-- dump date   	20140620_064141
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
1172616	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; transposase family protein, truncation; similar to GB:Z26883, GB:S72494, PID:472942, and SP:Q48258; identified by sequence similarity; putative
1172617	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod1, transposase OrfB, truncation; similar to GP:6759969; identified by sequence similarity; putative
4555721	truncated by ISSod4_46; GNAT family acetyltransferase, truncation; comparison of this gene to its homologs suggests this gene has been truncated
1172475	truncation by ISSod1_43 results in loss of approximately 1693 N-terminal residues of translated protein; conjugative transfer protein, TraI, truncation
1172478	truncated by ISSod1_43
1172487	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod4, transposase, truncation; similar to GP:5834763; identified by sequence similarity; putative
4555725	interruption by ISSod1_44 results in duplication of 3 bp; conserved in Shewanella sp.; hypothetical protein, interruption; this region contains one or more premature stops and/or frameshifts which are not the result of sequencing error
1172496	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; transposase, IS5 family, truncation; similar to GB:V00533, GB:J00215, GB:J00214, SP:P01563, SP:P01570, PID:306907, PID:32636, PID:32721, PID:386798, PID:490152, PID:553350, PID:553514, PID:758076,  and PID:825603; identified by sequence similarity; putative
1172498	truncated by ISSod6_7
1172504	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod1, transposase OrfB, truncation; similar to GP:11139521; identified by sequence similarity; putative
1172507	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; transposase, IS6 family, truncation; similar to GP:7682641; identified by sequence similarity; putative
1172505	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; ISSod8, transposase, degenerate
1172512	This region contains an authentic frame shift and is not the result of a sequencing artifact; transposase, IS3 family, interruption; similar to GB:Z26883, GB:S72494, PID:472942, SP:Q48258, GB:Z26883, GB:S72494, PID:472942, and SP:Q48258; identified by sequence similarity; putative
1172515	This region contains an authentic frame shift and is not the result of a sequencing artifact; transposase, IS3 family, interruption; similar to GB:Z26883, GB:S72494, PID:472942, SP:Q48258, GB:Z26883, GB:S72494, PID:472942, and SP:Q48258; identified by sequence similarity; putative
1172516	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod3, transposase, truncation; similar to GP:5706382; identified by sequence similarity; putative
1172526	This region contains an authentic frame shift and is not the result of a sequencing artifact; ISSod4, transposase, interruption
1172524	This region contains an authentic frame shift and is not the result of a sequencing artifact; ISSod4, transposase, interruption; similar to GP:5834763; identified by sequence similarity; putative
1172530	truncation by ISSod4
1172534	This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GP:4580969, GP|14022903,  and GP:4580969; identified by sequence similarity; putative
1172536	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; site-specific recombinase, resolvase family, truncation; similar to GP:5668998; identified by sequence similarity; putative
1172539	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod6, transposase, truncation; similar to GP:4512224; identified by sequence similarity; putative
4555727	truncation by ISSod13_3 results in loss of approximately 60 N-terminal aa residues; GNAT family acetyltransferase, truncation; comparison of this gene to its homologs suggests this gene has been truncated
1172547	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; transposase, degenerate
1172548	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod12, transposase, truncation; similar to GB:V00533, GB:J00215, GB:J00214, SP:P01563, SP:P01570, PID:306907, PID:32636, PID:32721, PID:386798, PID:490152, PID:553350, PID:553514, PID:758076,  and PID:825603; identified by sequence similarity; putative
1172549	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; transposase, IS110 family, degenerate; similar to PIR:A42937, GB:X66899, GB:X72990, GB:X72991, GB:X72992, GB:X72993, GB:X72994, GB:X72995, GB:X72996, GB:X72997, GB:X72998, GB:X72999, GB:X73000, GB:X73001, GB:X73002, GB:X73003, GB:X73004, SP:Q01844, PID:1572086, PID:1666068, PID:31280,  and PID:825654; identified by sequence similarity; putative
1172551	This region contains an authentic frame shift and is not the result of a sequencing artifact; conserved hypothetical protein, authentic frameshift; similar to GP|12484143; identified by sequence similarity; putative
1172556	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; transposase, IS3 family, degenerate; similar to SP:P05822, GB:J05068, SP:P20061,  and PID:307479; identified by sequence similarity; putative
1172557	This region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; ISSod8, transposase, degenerate
1172558	interruption by ISSod3_19 results in duplication of 6 bp of gene; periplasmic sel1-like repeat protein, interruption
1172560	AMP-binding family protein, truncation
1172561	secreted morn repeat protein; frameshift
1172569	IS3 family transposase with predicted -1 frameshift decoding taking place on AAAAAAG; interrupted by ISSod4_51 resulting in 8 bp gene duplication; ISSod1 transposase, TnpA_ISSod1_47
1172566	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; ISSod1, transposase OrfB, truncation; similar to GP:3293239; identified by sequence similarity; putative
1172586	similar to glutathione-dependent formaldehyde-activating enzyme; this region contains a gene with one or more premature stops or frameshifts, and is not the result of a sequencing artifact; conserved hypothetical protein, degenerate; similar to EGAD|35583, GB:X00264, SP:P01229, SP:P01233,  and PID:2292893; identified by sequence similarity; putative
1172589	This region contains a match to at least one other gene that is not full length,and is not the result of a sequencing artifact; transposase, mutator family, truncation; similar to GP:10567527; identified by sequence similarity; putative