-- dump date   	20240420_054309
-- class       	Genbank::Contig
-- table       	contig_comment
-- id	comment
NC_008345.1	REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP000447.1.REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. FredricksonREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-StanfordREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50 Pseudo Genes (frameshifted)       :: 15 of 50REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50 Pseudo Genes (frameshifted)       :: 15 of 50 Pseudo Genes (incomplete)         :: 35 of 50REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50 Pseudo Genes (frameshifted)       :: 15 of 50 Pseudo Genes (incomplete)         :: 35 of 50 Pseudo Genes (internal stop)      :: 10 of 50REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50 Pseudo Genes (frameshifted)       :: 15 of 50 Pseudo Genes (incomplete)         :: 35 of 50 Pseudo Genes (internal stop)      :: 10 of 50 Pseudo Genes (multiple problems)  :: 8 of 50REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50 Pseudo Genes (frameshifted)       :: 15 of 50 Pseudo Genes (incomplete)         :: 35 of 50 Pseudo Genes (internal stop)      :: 10 of 50 Pseudo Genes (multiple problems)  :: 8 of 50 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP000447.1. URL -- http://www.jgi.doe.gov JGI Project ID: 3634606 Source DNA and bacteria available from James K. Fredrickson (Jim.fredrickson@pnl.gov) Bacteria also available from NCIMB:NCIMB 400 Contacts: James K. Fredrickson (Jim.fredrickson@pnl.gov)           Paul Richardson (microbes@cuba.jgi-psf.org) Quality assurance done by JGI-Stanford Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. It is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider               :: NCBI RefSeq Annotation Date                   :: 04/23/2023 01:28:10 Annotation Pipeline               :: NCBI Prokaryotic Genome                                      Annotation Pipeline (PGAP) Annotation Method                 :: Best-placed reference protein                                      set; GeneMarkS-2+ Annotation Software revision      :: 6.5 Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total)                     :: 4,180 CDSs (total)                      :: 4,050 Genes (coding)                    :: 4,001 CDSs (with protein)               :: 4,001 Genes (RNA)                       :: 130 rRNAs                             :: 10, 9, 9 (5S, 16S, 23S) complete rRNAs                    :: 10, 9, 9 (5S, 16S, 23S) tRNAs                             :: 98 ncRNAs                            :: 4 Pseudo Genes (total)              :: 50 CDSs (without protein)            :: 49 Pseudo Genes (ambiguous residues) :: 0 of 50 Pseudo Genes (frameshifted)       :: 15 of 50 Pseudo Genes (incomplete)         :: 35 of 50 Pseudo Genes (internal stop)      :: 10 of 50 Pseudo Genes (multiple problems)  :: 8 of 50 ##Genome-Annotation-Data-END## COMPLETENESS: full length.