduction histidine kinase YP_001367900.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sbl:Sbal_0792 two component transcriptional regulator, LuxR family YP_001367901.1 PFAM: uncharacterised conserved protein UCP006287; KEGG: sbl:Sbal_0791 uncharacterised conserved protein UCP006287 YP_001367902.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: sbl:Sbal_0790 Mg2+ transporter protein, CorA family protein YP_001367903.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: sbl:Sbal_0789 succinylglutamate desuccinylase/aspartoacylase YP_001367904.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive YP_001367905.1 KEGG: sbl:Sbal_0787 hypothetical protein YP_001367906.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_0786 two component transcriptional regulator, winged helix family YP_001367907.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: sbl:Sbal_0785 peptidase S9B, dipeptidylpeptidase IV domain protein YP_001367908.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate YP_001367910.1 KEGG: sbl:Sbal_0782 hypothetical protein YP_001367911.1 KEGG: sbl:Sbal_0781 hypothetical protein YP_001367912.1 PFAM: Uncharacterized protein UPF0114; KEGG: son:SO3997 hypothetical protein YP_001367913.1 KEGG: shn:Shewana3_0643 hypothetical protein YP_001367914.1 PFAM: sodium:dicarboxylate symporter; KEGG: spc:Sputcn32_0671 sodium:dicarboxylate symporter YP_001367915.1 KEGG: sbl:Sbal_0597 hypothetical protein YP_001367916.1 KEGG: sbl:Sbal_0596 hypothetical protein YP_001367917.1 KEGG: spc:Sputcn32_0668 hypothetical protein YP_001367918.1 KEGG: sbl:Sbal_0594 hypothetical protein YP_001367919.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: sbl:Sbal_0593 response regulator receiver protein YP_001367920.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0592 integral membrane sensor signal transduction histidine kinase YP_001367921.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_0591 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001367922.1 PFAM: Polysulphide reductase NrfD; KEGG: sbl:Sbal_0590 polysulphide reductase, NrfD YP_001367923.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sbl:Sbal_0589 molybdopterin dinucleotide-binding region YP_001367924.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_0588 methyl-accepting chemotaxis sensory transducer YP_001367925.1 KEGG: sbl:Sbal_0587 hypothetical protein YP_001367926.1 KEGG: sbl:Sbal_0586 hypothetical protein YP_001367927.1 KEGG: sbl:Sbal_0585 hypothetical protein YP_001367928.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: shw:Sputw3181_3517 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001367929.1 TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sbl:Sbal_0583 penicillin-binding protein 1B YP_001367930.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_0582 ATP-dependent helicase HrpB YP_001367931.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sbl:Sbal_0581 diguanylate cyclase/phosphodiesterase YP_001367932.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: sbl:Sbal_0580 2'-5' RNA ligase YP_001367933.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_0579 Sel1 domain protein repeat-containing protein YP_001367934.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons YP_001367935.1 KEGG: sbl:Sbal_0577 hypothetical protein YP_001367936.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sbl:Sbal_0576 two component transcriptional regulator, winged helix family YP_001367937.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0575 integral membrane sensor signal transduction histidine kinase YP_001367938.1 KEGG: sbl:Sbal_0574 hypothetical protein YP_001367939.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH YP_001367940.1 PFAM: arginine N-succinyltransferase beta subunit; KEGG: sbl:Sbal_0572 arginine N-succinyltransferase YP_001367941.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate YP_001367942.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sbl:Sbal_0570 alpha/beta hydrolase fold-3 domain protein YP_001367943.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sbl:Sbal_0569 putative signal transduction protein YP_001367944.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: sbl:Sbal_0568 peptidase S9, prolyl oligopeptidase active site domain protein YP_001367945.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sbl:Sbal_0567 glutamine amidotransferase of anthranilate synthase YP_001367946.1 PFAM: Stringent starvation protein B; KEGG: sbl:Sbal_0566 stringent starvation protein B YP_001367947.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation YP_001367948.1 PFAM: cytochrome c1; KEGG: spc:Sputcn32_3274 cytochrome c1 YP_001367949.1 PFAM: Cytochrome b/b6 domain; KEGG: son:SO0609 ubiquinol-cytochrome c reductase, cytochrome b YP_001367950.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sbl:Sbal_0562 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001367951.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: sbl:Sbal_0561 HflC protein YP_001367952.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: sbl:Sbal_0560 HflK protein YP_001367953.1 PFAM: GTP-binding protein HSR1-related; KEGG: sbl:Sbal_0559 GTP-binding protein, HSR1-related YP_001367954.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: sbl:Sbal_0558 RNA chaperone Hfq YP_001367955.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_001367956.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex YP_001367957.1 PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: sbl:Sbal_0555 N-acetylmuramoyl-L-alanine amidase YP_001367958.1 PFAM: protein of unknown function UPF0079; KEGG: sbl:Sbal_0554 protein of unknown function UPF0079 YP_001367959.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: sbl:Sbal_0553 carbohydrate kinase, YjeF related protein YP_001367960.1 KEGG: sbl:Sbal_0552 hypothetical protein YP_001367961.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_001367962.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity YP_001367963.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine YP_001367964.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0548 protein of unknown function DUF6, transmembrane YP_001367965.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sbl:Sbal_0547 MscS mechanosensitive ion channel YP_001367966.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbl:Sbal_0546 glycerophosphoryl diester phosphodiesterase YP_001367967.1 KEGG: sbl:Sbal_0545 hypothetical protein YP_001367968.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sbl:Sbal_0544 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001367969.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: sbl:Sbal_0543 methyl-accepting chemotaxis sensory transducer YP_001367970.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sbl:Sbal_0542 BFD domain protein (2Fe-2S)-binding domain protein YP_001367971.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide YP_001367972.1 KEGG: sbl:Sbal_0540 hypothetical protein YP_001367973.1 PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: sbl:Sbal_0539 protein kinase YP_001367974.1 KEGG: sbl:Sbal_0538 hypothetical protein YP_001367975.1 KEGG: sbl:Sbal_0537 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001367976.1 PFAM: PhoH family protein; SMART: AAA ATPase; Nucleotide binding protein PINc; KEGG: sbl:Sbal_0536 PhoH family protein YP_001367977.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA YP_001367978.1 KEGG: sbl:Sbal_0534 hypothetical protein YP_001367979.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001367980.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_0532 response regulator receiver protein YP_001367981.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_0531 diguanylate cyclase YP_001367982.1 PFAM: protein of unknown function DUF1260; KEGG: sbl:Sbal_0530 protein of unknown function DUF1260 YP_001367983.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_0529 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001367984.1 PFAM: ABC-3 protein; KEGG: sbl:Sbal_0528 ABC-3 protein YP_001367985.1 PFAM: periplasmic solute binding protein; KEGG: sbl:Sbal_0527 periplasmic solute binding protein YP_001367986.1 KEGG: sbl:Sbal_0526 hypothetical protein YP_001367987.1 KEGG: sbl:Sbal_0525 hypothetical protein YP_001367988.1 KEGG: sbl:Sbal_0524 hypothetical protein YP_001367989.1 KEGG: sbl:Sbal_0523 hypothetical protein YP_001367990.1 PFAM: MscS Mechanosensitive ion channel; KEGG: shn:Shewana3_0561 MscS mechanosensitive ion channel YP_001367991.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate YP_001367992.1 PFAM: aldo/keto reductase; KEGG: sbl:Sbal_0519 aldo/keto reductase YP_001367993.1 PFAM: MaoC domain protein dehydratase; KEGG: sbl:Sbal_0518 MaoC domain protein dehydratase YP_001367994.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_0517 methyltransferase type 11 YP_001367995.1 PFAM: GumN family protein; KEGG: sbl:Sbal_0516 GumN family protein YP_001367996.1 KEGG: sbl:Sbal_0515 hypothetical protein YP_001367997.1 PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: sbl:Sbal_0514 diguanylate cyclase/phosphodiesterase YP_001367998.1 KEGG: sbl:Sbal_0513 hypothetical protein YP_001367999.1 KEGG: sbl:Sbal_0512 hypothetical protein YP_001368000.1 KEGG: sbl:Sbal_0511 hypothetical protein YP_001368001.1 KEGG: sbl:Sbal_0510 hypothetical protein YP_001368002.1 KEGG: sbl:Sbal_0509 hypothetical protein YP_001368003.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_0508 response regulator receiver protein YP_001368004.1 PFAM: histone family protein DNA-binding protein; KEGG: shw:Sputw3181_0616 histone family protein DNA-binding protein YP_001368005.1 KEGG: sbl:Sbal_0506 hypothetical protein YP_001368006.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: sbl:Sbal_0505 alpha-L-glutamate ligases, RimK family YP_001368007.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: sbl:Sbal_0504 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_001368008.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_0503 response regulator receiver protein YP_001368009.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_0502 multi-sensor signal transduction histidine kinase YP_001368010.1 KEGG: sbl:Sbal_0501 hypothetical protein YP_001368011.1 KEGG: sbl:Sbal_0500 hypothetical protein YP_001368012.1 PFAM: protein of unknown function DUF1704; KEGG: sbl:Sbal_0499 protein of unknown function DUF1704 YP_001368013.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sbl:Sbal_0498 amino acid carrier protein YP_001368014.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: son:SO0541 metallo-beta-lactamase family protein YP_001368015.1 KEGG: sbl:Sbal_0496 hypothetical protein YP_001368016.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0495 major facilitator superfamily MFS_1 YP_001368017.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate YP_001368018.1 KEGG: sbl:Sbal_0493 redox-active disulfide protein 2 YP_001368019.1 PFAM: permease; KEGG: sbl:Sbal_0492 permease YP_001368020.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: son:SO0534 arsenical pump membrane protein, putative YP_001368021.1 PFAM: regulatory protein ArsR; KEGG: sbl:Sbal_0491 regulatory protein, ArsR YP_001368022.1 KEGG: shn:Shewana3_3784 conserved hypothetical protein YP_001368023.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sbl:Sbal_0488 transcriptional regulator, AraC family YP_001368024.1 PFAM: isochorismatase hydrolase; KEGG: sbl:Sbal_0487 isochorismatase hydrolase YP_001368025.1 KEGG: sbl:Sbal_0486 radical SAM domain protein YP_001368027.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sbl:Sbal_0485 antibiotic biosynthesis monooxygenase YP_001368028.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0484 GCN5-related N-acetyltransferase YP_001368029.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0483 drug resistance transporter, EmrB/QacA subfamily YP_001368030.1 PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_0482 secretion protein HlyD family protein YP_001368031.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0481 transcriptional regulator, LysR family YP_001368032.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock YP_001368033.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sbl:Sbal_0479 antibiotic biosynthesis monooxygenase YP_001368034.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_0478 heavy metal efflux pump, CzcA family YP_001368035.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: shw:Sputw3181_0599 efflux transporter, RND family, MFP subunit YP_001368036.1 KEGG: shw:Sputw3181_0598 outer membrane efflux protein YP_001368037.1 KEGG: sbl:Sbal_0474 hypothetical protein YP_001368038.1 KEGG: sbl:Sbal_0473 hypothetical protein YP_001368039.1 KEGG: sbl:Sbal_0472 hypothetical protein YP_001368040.1 PFAM: Class I peptide chain release factor; KEGG: sbl:Sbal_0471 class I peptide chain release factor YP_001368041.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_001368042.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sbl:Sbal_0469 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001368043.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbl:Sbal_0468 short-chain dehydrogenase/reductase SDR YP_001368044.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0467 major facilitator superfamily MFS_1 YP_001368045.1 KEGG: sbl:Sbal_0466 hypothetical protein YP_001368046.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: sbl:Sbal_0465 UbiD family decarboxylase YP_001368047.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin YP_001368048.1 KEGG: rsh:Rsph17029_3190 hypothetical protein YP_001368049.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: son:SO0990 urease domain protein YP_001368050.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: son:SO0989 transcriptional regulator, LysR family YP_001368051.1 KEGG: sbl:Sbal_0458 conserved hypothetical flavoprotein oxygenase YP_001368052.1 PFAM: fatty acid cistrans isomerase; KEGG: sbl:Sbal_0451 fatty acid cistrans isomerase YP_001368053.1 PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sbl:Sbal_0450 endothelin-converting enzyme 1 YP_001368054.1 PFAM: transcriptional regulator domain protein; KEGG: shm:Shewmr7_3532 transcriptional regulator, CadC YP_001368055.1 KEGG: shw:Sputw3181_0584 copper ABC transporter, permease protein YP_001368056.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_0583 ABC transporter related YP_001368057.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: son:SO0486 copper ABC transporter, periplasmic copper-binding protein YP_001368058.1 PFAM: NosL family protein; KEGG: son:SO0485 NosL protein YP_001368059.1 PFAM: Polysulphide reductase NrfD; KEGG: son:SO0484 formate-dependent nitrite reductase, NrfD protein YP_001368060.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: son:SO0483 formate-dependent nitrite reductase, NrfC protein YP_001368061.1 KEGG: shm:Shewmr7_3539 formate-dependent nitrite reductase, NrfG protein YP_001368062.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: son:SO0481 peptidyl-prolyl cis-trans isomerase, FKBP-type YP_001368063.1 SMART: Rhodanese domain protein; KEGG: shm:Shewmr7_3541 rhodanese domain protein YP_001368064.1 KEGG: shn:Shewana3_0489 cytochrome c, putative YP_001368065.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF YP_001368066.1 PFAM: cytochrome C biogenesis protein; KEGG: shn:Shewana3_0487 cytochrome c biogenesis protein YP_001368067.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shw:Sputw3181_0574 redoxin domain protein YP_001368068.1 KEGG: sbl:Sbal_0449 hypothetical protein YP_001368069.1 KEGG: shn:Shewana3_0484 transcriptional regulator, XRE family YP_001368070.1 KEGG: shn:Shewana3_0483 hypothetical protein YP_001368071.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: shn:Shewana3_0482 peptidase S9, prolyl oligopeptidase active site domain protein YP_001368072.1 KEGG: sbl:Sbal_0448 putative mitomycin resistance protein YP_001368073.1 PFAM: protein of unknown function UPF0118; KEGG: sbl:Sbal_0447 protein of unknown function UPF0118 YP_001368074.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: sbl:Sbal_0446 redoxin domain protein YP_001368075.1 PFAM: dihydroorotate dehydrogenase; 2-nitropropane dioxygenase NPD; KEGG: sbl:Sbal_0445 2-nitropropane dioxygenase, NPD YP_001368076.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_0444 glyoxalase/bleomycin resistance protein/dioxygenase YP_001368077.1 periplasmic sensory protein associated with the TorRS two-component regulatory system YP_001368078.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway YP_001368079.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair. YP_001368081.1 KEGG: sbl:Sbal_0440 hypothetical protein YP_001368082.1 PFAM: NUDIX hydrolase; KEGG: sbl:Sbal_0439 NUDIX hydrolase YP_001368083.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: sbl:Sbal_0438 protein of unknown function, zinc metallopeptidase putative YP_001368084.1 KEGG: sbl:Sbal_0437 hypothetical protein YP_001368085.1 KEGG: sbl:Sbal_0436 hypothetical protein YP_001368086.1 PFAM: protein of unknown function DUF853 NPT hydrolase putative; KEGG: sbl:Sbal_0435 protein of unknown function DUF853, NPT hydrolase putative YP_001368087.1 KEGG: sbl:Sbal_0434 hypothetical protein YP_001368088.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: sbl:Sbal_0433 TRAP transporter solute receptor, TAXI family YP_001368089.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sbl:Sbal_0432 TRAP transporter, 4TM/12TM fusion protein YP_001368090.1 PFAM: Domain of unknown function DUF1850; KEGG: sbl:Sbal_0431 hypothetical protein YP_001368091.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: sbl:Sbal_0430 diguanylate cyclase with PAS/PAC sensor YP_001368092.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: sbl:Sbal_0429 peptidylprolyl isomerase, FKBP-type YP_001368093.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sbl:Sbal_0428 thioredoxin YP_001368094.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: sbl:Sbal_0427 anion transporter YP_001368095.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0425 major facilitator superfamily MFS_1 YP_001368096.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: sbl:Sbal_0424 pseudouridine synthase YP_001368097.1 PFAM: band 7 protein; KEGG: sbl:Sbal_0423 band 7 protein YP_001368098.1 PFAM: permease; KEGG: sbl:Sbal_0422 permease YP_001368099.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators YP_001368100.1 involved in de novo purine biosynthesis YP_001368101.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis YP_001368102.1 PFAM: transposase IS4 family protein; KEGG: sbl:Sbal_0665 transposase, IS4 family protein YP_001368103.1 KEGG: sbl:Sbal_0418 hypothetical protein YP_001368104.1 KEGG: sbl:Sbal_0417 hypothetical protein YP_001368105.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sbl:Sbal_0416 short-chain dehydrogenase/reductase SDR YP_001368106.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: shw:Sputw3181_0538 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001368107.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III YP_001368108.1 KEGG: sbl:Sbal_0412 hypothetical protein YP_001368109.1 binds specifically to the major sigma factor sigma 70; active in stationary phase YP_001368110.1 KEGG: spc:Sputcn32_3812 ISSod10, transposase OrfA YP_001368111.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate YP_001368112.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate YP_001368113.1 KEGG: sbl:Sbal_3907 hypothetical protein YP_001368114.1 PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sbl:Sbal_3908 endothelin-converting enzyme 1 YP_001368115.1 PFAM: surface antigen (D15); Patatin; surface antigen variable number repeat protein; KEGG: sbl:Sbal_3909 patatin YP_001368116.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_3910 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001368117.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001368118.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sbl:Sbal_3912 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001368119.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_001368120.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex YP_001368121.1 involved in regulation of beta-lactamase; putative signaling protein YP_001368122.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: sbl:Sbal_3916 N-acetylmuramoyl-L-alanine amidase, family 2 YP_001368123.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; KEGG: sbl:Sbal_3917 nicotinate-nucleotide pyrophosphorylase YP_001368124.1 KEGG: she:Shewmr4_0422 methylation site containing protein YP_001368125.1 PFAM: O-antigen polymerase; KEGG: slo:Shew_3437 O-antigen polymerase YP_001368126.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: sbl:Sbal_3919 type IV-A pilus assembly ATPase PilB YP_001368127.1 PFAM: type II secretion system protein; KEGG: sbl:Sbal_3920 type II secretion system protein YP_001368128.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: sbl:Sbal_3921 prepilin peptidase YP_001368129.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis YP_001368130.1 PFAM: protein of unknown function DUF1342; KEGG: sbl:Sbal_3923 protein of unknown function DUF1342 YP_001368131.1 PFAM: protein of unknown function DUF329; KEGG: sbl:Sbal_3924 protein of unknown function DUF329 YP_001368132.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: sbl:Sbal_3925 mutator MutT protein YP_001368133.1 PFAM: Thioredoxin domain; KEGG: sbl:Sbal_3926 hypothetical protein YP_001368134.1 PFAM: Ppx/GppA phosphatase; KEGG: sbl:Sbal_3927 Ppx/GppA phosphatase YP_001368135.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation YP_001368136.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sbl:Sbal_3929 thioredoxin YP_001368137.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001368138.1 KEGG: son:SO0404 hypothetical protein YP_001368139.1 KEGG: son:SO0403 hypothetical protein YP_001368140.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spc:Sputcn32_3435 transcriptional regulator, LysR family YP_001368141.1 TIGRFAM: Alcohol dehydrogenase. zinc-binding type 1; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sbl:Sbal_3932 alcohol dehydrogenase, zinc-binding domain protein YP_001368142.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sbl:Sbal_3933 antibiotic biosynthesis monooxygenase YP_001368143.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB YP_001368144.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB YP_001368145.1 PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sbl:Sbal_3936 fumarate reductase respiratory complex, transmembrane subunit YP_001368146.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit YP_001368147.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_001368148.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; dihydroorotate dehydrogenase; KEGG: sbl:Sbal_3939 putative TIM-barrel protein, nifR3 family YP_001368149.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription YP_001368150.1 PFAM: UvrD/REP helicase; DNA topoisomerase type IA zn finger domain protein; KEGG: sbl:Sbal_3941 UvrD/REP helicase YP_001368151.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: sbl:Sbal_3989 hemerythrin HHE cation binding domain protein YP_001368152.1 PFAM: AAA-4 family protein; KEGG: sbl:Sbal_3990 putative transcriptional regulator YP_001368153.1 PFAM: HupE/UreJ protein; KEGG: sbl:Sbal_3991 HupE/UreJ protein YP_001368154.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_3992 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001368155.1 TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: sbl:Sbal_3993 tyrosine recombinase XerC YP_001368156.1 PFAM: protein of unknown function DUF484; KEGG: sbl:Sbal_3994 protein of unknown function DUF484 YP_001368157.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate YP_001368158.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: sbl:Sbal_3996 diaminopimelate decarboxylase YP_001368159.1 KEGG: sbl:Sbal_3997 hypothetical protein YP_001368160.1 PFAM: Frataxin family protein; KEGG: sbl:Sbal_3998 frataxin family protein YP_001368161.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP YP_001368162.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_001368163.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: sbl:Sbal_4001 uroporphyrinogen III synthase HEM4 YP_001368164.1 PFAM: protein of unknown function DUF513 hemX; KEGG: sbl:Sbal_4002 protein of unknown function DUF513, HemX YP_001368165.1 PFAM: HemY domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: sbl:Sbal_4003 HemY domain protein YP_001368166.1 TIGRFAM: YD repeat protein; putative outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; WD40 domain protein beta Propeller; KEGG: shn:Shewana3_0382 putative outer membrane adhesin like proteiin YP_001368167.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: sbl:Sbal_4005 ABC transporter related YP_001368168.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_4006 type I secretion membrane fusion protein, HlyD family YP_001368169.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: sbl:Sbal_4007 type I secretion outer membrane protein, TolC family YP_001368170.1 PFAM: OmpA/MotB domain protein; KEGG: sbl:Sbal_4008 OmpA/MotB domain protein YP_001368171.1 KEGG: sbl:Sbal_4009 hypothetical protein YP_001368172.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sbl:Sbal_4010 diguanylate cyclase/phosphodiesterase YP_001368173.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: shw:Sputw3181_3738 diguanylate cyclase/phosphodiesterase with GAF sensor YP_001368174.1 TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: sbl:Sbal_4012 ATP-dependent DNA helicase Rep YP_001368175.1 PFAM: protein of unknown function DUF526; KEGG: sbl:Sbal_4013 protein of unknown function DUF526 YP_001368176.1 KEGG: sbl:Sbal_4014 hypothetical protein YP_001368177.1 KEGG: sbl:Sbal_4015 hypothetical protein YP_001368178.1 PFAM: protein of unknown function DUF1006; KEGG: sbl:Sbal_4016 protein of unknown function DUF1006 YP_001368179.1 KEGG: shn:Shewana3_0366 conserved hypothetical protein YP_001368180.1 PFAM: Inner membrane CreD family protein; KEGG: sbl:Sbal_4019 inner membrane CreD family protein YP_001368181.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sbl:Sbal_4020 phosphoesterase, PA-phosphatase related YP_001368182.1 KEGG: sbl:Sbal_4021 ABC-type amino acid transport/signal transduction system YP_001368183.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sbl:Sbal_4022 putative transcriptional regulator, AsnC family YP_001368184.1 PFAM: sodium:neurotransmitter symporter; KEGG: sbl:Sbal_4023 sodium:neurotransmitter symporter YP_001368185.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: sbl:Sbal_4024 import inner membrane translocase, subunit Tim44 YP_001368187.1 KEGG: son:SO1128 hypothetical protein YP_001368188.1 KEGG: sbl:Sbal_4026 hypothetical protein YP_001368189.1 PFAM: aminotransferase class V; KEGG: sbl:Sbal_4027 alanine--glyoxylate transaminase YP_001368190.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway YP_001368191.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001368192.1 PFAM: amino acid-binding ACT domain protein; KEGG: sbl:Sbal_4030 amino acid-binding ACT domain protein YP_001368193.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit YP_001368194.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001368195.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate YP_001368196.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: sbl:Sbal_4034 protein of unknown function DUF21 YP_001368197.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: sbl:Sbal_4036 diguanylate cyclase YP_001368198.1 KEGG: sbl:Sbal_4037 periplasmic sugar-binding protein, putative YP_001368199.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_4042 Mg chelatase, subunit ChlI YP_001368200.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_4043 phospholipid/glycerol acyltransferase YP_001368201.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: sbl:Sbal_4044 phospholipid/glycerol acyltransferase YP_001368202.1 PFAM: protein of unknown function DUF523; KEGG: sbl:Sbal_4045 protein of unknown function DUF523 YP_001368203.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: shw:Sputw3181_3783 transcriptional regulator, GntR family YP_001368204.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate YP_001368205.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity YP_001368206.1 Catalyzes the conversion of citrate to isocitrate YP_001368207.1 TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: sbl:Sbal_4050 putative AcnD-accessory protein PrpF YP_001368208.1 KEGG: sbl:Sbal_4051 isocitrate lyase family protein YP_001368209.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_4052 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001368210.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids YP_001368211.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: sbl:Sbal_4054 transcriptional antiterminator, Rof YP_001368212.1 PFAM: Endoribonuclease L-PSP; KEGG: sbl:Sbal_4056 endoribonuclease L-PSP YP_001368213.1 PFAM: Citrate transporter; Na+ antiporter NhaC; KEGG: sbl:Sbal_4057 Na+/H+ antiporter NhaC YP_001368214.1 PFAM: protein of unknown function DUF904; KEGG: sbl:Sbal_4058 protein of unknown function DUF904 YP_001368215.1 PFAM: protein of unknown function DUF1107; KEGG: sbl:Sbal_4059 protein of unknown function DUF1107 YP_001368216.1 PFAM: DSBA oxidoreductase; KEGG: sbl:Sbal_4060 DsbA oxidoreductase YP_001368217.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages YP_001368218.1 KEGG: sbl:Sbal_4062 hypothetical protein YP_001368219.1 PFAM: protein of unknown function UPF0061; KEGG: sbl:Sbal_4063 protein of unknown function UPF0061 YP_001368220.1 KEGG: sbl:Sbal_4064 hypothetical protein YP_001368221.1 KEGG: sbl:Sbal_4065 hypothetical protein YP_001368222.1 PFAM: DsrE family protein; KEGG: sbl:Sbal_4066 DsrE family protein YP_001368223.1 KEGG: sbl:Sbal_4067 hypothetical protein YP_001368224.1 KEGG: sbl:Sbal_4068 hypothetical protein YP_001368225.1 KEGG: sbl:Sbal_4069 hypothetical protein YP_001368226.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ajs:Ajs_4122 diguanylate cyclase YP_001368227.1 KEGG: sbl:Sbal_4077 hypothetical protein YP_001368228.1 PFAM: acyltransferase 3; KEGG: sbl:Sbal_4078 acyltransferase 3 YP_001368229.1 KEGG: sbl:Sbal_4079 hypothetical protein YP_001368230.1 PFAM: protein of unknown function DUF1232; KEGG: sbl:Sbal_4080 protein of unknown function DUF1232 YP_001368231.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sbl:Sbal_4081 helix-turn-helix-domain containing protein, AraC type YP_001368232.1 PFAM: PEBP family protein; KEGG: sbl:Sbal_4082 PEBP family protein YP_001368233.1 KEGG: shw:Sputw3181_3819 hypothetical protein YP_001368234.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: sbl:Sbal_4084 ornithine decarboxylase YP_001368235.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system YP_001368236.1 PFAM: porin Gram-negative type; KEGG: sbl:Sbal_4086 porin, gram-negative type YP_001368237.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: sbl:Sbal_4087 carbohydrate kinase, thermoresistant glucokinase family YP_001368238.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; KEGG: sbl:Sbal_4088 gluconate transporter YP_001368239.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbl:Sbal_4089 periplasmic binding protein/LacI transcriptional regulator YP_001368240.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sbl:Sbal_4090 radical SAM N-terminal domain protein YP_001368241.1 KEGG: sbl:Sbal_4091 hypothetical protein YP_001368242.1 PFAM: protein of unknown function DUF1212; KEGG: sbl:Sbal_4092 protein of unknown function DUF1212 YP_001368243.1 KEGG: sbl:Sbal_4093 hypothetical protein YP_001368244.1 PFAM: ThiJ/PfpI domain protein; KEGG: shw:Sputw3181_3828 ThiJ/PfpI domain protein YP_001368245.1 PFAM: regulatory protein TetR; KEGG: shw:Sputw3181_3829 transcriptional regulator, TetR family YP_001368246.1 KEGG: shw:Sputw3181_3830 hypothetical protein YP_001368247.1 KEGG: sbl:Sbal_4095 putative orphan protein YP_001368248.1 KEGG: sbl:Sbal_4096 hypothetical protein YP_001368249.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sbl:Sbal_4098 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001368250.1 PFAM: LppC family lipoprotein; KEGG: sbl:Sbal_4099 LppC family lipoprotein YP_001368251.1 PFAM: protein of unknown function UPF0102; KEGG: sbl:Sbal_4100 protein of unknown function UPF0102 YP_001368252.1 TIGRFAM: phosphoheptose isomerase; KEGG: sbl:Sbal_4101 phosphoheptose isomerase YP_001368253.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: sbl:Sbal_4102 transport-associated YP_001368254.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_4103 protein of unknown function DUF6, transmembrane YP_001368255.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_4104 transcriptional regulator, LysR family YP_001368256.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001368257.1 TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbl:Sbal_4106 phosphoglycolate phosphatase YP_001368258.1 PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: sbl:Sbal_4107 ribulose-phosphate 3-epimerase YP_001368259.1 KEGG: sbl:Sbal_4108 hypothetical protein YP_001368260.1 KEGG: sbl:Sbal_4109 hypothetical protein YP_001368261.1 TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; KEGG: sbl:Sbal_4110 DNA adenine methylase YP_001368262.1 PFAM: Sporulation domain protein; KEGG: sbl:Sbal_4111 sporulation domain protein YP_001368263.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_001368264.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis YP_001368265.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: sbl:Sbal_4114 type IV pilus secretin PilQ YP_001368266.1 PFAM: Pilus assembly protein PilP; KEGG: sbl:Sbal_4115 pilus assembly protein, PilQ YP_001368267.1 PFAM: Pilus assembly protein PilO; KEGG: sbl:Sbal_4116 pilus assembly protein, PilO YP_001368268.1 PFAM: Fimbrial assembly family protein; KEGG: sbl:Sbal_4117 fimbrial assembly family protein YP_001368269.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: sbl:Sbal_4118 type IV pilus assembly protein PilM YP_001368270.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sbl:Sbal_4119 penicillin-binding protein, 1A family YP_001368271.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_001368272.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_001368273.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation YP_001368274.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_001368275.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_001368276.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate YP_001368277.1 PFAM: protein of unknown function DUF1439; KEGG: sbl:Sbal_4126 protein of unknown function DUF1439 YP_001368278.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: sbl:Sbal_4127 competence/damage-inducible protein CinA YP_001368279.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: sbl:Sbal_4129 DNA binding domain, excisionase family YP_001368280.1 PFAM: formate dehydrogenase subunit FdhD; KEGG: sbl:Sbal_4130 formate dehydrogenase, subunit FdhD YP_001368281.1 KEGG: sbl:Sbal_4131 hypothetical protein YP_001368282.1 KEGG: sbl:Sbal_4132 hypothetical protein YP_001368283.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_4133 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001368284.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: sbl:Sbal_4134 cytoplasmic chaperone TorD family protein YP_001368285.1 TIGRFAM: Formate dehydrogenase region TAT target; KEGG: sbl:Sbal_4135 hypothetical protein YP_001368286.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sbl:Sbal_4136 molybdopterin oxidoreductase YP_001368287.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_4137 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001368288.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sbl:Sbal_4138 formate dehydrogenase, gamma subunit YP_001368289.1 TIGRFAM: Formate dehydrogenase region TAT target; KEGG: sbl:Sbal_4139 hypothetical protein YP_001368290.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sbl:Sbal_4140 molybdopterin oxidoreductase YP_001368291.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shw:Sputw3181_3876 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001368292.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sbl:Sbal_4142 formate dehydrogenase, gamma subunit YP_001368293.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_3728 methyl-accepting chemotaxis sensory transducer YP_001368294.1 KEGG: sbl:Sbal_0223 hypothetical protein YP_001368295.1 KEGG: sbl:Sbal_0222 hypothetical protein YP_001368296.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_0221 Sel1 domain protein repeat-containing protein YP_001368297.1 PFAM: Bile acid:sodium symporter; KEGG: sbl:Sbal_0220 bile acid:sodium symporter YP_001368298.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001368299.1 KEGG: sbl:Sbal_0218 hypothetical protein YP_001368300.1 IrgA; binds ferric enterobactin; irgA gene expression is repressed by Fur and induced by the divergently transcribed upstream gene irgB; outer membrane protein; involved in iron metabolism YP_001368301.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0216 transcriptional regulator, LysR family YP_001368302.1 PFAM: Patatin; KEGG: sbl:Sbal_0215 patatin YP_001368303.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0214 transcriptional regulator, LysR family YP_001368304.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0213 protein of unknown function DUF6, transmembrane YP_001368305.1 KEGG: sbl:Sbal_0212 hypothetical protein YP_001368306.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sbl:Sbal_0211 RNA methyltransferase, TrmH family, group 2 YP_001368307.1 KEGG: sbl:Sbal_0210 hypothetical protein YP_001368308.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: sbl:Sbal_0209 peptidase S9, prolyl oligopeptidase active site domain protein YP_001368309.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_0208 peptidase M16 domain protein YP_001368310.1 PFAM: peptidase M16 domain protein; KEGG: sbl:Sbal_0207 peptidase M16 domain protein YP_001368311.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sbl:Sbal_0206 amidohydrolase YP_001368312.1 KEGG: vch:VCA0433 hypothetical protein YP_001368314.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sbl:Sbal_0201 methyltransferase type 11 YP_001368315.1 KEGG: sbl:Sbal_0200 hypothetical protein YP_001368316.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: sbl:Sbal_0199 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001368317.1 PFAM: DTW domain containing protein; KEGG: sbl:Sbal_0198 DTW domain containing protein YP_001368318.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sbl:Sbal_0196 drug resistance transporter, Bcr/CflA subfamily YP_001368319.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0195 transcriptional regulator, LysR family YP_001368320.1 KEGG: sbl:Sbal_3426 hypothetical protein YP_001368321.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0193 methyl-accepting chemotaxis sensory transducer YP_001368322.1 KEGG: sbl:Sbal_0192 hypothetical protein YP_001368323.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_0191 Sel1 domain protein repeat-containing protein YP_001368324.1 KEGG: sbl:Sbal_0190 hypothetical protein YP_001368325.1 KEGG: sbl:Sbal_0189 hypothetical protein YP_001368326.1 PFAM: protein of unknown function DUF1332; KEGG: sbl:Sbal_0188 protein of unknown function DUF1332 YP_001368327.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: sbl:Sbal_0187 putative signal transduction protein YP_001368328.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: sbl:Sbal_0186 TonB family protein YP_001368329.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function YP_001368330.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: sbl:Sbal_0184 putative transcriptional regulator, AsnC family YP_001368331.1 PFAM: Polysulphide reductase NrfD; KEGG: sbl:Sbal_0183 polysulphide reductase, NrfD YP_001368332.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_0182 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001368333.1 KEGG: sbl:Sbal_0181 formate-dependent nitrite reductase YP_001368334.1 KEGG: sbl:Sbal_0180 hypothetical protein YP_001368335.1 PFAM: transposase IS4 family protein; KEGG: asa:ASA_P4G164 transposase YP_001368336.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis YP_001368337.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_0177 transcriptional regulator, fis family YP_001368338.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate YP_001368339.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: sbl:Sbal_0175 O-succinylbenzoate-CoA ligase YP_001368340.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_001368341.1 PFAM: protein of unknown function DUF214; KEGG: sbl:Sbal_0173 protein of unknown function DUF214 YP_001368342.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0172 cell division ATP-binding protein FtsE YP_001368343.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; KEGG: sbl:Sbal_0171 signal recognition particle-docking protein FtsY YP_001368344.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: sbl:Sbal_0170 putative methyltransferase YP_001368345.1 PFAM: protein of unknown function DUF1145; KEGG: sbl:Sbal_0169 protein of unknown function DUF1145 YP_001368346.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: sbl:Sbal_0168 NapC/NirT cytochrome c domain protein YP_001368347.1 KEGG: son:SO_A0158 hypothetical protein YP_001368348.1 KEGG: sbl:Sbal_0166 hypothetical protein YP_001368349.1 KEGG: sbl:Sbal_0165 hypothetical protein YP_001368350.1 KEGG: sbl:Sbal_0164 hypothetical protein YP_001368351.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sbl:Sbal_0163 efflux transporter, RND family, MFP subunit YP_001368352.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_0162 heavy metal efflux pump, CzcA family YP_001368353.1 PFAM: ribonuclease T2; KEGG: sbl:Sbal_0161 ribonuclease T2 YP_001368354.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbl:Sbal_0159 glyoxalase/bleomycin resistance protein/dioxygenase YP_001368355.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; KEGG: sbl:Sbal_0158 aromatic amino acid transporter YP_001368356.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA YP_001368357.1 Represses a number of genes involved in the response to DNA damage YP_001368358.1 KEGG: sbl:Sbal_0155 hypothetical protein YP_001368359.1 TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; KEGG: sbl:Sbal_0154 cytochrome c oxidase, subunit II YP_001368360.1 TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; KEGG: sbl:Sbal_0153 cytochrome-c oxidase YP_001368361.1 involved in the insertion of copper into subunit I of cytochrome C oxidase YP_001368362.1 PFAM: cytochrome c oxidase subunit III; KEGG: sbl:Sbal_0151 cytochrome c oxidase, subunit III YP_001368363.1 KEGG: slo:Shew_0121 hypothetical protein YP_001368364.1 KEGG: sbl:Sbal_0150 hypothetical protein YP_001368365.1 KEGG: sbl:Sbal_0149 hypothetical protein YP_001368366.1 PFAM: cytochrome oxidase assembly; KEGG: sbl:Sbal_0148 cytochrome oxidase assembly YP_001368367.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001368368.1 PFAM: electron transport protein SCO1/SenC; KEGG: sbl:Sbal_0146 electron transport protein SCO1/SenC YP_001368369.1 PFAM: polysaccharide deacetylase; KEGG: sbl:Sbal_0145 polysaccharide deacetylase YP_001368370.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sbl:Sbal_0144 MATE efflux family protein YP_001368371.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source YP_001368372.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO4620 fumarate reductase, flavoprotein subunit precursor YP_001368373.1 KEGG: shn:Shewana3_4005 conserved hypothetical protein YP_001368374.1 PFAM: histidine kinase A domain protein; KEGG: shw:Sputw3181_0116 ATP-binding region, ATPase domain protein domain protein YP_001368375.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: spc:Sputcn32_3798 two component transcriptional regulator, winged helix family YP_001368376.1 PFAM: regulatory protein LuxR; KEGG: shw:Sputw3181_0114 response regulator receiver protein YP_001368377.1 KEGG: sbl:Sbal_0141 competence protein ComF YP_001368378.1 TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_0140 BioH protein YP_001368379.1 KEGG: sbl:Sbal_0139 hypothetical protein YP_001368380.1 PFAM: sulfatase; KEGG: sbl:Sbal_0138 sulfatase YP_001368381.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sbl:Sbal_0137 RNA binding S1 domain protein YP_001368382.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: sbl:Sbal_0136 transcription elongation factor GreB YP_001368383.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: shn:Shewana3_4015 diguanylate cyclase YP_001368384.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: shn:Shewana3_4016 putative PAS/PAC sensor protein YP_001368385.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation YP_001368386.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR YP_001368387.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: shn:Shewana3_4019 methyl-accepting chemotaxis sensory transducer YP_001368388.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shn:Shewana3_4020 redoxin domain protein YP_001368389.1 KEGG: shm:Shewmr7_3906 hypothetical protein YP_001368390.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: shn:Shewana3_4024 propeptide, PepSY amd peptidase M4 YP_001368391.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: spc:Sputcn32_3852 two component transcriptional regulator, winged helix family YP_001368392.1 PFAM: ATP-binding region ATPase domain protein; KEGG: spc:Sputcn32_3853 integral membrane sensor signal transduction histidine kinase YP_001368393.1 KEGG: shw:Sputw3181_0099 hypothetical protein YP_001368394.1 KEGG: shn:Shewana3_4028 conserved hypothetical protein YP_001368395.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: shw:Sputw3181_0097 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s) YP_001368396.1 KEGG: shw:Sputw3181_0096 hypothetical protein YP_001368397.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: shw:Sputw3181_0095 ubiquinol oxidase, subunit II YP_001368398.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: shn:Shewana3_4032 cytochrome c oxidase, subunit I YP_001368399.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: shw:Sputw3181_0093 cytochrome c oxidase, subunit III YP_001368400.1 TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: shw:Sputw3181_0092 cytochrome c oxidase subunit IV YP_001368401.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001368402.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shw:Sputw3181_3956 redoxin domain protein YP_001368403.1 PFAM: DSBA oxidoreductase; KEGG: shw:Sputw3181_3957 DsbA oxidoreductase YP_001368404.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: shw:Sputw3181_3958 putative suppressor for copper-sensitivity B precursor YP_001368405.1 KEGG: shw:Sputw3181_3959 hypothetical protein YP_001368406.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001368407.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: spc:Sputcn32_0111 transcriptional regulator, LysR family YP_001368408.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: vco:VC0395_0977 antibiotic acetyltransferase YP_001368409.1 KEGG: hch:HCH_02014 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_001368410.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bur:Bcep18194_A5453 sigma-24 (FecI-like) YP_001368411.1 PFAM: FecR protein; KEGG: bur:Bcep18194_A5452 putative FecR YP_001368412.1 PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: shn:Shewana3_3929 TonB-dependent receptor YP_001368414.1 PFAM: PepSY-associated TM helix domain protein; KEGG: nha:Nham_3721 PepSY-associated TM helix YP_001368415.1 KEGG: nha:Nham_3722 hypothetical protein YP_001368416.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: aeh:Mlg_1848 MotA/TolQ/ExbB proton channel YP_001368417.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aeh:Mlg_1847 biopolymer transport protein ExbD/TolR YP_001368418.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: hha:Hhal_0452 biopolymer transport protein ExbD/TolR YP_001368419.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: pat:Patl_2276 TonB family protein YP_001368420.1 PFAM: protein of unknown function DUF548; KEGG: shw:Sputw3181_3966 protein of unknown function DUF548 YP_001368421.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: shw:Sputw3181_3967 diguanylate cyclase/phosphodiesterase YP_001368422.1 PFAM: protein of unknown function DUF519; KEGG: spc:Sputcn32_0098 protein of unknown function DUF519 YP_001368423.1 PFAM: Lytic transglycosylase catalytic; KEGG: shm:Shewmr7_3923 lytic transglycosylase, catalytic YP_001368424.1 KEGG: son:SO4661 hypothetical protein YP_001368425.1 PFAM: LemA family protein; KEGG: son:SO4662 lemA protein YP_001368426.1 PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; KEGG: she:Shewmr4_3833 AbgT putative transporter YP_001368427.1 KEGG: shm:Shewmr7_3927 hypothetical protein YP_001368428.1 KEGG: shn:Shewana3_4044 hypothetical protein YP_001368429.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: shw:Sputw3181_3974 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001368430.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shw:Sputw3181_3975 efflux transporter, RND family, MFP subunit YP_001368431.1 KEGG: sbl:Sbal_0128 hypothetical protein YP_001368432.1 KEGG: sbl:Sbal_0127 conserved hypothetical 3-methyladenine DNA glycosylase YP_001368433.1 PFAM: Glutathione S-transferase domain; KEGG: sbl:Sbal_0126 glutathione S-transferase, N-terminal domain YP_001368434.1 KEGG: sbl:Sbal_0125 hypothetical protein YP_001368435.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: sbl:Sbal_0124 oligopeptidase A YP_001368436.1 KEGG: sbl:Sbal_0123 hypothetical protein YP_001368437.1 KEGG: sbl:Sbal_0122 hypothetical protein YP_001368438.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense YP_001368439.1 PFAM: phage integrase family protein; KEGG: shw:Sputw3181_3985 phage integrase family protein YP_001368440.1 KEGG: sdn:Sden_3587 hypothetical protein YP_001368441.1 KEGG: shw:Sputw3181_3987 hypothetical protein YP_001368442.1 KEGG: sdn:Sden_3584 hypothetical protein YP_001368444.1 KEGG: sdn:Sden_0133 hypothetical protein YP_001368445.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: sdn:Sden_0132 YD repeat YP_001368446.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: she:Shewmr4_3210 DNA-directed DNA polymerase YP_001368447.1 PFAM: peptidase S24 S26A and S26B; KEGG: sdn:Sden_3236 peptidase S24, S26A and S26B YP_001368448.1 KEGG: ppu:PP_0023 hypothetical protein YP_001368449.1 PFAM: helix-turn-helix domain protein; KEGG: spc:Sputcn32_3837 helix-turn-helix domain protein YP_001368450.1 KEGG: spc:Sputcn32_3838 hypothetical protein YP_001368451.1 PFAM: type III restriction protein res subunit; KEGG: spc:Sputcn32_3839 type III restriction enzyme, res subunit YP_001368452.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001368453.1 KEGG: sfu:Sfum_2858 hypothetical protein YP_001368454.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: sfu:Sfum_2857 AAA ATPase, central domain protein YP_001368455.1 PFAM: transposase IS3/IS911 family protein; KEGG: sbl:Sbal_4461 transposase IS3/IS911 family protein YP_001368456.1 PFAM: UvrD/REP helicase; KEGG: dar:Daro_2560 UvrD/REP helicase YP_001368457.1 PFAM: protein of unknown function DUF1656; KEGG: sbl:Sbal_0120 protein of unknown function DUF1656 YP_001368458.1 PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_0119 secretion protein HlyD family protein YP_001368459.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: sbl:Sbal_0118 fusaric acid resistance protein conserved region YP_001368460.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+ symporter; KEGG: sbl:Sbal_0117 sodium/proline symporter YP_001368461.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001368462.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: sbl:Sbal_0115 gamma-glutamyl phosphate reductase YP_001368463.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0114 TonB-dependent siderophore receptor YP_001368464.1 KEGG: sbl:Sbal_0113 putative secreted protein YP_001368465.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_0112 efflux transporter, RND family, MFP subunit YP_001368466.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_0111 acriflavin resistance protein YP_001368467.1 KEGG: sbl:Sbal_0110 hypothetical protein YP_001368468.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sbl:Sbal_0109 PepSY-associated TM helix domain protein YP_001368469.1 KEGG: sbl:Sbal_0108 hypothetical protein YP_001368470.1 KEGG: shm:Shewmr7_3943 SH3, type 3 domain protein YP_001368471.1 PFAM: helix-turn-helix domain protein; KEGG: sbl:Sbal_0106 transcriptional regulator, XRE family YP_001368472.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle YP_001368473.1 PFAM: conserved hypothetical protein 698; KEGG: sbl:Sbal_0104 conserved hypothetical protein 698 YP_001368474.1 KEGG: sbl:Sbal_0103 hypothetical protein YP_001368475.1 SMART: regulatory protein LuxR; KEGG: sbl:Sbal_0102 response regulator receiver protein YP_001368476.1 KEGG: sbl:Sbal_0101 hypothetical protein YP_001368477.1 KEGG: sbl:Sbal_0100 hypothetical protein YP_001368478.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_0099 heavy metal efflux pump, CzcA family YP_001368479.1 KEGG: sbl:Sbal_0098 hypothetical protein YP_001368480.1 PFAM: Paraquat-inducible protein A; KEGG: sbl:Sbal_0097 paraquat-inducible protein A YP_001368481.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: sbl:Sbal_0096 metal dependent phosphohydrolase YP_001368482.1 KEGG: sbl:Sbal_0095 hypothetical protein YP_001368483.1 KEGG: she:Shewmr4_3863 hypothetical protein YP_001368484.1 KEGG: sbl:Sbal_0092 hypothetical protein YP_001368485.1 PFAM: cobalt transport protein; KEGG: sbl:Sbal_0091 cobalt transport protein YP_001368486.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0090 ABC transporter related YP_001368487.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0089 TonB-dependent receptor, plug YP_001368488.1 TIGRFAM: isochorismate synthase; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: sbl:Sbal_0088 isochorismate synthase YP_001368489.1 KEGG: sbl:Sbal_0087 hypothetical protein YP_001368490.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: sbl:Sbal_0086 hypothetical protein YP_001368491.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_0085 GCN5-related N-acetyltransferase YP_001368492.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0084 integral membrane sensor signal transduction histidine kinase YP_001368493.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sbl:Sbal_0083 two component, sigma54 specific, transcriptional regulator, fis family YP_001368494.1 KEGG: sbl:Sbal_0082 extracellular solute-binding protein, family 1 YP_001368495.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbl:Sbal_0081 binding-protein-dependent transport systems inner membrane component YP_001368496.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbl:Sbal_0080 ABC transporter related YP_001368497.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: sbl:Sbal_0079 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001368498.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin binding domain; molybdopterin-guanine dinucleotide biosynthesis MobB region; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sbl:Sbal_0078 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001368499.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_001368500.1 KEGG: sbl:Sbal_0076 hypothetical protein YP_001368501.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001368502.1 PFAM: glycosyl transferase family 39; KEGG: shw:Sputw3181_0066 glycosyl transferase, family 39 YP_001368503.1 PFAM: SNARE associated Golgi protein; KEGG: shw:Sputw3181_0065 hypothetical protein YP_001368504.1 PFAM: glycosyl transferase family 2; KEGG: shw:Sputw3181_0064 glycosyl transferase, family 2 YP_001368505.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: shw:Sputw3181_0063 UDP-glucose/GDP-mannose dehydrogenase YP_001368506.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: shw:Sputw3181_0062 NAD-dependent epimerase/dehydratase YP_001368507.1 KEGG: sbl:Sbal_0069 hypothetical protein YP_001368508.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001368509.1 PFAM: glycosyl transferase group 1; KEGG: son:SO4682 glycosyl transferase, group 1 family protein YP_001368510.1 PFAM: glycosyl transferase group 1; KEGG: shm:Shewmr7_3985 glycosyl transferase, group 1 YP_001368511.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: son:SO4680 hypothetical protein YP_001368512.1 PFAM: glycosyl transferase group 1; KEGG: shw:Sputw3181_0055 glycosyl transferase, group 1 YP_001368513.1 PFAM: glycosyl transferase family 9; KEGG: sbl:Sbal_0062 glycosyl transferase, family 9 YP_001368514.1 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position YP_001368515.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: sbl:Sbal_0060 three-deoxy-D-manno-octulosonic-acid transferase domain protein YP_001368516.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_0059 transcriptional regulator, TetR family YP_001368517.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_001368518.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_001368519.1 PFAM: Rhodanese domain protein; KEGG: shw:Sputw3181_0048 rhodanese domain protein YP_001368520.1 PFAM: Rhomboid family protein; KEGG: sbl:Sbal_0055 rhomboid family protein YP_001368521.1 PFAM: ThiJ/PfpI domain protein; KEGG: sbl:Sbal_0054 ThiJ/PfpI domain protein YP_001368522.1 KEGG: sbl:Sbal_0053 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_001368523.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001368524.1 PFAM: cytochrome c class I; KEGG: sbl:Sbal_0051 cytochrome c, class I YP_001368525.1 KEGG: sbl:Sbal_0050 hypothetical protein YP_001368526.1 PFAM: protein of unknown function DUF414; KEGG: sbl:Sbal_0049 protein of unknown function DUF414 YP_001368527.1 KEGG: sbl:Sbal_0048 hypothetical protein YP_001368528.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001368529.1 catalyzes the formation of inosine from adenosine YP_001368530.1 PFAM: protein of unknown function DUF885; KEGG: sbl:Sbal_0045 protein of unknown function DUF885 YP_001368531.1 PFAM: alpha/beta hydrolase fold; KEGG: sbl:Sbal_0044 alpha/beta hydrolase fold YP_001368532.1 TIGRFAM: PAS sensor protein; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; KEGG: sbl:Sbal_0043 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_001368533.1 TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_4338 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001368534.1 KEGG: sbl:Sbal_4339 hypothetical protein YP_001368535.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA YP_001368536.1 KEGG: sbl:Sbal_4341 hypothetical protein YP_001368537.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_001368538.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: shw:Sputw3181_4049 transcriptional regulator, DeoR family YP_001368539.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_4363 TonB-dependent siderophore receptor YP_001368540.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: sbl:Sbal_4364 UDP-N-acetylglucosamine pyrophosphorylase YP_001368541.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_001368542.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001368543.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_001368544.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001368545.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex YP_001368546.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel. YP_001368547.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0 YP_001368548.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001368549.1 PFAM: ATP synthase I chain; KEGG: sbl:Sbal_4373 ATP synthase I chain YP_001368550.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: sbl:Sbal_4374 ParB-like partition protein YP_001368551.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: sbl:Sbal_4375 cobyrinic acid a,c-diamide synthase YP_001368552.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA YP_001368553.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001368554.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group YP_001368555.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_001368556.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: sbl:Sbal_4380 60 kDa inner membrane insertion protein YP_001368557.1 PFAM: protein of unknown function DUF37; KEGG: sbl:Sbal_4381 protein of unknown function DUF37 YP_001368558.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates YP_001368559.1 in Escherichia coli transcription of this gene is enhanced by polyamines