-- dump date 20140620_064230 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001499865.1 157959831 5664840 223..1608 1 NC_009901.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1608 dnaA 5664840 dnaA Shewanella pealeana ATCC 700345 chromosomal replication initiation protein YP_001499865.1 223 D 398579 CDS YP_001499866.1 157959832 5660403 1628..2728 1 NC_009901.1 KEGG: slo:Shew_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 2728 5660403 Spea_0002 Shewanella pealeana ATCC 700345 DNA polymerase III subunit beta YP_001499866.1 1628 D 398579 CDS YP_001499867.1 157959833 5660404 2849..3931 1 NC_009901.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3931 recF 5660404 recF Shewanella pealeana ATCC 700345 recombination protein F YP_001499867.1 2849 D 398579 CDS YP_001499868.1 157959834 5660405 3924..6365 1 NC_009901.1 KEGG: shw:Sputw3181_0004 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 6365 5660405 Spea_0004 Shewanella pealeana ATCC 700345 DNA gyrase subunit B YP_001499868.1 3924 D 398579 CDS YP_001499869.1 157959835 5660406 6442..7506 1 NC_009901.1 PFAM: Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KEGG: shn:Shewana3_0015 putative signal transduction protein; metal dependent phosphohydrolase 7506 5660406 Spea_0005 Shewanella pealeana ATCC 700345 metal dependent phosphohydrolase YP_001499869.1 6442 D 398579 CDS YP_001499870.1 157959836 5660407 complement(7582..9651) 1 NC_009901.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 9651 glyS 5660407 glyS Shewanella pealeana ATCC 700345 glycyl-tRNA synthetase subunit beta YP_001499870.1 7582 R 398579 CDS YP_001499871.1 157959837 5660408 complement(9663..10526) 1 NC_009901.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 10526 glyQ 5660408 glyQ Shewanella pealeana ATCC 700345 glycyl-tRNA synthetase subunit alpha YP_001499871.1 9663 R 398579 CDS YP_001499872.1 157959838 5660409 10686..11246 1 NC_009901.1 KEGG: slo:Shew_0011 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 11246 5660409 Spea_0008 Shewanella pealeana ATCC 700345 DNA-3-methyladenine glycosylase I YP_001499872.1 10686 D 398579 CDS YP_001499873.1 157959839 5660410 complement(11265..11930) 1 NC_009901.1 KEGG: slo:Shew_0012 hypothetical protein; hypothetical protein 11930 5660410 Spea_0009 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499873.1 11265 R 398579 CDS YP_001499874.1 157959840 5660411 complement(12160..15360) 1 NC_009901.1 PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller; KEGG: slo:Shew_0013 amidohydrolase; amidohydrolase 15360 5660411 Spea_0010 Shewanella pealeana ATCC 700345 amidohydrolase YP_001499874.1 12160 R 398579 CDS YP_001499875.1 157959841 5660412 complement(15705..16142) 1 NC_009901.1 KEGG: she:Shewmr4_0012 hypothetical protein; hypothetical protein 16142 5660412 Spea_0011 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499875.1 15705 R 398579 CDS YP_001499876.1 157959842 5660413 complement(16177..16422) 1 NC_009901.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 16422 5660413 Spea_0012 Shewanella pealeana ATCC 700345 sulfur transfer protein SirA YP_001499876.1 16177 R 398579 CDS YP_001499877.1 157959843 5660414 complement(16567..17037) 1 NC_009901.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: vfi:VF1792 regulatory protein; ybaK/ebsC protein 17037 5660414 Spea_0013 Shewanella pealeana ATCC 700345 ybaK/ebsC protein YP_001499877.1 16567 R 398579 CDS YP_001499878.1 157959844 5660415 complement(17096..17557) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB1061 hypothetical protein; N-acetyltransferase GCN5 17557 5660415 Spea_0014 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001499878.1 17096 R 398579 CDS YP_001499879.1 157959845 5660416 complement(17680..18432) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 18432 5660416 Spea_0015 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001499879.1 17680 R 398579 CDS YP_001499880.1 157959846 5660417 complement(18516..18914) 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 18914 5660417 Spea_0016 Shewanella pealeana ATCC 700345 transposase YP_001499880.1 18516 R 398579 CDS YP_001499881.1 157959847 5660418 complement(19009..20172) 1 NC_009901.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 20172 fadA 5660418 fadA Shewanella pealeana ATCC 700345 3-ketoacyl-CoA thiolase YP_001499881.1 19009 R 398579 CDS YP_001499882.1 157959848 5660419 complement(20191..22344) 1 NC_009901.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 22344 fadB 5660419 fadB Shewanella pealeana ATCC 700345 multifunctional fatty acid oxidation complex subunit alpha YP_001499882.1 20191 R 398579 CDS YP_001499883.1 157959849 5660420 22709..24031 1 NC_009901.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 24031 5660420 Spea_0019 Shewanella pealeana ATCC 700345 proline dipeptidase YP_001499883.1 22709 D 398579 CDS YP_001499884.1 157959850 5660421 24050..24664 1 NC_009901.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: slo:Shew_0021 protein of unknown function UPF0029; hypothetical protein 24664 5660421 Spea_0020 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499884.1 24050 D 398579 CDS YP_001499885.1 157959851 5660422 24810..26267 1 NC_009901.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: slo:Shew_0022 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 26267 5660422 Spea_0021 Shewanella pealeana ATCC 700345 TrkH family potassium uptake protein YP_001499885.1 24810 D 398579 CDS YP_001499886.1 157959852 5660423 26409..26936 1 NC_009901.1 KEGG: slo:Shew_0023 protoporphyrinogen oxidase; protoporphyrinogen oxidase 26936 5660423 Spea_0022 Shewanella pealeana ATCC 700345 protoporphyrinogen oxidase YP_001499886.1 26409 D 398579 CDS YP_001499887.1 157959853 5660424 27037..27435 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 27435 5660424 Spea_0023 Shewanella pealeana ATCC 700345 transposase YP_001499887.1 27037 D 398579 CDS YP_001499888.1 157959854 5660425 27519..28271 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 28271 5660425 Spea_0024 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001499888.1 27519 D 398579 CDS YP_001499889.1 157959855 5660426 complement(28334..28639) 1 NC_009901.1 PFAM: regulatory protein ArsR; KEGG: shw:Sputw3181_0018 regulatory protein, ArsR; ArsR family transcriptional regulator 28639 5660426 Spea_0025 Shewanella pealeana ATCC 700345 ArsR family transcriptional regulator YP_001499889.1 28334 R 398579 CDS YP_001499890.1 157959856 5660427 28851..29390 1 NC_009901.1 KEGG: slo:Shew_0025 protoporphyrinogen oxidase; protoporphyrinogen oxidase 29390 5660427 Spea_0026 Shewanella pealeana ATCC 700345 protoporphyrinogen oxidase YP_001499890.1 28851 D 398579 CDS YP_001499891.1 157959857 5660428 complement(29446..30888) 1 NC_009901.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: slo:Shew_3740 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 30888 5660428 Spea_0027 Shewanella pealeana ATCC 700345 TrkH family potassium uptake protein YP_001499891.1 29446 R 398579 CDS YP_001499892.1 157959858 5660429 complement(30910..32319) 1 NC_009901.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 32319 trkA 5660429 trkA Shewanella pealeana ATCC 700345 potassium transporter peripheral membrane protein YP_001499892.1 30910 R 398579 CDS YP_001499893.1 157959859 5660430 complement(32327..33607) 1 NC_009901.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sbl:Sbal_0030 sun protein; sun protein 33607 5660430 Spea_0029 Shewanella pealeana ATCC 700345 sun protein YP_001499893.1 32327 R 398579 CDS YP_001499894.1 157959860 5660431 complement(33614..34579) 1 NC_009901.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: shm:Shewmr7_0026 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 34579 5660431 Spea_0030 Shewanella pealeana ATCC 700345 methionyl-tRNA formyltransferase YP_001499894.1 33614 R 398579 CDS YP_001499895.1 157959861 5660432 complement(34584..35183) 1 NC_009901.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 35183 def 5660432 def Shewanella pealeana ATCC 700345 peptide deformylase YP_001499895.1 34584 R 398579 CDS YP_001499896.1 157959862 5660433 35245..36333 1 NC_009901.1 PFAM: Peptidoglycan-binding LysM; KEGG: slo:Shew_3735 peptidoglycan-binding LysM; peptidoglycan-binding LysM 36333 5660433 Spea_0032 Shewanella pealeana ATCC 700345 peptidoglycan-binding LysM YP_001499896.1 35245 D 398579 CDS YP_001499897.1 157959863 5660434 36489..37508 1 NC_009901.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: shw:Sputw3181_0026 DNA protecting protein DprA; DNA protecting protein DprA 37508 5660434 Spea_0033 Shewanella pealeana ATCC 700345 DNA protecting protein DprA YP_001499897.1 36489 D 398579 CDS YP_001499898.1 157959864 5660435 37511..37984 1 NC_009901.1 PFAM: protein of unknown function DUF494; KEGG: shw:Sputw3181_0027 protein of unknown function DUF494; hypothetical protein 37984 5660435 Spea_0034 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499898.1 37511 D 398579 CDS YP_001499899.1 157959865 5660436 complement(38252..39811) 1 NC_009901.1 PFAM: Peptidase M9A collagenase domain protein; KEGG: slo:Shew_3732 microbial collagenase; collagenase 39811 5660436 Spea_0035 Shewanella pealeana ATCC 700345 collagenase YP_001499899.1 38252 R 398579 CDS YP_001499900.1 157959866 5660437 40012..40575 1 NC_009901.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: sbm:Shew185_0031 DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase type IA Zn finger domain-containing protein 40575 5660437 Spea_0036 Shewanella pealeana ATCC 700345 DNA topoisomerase type IA Zn finger domain-containing protein YP_001499900.1 40012 D 398579 CDS YP_001499901.1 157959867 5660438 40662..41225 1 NC_009901.1 PFAM: SUA5/yciO/yrdC domain; KEGG: sbm:Shew185_0032 SUA5/YciO/YrdC/YwlC family protein; SUA5/yciO/yrdC domain-containing protein 41225 5660438 Spea_0037 Shewanella pealeana ATCC 700345 SUA5/yciO/yrdC domain-containing protein YP_001499901.1 40662 D 398579 CDS YP_001499902.1 157959868 5660439 41250..42164 1 NC_009901.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 42164 5660439 Spea_0038 Shewanella pealeana ATCC 700345 coproporphyrinogen III oxidase YP_001499902.1 41250 D 398579 CDS YP_001499903.1 157959869 5660440 complement(42219..42653) 1 NC_009901.1 PFAM: globin; KEGG: shm:Shewmr7_0034 globin; globin 42653 5660440 Spea_0039 Shewanella pealeana ATCC 700345 globin YP_001499903.1 42219 R 398579 CDS YP_001499904.1 157959870 5660441 42821..43636 1 NC_009901.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: slo:Shew_3727 shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 43636 5660441 Spea_0040 Shewanella pealeana ATCC 700345 shikimate 5-dehydrogenase YP_001499904.1 42821 D 398579 CDS YP_001499905.1 157959871 5660442 43660..43938 1 NC_009901.1 PFAM: protein of unknown function DUF1488; KEGG: shn:Shewana3_0044 protein of unknown function DUF1488; hypothetical protein 43938 5660442 Spea_0041 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499905.1 43660 D 398579 CDS YP_001499906.1 157959872 5660443 complement(43968..44525) 1 NC_009901.1 KEGG: son:SO_0042 carbonic anhydrase, family 3; carbonic anhydrase 44525 5660443 Spea_0042 Shewanella pealeana ATCC 700345 carbonic anhydrase YP_001499906.1 43968 R 398579 CDS YP_001499907.1 157959873 5664650 complement(57162..59639) 1 NC_009901.1 KEGG: sbl:Sbal_2968 protein of unknown function DUF115; hypothetical protein 59639 5664650 Spea_0043 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499907.1 57162 R 398579 CDS YP_001499908.1 157959874 5660445 complement(59713..59967) 1 NC_009901.1 KEGG: shn:Shewana3_1310 hypothetical protein; hypothetical protein 59967 5660445 Spea_0044 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499908.1 59713 R 398579 CDS YP_001499909.1 157959875 5660446 complement(59964..61265) 1 NC_009901.1 PFAM: protein of unknown function DUF115; KEGG: sbl:Sbal_2956 protein of unknown function DUF115; hypothetical protein 61265 5660446 Spea_0045 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499909.1 59964 R 398579 CDS YP_001499910.1 157959876 5660447 61701..62882 1 NC_009901.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: vfi:VF0140 UDP-N-acetylglucosamine 4,6-dehydratase; polysaccharide biosynthesis protein CapD 62882 5660447 Spea_0046 Shewanella pealeana ATCC 700345 polysaccharide biosynthesis protein CapD YP_001499910.1 61701 D 398579 CDS YP_001499911.1 157959877 5660448 62895..64055 1 NC_009901.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: vha:VIBHAR_00668 hypothetical protein; DegT/DnrJ/EryC1/StrS aminotransferase 64055 5660448 Spea_0047 Shewanella pealeana ATCC 700345 DegT/DnrJ/EryC1/StrS aminotransferase YP_001499911.1 62895 D 398579 CDS YP_001499912.1 157959878 5660449 64064..65242 1 NC_009901.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: vpa:VP0199 putative NeuC; UDP-N-acetylglucosamine 2-epimerase 65242 5660449 Spea_0048 Shewanella pealeana ATCC 700345 UDP-N-acetylglucosamine 2-epimerase YP_001499912.1 64064 D 398579 CDS YP_001499913.1 157959879 5660450 65250..66323 1 NC_009901.1 PFAM: N-acetylneuraminic acid synthase domain; KEGG: vfi:VF0143 N-acetylneuraminate synthase; N-acylneuraminate-9-phosphate synthase 66323 5660450 Spea_0049 Shewanella pealeana ATCC 700345 N-acylneuraminate-9-phosphate synthase YP_001499913.1 65250 D 398579 CDS YP_001499914.1 157959880 5660451 66316..66960 1 NC_009901.1 KEGG: vfi:VF0144 sialic acid biosynthesis protein NeuD; sialic acid synthase 66960 5660451 Spea_0050 Shewanella pealeana ATCC 700345 sialic acid synthase YP_001499914.1 66316 D 398579 CDS YP_001499915.1 157959881 5660452 66980..68035 1 NC_009901.1 PFAM: CBS domain containing protein; Nucleotidyl transferase; KEGG: vfi:VF0145 mannose-1-phosphate guanyltransferase; nucleotidyl transferase 68035 5660452 Spea_0051 Shewanella pealeana ATCC 700345 nucleotidyl transferase YP_001499915.1 66980 D 398579 CDS YP_001499916.1 157959882 5660453 68035..68727 1 NC_009901.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; acylneuraminate cytidylyltransferase; KEGG: vha:VIBHAR_00677 hypothetical protein; acylneuraminate cytidylyltransferase 68727 5660453 Spea_0052 Shewanella pealeana ATCC 700345 acylneuraminate cytidylyltransferase YP_001499916.1 68035 D 398579 CDS YP_001499917.1 157959883 5660454 complement(68776..69063) 1 NC_009901.1 KEGG: sdn:Sden_3629 hypothetical protein; hypothetical protein 69063 5660454 Spea_0053 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499917.1 68776 R 398579 CDS YP_001499918.1 157959884 5660455 complement(69114..69545) 1 NC_009901.1 KEGG: shw:Sputw3181_0493 type IV pilus assembly PilZ; hypothetical protein 69545 5660455 Spea_0054 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499918.1 69114 R 398579 CDS YP_001499919.1 157959885 5660456 complement(69530..70540) 1 NC_009901.1 PFAM: OmpA/MotB domain protein; KEGG: sdn:Sden_3631 OmpA/MotB; OmpA/MotB domain-containing protein 70540 5660456 Spea_0055 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001499919.1 69530 R 398579 CDS YP_001499920.1 157959886 5660457 complement(70540..71397) 1 NC_009901.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sdn:Sden_3632 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 71397 5660457 Spea_0056 Shewanella pealeana ATCC 700345 MotA/TolQ/ExbB proton channel YP_001499920.1 70540 R 398579 CDS YP_001499921.1 157959887 5660458 complement(71412..72134) 1 NC_009901.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 72134 fliA 5660458 fliA Shewanella pealeana ATCC 700345 flagellar biosynthesis sigma factor YP_001499921.1 71412 R 398579 CDS YP_001499922.1 157959888 5660459 complement(72146..72601) 1 NC_009901.1 PFAM: flagellar basal body-associated protein FliL; KEGG: sdn:Sden_3634 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 72601 5660459 Spea_0058 Shewanella pealeana ATCC 700345 flagellar basal body-associated protein FliL YP_001499922.1 72146 R 398579 CDS YP_001499923.1 157959889 5660460 complement(72616..73788) 1 NC_009901.1 PFAM: flagellar hook-length control protein; KEGG: sdn:Sden_3635 flagellar hook-length control protein; flagellar hook-length control protein 73788 5660460 Spea_0059 Shewanella pealeana ATCC 700345 flagellar hook-length control protein YP_001499923.1 72616 R 398579 CDS YP_001499924.1 157959890 5660461 complement(73781..74104) 1 NC_009901.1 KEGG: sbl:Sbal_3953 hypothetical protein; hypothetical protein 74104 5660461 Spea_0060 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499924.1 73781 R 398579 CDS YP_001499925.1 157959891 5660462 complement(74073..74453) 1 NC_009901.1 PFAM: flagellar protein FliS; KEGG: sbl:Sbal_3954 flagellar protein FliS; flagellar protein FliS 74453 5660462 Spea_0061 Shewanella pealeana ATCC 700345 flagellar protein FliS YP_001499925.1 74073 R 398579 CDS YP_001499926.1 157959892 5660463 complement(74467..75885) 1 NC_009901.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: sbl:Sbal_3955 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein 75885 5660463 Spea_0062 Shewanella pealeana ATCC 700345 flagellar hook-associated 2 domain-containing protein YP_001499926.1 74467 R 398579 CDS YP_001499927.1 157959893 5660464 complement(76202..77020) 1 NC_009901.1 PFAM: flagellin domain protein; KEGG: sbl:Sbal_3957 flagellin domain protein; flagellin domain-containing protein 77020 5660464 Spea_0063 Shewanella pealeana ATCC 700345 flagellin domain-containing protein YP_001499927.1 76202 R 398579 CDS YP_001499928.1 157959894 5660465 complement(77319..78350) 1 NC_009901.1 KEGG: spc:Sputcn32_3457 hypothetical protein; hypothetical protein 78350 5660465 Spea_0064 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499928.1 77319 R 398579 CDS YP_001499929.1 157959895 5660466 complement(78369..79286) 1 NC_009901.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: spc:Sputcn32_3458 flagellar hook-associated protein 3; flagellar hook-associated protein 3 79286 5660466 Spea_0065 Shewanella pealeana ATCC 700345 flagellar hook-associated protein 3 YP_001499929.1 78369 R 398579 CDS YP_001499930.1 157959896 5660467 complement(79297..80670) 1 NC_009901.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sbl:Sbal_3962 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 80670 5660467 Spea_0066 Shewanella pealeana ATCC 700345 flagellar hook-associated protein FlgK YP_001499930.1 79297 R 398579 CDS YP_001499931.1 157959897 5660468 complement(80721..81143) 1 NC_009901.1 FlgJ; flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain; peptidoglycan hydrolase 81143 flgJ 5660468 flgJ Shewanella pealeana ATCC 700345 peptidoglycan hydrolase YP_001499931.1 80721 R 398579 CDS YP_001499932.1 157959898 5660469 complement(81143..82273) 1 NC_009901.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 82273 flgI 5660469 flgI Shewanella pealeana ATCC 700345 flagellar basal body P-ring protein YP_001499932.1 81143 R 398579 CDS YP_001499933.1 157959899 5660470 complement(82311..82985) 1 NC_009901.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 82985 flgH 5660470 flgH Shewanella pealeana ATCC 700345 flagellar basal body L-ring protein YP_001499933.1 82311 R 398579 CDS YP_001499934.1 157959900 5660471 complement(83033..83818) 1 NC_009901.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: shw:Sputw3181_0476 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG 83818 5660471 Spea_0070 Shewanella pealeana ATCC 700345 flagellar basal-body rod protein FlgG YP_001499934.1 83033 R 398579 CDS YP_001499935.1 157959901 5660472 complement(83843..84568) 1 NC_009901.1 TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: shw:Sputw3181_0475 flagellar basal-body rod protein FlgF; flagellar basal-body rod protein FlgF 84568 5660472 Spea_0071 Shewanella pealeana ATCC 700345 flagellar basal-body rod protein FlgF YP_001499935.1 83843 R 398579 CDS YP_001499936.1 157959902 5660473 complement(84587..85795) 1 NC_009901.1 the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar hook protein FlgE 85795 flgE 5660473 flgE Shewanella pealeana ATCC 700345 flagellar hook protein FlgE YP_001499936.1 84587 R 398579 CDS YP_001499937.1 157959903 5660474 complement(85819..86478) 1 NC_009901.1 PFAM: flagellar hook capping protein; KEGG: sbl:Sbal_3969 flagellar hook capping protein; flagellar hook capping protein 86478 5660474 Spea_0073 Shewanella pealeana ATCC 700345 flagellar hook capping protein YP_001499937.1 85819 R 398579 CDS YP_001499938.1 157959904 5660475 complement(86478..86897) 1 NC_009901.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: shw:Sputw3181_0472 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 86897 5660475 Spea_0074 Shewanella pealeana ATCC 700345 flagellar basal-body rod protein FlgC YP_001499938.1 86478 R 398579 CDS YP_001499939.1 157959905 5660476 complement(86906..87256) 1 NC_009901.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar basal body rod protein FlgB 87256 flgB 5660476 flgB Shewanella pealeana ATCC 700345 flagellar basal body rod protein FlgB YP_001499939.1 86906 R 398579 CDS YP_001499940.1 157959906 5660477 87320..88084 1 NC_009901.1 PFAM: SAF domain protein; KEGG: shw:Sputw3181_0470 SAF domain; SAF domain-containing protein 88084 5660477 Spea_0076 Shewanella pealeana ATCC 700345 SAF domain-containing protein YP_001499940.1 87320 D 398579 CDS YP_001499941.1 157959907 5660478 88187..88471 1 NC_009901.1 KEGG: shw:Sputw3181_0469 hypothetical protein; hypothetical protein 88471 5660478 Spea_0077 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499941.1 88187 D 398579 CDS YP_001499942.1 157959908 5660479 88464..88922 1 NC_009901.1 KEGG: shw:Sputw3181_0468 hypothetical protein; hypothetical protein 88922 5660479 Spea_0078 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499942.1 88464 D 398579 CDS YP_001499943.1 157959909 5660480 complement(88938..89351) 1 NC_009901.1 KEGG: shw:Sputw3181_0467 hypothetical protein; hypothetical protein 89351 5660480 Spea_0079 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499943.1 88938 R 398579 CDS YP_001499944.1 157959910 5660481 complement(89366..90703) 1 NC_009901.1 KEGG: sbl:Sbal_3976 ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: AAA ATPase; FliI/YscN family ATPase 90703 5660481 Spea_0080 Shewanella pealeana ATCC 700345 FliI/YscN family ATPase YP_001499944.1 89366 R 398579 CDS YP_001499945.1 157959911 5660482 complement(90681..91436) 1 NC_009901.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 91436 fliH 5660482 fliH Shewanella pealeana ATCC 700345 flagellar assembly protein H YP_001499945.1 90681 R 398579 CDS YP_001499946.1 157959912 5660483 complement(91436..92449) 1 NC_009901.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 92449 fliG 5660483 fliG Shewanella pealeana ATCC 700345 flagellar motor switch protein G YP_001499946.1 91436 R 398579 CDS YP_001499947.1 157959913 5660484 complement(92510..94210) 1 NC_009901.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein 94210 fliF 5660484 fliF Shewanella pealeana ATCC 700345 flagellar MS-ring protein YP_001499947.1 92510 R 398579 CDS YP_001499948.1 157959914 5660485 complement(94286..94624) 1 NC_009901.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sbl:Sbal_3980 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 94624 5660485 Spea_0084 Shewanella pealeana ATCC 700345 flagellar hook-basal body complex subunit FliE YP_001499948.1 94286 R 398579 CDS YP_001499949.1 157959915 5660486 complement(94655..95962) 1 NC_009901.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: shw:Sputw3181_0461 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 95962 5660486 Spea_0085 Shewanella pealeana ATCC 700345 sigma-54 dependent trancsriptional regulator YP_001499949.1 94655 R 398579 CDS YP_001499950.1 157959916 5660487 complement(95949..96860) 1 NC_009901.1 PFAM: OmpA/MotB domain protein; KEGG: ppr:PBPRA0019 hypothetical protein; OmpA/MotB domain-containing protein 96860 5660487 Spea_0086 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001499950.1 95949 R 398579 CDS YP_001499951.1 157959917 5660488 97405..98286 1 NC_009901.1 KEGG: sbl:Sbal_3982 hypothetical protein; hypothetical protein 98286 5660488 Spea_0087 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499951.1 97405 D 398579 CDS YP_001499952.1 157959918 5660489 98279..98635 1 NC_009901.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: shw:Sputw3181_0459 flagellar motor switch protein FliN; flagellar motor switch protein FliN 98635 5660489 Spea_0088 Shewanella pealeana ATCC 700345 flagellar motor switch protein FliN YP_001499952.1 98279 D 398579 CDS YP_001499953.1 157959919 5660490 98638..99366 1 NC_009901.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 99366 fliP 5660490 fliP Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FliP YP_001499953.1 98638 D 398579 CDS YP_001499954.1 157959920 5660491 99553..99822 1 NC_009901.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: sbl:Sbal_3985 export protein FliQ, family 3; flagellar biosynthetic protein FliQ 99822 5660491 Spea_0090 Shewanella pealeana ATCC 700345 flagellar biosynthetic protein FliQ YP_001499954.1 99553 D 398579 CDS YP_001499955.1 157959921 5660492 99901..100680 1 NC_009901.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: spc:Sputcn32_3483 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 100680 5660492 Spea_0091 Shewanella pealeana ATCC 700345 flagellar biosynthetic protein FliR YP_001499955.1 99901 D 398579 CDS YP_001499956.1 157959922 5660493 100677..101807 1 NC_009901.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: shw:Sputw3181_0455 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 101807 5660493 Spea_0092 Shewanella pealeana ATCC 700345 flagellar biosynthetic protein FlhB YP_001499956.1 100677 D 398579 CDS YP_001499957.1 157959923 5660494 101823..103904 1 NC_009901.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: shw:Sputw3181_0454 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 103904 5660494 Spea_0093 Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FlhA YP_001499957.1 101823 D 398579 CDS YP_001499958.1 157959924 5660495 complement(103963..104937) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: shn:Shewana3_4119 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 104937 5660495 Spea_0094 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001499958.1 103963 R 398579 CDS YP_001499959.1 157959925 5660496 complement(105266..107065) 1 NC_009901.1 PFAM: protein of unknown function DUF885; KEGG: shn:Shewana3_4118 protein of unknown function DUF885; hypothetical protein 107065 5660496 Spea_0095 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499959.1 105266 R 398579 CDS YP_001499960.1 157959926 5660497 complement(107416..108756) 1 NC_009901.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 108756 5660497 Spea_0096 Shewanella pealeana ATCC 700345 coproporphyrinogen III oxidase YP_001499960.1 107416 R 398579 CDS YP_001499961.1 157959927 5660498 complement(109044..109511) 1 NC_009901.1 KEGG: slo:Shew_3719 hypothetical protein; hypothetical protein 109511 5660498 Spea_0097 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499961.1 109044 R 398579 CDS YP_001499962.1 157959928 5660499 complement(109605..110141) 1 NC_009901.1 PFAM: protein of unknown function DUF414; KEGG: slo:Shew_3718 hypothetical protein; hypothetical protein 110141 5660499 Spea_0098 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499962.1 109605 R 398579 CDS YP_001499963.1 157959929 5660500 complement(110195..110863) 1 NC_009901.1 KEGG: slo:Shew_3717 hypothetical protein; hypothetical protein 110863 5660500 Spea_0099 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499963.1 110195 R 398579 CDS YP_001499964.1 157959930 5660501 complement(111657..112277) 1 NC_009901.1 PFAM: cytochrome c class I; KEGG: spc:Sputcn32_3908 cytochrome c, class I; cytochrome c class I 112277 5660501 Spea_0100 Shewanella pealeana ATCC 700345 cytochrome c class I YP_001499964.1 111657 R 398579 CDS YP_001499965.1 157959931 5660502 112447..113124 1 NC_009901.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 113124 engB 5660502 engB Shewanella pealeana ATCC 700345 ribosome biogenesis GTP-binding protein YsxC YP_001499965.1 112447 D 398579 CDS YP_001499966.1 157959932 5660503 complement(113799..116555) 1 NC_009901.1 KEGG: slo:Shew_3714 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2; DNA polymerase I 116555 5660503 Spea_0102 Shewanella pealeana ATCC 700345 DNA polymerase I YP_001499966.1 113799 R 398579 CDS YP_001499967.1 157959933 5660504 116943..117596 1 NC_009901.1 PFAM: ThiJ/PfpI domain protein; KEGG: shw:Sputw3181_0046 ThiJ/PfpI domain protein; isoprenoid biosynthesis protein with amidotransferase-like domain 117596 5660504 Spea_0103 Shewanella pealeana ATCC 700345 isoprenoid biosynthesis protein with amidotransferase-like domain YP_001499967.1 116943 D 398579 CDS YP_001499968.1 157959934 5660505 complement(117717..118556) 1 NC_009901.1 PFAM: Rhomboid family protein; KEGG: shw:Sputw3181_0047 rhomboid family protein; rhomboid family protein 118556 5660505 Spea_0104 Shewanella pealeana ATCC 700345 rhomboid family protein YP_001499968.1 117717 R 398579 CDS YP_001499969.1 157959935 5660506 complement(118577..118885) 1 NC_009901.1 PFAM: Rhodanese domain protein; KEGG: sfr:Sfri_3940 rhodanese domain protein; rhodanese domain-containing protein 118885 5660506 Spea_0105 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001499969.1 118577 R 398579 CDS YP_001499970.1 157959936 5660507 complement(118993..120018) 1 NC_009901.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 120018 tdh 5660507 tdh Shewanella pealeana ATCC 700345 L-threonine 3-dehydrogenase YP_001499970.1 118993 R 398579 CDS YP_001499971.1 157959937 5660508 complement(120102..121298) 1 NC_009901.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 121298 5660508 Spea_0107 Shewanella pealeana ATCC 700345 2-amino-3-ketobutyrate coenzyme A ligase YP_001499971.1 120102 R 398579 CDS YP_001499972.1 157959938 5660509 complement(121550..122191) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: spc:Sputcn32_3900 transcriptional regulator, TetR family; TetR family transcriptional regulator 122191 5660509 Spea_0108 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001499972.1 121550 R 398579 CDS YP_001499973.1 157959939 5660510 122368..123633 1 NC_009901.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: shw:Sputw3181_0052 three-deoxy-D-manno-octulosonic-acid transferase domain protein; 3-deoxy-D-manno-octulosonic-acid transferase 123633 5660510 Spea_0109 Shewanella pealeana ATCC 700345 3-deoxy-D-manno-octulosonic-acid transferase YP_001499973.1 122368 D 398579 CDS YP_001499974.1 157959940 5660511 complement(123700..124431) 1 NC_009901.1 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 124431 5660511 Spea_0110 Shewanella pealeana ATCC 700345 3-deoxy-D-manno-octulosonic-acid kinase YP_001499974.1 123700 R 398579 CDS YP_001499975.1 157959941 5660512 124517..125596 1 NC_009901.1 PFAM: glycosyl transferase family 9; KEGG: slo:Shew_3702 glycosyl transferase, family 9; glycosyl transferase family protein 125596 5660512 Spea_0111 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001499975.1 124517 D 398579 CDS YP_001499976.1 157959942 5660513 125661..126743 1 NC_009901.1 KEGG: sbl:Sbal_0063 hypothetical protein; hypothetical protein 126743 5660513 Spea_0112 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499976.1 125661 D 398579 CDS YP_001499977.1 157959943 5660514 126743..127828 1 NC_009901.1 PFAM: glycosyl transferase group 1; KEGG: sbm:Shew185_4335 glycosyl transferase group 1; group 1 glycosyl transferase 127828 5660514 Spea_0113 Shewanella pealeana ATCC 700345 group 1 glycosyl transferase YP_001499977.1 126743 D 398579 CDS YP_001499978.1 157959944 5660515 127858..128913 1 NC_009901.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: shm:Shewmr7_3986 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 128913 5660515 Spea_0114 Shewanella pealeana ATCC 700345 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_001499978.1 127858 D 398579 CDS YP_001499979.1 157959945 5660516 complement(128921..129997) 1 NC_009901.1 PFAM: glycosyl transferase group 1; KEGG: shm:Shewmr7_3984 glycosyl transferase, group 1; group 1 glycosyl transferase 129997 5660516 Spea_0115 Shewanella pealeana ATCC 700345 group 1 glycosyl transferase YP_001499979.1 128921 R 398579 CDS YP_001499980.1 157959946 5660517 130187..130930 1 NC_009901.1 PFAM: glycosyl transferase family 25; KEGG: par:Psyc_1207 probable glycosyl transferase family 25, LPS biosynthesis; glycosyl transferase family protein 130930 5660517 Spea_0116 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001499980.1 130187 D 398579 CDS YP_001499981.1 157959947 5660518 131013..131174 1 NC_009901.1 KEGG: sbl:Sbal_0299 hypothetical protein; hypothetical protein 131174 5660518 Spea_0117 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499981.1 131013 D 398579 CDS YP_001499982.1 157959948 5660519 131327..132550 1 NC_009901.1 PFAM: sodium/glutamate symporter; KEGG: slo:Shew_0103 sodium/glutamate symporter; sodium/glutamate symporter 132550 5660519 Spea_0118 Shewanella pealeana ATCC 700345 sodium/glutamate symporter YP_001499982.1 131327 D 398579 CDS YP_001499983.1 157959949 5660520 132694..132978 1 NC_009901.1 KEGG: cps:CPS_0845 hypothetical protein; hypothetical protein 132978 5660520 Spea_0119 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499983.1 132694 D 398579 CDS YP_001499984.1 157959950 5660521 132978..133850 1 NC_009901.1 PFAM: protein of unknown function DUF692; KEGG: sbm:Shew185_3392 protein of unknown function DUF692; hypothetical protein 133850 5660521 Spea_0120 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499984.1 132978 D 398579 CDS YP_001499985.1 157959951 5660522 133841..134626 1 NC_009901.1 KEGG: cvi:CV_3514 hypothetical protein; hypothetical protein 134626 5660522 Spea_0121 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499985.1 133841 D 398579 CDS YP_001499986.1 157959952 5660523 134632..135111 1 NC_009901.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: pde:Pden_4558 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 135111 5660523 Spea_0122 Shewanella pealeana ATCC 700345 ECF subfamily RNA polymerase sigma-24 factor YP_001499986.1 134632 D 398579 CDS YP_001499987.1 157959953 5660524 135114..135884 1 NC_009901.1 hypothetical protein 135884 5660524 Spea_0123 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499987.1 135114 D 398579 CDS YP_001499988.1 157959954 5660525 complement(135909..136391) 1 NC_009901.1 PFAM: protein of unknown function DUF333; KEGG: sbm:Shew185_0128 protein of unknown function DUF333; hypothetical protein 136391 5660525 Spea_0124 Shewanella pealeana ATCC 700345 hypothetical protein YP_001499988.1 135909 R 398579 CDS YP_001499989.1 157959955 5660526 136765..138279 1 NC_009901.1 PFAM: Catalase domain protein; KEGG: sbm:Shew185_0250 catalase; catalase 138279 5660526 Spea_0125 Shewanella pealeana ATCC 700345 catalase YP_001499989.1 136765 D 398579 CDS YP_001499990.1 157959956 5660527 138483..139061 1 NC_009901.1 KEGG: sbm:Shew185_0251 ankyrin; ankyrin 139061 5660527 Spea_0126 Shewanella pealeana ATCC 700345 ankyrin YP_001499990.1 138483 D 398579 CDS YP_001499991.1 157959957 5660528 complement(139162..139932) 1 NC_009901.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 139932 5660528 Spea_0127 Shewanella pealeana ATCC 700345 molybdopterin biosynthesis protein MoeB YP_001499991.1 139162 R 398579 CDS YP_001499992.1 157959958 5660529 complement(139967..141211) 1 NC_009901.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: slo:Shew_0046 molybdenum cofactor synthesis domain protein; molybdenum cofactor synthesis domain-containing protein 141211 5660529 Spea_0128 Shewanella pealeana ATCC 700345 molybdenum cofactor synthesis domain-containing protein YP_001499992.1 139967 R 398579 CDS YP_001499993.1 157959959 5660530 141562..142089 1 NC_009901.1 PFAM: Ferritin Dps family protein; KEGG: slo:Shew_0042 ferritin, Dps family protein; ferroxidase 142089 5660530 Spea_0129 Shewanella pealeana ATCC 700345 ferroxidase YP_001499993.1 141562 D 398579 CDS YP_001499994.1 157959960 5660531 complement(142174..145392) 1 NC_009901.1 KEGG: sbm:Shew185_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; Nitrate and nitrite sensing domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 145392 5660531 Spea_0130 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001499994.1 142174 R 398579 CDS YP_001499995.1 157959961 5660532 complement(145678..146316) 1 NC_009901.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 146316 ribB 5660532 ribB Shewanella pealeana ATCC 700345 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001499995.1 145678 R 398579 CDS YP_001499996.1 157959962 5660533 146933..149083 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: she:Shewmr4_0136 oligopeptidase B; oligopeptidase B 149083 5660533 Spea_0132 Shewanella pealeana ATCC 700345 oligopeptidase B YP_001499996.1 146933 D 398579 CDS YP_001499997.1 157959963 5660534 149083..149442 1 NC_009901.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: sbl:Sbal_4217 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 149442 5660534 Spea_0133 Shewanella pealeana ATCC 700345 excinuclease ABC subunit C YP_001499997.1 149083 D 398579 CDS YP_001499998.1 157959964 5660535 complement(149524..150183) 1 NC_009901.1 KEGG: sde:Sde_0576 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 150183 5660535 Spea_0134 Shewanella pealeana ATCC 700345 signal peptidase I YP_001499998.1 149524 R 398579 CDS YP_001499999.1 157959965 5660536 complement(150597..151352) 1 NC_009901.1 KEGG: shm:Shewmr7_0138 lipoprotein, putative; putative lipoprotein 151352 5660536 Spea_0135 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001499999.1 150597 R 398579 CDS YP_001500000.1 157959966 5660537 151630..152433 1 NC_009901.1 PFAM: thiopurine S-methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: sbm:Shew185_0141 methyltransferase type 12; type 12 methyltransferase 152433 5660537 Spea_0136 Shewanella pealeana ATCC 700345 type 12 methyltransferase YP_001500000.1 151630 D 398579 CDS YP_001500001.1 157959967 5660538 complement(152488..154326) 1 NC_009901.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: sbl:Sbal_4213 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 154326 5660538 Spea_0137 Shewanella pealeana ATCC 700345 peptidase M14 carboxypeptidase A YP_001500001.1 152488 R 398579 CDS YP_001500002.1 157959968 5660539 complement(154511..154720) 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: ccr:CC_2232 transcriptional regulator, Cro/CI family; XRE family transcriptional regulator 154720 5660539 Spea_0138 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001500002.1 154511 R 398579 CDS YP_001500003.1 157959969 5660540 complement(154717..155139) 1 NC_009901.1 KEGG: slo:Shew_3626 hypothetical protein; hypothetical protein 155139 5660540 Spea_0139 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500003.1 154717 R 398579 CDS YP_001500004.1 157959970 5660541 complement(155440..156981) 1 NC_009901.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 156981 5660541 Spea_0140 Shewanella pealeana ATCC 700345 phosphoenolpyruvate carboxykinase YP_001500004.1 155440 R 398579 CDS YP_001500005.1 157959971 5660542 complement(157228..158100) 1 NC_009901.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 158100 hslO 5660542 hslO Shewanella pealeana ATCC 700345 Hsp33-like chaperonin YP_001500005.1 157228 R 398579 CDS YP_001500006.1 157959972 5660543 complement(158117..158515) 1 NC_009901.1 PFAM: RNA-binding S4 domain protein; KEGG: slo:Shew_3621 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 158515 5660543 Spea_0142 Shewanella pealeana ATCC 700345 RNA-binding S4 domain-containing protein YP_001500006.1 158117 R 398579 CDS YP_001500007.1 157959973 5660544 158789..159706 1 NC_009901.1 TIGRFAM: general secretion pathway protein C; KEGG: slo:Shew_3620 general secretion pathway protein C; general secretion pathway protein C 159706 5660544 Spea_0143 Shewanella pealeana ATCC 700345 general secretion pathway protein C YP_001500007.1 158789 D 398579 CDS YP_001500008.1 157959974 5660545 159791..161923 1 NC_009901.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: slo:Shew_3619 general secretion pathway protein D; general secretion pathway protein D 161923 5660545 Spea_0144 Shewanella pealeana ATCC 700345 general secretion pathway protein D YP_001500008.1 159791 D 398579 CDS YP_001500009.1 157959975 5660546 161916..163487 1 NC_009901.1 KEGG: slo:Shew_3618 general secretory pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 163487 5660546 Spea_0145 Shewanella pealeana ATCC 700345 general secretory pathway protein E YP_001500009.1 161916 D 398579 CDS YP_001500010.1 157959976 5660547 163491..164714 1 NC_009901.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: slo:Shew_3617 general secretion pathway protein F; general secretion pathway protein F 164714 5660547 Spea_0146 Shewanella pealeana ATCC 700345 general secretion pathway protein F YP_001500010.1 163491 D 398579 CDS YP_001500011.1 157959977 5660548 164778..165212 1 NC_009901.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: slo:Shew_3616 general secretion pathway protein G; general secretion pathway protein G 165212 5660548 Spea_0147 Shewanella pealeana ATCC 700345 general secretion pathway protein G YP_001500011.1 164778 D 398579 CDS YP_001500012.1 157959978 5660549 165175..165807 1 NC_009901.1 TIGRFAM: general secretion pathway protein H; KEGG: slo:Shew_3615 general secretion pathway protein H; general secretion pathway protein H 165807 5660549 Spea_0148 Shewanella pealeana ATCC 700345 general secretion pathway protein H YP_001500012.1 165175 D 398579 CDS YP_001500013.1 157959979 5660550 165804..166181 1 NC_009901.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: slo:Shew_3614 general secretion pathway protein I; general secretion pathway protein I 166181 5660550 Spea_0149 Shewanella pealeana ATCC 700345 general secretion pathway protein I YP_001500013.1 165804 D 398579 CDS YP_001500014.1 157959980 5660551 166162..166887 1 NC_009901.1 TIGRFAM: general secretion pathway protein J; KEGG: sbl:Sbal_4200 general secretion pathway protein J; general secretion pathway protein J 166887 5660551 Spea_0150 Shewanella pealeana ATCC 700345 general secretion pathway protein J YP_001500014.1 166162 D 398579 CDS YP_001500015.1 157959981 5660552 166887..167867 1 NC_009901.1 PFAM: General secretion pathway protein K; KEGG: slo:Shew_3612 general secretion pathway protein K; general secretion pathway protein K 167867 5660552 Spea_0151 Shewanella pealeana ATCC 700345 general secretion pathway protein K YP_001500015.1 166887 D 398579 CDS YP_001500016.1 157959982 5660553 167912..169105 1 NC_009901.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: shm:Shewmr7_0159 general secretion pathway protein L; general secretion pathway protein L 169105 5660553 Spea_0152 Shewanella pealeana ATCC 700345 general secretion pathway protein L YP_001500016.1 167912 D 398579 CDS YP_001500017.1 157959983 5660554 169107..169583 1 NC_009901.1 PFAM: General secretion pathway M protein; KEGG: slo:Shew_3610 general secretion pathway M protein; general secretion pathway M protein 169583 5660554 Spea_0153 Shewanella pealeana ATCC 700345 general secretion pathway M protein YP_001500017.1 169107 D 398579 CDS YP_001500018.1 157959984 5660555 169593..170351 1 NC_009901.1 PFAM: type II secretion system protein N; KEGG: slo:Shew_3609 type II secretion system protein N; type II secretion system protein N 170351 5660555 Spea_0154 Shewanella pealeana ATCC 700345 type II secretion system protein N YP_001500018.1 169593 D 398579 CDS YP_001500019.1 157959985 5660556 complement(170442..171110) 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sbm:Shew185_0160 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 171110 5660556 Spea_0155 Shewanella pealeana ATCC 700345 HAD family hydrolase YP_001500019.1 170442 R 398579 CDS YP_001500020.1 157959986 5660557 171198..171752 1 NC_009901.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 171752 nudE 5660557 nudE Shewanella pealeana ATCC 700345 ADP-ribose diphosphatase NudE YP_001500020.1 171198 D 398579 CDS YP_001500021.1 157959987 5660558 171797..172606 1 NC_009901.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: slo:Shew_0130 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 172606 5660558 Spea_0157 Shewanella pealeana ATCC 700345 3'(2'),5'-bisphosphate nucleotidase YP_001500021.1 171797 D 398579 CDS YP_001500022.1 157959988 5660559 172599..173060 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_0131 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 173060 5660559 Spea_0158 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500022.1 172599 D 398579 CDS YP_001500023.1 157959989 5660560 173066..174748 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfr:Sfri_0122 phospholipid/glycerol acyltransferase; major facilitator transporter 174748 5660560 Spea_0159 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001500023.1 173066 D 398579 CDS YP_001500024.1 157959990 5660561 complement(174763..175860) 1 NC_009901.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 175860 5660561 Spea_0160 Shewanella pealeana ATCC 700345 tRNA 2-selenouridine synthase YP_001500024.1 174763 R 398579 CDS YP_001500025.1 157959991 5660562 complement(175860..176900) 1 NC_009901.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 176900 5660562 Spea_0161 Shewanella pealeana ATCC 700345 selenophosphate synthetase YP_001500025.1 175860 R 398579 CDS YP_001500026.1 157959992 5660563 complement(177091..178227) 1 NC_009901.1 PFAM: fatty acid desaturase; KEGG: shw:Sputw3181_3679 stearoyl-CoA 9-desaturase; stearoyl-CoA 9-desaturase 178227 5660563 Spea_0162 Shewanella pealeana ATCC 700345 stearoyl-CoA 9-desaturase YP_001500026.1 177091 R 398579 CDS YP_001500027.1 157959993 5660564 178274..178951 1 NC_009901.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 178951 5660564 Spea_0163 Shewanella pealeana ATCC 700345 DNA-binding transcriptional repressor FabR YP_001500027.1 178274 D 398579 CDS YP_001500028.1 157959994 5660565 complement(179017..180114) 1 NC_009901.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 180114 5660565 Spea_0164 Shewanella pealeana ATCC 700345 tRNA (uracil-5-)-methyltransferase YP_001500028.1 179017 R 398579 CDS YP_001500029.1 157959995 5660566 180312..181118 1 NC_009901.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 181118 5660566 Spea_0165 Shewanella pealeana ATCC 700345 glutamate racemase YP_001500029.1 180312 D 398579 CDS YP_001500030.1 157959996 5660567 complement(181132..181587) 1 NC_009901.1 PFAM: RNP-1 like RNA-binding protein; KEGG: slo:Shew_0140 RNP-1-like RNA-binding protein; RNP-1 like RNA-binding protein 181587 5660567 Spea_0166 Shewanella pealeana ATCC 700345 RNP-1 like RNA-binding protein YP_001500030.1 181132 R 398579 CDS YP_001500031.1 157959997 5664656 188407..189432 1 NC_009901.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 189432 murB 5664656 murB Shewanella pealeana ATCC 700345 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001500031.1 188407 D 398579 CDS YP_001500032.1 157959998 5660569 189434..190396 1 NC_009901.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 190396 5660569 Spea_0168 Shewanella pealeana ATCC 700345 biotin--protein ligase YP_001500032.1 189434 D 398579 CDS YP_001500033.1 157959999 5660570 complement(190429..191379) 1 NC_009901.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 191379 5660570 Spea_0169 Shewanella pealeana ATCC 700345 pantothenate kinase YP_001500033.1 190429 R 398579 CDS YP_001500034.1 157960000 5664659 192087..193271 1 NC_009901.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 193271 5664659 Spea_0170 Shewanella pealeana ATCC 700345 elongation factor Tu YP_001500034.1 192087 D 398579 CDS YP_001500035.1 157960001 5660572 193561..193932 1 NC_009901.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 193932 secE 5660572 secE Shewanella pealeana ATCC 700345 preprotein translocase subunit SecE YP_001500035.1 193561 D 398579 CDS YP_001500036.1 157960002 5660573 193942..194493 1 NC_009901.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: slo:Shew_0146 NusG antitermination factor; NusG antitermination factor 194493 5660573 Spea_0172 Shewanella pealeana ATCC 700345 NusG antitermination factor YP_001500036.1 193942 D 398579 CDS YP_001500037.1 157960003 5660574 194619..195047 1 NC_009901.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 195047 rplK 5660574 rplK Shewanella pealeana ATCC 700345 50S ribosomal protein L11 YP_001500037.1 194619 D 398579 CDS YP_001500038.1 157960004 5660575 195052..195753 1 NC_009901.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 195753 rplA 5660575 rplA Shewanella pealeana ATCC 700345 50S ribosomal protein L1 YP_001500038.1 195052 D 398579 CDS YP_001500039.1 157960005 5660576 196021..196518 1 NC_009901.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 196518 rplJ 5660576 rplJ Shewanella pealeana ATCC 700345 50S ribosomal protein L10 YP_001500039.1 196021 D 398579 CDS YP_001500040.1 157960006 5660577 196575..196940 1 NC_009901.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 196940 rplL 5660577 rplL Shewanella pealeana ATCC 700345 50S ribosomal protein L7/L12 YP_001500040.1 196575 D 398579 CDS YP_001500041.1 157960007 5660578 197180..201211 1 NC_009901.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 201211 rpoB 5660578 rpoB Shewanella pealeana ATCC 700345 DNA-directed RNA polymerase subunit beta YP_001500041.1 197180 D 398579 CDS YP_001500042.1 157960008 5660579 201292..205506 1 NC_009901.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 205506 5660579 Spea_0178 Shewanella pealeana ATCC 700345 DNA-directed RNA polymerase subunit beta' YP_001500042.1 201292 D 398579 CDS YP_001500043.1 157960009 5660580 205696..206070 1 NC_009901.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 206070 rpsL 5660580 rpsL Shewanella pealeana ATCC 700345 30S ribosomal protein S12 YP_001500043.1 205696 D 398579 CDS YP_001500044.1 157960010 5660581 206151..206621 1 NC_009901.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 206621 5660581 Spea_0180 Shewanella pealeana ATCC 700345 30S ribosomal protein S7 YP_001500044.1 206151 D 398579 CDS YP_001500045.1 157960011 5660582 206697..208793 1 NC_009901.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 208793 5660582 Spea_0181 Shewanella pealeana ATCC 700345 elongation factor G YP_001500045.1 206697 D 398579 CDS YP_001500046.1 157960012 5660583 208877..210061 1 NC_009901.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 210061 5660583 Spea_0182 Shewanella pealeana ATCC 700345 elongation factor Tu YP_001500046.1 208877 D 398579 CDS YP_001500047.1 157960013 5660584 210423..210734 1 NC_009901.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 210734 rpsJ 5660584 rpsJ Shewanella pealeana ATCC 700345 30S ribosomal protein S10 YP_001500047.1 210423 D 398579 CDS YP_001500048.1 157960014 5660585 210762..211400 1 NC_009901.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 211400 rplC 5660585 rplC Shewanella pealeana ATCC 700345 50S ribosomal protein L3 YP_001500048.1 210762 D 398579 CDS YP_001500049.1 157960015 5660586 211418..212023 1 NC_009901.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 212023 rplD 5660586 rplD Shewanella pealeana ATCC 700345 50S ribosomal protein L4 YP_001500049.1 211418 D 398579 CDS YP_001500050.1 157960016 5660587 212020..212322 1 NC_009901.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 212322 rplW 5660587 rplW Shewanella pealeana ATCC 700345 50S ribosomal protein L23 YP_001500050.1 212020 D 398579 CDS YP_001500051.1 157960017 5660588 212340..213167 1 NC_009901.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 213167 rplB 5660588 rplB Shewanella pealeana ATCC 700345 50S ribosomal protein L2 YP_001500051.1 212340 D 398579 CDS YP_001500052.1 157960018 5660589 213179..213457 1 NC_009901.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 213457 rpsS 5660589 rpsS Shewanella pealeana ATCC 700345 30S ribosomal protein S19 YP_001500052.1 213179 D 398579 CDS YP_001500053.1 157960019 5660590 213473..213805 1 NC_009901.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 213805 rplV 5660590 rplV Shewanella pealeana ATCC 700345 50S ribosomal protein L22 YP_001500053.1 213473 D 398579 CDS YP_001500054.1 157960020 5660591 213815..214504 1 NC_009901.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 214504 rpsC 5660591 rpsC Shewanella pealeana ATCC 700345 30S ribosomal protein S3 YP_001500054.1 213815 D 398579 CDS YP_001500055.1 157960021 5660592 214516..214926 1 NC_009901.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 214926 rplP 5660592 rplP Shewanella pealeana ATCC 700345 50S ribosomal protein L16 YP_001500055.1 214516 D 398579 CDS YP_001500056.1 157960022 5660593 214926..215117 1 NC_009901.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 215117 5660593 Spea_0192 Shewanella pealeana ATCC 700345 50S ribosomal protein L29 YP_001500056.1 214926 D 398579 CDS YP_001500057.1 157960023 5660594 215117..215365 1 NC_009901.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 215365 rpsQ 5660594 rpsQ Shewanella pealeana ATCC 700345 30S ribosomal protein S17 YP_001500057.1 215117 D 398579 CDS YP_001500058.1 157960024 5660595 215545..215913 1 NC_009901.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 215913 rplN 5660595 rplN Shewanella pealeana ATCC 700345 50S ribosomal protein L14 YP_001500058.1 215545 D 398579 CDS YP_001500059.1 157960025 5660596 215925..216239 1 NC_009901.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 216239 rplX 5660596 rplX Shewanella pealeana ATCC 700345 50S ribosomal protein L24 YP_001500059.1 215925 D 398579 CDS YP_001500060.1 157960026 5660597 216253..216792 1 NC_009901.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 216792 rplE 5660597 rplE Shewanella pealeana ATCC 700345 50S ribosomal protein L5 YP_001500060.1 216253 D 398579 CDS YP_001500061.1 157960027 5660598 216803..217108 1 NC_009901.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 217108 rpsN 5660598 rpsN Shewanella pealeana ATCC 700345 30S ribosomal protein S14 YP_001500061.1 216803 D 398579 CDS YP_001500062.1 157960028 5660599 217133..217525 1 NC_009901.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 217525 rpsH 5660599 rpsH Shewanella pealeana ATCC 700345 30S ribosomal protein S8 YP_001500062.1 217133 D 398579 CDS YP_001500063.1 157960029 5660600 217536..218066 1 NC_009901.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 218066 rplF 5660600 rplF Shewanella pealeana ATCC 700345 50S ribosomal protein L6 YP_001500063.1 217536 D 398579 CDS YP_001500064.1 157960030 5660601 218078..218428 1 NC_009901.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 218428 rplR 5660601 rplR Shewanella pealeana ATCC 700345 50S ribosomal protein L18 YP_001500064.1 218078 D 398579 CDS YP_001500065.1 157960031 5660602 218442..218948 1 NC_009901.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 218948 rpsE 5660602 rpsE Shewanella pealeana ATCC 700345 30S ribosomal protein S5 YP_001500065.1 218442 D 398579 CDS YP_001500066.1 157960032 5660603 219027..219140 1 NC_009901.1 TIGRFAM: ribosomal protein L30; KEGG: sfr:Sfri_0166 ribosomal protein L30; 50S ribosomal protein L30 219140 5660603 Spea_0202 Shewanella pealeana ATCC 700345 50S ribosomal protein L30 YP_001500066.1 219027 D 398579 CDS YP_001500067.1 157960033 5660604 219142..219576 1 NC_009901.1 late assembly protein; 50S ribosomal protein L15 219576 rplO 5660604 rplO Shewanella pealeana ATCC 700345 50S ribosomal protein L15 YP_001500067.1 219142 D 398579 CDS YP_001500068.1 157960034 5660605 219584..220924 1 NC_009901.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 220924 secY 5660605 secY Shewanella pealeana ATCC 700345 preprotein translocase subunit SecY YP_001500068.1 219584 D 398579 CDS YP_001500069.1 157960035 5664660 221174..221530 1 NC_009901.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 221530 rpsM 5664660 rpsM Shewanella pealeana ATCC 700345 30S ribosomal protein S13 YP_001500069.1 221174 D 398579 CDS YP_001500070.1 157960036 5660607 221545..221937 1 NC_009901.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 221937 5660607 Spea_0207 Shewanella pealeana ATCC 700345 30S ribosomal protein S11 YP_001500070.1 221545 D 398579 CDS YP_001500071.1 157960037 5660608 221973..222593 1 NC_009901.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 222593 rpsD 5660608 rpsD Shewanella pealeana ATCC 700345 30S ribosomal protein S4 YP_001500071.1 221973 D 398579 CDS YP_001500072.1 157960038 5660609 222618..223607 1 NC_009901.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 223607 5660609 Spea_0209 Shewanella pealeana ATCC 700345 DNA-directed RNA polymerase subunit alpha YP_001500072.1 222618 D 398579 CDS YP_001500073.1 157960039 5660610 223647..224039 1 NC_009901.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 224039 rplQ 5660610 rplQ Shewanella pealeana ATCC 700345 50S ribosomal protein L17 YP_001500073.1 223647 D 398579 CDS YP_001500074.1 157960040 5660611 complement(225056..225544) 1 NC_009901.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 225544 5660611 Spea_0211 Shewanella pealeana ATCC 700345 cytochrome c-type biogenesis protein CcmE YP_001500074.1 225056 R 398579 CDS YP_001500075.1 157960041 5660612 complement(225544..225741) 1 NC_009901.1 PFAM: Heme exporter protein D (CcmD); KEGG: shn:Shewana3_0228 heme exporter protein D (CcmD); Heme exporter protein CcmD 225741 5660612 Spea_0212 Shewanella pealeana ATCC 700345 Heme exporter protein CcmD YP_001500075.1 225544 R 398579 CDS YP_001500076.1 157960042 5660613 complement(225741..226487) 1 NC_009901.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: slo:Shew_0188 heme exporter protein CcmC; heme exporter protein CcmC 226487 5660613 Spea_0213 Shewanella pealeana ATCC 700345 heme exporter protein CcmC YP_001500076.1 225741 R 398579 CDS YP_001500077.1 157960043 5660614 complement(226489..227175) 1 NC_009901.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: saz:Sama_0244 heme exporter protein CcmB; heme exporter protein CcmB 227175 5660614 Spea_0214 Shewanella pealeana ATCC 700345 heme exporter protein CcmB YP_001500077.1 226489 R 398579 CDS YP_001500078.1 157960044 5660615 complement(227185..227835) 1 NC_009901.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 227835 5660615 Spea_0215 Shewanella pealeana ATCC 700345 cytochrome c biogenesis protein CcmA YP_001500078.1 227185 R 398579 CDS YP_001500079.1 157960045 5660616 228156..228449 1 NC_009901.1 PFAM: cytochrome c class I; KEGG: sfr:Sfri_0180 cytochrome c, class I; cytochrome c class I 228449 5660616 Spea_0216 Shewanella pealeana ATCC 700345 cytochrome c class I YP_001500079.1 228156 D 398579 CDS YP_001500080.1 157960046 5660617 complement(229230..230483) 1 NC_009901.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: slo:Shew_0192 TPR repeat-containing protein; hypothetical protein 230483 5660617 Spea_0217 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500080.1 229230 R 398579 CDS YP_001500081.1 157960047 5660618 230915..232894 1 NC_009901.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 232894 5660618 Spea_0218 Shewanella pealeana ATCC 700345 cytochrome c-type biogenesis protein CcmF YP_001500081.1 230915 D 398579 CDS YP_001500082.1 157960048 5660619 232912..233466 1 NC_009901.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO_0267 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 233466 5660619 Spea_0219 Shewanella pealeana ATCC 700345 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001500082.1 232912 D 398579 CDS YP_001500083.1 157960049 5660620 233478..233945 1 NC_009901.1 PFAM: cytochrome C biogenesis protein; KEGG: slo:Shew_0195 cytochrome c biogenesis protein; cytochrome C biogenesis protein 233945 5660620 Spea_0220 Shewanella pealeana ATCC 700345 cytochrome C biogenesis protein YP_001500083.1 233478 D 398579 CDS YP_001500084.1 157960050 5660621 233942..234538 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: slo:Shew_0196 redoxin domain protein; alkyl hydroperoxide reductase 234538 5660621 Spea_0221 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001500084.1 233942 D 398579 CDS YP_001500085.1 157960051 5664663 complement(240710..241726) 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 241726 5664663 Spea_0222 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001500085.1 240710 R 398579 CDS YP_001500086.1 157960052 5664668 249650..250924 1 NC_009901.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: sbm:Shew185_4098 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA 250924 5664668 Spea_0223 Shewanella pealeana ATCC 700345 competence/damage-inducible protein CinA YP_001500086.1 249650 D 398579 CDS YP_001500087.1 157960053 5660624 complement(251001..251543) 1 NC_009901.1 PFAM: protein of unknown function DUF1439; KEGG: slo:Shew_0199 protein of unknown function DUF1439; hypothetical protein 251543 5660624 Spea_0224 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500087.1 251001 R 398579 CDS YP_001500088.1 157960054 5660625 complement(251543..254179) 1 NC_009901.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 254179 5660625 Spea_0225 Shewanella pealeana ATCC 700345 phosphoenolpyruvate carboxylase YP_001500088.1 251543 R 398579 CDS YP_001500089.1 157960055 5660626 complement(254347..255498) 1 NC_009901.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 255498 5660626 Spea_0226 Shewanella pealeana ATCC 700345 acetylornithine deacetylase YP_001500089.1 254347 R 398579 CDS YP_001500090.1 157960056 5660627 255774..256763 1 NC_009901.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 256763 argC 5660627 argC Shewanella pealeana ATCC 700345 N-acetyl-gamma-glutamyl-phosphate reductase YP_001500090.1 255774 D 398579 CDS YP_001500091.1 157960057 5660628 256782..257585 1 NC_009901.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 257585 5660628 Spea_0228 Shewanella pealeana ATCC 700345 acetylglutamate kinase YP_001500091.1 256782 D 398579 CDS YP_001500092.1 157960058 5660629 257598..258503 1 NC_009901.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 258503 5660629 Spea_0229 Shewanella pealeana ATCC 700345 ornithine carbamoyltransferase YP_001500092.1 257598 D 398579 CDS YP_001500093.1 157960059 5660630 258575..259813 1 NC_009901.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 259813 5660630 Spea_0230 Shewanella pealeana ATCC 700345 argininosuccinate synthase YP_001500093.1 258575 D 398579 CDS YP_001500094.1 157960060 5660631 259924..261294 1 NC_009901.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 261294 5660631 Spea_0231 Shewanella pealeana ATCC 700345 argininosuccinate lyase YP_001500094.1 259924 D 398579 CDS YP_001500095.1 157960061 5660632 complement(261398..263947) 1 NC_009901.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: sbm:Shew185_4090 penicillin-binding protein, 1A family; 1A family penicillin-binding protein 263947 5660632 Spea_0232 Shewanella pealeana ATCC 700345 1A family penicillin-binding protein YP_001500095.1 261398 R 398579 CDS YP_001500096.1 157960062 5660633 264383..265462 1 NC_009901.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: slo:Shew_0208 type IV pilus assembly protein PilM; type IV pilus assembly protein PilM 265462 5660633 Spea_0233 Shewanella pealeana ATCC 700345 type IV pilus assembly protein PilM YP_001500096.1 264383 D 398579 CDS YP_001500097.1 157960063 5660634 265450..266031 1 NC_009901.1 PFAM: Fimbrial assembly family protein; KEGG: slo:Shew_0209 fimbrial assembly family protein; fimbrial assembly family protein 266031 5660634 Spea_0234 Shewanella pealeana ATCC 700345 fimbrial assembly family protein YP_001500097.1 265450 D 398579 CDS YP_001500098.1 157960064 5660635 266028..266648 1 NC_009901.1 PFAM: Pilus assembly protein PilO; KEGG: sfr:Sfri_0372 pilus assembly protein, PilO; pilus assembly protein PilO 266648 5660635 Spea_0235 Shewanella pealeana ATCC 700345 pilus assembly protein PilO YP_001500098.1 266028 D 398579 CDS YP_001500099.1 157960065 5660636 266645..267163 1 NC_009901.1 PFAM: Pilus assembly protein PilP; KEGG: slo:Shew_0211 pilus assembly protein, PilQ; pilus assembly protein PilP 267163 5660636 Spea_0236 Shewanella pealeana ATCC 700345 pilus assembly protein PilP YP_001500099.1 266645 D 398579 CDS YP_001500100.1 157960066 5660637 267170..269236 1 NC_009901.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: slo:Shew_0212 type IV pilus secretin PilQ; type IV pilus secretin PilQ 269236 5660637 Spea_0237 Shewanella pealeana ATCC 700345 type IV pilus secretin PilQ YP_001500100.1 267170 D 398579 CDS YP_001500101.1 157960067 5660638 269451..269966 1 NC_009901.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 269966 aroK 5660638 aroK Shewanella pealeana ATCC 700345 shikimate kinase I YP_001500101.1 269451 D 398579 CDS YP_001500102.1 157960068 5660639 269970..271049 1 NC_009901.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 271049 aroB 5660639 aroB Shewanella pealeana ATCC 700345 3-dehydroquinate synthase YP_001500102.1 269970 D 398579 CDS YP_001500103.1 157960069 5660640 271213..272694 1 NC_009901.1 PFAM: Sporulation domain protein; KEGG: slo:Shew_0215 sporulation domain protein; sporulation domain-containing protein 272694 5660640 Spea_0240 Shewanella pealeana ATCC 700345 sporulation domain-containing protein YP_001500103.1 271213 D 398579 CDS YP_001500104.1 157960070 5660641 272749..273588 1 NC_009901.1 KEGG: slo:Shew_0216 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 273588 5660641 Spea_0241 Shewanella pealeana ATCC 700345 DNA adenine methylase YP_001500104.1 272749 D 398579 CDS YP_001500105.1 157960071 5660642 complement(273637..273822) 1 NC_009901.1 KEGG: sfr:Sfri_0379 hypothetical protein; hypothetical protein 273822 5660642 Spea_0242 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500105.1 273637 R 398579 CDS YP_001500106.1 157960072 5660643 complement(273831..274172) 1 NC_009901.1 KEGG: slo:Shew_0218 hypothetical protein; hypothetical protein 274172 5660643 Spea_0243 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500106.1 273831 R 398579 CDS YP_001500107.1 157960073 5660644 274371..275045 1 NC_009901.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: slo:Shew_0219 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 275045 5660644 Spea_0244 Shewanella pealeana ATCC 700345 ribulose-phosphate 3-epimerase YP_001500107.1 274371 D 398579 CDS YP_001500108.1 157960074 5660645 275049..275747 1 NC_009901.1 TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: shw:Sputw3181_3841 phosphoglycolate phosphatase; phosphoglycolate phosphatase 275747 5660645 Spea_0245 Shewanella pealeana ATCC 700345 phosphoglycolate phosphatase YP_001500108.1 275049 D 398579 CDS YP_001500109.1 157960075 5660646 275753..276763 1 NC_009901.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 276763 5660646 Spea_0246 Shewanella pealeana ATCC 700345 tryptophanyl-tRNA synthetase YP_001500109.1 275753 D 398579 CDS YP_001500110.1 157960076 5660647 complement(276830..277699) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sfr:Sfri_0384 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 277699 5660647 Spea_0247 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500110.1 276830 R 398579 CDS YP_001500111.1 157960077 5660648 277842..278726 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sfr:Sfri_0385 protein of unknown function DUF6, transmembrane; hypothetical protein 278726 5660648 Spea_0248 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500111.1 277842 D 398579 CDS YP_001500112.1 157960078 5660649 complement(278764..279333) 1 NC_009901.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: slo:Shew_0224 transport-associated; transport-associated 279333 5660649 Spea_0249 Shewanella pealeana ATCC 700345 transport-associated YP_001500112.1 278764 R 398579 CDS YP_001500113.1 157960079 5660650 complement(279330..279923) 1 NC_009901.1 TIGRFAM: phosphoheptose isomerase; KEGG: shw:Sputw3181_3836 phosphoheptose isomerase; phosphoheptose isomerase 279923 5660650 Spea_0250 Shewanella pealeana ATCC 700345 phosphoheptose isomerase YP_001500113.1 279330 R 398579 CDS YP_001500114.1 157960080 5660651 complement(279997..280335) 1 NC_009901.1 PFAM: protein of unknown function UPF0102; KEGG: sbm:Shew185_4070 protein of unknown function UPF0102; hypothetical protein 280335 5660651 Spea_0251 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500114.1 279997 R 398579 CDS YP_001500115.1 157960081 5660652 complement(280449..282323) 1 NC_009901.1 PFAM: LppC family lipoprotein; KEGG: slo:Shew_0227 LppC family lipoprotein; LppC family lipoprotein 282323 5660652 Spea_0252 Shewanella pealeana ATCC 700345 LppC family lipoprotein YP_001500115.1 280449 R 398579 CDS YP_001500116.1 157960082 5660653 282426..283268 1 NC_009901.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: slo:Shew_0228 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 283268 5660653 Spea_0253 Shewanella pealeana ATCC 700345 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001500116.1 282426 D 398579 CDS YP_001500117.1 157960083 5664669 complement(284069..285322) 1 NC_009901.1 KEGG: slo:Shew_3355 hypothetical protein; hypothetical protein 285322 5664669 Spea_0254 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500117.1 284069 R 398579 CDS YP_001500118.1 157960084 5660655 complement(285322..286578) 1 NC_009901.1 KEGG: ppr:PBPRB1788 putative glycine betaine ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase 286578 5660655 Spea_0255 Shewanella pealeana ATCC 700345 glycine betaine/L-proline ABC transporter ATPase YP_001500118.1 285322 R 398579 CDS YP_001500119.1 157960085 5660656 complement(286571..287470) 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vha:VIBHAR_06563 hypothetical protein; binding-protein-dependent transport system inner membrane protein 287470 5660656 Spea_0256 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001500119.1 286571 R 398579 CDS YP_001500120.1 157960086 5660657 complement(287555..288559) 1 NC_009901.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ppr:PBPRB1790 hypothetical ABC transporter, substrate binding protein; substrate-binding region of ABC-type glycine betaine transport system 288559 5660657 Spea_0257 Shewanella pealeana ATCC 700345 substrate-binding region of ABC-type glycine betaine transport system YP_001500120.1 287555 R 398579 CDS YP_001500121.1 157960087 5660658 complement(289108..290049) 1 NC_009901.1 PFAM: LysR substrate-binding; KEGG: vfi:VFA1061 transcriptional regulators, LysR family; LysR family transcriptional regulator 290049 5660658 Spea_0258 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500121.1 289108 R 398579 CDS YP_001500122.1 157960088 5660659 290648..291535 1 NC_009901.1 KEGG: esa:ESA_03864 hypothetical protein; hypothetical protein 291535 5660659 Spea_0259 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500122.1 290648 D 398579 CDS YP_001500123.1 157960089 5660660 291532..292218 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: gur:Gura_1944 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 292218 5660660 Spea_0260 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001500123.1 291532 D 398579 CDS YP_001500124.1 157960090 5660661 292227..294368 1 NC_009901.1 PFAM: Aldehyde ferredoxin oxidoreductase; KEGG: pth:PTH_0610 aldehyde:ferredoxin oxidoreductase; aldehyde ferredoxin oxidoreductase 294368 5660661 Spea_0261 Shewanella pealeana ATCC 700345 aldehyde ferredoxin oxidoreductase YP_001500124.1 292227 D 398579 CDS YP_001500125.1 157960091 5660662 294373..294726 1 NC_009901.1 hypothetical protein 294726 5660662 Spea_0262 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500125.1 294373 D 398579 CDS YP_001500126.1 157960092 5660663 295190..295933 1 NC_009901.1 hypothetical protein 295933 5660663 Spea_0263 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500126.1 295190 D 398579 CDS YP_001500127.1 157960093 5660664 complement(296091..297299) 1 NC_009901.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: vfi:VF2364 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 297299 5660664 Spea_0264 Shewanella pealeana ATCC 700345 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001500127.1 296091 R 398579 CDS YP_001500128.1 157960094 5660665 297718..299088 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pin:Ping_2274 sensory transduction histidine kinase; diguanylate cyclase 299088 5660665 Spea_0265 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001500128.1 297718 D 398579 CDS YP_001500129.1 157960095 5660666 complement(299132..300001) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sfr:Sfri_3440 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 300001 5660666 Spea_0266 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500129.1 299132 R 398579 CDS YP_001500130.1 157960096 5660667 300361..300918 1 NC_009901.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 300918 5660667 Spea_0267 Shewanella pealeana ATCC 700345 glutathione-dependent formaldehyde-activating protein YP_001500130.1 300361 D 398579 CDS YP_001500131.1 157960097 5660668 301314..301580 1 NC_009901.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: maq:Maqu_2983 transcriptional regulator, TraR/DksA family; hypothetical protein 301580 5660668 Spea_0268 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500131.1 301314 D 398579 CDS YP_001500132.1 157960098 5660669 301818..302948 1 NC_009901.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sfr:Sfri_3427 alcohol dehydrogenase GroES domain protein; S-(hydroxymethyl)glutathione dehydrogenase 302948 5660669 Spea_0269 Shewanella pealeana ATCC 700345 S-(hydroxymethyl)glutathione dehydrogenase YP_001500132.1 301818 D 398579 CDS YP_001500133.1 157960099 5660670 303077..303916 1 NC_009901.1 KEGG: sfr:Sfri_3426 carboxylesterase; TIGRFAM: S-formylglutathione hydrolase; PFAM: putative esterase; S-formylglutathione hydrolase 303916 5660670 Spea_0270 Shewanella pealeana ATCC 700345 S-formylglutathione hydrolase YP_001500133.1 303077 D 398579 CDS YP_001500134.1 157960100 5660671 304145..304471 1 NC_009901.1 PFAM: small multidrug resistance protein; KEGG: sfr:Sfri_3425 small multidrug resistance protein; small multidrug resistance protein 304471 5660671 Spea_0271 Shewanella pealeana ATCC 700345 small multidrug resistance protein YP_001500134.1 304145 D 398579 CDS YP_001500135.1 157960101 5660672 complement(304614..305261) 1 NC_009901.1 KEGG: pin:Ping_1347 hypothetical protein; hypothetical protein 305261 5660672 Spea_0272 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500135.1 304614 R 398579 CDS YP_001500136.1 157960102 5660673 complement(305322..306017) 1 NC_009901.1 KEGG: pin:Ping_1348 hypothetical protein; hypothetical protein 306017 5660673 Spea_0273 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500136.1 305322 R 398579 CDS YP_001500137.1 157960103 5660674 complement(306153..306620) 1 NC_009901.1 hypothetical protein 306620 5660674 Spea_0274 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500137.1 306153 R 398579 CDS YP_001500138.1 157960104 5660675 306836..307255 1 NC_009901.1 KEGG: saz:Sama_3582 hypothetical protein; hypothetical protein 307255 5660675 Spea_0275 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500138.1 306836 D 398579 CDS YP_001500139.1 157960105 5660676 complement(307433..309118) 1 NC_009901.1 KEGG: slo:Shew_0230 hypothetical protein; hypothetical protein 309118 5660676 Spea_0276 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500139.1 307433 R 398579 CDS YP_001500140.1 157960106 5660677 complement(309273..310493) 1 NC_009901.1 PFAM: protein of unknown function DUF1212; KEGG: slo:Shew_0231 protein of unknown function DUF1212; hypothetical protein 310493 5660677 Spea_0277 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500140.1 309273 R 398579 CDS YP_001500141.1 157960107 5660678 310696..311106 1 NC_009901.1 KEGG: sbl:Sbal_4091 hypothetical protein; hypothetical protein 311106 5660678 Spea_0278 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500141.1 310696 D 398579 CDS YP_001500142.1 157960108 5660679 311327..313660 1 NC_009901.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: slo:Shew_0233 radical SAM N-terminal domain protein; hypothetical protein 313660 5660679 Spea_0279 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500142.1 311327 D 398579 CDS YP_001500143.1 157960109 5660680 313840..314193 1 NC_009901.1 PFAM: protein of unknown function DUF1232; KEGG: slo:Shew_0234 protein of unknown function DUF1232; hypothetical protein 314193 5660680 Spea_0280 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500143.1 313840 D 398579 CDS YP_001500144.1 157960110 5660681 complement(314232..315161) 1 NC_009901.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: vpa:VP1745 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 315161 5660681 Spea_0281 Shewanella pealeana ATCC 700345 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_001500144.1 314232 R 398579 CDS YP_001500145.1 157960111 5660682 315351..315935 1 NC_009901.1 KEGG: slo:Shew_0246 hypothetical protein; hypothetical protein 315935 5660682 Spea_0282 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500145.1 315351 D 398579 CDS YP_001500146.1 157960112 5660683 complement(316110..316676) 1 NC_009901.1 KEGG: slo:Shew_0256 hypothetical protein; hypothetical protein 316676 5660683 Spea_0283 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500146.1 316110 R 398579 CDS YP_001500147.1 157960113 5660684 complement(316835..318895) 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: slo:Shew_0257 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 318895 5660684 Spea_0284 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001500147.1 316835 R 398579 CDS YP_001500148.1 157960114 5660685 complement(319053..319958) 1 NC_009901.1 KEGG: slo:Shew_0258 hypothetical protein; hypothetical protein 319958 5660685 Spea_0285 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500148.1 319053 R 398579 CDS YP_001500149.1 157960115 5660686 complement(320108..322765) 1 NC_009901.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: vfi:VFA1016 sensory transduction protein kinase; histidine kinase 322765 5660686 Spea_0286 Shewanella pealeana ATCC 700345 histidine kinase YP_001500149.1 320108 R 398579 CDS YP_001500150.1 157960116 5660687 322868..323368 1 NC_009901.1 KEGG: ppr:PBPRB1153 hypothetical protein; hypothetical protein 323368 5660687 Spea_0287 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500150.1 322868 D 398579 CDS YP_001500151.1 157960117 5660688 323371..324408 1 NC_009901.1 KEGG: ppr:PBPRB1154 hypothetical protein; hypothetical protein 324408 5660688 Spea_0288 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500151.1 323371 D 398579 CDS YP_001500152.1 157960118 5660689 324408..324668 1 NC_009901.1 hypothetical protein 324668 5660689 Spea_0289 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500152.1 324408 D 398579 CDS YP_001500153.1 157960119 5660690 complement(324686..325642) 1 NC_009901.1 KEGG: esa:ESA_01836 hypothetical protein; hypothetical protein 325642 5660690 Spea_0290 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500153.1 324686 R 398579 CDS YP_001500154.1 157960120 5660691 complement(325724..327178) 1 NC_009901.1 KEGG: ana:alr3755 unknown protein; hypothetical protein 327178 5660691 Spea_0291 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500154.1 325724 R 398579 CDS YP_001500155.1 157960121 5660692 complement(327198..327524) 1 NC_009901.1 KEGG: vfi:VFA1013 hypothetical protein; hypothetical protein 327524 5660692 Spea_0292 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500155.1 327198 R 398579 CDS YP_001500156.1 157960122 5660693 complement(327573..328862) 1 NC_009901.1 KEGG: afm:AFUA_3G10400 dolichol-phosphate mannosyltransferase, putative; hypothetical protein 328862 5660693 Spea_0293 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500156.1 327573 R 398579 CDS YP_001500157.1 157960123 5660694 complement(329048..330052) 1 NC_009901.1 hypothetical protein 330052 5660694 Spea_0294 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500157.1 329048 R 398579 CDS YP_001500158.1 157960124 5660695 complement(330042..331430) 1 NC_009901.1 KEGG: esa:ESA_01830 hypothetical protein; hypothetical protein 331430 5660695 Spea_0295 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500158.1 330042 R 398579 CDS YP_001500159.1 157960125 5660696 complement(331453..332847) 1 NC_009901.1 KEGG: esa:ESA_01831 hypothetical protein; hypothetical protein 332847 5660696 Spea_0296 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500159.1 331453 R 398579 CDS YP_001500160.1 157960126 5660697 complement(332858..334183) 1 NC_009901.1 KEGG: ava:Ava_1569 hypothetical protein; hypothetical protein 334183 5660697 Spea_0297 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500160.1 332858 R 398579 CDS YP_001500161.1 157960127 5660698 complement(334170..336026) 1 NC_009901.1 PFAM: glycosyl transferase family 2; KEGG: esa:ESA_01833 hypothetical protein; cellulose synthase 336026 5660698 Spea_0298 Shewanella pealeana ATCC 700345 cellulose synthase YP_001500161.1 334170 R 398579 CDS YP_001500162.1 157960128 5660699 complement(336076..336519) 1 NC_009901.1 KEGG: vpa:VPA1048 putative anti-sigma F factor antagonist; putative anti-sigma regulatory factor 336519 5660699 Spea_0299 Shewanella pealeana ATCC 700345 putative anti-sigma regulatory factor YP_001500162.1 336076 R 398579 CDS YP_001500163.1 157960129 5660700 complement(336532..337725) 1 NC_009901.1 PFAM: Nucleotidyl transferase; KEGG: ana:alr3400 mannose-1-phosphate guanyltransferase; nucleotidyl transferase 337725 5660700 Spea_0300 Shewanella pealeana ATCC 700345 nucleotidyl transferase YP_001500163.1 336532 R 398579 CDS YP_001500164.1 157960130 5660701 complement(337739..338071) 1 NC_009901.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rsh:Rsph17029_0151 anti-sigma-factor antagonist; anti-sigma-factor antagonist 338071 5660701 Spea_0301 Shewanella pealeana ATCC 700345 anti-sigma-factor antagonist YP_001500164.1 337739 R 398579 CDS YP_001500165.1 157960131 5660702 complement(338086..339288) 1 NC_009901.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: vha:VIBHAR_05599 hypothetical protein; response regulator receiver modulated serine phosphatase 339288 5660702 Spea_0302 Shewanella pealeana ATCC 700345 response regulator receiver modulated serine phosphatase YP_001500165.1 338086 R 398579 CDS YP_001500166.1 157960132 5660703 complement(339521..339913) 1 NC_009901.1 KEGG: slo:Shew_0259 hypothetical protein; hypothetical protein 339913 5660703 Spea_0303 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500166.1 339521 R 398579 CDS YP_001500167.1 157960133 5660704 340442..343084 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shw:Sputw3181_3091 TonB-dependent receptor; TonB-dependent receptor 343084 5660704 Spea_0304 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500167.1 340442 D 398579 CDS YP_001500168.1 157960134 5660705 343190..345226 1 NC_009901.1 PFAM: EAL domain protein; phosphotransferase system EIIC; KEGG: vha:VIBHAR_05166 hypothetical protein; diguanylate phosphodiesterase 345226 5660705 Spea_0305 Shewanella pealeana ATCC 700345 diguanylate phosphodiesterase YP_001500168.1 343190 D 398579 CDS YP_001500169.1 157960135 5660706 345407..346249 1 NC_009901.1 KEGG: slo:Shew_0260 hypothetical protein; hypothetical protein 346249 5660706 Spea_0306 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500169.1 345407 D 398579 CDS YP_001500170.1 157960136 5660707 346417..346680 1 NC_009901.1 KEGG: slo:Shew_0261 hypothetical protein; hypothetical protein 346680 5660707 Spea_0307 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500170.1 346417 D 398579 CDS YP_001500171.1 157960137 5660708 346748..348199 1 NC_009901.1 PFAM: protein of unknown function UPF0061; KEGG: she:Shewmr4_3645 protein of unknown function UPF0061; hypothetical protein 348199 5660708 Spea_0308 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500171.1 346748 D 398579 CDS YP_001500172.1 157960138 5660709 348231..348527 1 NC_009901.1 KEGG: shn:Shewana3_3840 hypothetical protein; hypothetical protein 348527 5660709 Spea_0309 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500172.1 348231 D 398579 CDS YP_001500173.1 157960139 5660710 348616..349644 1 NC_009901.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 349644 5660710 Spea_0310 Shewanella pealeana ATCC 700345 serine/threonine protein kinase YP_001500173.1 348616 D 398579 CDS YP_001500174.1 157960140 5660711 349770..350381 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: slo:Shew_0265 DsbA oxidoreductase; DSBA oxidoreductase 350381 5660711 Spea_0311 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001500174.1 349770 D 398579 CDS YP_001500175.1 157960141 5660712 350570..350782 1 NC_009901.1 PFAM: protein of unknown function DUF1107; KEGG: shw:Sputw3181_3796 protein of unknown function DUF1107; hypothetical protein 350782 5660712 Spea_0312 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500175.1 350570 D 398579 CDS YP_001500176.1 157960142 5660713 complement(350796..350999) 1 NC_009901.1 PFAM: protein of unknown function DUF904; KEGG: slo:Shew_0267 protein of unknown function DUF904; hypothetical protein 350999 5660713 Spea_0313 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500176.1 350796 R 398579 CDS YP_001500177.1 157960143 5660714 351180..352661 1 NC_009901.1 PFAM: Citrate transporter; Na+/H+ antiporter NhaC; KEGG: sbm:Shew185_4032 Na+ antiporter NhaC; Na+/H+ antiporter NhaC 352661 5660714 Spea_0314 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001500177.1 351180 D 398579 CDS YP_001500178.1 157960144 5660715 complement(352769..353389) 1 NC_009901.1 KEGG: slo:Shew_0270 hypothetical protein; hypothetical protein 353389 5660715 Spea_0315 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500178.1 352769 R 398579 CDS YP_001500179.1 157960145 5660716 353631..354974 1 NC_009901.1 KEGG: slo:Shew_0271 phospholipase; phospholipase 354974 5660716 Spea_0316 Shewanella pealeana ATCC 700345 phospholipase YP_001500179.1 353631 D 398579 CDS YP_001500180.1 157960146 5660717 355250..356146 1 NC_009901.1 KEGG: vvy:VVA0223 hypothetical protein; hypothetical protein 356146 5660717 Spea_0317 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500180.1 355250 D 398579 CDS YP_001500181.1 157960147 5660718 356147..357073 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: ppr:PBPRB0984 hypothetical protein; alpha/beta hydrolase fold protein 357073 5660718 Spea_0318 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001500181.1 356147 D 398579 CDS YP_001500182.1 157960148 5660719 357070..358371 1 NC_009901.1 KEGG: vpa:VP1355 hypothetical protein; hypothetical protein 358371 5660719 Spea_0319 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500182.1 357070 D 398579 CDS YP_001500183.1 157960149 5660720 358368..359618 1 NC_009901.1 KEGG: vpa:VP1356 hypothetical protein; hypothetical protein 359618 5660720 Spea_0320 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500183.1 358368 D 398579 CDS YP_001500184.1 157960150 5660721 complement(359683..360426) 1 NC_009901.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: slo:Shew_0272 cupin 2, conserved barrel domain protein; cupin 360426 5660721 Spea_0321 Shewanella pealeana ATCC 700345 cupin YP_001500184.1 359683 R 398579 CDS YP_001500185.1 157960151 5660722 complement(360604..361692) 1 NC_009901.1 KEGG: son:SO_1411 hypothetical protein; hypothetical protein 361692 5660722 Spea_0322 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500185.1 360604 R 398579 CDS YP_001500186.1 157960152 5660723 complement(361966..363105) 1 NC_009901.1 KEGG: slo:Shew_0274 hypothetical protein; hypothetical protein 363105 5660723 Spea_0323 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500186.1 361966 R 398579 CDS YP_001500187.1 157960153 5660724 complement(363153..363521) 1 NC_009901.1 KEGG: slo:Shew_0275 tetraheme cytochrome c, putative; tetraheme cytochrome c 363521 5660724 Spea_0324 Shewanella pealeana ATCC 700345 tetraheme cytochrome c YP_001500187.1 363153 R 398579 CDS YP_001500188.1 157960154 5660725 complement(363521..365044) 1 NC_009901.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slo:Shew_0276 flavocytochrome c; flavocytochrome c 365044 5660725 Spea_0325 Shewanella pealeana ATCC 700345 flavocytochrome c YP_001500188.1 363521 R 398579 CDS YP_001500189.1 157960155 5660726 365389..366180 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: sbm:Shew185_2533 transcriptional regulator, TetR family; TetR family transcriptional regulator 366180 5660726 Spea_0326 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001500189.1 365389 D 398579 CDS YP_001500190.1 157960156 5660727 366353..367444 1 NC_009901.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 367444 5660727 Spea_0327 Shewanella pealeana ATCC 700345 branched-chain amino acid aminotransferase YP_001500190.1 366353 D 398579 CDS YP_001500191.1 157960157 5660728 complement(367542..367940) 1 NC_009901.1 hypothetical protein 367940 5660728 Spea_0328 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500191.1 367542 R 398579 CDS YP_001500192.1 157960158 5660729 complement(368228..369178) 1 NC_009901.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3626 phospholipid/glycerol acyltransferase; putative acyltransferase 369178 5660729 Spea_0329 Shewanella pealeana ATCC 700345 putative acyltransferase YP_001500192.1 368228 R 398579 CDS YP_001500193.1 157960159 5660730 complement(369186..370091) 1 NC_009901.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: slo:Shew_0282 phospholipid/glycerol acyltransferase; putative acyltransferase 370091 5660730 Spea_0330 Shewanella pealeana ATCC 700345 putative acyltransferase YP_001500193.1 369186 R 398579 CDS YP_001500194.1 157960160 5660731 complement(370305..371834) 1 NC_009901.1 PFAM: EAL domain protein; KEGG: swi:Swit_2925 EAL domain protein; EAL domain-containing protein 371834 5660731 Spea_0331 Shewanella pealeana ATCC 700345 EAL domain-containing protein YP_001500194.1 370305 R 398579 CDS YP_001500195.1 157960161 5660732 complement(372147..373667) 1 NC_009901.1 KEGG: sbl:Sbal_4042 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 373667 5660732 Spea_0332 Shewanella pealeana ATCC 700345 Mg chelatase subunit ChlI YP_001500195.1 372147 R 398579 CDS YP_001500196.1 157960162 5660733 374320..376035 1 NC_009901.1 PFAM: KAP P-loop domain protein; KEGG: sdn:Sden_3526 kap P-loop; KAP P-loop domain-containing protein 376035 5660733 Spea_0333 Shewanella pealeana ATCC 700345 KAP P-loop domain-containing protein YP_001500196.1 374320 D 398579 CDS YP_001500197.1 157960163 5660734 complement(376866..378122) 1 NC_009901.1 PFAM: histidine kinase A domain protein; KEGG: vha:VIBHAR_05571 hypothetical protein; histidine kinase 378122 5660734 Spea_0334 Shewanella pealeana ATCC 700345 histidine kinase YP_001500197.1 376866 R 398579 CDS YP_001500198.1 157960164 5660735 complement(378094..378762) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: vha:VIBHAR_05570 hypothetical protein; two component transcriptional regulator 378762 5660735 Spea_0335 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001500198.1 378094 R 398579 CDS YP_001500199.1 157960165 5660736 378856..380070 1 NC_009901.1 KEGG: vha:VIBHAR_05569 hypothetical protein; hypothetical protein 380070 5660736 Spea_0336 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500199.1 378856 D 398579 CDS YP_001500200.1 157960166 5660737 380368..381921 1 NC_009901.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: vpa:VPA0596 putative methyl-accepting chemotaxis protein; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 381921 5660737 Spea_0337 Shewanella pealeana ATCC 700345 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001500200.1 380368 D 398579 CDS YP_001500201.1 157960167 5660738 complement(382112..383764) 1 NC_009901.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO_3299 Pal/histidase family protein; phenylalanine/histidine ammonia-lyase 383764 5660738 Spea_0338 Shewanella pealeana ATCC 700345 phenylalanine/histidine ammonia-lyase YP_001500201.1 382112 R 398579 CDS YP_001500202.1 157960168 5660739 complement(383792..384142) 1 NC_009901.1 KEGG: son:SO_3300 cytochrome c; cytochrome c 384142 5660739 Spea_0339 Shewanella pealeana ATCC 700345 cytochrome c YP_001500202.1 383792 R 398579 CDS YP_001500203.1 157960169 5660740 complement(384142..385644) 1 NC_009901.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO_3301 flavocytochrome c flavin subunit; flavocytochrome c 385644 5660740 Spea_0340 Shewanella pealeana ATCC 700345 flavocytochrome c YP_001500203.1 384142 R 398579 CDS YP_001500204.1 157960170 5660741 385905..386753 1 NC_009901.1 PFAM: regulatory protein LysR; KEGG: son:SO_3297 transcriptional regulator, LysR family; LysR family transcriptional regulator 386753 5660741 Spea_0341 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500204.1 385905 D 398579 CDS YP_001500205.1 157960171 5660742 387020..388027 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shw:Sputw3181_0406 transcriptional regulator, LysR family; LysR family transcriptional regulator 388027 5660742 Spea_0342 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500205.1 387020 D 398579 CDS YP_001500206.1 157960172 5660743 complement(388225..389097) 1 NC_009901.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 389097 5660743 Spea_0343 Shewanella pealeana ATCC 700345 DNA-binding transcriptional regulator IlvY YP_001500206.1 388225 R 398579 CDS YP_001500207.1 157960173 5660744 389278..390759 1 NC_009901.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 390759 5660744 Spea_0344 Shewanella pealeana ATCC 700345 ketol-acid reductoisomerase YP_001500207.1 389278 D 398579 CDS YP_001500208.1 157960174 5660745 391294..393003 1 NC_009901.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 393003 5660745 Spea_0345 Shewanella pealeana ATCC 700345 acetolactate synthase 2 catalytic subunit YP_001500208.1 391294 D 398579 CDS YP_001500209.1 157960175 5660746 393081..393347 1 NC_009901.1 KEGG: shw:Sputw3181_3753 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 393347 5660746 Spea_0346 Shewanella pealeana ATCC 700345 amino acid-binding ACT domain-containing protein YP_001500209.1 393081 D 398579 CDS YP_001500210.1 157960176 5660747 393352..394281 1 NC_009901.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 394281 5660747 Spea_0347 Shewanella pealeana ATCC 700345 branched-chain amino acid aminotransferase YP_001500210.1 393352 D 398579 CDS YP_001500211.1 157960177 5660748 394506..396353 1 NC_009901.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 396353 5660748 Spea_0348 Shewanella pealeana ATCC 700345 dihydroxy-acid dehydratase YP_001500211.1 394506 D 398579 CDS YP_001500212.1 157960178 5660749 396382..397932 1 NC_009901.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 397932 5660749 Spea_0349 Shewanella pealeana ATCC 700345 threonine dehydratase YP_001500212.1 396382 D 398579 CDS YP_001500213.1 157960179 5660750 398269..399405 1 NC_009901.1 PFAM: aminotransferase class V; KEGG: son:SO_4343 aminotransferase, class V; serine--pyruvate transaminase 399405 5660750 Spea_0350 Shewanella pealeana ATCC 700345 serine--pyruvate transaminase YP_001500213.1 398269 D 398579 CDS YP_001500214.1 157960180 5660751 complement(399637..401622) 1 NC_009901.1 TIGRFAM: TonB-dependent copper receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sdn:Sden_0470 TonB-dependent copper receptor; TonB-dependent copper receptor 401622 5660751 Spea_0351 Shewanella pealeana ATCC 700345 TonB-dependent copper receptor YP_001500214.1 399637 R 398579 CDS YP_001500215.1 157960181 5660752 complement(401814..403190) 1 NC_009901.1 PFAM: sodium:neurotransmitter symporter; KEGG: slo:Shew_0300 sodium:neurotransmitter symporter; sodium:neurotransmitter symporter 403190 5660752 Spea_0352 Shewanella pealeana ATCC 700345 sodium:neurotransmitter symporter YP_001500215.1 401814 R 398579 CDS YP_001500216.1 157960182 5660753 complement(403619..404107) 1 NC_009901.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: slo:Shew_0301 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 404107 5660753 Spea_0353 Shewanella pealeana ATCC 700345 AsnC family transcriptional regulator YP_001500216.1 403619 R 398579 CDS YP_001500217.1 157960183 5660754 complement(404214..404966) 1 NC_009901.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: shn:Shewana3_0364 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 404966 5660754 Spea_0354 Shewanella pealeana ATCC 700345 PA-phosphatase-like phosphoesterase YP_001500217.1 404214 R 398579 CDS YP_001500218.1 157960184 5660755 405421..406278 1 NC_009901.1 PFAM: protein of unknown function DUF417; KEGG: mmr:Mmar10_2310 protein of unknown function DUF417; hypothetical protein 406278 5660755 Spea_0355 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500218.1 405421 D 398579 CDS YP_001500219.1 157960185 5660756 complement(406354..406608) 1 NC_009901.1 PFAM: protein of unknown function DUF526; KEGG: slo:Shew_0304 protein of unknown function DUF526; hypothetical protein 406608 5660756 Spea_0356 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500219.1 406354 R 398579 CDS YP_001500220.1 157960186 5660757 complement(406800..409892) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: shn:Shewana3_0371 acriflavin resistance protein; acriflavin resistance protein 409892 5660757 Spea_0357 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001500220.1 406800 R 398579 CDS YP_001500221.1 157960187 5660758 complement(409908..411026) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shn:Shewana3_0372 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 411026 5660758 Spea_0358 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001500221.1 409908 R 398579 CDS YP_001500222.1 157960188 5660759 complement(411042..411653) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: son:SO_4326 transcriptional regulator, TetR family; TetR family transcriptional regulator 411653 5660759 Spea_0359 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001500222.1 411042 R 398579 CDS YP_001500223.1 157960189 5660760 411859..413874 1 NC_009901.1 TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: sbm:Shew185_3990 ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep 413874 5660760 Spea_0360 Shewanella pealeana ATCC 700345 ATP-dependent DNA helicase Rep YP_001500223.1 411859 D 398579 CDS YP_001500224.1 157960190 5660761 complement(413908..416529) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: slo:Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase 416529 5660761 Spea_0361 Shewanella pealeana ATCC 700345 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001500224.1 413908 R 398579 CDS YP_001500225.1 157960191 5664673 complement(417531..419450) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: slo:Shew_0307 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 419450 5664673 Spea_0362 Shewanella pealeana ATCC 700345 diguanylate cyclase/phosphodiesterase YP_001500225.1 417531 R 398579 CDS YP_001500226.1 157960192 5660763 complement(419458..420165) 1 NC_009901.1 KEGG: slo:Shew_0308 hypothetical protein; hypothetical protein 420165 5660763 Spea_0363 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500226.1 419458 R 398579 CDS YP_001500227.1 157960193 5660764 complement(420184..420789) 1 NC_009901.1 PFAM: OmpA/MotB domain protein; KEGG: slo:Shew_0309 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 420789 5660764 Spea_0364 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001500227.1 420184 R 398579 CDS YP_001500228.1 157960194 5660765 complement(420786..422213) 1 NC_009901.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: slo:Shew_0310 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 422213 5660765 Spea_0365 Shewanella pealeana ATCC 700345 TolC family type I secretion outer membrane protein YP_001500228.1 420786 R 398579 CDS YP_001500229.1 157960195 5660766 complement(422248..423630) 1 NC_009901.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_0311 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 423630 5660766 Spea_0366 Shewanella pealeana ATCC 700345 HlyD family type I secretion membrane fusion protein YP_001500229.1 422248 R 398579 CDS YP_001500230.1 157960196 5660767 complement(423627..425804) 1 NC_009901.1 PFAM: ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: slo:Shew_0312 ABC transporter-related protein; ABC transporter-like protein 425804 5660767 Spea_0367 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500230.1 423627 R 398579 CDS YP_001500231.1 157960197 5660768 complement(425898..442232) 1 NC_009901.1 PFAM: Hemolysin-type calcium-binding region; von Willebrand factor type A; Cadherin; Na-Ca exchanger/integrin-beta4; KEGG: eca:ECA3266 putative hemagglutinin/hemolysin-related protein; cadherin 442232 5660768 Spea_0368 Shewanella pealeana ATCC 700345 cadherin YP_001500231.1 425898 R 398579 CDS YP_001500232.1 157960198 5660769 complement(442471..448674) 1 NC_009901.1 TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; KEGG: slo:Shew_0314 putative outer membrane adhesin like proteiin; outer membrane adhesin-like protein 448674 5660769 Spea_0369 Shewanella pealeana ATCC 700345 outer membrane adhesin-like protein YP_001500232.1 442471 R 398579 CDS YP_001500233.1 157960199 5660770 complement(448956..450125) 1 NC_009901.1 PFAM: HemY domain protein; KEGG: slo:Shew_0315 HemY domain protein; HemY domain-containing protein 450125 5660770 Spea_0370 Shewanella pealeana ATCC 700345 HemY domain-containing protein YP_001500233.1 448956 R 398579 CDS YP_001500234.1 157960200 5660771 complement(450125..451318) 1 NC_009901.1 PFAM: protein of unknown function DUF513 hemX; KEGG: slo:Shew_0316 protein of unknown function DUF513, HemX; hypothetical protein 451318 5660771 Spea_0371 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500234.1 450125 R 398579 CDS YP_001500235.1 157960201 5660772 complement(451380..452111) 1 NC_009901.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: shw:Sputw3181_3727 uroporphyrinogen III synthase HEM4; uroporphyrinogen III synthase HEM4 452111 5660772 Spea_0372 Shewanella pealeana ATCC 700345 uroporphyrinogen III synthase HEM4 YP_001500235.1 451380 R 398579 CDS YP_001500236.1 157960202 5660773 complement(452118..453050) 1 NC_009901.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 453050 hemC 5660773 hemC Shewanella pealeana ATCC 700345 porphobilinogen deaminase YP_001500236.1 452118 R 398579 CDS YP_001500237.1 157960203 5660774 453249..455672 1 NC_009901.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 455672 cyaA 5660774 cyaA Shewanella pealeana ATCC 700345 adenylate cyclase YP_001500237.1 453249 D 398579 CDS YP_001500238.1 157960204 5660775 complement(455758..456087) 1 NC_009901.1 PFAM: Frataxin family protein; KEGG: sbm:Shew185_3976 frataxin family protein; frataxin family protein 456087 5660775 Spea_0375 Shewanella pealeana ATCC 700345 frataxin family protein YP_001500238.1 455758 R 398579 CDS YP_001500239.1 157960205 5660776 456462..456662 1 NC_009901.1 KEGG: sbl:Sbal_3997 hypothetical protein; hypothetical protein 456662 5660776 Spea_0376 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500239.1 456462 D 398579 CDS YP_001500240.1 157960206 5660777 456668..457912 1 NC_009901.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: slo:Shew_0322 diaminopimelate decarboxylase; diaminopimelate decarboxylase 457912 5660777 Spea_0377 Shewanella pealeana ATCC 700345 diaminopimelate decarboxylase YP_001500240.1 456668 D 398579 CDS YP_001500241.1 157960207 5660778 457970..458806 1 NC_009901.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 458806 dapF 5660778 dapF Shewanella pealeana ATCC 700345 diaminopimelate epimerase YP_001500241.1 457970 D 398579 CDS YP_001500242.1 157960208 5660779 458803..459435 1 NC_009901.1 PFAM: protein of unknown function DUF484; KEGG: slo:Shew_0324 protein of unknown function DUF484; hypothetical protein 459435 5660779 Spea_0379 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500242.1 458803 D 398579 CDS YP_001500243.1 157960209 5660780 459448..460362 1 NC_009901.1 TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sbl:Sbal_3993 tyrosine recombinase XerC; tyrosine recombinase XerC 460362 5660780 Spea_0380 Shewanella pealeana ATCC 700345 tyrosine recombinase XerC YP_001500243.1 459448 D 398579 CDS YP_001500244.1 157960210 5660781 460359..461075 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: she:Shewmr4_0395 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 461075 5660781 Spea_0381 Shewanella pealeana ATCC 700345 HAD family hydrolase YP_001500244.1 460359 D 398579 CDS YP_001500245.1 157960211 5660782 461183..461647 1 NC_009901.1 PFAM: Egg lysin (Sperm-lysin); KEGG: saz:Sama_3237 lipoprotein, putative; hypothetical protein 461647 5660782 Spea_0382 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500245.1 461183 D 398579 CDS YP_001500246.1 157960212 5660783 complement(461706..462428) 1 NC_009901.1 PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: sbm:Shew185_3967 hemerythrin HHE cation binding domain protein; hypothetical protein 462428 5660783 Spea_0383 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500246.1 461706 R 398579 CDS YP_001500247.1 157960213 5660784 462769..463182 1 NC_009901.1 hypothetical protein 463182 5660784 Spea_0384 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500247.1 462769 D 398579 CDS YP_001500248.1 157960214 5660785 463306..464730 1 NC_009901.1 PFAM: outer membrane efflux protein; KEGG: cps:CPS_1957 putative RND efflux system protein; outer membrane efflux protein 464730 5660785 Spea_0385 Shewanella pealeana ATCC 700345 outer membrane efflux protein YP_001500248.1 463306 D 398579 CDS YP_001500249.1 157960215 5660786 464727..465953 1 NC_009901.1 KEGG: cps:CPS_1958 putative RND efflux system protein, MFP subunit; hypothetical protein 465953 5660786 Spea_0386 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500249.1 464727 D 398579 CDS YP_001500250.1 157960216 5660787 465965..469120 1 NC_009901.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: cps:CPS_1959 putative RND efflux system protein; CzcA family heavy metal efflux protein 469120 5660787 Spea_0387 Shewanella pealeana ATCC 700345 CzcA family heavy metal efflux protein YP_001500250.1 465965 D 398579 CDS YP_001500251.1 157960217 5660788 complement(469272..470804) 1 NC_009901.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: shm:Shewmr7_3221 leucyl aminopeptidase; leucyl aminopeptidase 470804 5660788 Spea_0388 Shewanella pealeana ATCC 700345 leucyl aminopeptidase YP_001500251.1 469272 R 398579 CDS YP_001500252.1 157960218 5660789 complement(471188..471493) 1 NC_009901.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 471493 fis 5660789 fis Shewanella pealeana ATCC 700345 DNA-binding protein Fis YP_001500252.1 471188 R 398579 CDS YP_001500253.1 157960219 5660790 complement(471511..472479) 1 NC_009901.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: slo:Shew_0330 putative TIM-barrel protein, nifR3 family; nifR3 family TIM-barrel protein 472479 5660790 Spea_0390 Shewanella pealeana ATCC 700345 nifR3 family TIM-barrel protein YP_001500253.1 471511 R 398579 CDS YP_001500254.1 157960220 5660791 complement(472631..473512) 1 NC_009901.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 473512 prmA 5660791 prmA Shewanella pealeana ATCC 700345 50S ribosomal protein L11 methyltransferase YP_001500254.1 472631 R 398579 CDS YP_001500255.1 157960221 5660792 473880..474584 1 NC_009901.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 474584 5660792 Spea_0392 Shewanella pealeana ATCC 700345 fumarate reductase cytochrome b-556 subunit YP_001500255.1 473880 D 398579 CDS YP_001500256.1 157960222 5660793 474746..475420 1 NC_009901.1 PFAM: fumarate reductase respiratory complex transmembrane subunit; KEGG: sbl:Sbal_3936 fumarate reductase respiratory complex, transmembrane subunit; fumarate reductase respiratory complex transmembrane subunit 475420 5660793 Spea_0393 Shewanella pealeana ATCC 700345 fumarate reductase respiratory complex transmembrane subunit YP_001500256.1 474746 D 398579 CDS YP_001500257.1 157960223 5660794 475477..477477 1 NC_009901.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 477477 5660794 Spea_0394 Shewanella pealeana ATCC 700345 fumarate reductase flavoprotein subunit YP_001500257.1 475477 D 398579 CDS YP_001500258.1 157960224 5660795 477474..478217 1 NC_009901.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 478217 frdB 5660795 frdB Shewanella pealeana ATCC 700345 fumarate reductase iron-sulfur subunit YP_001500258.1 477474 D 398579 CDS YP_001500259.1 157960225 5660796 478350..479264 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_0336 transcriptional regulator, LysR family; LysR family transcriptional regulator 479264 5660796 Spea_0396 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500259.1 478350 D 398579 CDS YP_001500260.1 157960226 5660797 complement(479324..480589) 1 NC_009901.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 480589 rho 5660797 rho Shewanella pealeana ATCC 700345 transcription termination factor Rho YP_001500260.1 479324 R 398579 CDS YP_001500261.1 157960227 5660798 complement(480827..481153) 1 NC_009901.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO_0406 thioredoxin 1; thioredoxin 481153 5660798 Spea_0398 Shewanella pealeana ATCC 700345 thioredoxin YP_001500261.1 480827 R 398579 CDS YP_001500262.1 157960228 5660799 481557..482867 1 NC_009901.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 482867 5660799 Spea_0399 Shewanella pealeana ATCC 700345 ATP-dependent RNA helicase RhlB YP_001500262.1 481557 D 398579 CDS YP_001500263.1 157960229 5660800 482881..483792 1 NC_009901.1 PFAM: Ppx/GppA phosphatase; KEGG: slo:Shew_0340 Ppx/GppA phosphatase; Ppx/GppA phosphatase 483792 5660800 Spea_0400 Shewanella pealeana ATCC 700345 Ppx/GppA phosphatase YP_001500263.1 482881 D 398579 CDS YP_001500264.1 157960230 5660801 484439..487420 1 NC_009901.1 PFAM: TonB-dependent receptor; Cna B domain protein; TonB-dependent receptor plug; KEGG: saz:Sama_3213 putative oar protein; TonB-dependent receptor 487420 5660801 Spea_0401 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500264.1 484439 D 398579 CDS YP_001500265.1 157960231 5660802 487518..487916 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 487916 5660802 Spea_0402 Shewanella pealeana ATCC 700345 transposase YP_001500265.1 487518 D 398579 CDS YP_001500266.1 157960232 5660803 488000..488752 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 488752 5660803 Spea_0403 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001500266.1 488000 D 398579 CDS YP_001500267.1 157960233 5660804 489235..491925 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_0341 TonB-dependent receptor; TonB-dependent receptor 491925 5660804 Spea_0404 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500267.1 489235 D 398579 CDS YP_001500268.1 157960234 5660805 complement(492003..492536) 1 NC_009901.1 KEGG: slo:Shew_0342 hypothetical protein; hypothetical protein 492536 5660805 Spea_0405 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500268.1 492003 R 398579 CDS YP_001500269.1 157960235 5664676 complement(499518..500534) 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 500534 5664676 Spea_0406 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001500269.1 499518 R 398579 CDS YP_001500270.1 157960236 5660807 complement(500954..501343) 1 NC_009901.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: slo:Shew_3444 mutator MutT protein; mutator MutT protein 501343 5660807 Spea_0407 Shewanella pealeana ATCC 700345 mutator MutT protein YP_001500270.1 500954 R 398579 CDS YP_001500271.1 157960237 5660808 complement(501340..501579) 1 NC_009901.1 PFAM: protein of unknown function DUF329; KEGG: slo:Shew_3443 protein of unknown function DUF329; hypothetical protein 501579 5660808 Spea_0408 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500271.1 501340 R 398579 CDS YP_001500272.1 157960238 5660809 complement(501639..502373) 1 NC_009901.1 PFAM: protein of unknown function DUF1342; KEGG: slo:Shew_3442 protein of unknown function DUF1342; hypothetical protein 502373 5660809 Spea_0409 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500272.1 501639 R 398579 CDS YP_001500273.1 157960239 5660810 complement(502382..502987) 1 NC_009901.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 502987 coaE 5660810 coaE Shewanella pealeana ATCC 700345 dephospho-CoA kinase YP_001500273.1 502382 R 398579 CDS YP_001500274.1 157960240 5660811 complement(503007..503918) 1 NC_009901.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: sbm:Shew185_3944 prepilin peptidase; prepilin peptidase 503918 5660811 Spea_0411 Shewanella pealeana ATCC 700345 prepilin peptidase YP_001500274.1 503007 R 398579 CDS YP_001500275.1 157960241 5660812 complement(503951..505219) 1 NC_009901.1 PFAM: type II secretion system protein; KEGG: shn:Shewana3_0418 type II secretion system protein; type II secretion system protein 505219 5660812 Spea_0412 Shewanella pealeana ATCC 700345 type II secretion system protein YP_001500275.1 503951 R 398579 CDS YP_001500276.1 157960242 5660813 complement(505266..506972) 1 NC_009901.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: slo:Shew_3438 type IV-A pilus assembly ATPase PilB; type IV-A pilus assembly ATPase PilB 506972 5660813 Spea_0413 Shewanella pealeana ATCC 700345 type IV-A pilus assembly ATPase PilB YP_001500276.1 505266 R 398579 CDS YP_001500277.1 157960243 5660814 complement(507007..507453) 1 NC_009901.1 KEGG: sbl:Sbal_3918 methylation site containing protein; methylation site containing protein 507453 5660814 Spea_0414 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001500277.1 507007 R 398579 CDS YP_001500278.1 157960244 5660815 complement(508211..509095) 1 NC_009901.1 KEGG: shn:Shewana3_0422 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 509095 5660815 Spea_0415 Shewanella pealeana ATCC 700345 nicotinate-nucleotide pyrophosphorylase YP_001500278.1 508211 R 398579 CDS YP_001500279.1 157960245 5660816 509338..509880 1 NC_009901.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: slo:Shew_3434 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; N-acetyl-anhydromuranmyl-L-alanine amidase 509880 5660816 Spea_0416 Shewanella pealeana ATCC 700345 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001500279.1 509338 D 398579 CDS YP_001500280.1 157960246 5660817 509947..510795 1 NC_009901.1 involved in regulation of beta-lactamase; putative signaling protein; regulatory protein AmpE 510795 5660817 Spea_0417 Shewanella pealeana ATCC 700345 regulatory protein AmpE YP_001500280.1 509947 D 398579 CDS YP_001500281.1 157960247 5660818 511158..511910 1 NC_009901.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 511910 pdhR 5660818 pdhR Shewanella pealeana ATCC 700345 transcriptional regulator PdhR YP_001500281.1 511158 D 398579 CDS YP_001500282.1 157960248 5660819 512019..514679 1 NC_009901.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 514679 aceE 5660819 aceE Shewanella pealeana ATCC 700345 pyruvate dehydrogenase subunit E1 YP_001500282.1 512019 D 398579 CDS YP_001500283.1 157960249 5660820 514693..516555 1 NC_009901.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 516555 aceF 5660820 aceF Shewanella pealeana ATCC 700345 dihydrolipoamide acetyltransferase YP_001500283.1 514693 D 398579 CDS YP_001500284.1 157960250 5660821 516799..518226 1 NC_009901.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 518226 5660821 Spea_0421 Shewanella pealeana ATCC 700345 dihydrolipoamide dehydrogenase YP_001500284.1 516799 D 398579 CDS YP_001500285.1 157960251 5660822 518372..522850 1 NC_009901.1 KEGG: slo:Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 522850 5660822 Spea_0422 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001500285.1 518372 D 398579 CDS YP_001500286.1 157960252 5660823 522943..525159 1 NC_009901.1 PFAM: Patatin; surface antigen variable number repeat protein; KEGG: sbl:Sbal_3909 patatin; patatin 525159 5660823 Spea_0423 Shewanella pealeana ATCC 700345 patatin YP_001500286.1 522943 D 398579 CDS YP_001500287.1 157960253 5660824 complement(525248..525916) 1 NC_009901.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 525916 5660824 Spea_0424 Shewanella pealeana ATCC 700345 2-deoxyglucose-6-phosphatase YP_001500287.1 525248 R 398579 CDS YP_001500288.1 157960254 5660825 526341..528938 1 NC_009901.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 528938 5660825 Spea_0425 Shewanella pealeana ATCC 700345 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001500288.1 526341 D 398579 CDS YP_001500289.1 157960255 5660826 complement(529135..529602) 1 NC_009901.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 529602 5660826 Spea_0426 Shewanella pealeana ATCC 700345 anti-RNA polymerase sigma 70 factor YP_001500289.1 529135 R 398579 CDS YP_001500290.1 157960256 5660827 530134..531198 1 NC_009901.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 531198 hemE 5660827 hemE Shewanella pealeana ATCC 700345 uroporphyrinogen decarboxylase YP_001500290.1 530134 D 398579 CDS YP_001500291.1 157960257 5660828 531806..534379 1 NC_009901.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: shn:Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 534379 5660828 Spea_0428 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001500291.1 531806 D 398579 CDS YP_001500292.1 157960258 5660829 534487..535290 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: shm:Shewmr7_3588 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 535290 5660829 Spea_0429 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001500292.1 534487 D 398579 CDS YP_001500293.1 157960259 5660830 complement(535323..535541) 1 NC_009901.1 KEGG: shn:Shewana3_0438 hypothetical protein; hypothetical protein 535541 5660830 Spea_0430 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500293.1 535323 R 398579 CDS YP_001500294.1 157960260 5660831 complement(536172..537473) 1 NC_009901.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 537473 5660831 Spea_0431 Shewanella pealeana ATCC 700345 phosphoribosylamine--glycine ligase YP_001500294.1 536172 R 398579 CDS YP_001500295.1 157960261 5660832 complement(537651..539240) 1 NC_009901.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 539240 purH 5660832 purH Shewanella pealeana ATCC 700345 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001500295.1 537651 R 398579 CDS YP_001500296.1 157960262 5660833 539597..540118 1 NC_009901.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator 540118 zntR 5660833 zntR Shewanella pealeana ATCC 700345 zinc-responsive transcriptional regulator YP_001500296.1 539597 D 398579 CDS YP_001500297.1 157960263 5660834 540140..541525 1 NC_009901.1 PFAM: permease; KEGG: slo:Shew_3410 permease; permease 541525 5660834 Spea_0434 Shewanella pealeana ATCC 700345 permease YP_001500297.1 540140 D 398579 CDS YP_001500298.1 157960264 5660835 541687..542343 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: maq:Maqu_3568 DsbA oxidoreductase; DSBA oxidoreductase 542343 5660835 Spea_0435 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001500298.1 541687 D 398579 CDS YP_001500299.1 157960265 5660836 542356..542751 1 NC_009901.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: gfo:GFO_1625 protein containing DUF393; putative thiol-disulfide oxidoreductase DCC 542751 5660836 Spea_0436 Shewanella pealeana ATCC 700345 putative thiol-disulfide oxidoreductase DCC YP_001500299.1 542356 D 398579 CDS YP_001500300.1 157960266 5660837 543585..544166 1 NC_009901.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: sbm:Shew185_0099 molybdopterin oxidoreductase Fe4s4 region; molybdopterin oxidoreductase Fe4S4 region 544166 5660837 Spea_0437 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase Fe4S4 region YP_001500300.1 543585 D 398579 CDS YP_001500301.1 157960267 5660838 544215..546605 1 NC_009901.1 KEGG: sbm:Shew185_0099 molybdopterin oxidoreductase Fe4s4 region; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 546605 5660838 Spea_0438 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit alpha YP_001500301.1 544215 D 398579 CDS YP_001500302.1 157960268 5660839 546608..547510 1 NC_009901.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: sbm:Shew185_0101 formate dehydrogenase, beta subunit; formate dehydrogenase subunit beta 547510 5660839 Spea_0439 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit beta YP_001500302.1 546608 D 398579 CDS YP_001500303.1 157960269 5660840 547516..548160 1 NC_009901.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: she:Shewmr4_0104 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 548160 5660840 Spea_0440 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit gamma YP_001500303.1 547516 D 398579 CDS YP_001500304.1 157960270 5660841 548163..549134 1 NC_009901.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: son:SO_0104 fdhE protein; formate dehydrogenase accessory protein FdhE 549134 5660841 Spea_0441 Shewanella pealeana ATCC 700345 formate dehydrogenase accessory protein FdhE YP_001500304.1 548163 D 398579 CDS YP_001500305.1 157960271 5660842 549258..550748 1 NC_009901.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 550748 5660842 Spea_0442 Shewanella pealeana ATCC 700345 selenocysteine synthase YP_001500305.1 549258 D 398579 CDS YP_001500306.1 157960272 5660843 550745..552652 1 NC_009901.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: shn:Shewana3_0107 selenocysteine-specific translation elongation factor; selenocysteine-specific translation elongation factor 552652 5660843 Spea_0443 Shewanella pealeana ATCC 700345 selenocysteine-specific translation elongation factor YP_001500306.1 550745 D 398579 CDS YP_001500307.1 157960273 5664677 553011..553874 1 NC_009901.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 553874 5664677 Spea_0444 Shewanella pealeana ATCC 700345 formate dehydrogenase accessory protein YP_001500307.1 553011 D 398579 CDS YP_001500308.1 157960274 5660845 553920..555191 1 NC_009901.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: shn:Shewana3_0109 protein of unknown function DUF395, YeeE/YedE; putative inner membrane protein 555191 5660845 Spea_0445 Shewanella pealeana ATCC 700345 putative inner membrane protein YP_001500308.1 553920 D 398579 CDS YP_001500309.1 157960275 5660846 555278..555514 1 NC_009901.1 PFAM: SirA family protein; KEGG: cko:CKO_01008 hypothetical protein; hypothetical protein 555514 5660846 Spea_0446 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500309.1 555278 D 398579 CDS YP_001500310.1 157960276 5660847 complement(555907..556635) 1 NC_009901.1 PFAM: protein of unknown function DUF28; KEGG: sbm:Shew185_1289 protein of unknown function DUF28; hypothetical protein 556635 5660847 Spea_0447 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500310.1 555907 R 398579 CDS YP_001500311.1 157960277 5660848 complement(556787..557707) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vha:VIBHAR_01722 hypothetical protein; LysR family transcriptional regulator 557707 5660848 Spea_0448 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500311.1 556787 R 398579 CDS YP_001500312.1 157960278 5660849 557869..558234 1 NC_009901.1 KEGG: vha:VIBHAR_05268 hypothetical protein; hypothetical protein 558234 5660849 Spea_0449 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500312.1 557869 D 398579 CDS YP_001500313.1 157960279 5660850 558677..560740 1 NC_009901.1 KEGG: slo:Shew_2580 hypothetical protein; hypothetical protein 560740 5660850 Spea_0450 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500313.1 558677 D 398579 CDS YP_001500314.1 157960280 5660851 561005..561463 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_3397 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 561463 5660851 Spea_0451 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500314.1 561005 D 398579 CDS YP_001500315.1 157960281 5660852 complement(561549..561794) 1 NC_009901.1 KEGG: slo:Shew_3396 hypothetical protein; hypothetical protein 561794 5660852 Spea_0452 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500315.1 561549 R 398579 CDS YP_001500316.1 157960282 5660853 561972..562856 1 NC_009901.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: shm:Shewmr7_3501 radical SAM domain protein; radical SAM domain-containing protein 562856 5660853 Spea_0453 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001500316.1 561972 D 398579 CDS YP_001500317.1 157960283 5660854 complement(562872..563810) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0144 probable transcription regulator protein; LysR family transcriptional regulator 563810 5660854 Spea_0454 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500317.1 562872 R 398579 CDS YP_001500318.1 157960284 5660855 complement(563807..564739) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppu:PP_3608 transcriptional regulator, LysR family; LysR family transcriptional regulator 564739 5660855 Spea_0455 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500318.1 563807 R 398579 CDS YP_001500319.1 157960285 5660856 complement(565038..566078) 1 NC_009901.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: slo:Shew_1090 OmpA/MotB domain protein; OmpA domain-containing protein 566078 5660856 Spea_0456 Shewanella pealeana ATCC 700345 OmpA domain-containing protein YP_001500319.1 565038 R 398579 CDS YP_001500320.1 157960286 5660857 complement(566318..567154) 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: slo:Shew_3394 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 567154 5660857 Spea_0457 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001500320.1 566318 R 398579 CDS YP_001500321.1 157960287 5660858 567367..567825 1 NC_009901.1 KEGG: shw:Sputw3181_3632 hypothetical protein; hypothetical protein 567825 5660858 Spea_0458 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500321.1 567367 D 398579 CDS YP_001500322.1 157960288 5660859 complement(567896..568111) 1 NC_009901.1 KEGG: sbm:Shew185_0466 protein of unknown function DUF465; hypothetical protein 568111 5660859 Spea_0459 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500322.1 567896 R 398579 CDS YP_001500323.1 157960289 5660860 568608..569366 1 NC_009901.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 569366 5660860 Spea_0460 Shewanella pealeana ATCC 700345 uridine phosphorylase YP_001500323.1 568608 D 398579 CDS YP_001500324.1 157960290 5660861 complement(569440..570192) 1 NC_009901.1 KEGG: slo:Shew_3389 hypothetical protein; hypothetical protein 570192 5660861 Spea_0461 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500324.1 569440 R 398579 CDS YP_001500325.1 157960291 5660862 570582..571061 1 NC_009901.1 PFAM: protein of unknown function DUF107; KEGG: shm:Shewmr7_0449 protein of unknown function DUF107; hypothetical protein 571061 5660862 Spea_0462 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500325.1 570582 D 398579 CDS YP_001500326.1 157960292 5660863 571090..572019 1 NC_009901.1 PFAM: band 7 protein; KEGG: slo:Shew_3387 band 7 protein; hypothetical protein 572019 5660863 Spea_0463 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500326.1 571090 D 398579 CDS YP_001500327.1 157960293 5660864 572019..572957 1 NC_009901.1 PFAM: band 7 protein; KEGG: slo:Shew_3386 band 7 protein; hypothetical protein 572957 5660864 Spea_0464 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500327.1 572019 D 398579 CDS YP_001500328.1 157960294 5660865 573068..573481 1 NC_009901.1 PFAM: NUDIX hydrolase; KEGG: shn:Shewana3_0463 NUDIX hydrolase; NUDIX hydrolase 573481 5660865 Spea_0465 Shewanella pealeana ATCC 700345 NUDIX hydrolase YP_001500328.1 573068 D 398579 CDS YP_001500329.1 157960295 5660866 complement(573816..575906) 1 NC_009901.1 KEGG: cps:CPS_1933 sensory box/GGDEF/EAL domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 575906 5660866 Spea_0466 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001500329.1 573816 R 398579 CDS YP_001500330.1 157960296 5660867 576330..576683 1 NC_009901.1 PFAM: Endoribonuclease L-PSP; KEGG: cps:CPS_4240 endoribonuclease, L-PSP family; endoribonuclease L-PSP 576683 5660867 Spea_0467 Shewanella pealeana ATCC 700345 endoribonuclease L-PSP YP_001500330.1 576330 D 398579 CDS YP_001500331.1 157960297 5660868 576841..579006 1 NC_009901.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 579006 uvrD 5660868 uvrD Shewanella pealeana ATCC 700345 DNA-dependent helicase II YP_001500331.1 576841 D 398579 CDS YP_001500332.1 157960298 5660869 579168..580034 1 NC_009901.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 580034 ubiA 5660869 ubiA Shewanella pealeana ATCC 700345 4-hydroxybenzoate octaprenyltransferase YP_001500332.1 579168 D 398579 CDS YP_001500333.1 157960299 5660870 580298..580828 1 NC_009901.1 KEGG: slo:Shew_3383 hypothetical protein; hypothetical protein 580828 5660870 Spea_0470 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500333.1 580298 D 398579 CDS YP_001500334.1 157960300 5660871 complement(580895..581914) 1 NC_009901.1 PFAM: putative esterase; KEGG: sfr:Sfri_3395 hydrolase of the alpha/beta superfamily; putative esterase 581914 5660871 Spea_0471 Shewanella pealeana ATCC 700345 putative esterase YP_001500334.1 580895 R 398579 CDS YP_001500335.1 157960301 5660872 582132..583238 1 NC_009901.1 KEGG: sfr:Sfri_3394 hypothetical protein; hypothetical protein 583238 5660872 Spea_0472 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500335.1 582132 D 398579 CDS YP_001500336.1 157960302 5660873 complement(583314..583892) 1 NC_009901.1 KEGG: slo:Shew_0343 hypothetical protein; hypothetical protein 583892 5660873 Spea_0473 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500336.1 583314 R 398579 CDS YP_001500337.1 157960303 5660874 complement(584044..584259) 1 NC_009901.1 hypothetical protein 584259 5660874 Spea_0474 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500337.1 584044 R 398579 CDS YP_001500338.1 157960304 5660875 584666..586195 1 NC_009901.1 PFAM: Na+/H+ antiporter NhaC; KEGG: slo:Shew_0344 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 586195 5660875 Spea_0475 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001500338.1 584666 D 398579 CDS YP_001500339.1 157960305 5660876 complement(586492..587025) 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: slo:Shew_0345 redoxin domain protein; alkyl hydroperoxide reductase 587025 5660876 Spea_0476 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001500339.1 586492 R 398579 CDS YP_001500340.1 157960306 5660877 complement(587069..587515) 1 NC_009901.1 PFAM: cytochrome C biogenesis protein; KEGG: shw:Sputw3181_0575 cytochrome c biogenesis protein; cytochrome C biogenesis protein 587515 5660877 Spea_0477 Shewanella pealeana ATCC 700345 cytochrome C biogenesis protein YP_001500340.1 587069 R 398579 CDS YP_001500341.1 157960307 5660878 complement(587512..589494) 1 NC_009901.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO_0478 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 589494 5660878 Spea_0478 Shewanella pealeana ATCC 700345 cytochrome c-type biogenesis protein CcmF YP_001500341.1 587512 R 398579 CDS YP_001500342.1 157960308 5660879 590051..592087 1 NC_009901.1 KEGG: slo:Shew_0348 cytochrome c, putative; cytochrome c 592087 5660879 Spea_0479 Shewanella pealeana ATCC 700345 cytochrome c YP_001500342.1 590051 D 398579 CDS YP_001500343.1 157960309 5660880 592148..592576 1 NC_009901.1 SMART: Rhodanese domain protein; KEGG: shw:Sputw3181_0578 rhodanese domain protein; rhodanese domain-containing protein 592576 5660880 Spea_0480 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001500343.1 592148 D 398579 CDS YP_001500344.1 157960310 5660881 592614..593417 1 NC_009901.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_0350 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 593417 5660881 Spea_0481 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001500344.1 592614 D 398579 CDS YP_001500345.1 157960311 5660882 593449..594186 1 NC_009901.1 KEGG: son:SO_0482 formate-dependent nitrite reductase, NrfG protein; hypothetical protein 594186 5660882 Spea_0482 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500345.1 593449 D 398579 CDS YP_001500346.1 157960312 5660883 594264..594971 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: she:Shewmr4_0492 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 594971 5660883 Spea_0483 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001500346.1 594264 D 398579 CDS YP_001500347.1 157960313 5660884 594974..595921 1 NC_009901.1 PFAM: Polysulphide reductase NrfD; KEGG: slo:Shew_0353 polysulphide reductase, NrfD; polysulfide reductase NrfD 595921 5660884 Spea_0484 Shewanella pealeana ATCC 700345 polysulfide reductase NrfD YP_001500347.1 594974 D 398579 CDS YP_001500348.1 157960314 5660885 596272..596760 1 NC_009901.1 PFAM: NosL family protein; KEGG: shm:Shewmr7_3536 NosL family protein; NosL family protein 596760 5660885 Spea_0485 Shewanella pealeana ATCC 700345 NosL family protein YP_001500348.1 596272 D 398579 CDS YP_001500349.1 157960315 5660886 596830..598170 1 NC_009901.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: shw:Sputw3181_0582 periplasmic copper-binding; periplasmic copper-binding protein 598170 5660886 Spea_0486 Shewanella pealeana ATCC 700345 periplasmic copper-binding protein YP_001500349.1 596830 D 398579 CDS YP_001500350.1 157960316 5660887 598170..599147 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_0356 ABC transporter-related protein; ABC transporter-like protein 599147 5660887 Spea_0487 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500350.1 598170 D 398579 CDS YP_001500351.1 157960317 5660888 599149..599994 1 NC_009901.1 KEGG: slo:Shew_0357 copper ABC transporter, permease protein; copper ABC transporter permease 599994 5660888 Spea_0488 Shewanella pealeana ATCC 700345 copper ABC transporter permease YP_001500351.1 599149 D 398579 CDS YP_001500352.1 157960318 5660889 600202..601485 1 NC_009901.1 PFAM: transcriptional regulator domain protein; KEGG: shm:Shewmr7_3532 transcriptional regulator, CadC; transcriptional regulator CadC 601485 5660889 Spea_0489 Shewanella pealeana ATCC 700345 transcriptional regulator CadC YP_001500352.1 600202 D 398579 CDS YP_001500353.1 157960319 5660890 complement(602626..603084) 1 NC_009901.1 hypothetical protein 603084 5660890 Spea_0490 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500353.1 602626 R 398579 CDS YP_001500354.1 157960320 5660891 complement(603137..603382) 1 NC_009901.1 KEGG: ppr:PBPRC0048 hypothetical protein; hypothetical protein 603382 5660891 Spea_0491 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500354.1 603137 R 398579 CDS YP_001500355.1 157960321 5660892 603830..604135 1 NC_009901.1 KEGG: sdn:Sden_3087 protein of unknown function DUF1568; hypothetical protein 604135 5660892 Spea_0492 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500355.1 603830 D 398579 CDS YP_001500356.1 157960322 5660893 complement(604262..604921) 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: cps:CPS_3142 transporter, LysE family; lysine exporter protein LysE/YggA 604921 5660893 Spea_0493 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001500356.1 604262 R 398579 CDS YP_001500357.1 157960323 5660894 605426..605563 1 NC_009901.1 KEGG: sdn:Sden_1610 protein of unknown function DUF1568; hypothetical protein 605563 5660894 Spea_0494 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500357.1 605426 D 398579 CDS YP_001500358.1 157960324 5660895 605743..605913 1 NC_009901.1 KEGG: son:SO_1241 hypothetical protein; hypothetical protein 605913 5660895 Spea_0495 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500358.1 605743 D 398579 CDS YP_001500359.1 157960325 5660896 606457..607014 1 NC_009901.1 KEGG: vfi:VFA0138 hypothetical protein; hypothetical protein 607014 5660896 Spea_0496 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500359.1 606457 D 398579 CDS YP_001500360.1 157960326 5660897 607120..608490 1 NC_009901.1 PFAM: FNIP; KEGG: tva:TVAG_154640 surface antigen BspA-like Pfam: FNIP Pentapeptide_2 PROSITE: SER_RICH; hypothetical protein 608490 5660897 Spea_0497 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500360.1 607120 D 398579 CDS YP_001500361.1 157960327 5660898 608893..611712 1 NC_009901.1 hypothetical protein 611712 5660898 Spea_0498 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500361.1 608893 D 398579 CDS YP_001500362.1 157960328 5660899 612325..613329 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcz:pE33L466_0259 possible drug/metabolite exporter; hypothetical protein 613329 5660899 Spea_0499 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500362.1 612325 D 398579 CDS YP_001500363.1 157960329 5660900 614099..614428 1 NC_009901.1 PFAM: ferredoxin; KEGG: ppr:PBPRB0250 hypothetical protein; ferredoxin 614428 5660900 Spea_0500 Shewanella pealeana ATCC 700345 ferredoxin YP_001500363.1 614099 D 398579 CDS YP_001500364.1 157960330 5660901 614605..615147 1 NC_009901.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigZ 615147 5660901 Spea_0501 Shewanella pealeana ATCC 700345 RNA polymerase sigma factor SigZ YP_001500364.1 614605 D 398579 CDS YP_001500365.1 157960331 5660902 615214..615927 1 NC_009901.1 PFAM: Glutathione S-transferase domain; KEGG: ppr:PBPRB0252 putative glutathione S-transferase; glutathione S-transferase domain-containing protein 615927 5660902 Spea_0502 Shewanella pealeana ATCC 700345 glutathione S-transferase domain-containing protein YP_001500365.1 615214 D 398579 CDS YP_001500366.1 157960332 5660903 616645..618675 1 NC_009901.1 KEGG: slo:Shew_0348 cytochrome c, putative; cytochrome c 618675 5660903 Spea_0503 Shewanella pealeana ATCC 700345 cytochrome c YP_001500366.1 616645 D 398579 CDS YP_001500367.1 157960333 5660904 618715..619173 1 NC_009901.1 SMART: Rhodanese domain protein; KEGG: slo:Shew_0349 rhodanese domain protein; rhodanese domain-containing protein 619173 5660904 Spea_0504 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001500367.1 618715 D 398579 CDS YP_001500368.1 157960334 5660905 619233..620018 1 NC_009901.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_0350 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 620018 5660905 Spea_0505 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001500368.1 619233 D 398579 CDS YP_001500369.1 157960335 5660906 620104..620817 1 NC_009901.1 KEGG: slo:Shew_0351 tetratricopeptide TPR_2 repeat protein; hypothetical protein 620817 5660906 Spea_0506 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500369.1 620104 D 398579 CDS YP_001500370.1 157960336 5660907 620880..621590 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: she:Shewmr4_0492 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 621590 5660907 Spea_0507 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001500370.1 620880 D 398579 CDS YP_001500371.1 157960337 5660908 621593..622540 1 NC_009901.1 PFAM: Polysulphide reductase NrfD; KEGG: slo:Shew_0353 polysulphide reductase, NrfD; polysulfide reductase NrfD 622540 5660908 Spea_0508 Shewanella pealeana ATCC 700345 polysulfide reductase NrfD YP_001500371.1 621593 D 398579 CDS YP_001500372.1 157960338 5660909 622713..623201 1 NC_009901.1 PFAM: NosL family protein; KEGG: sbm:Shew185_3871 NosL family protein; NosL family protein 623201 5660909 Spea_0509 Shewanella pealeana ATCC 700345 NosL family protein YP_001500372.1 622713 D 398579 CDS YP_001500373.1 157960339 5660910 623257..624576 1 NC_009901.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: shw:Sputw3181_0582 periplasmic copper-binding; periplasmic copper-binding protein 624576 5660910 Spea_0510 Shewanella pealeana ATCC 700345 periplasmic copper-binding protein YP_001500373.1 623257 D 398579 CDS YP_001500374.1 157960340 5660911 624672..625580 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_0356 ABC transporter-related protein; ABC transporter-like protein 625580 5660911 Spea_0511 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500374.1 624672 D 398579 CDS YP_001500375.1 157960341 5660912 625582..626406 1 NC_009901.1 PFAM: ABC-2 type transporter; KEGG: slo:Shew_0357 copper ABC transporter, permease protein; ABC-2 type transporter 626406 5660912 Spea_0512 Shewanella pealeana ATCC 700345 ABC-2 type transporter YP_001500375.1 625582 D 398579 CDS YP_001500376.1 157960342 5660913 626672..627955 1 NC_009901.1 PFAM: transcriptional regulator domain protein; KEGG: shn:Shewana3_0499 transcriptional regulator, CadC; transcriptional regulator CadC 627955 5660913 Spea_0513 Shewanella pealeana ATCC 700345 transcriptional regulator CadC YP_001500376.1 626672 D 398579 CDS YP_001500377.1 157960343 5660914 628444..628863 1 NC_009901.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 628863 5660914 Spea_0514 Shewanella pealeana ATCC 700345 D-ribose pyranase YP_001500377.1 628444 D 398579 CDS YP_001500378.1 157960344 5660915 628882..630387 1 NC_009901.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 630387 5660915 Spea_0515 Shewanella pealeana ATCC 700345 D-ribose transporter ATP-binding protein YP_001500378.1 628882 D 398579 CDS YP_001500379.1 157960345 5660916 630384..631358 1 NC_009901.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 631358 rbsC 5660916 rbsC Shewanella pealeana ATCC 700345 ribose ABC transporter permease YP_001500379.1 630384 D 398579 CDS YP_001500380.1 157960346 5660917 631445..632344 1 NC_009901.1 periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 632344 5660917 Spea_0517 Shewanella pealeana ATCC 700345 D-ribose transporter subunit RbsB YP_001500380.1 631445 D 398579 CDS YP_001500381.1 157960347 5660918 632466..633389 1 NC_009901.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 633389 5660918 Spea_0518 Shewanella pealeana ATCC 700345 ribokinase YP_001500381.1 632466 D 398579 CDS YP_001500382.1 157960348 5660919 633517..634521 1 NC_009901.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vco:VC0395_0006 ribose operon repressor; LacI family transcriptional regulator 634521 5660919 Spea_0519 Shewanella pealeana ATCC 700345 LacI family transcriptional regulator YP_001500382.1 633517 D 398579 CDS YP_001500383.1 157960349 5660920 complement(634615..635325) 1 NC_009901.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 635325 fre 5660920 fre Shewanella pealeana ATCC 700345 FMN reductase YP_001500383.1 634615 R 398579 CDS YP_001500384.1 157960350 5660921 complement(635435..636916) 1 NC_009901.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: slo:Shew_0360 UbiD family decarboxylase; UbiD family decarboxylase 636916 5660921 Spea_0521 Shewanella pealeana ATCC 700345 UbiD family decarboxylase YP_001500384.1 635435 R 398579 CDS YP_001500385.1 157960351 5660922 637137..637706 1 NC_009901.1 KEGG: sfr:Sfri_3388 hypothetical protein; hypothetical protein 637706 5660922 Spea_0522 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500385.1 637137 D 398579 CDS YP_001500386.1 157960352 5660923 637794..638384 1 NC_009901.1 KEGG: saz:Sama_3100 hypothetical protein; hypothetical protein 638384 5660923 Spea_0523 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500386.1 637794 D 398579 CDS YP_001500387.1 157960353 5660924 complement(638457..638981) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sfr:Sfri_3606 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 638981 5660924 Spea_0524 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500387.1 638457 R 398579 CDS YP_001500388.1 157960354 5660925 complement(639013..639576) 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: cps:CPS_2140 putative lipoprotein; redoxin domain-containing protein 639576 5660925 Spea_0525 Shewanella pealeana ATCC 700345 redoxin domain-containing protein YP_001500388.1 639013 R 398579 CDS YP_001500389.1 157960355 5660926 640018..641220 1 NC_009901.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: ppr:PBPRA2465 putative tyrosine-specific transport protein; aromatic amino acid transporter 641220 5660926 Spea_0526 Shewanella pealeana ATCC 700345 aromatic amino acid transporter YP_001500389.1 640018 D 398579 CDS YP_001500390.1 157960356 5664679 643519..644862 1 NC_009901.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 644862 5664679 Spea_0527 Shewanella pealeana ATCC 700345 glutamate dehydrogenase YP_001500390.1 643519 D 398579 CDS YP_001500391.1 157960357 5664684 651937..653757 1 NC_009901.1 KEGG: gur:Gura_0621 hypothetical protein; hypothetical protein 653757 5664684 Spea_0528 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500391.1 651937 D 398579 CDS YP_001500392.1 157960358 5660929 complement(653848..655044) 1 NC_009901.1 KEGG: spc:Sputcn32_0051 putative plasmid transfer protein; putative plasmid transfer protein 655044 5660929 Spea_0529 Shewanella pealeana ATCC 700345 putative plasmid transfer protein YP_001500392.1 653848 R 398579 CDS YP_001500393.1 157960359 5660930 655536..656162 1 NC_009901.1 KEGG: sfr:Sfri_3568 hypothetical protein; hypothetical protein 656162 5660930 Spea_0530 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500393.1 655536 D 398579 CDS YP_001500394.1 157960360 5660931 complement(656197..656550) 1 NC_009901.1 hypothetical protein 656550 5660931 Spea_0531 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500394.1 656197 R 398579 CDS YP_001500395.1 157960361 5660932 complement(656680..657342) 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbl:Sbal_0468 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 657342 5660932 Spea_0532 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001500395.1 656680 R 398579 CDS YP_001500396.1 157960362 5660933 complement(657397..657849) 1 NC_009901.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: vfi:VF2386 biotin carboxyl carrier protein of acetyl-CoA carboxylase; acetyl-CoA carboxylase, biotin carboxyl carrier protein 657849 5660933 Spea_0533 Shewanella pealeana ATCC 700345 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001500396.1 657397 R 398579 CDS YP_001500397.1 157960363 5660934 complement(657864..658310) 1 NC_009901.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 658310 5660934 Spea_0534 Shewanella pealeana ATCC 700345 3-dehydroquinate dehydratase YP_001500397.1 657864 R 398579 CDS YP_001500398.1 157960364 5660935 complement(658483..658905) 1 NC_009901.1 PFAM: Class I peptide chain release factor; KEGG: sbm:Shew185_3853 class I peptide chain release factor; peptidyl-tRNA hydrolase domain-containing protein 658905 5660935 Spea_0535 Shewanella pealeana ATCC 700345 peptidyl-tRNA hydrolase domain-containing protein YP_001500398.1 658483 R 398579 CDS YP_001500399.1 157960365 5660936 659098..659469 1 NC_009901.1 KEGG: sdn:Sden_3283 hypothetical protein; hypothetical protein 659469 5660936 Spea_0536 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500399.1 659098 D 398579 CDS YP_001500400.1 157960366 5660937 659541..659717 1 NC_009901.1 KEGG: sbl:Sbal_0473 hypothetical protein; hypothetical protein 659717 5660937 Spea_0537 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500400.1 659541 D 398579 CDS YP_001500401.1 157960367 5660938 659872..660309 1 NC_009901.1 KEGG: slo:Shew_3359 hypothetical protein; hypothetical protein 660309 5660938 Spea_0538 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500401.1 659872 D 398579 CDS YP_001500402.1 157960368 5660939 660602..661948 1 NC_009901.1 KEGG: slo:Shew_3358 outer membrane efflux family protein, putative; outer membrane efflux family protein 661948 5660939 Spea_0539 Shewanella pealeana ATCC 700345 outer membrane efflux family protein YP_001500402.1 660602 D 398579 CDS YP_001500403.1 157960369 5660940 661959..663338 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: slo:Shew_3357 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 663338 5660940 Spea_0540 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001500403.1 661959 D 398579 CDS YP_001500404.1 157960370 5660941 663351..666575 1 NC_009901.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: slo:Shew_3356 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 666575 5660941 Spea_0541 Shewanella pealeana ATCC 700345 CzcA family heavy metal efflux protein YP_001500404.1 663351 D 398579 CDS YP_001500405.1 157960371 5660942 complement(666874..667179) 1 NC_009901.1 KEGG: spc:Sputcn32_0183 hypothetical protein; hypothetical protein 667179 5660942 Spea_0542 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500405.1 666874 R 398579 CDS YP_001500406.1 157960372 5660943 667460..668344 1 NC_009901.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 668344 mepA 5660943 mepA Shewanella pealeana ATCC 700345 penicillin-insensitive murein endopeptidase YP_001500406.1 667460 D 398579 CDS YP_001500407.1 157960373 5660944 complement(668459..670744) 1 NC_009901.1 PFAM: aminotransferase class V; beta-lactamase domain protein; Rhodanese domain protein; KEGG: slo:Shew_3354 aminotransferase, class V; class V aminotransferase 670744 5660944 Spea_0544 Shewanella pealeana ATCC 700345 class V aminotransferase YP_001500407.1 668459 R 398579 CDS YP_001500408.1 157960374 5660945 complement(671034..671570) 1 NC_009901.1 PFAM: protein of unknown function DUF442; KEGG: sfr:Sfri_3576 hypothetical protein; hypothetical protein 671570 5660945 Spea_0545 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500408.1 671034 R 398579 CDS YP_001500409.1 157960375 5660946 complement(671678..672139) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: sfr:Sfri_3560 conserved hypothetical protein 22; hypothetical protein 672139 5660946 Spea_0546 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500409.1 671678 R 398579 CDS YP_001500410.1 157960376 5660947 672400..673461 1 NC_009901.1 KEGG: slo:Shew_3350 hypothetical protein; hypothetical protein 673461 5660947 Spea_0547 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500410.1 672400 D 398579 CDS YP_001500411.1 157960377 5660948 673614..674207 1 NC_009901.1 KEGG: slo:Shew_3349 ATP-dependent protease La (LON) domain protein, putative; ATP-dependent protease La 674207 5660948 Spea_0548 Shewanella pealeana ATCC 700345 ATP-dependent protease La YP_001500411.1 673614 D 398579 CDS YP_001500412.1 157960378 5660949 674518..675456 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: sbm:Shew185_0433 pseudouridine synthase; pseudouridine synthase 675456 5660949 Spea_0549 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001500412.1 674518 D 398579 CDS YP_001500413.1 157960379 5660950 complement(675719..677605) 1 NC_009901.1 KEGG: shn:Shewana3_3710 hypothetical protein; hypothetical protein 677605 5660950 Spea_0550 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500413.1 675719 R 398579 CDS YP_001500414.1 157960380 5660951 677716..678639 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: shn:Shewana3_3709 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 678639 5660951 Spea_0551 Shewanella pealeana ATCC 700345 dTDP-4-dehydrorhamnose reductase YP_001500414.1 677716 D 398579 CDS YP_001500415.1 157960381 5660952 678668..679990 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: slo:Shew_3343 integral membrane sensor signal transduction histidine kinase; histidine kinase 679990 5660952 Spea_0552 Shewanella pealeana ATCC 700345 histidine kinase YP_001500415.1 678668 D 398579 CDS YP_001500416.1 157960382 5660953 679983..680522 1 NC_009901.1 PFAM: response regulator receiver; helix-turn-helix Fis-type; KEGG: sfr:Sfri_1844 response regulator receiver protein; two component Fis family transcriptional regulator 680522 5660953 Spea_0553 Shewanella pealeana ATCC 700345 two component Fis family transcriptional regulator YP_001500416.1 679983 D 398579 CDS YP_001500417.1 157960383 5660954 complement(680705..681853) 1 NC_009901.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: slo:Shew_0508 xanthine/uracil/vitamin C permease; sulfate transporter 681853 5660954 Spea_0554 Shewanella pealeana ATCC 700345 sulfate transporter YP_001500417.1 680705 R 398579 CDS YP_001500418.1 157960384 5660955 complement(682132..682851) 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: son:SO_4141 oxidoreductase, short-chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 682851 5660955 Spea_0555 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001500418.1 682132 R 398579 CDS YP_001500419.1 157960385 5660956 682998..683912 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_4936 substrate-binding transcriptional regulator, LysR family; LysR family transcriptional regulator 683912 5660956 Spea_0556 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500419.1 682998 D 398579 CDS YP_001500420.1 157960386 5660957 684117..685310 1 NC_009901.1 KEGG: slo:Shew_0517 putative plasmid transfer protein; putative plasmid transfer protein 685310 5660957 Spea_0557 Shewanella pealeana ATCC 700345 putative plasmid transfer protein YP_001500420.1 684117 D 398579 CDS YP_001500421.1 157960387 5660958 complement(685317..686048) 1 NC_009901.1 PFAM: protein of unknown function DUF81; KEGG: shw:Sputw3181_3556 protein of unknown function DUF81; hypothetical protein 686048 5660958 Spea_0558 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500421.1 685317 R 398579 CDS YP_001500422.1 157960388 5660959 complement(686241..686555) 1 NC_009901.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 686555 5660959 Spea_0559 Shewanella pealeana ATCC 700345 transcriptional repressor protein MetJ YP_001500422.1 686241 R 398579 CDS YP_001500423.1 157960389 5660960 686767..687927 1 NC_009901.1 KEGG: she:Shewmr4_3439 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase 687927 5660960 Spea_0560 Shewanella pealeana ATCC 700345 O-succinylhomoserine (thiol)-lyase YP_001500423.1 686767 D 398579 CDS YP_001500424.1 157960390 5660961 687943..690336 1 NC_009901.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 690336 metL 5660961 metL Shewanella pealeana ATCC 700345 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_001500424.1 687943 D 398579 CDS YP_001500425.1 157960391 5660962 690542..691432 1 NC_009901.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 691432 metF 5660962 metF Shewanella pealeana ATCC 700345 5,10-methylenetetrahydrofolate reductase YP_001500425.1 690542 D 398579 CDS YP_001500426.1 157960392 5660963 691591..691971 1 NC_009901.1 KEGG: slo:Shew_0526 hypothetical protein; hypothetical protein 691971 5660963 Spea_0563 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500426.1 691591 D 398579 CDS YP_001500427.1 157960393 5660964 692027..692311 1 NC_009901.1 KEGG: shn:Shewana3_3604 hypothetical protein; hypothetical protein 692311 5660964 Spea_0564 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500427.1 692027 D 398579 CDS YP_001500428.1 157960394 5660965 692368..693345 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; UAA transporter; KEGG: she:Shewmr4_3427 protein of unknown function DUF6, transmembrane; hypothetical protein 693345 5660965 Spea_0565 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500428.1 692368 D 398579 CDS YP_001500429.1 157960395 5660966 complement(693864..695735) 1 NC_009901.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: slo:Shew_0531 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 695735 5660966 Spea_0566 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001500429.1 693864 R 398579 CDS YP_001500430.1 157960396 5660967 complement(695953..696921) 1 NC_009901.1 PFAM: peptidase M20; peptidase M28; KEGG: slo:Shew_0532 peptidase M28; peptidase M28 696921 5660967 Spea_0567 Shewanella pealeana ATCC 700345 peptidase M28 YP_001500430.1 695953 R 398579 CDS YP_001500431.1 157960397 5660968 complement(696984..697319) 1 NC_009901.1 KEGG: shm:Shewmr7_0530 hypothetical protein; hypothetical protein 697319 5660968 Spea_0568 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500431.1 696984 R 398579 CDS YP_001500432.1 157960398 5660969 complement(697337..700180) 1 NC_009901.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: shw:Sputw3181_3536 excinuclease ABC, A subunit; excinuclease ABC subunit A 700180 5660969 Spea_0569 Shewanella pealeana ATCC 700345 excinuclease ABC subunit A YP_001500432.1 697337 R 398579 CDS YP_001500433.1 157960399 5660970 700446..701813 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0534 major facilitator superfamily MFS_1; major facilitator transporter 701813 5660970 Spea_0570 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001500433.1 700446 D 398579 CDS YP_001500434.1 157960400 5660971 701847..702515 1 NC_009901.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: shw:Sputw3181_3534 single-strand binding protein; ssDNA-binding protein 702515 5660971 Spea_0571 Shewanella pealeana ATCC 700345 ssDNA-binding protein YP_001500434.1 701847 D 398579 CDS YP_001500435.1 157960401 5660972 complement(702567..703295) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 703295 5660972 Spea_0572 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001500435.1 702567 R 398579 CDS YP_001500436.1 157960402 5660973 complement(703412..703795) 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 703795 5660973 Spea_0573 Shewanella pealeana ATCC 700345 transposase YP_001500436.1 703412 R 398579 CDS YP_001500437.1 157960403 5660974 complement(703914..704645) 1 NC_009901.1 KEGG: sdn:Sden_0410 putative cation efflux protein; putative cation efflux protein 704645 5660974 Spea_0574 Shewanella pealeana ATCC 700345 putative cation efflux protein YP_001500437.1 703914 R 398579 CDS YP_001500438.1 157960404 5660975 705180..705593 1 NC_009901.1 KEGG: slo:Shew_3273 hypothetical protein; hypothetical protein 705593 5660975 Spea_0575 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500438.1 705180 D 398579 CDS YP_001500439.1 157960405 5660976 complement(705652..706683) 1 NC_009901.1 PFAM: Aldose 1-epimerase; KEGG: sdn:Sden_0413 aldose 1-epimerase; aldose 1-epimerase 706683 5660976 Spea_0576 Shewanella pealeana ATCC 700345 aldose 1-epimerase YP_001500439.1 705652 R 398579 CDS YP_001500440.1 157960406 5660977 complement(706720..707874) 1 NC_009901.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: slo:Shew_3271 galactokinase; galactokinase 707874 5660977 Spea_0577 Shewanella pealeana ATCC 700345 galactokinase YP_001500440.1 706720 R 398579 CDS YP_001500441.1 157960407 5660978 complement(708196..709617) 1 NC_009901.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: slo:Shew_3270 SSS sodium solute transporter superfamily; SSS family solute/sodium (Na+) symporter 709617 5660978 Spea_0578 Shewanella pealeana ATCC 700345 SSS family solute/sodium (Na+) symporter YP_001500441.1 708196 R 398579 CDS YP_001500442.1 157960408 5660979 complement(709762..709905) 1 NC_009901.1 KEGG: slo:Shew_3269 beta-galactosidase; beta-galactosidase 709905 5660979 Spea_0579 Shewanella pealeana ATCC 700345 beta-galactosidase YP_001500442.1 709762 R 398579 CDS YP_001500443.1 157960409 5660980 complement(709947..713180) 1 NC_009901.1 PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: slo:Shew_3269 beta-galactosidase; glycoside hydrolase family protein 713180 5660980 Spea_0580 Shewanella pealeana ATCC 700345 glycoside hydrolase family protein YP_001500443.1 709947 R 398579 CDS YP_001500444.1 157960410 5660981 complement(713207..714136) 1 NC_009901.1 PFAM: WD40 domain protein beta Propeller; KEGG: slo:Shew_3268 hypothetical protein; WD40 domain-containing protein 714136 5660981 Spea_0581 Shewanella pealeana ATCC 700345 WD40 domain-containing protein YP_001500444.1 713207 R 398579 CDS YP_001500445.1 157960411 5660982 complement(714205..715863) 1 NC_009901.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: slo:Shew_3267 sodium/hydrogen exchanger; sodium/hydrogen exchanger 715863 5660982 Spea_0582 Shewanella pealeana ATCC 700345 sodium/hydrogen exchanger YP_001500445.1 714205 R 398579 CDS YP_001500446.1 157960412 5660983 complement(716101..717933) 1 NC_009901.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 717933 dipZ 5660983 dipZ Shewanella pealeana ATCC 700345 thiol:disulfide interchange protein YP_001500446.1 716101 R 398579 CDS YP_001500447.1 157960413 5660984 complement(717930..718253) 1 NC_009901.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: sbl:Sbal_3725 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 718253 5660984 Spea_0584 Shewanella pealeana ATCC 700345 CutA1 divalent ion tolerance protein YP_001500447.1 717930 R 398579 CDS YP_001500448.1 157960414 5660985 718573..719160 1 NC_009901.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: slo:Shew_3264 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 719160 5660985 Spea_0585 Shewanella pealeana ATCC 700345 FxsA cytoplasmic membrane protein YP_001500448.1 718573 D 398579 CDS YP_001500449.1 157960415 5660986 complement(719157..720986) 1 NC_009901.1 SMART: serine/threonine protein kinase; KEGG: slo:Shew_3263 serine/threonine protein kinase; serine/threonine protein kinase 720986 5660986 Spea_0586 Shewanella pealeana ATCC 700345 serine/threonine protein kinase YP_001500449.1 719157 R 398579 CDS YP_001500450.1 157960416 5660987 721203..721544 1 NC_009901.1 KEGG: slo:Shew_3262 hypothetical protein; hypothetical protein 721544 5660987 Spea_0587 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500450.1 721203 D 398579 CDS YP_001500451.1 157960417 5660988 721765..722424 1 NC_009901.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase 722424 5660988 Spea_0588 Shewanella pealeana ATCC 700345 thiopurine S-methyltransferase YP_001500451.1 721765 D 398579 CDS YP_001500452.1 157960418 5660989 complement(722699..723733) 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: sfr:Sfri_0503 porin, gram-negative type; porin 723733 5660989 Spea_0589 Shewanella pealeana ATCC 700345 porin YP_001500452.1 722699 R 398579 CDS YP_001500453.1 157960419 5660990 complement(724469..725533) 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_3252 porin, gram-negative type; porin 725533 5660990 Spea_0590 Shewanella pealeana ATCC 700345 porin YP_001500453.1 724469 R 398579 CDS YP_001500454.1 157960420 5660991 725925..726725 1 NC_009901.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: slo:Shew_3251 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD-binding protein 726725 5660991 Spea_0591 Shewanella pealeana ATCC 700345 UBA/THIF-type NAD/FAD-binding protein YP_001500454.1 725925 D 398579 CDS YP_001500455.1 157960421 5660992 726936..727553 1 NC_009901.1 KEGG: slo:Shew_3248 hypothetical protein; hypothetical protein 727553 5660992 Spea_0592 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500455.1 726936 D 398579 CDS YP_001500456.1 157960422 5660993 complement(727650..727784) 1 NC_009901.1 KEGG: saz:Sama_0549 hypothetical protein; hypothetical protein 727784 5660993 Spea_0593 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500456.1 727650 R 398579 CDS YP_001500457.1 157960423 5664685 728937..730808 1 NC_009901.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: son:SO_A0048 prolyl oligopeptidase family protein; peptidase S9 prolyl oligopeptidase 730808 5664685 Spea_0594 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001500457.1 728937 D 398579 CDS YP_001500458.1 157960424 5660995 complement(730899..732023) 1 NC_009901.1 PFAM: peptidase M50; KEGG: slo:Shew_3232 peptidase M50; peptidase M50 732023 5660995 Spea_0595 Shewanella pealeana ATCC 700345 peptidase M50 YP_001500458.1 730899 R 398579 CDS YP_001500459.1 157960425 5660996 complement(732137..733801) 1 NC_009901.1 PFAM: protein of unknown function DUF342; KEGG: slo:Shew_3231 protein of unknown function DUF342; hypothetical protein 733801 5660996 Spea_0596 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500459.1 732137 R 398579 CDS YP_001500460.1 157960426 5660997 complement(734320..735345) 1 NC_009901.1 PFAM: methyltransferase small; Methyltransferase type 12; Methyltransferase small domain protein; KEGG: she:Shewmr4_0687 rRNA (guanine-N(2)-)-methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 735345 5660997 Spea_0597 Shewanella pealeana ATCC 700345 rRNA (guanine-N(2)-)-methyltransferase YP_001500460.1 734320 R 398579 CDS YP_001500461.1 157960427 5660998 complement(735612..736949) 1 NC_009901.1 PFAM: Alkaline phosphatase; KEGG: slo:Shew_3226 alkaline phosphatase; alkaline phosphatase 736949 5660998 Spea_0598 Shewanella pealeana ATCC 700345 alkaline phosphatase YP_001500461.1 735612 R 398579 CDS YP_001500462.1 157960428 5660999 complement(736964..737917) 1 NC_009901.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 737917 5660999 Spea_0599 Shewanella pealeana ATCC 700345 glutathione synthetase YP_001500462.1 736964 R 398579 CDS YP_001500463.1 157960429 5661000 complement(738034..738765) 1 NC_009901.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 738765 5661000 Spea_0600 Shewanella pealeana ATCC 700345 16S ribosomal RNA methyltransferase RsmE YP_001500463.1 738034 R 398579 CDS YP_001500464.1 157960430 5661001 739231..739983 1 NC_009901.1 PFAM: Endonuclease I; KEGG: ppr:PBPRC0029 putative endonuclease I; deoxyribonuclease I 739983 5661001 Spea_0601 Shewanella pealeana ATCC 700345 deoxyribonuclease I YP_001500464.1 739231 D 398579 CDS YP_001500465.1 157960431 5661002 complement(740018..740584) 1 NC_009901.1 PFAM: protein of unknown function DUF335 SprT; SMART: protein of unknown function SprT; KEGG: slo:Shew_3222 protein of unknown function DUF335, SprT; hypothetical protein 740584 5661002 Spea_0602 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500465.1 740018 R 398579 CDS YP_001500466.1 157960432 5661003 complement(740862..742022) 1 NC_009901.1 KEGG: slo:Shew_3221 hypothetical protein; hypothetical protein 742022 5661003 Spea_0603 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500466.1 740862 R 398579 CDS YP_001500467.1 157960433 5661004 complement(742513..743424) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_3219 transcriptional regulator, LysR family; LysR family transcriptional regulator 743424 5661004 Spea_0604 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500467.1 742513 R 398579 CDS YP_001500468.1 157960434 5661005 743547..748100 1 NC_009901.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: slo:Shew_3218 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 748100 5661005 Spea_0605 Shewanella pealeana ATCC 700345 carbamoyl-phosphate synthase L chain ATP-binding YP_001500468.1 743547 D 398579 CDS YP_001500469.1 157960435 5661006 complement(748187..749431) 1 NC_009901.1 PFAM: sodium/hydrogen exchanger; KEGG: noc:Noc_0960 sodium/hydrogen exchanger; sodium/hydrogen exchanger 749431 5661006 Spea_0606 Shewanella pealeana ATCC 700345 sodium/hydrogen exchanger YP_001500469.1 748187 R 398579 CDS YP_001500470.1 157960436 5661007 complement(749576..750388) 1 NC_009901.1 KEGG: spc:Sputcn32_3895 hypothetical protein; hypothetical protein 750388 5661007 Spea_0607 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500470.1 749576 R 398579 CDS YP_001500471.1 157960437 5661008 complement(750412..751557) 1 NC_009901.1 KEGG: spc:Sputcn32_3894 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase 751557 5661008 Spea_0608 Shewanella pealeana ATCC 700345 UDP-galactopyranose mutase YP_001500471.1 750412 R 398579 CDS YP_001500472.1 157960438 5661009 752424..753128 1 NC_009901.1 PFAM: Sporulation domain protein; KEGG: pha:PSHAa0751 hypothetical protein; sporulation domain-containing protein 753128 5661009 Spea_0609 Shewanella pealeana ATCC 700345 sporulation domain-containing protein YP_001500472.1 752424 D 398579 CDS YP_001500473.1 157960439 5661010 753282..753911 1 NC_009901.1 hypothetical protein 753911 5661010 Spea_0610 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500473.1 753282 D 398579 CDS YP_001500474.1 157960440 5661011 753974..754423 1 NC_009901.1 hypothetical protein 754423 5661011 Spea_0611 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500474.1 753974 D 398579 CDS YP_001500475.1 157960441 5661012 754521..755360 1 NC_009901.1 KEGG: pol:Bpro_5311 hypothetical protein; hypothetical protein 755360 5661012 Spea_0612 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500475.1 754521 D 398579 CDS YP_001500476.1 157960442 5661013 755440..758571 1 NC_009901.1 KEGG: pol:Bpro_5310 hypothetical protein; hypothetical protein 758571 5661013 Spea_0613 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500476.1 755440 D 398579 CDS YP_001500477.1 157960443 5661014 758640..759488 1 NC_009901.1 PFAM: Sporulation domain protein; KEGG: pha:PSHAa0753 hypothetical protein; sporulation domain-containing protein 759488 5661014 Spea_0614 Shewanella pealeana ATCC 700345 sporulation domain-containing protein YP_001500477.1 758640 D 398579 CDS YP_001500478.1 157960444 5661015 complement(759612..759941) 1 NC_009901.1 KEGG: sdn:Sden_0845 hypothetical protein; hypothetical protein 759941 5661015 Spea_0615 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500478.1 759612 R 398579 CDS YP_001500479.1 157960445 5661016 complement(760002..761036) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: psa:PST_2459 transcriptional regulator, AraC family; AraC family transcriptional regulator 761036 5661016 Spea_0616 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001500479.1 760002 R 398579 CDS YP_001500480.1 157960446 5661017 761205..762566 1 NC_009901.1 KEGG: sma:SAV5462 hypothetical protein; hypothetical protein 762566 5661017 Spea_0617 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500480.1 761205 D 398579 CDS YP_001500481.1 157960447 5661018 762721..763605 1 NC_009901.1 KEGG: sfr:Sfri_2734 hypothetical protein; hypothetical protein 763605 5661018 Spea_0618 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500481.1 762721 D 398579 CDS YP_001500482.1 157960448 5661019 complement(763617..763856) 1 NC_009901.1 hypothetical protein 763856 5661019 Spea_0619 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500482.1 763617 R 398579 CDS YP_001500483.1 157960449 5661020 complement(763871..764296) 1 NC_009901.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: slo:Shew_3209 nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit NapB 764296 5661020 Spea_0620 Shewanella pealeana ATCC 700345 nitrate reductase cytochrome c-type subunit NapB YP_001500483.1 763871 R 398579 CDS YP_001500484.1 157960450 5661021 complement(764293..765189) 1 NC_009901.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 765189 napH 5661021 napH Shewanella pealeana ATCC 700345 quinol dehydrogenase membrane component YP_001500484.1 764293 R 398579 CDS YP_001500485.1 157960451 5661022 complement(765186..765920) 1 NC_009901.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 765920 napG 5661022 napG Shewanella pealeana ATCC 700345 quinol dehydrogenase periplasmic component YP_001500485.1 765186 R 398579 CDS YP_001500486.1 157960452 5661023 complement(765981..768461) 1 NC_009901.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 768461 5661023 Spea_0623 Shewanella pealeana ATCC 700345 nitrate reductase catalytic subunit YP_001500486.1 765981 R 398579 CDS YP_001500487.1 157960453 5661024 complement(768451..768726) 1 NC_009901.1 PFAM: NapD family protein; KEGG: slo:Shew_3205 NapD family protein; NapD family protein 768726 5661024 Spea_0624 Shewanella pealeana ATCC 700345 NapD family protein YP_001500487.1 768451 R 398579 CDS YP_001500488.1 157960454 5661025 complement(769086..770192) 1 NC_009901.1 KEGG: slo:Shew_3203 hypothetical protein; hypothetical protein 770192 5661025 Spea_0625 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500488.1 769086 R 398579 CDS YP_001500489.1 157960455 5661026 complement(770189..772726) 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: sbm:Shew185_0832 protein of unknown function DUF214; hypothetical protein 772726 5661026 Spea_0626 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500489.1 770189 R 398579 CDS YP_001500490.1 157960456 5661027 complement(772719..773387) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO_0857 ABC transporter, ATP-binding protein; ABC transporter-like protein 773387 5661027 Spea_0627 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500490.1 772719 R 398579 CDS YP_001500491.1 157960457 5661028 773739..779036 1 NC_009901.1 KEGG: slo:Shew_3200 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 779036 5661028 Spea_0628 Shewanella pealeana ATCC 700345 multi-sensor hybrid histidine kinase YP_001500491.1 773739 D 398579 CDS YP_001500492.1 157960458 5661029 779176..780195 1 NC_009901.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: slo:Shew_3199 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 780195 5661029 Spea_0629 Shewanella pealeana ATCC 700345 response regulator receiver modulated metal dependent phosphohydrolase YP_001500492.1 779176 D 398579 CDS YP_001500493.1 157960459 5661030 complement(780304..781275) 1 NC_009901.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: slo:Shew_3198 glycine cleavage T protein (aminomethyl transferase); glycine cleavage T protein (aminomethyl transferase) 781275 5661030 Spea_0630 Shewanella pealeana ATCC 700345 glycine cleavage T protein (aminomethyl transferase) YP_001500493.1 780304 R 398579 CDS YP_001500494.1 157960460 5661031 complement(781736..782965) 1 NC_009901.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 782965 5661031 Spea_0631 Shewanella pealeana ATCC 700345 D-3-phosphoglycerate dehydrogenase YP_001500494.1 781736 R 398579 CDS YP_001500495.1 157960461 5661032 783222..783836 1 NC_009901.1 KEGG: slo:Shew_3195 hypothetical protein; hypothetical protein 783836 5661032 Spea_0632 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500495.1 783222 D 398579 CDS YP_001500496.1 157960462 5661033 784084..784758 1 NC_009901.1 PFAM: regulatory protein LuxR; KEGG: saz:Sama_2948 response regulator receiver protein; LuxR family transcriptional regulator 784758 5661033 Spea_0633 Shewanella pealeana ATCC 700345 LuxR family transcriptional regulator YP_001500496.1 784084 D 398579 CDS YP_001500497.1 157960463 5661034 785435..786661 1 NC_009901.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: vfi:VFA0967 nucleoside permease NupC; Na+ dependent nucleoside transporter 786661 5661034 Spea_0634 Shewanella pealeana ATCC 700345 Na+ dependent nucleoside transporter YP_001500497.1 785435 D 398579 CDS YP_001500498.1 157960464 5661035 786755..787465 1 NC_009901.1 TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: aha:AHA_3687 purine nucleoside phosphorylase; purine nucleoside phosphorylase 787465 5661035 Spea_0635 Shewanella pealeana ATCC 700345 purine nucleoside phosphorylase YP_001500498.1 786755 D 398579 CDS YP_001500499.1 157960465 5661036 787836..788273 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: slo:Shew_3192 uncharacterized domain 1 protein; thioesterase superfamily protein 788273 5661036 Spea_0636 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001500499.1 787836 D 398579 CDS YP_001500500.1 157960466 5661037 788554..788808 1 NC_009901.1 KEGG: sdn:Sden_3091 hypothetical protein; hypothetical protein 788808 5661037 Spea_0637 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500500.1 788554 D 398579 CDS YP_001500501.1 157960467 5661038 789273..790736 1 NC_009901.1 PFAM: Catalase domain protein; KEGG: slo:Shew_3190 catalase; catalase 790736 5661038 Spea_0638 Shewanella pealeana ATCC 700345 catalase YP_001500501.1 789273 D 398579 CDS YP_001500502.1 157960468 5664686 complement(791003..791557) 1 NC_009901.1 PFAM: protein of unknown function UPF0016; KEGG: son:SO_1071 hypothetical protein; hypothetical protein 791557 5664686 Spea_0640 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500502.1 791003 R 398579 CDS YP_001500503.1 157960469 5661040 792238..793437 1 NC_009901.1 PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: slo:Shew_3188 aromatic amino acid permease; aromatic amino acid permease 793437 5661040 Spea_0641 Shewanella pealeana ATCC 700345 aromatic amino acid permease YP_001500503.1 792238 D 398579 CDS YP_001500504.1 157960470 5661041 793716..795872 1 NC_009901.1 KEGG: slo:Shew_3187 hypothetical protein; hypothetical protein 795872 5661041 Spea_0642 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500504.1 793716 D 398579 CDS YP_001500505.1 157960471 5661042 796579..797094 1 NC_009901.1 hypothetical protein 797094 5661042 Spea_0643 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500505.1 796579 D 398579 CDS YP_001500506.1 157960472 5661043 797245..797997 1 NC_009901.1 hypothetical protein 797997 5661043 Spea_0644 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500506.1 797245 D 398579 CDS YP_001500507.1 157960473 5661044 complement(798736..799662) 1 NC_009901.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: slo:Shew_0658 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 799662 5661044 Spea_0645 Shewanella pealeana ATCC 700345 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_001500507.1 798736 R 398579 CDS YP_001500508.1 157960474 5661045 799745..801193 1 NC_009901.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 801193 5661045 Spea_0646 Shewanella pealeana ATCC 700345 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_001500508.1 799745 D 398579 CDS YP_001500509.1 157960475 5661046 801234..802154 1 NC_009901.1 KEGG: shm:Shewmr7_0887 hypothetical protein; hypothetical protein 802154 5661046 Spea_0647 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500509.1 801234 D 398579 CDS YP_001500510.1 157960476 5661047 802320..802793 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: saz:Sama_0733 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 802793 5661047 Spea_0648 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001500510.1 802320 D 398579 CDS YP_001500511.1 157960477 5661048 complement(803015..804415) 1 NC_009901.1 PFAM: MltA-interacting MipA family protein; KEGG: vfi:VF1562 hypothetical protein; MltA-interacting MipA family protein 804415 5661048 Spea_0649 Shewanella pealeana ATCC 700345 MltA-interacting MipA family protein YP_001500511.1 803015 R 398579 CDS YP_001500512.1 157960478 5661049 complement(804859..806241) 1 NC_009901.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: slo:Shew_0662 NAD(P) transhydrogenase, beta subunit; NAD(P)(+) transhydrogenase 806241 5661049 Spea_0650 Shewanella pealeana ATCC 700345 NAD(P)(+) transhydrogenase YP_001500512.1 804859 R 398579 CDS YP_001500513.1 157960479 5661050 complement(806248..806523) 1 NC_009901.1 KEGG: slo:Shew_0663 oxidoreductase; oxidoreductase 806523 5661050 Spea_0651 Shewanella pealeana ATCC 700345 oxidoreductase YP_001500513.1 806248 R 398579 CDS YP_001500514.1 157960480 5661051 complement(806523..807752) 1 NC_009901.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: slo:Shew_0664 alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 807752 5661051 Spea_0652 Shewanella pealeana ATCC 700345 NAD(P) transhydrogenase subunit alpha YP_001500514.1 806523 R 398579 CDS YP_001500515.1 157960481 5661052 808052..809848 1 NC_009901.1 TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: sfr:Sfri_3193 sulfite reductase (NADPH) flavoprotein, alpha chain; sulfite reductase (NADPH) flavoprotein subunit alpha 809848 5661052 Spea_0653 Shewanella pealeana ATCC 700345 sulfite reductase (NADPH) flavoprotein subunit alpha YP_001500515.1 808052 D 398579 CDS YP_001500516.1 157960482 5661053 809939..811636 1 NC_009901.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 811636 5661053 Spea_0654 Shewanella pealeana ATCC 700345 sulfite reductase subunit beta YP_001500516.1 809939 D 398579 CDS YP_001500517.1 157960483 5661054 811629..812384 1 NC_009901.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 812384 5661054 Spea_0655 Shewanella pealeana ATCC 700345 phosphoadenosine phosphosulfate reductase YP_001500517.1 811629 D 398579 CDS YP_001500518.1 157960484 5661055 813065..814789 1 NC_009901.1 KEGG: slo:Shew_0668 hypothetical protein; hypothetical protein 814789 5661055 Spea_0656 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500518.1 813065 D 398579 CDS YP_001500519.1 157960485 5661056 814903..815328 1 NC_009901.1 KEGG: pfl:PFL_5750 hypothetical protein; hypothetical protein 815328 5661056 Spea_0657 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500519.1 814903 D 398579 CDS YP_001500520.1 157960486 5661057 815563..816114 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: slo:Shew_0669 redoxin domain protein; alkyl hydroperoxide reductase 816114 5661057 Spea_0658 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001500520.1 815563 D 398579 CDS YP_001500521.1 157960487 5661058 complement(817195..818055) 1 NC_009901.1 PFAM: protein of unknown function RIO1; KEGG: shm:Shewmr7_3358 protein of unknown function RIO1; hypothetical protein 818055 5661058 Spea_0659 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500521.1 817195 R 398579 CDS YP_001500522.1 157960488 5661059 complement(818174..819670) 1 NC_009901.1 KEGG: shw:Sputw3181_0899 peptidase S41; hypothetical protein 819670 5661059 Spea_0660 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500522.1 818174 R 398579 CDS YP_001500523.1 157960489 5661060 complement(819752..820717) 1 NC_009901.1 PFAM: phospholipase A1; KEGG: saz:Sama_2893 phospholipase A(1); phospholipase A(1) 820717 5661060 Spea_0661 Shewanella pealeana ATCC 700345 phospholipase A(1) YP_001500523.1 819752 R 398579 CDS YP_001500524.1 157960490 5661061 821127..821942 1 NC_009901.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sbm:Shew185_0927 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 821942 5661061 Spea_0662 Shewanella pealeana ATCC 700345 uroporphyrin-III C-methyltransferase YP_001500524.1 821127 D 398579 CDS YP_001500525.1 157960491 5661062 821969..822877 1 NC_009901.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 822877 5661062 Spea_0663 Shewanella pealeana ATCC 700345 sulfate adenylyltransferase subunit 2 YP_001500525.1 821969 D 398579 CDS YP_001500526.1 157960492 5661063 822927..824366 1 NC_009901.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 824366 cysN 5661063 cysN Shewanella pealeana ATCC 700345 sulfate adenylyltransferase subunit 1 YP_001500526.1 822927 D 398579 CDS YP_001500527.1 157960493 5661064 824369..826093 1 NC_009901.1 PFAM: Citrate transporter; TrkA-C domain protein; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: she:Shewmr4_3070 TrkA-C domain protein; TrkA domain-containing protein 826093 5661064 Spea_0665 Shewanella pealeana ATCC 700345 TrkA domain-containing protein YP_001500527.1 824369 D 398579 CDS YP_001500528.1 157960494 5661065 826183..826800 1 NC_009901.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 826800 5661065 Spea_0666 Shewanella pealeana ATCC 700345 adenylylsulfate kinase YP_001500528.1 826183 D 398579 CDS YP_001500529.1 157960495 5661066 826858..827301 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shn:Shewana3_2239 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 827301 5661066 Spea_0667 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500529.1 826858 D 398579 CDS YP_001500530.1 157960496 5661067 complement(827407..828267) 1 NC_009901.1 KEGG: sbl:Sbal_3402 hypothetical protein; hypothetical protein 828267 5661067 Spea_0668 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500530.1 827407 R 398579 CDS YP_001500531.1 157960497 5661068 complement(828340..829530) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbm:Shew185_0935 major facilitator superfamily MFS_1; major facilitator transporter 829530 5661068 Spea_0669 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001500531.1 828340 R 398579 CDS YP_001500532.1 157960498 5661069 829855..831264 1 NC_009901.1 KEGG: sbm:Shew185_0936 hypothetical protein; hypothetical protein 831264 5661069 Spea_0670 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500532.1 829855 D 398579 CDS YP_001500533.1 157960499 5661070 831293..832444 1 NC_009901.1 KEGG: slo:Shew_0676 putative lipoprotein; putative lipoprotein 832444 5661070 Spea_0671 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001500533.1 831293 D 398579 CDS YP_001500534.1 157960500 5661071 832557..834212 1 NC_009901.1 PFAM: protein of unknown function DUF1111; KEGG: sfr:Sfri_0812 protein of unknown function DUF1111; hypothetical protein 834212 5661071 Spea_0672 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500534.1 832557 D 398579 CDS YP_001500535.1 157960501 5661072 834432..834965 1 NC_009901.1 KEGG: slo:Shew_0678 protoporphyrinogen oxidase; protoporphyrinogen oxidase 834965 5661072 Spea_0673 Shewanella pealeana ATCC 700345 protoporphyrinogen oxidase YP_001500535.1 834432 D 398579 CDS YP_001500536.1 157960502 5661073 834980..835510 1 NC_009901.1 KEGG: slo:Shew_0679 hypothetical protein; hypothetical protein 835510 5661073 Spea_0674 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500536.1 834980 D 398579 CDS YP_001500537.1 157960503 5661074 complement(835795..836511) 1 NC_009901.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: slo:Shew_3180 pseudouridine synthase; pseudouridine synthase 836511 5661074 Spea_0675 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001500537.1 835795 R 398579 CDS YP_001500538.1 157960504 5661075 complement(836524..837237) 1 NC_009901.1 KEGG: slo:Shew_3179 hypothetical protein; hypothetical protein 837237 5661075 Spea_0676 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500538.1 836524 R 398579 CDS YP_001500539.1 157960505 5661076 complement(837389..838807) 1 NC_009901.1 PFAM: Na+/H+ antiporter NhaC; KEGG: slo:Shew_3178 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 838807 5661076 Spea_0677 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001500539.1 837389 R 398579 CDS YP_001500540.1 157960506 5661077 839151..839675 1 NC_009901.1 KEGG: ppr:PBPRB1186 hypothetical protein; hypothetical protein 839675 5661077 Spea_0678 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500540.1 839151 D 398579 CDS YP_001500541.1 157960507 5661078 839735..841789 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: sfr:Sfri_1337 diguanylate cyclase; TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase 841789 5661078 Spea_0679 Shewanella pealeana ATCC 700345 TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase YP_001500541.1 839735 D 398579 CDS YP_001500542.1 157960508 5661079 842022..843188 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_2481 porin, gram-negative type; porin 843188 5661079 Spea_0680 Shewanella pealeana ATCC 700345 porin YP_001500542.1 842022 D 398579 CDS YP_001500543.1 157960509 5661080 complement(843229..843957) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 843957 5661080 Spea_0681 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001500543.1 843229 R 398579 CDS YP_001500544.1 157960510 5661081 complement(844074..844457) 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 844457 5661081 Spea_0682 Shewanella pealeana ATCC 700345 transposase YP_001500544.1 844074 R 398579 CDS YP_001500545.1 157960511 5661082 complement(844599..845309) 1 NC_009901.1 PFAM: protein of unknown function DUF541; KEGG: shn:Shewana3_3626 protein of unknown function DUF541; hypothetical protein 845309 5661082 Spea_0683 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500545.1 844599 R 398579 CDS YP_001500546.1 157960512 5661083 complement(845453..846097) 1 NC_009901.1 KEGG: ter:Tery_4461 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; cob(II)yrinic acid a,c-diamide reductase 846097 5661083 Spea_0684 Shewanella pealeana ATCC 700345 cob(II)yrinic acid a,c-diamide reductase YP_001500546.1 845453 R 398579 CDS YP_001500547.1 157960513 5661084 complement(846196..847512) 1 NC_009901.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 847512 5661084 Spea_0685 Shewanella pealeana ATCC 700345 anaerobic C4-dicarboxylate transporter YP_001500547.1 846196 R 398579 CDS YP_001500548.1 157960514 5661085 847864..849249 1 NC_009901.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: slo:Shew_3144 UDP-N-acetylmuramate; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 849249 5661085 Spea_0686 Shewanella pealeana ATCC 700345 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_001500548.1 847864 D 398579 CDS YP_001500549.1 157960515 5661086 849256..849909 1 NC_009901.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: shn:Shewana3_0792 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; aromatic acid decarboxylase 849909 5661086 Spea_0687 Shewanella pealeana ATCC 700345 aromatic acid decarboxylase YP_001500549.1 849256 D 398579 CDS YP_001500550.1 157960516 5661087 849917..850450 1 NC_009901.1 KEGG: slo:Shew_3142 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 850450 5661087 Spea_0688 Shewanella pealeana ATCC 700345 hypoxanthine phosphoribosyltransferase YP_001500550.1 849917 D 398579 CDS YP_001500551.1 157960517 5661088 850577..851521 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_3141 ABC transporter-related protein; ABC transporter-like protein 851521 5661088 Spea_0689 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500551.1 850577 D 398579 CDS YP_001500552.1 157960518 5661089 851518..852294 1 NC_009901.1 PFAM: ABC-2 type transporter; KEGG: slo:Shew_3140 ABC-2 type transporter; ABC-2 type transporter 852294 5661089 Spea_0690 Shewanella pealeana ATCC 700345 ABC-2 type transporter YP_001500552.1 851518 D 398579 CDS YP_001500553.1 157960519 5661090 complement(852366..852701) 1 NC_009901.1 KEGG: slo:Shew_3139 hypothetical protein; hypothetical protein 852701 5661090 Spea_0691 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500553.1 852366 R 398579 CDS YP_001500554.1 157960520 5661091 complement(852786..853292) 1 NC_009901.1 KEGG: shm:Shewmr7_3298 hypothetical protein; hypothetical protein 853292 5661091 Spea_0692 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500554.1 852786 R 398579 CDS YP_001500555.1 157960521 5661092 complement(853642..854493) 1 NC_009901.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 854493 panC 5661092 panC Shewanella pealeana ATCC 700345 pantoate--beta-alanine ligase YP_001500555.1 853642 R 398579 CDS YP_001500556.1 157960522 5661093 complement(854565..855359) 1 NC_009901.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 855359 panB 5661093 panB Shewanella pealeana ATCC 700345 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001500556.1 854565 R 398579 CDS YP_001500557.1 157960523 5661094 complement(855493..855987) 1 NC_009901.1 KEGG: shm:Shewmr7_3295 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 855987 5661094 Spea_0695 Shewanella pealeana ATCC 700345 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001500557.1 855493 R 398579 CDS YP_001500558.1 157960524 5661095 complement(855987..857291) 1 NC_009901.1 KEGG: slo:Shew_3131 poly(A) polymerase; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 857291 5661095 Spea_0696 Shewanella pealeana ATCC 700345 poly(A) polymerase YP_001500558.1 855987 R 398579 CDS YP_001500559.1 157960525 5661096 complement(857471..858349) 1 NC_009901.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: sbm:Shew185_0848 glutamate--tRNA ligase; glutamyl-tRNA synthetase 858349 5661096 Spea_0697 Shewanella pealeana ATCC 700345 glutamyl-tRNA synthetase YP_001500559.1 857471 R 398579 CDS YP_001500560.1 157960526 5661097 complement(858408..858851) 1 NC_009901.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: sbm:Shew185_0849 transcriptional regulator, TraR/DksA family; TraR/DksA family transcriptional regulator 858851 5661097 Spea_0698 Shewanella pealeana ATCC 700345 TraR/DksA family transcriptional regulator YP_001500560.1 858408 R 398579 CDS YP_001500561.1 157960527 5661098 complement(859010..859714) 1 NC_009901.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 859714 5661098 Spea_0699 Shewanella pealeana ATCC 700345 sugar fermentation stimulation protein A YP_001500561.1 859010 R 398579 CDS YP_001500562.1 157960528 5661099 860251..861528 1 NC_009901.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 861528 5661099 Spea_0700 Shewanella pealeana ATCC 700345 aminopeptidase B YP_001500562.1 860251 D 398579 CDS YP_001500563.1 157960529 5661100 861751..862677 1 NC_009901.1 PFAM: transcriptional regulator domain protein; KEGG: shn:Shewana3_0468 putative transcriptional regulator, CadC; transcriptional regulator CadC 862677 5661100 Spea_0701 Shewanella pealeana ATCC 700345 transcriptional regulator CadC YP_001500563.1 861751 D 398579 CDS YP_001500564.1 157960530 5661101 complement(862938..863249) 1 NC_009901.1 KEGG: pin:Ping_1759 hypothetical protein; hypothetical protein 863249 5661101 Spea_0702 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500564.1 862938 R 398579 CDS YP_001500565.1 157960531 5661102 complement(863577..864098) 1 NC_009901.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: pin:Ping_1760 2'-5' RNA ligase; 2'-5' RNA ligase 864098 5661102 Spea_0703 Shewanella pealeana ATCC 700345 2'-5' RNA ligase YP_001500565.1 863577 R 398579 CDS YP_001500566.1 157960532 5661103 864225..866834 1 NC_009901.1 KEGG: sbl:Sbal_0582 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases; ATP-dependent helicase HrpB 866834 5661103 Spea_0704 Shewanella pealeana ATCC 700345 ATP-dependent helicase HrpB YP_001500566.1 864225 D 398579 CDS YP_001500567.1 157960533 5661104 866859..869231 1 NC_009901.1 KEGG: slo:Shew_3123 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1B 869231 5661104 Spea_0705 Shewanella pealeana ATCC 700345 penicillin-binding protein 1B YP_001500567.1 866859 D 398579 CDS YP_001500568.1 157960534 5661105 869221..869709 1 NC_009901.1 KEGG: sdn:Sden_0673 hypothetical protein; hypothetical protein 869709 5661105 Spea_0706 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500568.1 869221 D 398579 CDS YP_001500569.1 157960535 5661106 complement(869807..870991) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_2000 major facilitator superfamily MFS_1; sugar efflux transporter 870991 5661106 Spea_0707 Shewanella pealeana ATCC 700345 sugar efflux transporter YP_001500569.1 869807 R 398579 CDS YP_001500570.1 157960536 5661107 complement(871391..871843) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1378 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 871843 5661107 Spea_0708 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500570.1 871391 R 398579 CDS YP_001500571.1 157960537 5661108 complement(872041..872829) 1 NC_009901.1 PFAM: PepSY-associated TM helix domain protein; KEGG: slo:Shew_3122 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 872829 5661108 Spea_0709 Shewanella pealeana ATCC 700345 PepSY-associated TM helix domain-containing protein YP_001500571.1 872041 R 398579 CDS YP_001500572.1 157960538 5661109 complement(873114..874025) 1 NC_009901.1 hypothetical protein 874025 5661109 Spea_0710 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500572.1 873114 R 398579 CDS YP_001500573.1 157960539 5661110 complement(874000..874521) 1 NC_009901.1 PFAM: FMN-binding domain protein; KEGG: sbl:Sbal_2015 FMN-binding domain protein; FMN-binding domain-containing protein 874521 5661110 Spea_0711 Shewanella pealeana ATCC 700345 FMN-binding domain-containing protein YP_001500573.1 874000 R 398579 CDS YP_001500574.1 157960540 5661111 complement(874636..875814) 1 NC_009901.1 PFAM: phosphate-selective porin O and P; KEGG: slo:Shew_3120 phosphate-selective porin O and P; phosphate-selective porin O and P 875814 5661111 Spea_0712 Shewanella pealeana ATCC 700345 phosphate-selective porin O and P YP_001500574.1 874636 R 398579 CDS YP_001500575.1 157960541 5661112 complement(876103..878292) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shm:Shewmr7_3399 TonB-dependent receptor; TonB-dependent receptor 878292 5661112 Spea_0713 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500575.1 876103 R 398579 CDS YP_001500576.1 157960542 5661113 878528..879232 1 NC_009901.1 KEGG: shn:Shewana3_0631 hypothetical protein; hypothetical protein 879232 5661113 Spea_0714 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500576.1 878528 D 398579 CDS YP_001500577.1 157960543 5661114 879989..881359 1 NC_009901.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: slo:Shew_0496 amino acid carrier protein; amino acid carrier protein 881359 5661114 Spea_0715 Shewanella pealeana ATCC 700345 amino acid carrier protein YP_001500577.1 879989 D 398579 CDS YP_001500578.1 157960544 5661115 881772..885446 1 NC_009901.1 KEGG: slo:Shew_3118 hypothetical protein; hypothetical protein 885446 5661115 Spea_0716 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500578.1 881772 D 398579 CDS YP_001500579.1 157960545 5661116 885446..886099 1 NC_009901.1 KEGG: slo:Shew_3117 hypothetical protein; hypothetical protein 886099 5661116 Spea_0717 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500579.1 885446 D 398579 CDS YP_001500580.1 157960546 5661117 886101..887321 1 NC_009901.1 KEGG: shm:Shewmr7_3380 hypothetical protein; hypothetical protein 887321 5661117 Spea_0718 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500580.1 886101 D 398579 CDS YP_001500581.1 157960547 5661118 888179..889435 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: shw:Sputw3181_3503 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 889435 5661118 Spea_0719 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001500581.1 888179 D 398579 CDS YP_001500582.1 157960548 5661119 complement(889568..890950) 1 NC_009901.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sfr:Sfri_3688 two component, sigma54 specific, transcriptional regulator, fis family protein; Fis family two component sigma54 specific transcriptional regulator 890950 5661119 Spea_0720 Shewanella pealeana ATCC 700345 Fis family two component sigma54 specific transcriptional regulator YP_001500582.1 889568 R 398579 CDS YP_001500583.1 157960549 5661120 complement(890950..892977) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; SMART: extracellular solute-binding protein family 3; KEGG: slo:Shew_3113 histidine kinase; histidine kinase 892977 5661120 Spea_0721 Shewanella pealeana ATCC 700345 histidine kinase YP_001500583.1 890950 R 398579 CDS YP_001500584.1 157960550 5661121 893397..895187 1 NC_009901.1 KEGG: slo:Shew_3112 flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; flavocytochrome c 895187 5661121 Spea_0722 Shewanella pealeana ATCC 700345 flavocytochrome c YP_001500584.1 893397 D 398579 CDS YP_001500585.1 157960551 5661122 895957..896763 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: bld:BLi02552 YqjL; alpha/beta hydrolase fold protein 896763 5661122 Spea_0723 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001500585.1 895957 D 398579 CDS YP_001500586.1 157960552 5661123 complement(897237..898313) 1 NC_009901.1 KEGG: sdn:Sden_2209 hypothetical protein; hypothetical protein 898313 5661123 Spea_0724 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500586.1 897237 R 398579 CDS YP_001500587.1 157960553 5661124 899535..900539 1 NC_009901.1 PFAM: basic membrane lipoprotein; KEGG: pin:Ping_1297 basic membrane lipoprotein; basic membrane lipoprotein 900539 5661124 Spea_0725 Shewanella pealeana ATCC 700345 basic membrane lipoprotein YP_001500587.1 899535 D 398579 CDS YP_001500588.1 157960554 5661125 900666..902282 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pin:Ping_1298 ABC transporter ATP-binding protein; ABC transporter-like protein 902282 5661125 Spea_0726 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500588.1 900666 D 398579 CDS YP_001500589.1 157960555 5661126 902279..903409 1 NC_009901.1 PFAM: inner-membrane translocator; KEGG: pin:Ping_1299 ABC transporter inner-membrane translocator; inner-membrane translocator 903409 5661126 Spea_0727 Shewanella pealeana ATCC 700345 inner-membrane translocator YP_001500589.1 902279 D 398579 CDS YP_001500590.1 157960556 5661127 903413..904378 1 NC_009901.1 PFAM: inner-membrane translocator; KEGG: pin:Ping_1300 ABC sugar transporter inner membrane translocator; inner-membrane translocator 904378 5661127 Spea_0728 Shewanella pealeana ATCC 700345 inner-membrane translocator YP_001500590.1 903413 D 398579 CDS YP_001500591.1 157960557 5661128 904899..905315 1 NC_009901.1 hypothetical protein 905315 5661128 Spea_0729 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500591.1 904899 D 398579 CDS YP_001500592.1 157960558 5661129 905386..905985 1 NC_009901.1 KEGG: pol:Bpro_1213 hypothetical protein; hypothetical protein 905985 5661129 Spea_0730 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500592.1 905386 D 398579 CDS YP_001500593.1 157960559 5661130 complement(906550..907539) 1 NC_009901.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 907539 5661130 Spea_0731 Shewanella pealeana ATCC 700345 fructose-1,6-bisphosphatase YP_001500593.1 906550 R 398579 CDS YP_001500594.1 157960560 5661131 907792..910038 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: slo:Shew_0774 peptidase S9B, dipeptidylpeptidase IV domain protein; peptidase S9B dipeptidylpeptidase IV subunit 910038 5661131 Spea_0732 Shewanella pealeana ATCC 700345 peptidase S9B dipeptidylpeptidase IV subunit YP_001500594.1 907792 D 398579 CDS YP_001500595.1 157960561 5661132 complement(910471..911187) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0777 two component transcriptional regulator, winged helix family; two-component response regulator 911187 5661132 Spea_0733 Shewanella pealeana ATCC 700345 two-component response regulator YP_001500595.1 910471 R 398579 CDS YP_001500596.1 157960562 5661133 911749..912105 1 NC_009901.1 KEGG: slo:Shew_0778 hypothetical protein; hypothetical protein 912105 5661133 Spea_0734 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500596.1 911749 D 398579 CDS YP_001500597.1 157960563 5661134 912895..914265 1 NC_009901.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 914265 5661134 Spea_0735 Shewanella pealeana ATCC 700345 aspartate kinase III YP_001500597.1 912895 D 398579 CDS YP_001500598.1 157960564 5661135 914301..915407 1 NC_009901.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: shn:Shewana3_0653 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 915407 5661135 Spea_0736 Shewanella pealeana ATCC 700345 succinylglutamate desuccinylase/aspartoacylase YP_001500598.1 914301 D 398579 CDS YP_001500599.1 157960565 5661136 complement(915685..916146) 1 NC_009901.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 916146 5661136 Spea_0737 Shewanella pealeana ATCC 700345 DNA-binding transcriptional regulator AsnC YP_001500599.1 915685 R 398579 CDS YP_001500600.1 157960566 5661137 complement(916411..917088) 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: shm:Shewmr7_0827 pseudouridylate synthase; pseudouridine synthase 917088 5661137 Spea_0738 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001500600.1 916411 R 398579 CDS YP_001500601.1 157960567 5661138 complement(917202..917492) 1 NC_009901.1 KEGG: sfr:Sfri_0516 hypothetical protein; hypothetical protein 917492 5661138 Spea_0739 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500601.1 917202 R 398579 CDS YP_001500602.1 157960568 5661139 complement(917531..918052) 1 NC_009901.1 PFAM: Tellurite resistance protein TehB; Methyltransferase type 11; Methyltransferase type 12; KEGG: shn:Shewana3_3316 methyltransferase type 12; type 12 methyltransferase 918052 5661139 Spea_0740 Shewanella pealeana ATCC 700345 type 12 methyltransferase YP_001500602.1 917531 R 398579 CDS YP_001500603.1 157960569 5661140 complement(918057..918467) 1 NC_009901.1 KEGG: slo:Shew_0786 hypothetical protein; hypothetical protein 918467 5661140 Spea_0741 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500603.1 918057 R 398579 CDS YP_001500604.1 157960570 5661141 919122..920111 1 NC_009901.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: slo:Shew_0787 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 920111 5661141 Spea_0742 Shewanella pealeana ATCC 700345 D-isomer specific 2-hydroxyacid dehydrogenase YP_001500604.1 919122 D 398579 CDS YP_001500605.1 157960571 5661142 920124..920861 1 NC_009901.1 PFAM: dienelactone hydrolase; KEGG: sfr:Sfri_0519 dienelactone hydrolase; dienelactone hydrolase 920861 5661142 Spea_0743 Shewanella pealeana ATCC 700345 dienelactone hydrolase YP_001500605.1 920124 D 398579 CDS YP_001500606.1 157960572 5661143 complement(920984..921517) 1 NC_009901.1 KEGG: she:Shewmr4_0805 hypothetical protein; hypothetical protein 921517 5661143 Spea_0744 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500606.1 920984 R 398579 CDS YP_001500607.1 157960573 5661144 921814..922557 1 NC_009901.1 KEGG: slo:Shew_0791 spermine synthase; spermine synthase 922557 5661144 Spea_0745 Shewanella pealeana ATCC 700345 spermine synthase YP_001500607.1 921814 D 398579 CDS YP_001500608.1 157960574 5661145 923053..923622 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sfr:Sfri_0522 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 923622 5661145 Spea_0746 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001500608.1 923053 D 398579 CDS YP_001500609.1 157960575 5661146 923915..925489 1 NC_009901.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: slo:Shew_0793 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 925489 5661146 Spea_0747 Shewanella pealeana ATCC 700345 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001500609.1 923915 D 398579 CDS YP_001500610.1 157960576 5661147 925608..926735 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_0794 diguanylate cyclase; diguanylate cyclase 926735 5661147 Spea_0748 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001500610.1 925608 D 398579 CDS YP_001500611.1 157960577 5661148 complement(926794..926991) 1 NC_009901.1 KEGG: slo:Shew_0796 hypothetical protein; hypothetical protein 926991 5661148 Spea_0749 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500611.1 926794 R 398579 CDS YP_001500612.1 157960578 5661149 complement(927428..928855) 1 NC_009901.1 KEGG: slo:Shew_0797 hypothetical protein; hypothetical protein 928855 5661149 Spea_0750 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500612.1 927428 R 398579 CDS YP_001500613.1 157960579 5661150 complement(929175..929591) 1 NC_009901.1 KEGG: slo:Shew_0798 hypothetical protein; hypothetical protein 929591 5661150 Spea_0751 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500613.1 929175 R 398579 CDS YP_001500614.1 157960580 5661151 930076..931251 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: spc:Sputcn32_3055 FAD dependent oxidoreductase; FAD dependent oxidoreductase 931251 5661151 Spea_0752 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001500614.1 930076 D 398579 CDS YP_001500615.1 157960581 5661152 931409..932596 1 NC_009901.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: sdn:Sden_3160 chromate transporter; chromate transporter 932596 5661152 Spea_0753 Shewanella pealeana ATCC 700345 chromate transporter YP_001500615.1 931409 D 398579 CDS YP_001500616.1 157960582 5661153 complement(932673..936995) 1 NC_009901.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: slo:Shew_0809 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 936995 5661153 Spea_0754 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit alpha YP_001500616.1 932673 R 398579 CDS YP_001500617.1 157960583 5661154 complement(937293..938285) 1 NC_009901.1 PFAM: pentapeptide repeat protein; Ion transport 2 domain protein; KEGG: slo:Shew_0810 ion transport 2 domain protein; Ion transport 2 domain-containing protein 938285 5661154 Spea_0755 Shewanella pealeana ATCC 700345 Ion transport 2 domain-containing protein YP_001500617.1 937293 R 398579 CDS YP_001500618.1 157960584 5661155 938835..939716 1 NC_009901.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: slo:Shew_0811 peptide chain release factor 2; peptide chain release factor 2 939716 5661155 Spea_0756 Shewanella pealeana ATCC 700345 peptide chain release factor 2 YP_001500618.1 938835 D 398579 CDS YP_001500619.1 157960585 5661156 939729..941234 1 NC_009901.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 941234 lysS 5661156 lysS Shewanella pealeana ATCC 700345 lysyl-tRNA synthetase YP_001500619.1 939729 D 398579 CDS YP_001500620.1 157960586 5661157 941881..944400 1 NC_009901.1 KEGG: slo:Shew_0813 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 944400 5661157 Spea_0758 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001500620.1 941881 D 398579 CDS YP_001500621.1 157960587 5661158 complement(944422..945015) 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: cps:CPS_1154 RNA pseudouridine synthase family protein; pseudouridine synthase 945015 5661158 Spea_0759 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001500621.1 944422 R 398579 CDS YP_001500622.1 157960588 5661159 945297..946088 1 NC_009901.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: slo:Shew_0815 glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 946088 5661159 Spea_0760 Shewanella pealeana ATCC 700345 glucosamine-6-phosphate isomerase YP_001500622.1 945297 D 398579 CDS YP_001500623.1 157960589 5661160 946690..947232 1 NC_009901.1 KEGG: sfr:Sfri_3542 hypothetical protein; hypothetical protein 947232 5661160 Spea_0761 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500623.1 946690 D 398579 CDS YP_001500624.1 157960590 5661161 947312..947983 1 NC_009901.1 PFAM: nitroreductase; KEGG: sfr:Sfri_3203 nitroreductase; nitroreductase 947983 5661161 Spea_0762 Shewanella pealeana ATCC 700345 nitroreductase YP_001500624.1 947312 D 398579 CDS YP_001500625.1 157960591 5661162 948023..948340 1 NC_009901.1 KEGG: mbu:Mbur_1476 cupin family protein; cupin family protein 948340 5661162 Spea_0763 Shewanella pealeana ATCC 700345 cupin family protein YP_001500625.1 948023 D 398579 CDS YP_001500626.1 157960592 5661163 948489..950438 1 NC_009901.1 PFAM: peptidase U32; KEGG: shm:Shewmr7_0828 peptidase U32; peptidase U32 950438 5661163 Spea_0764 Shewanella pealeana ATCC 700345 peptidase U32 YP_001500626.1 948489 D 398579 CDS YP_001500627.1 157960593 5661164 950515..950889 1 NC_009901.1 PFAM: protein of unknown function DUF1696; KEGG: slo:Shew_0819 protein of unknown function DUF1696; hypothetical protein 950889 5661164 Spea_0765 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500627.1 950515 D 398579 CDS YP_001500628.1 157960594 5661165 complement(951008..951454) 1 NC_009901.1 PFAM: Fe-S metabolism associated SufE; KEGG: shn:Shewana3_0807 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 951454 5661165 Spea_0766 Shewanella pealeana ATCC 700345 Fe-S metabolism associated SufE YP_001500628.1 951008 R 398579 CDS YP_001500629.1 157960595 5661166 complement(951760..952971) 1 NC_009901.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: son:SO_3789 aminotransferase, class V; SufS subfamily cysteine desulfurase 952971 5661166 Spea_0767 Shewanella pealeana ATCC 700345 SufS subfamily cysteine desulfurase YP_001500629.1 951760 R 398579 CDS YP_001500630.1 157960596 5661167 complement(953172..954215) 1 NC_009901.1 PFAM: aldo/keto reductase; KEGG: slo:Shew_0736 aldo/keto reductase; aldo/keto reductase 954215 5661167 Spea_0768 Shewanella pealeana ATCC 700345 aldo/keto reductase YP_001500630.1 953172 R 398579 CDS YP_001500631.1 157960597 5661168 complement(954341..955282) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: slo:Shew_0737 transcriptional regulator, MarR family with acetyltransferase activity; MarR family transcriptional regulator 955282 5661168 Spea_0769 Shewanella pealeana ATCC 700345 MarR family transcriptional regulator YP_001500631.1 954341 R 398579 CDS YP_001500632.1 157960598 5661169 complement(955376..955915) 1 NC_009901.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 955915 5661169 Spea_0770 Shewanella pealeana ATCC 700345 NTPase YP_001500632.1 955376 R 398579 CDS YP_001500633.1 157960599 5661170 956473..957759 1 NC_009901.1 PFAM: aromatic amino acid permease; KEGG: sbm:Shew185_3552 aromatic amino acid permease; aromatic amino acid permease 957759 5661170 Spea_0771 Shewanella pealeana ATCC 700345 aromatic amino acid permease YP_001500633.1 956473 D 398579 CDS YP_001500634.1 157960600 5661171 957934..959301 1 NC_009901.1 KEGG: slo:Shew_0740 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 959301 5661171 Spea_0772 Shewanella pealeana ATCC 700345 L-serine dehydratase 1 YP_001500634.1 957934 D 398579 CDS YP_001500635.1 157960601 5661172 complement(959385..959828) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_0762 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 959828 5661172 Spea_0773 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500635.1 959385 R 398579 CDS YP_001500636.1 157960602 5661173 959968..960258 1 NC_009901.1 KEGG: sbm:Shew185_3550 hypothetical protein; hypothetical protein 960258 5661173 Spea_0774 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500636.1 959968 D 398579 CDS YP_001500637.1 157960603 5661174 960429..961727 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: slo:Shew_0743 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 961727 5661174 Spea_0775 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001500637.1 960429 D 398579 CDS YP_001500638.1 157960604 5661175 complement(962027..962440) 1 NC_009901.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sbl:Sbal_0769 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 962440 5661175 Spea_0776 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500638.1 962027 R 398579 CDS YP_001500639.1 157960605 5661176 962519..962728 1 NC_009901.1 KEGG: she:Shewmr4_0766 hypothetical protein; hypothetical protein 962728 5661176 Spea_0777 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500639.1 962519 D 398579 CDS YP_001500640.1 157960606 5661177 complement(962918..963865) 1 NC_009901.1 PFAM: GGDEF domain containing protein; KEGG: slo:Shew_0746 diguanylate cyclase; diguanylate cyclase 963865 5661177 Spea_0778 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001500640.1 962918 R 398579 CDS YP_001500641.1 157960607 5661178 964148..964705 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbm:Shew185_3545 acetyltransferase, GNAT family; N-acetyltransferase GCN5 964705 5661178 Spea_0779 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500641.1 964148 D 398579 CDS YP_001500642.1 157960608 5661179 964714..965064 1 NC_009901.1 KEGG: sfr:Sfri_0644 hypothetical protein; hypothetical protein 965064 5661179 Spea_0780 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500642.1 964714 D 398579 CDS YP_001500643.1 157960609 5661180 complement(965349..965885) 1 NC_009901.1 KEGG: shn:Shewana3_0553 hypothetical protein; hypothetical protein 965885 5661180 Spea_0781 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500643.1 965349 R 398579 CDS YP_001500644.1 157960610 5661181 966376..967074 1 NC_009901.1 KEGG: mmw:Mmwyl1_2727 hypothetical protein; hypothetical protein 967074 5661181 Spea_0782 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500644.1 966376 D 398579 CDS YP_001500645.1 157960611 5661182 complement(967539..968558) 1 NC_009901.1 hypothetical protein 968558 5661182 Spea_0783 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500645.1 967539 R 398579 CDS YP_001500646.1 157960612 5661183 969568..970395 1 NC_009901.1 KEGG: slo:Shew_3061 hypothetical protein; hypothetical protein 970395 5661183 Spea_0784 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500646.1 969568 D 398579 CDS YP_001500647.1 157960613 5661184 970701..971528 1 NC_009901.1 KEGG: slo:Shew_3061 hypothetical protein; hypothetical protein 971528 5661184 Spea_0785 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500647.1 970701 D 398579 CDS YP_001500648.1 157960614 5661185 complement(971651..972124) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sfr:Sfri_0645 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 972124 5661185 Spea_0786 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500648.1 971651 R 398579 CDS YP_001500649.1 157960615 5661186 complement(972502..973656) 1 NC_009901.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 973656 5661186 Spea_0787 Shewanella pealeana ATCC 700345 S-adenosylmethionine synthetase YP_001500649.1 972502 R 398579 CDS YP_001500650.1 157960616 5661187 974163..976154 1 NC_009901.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 976154 5661187 Spea_0788 Shewanella pealeana ATCC 700345 transketolase YP_001500650.1 974163 D 398579 CDS YP_001500651.1 157960617 5661188 976253..977272 1 NC_009901.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 977272 5661188 Spea_0789 Shewanella pealeana ATCC 700345 erythrose 4-phosphate dehydrogenase YP_001500651.1 976253 D 398579 CDS YP_001500652.1 157960618 5661189 977642..978817 1 NC_009901.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 978817 pgk 5661189 pgk Shewanella pealeana ATCC 700345 phosphoglycerate kinase YP_001500652.1 977642 D 398579 CDS YP_001500653.1 157960619 5661190 979126..980190 1 NC_009901.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 980190 5661190 Spea_0791 Shewanella pealeana ATCC 700345 fructose-1,6-bisphosphate aldolase YP_001500653.1 979126 D 398579 CDS YP_001500654.1 157960620 5661191 980408..981148 1 NC_009901.1 PFAM: protein of unknown function DUF481; KEGG: slo:Shew_0756 protein of unknown function DUF481; hypothetical protein 981148 5661191 Spea_0792 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500654.1 980408 D 398579 CDS YP_001500655.1 157960621 5661192 981469..982215 1 NC_009901.1 KEGG: sbm:Shew185_3534 transcriptional regulator, CadC; putative transcriptional regulator CadC 982215 5661192 Spea_0793 Shewanella pealeana ATCC 700345 putative transcriptional regulator CadC YP_001500655.1 981469 D 398579 CDS YP_001500656.1 157960622 5661193 982334..982738 1 NC_009901.1 hypothetical protein 982738 5661193 Spea_0794 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500656.1 982334 D 398579 CDS YP_001500657.1 157960623 5661194 982985..984418 1 NC_009901.1 KEGG: slo:Shew_0762 hypothetical protein; hypothetical protein 984418 5661194 Spea_0795 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500657.1 982985 D 398579 CDS YP_001500658.1 157960624 5661195 complement(984632..986851) 1 NC_009901.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; KEGG: slo:Shew_0763 putative PAS/PAC sensor protein; putative diguanylate cyclase 986851 5661195 Spea_0796 Shewanella pealeana ATCC 700345 putative diguanylate cyclase YP_001500658.1 984632 R 398579 CDS YP_001500659.1 157960625 5661196 complement(986977..987585) 1 NC_009901.1 PFAM: Radical SAM domain protein; KEGG: slo:Shew_0764 radical SAM domain protein; radical SAM domain-containing protein 987585 5661196 Spea_0797 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001500659.1 986977 R 398579 CDS YP_001500660.1 157960626 5661197 987772..988155 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 988155 5661197 Spea_0798 Shewanella pealeana ATCC 700345 transposase YP_001500660.1 987772 D 398579 CDS YP_001500661.1 157960627 5661198 988272..989000 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 989000 5661198 Spea_0799 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001500661.1 988272 D 398579 CDS YP_001500662.1 157960628 5661199 complement(989039..992185) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_0838 acriflavin resistance protein; acriflavin resistance protein 992185 5661199 Spea_0800 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001500662.1 989039 R 398579 CDS YP_001500663.1 157960629 5661200 complement(992185..993444) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shn:Shewana3_3337 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 993444 5661200 Spea_0801 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001500663.1 992185 R 398579 CDS YP_001500664.1 157960630 5661201 complement(993624..994859) 1 NC_009901.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 994859 5661201 Spea_0802 Shewanella pealeana ATCC 700345 ATP-dependent RNA helicase SrmB YP_001500664.1 993624 R 398579 CDS YP_001500665.1 157960631 5661202 complement(994929..995723) 1 NC_009901.1 KEGG: slo:Shew_0768 methyltransferase small; methyltransferase small 995723 5661202 Spea_0803 Shewanella pealeana ATCC 700345 methyltransferase small YP_001500665.1 994929 R 398579 CDS YP_001500666.1 157960632 5661203 996241..997587 1 NC_009901.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: slo:Shew_0769 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 997587 5661203 Spea_0804 Shewanella pealeana ATCC 700345 branched-chain amino acid transport system II carrier protein YP_001500666.1 996241 D 398579 CDS YP_001500667.1 157960633 5661204 998105..999007 1 NC_009901.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sbm:Shew185_3524 tyrosine recombinase XerD; tyrosine recombinase XerD 999007 5661204 Spea_0805 Shewanella pealeana ATCC 700345 tyrosine recombinase XerD YP_001500667.1 998105 D 398579 CDS YP_001500668.1 157960634 5661205 999232..999957 1 NC_009901.1 KEGG: son:SO_0951 thiol:disulfide interchange protein DsbC; thiol:disulfide interchange protein DsbC 999957 5661205 Spea_0806 Shewanella pealeana ATCC 700345 thiol:disulfide interchange protein DsbC YP_001500668.1 999232 D 398579 CDS YP_001500669.1 157960635 5661206 1000125..1001849 1 NC_009901.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: slo:Shew_0772 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1001849 5661206 Spea_0807 Shewanella pealeana ATCC 700345 single-stranded-DNA-specific exonuclease RecJ YP_001500669.1 1000125 D 398579 CDS YP_001500670.1 157960636 5661207 complement(1002397..1002876) 1 NC_009901.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: ppr:PBPRA0970 putative transcriptional regulator, AsnC family; AsnC family transcriptional regulator 1002876 5661207 Spea_0808 Shewanella pealeana ATCC 700345 AsnC family transcriptional regulator YP_001500670.1 1002397 R 398579 CDS YP_001500671.1 157960637 5661208 1003095..1004396 1 NC_009901.1 PFAM: protein of unknown function DUF1063; KEGG: ppr:PBPRB0240 hypothetical inner membrane protein; hypothetical protein 1004396 5661208 Spea_0809 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500671.1 1003095 D 398579 CDS YP_001500672.1 157960638 5661209 1005284..1006612 1 NC_009901.1 KEGG: vfi:VF0643 serine transporter; serine transporter 1006612 5661209 Spea_0810 Shewanella pealeana ATCC 700345 serine transporter YP_001500672.1 1005284 D 398579 CDS YP_001500673.1 157960639 5661210 1007342..1008724 1 NC_009901.1 KEGG: rco:RC0850 hypothetical protein; hypothetical protein 1008724 5661210 Spea_0811 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500673.1 1007342 D 398579 CDS YP_001500674.1 157960640 5661211 1008854..1009267 1 NC_009901.1 PFAM: NUDIX hydrolase; KEGG: ppr:PBPRB0736 hypothetical protein; NUDIX hydrolase 1009267 5661211 Spea_0812 Shewanella pealeana ATCC 700345 NUDIX hydrolase YP_001500674.1 1008854 D 398579 CDS YP_001500675.1 157960641 5661212 complement(1009716..1011041) 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: bba:Bd0322 D-amino acid dehydrogenase; FAD dependent oxidoreductase 1011041 5661212 Spea_0813 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001500675.1 1009716 R 398579 CDS YP_001500676.1 157960642 5661213 complement(1011167..1012198) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: ppr:PBPRB1132 putative transcriptional regulator; AraC family transcriptional regulator 1012198 5661213 Spea_0814 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001500676.1 1011167 R 398579 CDS YP_001500677.1 157960643 5661214 1012326..1012940 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ppu:PP_3565 transporter, LysE family; lysine exporter protein LysE/YggA 1012940 5661214 Spea_0815 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001500677.1 1012326 D 398579 CDS YP_001500678.1 157960644 5661215 complement(1013154..1013813) 1 NC_009901.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1013813 5661215 Spea_0816 Shewanella pealeana ATCC 700345 ribose-5-phosphate isomerase A YP_001500678.1 1013154 R 398579 CDS YP_001500679.1 157960645 5661216 1014119..1015063 1 NC_009901.1 PFAM: protein of unknown function DUF808; KEGG: shm:Shewmr7_1013 protein of unknown function DUF808; hypothetical protein 1015063 5661216 Spea_0817 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500679.1 1014119 D 398579 CDS YP_001500680.1 157960646 5661217 1015117..1016256 1 NC_009901.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: pha:PSHAa1702 hypothetical protein; endonuclease/exonuclease/phosphatase 1016256 5661217 Spea_0818 Shewanella pealeana ATCC 700345 endonuclease/exonuclease/phosphatase YP_001500680.1 1015117 D 398579 CDS YP_001500681.1 157960647 5661218 complement(1016282..1016761) 1 NC_009901.1 PFAM: MORN variant repeat protein; KEGG: fnu:FN0738 hypothetical exported 24-amino acid repeat protein; MORN repeat-containing protein 1016761 5661218 Spea_0819 Shewanella pealeana ATCC 700345 MORN repeat-containing protein YP_001500681.1 1016282 R 398579 CDS YP_001500682.1 157960648 5661219 1016981..1018750 1 NC_009901.1 KEGG: shn:Shewana3_3482 alkaline phosphatase; alkaline phosphatase 1018750 5661219 Spea_0820 Shewanella pealeana ATCC 700345 alkaline phosphatase YP_001500682.1 1016981 D 398579 CDS YP_001500683.1 157960649 5661220 1019275..1019835 1 NC_009901.1 PFAM: phosphoribosyltransferase; KEGG: slo:Shew_0833 hypoxanthine-guanine phosphoribosyltransferase; phosphoribosyltransferase 1019835 5661220 Spea_0821 Shewanella pealeana ATCC 700345 phosphoribosyltransferase YP_001500683.1 1019275 D 398579 CDS YP_001500684.1 157960650 5661221 complement(1020216..1020428) 1 NC_009901.1 KEGG: slo:Shew_0834 hypothetical protein; hypothetical protein 1020428 5661221 Spea_0822 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500684.1 1020216 R 398579 CDS YP_001500685.1 157960651 5661222 complement(1020859..1023528) 1 NC_009901.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: son:SO_1059 aminopeptidase N; aminopeptidase N 1023528 5661222 Spea_0823 Shewanella pealeana ATCC 700345 aminopeptidase N YP_001500685.1 1020859 R 398579 CDS YP_001500686.1 157960652 5661223 complement(1023747..1024352) 1 NC_009901.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: shn:Shewana3_0898 conserved hypothetical protein; membrane lipoprotein lipid attachment site 1024352 5661223 Spea_0824 Shewanella pealeana ATCC 700345 membrane lipoprotein lipid attachment site YP_001500686.1 1023747 R 398579 CDS YP_001500687.1 157960653 5661224 complement(1024364..1025731) 1 NC_009901.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO_1061 TPR domain protein; hypothetical protein 1025731 5661224 Spea_0825 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500687.1 1024364 R 398579 CDS YP_001500688.1 157960654 5661225 complement(1026006..1026218) 1 NC_009901.1 PFAM: SlyX family protein; KEGG: slo:Shew_0838 SlyX family protein; SlyX family protein 1026218 5661225 Spea_0826 Shewanella pealeana ATCC 700345 SlyX family protein YP_001500688.1 1026006 R 398579 CDS YP_001500689.1 157960655 5661226 1026670..1027437 1 NC_009901.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_0840 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 1027437 5661226 Spea_0827 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001500689.1 1026670 D 398579 CDS YP_001500690.1 157960656 5661227 1027702..1028073 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0841 uncharacterized conserved protein UCP006287; hypothetical protein 1028073 5661227 Spea_0828 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500690.1 1027702 D 398579 CDS YP_001500691.1 157960657 5661228 complement(1028155..1028784) 1 NC_009901.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: slo:Shew_0842 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 1028784 5661228 Spea_0829 Shewanella pealeana ATCC 700345 two component LuxR family transcriptional regulator YP_001500691.1 1028155 R 398579 CDS YP_001500692.1 157960658 5661229 complement(1028876..1030588) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: slo:Shew_0843 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; nitrate/nitrite sensor protein NarQ 1030588 5661229 Spea_0830 Shewanella pealeana ATCC 700345 nitrate/nitrite sensor protein NarQ YP_001500692.1 1028876 R 398579 CDS YP_001500693.1 157960659 5661230 1030831..1032234 1 NC_009901.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 1032234 nrfA 5661230 nrfA Shewanella pealeana ATCC 700345 cytochrome c552 YP_001500693.1 1030831 D 398579 CDS YP_001500694.1 157960660 5661231 complement(1032804..1033346) 1 NC_009901.1 PFAM: isochorismatase hydrolase; KEGG: shw:Sputw3181_0699 isochorismatase hydrolase; isochorismatase hydrolase 1033346 5661231 Spea_0832 Shewanella pealeana ATCC 700345 isochorismatase hydrolase YP_001500694.1 1032804 R 398579 CDS YP_001500695.1 157960661 5661232 1033605..1033943 1 NC_009901.1 PFAM: nitrogen regulatory protein P-II; KEGG: sfr:Sfri_0623 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1033943 5661232 Spea_0833 Shewanella pealeana ATCC 700345 nitrogen regulatory protein P-II YP_001500695.1 1033605 D 398579 CDS YP_001500696.1 157960662 5661233 1033956..1035206 1 NC_009901.1 PFAM: Rh family protein/ammonium transporter; KEGG: sfr:Sfri_0624 Rh family protein/ammonium transporter; Rh family protein/ammonium transporter 1035206 5661233 Spea_0834 Shewanella pealeana ATCC 700345 Rh family protein/ammonium transporter YP_001500696.1 1033956 D 398579 CDS YP_001500697.1 157960663 5661234 1035491..1035826 1 NC_009901.1 KEGG: saz:Sama_0652 hypothetical protein; hypothetical protein 1035826 5661234 Spea_0835 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500697.1 1035491 D 398579 CDS YP_001500698.1 157960664 5661235 1035910..1037121 1 NC_009901.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: slo:Shew_0849 TPR repeat-containing protein; hypothetical protein 1037121 5661235 Spea_0836 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500698.1 1035910 D 398579 CDS YP_001500699.1 157960665 5661236 1037516..1038571 1 NC_009901.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1038571 5661236 Spea_0837 Shewanella pealeana ATCC 700345 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001500699.1 1037516 D 398579 CDS YP_001500700.1 157960666 5661237 complement(1038648..1038764) 1 NC_009901.1 KEGG: slo:Shew_0852 hypothetical protein; hypothetical protein 1038764 5661237 Spea_0838 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500700.1 1038648 R 398579 CDS YP_001500701.1 157960667 5661238 1039157..1040929 1 NC_009901.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sfr:Sfri_0630 ABC transporter related; ABC transporter-like protein 1040929 5661238 Spea_0839 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500701.1 1039157 D 398579 CDS YP_001500702.1 157960668 5661239 1041058..1041321 1 NC_009901.1 KEGG: slo:Shew_0854 hypothetical protein; hypothetical protein 1041321 5661239 Spea_0840 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500702.1 1041058 D 398579 CDS YP_001500703.1 157960669 5661240 complement(1041366..1041497) 1 NC_009901.1 KEGG: son:SO_0752 hypothetical protein; hypothetical protein 1041497 5661240 Spea_0841 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500703.1 1041366 R 398579 CDS YP_001500704.1 157960670 5661241 complement(1041597..1042190) 1 NC_009901.1 PFAM: Phosphoglycerate mutase; KEGG: she:Shewmr4_3352 phosphoglycerate mutase; phosphoglycerate mutase 1042190 5661241 Spea_0842 Shewanella pealeana ATCC 700345 phosphoglycerate mutase YP_001500704.1 1041597 R 398579 CDS YP_001500705.1 157960671 5661242 1042307..1043056 1 NC_009901.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: shw:Sputw3181_0711 oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD/NAD(P)-binding subunit 1043056 5661242 Spea_0843 Shewanella pealeana ATCC 700345 oxidoreductase FAD/NAD(P)-binding subunit YP_001500705.1 1042307 D 398579 CDS YP_001500706.1 157960672 5661243 1043372..1044379 1 NC_009901.1 PFAM: extracellular solute-binding protein family 1; KEGG: slo:Shew_0861 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1044379 5661243 Spea_0844 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001500706.1 1043372 D 398579 CDS YP_001500707.1 157960673 5661244 1044554..1046185 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfr:Sfri_0637 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1046185 5661244 Spea_0845 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001500707.1 1044554 D 398579 CDS YP_001500708.1 157960674 5661245 1046187..1047215 1 NC_009901.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sbl:Sbal_0603 ABC transporter related; ABC transporter-like protein 1047215 5661245 Spea_0846 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001500708.1 1046187 D 398579 CDS YP_001500709.1 157960675 5661246 1047424..1048359 1 NC_009901.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: slo:Shew_0864 Dyp-type peroxidase family; Dyp-type peroxidase family protein 1048359 5661246 Spea_0847 Shewanella pealeana ATCC 700345 Dyp-type peroxidase family protein YP_001500709.1 1047424 D 398579 CDS YP_001500710.1 157960676 5661247 complement(1048431..1048895) 1 NC_009901.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: slo:Shew_0865 cupin 2, conserved barrel domain protein; cupin 1048895 5661247 Spea_0848 Shewanella pealeana ATCC 700345 cupin YP_001500710.1 1048431 R 398579 CDS YP_001500711.1 157960677 5661248 complement(1049159..1049629) 1 NC_009901.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 1049629 5661248 Spea_0849 Shewanella pealeana ATCC 700345 arginine repressor YP_001500711.1 1049159 R 398579 CDS YP_001500712.1 157960678 5661249 1049981..1050916 1 NC_009901.1 oxidizes malate to oxaloacetate; malate dehydrogenase 1050916 5661249 Spea_0850 Shewanella pealeana ATCC 700345 malate dehydrogenase YP_001500712.1 1049981 D 398579 CDS YP_001500713.1 157960679 5661250 complement(1050985..1051956) 1 NC_009901.1 PFAM: Polyprenyl synthetase; KEGG: slo:Shew_0868 trans-hexaprenyltranstransferase; polyprenyl synthetase 1051956 5661250 Spea_0851 Shewanella pealeana ATCC 700345 polyprenyl synthetase YP_001500713.1 1050985 R 398579 CDS YP_001500714.1 157960680 5661251 1052239..1052550 1 NC_009901.1 PFAM: ribosomal protein L21; KEGG: slo:Shew_0869 ribosomal protein L21; 50S ribosomal protein L21 1052550 rplU 5661251 rplU Shewanella pealeana ATCC 700345 50S ribosomal protein L21 YP_001500714.1 1052239 D 398579 CDS YP_001500715.1 157960681 5661252 1052566..1052820 1 NC_009901.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1052820 rpmA 5661252 rpmA Shewanella pealeana ATCC 700345 50S ribosomal protein L27 YP_001500715.1 1052566 D 398579 CDS YP_001500716.1 157960682 5661253 1052958..1054121 1 NC_009901.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1054121 obgE 5661253 obgE Shewanella pealeana ATCC 700345 GTPase ObgE YP_001500716.1 1052958 D 398579 CDS YP_001500717.1 157960683 5661254 1054151..1054909 1 NC_009901.1 PFAM: protein of unknown function DUF1212; KEGG: slo:Shew_0872 protein of unknown function DUF1212; hypothetical protein 1054909 5661254 Spea_0855 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500717.1 1054151 D 398579 CDS YP_001500718.1 157960684 5661255 1054909..1055382 1 NC_009901.1 KEGG: sbm:Shew185_1040 hypothetical protein; hypothetical protein 1055382 5661255 Spea_0856 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500718.1 1054909 D 398579 CDS YP_001500719.1 157960685 5661256 1055458..1055940 1 NC_009901.1 PFAM: dihydrofolate reductase region; KEGG: shm:Shewmr7_3120 dihydrofolate reductase; dihydrofolate reductase 1055940 5661256 Spea_0857 Shewanella pealeana ATCC 700345 dihydrofolate reductase YP_001500719.1 1055458 D 398579 CDS YP_001500720.1 157960686 5661257 1056037..1056432 1 NC_009901.1 KEGG: saz:Sama_2823 hypothetical protein; hypothetical protein 1056432 5661257 Spea_0858 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500720.1 1056037 D 398579 CDS YP_001500721.1 157960687 5661258 complement(1056566..1058587) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_0876 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1058587 5661258 Spea_0859 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001500721.1 1056566 R 398579 CDS YP_001500722.1 157960688 5661259 complement(1058690..1059523) 1 NC_009901.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1059523 apaH 5661259 apaH Shewanella pealeana ATCC 700345 diadenosine tetraphosphatase YP_001500722.1 1058690 R 398579 CDS YP_001500723.1 157960689 5661260 complement(1059593..1059973) 1 NC_009901.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 1059973 apaG 5661260 apaG Shewanella pealeana ATCC 700345 ApaG protein YP_001500723.1 1059593 R 398579 CDS YP_001500724.1 157960690 5661261 complement(1060129..1060932) 1 NC_009901.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1060932 ksgA 5661261 ksgA Shewanella pealeana ATCC 700345 dimethyladenosine transferase YP_001500724.1 1060129 R 398579 CDS YP_001500725.1 157960691 5661262 complement(1060949..1061932) 1 NC_009901.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1061932 pdxA 5661262 pdxA Shewanella pealeana ATCC 700345 4-hydroxythreonine-4-phosphate dehydrogenase YP_001500725.1 1060949 R 398579 CDS YP_001500726.1 157960692 5661263 complement(1061938..1063242) 1 NC_009901.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: she:Shewmr4_0907 PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain-containing protein 1063242 5661263 Spea_0864 Shewanella pealeana ATCC 700345 SurA domain-containing protein YP_001500726.1 1061938 R 398579 CDS YP_001500727.1 157960693 5661264 complement(1063370..1065694) 1 NC_009901.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: slo:Shew_0882 organic solvent tolerance protein; organic solvent tolerance protein 1065694 5661264 Spea_0865 Shewanella pealeana ATCC 700345 organic solvent tolerance protein YP_001500727.1 1063370 R 398579 CDS YP_001500728.1 157960694 5661265 1065844..1066890 1 NC_009901.1 PFAM: aminoglycoside phosphotransferase; KEGG: shm:Shewmr7_3111 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1066890 5661265 Spea_0866 Shewanella pealeana ATCC 700345 aminoglycoside phosphotransferase YP_001500728.1 1065844 D 398579 CDS YP_001500729.1 157960695 5661266 1066891..1067559 1 NC_009901.1 PFAM: Nucleotidyl transferase; KEGG: shn:Shewana3_3204 nucleotidyl transferase; nucleotidyl transferase 1067559 5661266 Spea_0867 Shewanella pealeana ATCC 700345 nucleotidyl transferase YP_001500729.1 1066891 D 398579 CDS YP_001500730.1 157960696 5661267 1067559..1068338 1 NC_009901.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 1068338 djlA 5661267 djlA Shewanella pealeana ATCC 700345 Dna-J like membrane chaperone protein YP_001500730.1 1067559 D 398579 CDS YP_001500731.1 157960697 5661268 1068393..1069004 1 NC_009901.1 KEGG: slo:Shew_0886 hypothetical protein; hypothetical protein 1069004 5661268 Spea_0869 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500731.1 1068393 D 398579 CDS YP_001500732.1 157960698 5661269 1069095..1070048 1 NC_009901.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: shm:Shewmr7_3107 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein; D-isomer specific 2-hydroxyacid dehydrogenase 1070048 5661269 Spea_0870 Shewanella pealeana ATCC 700345 D-isomer specific 2-hydroxyacid dehydrogenase YP_001500732.1 1069095 D 398579 CDS YP_001500733.1 157960699 5661270 complement(1070160..1071335) 1 NC_009901.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1071335 purT 5661270 purT Shewanella pealeana ATCC 700345 phosphoribosylglycinamide formyltransferase 2 YP_001500733.1 1070160 R 398579 CDS YP_001500734.1 157960700 5661271 1071648..1072067 1 NC_009901.1 KEGG: slo:Shew_0889 hypothetical protein; hypothetical protein 1072067 5661271 Spea_0872 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500734.1 1071648 D 398579 CDS YP_001500735.1 157960701 5661272 1072069..1073205 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_0890 secretion protein HlyD family protein; secretion protein HlyD family protein 1073205 5661272 Spea_0873 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001500735.1 1072069 D 398579 CDS YP_001500736.1 157960702 5661273 1073338..1074813 1 NC_009901.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: slo:Shew_0892 AAA ATPase, central domain protein; ATPase central domain-containing protein 1074813 5661273 Spea_0874 Shewanella pealeana ATCC 700345 ATPase central domain-containing protein YP_001500736.1 1073338 D 398579 CDS YP_001500737.1 157960703 5661274 complement(1074920..1075474) 1 NC_009901.1 KEGG: she:Shewmr4_3009 hypothetical protein; hypothetical protein 1075474 5661274 Spea_0875 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500737.1 1074920 R 398579 CDS YP_001500738.1 157960704 5661275 1075600..1075911 1 NC_009901.1 PFAM: protein of unknown function DUF1289; KEGG: slo:Shew_0894 protein of unknown function DUF1289; hypothetical protein 1075911 5661275 Spea_0876 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500738.1 1075600 D 398579 CDS YP_001500739.1 157960705 5661276 complement(1075908..1077176) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: shm:Shewmr7_3088 periplasmic sensor signal transduction histidine kinase; histidine kinase 1077176 5661276 Spea_0877 Shewanella pealeana ATCC 700345 histidine kinase YP_001500739.1 1075908 R 398579 CDS YP_001500740.1 157960706 5661277 complement(1077195..1077908) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0896 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1077908 5661277 Spea_0878 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001500740.1 1077195 R 398579 CDS YP_001500741.1 157960707 5661278 complement(1077908..1078291) 1 NC_009901.1 KEGG: slo:Shew_0897 hypothetical protein; hypothetical protein 1078291 5661278 Spea_0879 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500741.1 1077908 R 398579 CDS YP_001500742.1 157960708 5661279 complement(1078329..1079204) 1 NC_009901.1 PFAM: MltA-interacting MipA family protein; KEGG: slo:Shew_0898 MltA-interacting MipA family protein; MltA-interacting MipA family protein 1079204 5661279 Spea_0880 Shewanella pealeana ATCC 700345 MltA-interacting MipA family protein YP_001500742.1 1078329 R 398579 CDS YP_001500743.1 157960709 5661280 1079454..1079990 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: saz:Sama_2792 conserved hypothetical acetyltransferase; N-acetyltransferase GCN5 1079990 5661280 Spea_0881 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500743.1 1079454 D 398579 CDS YP_001500744.1 157960710 5661281 complement(1079987..1080472) 1 NC_009901.1 KEGG: shm:Shewmr7_3082 hypothetical protein; hypothetical protein 1080472 5661281 Spea_0882 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500744.1 1079987 R 398579 CDS YP_001500745.1 157960711 5661282 1080611..1080946 1 NC_009901.1 PFAM: Protein of unknown function DUF1971; KEGG: sbm:Shew185_1077 protein of unknown function DUF1971; hypothetical protein 1080946 5661282 Spea_0883 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500745.1 1080611 D 398579 CDS YP_001500746.1 157960712 5661283 complement(1081000..1081884) 1 NC_009901.1 KEGG: shm:Shewmr7_1169 UspA domain protein; UspA domain-containing protein 1081884 5661283 Spea_0884 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001500746.1 1081000 R 398579 CDS YP_001500747.1 157960713 5661284 1082858..1083610 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sfr:Sfri_2218 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1083610 5661284 Spea_0885 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001500747.1 1082858 D 398579 CDS YP_001500748.1 157960714 5661285 complement(1083664..1084083) 1 NC_009901.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: slo:Shew_0913 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1084083 5661285 Spea_0886 Shewanella pealeana ATCC 700345 glyoxalase/bleomycin resistance protein/dioxygenase YP_001500748.1 1083664 R 398579 CDS YP_001500749.1 157960715 5661286 complement(1084127..1084735) 1 NC_009901.1 PFAM: NADPH-dependent FMN reductase; KEGG: slo:Shew_0914 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1084735 5661286 Spea_0887 Shewanella pealeana ATCC 700345 NADPH-dependent FMN reductase YP_001500749.1 1084127 R 398579 CDS YP_001500750.1 157960716 5661287 1084885..1085520 1 NC_009901.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: sbl:Sbal_1011 putative transcriptional regulator; putative transcriptional regulator 1085520 5661287 Spea_0888 Shewanella pealeana ATCC 700345 putative transcriptional regulator YP_001500750.1 1084885 D 398579 CDS YP_001500751.1 157960717 5661288 1085524..1086228 1 NC_009901.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: shw:Sputw3181_3146 pseudouridine synthase; pseudouridine synthase 1086228 5661288 Spea_0889 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001500751.1 1085524 D 398579 CDS YP_001500752.1 157960718 5661289 1086771..1087370 1 NC_009901.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: vpa:VP0620 hypothetical protein; GPR1/FUN34/yaaH family protein 1087370 5661289 Spea_0890 Shewanella pealeana ATCC 700345 GPR1/FUN34/yaaH family protein YP_001500752.1 1086771 D 398579 CDS YP_001500753.1 157960719 5661290 complement(1087484..1089016) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0920 major facilitator superfamily MFS_1; major facilitator transporter 1089016 5661290 Spea_0891 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001500753.1 1087484 R 398579 CDS YP_001500754.1 157960720 5661291 complement(1089579..1090268) 1 NC_009901.1 PFAM: LrgB family protein; KEGG: son:SO_1048 hypothetical protein; LrgB family protein 1090268 5661291 Spea_0892 Shewanella pealeana ATCC 700345 LrgB family protein YP_001500754.1 1089579 R 398579 CDS YP_001500755.1 157960721 5661292 complement(1090265..1090750) 1 NC_009901.1 PFAM: LrgA family protein; KEGG: shn:Shewana3_0885 LrgA family protein; LrgA family protein 1090750 5661292 Spea_0893 Shewanella pealeana ATCC 700345 LrgA family protein YP_001500755.1 1090265 R 398579 CDS YP_001500756.1 157960722 5661293 1090859..1091755 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: she:Shewmr4_3051 transcriptional regulator, LysR family; LysR family transcriptional regulator 1091755 5661293 Spea_0894 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500756.1 1090859 D 398579 CDS YP_001500757.1 157960723 5661294 complement(1091886..1092050) 1 NC_009901.1 PFAM: protein of unknown function UPF0057; KEGG: slo:Shew_0100 protein of unknown function UPF0057; hypothetical protein 1092050 5661294 Spea_0895 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500757.1 1091886 R 398579 CDS YP_001500758.1 157960724 5661295 complement(1092187..1092786) 1 NC_009901.1 PFAM: AMMECR1 domain protein; KEGG: ppr:PBPRA1250 hypothetical protein; AMMECR1 domain-containing protein 1092786 5661295 Spea_0896 Shewanella pealeana ATCC 700345 AMMECR1 domain-containing protein YP_001500758.1 1092187 R 398579 CDS YP_001500759.1 157960725 5661296 complement(1092755..1093591) 1 NC_009901.1 PFAM: protein of unknown function DUF52; KEGG: eba:ebA6549 hypothetical protein; hypothetical protein 1093591 5661296 Spea_0897 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500759.1 1092755 R 398579 CDS YP_001500760.1 157960726 5661297 1093665..1094774 1 NC_009901.1 PFAM: Radical SAM domain protein; KEGG: slo:Shew_0932 radical SAM domain protein; radical SAM domain-containing protein 1094774 5661297 Spea_0898 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001500760.1 1093665 D 398579 CDS YP_001500761.1 157960727 5661298 complement(1094937..1097900) 1 NC_009901.1 KEGG: slo:Shew_0921 hypothetical protein; hypothetical protein 1097900 5661298 Spea_0899 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500761.1 1094937 R 398579 CDS YP_001500762.1 157960728 5661299 1098306..1100027 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_0922 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1100027 5661299 Spea_0900 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001500762.1 1098306 D 398579 CDS YP_001500763.1 157960729 5661300 complement(1100137..1103052) 1 NC_009901.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1103052 valS 5661300 valS Shewanella pealeana ATCC 700345 valyl-tRNA synthetase YP_001500763.1 1100137 R 398579 CDS YP_001500764.1 157960730 5661301 complement(1103072..1103563) 1 NC_009901.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: sbl:Sbal_3111 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit HolC 1103563 5661301 Spea_0902 Shewanella pealeana ATCC 700345 DNA polymerase III chi subunit HolC YP_001500764.1 1103072 R 398579 CDS YP_001500765.1 157960731 5661302 1103801..1105090 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: aha:AHA_0632 ATP-dependent RNA helicase, dead box family; DEAD/DEAH box helicase 1105090 5661302 Spea_0903 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001500765.1 1103801 D 398579 CDS YP_001500766.1 157960732 5661303 1105164..1106072 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VFA0031 transcriptional regulators, LysR family; LysR family transcriptional regulator 1106072 5661303 Spea_0904 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500766.1 1105164 D 398579 CDS YP_001500767.1 157960733 5661304 complement(1106069..1106602) 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: vfi:VFA0032 thioredoxin peroxidase; alkyl hydroperoxide reductase 1106602 5661304 Spea_0905 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001500767.1 1106069 R 398579 CDS YP_001500768.1 157960734 5661305 complement(1106694..1107230) 1 NC_009901.1 KEGG: swi:Swit_1025 hypothetical protein; hypothetical protein 1107230 5661305 Spea_0906 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500768.1 1106694 R 398579 CDS YP_001500769.1 157960735 5661306 1107696..1109018 1 NC_009901.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: shw:Sputw3181_3757 protein of unknown function DUF21; hypothetical protein 1109018 5661306 Spea_0907 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500769.1 1107696 D 398579 CDS YP_001500770.1 157960736 5661307 complement(1109194..1110411) 1 NC_009901.1 PFAM: EAL domain protein; response regulator receiver; KEGG: aha:AHA_0909 response regulator; response regulator receiver modulated diguanylate phosphodiesterase 1110411 5661307 Spea_0908 Shewanella pealeana ATCC 700345 response regulator receiver modulated diguanylate phosphodiesterase YP_001500770.1 1109194 R 398579 CDS YP_001500771.1 157960737 5661308 complement(1110408..1114409) 1 NC_009901.1 PFAM: extracellular solute-binding protein family 3; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: cyb:CYB_0507 sensory box histidine kinase/response regulator; Hpt sensor hybrid histidine kinase 1114409 5661308 Spea_0909 Shewanella pealeana ATCC 700345 Hpt sensor hybrid histidine kinase YP_001500771.1 1110408 R 398579 CDS YP_001500772.1 157960738 5661309 complement(1114869..1116377) 1 NC_009901.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1116377 5661309 Spea_0910 Shewanella pealeana ATCC 700345 leucyl aminopeptidase YP_001500772.1 1114869 R 398579 CDS YP_001500773.1 157960739 5661310 1116601..1117716 1 NC_009901.1 PFAM: permease YjgP/YjgQ family protein; KEGG: slo:Shew_0940 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1117716 5661310 Spea_0911 Shewanella pealeana ATCC 700345 YjgP/YjgQ family permease YP_001500773.1 1116601 D 398579 CDS YP_001500774.1 157960740 5661311 1117713..1118771 1 NC_009901.1 PFAM: permease YjgP/YjgQ family protein; KEGG: sbm:Shew185_3117 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1118771 5661311 Spea_0912 Shewanella pealeana ATCC 700345 YjgP/YjgQ family permease YP_001500774.1 1117713 D 398579 CDS YP_001500775.1 157960741 5661312 complement(1118879..1119403) 1 NC_009901.1 PFAM: RDD domain containing protein; KEGG: slo:Shew_0942 RDD domain containing protein; RDD domain-containing protein 1119403 5661312 Spea_0913 Shewanella pealeana ATCC 700345 RDD domain-containing protein YP_001500775.1 1118879 R 398579 CDS YP_001500776.1 157960742 5661313 complement(1119460..1119714) 1 NC_009901.1 KEGG: slo:Shew_0943 hypothetical protein; hypothetical protein 1119714 5661313 Spea_0914 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500776.1 1119460 R 398579 CDS YP_001500777.1 157960743 5661314 complement(1119760..1120239) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_0944 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1120239 5661314 Spea_0915 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500777.1 1119760 R 398579 CDS YP_001500778.1 157960744 5661315 complement(1120318..1121802) 1 NC_009901.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: shn:Shewana3_2999 peptidase M32, carboxypeptidase Taq metallopeptidase; carboxypeptidase Taq 1121802 5661315 Spea_0916 Shewanella pealeana ATCC 700345 carboxypeptidase Taq YP_001500778.1 1120318 R 398579 CDS YP_001500779.1 157960745 5661316 1122306..1124132 1 NC_009901.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: slo:Shew_2720 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 1124132 5661316 Spea_0917 Shewanella pealeana ATCC 700345 peptidase S8/S53 subtilisin kexin sedolisin YP_001500779.1 1122306 D 398579 CDS YP_001500780.1 157960746 5661317 complement(1124217..1124855) 1 NC_009901.1 KEGG: son:SO_1380 hypothetical protein; hypothetical protein 1124855 5661317 Spea_0918 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500780.1 1124217 R 398579 CDS YP_001500781.1 157960747 5661318 complement(1125070..1126368) 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: shm:Shewmr7_2892 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1126368 5661318 Spea_0919 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001500781.1 1125070 R 398579 CDS YP_001500782.1 157960748 5661319 complement(1126757..1128544) 1 NC_009901.1 PFAM: creatinase; peptidase M24; KEGG: shm:Shewmr7_2890 peptidase M24; peptidase M24 1128544 5661319 Spea_0920 Shewanella pealeana ATCC 700345 peptidase M24 YP_001500782.1 1126757 R 398579 CDS YP_001500783.1 157960749 5661320 1128794..1129981 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_0953 major facilitator superfamily MFS_1; major facilitator transporter 1129981 5661320 Spea_0921 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001500783.1 1128794 D 398579 CDS YP_001500784.1 157960750 5661321 1130192..1131409 1 NC_009901.1 PFAM: creatinase; peptidase M24; KEGG: slo:Shew_0955 peptidase M24; peptidase M24 1131409 5661321 Spea_0922 Shewanella pealeana ATCC 700345 peptidase M24 YP_001500784.1 1130192 D 398579 CDS YP_001500785.1 157960751 5661322 complement(1131675..1132145) 1 NC_009901.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: shn:Shewana3_2983 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 1132145 5661322 Spea_0923 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001500785.1 1131675 R 398579 CDS YP_001500786.1 157960752 5661323 1132435..1133505 1 NC_009901.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: son:SO_A0114 outer membrane protein A; OmpA/MotB domain-containing protein 1133505 5661323 Spea_0924 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001500786.1 1132435 D 398579 CDS YP_001500787.1 157960753 5661324 1133508..1134908 1 NC_009901.1 PFAM: Ig domain protein group 2 domain protein; KEGG: sfr:Sfri_1018 Ig domain protein, group 2 domain protein; Ig domain-containing protein 1134908 5661324 Spea_0925 Shewanella pealeana ATCC 700345 Ig domain-containing protein YP_001500787.1 1133508 D 398579 CDS YP_001500788.1 157960754 5661325 1134971..1136320 1 NC_009901.1 PFAM: Ig domain protein group 2 domain protein; KEGG: sun:SUN_2457 hypothetical protein; Ig domain-containing protein 1136320 5661325 Spea_0926 Shewanella pealeana ATCC 700345 Ig domain-containing protein YP_001500788.1 1134971 D 398579 CDS YP_001500789.1 157960755 5661326 complement(1136395..1137012) 1 NC_009901.1 PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; KEGG: sdn:Sden_2865 protein of unknown function DUF1294; cold-shock DNA-binding domain-containing protein 1137012 5661326 Spea_0927 Shewanella pealeana ATCC 700345 cold-shock DNA-binding domain-containing protein YP_001500789.1 1136395 R 398579 CDS YP_001500790.1 157960756 5661327 complement(1137057..1137356) 1 NC_009901.1 PFAM: regulatory protein ArsR; KEGG: ppr:PBPRA2744 hypothetical transcriptional regulator, ArsR family; ArsR family transcriptional regulator 1137356 5661327 Spea_0928 Shewanella pealeana ATCC 700345 ArsR family transcriptional regulator YP_001500790.1 1137057 R 398579 CDS YP_001500791.1 157960757 5661328 complement(1137456..1137956) 1 NC_009901.1 KEGG: shm:Shewmr7_2880 hypothetical protein; hypothetical protein 1137956 5661328 Spea_0929 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500791.1 1137456 R 398579 CDS YP_001500792.1 157960758 5661329 1138130..1139047 1 NC_009901.1 PFAM: protein of unknown function DUF368; KEGG: slo:Shew_0960 protein of unknown function DUF368; hypothetical protein 1139047 5661329 Spea_0930 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500792.1 1138130 D 398579 CDS YP_001500793.1 157960759 5661330 complement(1139170..1139514) 1 NC_009901.1 KEGG: slo:Shew_0961 hypothetical protein; hypothetical protein 1139514 5661330 Spea_0931 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500793.1 1139170 R 398579 CDS YP_001500794.1 157960760 5661331 1139689..1139871 1 NC_009901.1 KEGG: slo:Shew_0962 hypothetical protein; hypothetical protein 1139871 5661331 Spea_0932 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500794.1 1139689 D 398579 CDS YP_001500795.1 157960761 5661332 complement(1139998..1140732) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0963 hypothetical protein; hypothetical protein 1140732 5661332 Spea_0933 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500795.1 1139998 R 398579 CDS YP_001500796.1 157960762 5661333 complement(1140886..1141272) 1 NC_009901.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: slo:Shew_0964 protein of unknown function DUF861, cupin_3; hypothetical protein 1141272 5661333 Spea_0934 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500796.1 1140886 R 398579 CDS YP_001500797.1 157960763 5661334 complement(1141341..1142846) 1 NC_009901.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: slo:Shew_0965 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1142846 5661334 Spea_0935 Shewanella pealeana ATCC 700345 methylmalonate-semialdehyde dehydrogenase YP_001500797.1 1141341 R 398579 CDS YP_001500798.1 157960764 5661335 complement(1142961..1144301) 1 NC_009901.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1144301 5661335 Spea_0936 Shewanella pealeana ATCC 700345 beta alanine--pyruvate transaminase YP_001500798.1 1142961 R 398579 CDS YP_001500799.1 157960765 5661336 1144577..1146076 1 NC_009901.1 PFAM: aldehyde dehydrogenase; KEGG: shw:Sputw3181_3079 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 1146076 5661336 Spea_0937 Shewanella pealeana ATCC 700345 aldehyde dehydrogenase YP_001500799.1 1144577 D 398579 CDS YP_001500800.1 157960766 5661337 1146278..1147474 1 NC_009901.1 PFAM: regulatory protein MerR; Methyltransferase type 11; Methyltransferase type 12; KEGG: dps:DPPB100 probable transcription regulator; MerR family transcriptional regulator 1147474 5661337 Spea_0938 Shewanella pealeana ATCC 700345 MerR family transcriptional regulator YP_001500800.1 1146278 D 398579 CDS YP_001500801.1 157960767 5661338 1147510..1148046 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dde:Dde_3171 acetyltransferase; N-acetyltransferase GCN5 1148046 5661338 Spea_0939 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500801.1 1147510 D 398579 CDS YP_001500802.1 157960768 5661339 1148172..1148729 1 NC_009901.1 TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: sfr:Sfri_1665 putative adenylyl cyclase CyaB; putative adenylyl cyclase CyaB 1148729 5661339 Spea_0940 Shewanella pealeana ATCC 700345 putative adenylyl cyclase CyaB YP_001500802.1 1148172 D 398579 CDS YP_001500803.1 157960769 5661340 1148796..1149488 1 NC_009901.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: dps:DP1920 hypothetical protein; aspartate racemase 1149488 5661340 Spea_0941 Shewanella pealeana ATCC 700345 aspartate racemase YP_001500803.1 1148796 D 398579 CDS YP_001500804.1 157960770 5661341 complement(1149649..1150956) 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: she:Shewmr4_2922 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1150956 5661341 Spea_0942 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001500804.1 1149649 R 398579 CDS YP_001500805.1 157960771 5661342 1151198..1151746 1 NC_009901.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: shn:Shewana3_3100 transcriptional regulator, XRE family; XRE family transcriptional regulator 1151746 5661342 Spea_0943 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001500805.1 1151198 D 398579 CDS YP_001500806.1 157960772 5661343 1152244..1153005 1 NC_009901.1 PFAM: peptidase C26; KEGG: slo:Shew_0971 peptidase C26; peptidase C26 1153005 5661343 Spea_0944 Shewanella pealeana ATCC 700345 peptidase C26 YP_001500806.1 1152244 D 398579 CDS YP_001500807.1 157960773 5661344 1153008..1154357 1 NC_009901.1 PFAM: glutamine synthetase catalytic region; KEGG: slo:Shew_0972 glutamate--ammonia ligase; glutamate--putrescine ligase 1154357 5661344 Spea_0945 Shewanella pealeana ATCC 700345 glutamate--putrescine ligase YP_001500807.1 1153008 D 398579 CDS YP_001500808.1 157960774 5661345 1154615..1155715 1 NC_009901.1 PFAM: extracellular solute-binding protein family 1; KEGG: slo:Shew_0973 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1155715 5661345 Spea_0946 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001500808.1 1154615 D 398579 CDS YP_001500809.1 157960775 5661346 1155816..1156952 1 NC_009901.1 KEGG: slo:Shew_0974 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1156952 5661346 Spea_0947 Shewanella pealeana ATCC 700345 spermidine/putrescine ABC transporter ATPase YP_001500809.1 1155816 D 398579 CDS YP_001500810.1 157960776 5661347 1156963..1157868 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_0975 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1157868 5661347 Spea_0948 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001500810.1 1156963 D 398579 CDS YP_001500811.1 157960777 5661348 1157865..1158680 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_0976 binding-protein-dependent transport systems inner membrane component; ornithine carbamoyltransferase 1158680 5661348 Spea_0949 Shewanella pealeana ATCC 700345 ornithine carbamoyltransferase YP_001500811.1 1157865 D 398579 CDS YP_001500812.1 157960778 5661349 1158843..1160165 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: slo:Shew_0977 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1160165 5661349 Spea_0950 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001500812.1 1158843 D 398579 CDS YP_001500813.1 157960779 5661350 1160248..1161696 1 NC_009901.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: shn:Shewana3_3092 succinic semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 1161696 5661350 Spea_0951 Shewanella pealeana ATCC 700345 succinate-semialdehyde dehydrogenase YP_001500813.1 1160248 D 398579 CDS YP_001500814.1 157960780 5661351 1161738..1163015 1 NC_009901.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 1163015 5661351 Spea_0952 Shewanella pealeana ATCC 700345 4-aminobutyrate aminotransferase YP_001500814.1 1161738 D 398579 CDS YP_001500815.1 157960781 5661352 complement(1163125..1163556) 1 NC_009901.1 PFAM: UspA domain protein; KEGG: slo:Shew_3101 UspA domain protein; UspA domain-containing protein 1163556 5661352 Spea_0953 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001500815.1 1163125 R 398579 CDS YP_001500816.1 157960782 5661353 1164302..1164634 1 NC_009901.1 KEGG: vha:VIBHAR_05467 hypothetical protein; hypothetical protein 1164634 5661353 Spea_0954 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500816.1 1164302 D 398579 CDS YP_001500817.1 157960783 5661354 1164638..1166044 1 NC_009901.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1166044 5661354 Spea_0955 Shewanella pealeana ATCC 700345 cbb3-type cytochrome c oxidase subunit I YP_001500817.1 1164638 D 398579 CDS YP_001500818.1 157960784 5661355 1166037..1166651 1 NC_009901.1 PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: vha:VIBHAR_05465 hypothetical protein; cytochrome C oxidase mono-heme subunit/FixO 1166651 5661355 Spea_0956 Shewanella pealeana ATCC 700345 cytochrome C oxidase mono-heme subunit/FixO YP_001500818.1 1166037 D 398579 CDS YP_001500819.1 157960785 5661356 1166653..1168824 1 NC_009901.1 PFAM: cytochrome c class I; KEGG: vha:VIBHAR_05464 hypothetical protein; gluconate 2-dehydrogenase 1168824 5661356 Spea_0957 Shewanella pealeana ATCC 700345 gluconate 2-dehydrogenase YP_001500819.1 1166653 D 398579 CDS YP_001500820.1 157960786 5664687 complement(1169239..1171089) 1 NC_009901.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma-70; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 non-essential domain protein; sigma-70 region 1.2; KEGG: slo:Shew_0996 RNA polymerase, sigma 70 subunit, RpoD family; RNA polymerase sigma-70 subunit RpoD 1171089 5664687 Spea_0958 Shewanella pealeana ATCC 700345 RNA polymerase sigma-70 subunit RpoD YP_001500820.1 1169239 R 398579 CDS YP_001500821.1 157960787 5661358 complement(1171207..1172937) 1 NC_009901.1 KEGG: slo:Shew_0997 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase DnaG DnaB-binding; DNA primase catalytic core domain; SMART: Toprim sub domain protein; DNA primase 1172937 5661358 Spea_0959 Shewanella pealeana ATCC 700345 DNA primase YP_001500821.1 1171207 R 398579 CDS YP_001500822.1 157960788 5661359 complement(1173075..1173518) 1 NC_009901.1 KEGG: slo:Shew_0998 GatB/YqeY domain protein; GatB/YqeY domain-containing protein 1173518 5661359 Spea_0960 Shewanella pealeana ATCC 700345 GatB/YqeY domain-containing protein YP_001500822.1 1173075 R 398579 CDS YP_001500823.1 157960789 5661360 complement(1173526..1173741) 1 NC_009901.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1173741 rpsU 5661360 rpsU Shewanella pealeana ATCC 700345 30S ribosomal protein S21 YP_001500823.1 1173526 R 398579 CDS YP_001500824.1 157960790 5661361 1173970..1174986 1 NC_009901.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1174986 5661361 Spea_0962 Shewanella pealeana ATCC 700345 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001500824.1 1173970 D 398579 CDS YP_001500825.1 157960791 5661362 complement(1175061..1175735) 1 NC_009901.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: son:SO_3563 SM-20 domain protein; 2OG-Fe(II) oxygenase 1175735 5661362 Spea_0963 Shewanella pealeana ATCC 700345 2OG-Fe(II) oxygenase YP_001500825.1 1175061 R 398579 CDS YP_001500826.1 157960792 5661363 complement(1176000..1176572) 1 NC_009901.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 1176572 5661363 Spea_0964 Shewanella pealeana ATCC 700345 putative glycerol-3-phosphate acyltransferase PlsY YP_001500826.1 1176000 R 398579 CDS YP_001500827.1 157960793 5661364 1176911..1177264 1 NC_009901.1 TIGRFAM: dihydroneopterin aldolase; KEGG: slo:Shew_1002 dihydroneopterin aldolase; dihydroneopterin aldolase 1177264 5661364 Spea_0965 Shewanella pealeana ATCC 700345 dihydroneopterin aldolase YP_001500827.1 1176911 D 398579 CDS YP_001500828.1 157960794 5661365 1177265..1177756 1 NC_009901.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: she:Shewmr4_2901 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1177756 5661365 Spea_0966 Shewanella pealeana ATCC 700345 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001500828.1 1177265 D 398579 CDS YP_001500829.1 157960795 5661366 1177781..1178581 1 NC_009901.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1178581 5661366 Spea_0967 Shewanella pealeana ATCC 700345 undecaprenyl pyrophosphate phosphatase YP_001500829.1 1177781 D 398579 CDS YP_001500830.1 157960796 5661367 1178635..1179468 1 NC_009901.1 KEGG: slo:Shew_1005 rRNA (guanine-N(1)-)-methyltransferase; rRNA (guanine-N(1)-)-methyltransferase 1179468 5661367 Spea_0968 Shewanella pealeana ATCC 700345 rRNA (guanine-N(1)-)-methyltransferase YP_001500830.1 1178635 D 398579 CDS YP_001500831.1 157960797 5661368 1179521..1180432 1 NC_009901.1 PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: slo:Shew_1006 ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1180432 5661368 Spea_0969 Shewanella pealeana ATCC 700345 ErfK/YbiS/YcfS/YnhG family protein YP_001500831.1 1179521 D 398579 CDS YP_001500832.1 157960798 5661369 complement(1180629..1180895) 1 NC_009901.1 KEGG: slo:Shew_1007 major outer membrane lipoprotein, putative; major outer membrane lipoprotein 1180895 5661369 Spea_0970 Shewanella pealeana ATCC 700345 major outer membrane lipoprotein YP_001500832.1 1180629 R 398579 CDS YP_001500833.1 157960799 5661370 complement(1181112..1182350) 1 NC_009901.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: slo:Shew_1008 metal dependent phosphohydrolase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 1182350 5661370 Spea_0971 Shewanella pealeana ATCC 700345 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_001500833.1 1181112 R 398579 CDS YP_001500834.1 157960800 5661371 1182757..1184433 1 NC_009901.1 PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: slo:Shew_1009 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain-containing protein 1184433 5661371 Spea_0972 Shewanella pealeana ATCC 700345 peptidoglycan-binding domain-containing protein YP_001500834.1 1182757 D 398579 CDS YP_001500835.1 157960801 5661372 1184433..1185509 1 NC_009901.1 KEGG: sbm:Shew185_1201 general secretion pathway protein B; general secretion pathway protein B 1185509 5661372 Spea_0973 Shewanella pealeana ATCC 700345 general secretion pathway protein B YP_001500835.1 1184433 D 398579 CDS YP_001500836.1 157960802 5661373 complement(1185605..1186894) 1 NC_009901.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1186894 5661373 Spea_0974 Shewanella pealeana ATCC 700345 glutamate-1-semialdehyde aminotransferase YP_001500836.1 1185605 R 398579 CDS YP_001500837.1 157960803 5661374 complement(1186922..1187941) 1 NC_009901.1 Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate; aspartate carbamoyltransferase 1187941 5661374 Spea_0975 Shewanella pealeana ATCC 700345 aspartate carbamoyltransferase YP_001500837.1 1186922 R 398579 CDS YP_001500838.1 157960804 5661375 1188205..1189020 1 NC_009901.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1189020 5661375 Spea_0976 Shewanella pealeana ATCC 700345 prolipoprotein diacylglyceryl transferase YP_001500838.1 1188205 D 398579 CDS YP_001500839.1 157960805 5661376 complement(1189129..1191285) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbm:Shew185_0291 TonB-dependent receptor; TonB-dependent receptor 1191285 5661376 Spea_0977 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500839.1 1189129 R 398579 CDS YP_001500840.1 157960806 5661377 complement(1191649..1192713) 1 NC_009901.1 KEGG: slo:Shew_3159 uncharacterized FlgJ-related protein-like; FlgJ-like protein 1192713 5661377 Spea_0978 Shewanella pealeana ATCC 700345 FlgJ-like protein YP_001500840.1 1191649 R 398579 CDS YP_001500841.1 157960807 5661378 complement(1193085..1193495) 1 NC_009901.1 PFAM: cytochrome c class I; KEGG: sbl:Sbal_0009 monoheme cytochrome c; cytochrome c class I 1193495 5661378 Spea_0979 Shewanella pealeana ATCC 700345 cytochrome c class I YP_001500841.1 1193085 R 398579 CDS YP_001500842.1 157960808 5661379 complement(1193497..1193886) 1 NC_009901.1 KEGG: son:SO_0716 monoheme cytochrome c, putative; hypothetical protein 1193886 5661379 Spea_0980 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500842.1 1193497 R 398579 CDS YP_001500843.1 157960809 5661380 complement(1193886..1195112) 1 NC_009901.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: sbl:Sbal_0007 oxidoreductase, molybdopterin binding; molybdopterin-binding oxidoreductase 1195112 5661380 Spea_0981 Shewanella pealeana ATCC 700345 molybdopterin-binding oxidoreductase YP_001500843.1 1193886 R 398579 CDS YP_001500844.1 157960810 5661381 complement(1195112..1195432) 1 NC_009901.1 PFAM: cytochrome c class I; KEGG: sbl:Sbal_0006 monoheme cytochrome c; cytochrome c class I 1195432 5661381 Spea_0982 Shewanella pealeana ATCC 700345 cytochrome c class I YP_001500844.1 1195112 R 398579 CDS YP_001500845.1 157960811 5661382 complement(1196074..1197795) 1 NC_009901.1 PFAM: Chloride channel core; KEGG: slo:Shew_1015 Cl-channel, voltage-gated family protein; chloride channel protein 1197795 5661382 Spea_0983 Shewanella pealeana ATCC 700345 chloride channel protein YP_001500845.1 1196074 R 398579 CDS YP_001500846.1 157960812 5661383 1197857..1198660 1 NC_009901.1 KEGG: slo:Shew_1016 hypothetical protein; hypothetical protein 1198660 5661383 Spea_0984 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500846.1 1197857 D 398579 CDS YP_001500847.1 157960813 5661384 1198653..1199003 1 NC_009901.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 1199003 5661384 Spea_0985 Shewanella pealeana ATCC 700345 iron-sulfur cluster insertion protein ErpA YP_001500847.1 1198653 D 398579 CDS YP_001500848.1 157960814 5661385 complement(1199079..1199471) 1 NC_009901.1 KEGG: slo:Shew_1018 hypothetical protein; hypothetical protein 1199471 5661385 Spea_0986 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500848.1 1199079 R 398579 CDS YP_001500849.1 157960815 5661386 complement(1199704..1200084) 1 NC_009901.1 KEGG: shw:Sputw3181_3039 hypothetical protein; hypothetical protein 1200084 5661386 Spea_0987 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500849.1 1199704 R 398579 CDS YP_001500850.1 157960816 5661387 complement(1200210..1200917) 1 NC_009901.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 1200917 5661387 Spea_0988 Shewanella pealeana ATCC 700345 aquaporin Z YP_001500850.1 1200210 R 398579 CDS YP_001500851.1 157960817 5661388 complement(1201053..1202495) 1 NC_009901.1 PFAM: Alkaline phosphatase; KEGG: vpa:VPA1073 putative alkaline phosphatase; alkaline phosphatase 1202495 5661388 Spea_0989 Shewanella pealeana ATCC 700345 alkaline phosphatase YP_001500851.1 1201053 R 398579 CDS YP_001500852.1 157960818 5661389 complement(1202509..1205031) 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: she:Shewmr4_2884 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1205031 5661389 Spea_0990 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001500852.1 1202509 R 398579 CDS YP_001500853.1 157960819 5661390 complement(1205124..1207901) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: vvy:VV0250 outer membrane receptor protein; TonB-dependent receptor 1207901 5661390 Spea_0991 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500853.1 1205124 R 398579 CDS YP_001500854.1 157960820 5661391 1208255..1210402 1 NC_009901.1 PFAM: transcriptional regulator domain protein; WD40 domain protein beta Propeller; KEGG: shm:Shewmr7_2965 transcriptional regulator domain protein; winged helix family two component response transcriptional regulator 1210402 5661391 Spea_0992 Shewanella pealeana ATCC 700345 winged helix family two component response transcriptional regulator YP_001500854.1 1208255 D 398579 CDS YP_001500855.1 157960821 5661392 complement(1210630..1211739) 1 NC_009901.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1211739 anmK 5661392 anmK Shewanella pealeana ATCC 700345 anhydro-N-acetylmuramic acid kinase YP_001500855.1 1210630 R 398579 CDS YP_001500856.1 157960822 5661393 complement(1211799..1213211) 1 NC_009901.1 PFAM: peptidase M23B; Opacity-associated protein A domain protein; KEGG: slo:Shew_1021 peptidase M23B; peptidase M23B 1213211 5661393 Spea_0994 Shewanella pealeana ATCC 700345 peptidase M23B YP_001500856.1 1211799 R 398579 CDS YP_001500857.1 157960823 5661394 1213339..1214535 1 NC_009901.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1214535 5661394 Spea_0995 Shewanella pealeana ATCC 700345 tyrosyl-tRNA synthetase YP_001500857.1 1213339 D 398579 CDS YP_001500858.1 157960824 5661395 complement(1214613..1215023) 1 NC_009901.1 KEGG: shm:Shewmr7_2961 hypothetical protein; hypothetical protein 1215023 5661395 Spea_0996 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500858.1 1214613 R 398579 CDS YP_001500859.1 157960825 5661396 complement(1215242..1215721) 1 NC_009901.1 KEGG: slo:Shew_1023 hypothetical protein; hypothetical protein 1215721 5661396 Spea_0997 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500859.1 1215242 R 398579 CDS YP_001500860.1 157960826 5661397 complement(1215721..1216344) 1 NC_009901.1 PFAM: protein of unknown function UPF0126; KEGG: slo:Shew_1024 protein of unknown function UPF0126; hypothetical protein 1216344 5661397 Spea_0998 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500860.1 1215721 R 398579 CDS YP_001500861.1 157960827 5661398 complement(1216341..1216730) 1 NC_009901.1 KEGG: slo:Shew_1025 hypothetical protein; hypothetical protein 1216730 5661398 Spea_0999 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500861.1 1216341 R 398579 CDS YP_001500862.1 157960828 5661399 complement(1216887..1217867) 1 NC_009901.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: shn:Shewana3_3053 cobalamin biosynthesis protein CbiB; cobalamin biosynthesis protein CbiB 1217867 5661399 Spea_1000 Shewanella pealeana ATCC 700345 cobalamin biosynthesis protein CbiB YP_001500862.1 1216887 R 398579 CDS YP_001500863.1 157960829 5661400 complement(1217954..1218646) 1 NC_009901.1 PFAM: purine or other phosphorylase family 1; KEGG: shn:Shewana3_3052 purine and other phosphorylases, family 1; adenosylhomocysteine nucleosidase 1218646 5661400 Spea_1001 Shewanella pealeana ATCC 700345 adenosylhomocysteine nucleosidase YP_001500863.1 1217954 R 398579 CDS YP_001500864.1 157960830 5661401 1219028..1220359 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE3 domain protein; KEGG: pin:Ping_3077 diguanylate cyclase; diguanylate cyclase 1220359 5661401 Spea_1002 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001500864.1 1219028 D 398579 CDS YP_001500865.1 157960831 5661402 1220434..1220889 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_0291 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1220889 5661402 Spea_1003 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500865.1 1220434 D 398579 CDS YP_001500866.1 157960832 5661403 complement(1220902..1221375) 1 NC_009901.1 PFAM: regulatory protein MarR; KEGG: sfr:Sfri_1943 transcriptional regulator, MarR family protein; MarR family transcriptional regulator 1221375 5661403 Spea_1004 Shewanella pealeana ATCC 700345 MarR family transcriptional regulator YP_001500866.1 1220902 R 398579 CDS YP_001500867.1 157960833 5661404 complement(1221568..1222272) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: sfr:Sfri_1944 hypothetical protein; hypothetical protein 1222272 5661404 Spea_1005 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500867.1 1221568 R 398579 CDS YP_001500868.1 157960834 5661405 complement(1222292..1223509) 1 NC_009901.1 KEGG: sfr:Sfri_1945 putative transporter, BCCT family protein; putative BCCT family protein transporter 1223509 5661405 Spea_1006 Shewanella pealeana ATCC 700345 putative BCCT family protein transporter YP_001500868.1 1222292 R 398579 CDS YP_001500869.1 157960835 5661406 complement(1223842..1225539) 1 NC_009901.1 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1225539 5661406 Spea_1007 Shewanella pealeana ATCC 700345 choline dehydrogenase YP_001500869.1 1223842 R 398579 CDS YP_001500870.1 157960836 5661407 complement(1225549..1227012) 1 NC_009901.1 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1227012 5661407 Spea_1008 Shewanella pealeana ATCC 700345 betaine aldehyde dehydrogenase YP_001500870.1 1225549 R 398579 CDS YP_001500871.1 157960837 5661408 complement(1227003..1227608) 1 NC_009901.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1227608 5661408 Spea_1009 Shewanella pealeana ATCC 700345 transcriptional regulator BetI YP_001500871.1 1227003 R 398579 CDS YP_001500872.1 157960838 5661409 1228104..1229078 1 NC_009901.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sfr:Sfri_3408 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1229078 5661409 Spea_1010 Shewanella pealeana ATCC 700345 inosine/uridine-preferring nucleoside hydrolase YP_001500872.1 1228104 D 398579 CDS YP_001500873.1 157960839 5661410 complement(1229331..1230527) 1 NC_009901.1 PFAM: regulatory protein DeoR; PfkB domain protein; Helix-turn-helix type 11 domain protein; Phosphomethylpyrimidine kinase type-1; KEGG: sfr:Sfri_3407 ribokinase; ribokinase-like domain-containing protein 1230527 5661410 Spea_1011 Shewanella pealeana ATCC 700345 ribokinase-like domain-containing protein YP_001500873.1 1229331 R 398579 CDS YP_001500874.1 157960840 5661411 complement(1230944..1232353) 1 NC_009901.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1232353 gltD 5661411 gltD Shewanella pealeana ATCC 700345 glutamate synthase subunit beta YP_001500874.1 1230944 R 398579 CDS YP_001500875.1 157960841 5661412 complement(1232360..1236808) 1 NC_009901.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 1236808 gltB 5661412 gltB Shewanella pealeana ATCC 700345 glutamate synthase subunit alpha YP_001500875.1 1232360 R 398579 CDS YP_001500876.1 157960842 5661413 1237298..1238227 1 NC_009901.1 KEGG: slo:Shew_1033 conserved hypothetical radical SAM protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein 1238227 5661413 Spea_1014 Shewanella pealeana ATCC 700345 putative radical SAM protein YP_001500876.1 1237298 D 398579 CDS YP_001500877.1 157960843 5661414 1238430..1238795 1 NC_009901.1 PFAM: Hpt domain protein; KEGG: shm:Shewmr7_2951 Hpt protein; Hpt protein 1238795 5661414 Spea_1015 Shewanella pealeana ATCC 700345 Hpt protein YP_001500877.1 1238430 D 398579 CDS YP_001500878.1 157960844 5661415 1238980..1239915 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_1035 transcriptional regulator, LysR family; LysR family transcriptional regulator 1239915 5661415 Spea_1016 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500878.1 1238980 D 398579 CDS YP_001500879.1 157960845 5661416 complement(1240325..1241053) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 1241053 5661416 Spea_1017 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001500879.1 1240325 R 398579 CDS YP_001500880.1 157960846 5661417 complement(1241170..1241553) 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 1241553 5661417 Spea_1018 Shewanella pealeana ATCC 700345 transposase YP_001500880.1 1241170 R 398579 CDS YP_001500881.1 157960847 5661418 complement(1241646..1242719) 1 NC_009901.1 KEGG: sbm:Shew185_1226 putative adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 1242719 5661418 Spea_1019 Shewanella pealeana ATCC 700345 putative adenylate/guanylate cyclase YP_001500881.1 1241646 R 398579 CDS YP_001500882.1 157960848 5661419 complement(1242845..1243516) 1 NC_009901.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 1243516 5661419 Spea_1020 Shewanella pealeana ATCC 700345 DNA mismatch repair protein YP_001500882.1 1242845 R 398579 CDS YP_001500883.1 157960849 5661420 1244208..1244729 1 NC_009901.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1244729 5661420 Spea_1021 Shewanella pealeana ATCC 700345 dinucleoside polyphosphate hydrolase YP_001500883.1 1244208 D 398579 CDS YP_001500884.1 157960850 5661421 1244748..1246982 1 NC_009901.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: shm:Shewmr7_2946 PTSINtr with GAF domain, PtsP; phosphoenolpyruvate-protein phosphotransferase PtsP 1246982 5661421 Spea_1022 Shewanella pealeana ATCC 700345 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001500884.1 1244748 D 398579 CDS YP_001500885.1 157960851 5661422 1247057..1247857 1 NC_009901.1 PFAM: protein of unknown function DUF81; KEGG: shm:Shewmr7_2945 protein of unknown function DUF81; hypothetical protein 1247857 5661422 Spea_1023 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500885.1 1247057 D 398579 CDS YP_001500886.1 157960852 5661423 1247941..1248792 1 NC_009901.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1248792 thyA 5661423 thyA Shewanella pealeana ATCC 700345 thymidylate synthase YP_001500886.1 1247941 D 398579 CDS YP_001500887.1 157960853 5661424 1249284..1250459 1 NC_009901.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1250459 nhaA 5661424 nhaA Shewanella pealeana ATCC 700345 pH-dependent sodium/proton antiporter YP_001500887.1 1249284 D 398579 CDS YP_001500888.1 157960854 5661425 1250456..1250839 1 NC_009901.1 KEGG: slo:Shew_1043 hypothetical protein; hypothetical protein 1250839 5661425 Spea_1026 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500888.1 1250456 D 398579 CDS YP_001500889.1 157960855 5661426 1250909..1251817 1 NC_009901.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 1251817 nhaR 5661426 nhaR Shewanella pealeana ATCC 700345 transcriptional activator NhaR YP_001500889.1 1250909 D 398579 CDS YP_001500890.1 157960856 5661427 1251978..1252217 1 NC_009901.1 PFAM: protein of unknown function DUF339; KEGG: sfr:Sfri_2938 protein of unknown function DUF339; hypothetical protein 1252217 5661427 Spea_1028 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500890.1 1251978 D 398579 CDS YP_001500891.1 157960857 5661428 1252198..1252614 1 NC_009901.1 KEGG: sbm:Shew185_1237 hypothetical protein; hypothetical protein 1252614 5661428 Spea_1029 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500891.1 1252198 D 398579 CDS YP_001500892.1 157960858 5661429 complement(1252672..1254282) 1 NC_009901.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1254282 5661429 Spea_1030 Shewanella pealeana ATCC 700345 L-aspartate oxidase YP_001500892.1 1252672 R 398579 CDS YP_001500893.1 157960859 5661430 1254502..1255080 1 NC_009901.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1255080 5661430 Spea_1031 Shewanella pealeana ATCC 700345 RNA polymerase sigma factor RpoE YP_001500893.1 1254502 D 398579 CDS YP_001500894.1 157960860 5661431 1255104..1255709 1 NC_009901.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: slo:Shew_1049 anti sigma-E protein, RseA; anti sigma-E protein, RseA 1255709 5661431 Spea_1032 Shewanella pealeana ATCC 700345 anti sigma-E protein, RseA YP_001500894.1 1255104 D 398579 CDS YP_001500895.1 157960861 5661432 1255722..1256654 1 NC_009901.1 PFAM: MucB/RseB family protein; KEGG: she:Shewmr4_2852 sigma E regulatory protein, MucB/RseB; sigma E regulatory protein MucB/RseB 1256654 5661432 Spea_1033 Shewanella pealeana ATCC 700345 sigma E regulatory protein MucB/RseB YP_001500895.1 1255722 D 398579 CDS YP_001500896.1 157960862 5661433 1256668..1257132 1 NC_009901.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: sbl:Sbal_1198 positive regulator of sigma E, RseC/MucC; sigma E positive regulator RseC/MucC 1257132 5661433 Spea_1034 Shewanella pealeana ATCC 700345 sigma E positive regulator RseC/MucC YP_001500896.1 1256668 D 398579 CDS YP_001500897.1 157960863 5661434 1257261..1259051 1 NC_009901.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1259051 5661434 Spea_1035 Shewanella pealeana ATCC 700345 GTP-binding protein LepA YP_001500897.1 1257261 D 398579 CDS YP_001500898.1 157960864 5661435 1259192..1260109 1 NC_009901.1 KEGG: slo:Shew_1053 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1260109 5661435 Spea_1036 Shewanella pealeana ATCC 700345 signal peptidase I YP_001500898.1 1259192 D 398579 CDS YP_001500899.1 157960865 5661436 1260111..1260788 1 NC_009901.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1260788 rnc 5661436 rnc Shewanella pealeana ATCC 700345 ribonuclease III YP_001500899.1 1260111 D 398579 CDS YP_001500900.1 157960866 5661437 1260785..1261777 1 NC_009901.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1261777 era 5661437 era Shewanella pealeana ATCC 700345 GTP-binding protein Era YP_001500900.1 1260785 D 398579 CDS YP_001500901.1 157960867 5661438 1261937..1262626 1 NC_009901.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: slo:Shew_1056 DNA repair protein RecO; DNA repair protein RecO 1262626 5661438 Spea_1039 Shewanella pealeana ATCC 700345 DNA repair protein RecO YP_001500901.1 1261937 D 398579 CDS YP_001500902.1 157960868 5661439 1262750..1263487 1 NC_009901.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1263487 5661439 Spea_1040 Shewanella pealeana ATCC 700345 pyridoxine 5'-phosphate synthase YP_001500902.1 1262750 D 398579 CDS YP_001500903.1 157960869 5661440 1263587..1263982 1 NC_009901.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1263982 acpS 5661440 acpS Shewanella pealeana ATCC 700345 4'-phosphopantetheinyl transferase YP_001500903.1 1263587 D 398579 CDS YP_001500904.1 157960870 5661441 complement(1263996..1264484) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bsu:BG10906 spermine/spermidine acetyltransferase; N-acetyltransferase GCN5 1264484 5661441 Spea_1042 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001500904.1 1263996 R 398579 CDS YP_001500905.1 157960871 5661442 complement(1264914..1265855) 1 NC_009901.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: zmo:ZMO1573 predicted iron-dependent peroxidase; Dyp-type peroxidase family protein 1265855 5661442 Spea_1043 Shewanella pealeana ATCC 700345 Dyp-type peroxidase family protein YP_001500905.1 1264914 R 398579 CDS YP_001500906.1 157960872 5661443 1266453..1267511 1 NC_009901.1 KEGG: slo:Shew_2460 hypothetical protein; hypothetical protein 1267511 5661443 Spea_1044 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500906.1 1266453 D 398579 CDS YP_001500907.1 157960873 5661444 1267843..1268376 1 NC_009901.1 PFAM: protein of unknown function DUF962; KEGG: slo:Shew_1059 protein of unknown function DUF962; hypothetical protein 1268376 5661444 Spea_1045 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500907.1 1267843 D 398579 CDS YP_001500908.1 157960874 5661445 complement(1268473..1269756) 1 NC_009901.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: slo:Shew_1060 protein of unknown function DUF21; hypothetical protein 1269756 5661445 Spea_1046 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500908.1 1268473 R 398579 CDS YP_001500909.1 157960875 5661446 complement(1269902..1270690) 1 NC_009901.1 PFAM: cytochrome c assembly protein; KEGG: slo:Shew_1061 cytochrome c assembly protein; cytochrome c assembly protein 1270690 5661446 Spea_1047 Shewanella pealeana ATCC 700345 cytochrome c assembly protein YP_001500909.1 1269902 R 398579 CDS YP_001500910.1 157960876 5661447 1271098..1272471 1 NC_009901.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1272471 5661447 Spea_1048 Shewanella pealeana ATCC 700345 signal recognition particle protein YP_001500910.1 1271098 D 398579 CDS YP_001500911.1 157960877 5661448 1272689..1272940 1 NC_009901.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1272940 rpsP 5661448 rpsP Shewanella pealeana ATCC 700345 30S ribosomal protein S16 YP_001500911.1 1272689 D 398579 CDS YP_001500912.1 157960878 5661449 1272961..1273491 1 NC_009901.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1273491 rimM 5661449 rimM Shewanella pealeana ATCC 700345 16S rRNA-processing protein RimM YP_001500912.1 1272961 D 398579 CDS YP_001500913.1 157960879 5661450 1273507..1274253 1 NC_009901.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1274253 trmD 5661450 trmD Shewanella pealeana ATCC 700345 tRNA (guanine-N(1)-)-methyltransferase YP_001500913.1 1273507 D 398579 CDS YP_001500914.1 157960880 5661451 1274290..1274643 1 NC_009901.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1274643 rplS 5661451 rplS Shewanella pealeana ATCC 700345 50S ribosomal protein L19 YP_001500914.1 1274290 D 398579 CDS YP_001500915.1 157960881 5661452 1275021..1276112 1 NC_009901.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1276112 5661452 Spea_1053 Shewanella pealeana ATCC 700345 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001500915.1 1275021 D 398579 CDS YP_001500916.1 157960882 5661453 1276112..1277266 1 NC_009901.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1277266 tyrA 5661453 tyrA Shewanella pealeana ATCC 700345 bifunctional chorismate mutase/prephenate dehydrogenase YP_001500916.1 1276112 D 398579 CDS YP_001500917.1 157960883 5661454 1277672..1279336 1 NC_009901.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1279336 5661454 Spea_1055 Shewanella pealeana ATCC 700345 hydroxylamine reductase YP_001500917.1 1277672 D 398579 CDS YP_001500918.1 157960884 5661455 1279439..1280563 1 NC_009901.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: slo:Shew_1070 oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit 1280563 5661455 Spea_1056 Shewanella pealeana ATCC 700345 oxidoreductase FAD-binding subunit YP_001500918.1 1279439 D 398579 CDS YP_001500919.1 157960885 5661456 1280747..1281085 1 NC_009901.1 KEGG: sfr:Sfri_2914 hypothetical protein; hypothetical protein 1281085 5661456 Spea_1057 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500919.1 1280747 D 398579 CDS YP_001500920.1 157960886 5661457 1281133..1282419 1 NC_009901.1 PFAM: sodium/hydrogen exchanger; KEGG: sbm:Shew185_1263 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1282419 5661457 Spea_1058 Shewanella pealeana ATCC 700345 sodium/hydrogen exchanger YP_001500920.1 1281133 D 398579 CDS YP_001500921.1 157960887 5661458 complement(1282497..1284470) 1 NC_009901.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; KEGG: sbm:Shew185_1264 chorismate mutase; chorismate mutase 1284470 5661458 Spea_1059 Shewanella pealeana ATCC 700345 chorismate mutase YP_001500921.1 1282497 R 398579 CDS YP_001500922.1 157960888 5661459 complement(1284778..1285140) 1 NC_009901.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: slo:Shew_1073 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA 1285140 5661459 Spea_1060 Shewanella pealeana ATCC 700345 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001500922.1 1284778 R 398579 CDS YP_001500923.1 157960889 5661460 1285450..1286142 1 NC_009901.1 PFAM: cytochrome B561; KEGG: sbl:Sbal_1222 cytochrome b561; cytochrome B561 1286142 5661460 Spea_1061 Shewanella pealeana ATCC 700345 cytochrome B561 YP_001500923.1 1285450 D 398579 CDS YP_001500924.1 157960890 5661461 complement(1286241..1286702) 1 NC_009901.1 PFAM: cytochrome c class II; KEGG: slo:Shew_1075 cytochrome c, class II; cytochrome c class II 1286702 5661461 Spea_1062 Shewanella pealeana ATCC 700345 cytochrome c class II YP_001500924.1 1286241 R 398579 CDS YP_001500925.1 157960891 5661462 1286927..1287202 1 NC_009901.1 TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: slo:Shew_1076 Trp operon repressor; Trp operon repressor 1287202 5661462 Spea_1063 Shewanella pealeana ATCC 700345 Trp operon repressor YP_001500925.1 1286927 D 398579 CDS YP_001500926.1 157960892 5661463 complement(1287235..1287639) 1 NC_009901.1 KEGG: shn:Shewana3_1137 hypothetical protein; hypothetical protein 1287639 5661463 Spea_1064 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500926.1 1287235 R 398579 CDS YP_001500927.1 157960893 5661464 complement(1287793..1288452) 1 NC_009901.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_1078 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 1288452 5661464 Spea_1065 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001500927.1 1287793 R 398579 CDS YP_001500928.1 157960894 5661465 1289165..1291630 1 NC_009901.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 1291630 thrA 5661465 thrA Shewanella pealeana ATCC 700345 bifunctional aspartokinase I/homoserine dehydrogenase I YP_001500928.1 1289165 D 398579 CDS YP_001500929.1 157960895 5661466 1291627..1292562 1 NC_009901.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1292562 5661466 Spea_1067 Shewanella pealeana ATCC 700345 homoserine kinase YP_001500929.1 1291627 D 398579 CDS YP_001500930.1 157960896 5661467 1292605..1293891 1 NC_009901.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1293891 5661467 Spea_1068 Shewanella pealeana ATCC 700345 threonine synthase YP_001500930.1 1292605 D 398579 CDS YP_001500931.1 157960897 5661468 1294161..1294451 1 NC_009901.1 KEGG: sbm:Shew185_1274 hypothetical protein; hypothetical protein 1294451 5661468 Spea_1069 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500931.1 1294161 D 398579 CDS YP_001500932.1 157960898 5661469 complement(1294467..1295321) 1 NC_009901.1 KEGG: slo:Shew_1083 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; apurinic endonuclease Apn1 1295321 5661469 Spea_1070 Shewanella pealeana ATCC 700345 apurinic endonuclease Apn1 YP_001500932.1 1294467 R 398579 CDS YP_001500933.1 157960899 5661470 1295548..1296099 1 NC_009901.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: sfr:Sfri_2903 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation-binding domain-containing protein 1296099 5661470 Spea_1071 Shewanella pealeana ATCC 700345 hemerythrin HHE cation-binding domain-containing protein YP_001500933.1 1295548 D 398579 CDS YP_001500934.1 157960900 5661471 complement(1296160..1296345) 1 NC_009901.1 KEGG: son:SO_3548 hypothetical protein; hypothetical protein 1296345 5661471 Spea_1072 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500934.1 1296160 R 398579 CDS YP_001500935.1 157960901 5661472 complement(1296964..1298601) 1 NC_009901.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1298601 pgi 5661472 pgi Shewanella pealeana ATCC 700345 glucose-6-phosphate isomerase YP_001500935.1 1296964 R 398579 CDS YP_001500936.1 157960902 5661473 complement(1298619..1299575) 1 NC_009901.1 KEGG: slo:Shew_1089 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 1299575 5661473 Spea_1074 Shewanella pealeana ATCC 700345 transaldolase B YP_001500936.1 1298619 R 398579 CDS YP_001500937.1 157960903 5661474 complement(1299860..1300957) 1 NC_009901.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: slo:Shew_1090 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 1300957 5661474 Spea_1075 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001500937.1 1299860 R 398579 CDS YP_001500938.1 157960904 5661475 complement(1301193..1303559) 1 NC_009901.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: slo:Shew_1091 phosphoketolase; putative phosphoketolase 1303559 5661475 Spea_1076 Shewanella pealeana ATCC 700345 putative phosphoketolase YP_001500938.1 1301193 R 398579 CDS YP_001500939.1 157960905 5661476 1303980..1305461 1 NC_009901.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: son:SO_3541 sodium:alanine symporter family protein; amino acid carrier protein 1305461 5661476 Spea_1077 Shewanella pealeana ATCC 700345 amino acid carrier protein YP_001500939.1 1303980 D 398579 CDS YP_001500940.1 157960906 5661477 1305567..1306340 1 NC_009901.1 PFAM: protein of unknown function DUF328; KEGG: slo:Shew_1093 protein of unknown function DUF328; hypothetical protein 1306340 5661477 Spea_1078 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500940.1 1305567 D 398579 CDS YP_001500941.1 157960907 5661478 1306950..1307264 1 NC_009901.1 PFAM: regulatory protein ArsR; KEGG: saz:Sama_0920 transcriptional regulator HlyU; ArsR family transcriptional regulator 1307264 5661478 Spea_1079 Shewanella pealeana ATCC 700345 ArsR family transcriptional regulator YP_001500941.1 1306950 D 398579 CDS YP_001500942.1 157960908 5661479 complement(1307577..1307843) 1 NC_009901.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1307843 rpsT 5661479 rpsT Shewanella pealeana ATCC 700345 30S ribosomal protein S20 YP_001500942.1 1307577 R 398579 CDS YP_001500943.1 157960909 5661480 1308099..1309658 1 NC_009901.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: son:SO_3534 MviN protein; integral membrane protein MviN 1309658 5661480 Spea_1081 Shewanella pealeana ATCC 700345 integral membrane protein MviN YP_001500943.1 1308099 D 398579 CDS YP_001500944.1 157960910 5661481 1309724..1310659 1 NC_009901.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: slo:Shew_1098 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 1310659 5661481 Spea_1082 Shewanella pealeana ATCC 700345 riboflavin biosynthesis protein RibF YP_001500944.1 1309724 D 398579 CDS YP_001500945.1 157960911 5661482 1310691..1313513 1 NC_009901.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1313513 ileS 5661482 ileS Shewanella pealeana ATCC 700345 isoleucyl-tRNA synthetase YP_001500945.1 1310691 D 398579 CDS YP_001500946.1 157960912 5661483 1313634..1314146 1 NC_009901.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1314146 lspA 5661483 lspA Shewanella pealeana ATCC 700345 lipoprotein signal peptidase YP_001500946.1 1313634 D 398579 CDS YP_001500947.1 157960913 5661484 1314152..1314574 1 NC_009901.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_1101 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 1314574 5661484 Spea_1085 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001500947.1 1314152 D 398579 CDS YP_001500948.1 157960914 5661485 1314577..1315506 1 NC_009901.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1315506 ispH 5661485 ispH Shewanella pealeana ATCC 700345 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001500948.1 1314577 D 398579 CDS YP_001500949.1 157960915 5661486 1315749..1316309 1 NC_009901.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: son:SO_3528 type IV pilus assembly protein PilV; type IV pilus modification protein PilV 1316309 5661486 Spea_1087 Shewanella pealeana ATCC 700345 type IV pilus modification protein PilV YP_001500949.1 1315749 D 398579 CDS YP_001500950.1 157960916 5661487 1316314..1317303 1 NC_009901.1 KEGG: sbl:Sbal_1059 type IV pilus assembly protein PilW; type IV pilus assembly protein PilW 1317303 5661487 Spea_1088 Shewanella pealeana ATCC 700345 type IV pilus assembly protein PilW YP_001500950.1 1316314 D 398579 CDS YP_001500951.1 157960917 5661488 1317314..1317751 1 NC_009901.1 KEGG: sbm:Shew185_1127 type IV pilus assembly protein PilX; type IV pilus assembly protein PilX 1317751 5661488 Spea_1089 Shewanella pealeana ATCC 700345 type IV pilus assembly protein PilX YP_001500951.1 1317314 D 398579 CDS YP_001500952.1 157960918 5661489 1317754..1321338 1 NC_009901.1 KEGG: sdn:Sden_2716 type IV pilin biogenesis protein, putative; type IV pilin biogenesis protein 1321338 5661489 Spea_1090 Shewanella pealeana ATCC 700345 type IV pilin biogenesis protein YP_001500952.1 1317754 D 398579 CDS YP_001500953.1 157960919 5661490 1321347..1321739 1 NC_009901.1 KEGG: shw:Sputw3181_3098 methylation site containing protein; methylation site containing protein 1321739 5661490 Spea_1091 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001500953.1 1321347 D 398579 CDS YP_001500954.1 157960920 5661491 1321790..1322041 1 NC_009901.1 KEGG: she:Shewmr4_2948 hypothetical protein; hypothetical protein 1322041 5661491 Spea_1092 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500954.1 1321790 D 398579 CDS YP_001500955.1 157960921 5661492 complement(1322086..1322622) 1 NC_009901.1 KEGG: sdn:Sden_2713 type IV pilus biogenesis protein, putative; type IV pilus biogenesis protein 1322622 5661492 Spea_1093 Shewanella pealeana ATCC 700345 type IV pilus biogenesis protein YP_001500955.1 1322086 R 398579 CDS YP_001500956.1 157960922 5661493 complement(1322785..1323297) 1 NC_009901.1 KEGG: slo:Shew_1109 type IV pilus biogenesis protein, putative; type IV pilus biogenesis protein 1323297 5661493 Spea_1094 Shewanella pealeana ATCC 700345 type IV pilus biogenesis protein YP_001500956.1 1322785 R 398579 CDS YP_001500957.1 157960923 5661494 1323545..1323883 1 NC_009901.1 PFAM: nitrogen regulatory protein P-II; KEGG: saz:Sama_0935 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1323883 5661494 Spea_1095 Shewanella pealeana ATCC 700345 nitrogen regulatory protein P-II YP_001500957.1 1323545 D 398579 CDS YP_001500958.1 157960924 5661495 complement(1323979..1324995) 1 NC_009901.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: saz:Sama_0937 transcriptional regulator, LacI family; LacI family transcriptional regulator 1324995 5661495 Spea_1096 Shewanella pealeana ATCC 700345 LacI family transcriptional regulator YP_001500958.1 1323979 R 398579 CDS YP_001500959.1 157960925 5661496 1325416..1328025 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_1112 TonB-dependent receptor; TonB-dependent receptor 1328025 5661496 Spea_1097 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001500959.1 1325416 D 398579 CDS YP_001500960.1 157960926 5661497 1328192..1329718 1 NC_009901.1 PFAM: tryptophan halogenase; KEGG: slo:Shew_1113 tryptophan halogenase; tryptophan halogenase 1329718 5661497 Spea_1098 Shewanella pealeana ATCC 700345 tryptophan halogenase YP_001500960.1 1328192 D 398579 CDS YP_001500961.1 157960927 5661498 complement(1329785..1330513) 1 NC_009901.1 PFAM: SapC family protein; KEGG: slo:Shew_1114 SapC family protein; SapC family protein 1330513 5661498 Spea_1099 Shewanella pealeana ATCC 700345 SapC family protein YP_001500961.1 1329785 R 398579 CDS YP_001500962.1 157960928 5661499 1331282..1334002 1 NC_009901.1 PFAM: Carbohydrate-binding chitobiase/hexosaminidase-type domain protein; glycoside hydrolase family 20 domain protein; Glycoside hydrolase, family 20, catalytic core; KEGG: spc:Sputcn32_1075 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 1334002 5661499 Spea_1100 Shewanella pealeana ATCC 700345 beta-N-acetylhexosaminidase YP_001500962.1 1331282 D 398579 CDS YP_001500963.1 157960929 5661500 1334240..1335136 1 NC_009901.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: she:Shewmr4_2935 ATPase, BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase 1335136 5661500 Spea_1101 Shewanella pealeana ATCC 700345 BadF/BadG/BcrA/BcrD type ATPase YP_001500963.1 1334240 D 398579 CDS YP_001500964.1 157960930 5661501 1335168..1336301 1 NC_009901.1 KEGG: son:SO_3505 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 1336301 5661501 Spea_1102 Shewanella pealeana ATCC 700345 N-acetylglucosamine-6-phosphate deacetylase YP_001500964.1 1335168 D 398579 CDS YP_001500965.1 157960931 5661502 1336417..1337601 1 NC_009901.1 KEGG: slo:Shew_1118 hypothetical protein; hypothetical protein 1337601 5661502 Spea_1103 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500965.1 1336417 D 398579 CDS YP_001500966.1 157960932 5661503 1337892..1339205 1 NC_009901.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: saz:Sama_0948 multiple antibiotic resistance (MarC)-related protein; glucose/galactose transporter 1339205 5661503 Spea_1104 Shewanella pealeana ATCC 700345 glucose/galactose transporter YP_001500966.1 1337892 D 398579 CDS YP_001500967.1 157960933 5664691 1341198..1341596 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 1341596 5664691 Spea_1105 Shewanella pealeana ATCC 700345 transposase YP_001500967.1 1341198 D 398579 CDS YP_001500968.1 157960934 5661505 1341680..1342432 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 1342432 5661505 Spea_1106 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001500968.1 1341680 D 398579 CDS YP_001500969.1 157960935 5664693 complement(1343112..1343390) 1 NC_009901.1 PFAM: Fe(II) trafficking protein YggX; KEGG: slo:Shew_1122 Fe(II) trafficking protein YggX; hypothetical protein 1343390 5664693 Spea_1107 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500969.1 1343112 R 398579 CDS YP_001500970.1 157960936 5661507 complement(1343393..1344457) 1 NC_009901.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: she:Shewmr4_1180 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 1344457 5661507 Spea_1108 Shewanella pealeana ATCC 700345 A/G-specific adenine glycosylase YP_001500970.1 1343393 R 398579 CDS YP_001500971.1 157960937 5661508 1344730..1345443 1 NC_009901.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1345443 trmB 5661508 trmB Shewanella pealeana ATCC 700345 tRNA (guanine-N(7)-)-methyltransferase YP_001500971.1 1344730 D 398579 CDS YP_001500972.1 157960938 5661509 1345494..1345820 1 NC_009901.1 PFAM: protein of unknown function DUF469; KEGG: sdn:Sden_2696 protein of unknown function DUF469; hypothetical protein 1345820 5661509 Spea_1110 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500972.1 1345494 D 398579 CDS YP_001500973.1 157960939 5661510 1345820..1346734 1 NC_009901.1 catalyzes the formation of glutamate from glutamine; glutaminase 1346734 5661510 Spea_1111 Shewanella pealeana ATCC 700345 glutaminase YP_001500973.1 1345820 D 398579 CDS YP_001500974.1 157960940 5661511 1346968..1347783 1 NC_009901.1 KEGG: slo:Shew_1127 hypothetical protein; hypothetical protein 1347783 5661511 Spea_1112 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500974.1 1346968 D 398579 CDS YP_001500975.1 157960941 5661512 1348137..1349078 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_1128 transcriptional regulator, LysR family; LysR family transcriptional regulator 1349078 5661512 Spea_1113 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500975.1 1348137 D 398579 CDS YP_001500976.1 157960942 5661513 1349870..1350886 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 1350886 5661513 Spea_1114 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001500976.1 1349870 D 398579 CDS YP_001500977.1 157960943 5661514 1351573..1351833 1 NC_009901.1 hypothetical protein 1351833 5661514 Spea_1115 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500977.1 1351573 D 398579 CDS YP_001500978.1 157960944 5661515 1352097..1354082 1 NC_009901.1 hypothetical protein 1354082 5661515 Spea_1116 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500978.1 1352097 D 398579 CDS YP_001500979.1 157960945 5661516 complement(1354169..1355326) 1 NC_009901.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: cps:CPS_3436 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 1355326 5661516 Spea_1117 Shewanella pealeana ATCC 700345 C4-dicarboxylate transporter/malic acid transport protein YP_001500979.1 1354169 R 398579 CDS YP_001500980.1 157960946 5661517 1355486..1356382 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vvy:VVA1368 putative transcriptional regulator; LysR family transcriptional regulator 1356382 5661517 Spea_1118 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500980.1 1355486 D 398579 CDS YP_001500981.1 157960947 5661518 complement(1356467..1358125) 1 NC_009901.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: lpn:lpg1202 cytochrome D ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1358125 5661518 Spea_1119 Shewanella pealeana ATCC 700345 cytochrome bd ubiquinol oxidase subunit I YP_001500981.1 1356467 R 398579 CDS YP_001500982.1 157960948 5661519 complement(1358352..1360235) 1 NC_009901.1 PFAM: protein of unknown function DUF885; KEGG: sbl:Sbal_3032 protein of unknown function DUF885; hypothetical protein 1360235 5661519 Spea_1120 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500982.1 1358352 R 398579 CDS YP_001500983.1 157960949 5661520 complement(1360391..1361527) 1 NC_009901.1 KEGG: sfr:Sfri_2866 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 1361527 5661520 Spea_1121 Shewanella pealeana ATCC 700345 putative oxygen-independent coproporphyrinogen III oxidase YP_001500983.1 1360391 R 398579 CDS YP_001500984.1 157960950 5661521 complement(1361527..1362126) 1 NC_009901.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 1362126 5661521 Spea_1122 Shewanella pealeana ATCC 700345 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001500984.1 1361527 R 398579 CDS YP_001500985.1 157960951 5661522 complement(1362253..1362687) 1 NC_009901.1 KEGG: slo:Shew_1133 hypothetical protein; hypothetical protein 1362687 5661522 Spea_1123 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500985.1 1362253 R 398579 CDS YP_001500986.1 157960952 5661523 complement(1362771..1363043) 1 NC_009901.1 PFAM: protein of unknown function DUF167; KEGG: she:Shewmr4_1190 hypothetical protein; hypothetical protein 1363043 5661523 Spea_1124 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500986.1 1362771 R 398579 CDS YP_001500987.1 157960953 5661524 complement(1363058..1363606) 1 NC_009901.1 PFAM: protein of unknown function YGGT; KEGG: slo:Shew_1135 protein of unknown function YGGT; hypothetical protein 1363606 5661524 Spea_1125 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500987.1 1363058 R 398579 CDS YP_001500988.1 157960954 5661525 complement(1363642..1364460) 1 NC_009901.1 KEGG: sfr:Sfri_2861 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; pyrroline-5-carboxylate reductase 1364460 5661525 Spea_1126 Shewanella pealeana ATCC 700345 pyrroline-5-carboxylate reductase YP_001500988.1 1363642 R 398579 CDS YP_001500989.1 157960955 5661526 complement(1364663..1365364) 1 NC_009901.1 PFAM: alanine racemase domain protein; KEGG: shw:Sputw3181_1324 alanine racemase domain protein; alanine racemase domain-containing protein 1365364 5661526 Spea_1127 Shewanella pealeana ATCC 700345 alanine racemase domain-containing protein YP_001500989.1 1364663 R 398579 CDS YP_001500990.1 157960956 5661527 1365400..1366437 1 NC_009901.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: slo:Shew_1138 twitching motility protein; twitching motility protein 1366437 5661527 Spea_1128 Shewanella pealeana ATCC 700345 twitching motility protein YP_001500990.1 1365400 D 398579 CDS YP_001500991.1 157960957 5661528 1366461..1367573 1 NC_009901.1 KEGG: shw:Sputw3181_1326 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein 1367573 5661528 Spea_1129 Shewanella pealeana ATCC 700345 twitching motility protein YP_001500991.1 1366461 D 398579 CDS YP_001500992.1 157960958 5661529 1367696..1368709 1 NC_009901.1 PFAM: ferrochelatase; KEGG: sfr:Sfri_2852 ferrochelatase; ferrochelatase 1368709 5661529 Spea_1130 Shewanella pealeana ATCC 700345 ferrochelatase YP_001500992.1 1367696 D 398579 CDS YP_001500993.1 157960959 5661530 complement(1368868..1369293) 1 NC_009901.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1369293 5661530 Spea_1131 Shewanella pealeana ATCC 700345 Holliday junction resolvase-like protein YP_001500993.1 1368868 R 398579 CDS YP_001500994.1 157960960 5661531 complement(1369332..1369904) 1 NC_009901.1 PFAM: protein of unknown function DUF179; KEGG: sfr:Sfri_2850 protein of unknown function DUF179; hypothetical protein 1369904 5661531 Spea_1132 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500994.1 1369332 R 398579 CDS YP_001500995.1 157960961 5661532 complement(1369917..1370246) 1 NC_009901.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 1370246 5661532 Spea_1133 Shewanella pealeana ATCC 700345 translation initiation factor Sui1 YP_001500995.1 1369917 R 398579 CDS YP_001500996.1 157960962 5661533 complement(1370648..1370980) 1 NC_009901.1 KEGG: sbl:Sbal_3017 hypothetical protein; hypothetical protein 1370980 5661533 Spea_1134 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500996.1 1370648 R 398579 CDS YP_001500997.1 157960963 5661534 1371140..1371697 1 NC_009901.1 KEGG: slo:Shew_1147 hypothetical protein; hypothetical protein 1371697 5661534 Spea_1135 Shewanella pealeana ATCC 700345 hypothetical protein YP_001500997.1 1371140 D 398579 CDS YP_001500998.1 157960964 5661535 complement(1371822..1372700) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_0421 transcription regulator, LysR family; LysR family transcriptional regulator 1372700 5661535 Spea_1136 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001500998.1 1371822 R 398579 CDS YP_001500999.1 157960965 5661536 1372784..1373197 1 NC_009901.1 PFAM: transmembrane pair domain protein; KEGG: vha:VIBHAR_01850 hypothetical protein; transmembrane pair domain-containing protein 1373197 5661536 Spea_1137 Shewanella pealeana ATCC 700345 transmembrane pair domain-containing protein YP_001500999.1 1372784 D 398579 CDS YP_001501000.1 157960966 5661537 1373454..1375412 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_2240 receptor, putative; TonB-dependent receptor plug 1375412 5661537 Spea_1138 Shewanella pealeana ATCC 700345 TonB-dependent receptor plug YP_001501000.1 1373454 D 398579 CDS YP_001501001.1 157960967 5661538 1375692..1376288 1 NC_009901.1 PFAM: OmpA/MotB domain protein; KEGG: sbm:Shew185_3027 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 1376288 5661538 Spea_1139 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001501001.1 1375692 D 398579 CDS YP_001501002.1 157960968 5661539 1376318..1377142 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: slo:Shew_1152 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 1377142 5661539 Spea_1140 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001501002.1 1376318 D 398579 CDS YP_001501003.1 157960969 5661540 complement(1377216..1377854) 1 NC_009901.1 PFAM: protein of unknown function UPF0126; KEGG: sfr:Sfri_0596 protein of unknown function UPF0126; hypothetical protein 1377854 5661540 Spea_1141 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501003.1 1377216 R 398579 CDS YP_001501004.1 157960970 5661541 1378189..1379205 1 NC_009901.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sbm:Shew185_3026 threonine aldolase; threonine aldolase 1379205 5661541 Spea_1142 Shewanella pealeana ATCC 700345 threonine aldolase YP_001501004.1 1378189 D 398579 CDS YP_001501005.1 157960971 5661542 complement(1379729..1380616) 1 NC_009901.1 KEGG: she:Shewmr4_3368 hypothetical protein; hypothetical protein 1380616 5661542 Spea_1143 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501005.1 1379729 R 398579 CDS YP_001501006.1 157960972 5661543 complement(1380744..1382351) 1 NC_009901.1 PFAM: Alkaline phosphatase; KEGG: slo:Shew_1157 alkaline phosphatase; alkaline phosphatase 1382351 5661543 Spea_1144 Shewanella pealeana ATCC 700345 alkaline phosphatase YP_001501006.1 1380744 R 398579 CDS YP_001501007.1 157960973 5661544 complement(1382441..1383940) 1 NC_009901.1 PFAM: Alkaline phosphatase; KEGG: slo:Shew_1158 alkaline phosphatase; alkaline phosphatase 1383940 5661544 Spea_1145 Shewanella pealeana ATCC 700345 alkaline phosphatase YP_001501007.1 1382441 R 398579 CDS YP_001501008.1 157960974 5661545 complement(1384243..1384452) 1 NC_009901.1 KEGG: slo:Shew_1160 hypothetical protein; hypothetical protein 1384452 5661545 Spea_1146 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501008.1 1384243 R 398579 CDS YP_001501009.1 157960975 5661546 complement(1385120..1385515) 1 NC_009901.1 KEGG: rme:Rmet_6285 hypothetical protein; hypothetical protein 1385515 5661546 Spea_1147 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501009.1 1385120 R 398579 CDS YP_001501010.1 157960976 5661547 complement(1386127..1387428) 1 NC_009901.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slo:Shew_1161 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1387428 5661547 Spea_1148 Shewanella pealeana ATCC 700345 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001501010.1 1386127 R 398579 CDS YP_001501011.1 157960977 5661548 complement(1387838..1388200) 1 NC_009901.1 KEGG: slo:Shew_1162 hypothetical protein; hypothetical protein 1388200 5661548 Spea_1149 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501011.1 1387838 R 398579 CDS YP_001501012.1 157960978 5661549 1388659..1389813 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_1163 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1389813 5661549 Spea_1150 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501012.1 1388659 D 398579 CDS YP_001501013.1 157960979 5661550 1390070..1393201 1 NC_009901.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: slo:Shew_1164 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 1393201 5661550 Spea_1151 Shewanella pealeana ATCC 700345 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001501013.1 1390070 D 398579 CDS YP_001501014.1 157960980 5661551 complement(1393696..1394844) 1 NC_009901.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: slo:Shew_1166 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1394844 5661551 Spea_1152 Shewanella pealeana ATCC 700345 iron-containing alcohol dehydrogenase YP_001501014.1 1393696 R 398579 CDS YP_001501015.1 157960981 5661552 complement(1394863..1395291) 1 NC_009901.1 hypothetical protein 1395291 5661552 Spea_1153 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501015.1 1394863 R 398579 CDS YP_001501016.1 157960982 5661553 complement(1395486..1395959) 1 NC_009901.1 PFAM: protein of unknown function DUF88; KEGG: sbm:Shew185_3175 protein of unknown function DUF88; hypothetical protein 1395959 5661553 Spea_1154 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501016.1 1395486 R 398579 CDS YP_001501017.1 157960983 5661554 complement(1396442..1399552) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: sbl:Sbal_3171 acriflavin resistance protein; acriflavin resistance protein 1399552 5661554 Spea_1155 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501017.1 1396442 R 398579 CDS YP_001501018.1 157960984 5661555 complement(1399553..1400665) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shw:Sputw3181_1226 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1400665 5661555 Spea_1156 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501018.1 1399553 R 398579 CDS YP_001501019.1 157960985 5661556 complement(1401104..1402186) 1 NC_009901.1 PFAM: metallophosphoesterase; KEGG: shn:Shewana3_1086 metallophosphoesterase; metallophosphoesterase 1402186 5661556 Spea_1157 Shewanella pealeana ATCC 700345 metallophosphoesterase YP_001501019.1 1401104 R 398579 CDS YP_001501020.1 157960986 5661557 complement(1402275..1403432) 1 NC_009901.1 PFAM: acyltransferase 3; KEGG: vvy:VVA1443 hypothetical protein; acyltransferase 3 1403432 5661557 Spea_1158 Shewanella pealeana ATCC 700345 acyltransferase 3 YP_001501020.1 1402275 R 398579 CDS YP_001501021.1 157960987 5661558 complement(1403683..1405350) 1 NC_009901.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1405350 5661558 Spea_1159 Shewanella pealeana ATCC 700345 putative ABC transporter ATP-binding protein YP_001501021.1 1403683 R 398579 CDS YP_001501022.1 157960988 5661559 1405628..1406884 1 NC_009901.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1406884 glyA 5661559 glyA Shewanella pealeana ATCC 700345 serine hydroxymethyltransferase YP_001501022.1 1405628 D 398579 CDS YP_001501023.1 157960989 5661560 1407071..1407520 1 NC_009901.1 PFAM: ATP-cone domain protein; KEGG: slo:Shew_1186 ATP-cone domain protein; transcriptional regulator NrdR 1407520 nrdR 5661560 nrdR Shewanella pealeana ATCC 700345 transcriptional regulator NrdR YP_001501023.1 1407071 D 398579 CDS YP_001501024.1 157960990 5661561 1407589..1408710 1 NC_009901.1 KEGG: she:Shewmr4_1096 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 1408710 5661561 Spea_1162 Shewanella pealeana ATCC 700345 riboflavin biosynthesis protein RibD YP_001501024.1 1407589 D 398579 CDS YP_001501025.1 157960991 5661562 1408714..1409379 1 NC_009901.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1409379 5661562 Spea_1163 Shewanella pealeana ATCC 700345 riboflavin synthase subunit alpha YP_001501025.1 1408714 D 398579 CDS YP_001501026.1 157960992 5661563 1409517..1410620 1 NC_009901.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: slo:Shew_1189 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1410620 5661563 Spea_1164 Shewanella pealeana ATCC 700345 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001501026.1 1409517 D 398579 CDS YP_001501027.1 157960993 5661564 1410766..1411242 1 NC_009901.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1411242 ribH 5661564 ribH Shewanella pealeana ATCC 700345 6,7-dimethyl-8-ribityllumazine synthase YP_001501027.1 1410766 D 398579 CDS YP_001501028.1 157960994 5661565 1411257..1411664 1 NC_009901.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1411664 nusB 5661565 nusB Shewanella pealeana ATCC 700345 transcription antitermination protein NusB YP_001501028.1 1411257 D 398579 CDS YP_001501029.1 157960995 5661566 1411838..1412797 1 NC_009901.1 KEGG: shw:Sputw3181_1239 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 1412797 5661566 Spea_1167 Shewanella pealeana ATCC 700345 thiamine-monophosphate kinase YP_001501029.1 1411838 D 398579 CDS YP_001501030.1 157960996 5661567 1412797..1413291 1 NC_009901.1 PFAM: phosphatidylglycerophosphatase A; KEGG: sbm:Shew185_3152 phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase A 1413291 5661567 Spea_1168 Shewanella pealeana ATCC 700345 phosphatidylglycerophosphatase A YP_001501030.1 1412797 D 398579 CDS YP_001501031.1 157960997 5661568 complement(1413389..1415050) 1 NC_009901.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: slo:Shew_1196 DNA repair protein RecN; recombination and repair protein 1415050 5661568 Spea_1169 Shewanella pealeana ATCC 700345 recombination and repair protein YP_001501031.1 1413389 R 398579 CDS YP_001501032.1 157960998 5661569 complement(1416201..1417217) 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 1417217 5661569 Spea_1170 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001501032.1 1416201 R 398579 CDS YP_001501033.1 157960999 5661570 1417740..1420280 1 NC_009901.1 PFAM: AAA-4 family protein; KEGG: bja:blr0871 hypothetical protein; putative transcriptional regulator 1420280 5661570 Spea_1171 Shewanella pealeana ATCC 700345 putative transcriptional regulator YP_001501033.1 1417740 D 398579 CDS YP_001501034.1 157961000 5661571 complement(1421146..1421907) 1 NC_009901.1 PFAM: Pirin domain protein; KEGG: cps:CPS_1295 conserved hypothetical protein; pirin domain-containing protein 1421907 5661571 Spea_1172 Shewanella pealeana ATCC 700345 pirin domain-containing protein YP_001501034.1 1421146 R 398579 CDS YP_001501035.1 157961001 5661572 complement(1422022..1423005) 1 NC_009901.1 KEGG: cps:CPS_1775 putative glutathione S-transferase; putative glutathione S-transferase 1423005 5661572 Spea_1173 Shewanella pealeana ATCC 700345 putative glutathione S-transferase YP_001501035.1 1422022 R 398579 CDS YP_001501036.1 157961002 5661573 complement(1423068..1423517) 1 NC_009901.1 PFAM: DoxX family protein; KEGG: pha:PSHAb0104 putative membrane DoxD-like family protein; DoxX family protein 1423517 5661573 Spea_1174 Shewanella pealeana ATCC 700345 DoxX family protein YP_001501036.1 1423068 R 398579 CDS YP_001501037.1 157961003 5661574 1423734..1424648 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pha:PSHAb0105 putative transcriptional regulator (LysR family); LysR family transcriptional regulator 1424648 5661574 Spea_1175 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501037.1 1423734 D 398579 CDS YP_001501038.1 157961004 5661575 complement(1424789..1426411) 1 NC_009901.1 PFAM: response regulator receiver; KEGG: vha:VIBHAR_06171 hypothetical protein; response regulator receiver protein 1426411 5661575 Spea_1176 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001501038.1 1424789 R 398579 CDS YP_001501039.1 157961005 5661576 complement(1426483..1428723) 1 NC_009901.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: vha:VIBHAR_06169 hypothetical protein; Hpt sensor hybrid histidine kinase 1428723 5661576 Spea_1177 Shewanella pealeana ATCC 700345 Hpt sensor hybrid histidine kinase YP_001501039.1 1426483 R 398579 CDS YP_001501040.1 157961006 5661577 1428958..1429860 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: son:SO_3460 transcriptional regulator, LysR family; LysR family transcriptional regulator 1429860 5661577 Spea_1178 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501040.1 1428958 D 398579 CDS YP_001501041.1 157961007 5661578 complement(1429957..1430562) 1 NC_009901.1 PFAM: protein of unknown function DUF416; KEGG: slo:Shew_1199 protein of unknown function DUF416; hypothetical protein 1430562 5661578 Spea_1179 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501041.1 1429957 R 398579 CDS YP_001501042.1 157961008 5661579 complement(1430564..1433353) 1 NC_009901.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 1433353 5661579 Spea_1180 Shewanella pealeana ATCC 700345 hybrid sensory histidine kinase BarA YP_001501042.1 1430564 R 398579 CDS YP_001501043.1 157961009 5661580 1433451..1434788 1 NC_009901.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1434788 rumA 5661580 rumA Shewanella pealeana ATCC 700345 23S rRNA 5-methyluridine methyltransferase YP_001501043.1 1433451 D 398579 CDS YP_001501044.1 157961010 5661581 1435005..1437212 1 NC_009901.1 KEGG: slo:Shew_1202 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA 1437212 5661581 Spea_1182 Shewanella pealeana ATCC 700345 (p)ppGpp synthetase I SpoT/RelA YP_001501044.1 1435005 D 398579 CDS YP_001501045.1 157961011 5661582 1437311..1438114 1 NC_009901.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 1438114 mazG 5661582 mazG Shewanella pealeana ATCC 700345 nucleoside triphosphate pyrophosphohydrolase YP_001501045.1 1437311 D 398579 CDS YP_001501046.1 157961012 5661583 1438230..1439870 1 NC_009901.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1439870 pyrG 5661583 pyrG Shewanella pealeana ATCC 700345 CTP synthetase YP_001501046.1 1438230 D 398579 CDS YP_001501047.1 157961013 5661584 1439995..1441290 1 NC_009901.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1441290 eno 5661584 eno Shewanella pealeana ATCC 700345 phosphopyruvate hydratase YP_001501047.1 1439995 D 398579 CDS YP_001501048.1 157961014 5661585 1441381..1441677 1 NC_009901.1 PFAM: Septum formation initiator; KEGG: slo:Shew_1206 septum formation initiator; septum formation initiator 1441677 5661585 Spea_1186 Shewanella pealeana ATCC 700345 septum formation initiator YP_001501048.1 1441381 D 398579 CDS YP_001501049.1 157961015 5661586 1441729..1442424 1 NC_009901.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1442424 ispD 5661586 ispD Shewanella pealeana ATCC 700345 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001501049.1 1441729 D 398579 CDS YP_001501050.1 157961016 5661587 1442477..1442956 1 NC_009901.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1442956 ispF 5661587 ispF Shewanella pealeana ATCC 700345 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001501050.1 1442477 D 398579 CDS YP_001501051.1 157961017 5661588 1443055..1444119 1 NC_009901.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: sbl:Sbal_3123 pseudouridylate synthase; tRNA pseudouridine synthase D TruD 1444119 5661588 Spea_1189 Shewanella pealeana ATCC 700345 tRNA pseudouridine synthase D TruD YP_001501051.1 1443055 D 398579 CDS YP_001501052.1 157961018 5661589 1444116..1444868 1 NC_009901.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1444868 surE 5661589 surE Shewanella pealeana ATCC 700345 stationary phase survival protein SurE YP_001501052.1 1444116 D 398579 CDS YP_001501053.1 157961019 5661590 1445346..1445981 1 NC_009901.1 KEGG: sdn:Sden_1202 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1445981 5661590 Spea_1191 Shewanella pealeana ATCC 700345 protein-L-isoaspartate O-methyltransferase YP_001501053.1 1445346 D 398579 CDS YP_001501054.1 157961020 5661591 1446069..1446959 1 NC_009901.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: slo:Shew_1212 peptidase M23B; peptidase M23B 1446959 5661591 Spea_1192 Shewanella pealeana ATCC 700345 peptidase M23B YP_001501054.1 1446069 D 398579 CDS YP_001501055.1 157961021 5661592 1447036..1448004 1 NC_009901.1 TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma-70; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: slo:Shew_1213 RNA polymerase, sigma 70 subunit, RpoD family; RpoD family RNA polymerase sigma factor 1448004 5661592 Spea_1193 Shewanella pealeana ATCC 700345 RpoD family RNA polymerase sigma factor YP_001501055.1 1447036 D 398579 CDS YP_001501056.1 157961022 5661593 complement(1448117..1450696) 1 NC_009901.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1450696 5661593 Spea_1194 Shewanella pealeana ATCC 700345 DNA mismatch repair protein MutS YP_001501056.1 1448117 R 398579 CDS YP_001501057.1 157961023 5661594 1451017..1452084 1 NC_009901.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1452084 recA 5661594 recA Shewanella pealeana ATCC 700345 recombinase A YP_001501057.1 1451017 D 398579 CDS YP_001501058.1 157961024 5661595 1452516..1455143 1 NC_009901.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1455143 alaS 5661595 alaS Shewanella pealeana ATCC 700345 alanyl-tRNA synthetase YP_001501058.1 1452516 D 398579 CDS YP_001501059.1 157961025 5661596 1455613..1455810 1 NC_009901.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 1455810 5661596 Spea_1197 Shewanella pealeana ATCC 700345 carbon storage regulator YP_001501059.1 1455613 D 398579 CDS YP_001501060.1 157961026 5664703 1458872..1459117 1 NC_009901.1 TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; KEGG: sfr:Sfri_1065 sodium pump decarboxylases, gamma subunit; sodium pump decarboxylase subunit gamma 1459117 5664703 Spea_1198 Shewanella pealeana ATCC 700345 sodium pump decarboxylase subunit gamma YP_001501060.1 1458872 D 398579 CDS YP_001501061.1 157961027 5661598 1459138..1460949 1 NC_009901.1 catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 1460949 5661598 Spea_1199 Shewanella pealeana ATCC 700345 oxaloacetate decarboxylase YP_001501061.1 1459138 D 398579 CDS YP_001501062.1 157961028 5661599 1460958..1462088 1 NC_009901.1 KEGG: sfr:Sfri_1067 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 1462088 5661599 Spea_1200 Shewanella pealeana ATCC 700345 sodium ion-translocating decarboxylase subunit beta YP_001501062.1 1460958 D 398579 CDS YP_001501063.1 157961029 5661600 1462229..1463170 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: csa:Csal_1188 transcriptional regulator, LysR family; LysR family transcriptional regulator 1463170 5661600 Spea_1201 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501063.1 1462229 D 398579 CDS YP_001501064.1 157961030 5661601 1463402..1464508 1 NC_009901.1 PFAM: Porphyromonas-type peptidyl-arginine deiminase; KEGG: pen:PSEEN2191 porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 1464508 5661601 Spea_1202 Shewanella pealeana ATCC 700345 agmatine deiminase YP_001501064.1 1463402 D 398579 CDS YP_001501065.1 157961031 5661602 1464553..1465638 1 NC_009901.1 PFAM: extracellular solute-binding protein family 1; KEGG: pen:PSEEN2900 putrescine ABC transporter, periplasmic putrescine-binding protein; extracellular solute-binding protein 1465638 5661602 Spea_1203 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001501065.1 1464553 D 398579 CDS YP_001501066.1 157961032 5661603 1465721..1466593 1 NC_009901.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: vpa:VP1774 putative carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1466593 5661603 Spea_1204 Shewanella pealeana ATCC 700345 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001501066.1 1465721 D 398579 CDS YP_001501067.1 157961033 5661604 complement(1466713..1466898) 1 NC_009901.1 KEGG: slo:Shew_1223 hypothetical protein; hypothetical protein 1466898 5661604 Spea_1205 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501067.1 1466713 R 398579 CDS YP_001501068.1 157961034 5661605 complement(1467001..1468251) 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: slo:Shew_1224 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1468251 5661605 Spea_1206 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001501068.1 1467001 R 398579 CDS YP_001501069.1 157961035 5661606 1468994..1471831 1 NC_009901.1 PFAM: peptidase M16 domain protein; KEGG: slo:Shew_1226 peptidase M16 domain protein; peptidase M16 domain-containing protein 1471831 5661606 Spea_1207 Shewanella pealeana ATCC 700345 peptidase M16 domain-containing protein YP_001501069.1 1468994 D 398579 CDS YP_001501070.1 157961036 5661607 1472008..1473576 1 NC_009901.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 1473576 5661607 Spea_1208 Shewanella pealeana ATCC 700345 glutamate--cysteine ligase YP_001501070.1 1472008 D 398579 CDS YP_001501071.1 157961037 5661608 1473579..1474019 1 NC_009901.1 KEGG: son:SO_3558 hypothetical protein; hypothetical protein 1474019 5661608 Spea_1209 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501071.1 1473579 D 398579 CDS YP_001501072.1 157961038 5661609 1474143..1474760 1 NC_009901.1 KEGG: slo:Shew_1229 hypothetical protein; hypothetical protein 1474760 5661609 Spea_1210 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501072.1 1474143 D 398579 CDS YP_001501073.1 157961039 5661610 1475309..1475812 1 NC_009901.1 KEGG: slo:Shew_1230 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1475812 5661610 Spea_1211 Shewanella pealeana ATCC 700345 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001501073.1 1475309 D 398579 CDS YP_001501074.1 157961040 5661611 1475962..1476579 1 NC_009901.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: sbl:Sbal_1039 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 1476579 5661611 Spea_1212 Shewanella pealeana ATCC 700345 ECF subfamily RNA polymerase sigma-24 factor YP_001501074.1 1475962 D 398579 CDS YP_001501075.1 157961041 5661612 1476569..1477135 1 NC_009901.1 KEGG: slo:Shew_1232 hypothetical protein; hypothetical protein 1477135 5661612 Spea_1213 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501075.1 1476569 D 398579 CDS YP_001501076.1 157961042 5661613 complement(1477295..1477711) 1 NC_009901.1 KEGG: shn:Shewana3_2001 hypothetical protein; hypothetical protein 1477711 5661613 Spea_1214 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501076.1 1477295 R 398579 CDS YP_001501077.1 157961043 5661614 1477930..1481208 1 NC_009901.1 PFAM: peptidase S41; WD40 domain protein beta Propeller; KEGG: slo:Shew_1234 peptidase S41; peptidase S41 1481208 5661614 Spea_1215 Shewanella pealeana ATCC 700345 peptidase S41 YP_001501077.1 1477930 D 398579 CDS YP_001501078.1 157961044 5661615 1481454..1482605 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: ppr:PBPRB1792 hypothetical secretion protein; secretion protein HlyD family protein 1482605 5661615 Spea_1216 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001501078.1 1481454 D 398579 CDS YP_001501079.1 157961045 5661616 1482595..1483665 1 NC_009901.1 KEGG: ppr:PBPRB1793 hypothetical protein; hypothetical protein 1483665 5661616 Spea_1217 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501079.1 1482595 D 398579 CDS YP_001501080.1 157961046 5661617 1483957..1484541 1 NC_009901.1 KEGG: slo:Shew_2686 putative lipoprotein; putative lipoprotein 1484541 5661617 Spea_1218 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001501080.1 1483957 D 398579 CDS YP_001501081.1 157961047 5661618 complement(1484621..1485064) 1 NC_009901.1 PFAM: OsmC family protein; KEGG: sbm:Shew185_1278 OsmC family protein; OsmC family protein 1485064 5661618 Spea_1219 Shewanella pealeana ATCC 700345 OsmC family protein YP_001501081.1 1484621 R 398579 CDS YP_001501082.1 157961048 5661619 complement(1485341..1485868) 1 NC_009901.1 KEGG: sbl:Sbal_1233 hypothetical protein; hypothetical protein 1485868 5661619 Spea_1220 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501082.1 1485341 R 398579 CDS YP_001501083.1 157961049 5661620 complement(1486118..1486444) 1 NC_009901.1 KEGG: sbm:Shew185_1279 hypothetical protein; hypothetical protein 1486444 5661620 Spea_1221 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501083.1 1486118 R 398579 CDS YP_001501084.1 157961050 5661621 complement(1486448..1488091) 1 NC_009901.1 PFAM: PepSY-associated TM helix domain protein; KEGG: spc:Sputcn32_2728 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 1488091 5661621 Spea_1222 Shewanella pealeana ATCC 700345 PepSY-associated TM helix domain-containing protein YP_001501084.1 1486448 R 398579 CDS YP_001501085.1 157961051 5661622 complement(1488095..1488406) 1 NC_009901.1 KEGG: sbl:Sbal_0110 hypothetical protein; hypothetical protein 1488406 5661622 Spea_1223 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501085.1 1488095 R 398579 CDS YP_001501086.1 157961052 5661623 1488993..1489349 1 NC_009901.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: slo:Shew_1241 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/30S ribosomal protein S30EA 1489349 5661623 Spea_1224 Shewanella pealeana ATCC 700345 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001501086.1 1488993 D 398579 CDS YP_001501087.1 157961053 5661624 complement(1489454..1491382) 1 NC_009901.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: vha:VIBHAR_05273 hypothetical protein; potassium efflux system protein 1491382 5661624 Spea_1225 Shewanella pealeana ATCC 700345 potassium efflux system protein YP_001501087.1 1489454 R 398579 CDS YP_001501088.1 157961054 5661625 complement(1491385..1492005) 1 NC_009901.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: vpa:VPA0465 putative NAD(P)H oxidoreductase; NAD(P)H dehydrogenase (quinone) 1492005 5661625 Spea_1226 Shewanella pealeana ATCC 700345 NAD(P)H dehydrogenase (quinone) YP_001501088.1 1491385 R 398579 CDS YP_001501089.1 157961055 5661626 1492366..1493577 1 NC_009901.1 PFAM: NnrS family protein; KEGG: shw:Sputw3181_3742 NnrS family protein; NnrS family protein 1493577 5661626 Spea_1227 Shewanella pealeana ATCC 700345 NnrS family protein YP_001501089.1 1492366 D 398579 CDS YP_001501090.1 157961056 5661627 1493670..1495079 1 NC_009901.1 PFAM: cytochrome c552; KEGG: slo:Shew_0505 nitrite reductase (cytochrome; ammonia-forming); nitrite reductase 1495079 5661627 Spea_1228 Shewanella pealeana ATCC 700345 nitrite reductase YP_001501090.1 1493670 D 398579 CDS YP_001501091.1 157961057 5661628 1495344..1495832 1 NC_009901.1 hypothetical protein 1495832 5661628 Spea_1229 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501091.1 1495344 D 398579 CDS YP_001501092.1 157961058 5661629 1495878..1496930 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_0202 transcriptional regulator, AraC family; AraC family transcriptional regulator 1496930 5661629 Spea_1230 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001501092.1 1495878 D 398579 CDS YP_001501093.1 157961059 5661630 1497064..1499076 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: pfo:Pfl_2280 beta-lactamase-like; beta-lactamase domain-containing protein 1499076 5661630 Spea_1231 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001501093.1 1497064 D 398579 CDS YP_001501094.1 157961060 5661631 complement(1499742..1500542) 1 NC_009901.1 hypothetical protein 1500542 5661631 Spea_1232 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501094.1 1499742 R 398579 CDS YP_001501095.1 157961061 5661632 complement(1500535..1501386) 1 NC_009901.1 KEGG: mul:MUL_0516 hypothetical protein; hypothetical protein 1501386 5661632 Spea_1233 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501095.1 1500535 R 398579 CDS YP_001501096.1 157961062 5661633 complement(1502313..1504550) 1 NC_009901.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1504550 fadE 5661633 fadE Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase YP_001501096.1 1502313 R 398579 CDS YP_001501097.1 157961063 5661634 complement(1504994..1506181) 1 NC_009901.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 1506181 5661634 Spea_1235 Shewanella pealeana ATCC 700345 ribosome-associated GTPase YP_001501097.1 1504994 R 398579 CDS YP_001501098.1 157961064 5661635 complement(1506793..1507320) 1 NC_009901.1 KEGG: cps:CPS_3362 putative lipoprotein; putative lipoprotein 1507320 5661635 Spea_1236 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001501098.1 1506793 R 398579 CDS YP_001501099.1 157961065 5661636 complement(1507332..1509491) 1 NC_009901.1 KEGG: vfi:VFA0120 hypothetical cytosolic protein; hypothetical protein 1509491 5661636 Spea_1237 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501099.1 1507332 R 398579 CDS YP_001501100.1 157961066 5661637 1509927..1511111 1 NC_009901.1 PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2323 glycosyl transferase, group 1; group 1 glycosyl transferase 1511111 5661637 Spea_1238 Shewanella pealeana ATCC 700345 group 1 glycosyl transferase YP_001501100.1 1509927 D 398579 CDS YP_001501101.1 157961067 5661638 1511101..1513311 1 NC_009901.1 PFAM: extracellular solute-binding protein family 3; sodium:dicarboxylate symporter; KEGG: slo:Shew_3001 extracellular solute-binding protein, family 3; extracellular solute-binding protein 1513311 5661638 Spea_1239 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001501101.1 1511101 D 398579 CDS YP_001501102.1 157961068 5661639 1513360..1514181 1 NC_009901.1 KEGG: rde:RD1_0117 hypothetical protein; hypothetical protein 1514181 5661639 Spea_1240 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501102.1 1513360 D 398579 CDS YP_001501103.1 157961069 5661640 complement(1514218..1515216) 1 NC_009901.1 KEGG: cps:CPS_1463 hypothetical protein; hypothetical protein 1515216 5661640 Spea_1241 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501103.1 1514218 R 398579 CDS YP_001501104.1 157961070 5661641 1515607..1516335 1 NC_009901.1 hypothetical protein 1516335 5661641 Spea_1242 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501104.1 1515607 D 398579 CDS YP_001501105.1 157961071 5661642 1516340..1517866 1 NC_009901.1 PFAM: EAL domain protein; KEGG: ppr:PBPRB0827 hypothetical protein; diguanylate phosphodiesterase 1517866 5661642 Spea_1243 Shewanella pealeana ATCC 700345 diguanylate phosphodiesterase YP_001501105.1 1516340 D 398579 CDS YP_001501106.1 157961072 5661643 complement(1518035..1518595) 1 NC_009901.1 PFAM: CBS domain containing protein; KEGG: cps:CPS_1349 CBS domain protein; hypothetical protein 1518595 5661643 Spea_1244 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501106.1 1518035 R 398579 CDS YP_001501107.1 157961073 5661644 1518901..1519629 1 NC_009901.1 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A 1519629 5661644 Spea_1245 Shewanella pealeana ATCC 700345 nitroreductase A YP_001501107.1 1518901 D 398579 CDS YP_001501108.1 157961074 5661645 1519846..1520373 1 NC_009901.1 PFAM: PEBP family protein; KEGG: vfi:VFA0932 putative phospholipid-binding protein; PEBP family protein 1520373 5661645 Spea_1246 Shewanella pealeana ATCC 700345 PEBP family protein YP_001501108.1 1519846 D 398579 CDS YP_001501109.1 157961075 5661646 1520438..1521247 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: vfi:VFA0931 transcriptional regulatory, AraC-like; AraC family transcriptional regulator 1521247 5661646 Spea_1247 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001501109.1 1520438 D 398579 CDS YP_001501110.1 157961076 5661647 1522011..1522352 1 NC_009901.1 TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; KEGG: slo:Shew_1931 alkylphosphonate utilization operon protein PhnA; alkylphosphonate utilization operon protein PhnA 1522352 5661647 Spea_1248 Shewanella pealeana ATCC 700345 alkylphosphonate utilization operon protein PhnA YP_001501110.1 1522011 D 398579 CDS YP_001501111.1 157961077 5661648 complement(1522829..1523641) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: shm:Shewmr7_0453 transcriptional regulator, AraC family; AraC family transcriptional regulator 1523641 5661648 Spea_1249 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001501111.1 1522829 R 398579 CDS YP_001501112.1 157961078 5661649 1523743..1524276 1 NC_009901.1 TIGRFAM: alkylhydroperoxidase-like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: she:Shewmr4_3500 alkylhydroperoxidase-like protein, AhpD family; alkylhydroperoxidase 1524276 5661649 Spea_1250 Shewanella pealeana ATCC 700345 alkylhydroperoxidase YP_001501112.1 1523743 D 398579 CDS YP_001501113.1 157961079 5661650 1524295..1524732 1 NC_009901.1 PFAM: protein of unknown function DUF417; KEGG: aha:AHA_4046 MC21 protein; hypothetical protein 1524732 5661650 Spea_1251 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501113.1 1524295 D 398579 CDS YP_001501114.1 157961080 5661651 complement(1524818..1525516) 1 NC_009901.1 KEGG: slo:Shew_1250 hypothetical protein; hypothetical protein 1525516 5661651 Spea_1252 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501114.1 1524818 R 398579 CDS YP_001501115.1 157961081 5661652 1525654..1527147 1 NC_009901.1 KEGG: slo:Shew_1251 hypothetical protein; hypothetical protein 1527147 5661652 Spea_1253 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501115.1 1525654 D 398579 CDS YP_001501116.1 157961082 5661653 1527312..1527938 1 NC_009901.1 KEGG: slo:Shew_1252 transposase; transposase 1527938 5661653 Spea_1254 Shewanella pealeana ATCC 700345 transposase YP_001501116.1 1527312 D 398579 CDS YP_001501117.1 157961083 5661654 complement(1527993..1528553) 1 NC_009901.1 PFAM: integrase family protein; KEGG: slo:Shew_1254 phage integrase family protein; integrase family protein 1528553 5661654 Spea_1255 Shewanella pealeana ATCC 700345 integrase family protein YP_001501117.1 1527993 R 398579 CDS YP_001501118.1 157961084 5661655 complement(1528687..1529100) 1 NC_009901.1 KEGG: shm:Shewmr7_1773 hypothetical protein; hypothetical protein 1529100 5661655 Spea_1256 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501118.1 1528687 R 398579 CDS YP_001501119.1 157961085 5661656 complement(1529279..1529620) 1 NC_009901.1 PFAM: YagBYeeUYfjZ family protein; KEGG: shn:Shewana3_1802 YagBYeeUYfjZ family protein; hypothetical protein 1529620 5661656 Spea_1257 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501119.1 1529279 R 398579 CDS YP_001501120.1 157961086 5661657 complement(1529734..1530096) 1 NC_009901.1 KEGG: shm:Shewmr7_1775 hypothetical protein; hypothetical protein 1530096 5661657 Spea_1258 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501120.1 1529734 R 398579 CDS YP_001501121.1 157961087 5661658 complement(1530156..1530632) 1 NC_009901.1 PFAM: DNA repair protein RadC; KEGG: shm:Shewmr7_1776 DNA repair protein RadC; DNA repair protein RadC 1530632 5661658 Spea_1259 Shewanella pealeana ATCC 700345 DNA repair protein RadC YP_001501121.1 1530156 R 398579 CDS YP_001501122.1 157961088 5661659 1530827..1531030 1 NC_009901.1 PFAM: Prophage CP4-57 regulatory; KEGG: shm:Shewmr7_1777 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 1531030 5661659 Spea_1260 Shewanella pealeana ATCC 700345 phage transcriptional regulator AlpA YP_001501122.1 1530827 D 398579 CDS YP_001501123.1 157961089 5661660 complement(1531543..1531761) 1 NC_009901.1 hypothetical protein 1531761 5661660 Spea_1261 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501123.1 1531543 R 398579 CDS YP_001501124.1 157961090 5661661 complement(1532360..1533223) 1 NC_009901.1 KEGG: vvy:VV2215 hypothetical protein; hypothetical protein 1533223 5661661 Spea_1262 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501124.1 1532360 R 398579 CDS YP_001501125.1 157961091 5661662 1533379..1534656 1 NC_009901.1 KEGG: ajs:Ajs_3602 hypothetical protein; hypothetical protein 1534656 5661662 Spea_1263 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501125.1 1533379 D 398579 CDS YP_001501126.1 157961092 5661663 1534646..1535215 1 NC_009901.1 KEGG: ajs:Ajs_3601 hypothetical protein; hypothetical protein 1535215 5661663 Spea_1264 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501126.1 1534646 D 398579 CDS YP_001501127.1 157961093 5661664 1535209..1538001 1 NC_009901.1 KEGG: pna:Pnap_4443 hypothetical protein; hypothetical protein 1538001 5661664 Spea_1265 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501127.1 1535209 D 398579 CDS YP_001501128.1 157961094 5661665 1537998..1538876 1 NC_009901.1 KEGG: pna:Pnap_4444 hypothetical protein; hypothetical protein 1538876 5661665 Spea_1266 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501128.1 1537998 D 398579 CDS YP_001501129.1 157961095 5661666 1539298..1540548 1 NC_009901.1 KEGG: vvy:VV2212 hypothetical protein; hypothetical protein 1540548 5661666 Spea_1267 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501129.1 1539298 D 398579 CDS YP_001501130.1 157961096 5661667 1540535..1542358 1 NC_009901.1 KEGG: vvy:VV2211 hypothetical protein; hypothetical protein 1542358 5661667 Spea_1268 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501130.1 1540535 D 398579 CDS YP_001501131.1 157961097 5661668 1542400..1545645 1 NC_009901.1 PFAM: helicase domain protein; KEGG: vvy:VV2210 hypothetical protein; helicase domain-containing protein 1545645 5661668 Spea_1269 Shewanella pealeana ATCC 700345 helicase domain-containing protein YP_001501131.1 1542400 D 398579 CDS YP_001501132.1 157961098 5661669 1546309..1547529 1 NC_009901.1 KEGG: sfu:Sfum_1322 DNA-cytosine methyltransferase; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 1547529 5661669 Spea_1270 Shewanella pealeana ATCC 700345 DNA-cytosine methyltransferase YP_001501132.1 1546309 D 398579 CDS YP_001501133.1 157961099 5661670 1547568..1551101 1 NC_009901.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: ava:Ava_1325 SNF2-related helicase; helicase domain-containing protein 1551101 5661670 Spea_1271 Shewanella pealeana ATCC 700345 helicase domain-containing protein YP_001501133.1 1547568 D 398579 CDS YP_001501134.1 157961100 5661671 1551112..1555173 1 NC_009901.1 KEGG: ava:Ava_C0223 hypothetical protein; hypothetical protein 1555173 5661671 Spea_1272 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501134.1 1551112 D 398579 CDS YP_001501135.1 157961101 5661672 1555239..1558805 1 NC_009901.1 PFAM: helicase domain protein; KEGG: sth:STH1306 putative DNA helicase; helicase domain-containing protein 1558805 5661672 Spea_1273 Shewanella pealeana ATCC 700345 helicase domain-containing protein YP_001501135.1 1555239 D 398579 CDS YP_001501136.1 157961102 5661673 1558802..1560625 1 NC_009901.1 KEGG: sth:STH1305 hypothetical protein; hypothetical protein 1560625 5661673 Spea_1274 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501136.1 1558802 D 398579 CDS YP_001501137.1 157961103 5661674 1560622..1561461 1 NC_009901.1 KEGG: sth:STH1304 hypothetical protein; hypothetical protein 1561461 5661674 Spea_1275 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501137.1 1560622 D 398579 CDS YP_001501138.1 157961104 5661675 1561552..1562637 1 NC_009901.1 KEGG: ecj:JW2611 hypothetical protein; hypothetical protein 1562637 5661675 Spea_1276 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501138.1 1561552 D 398579 CDS YP_001501139.1 157961105 5661676 1562630..1563025 1 NC_009901.1 KEGG: ecj:JW5418 hypothetical protein; hypothetical protein 1563025 5661676 Spea_1277 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501139.1 1562630 D 398579 CDS YP_001501140.1 157961106 5661677 complement(1563144..1563494) 1 NC_009901.1 KEGG: spc:Sputcn32_2917 hypothetical protein; hypothetical protein 1563494 5661677 Spea_1278 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501140.1 1563144 R 398579 CDS YP_001501141.1 157961107 5661678 complement(1563727..1564083) 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: slo:Shew_1266 transcriptional regulator, XRE family; XRE family transcriptional regulator 1564083 5661678 Spea_1279 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001501141.1 1563727 R 398579 CDS YP_001501142.1 157961108 5661679 1564202..1564696 1 NC_009901.1 KEGG: slo:Shew_1265 hypothetical protein; hypothetical protein 1564696 5661679 Spea_1280 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501142.1 1564202 D 398579 CDS YP_001501143.1 157961109 5661680 complement(1564741..1565973) 1 NC_009901.1 PFAM: integrase family protein; KEGG: vvy:VV0817 phage integrase; integrase family protein 1565973 5661680 Spea_1281 Shewanella pealeana ATCC 700345 integrase family protein YP_001501143.1 1564741 R 398579 CDS YP_001501144.1 157961110 5664704 complement(1566605..1567099) 1 NC_009901.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1567099 smpB 5664704 smpB Shewanella pealeana ATCC 700345 SsrA-binding protein YP_001501144.1 1566605 R 398579 CDS YP_001501145.1 157961111 5661682 1567293..1567724 1 NC_009901.1 PFAM: cyclase/dehydrase; KEGG: slo:Shew_1269 cyclase/dehydrase; cyclase/dehydrase 1567724 5661682 Spea_1283 Shewanella pealeana ATCC 700345 cyclase/dehydrase YP_001501145.1 1567293 D 398579 CDS YP_001501146.1 157961112 5661683 1567721..1568053 1 NC_009901.1 PFAM: protein of unknown function UPF0125; KEGG: sbm:Shew185_1300 protein of unknown function UPF0125; hypothetical protein 1568053 5661683 Spea_1284 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501146.1 1567721 D 398579 CDS YP_001501147.1 157961113 5661684 complement(1568161..1568655) 1 NC_009901.1 PFAM: SmpA/OmlA domain protein; KEGG: slo:Shew_1271 SmpA/OmlA domain protein; SmpA/OmlA domain-containing protein 1568655 5661684 Spea_1285 Shewanella pealeana ATCC 700345 SmpA/OmlA domain-containing protein YP_001501147.1 1568161 R 398579 CDS YP_001501148.1 157961114 5661685 1569121..1569924 1 NC_009901.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: slo:Shew_1272 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 1569924 5661685 Spea_1286 Shewanella pealeana ATCC 700345 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001501148.1 1569121 D 398579 CDS YP_001501149.1 157961115 5661686 1570060..1570224 1 NC_009901.1 KEGG: son:SO_1479 hypothetical protein; hypothetical protein 1570224 5661686 Spea_1287 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501149.1 1570060 D 398579 CDS YP_001501150.1 157961116 5661687 1570480..1570692 1 NC_009901.1 KEGG: saz:Sama_2383 hypothetical protein; hypothetical protein 1570692 5661687 Spea_1288 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501150.1 1570480 D 398579 CDS YP_001501151.1 157961117 5661688 1570703..1572490 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO_1480 GGDEF family protein; diguanylate cyclase 1572490 5661688 Spea_1289 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001501151.1 1570703 D 398579 CDS YP_001501152.1 157961118 5661689 1573642..1575306 1 NC_009901.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 1575306 5661689 Spea_1290 Shewanella pealeana ATCC 700345 malate synthase YP_001501152.1 1573642 D 398579 CDS YP_001501153.1 157961119 5661690 1575736..1577211 1 NC_009901.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: slo:Shew_1277 putative signal transduction protein; putative signal transduction protein 1577211 5661690 Spea_1291 Shewanella pealeana ATCC 700345 putative signal transduction protein YP_001501153.1 1575736 D 398579 CDS YP_001501154.1 157961120 5661691 complement(1577264..1577749) 1 NC_009901.1 KEGG: sbl:Sbal_3009 hypothetical protein; hypothetical protein 1577749 5661691 Spea_1292 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501154.1 1577264 R 398579 CDS YP_001501155.1 157961121 5661692 complement(1577807..1578631) 1 NC_009901.1 PFAM: protein of unknown function DUF980; KEGG: son:SO_3335 hypothetical protein; hypothetical protein 1578631 5661692 Spea_1293 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501155.1 1577807 R 398579 CDS YP_001501156.1 157961122 5661693 complement(1578876..1579319) 1 NC_009901.1 KEGG: slo:Shew_1280 transcriptional regulator, CopG family; CopG family transcriptional regulator 1579319 5661693 Spea_1294 Shewanella pealeana ATCC 700345 CopG family transcriptional regulator YP_001501156.1 1578876 R 398579 CDS YP_001501157.1 157961123 5661694 complement(1579279..1580022) 1 NC_009901.1 KEGG: slo:Shew_1281 hypothetical protein; hypothetical protein 1580022 5661694 Spea_1295 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501157.1 1579279 R 398579 CDS YP_001501158.1 157961124 5661695 1580588..1580812 1 NC_009901.1 KEGG: slo:Shew_1282 hypothetical protein; hypothetical protein 1580812 5661695 Spea_1296 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501158.1 1580588 D 398579 CDS YP_001501159.1 157961125 5661696 1581020..1581322 1 NC_009901.1 KEGG: slo:Shew_1283 NrfJ-related protein; NrfJ-like protein 1581322 5661696 Spea_1297 Shewanella pealeana ATCC 700345 NrfJ-like protein YP_001501159.1 1581020 D 398579 CDS YP_001501160.1 157961126 5661697 1581503..1582003 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_1284 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1582003 5661697 Spea_1298 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001501160.1 1581503 D 398579 CDS YP_001501161.1 157961127 5661698 1582088..1582630 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbm:Shew185_3014 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1582630 5661698 Spea_1299 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001501161.1 1582088 D 398579 CDS YP_001501162.1 157961128 5661699 complement(1582695..1584473) 1 NC_009901.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: slo:Shew_1285 5'-nucleotidase; 5'-nucleotidase 1584473 5661699 Spea_1300 Shewanella pealeana ATCC 700345 5'-nucleotidase YP_001501162.1 1582695 R 398579 CDS YP_001501163.1 157961129 5661700 complement(1584981..1586051) 1 NC_009901.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: sbm:Shew185_3009 protein of unknown function DUF21; hypothetical protein 1586051 5661700 Spea_1301 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501163.1 1584981 R 398579 CDS YP_001501164.1 157961130 5661701 1586212..1587333 1 NC_009901.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1587333 5661701 Spea_1302 Shewanella pealeana ATCC 700345 ribosomal RNA large subunit methyltransferase N YP_001501164.1 1586212 D 398579 CDS YP_001501165.1 157961131 5661702 1587365..1588165 1 NC_009901.1 KEGG: slo:Shew_1288 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1588165 5661702 Spea_1303 Shewanella pealeana ATCC 700345 type IV pilus biogenesis/stability protein PilW YP_001501165.1 1587365 D 398579 CDS YP_001501166.1 157961132 5661703 1588165..1589130 1 NC_009901.1 KEGG: saz:Sama_2366 hypothetical protein; hypothetical protein 1589130 5661703 Spea_1304 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501166.1 1588165 D 398579 CDS YP_001501167.1 157961133 5661704 1589152..1590267 1 NC_009901.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1590267 ispG 5661704 ispG Shewanella pealeana ATCC 700345 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001501167.1 1589152 D 398579 CDS YP_001501168.1 157961134 5661705 1590407..1591681 1 NC_009901.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1591681 hisS 5661705 hisS Shewanella pealeana ATCC 700345 histidyl-tRNA synthetase YP_001501168.1 1590407 D 398579 CDS YP_001501169.1 157961135 5661706 1591696..1592316 1 NC_009901.1 KEGG: slo:Shew_1292 tetratricopeptide TPR_4; hypothetical protein 1592316 5661706 Spea_1307 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501169.1 1591696 D 398579 CDS YP_001501170.1 157961136 5661707 1592328..1593515 1 NC_009901.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 1593515 5661707 Spea_1308 Shewanella pealeana ATCC 700345 outer membrane protein assembly complex subunit YfgL YP_001501170.1 1592328 D 398579 CDS YP_001501171.1 157961137 5661708 1593602..1595074 1 NC_009901.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1595074 engA 5661708 engA Shewanella pealeana ATCC 700345 GTP-binding protein EngA YP_001501171.1 1593602 D 398579 CDS YP_001501172.1 157961138 5661709 complement(1595153..1595872) 1 NC_009901.1 hypothetical protein 1595872 5661709 Spea_1310 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501172.1 1595153 R 398579 CDS YP_001501173.1 157961139 5661710 complement(1596103..1597005) 1 NC_009901.1 hypothetical protein 1597005 5661710 Spea_1311 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501173.1 1596103 R 398579 CDS YP_001501174.1 157961140 5661711 complement(1597820..1599157) 1 NC_009901.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1599157 xseA 5661711 xseA Shewanella pealeana ATCC 700345 exodeoxyribonuclease VII large subunit YP_001501174.1 1597820 R 398579 CDS YP_001501175.1 157961141 5661712 1599278..1600750 1 NC_009901.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1600750 5661712 Spea_1313 Shewanella pealeana ATCC 700345 inosine 5'-monophosphate dehydrogenase YP_001501175.1 1599278 D 398579 CDS YP_001501176.1 157961142 5661713 1600874..1602451 1 NC_009901.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1602451 guaA 5661713 guaA Shewanella pealeana ATCC 700345 GMP synthase YP_001501176.1 1600874 D 398579 CDS YP_001501177.1 157961143 5661714 1602580..1603071 1 NC_009901.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: shm:Shewmr7_1307 CMP/dCMP deaminase, zinc-binding protein; zinc-binding CMP/dCMP deaminase 1603071 5661714 Spea_1315 Shewanella pealeana ATCC 700345 zinc-binding CMP/dCMP deaminase YP_001501177.1 1602580 D 398579 CDS YP_001501178.1 157961144 5661715 complement(1603486..1604925) 1 NC_009901.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 1604925 5661715 Spea_1316 Shewanella pealeana ATCC 700345 putative transglycosylase YP_001501178.1 1603486 R 398579 CDS YP_001501179.1 157961145 5661716 1605218..1609099 1 NC_009901.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 1609099 5661716 Spea_1317 Shewanella pealeana ATCC 700345 phosphoribosylformylglycinamidine synthase YP_001501179.1 1605218 D 398579 CDS YP_001501180.1 157961146 5661717 1610325..1611881 1 NC_009901.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: slo:Shew_1302 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1611881 5661717 Spea_1318 Shewanella pealeana ATCC 700345 cytochrome bd ubiquinol oxidase subunit I YP_001501180.1 1610325 D 398579 CDS YP_001501181.1 157961147 5661718 1611897..1613036 1 NC_009901.1 KEGG: slo:Shew_1303 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 1613036 5661718 Spea_1319 Shewanella pealeana ATCC 700345 cytochrome d ubiquinol oxidase subunit II YP_001501181.1 1611897 D 398579 CDS YP_001501182.1 157961148 5661719 1613052..1613168 1 NC_009901.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: slo:Shew_1304 cyd operon protein YbgT; cyd operon protein YbgT 1613168 5661719 Spea_1320 Shewanella pealeana ATCC 700345 cyd operon protein YbgT YP_001501182.1 1613052 D 398579 CDS YP_001501183.1 157961149 5661720 complement(1613671..1614243) 1 NC_009901.1 hypothetical protein 1614243 5661720 Spea_1321 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501183.1 1613671 R 398579 CDS YP_001501184.1 157961150 5661721 complement(1614466..1616469) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_1310 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1616469 5661721 Spea_1322 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001501184.1 1614466 R 398579 CDS YP_001501185.1 157961151 5661722 1616760..1617014 1 NC_009901.1 PFAM: protein of unknown function DUF465; KEGG: saz:Sama_2344 hypothetical protein; hypothetical protein 1617014 5661722 Spea_1323 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501185.1 1616760 D 398579 CDS YP_001501186.1 157961152 5661723 complement(1616998..1620114) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: slo:Shew_1311 acriflavin resistance protein; acriflavin resistance protein 1620114 5661723 Spea_1324 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501186.1 1616998 R 398579 CDS YP_001501187.1 157961153 5661724 complement(1620120..1621232) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: slo:Shew_1312 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1621232 5661724 Spea_1325 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501187.1 1620120 R 398579 CDS YP_001501188.1 157961154 5661725 1621419..1622036 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_1313 transcriptional regulator, TetR family; TetR family transcriptional regulator 1622036 5661725 Spea_1326 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001501188.1 1621419 D 398579 CDS YP_001501189.1 157961155 5661726 complement(1622099..1622674) 1 NC_009901.1 KEGG: sbm:Shew185_2984 hypothetical protein; hypothetical protein 1622674 5661726 Spea_1327 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501189.1 1622099 R 398579 CDS YP_001501190.1 157961156 5661727 complement(1622706..1623185) 1 NC_009901.1 KEGG: slo:Shew_1316 hypothetical protein; hypothetical protein 1623185 5661727 Spea_1328 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501190.1 1622706 R 398579 CDS YP_001501191.1 157961157 5661728 1623485..1624237 1 NC_009901.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pin:Ping_2637 methyltransferase type 12; type 11 methyltransferase 1624237 5661728 Spea_1329 Shewanella pealeana ATCC 700345 type 11 methyltransferase YP_001501191.1 1623485 D 398579 CDS YP_001501192.1 157961158 5661729 1624590..1625843 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: vfi:VF0647 proton/sodium-glutamate symport protein; sodium:dicarboxylate symporter 1625843 5661729 Spea_1330 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001501192.1 1624590 D 398579 CDS YP_001501193.1 157961159 5661730 complement(1625951..1626781) 1 NC_009901.1 PFAM: fatty acid hydroxylase; KEGG: eli:ELI_07660 hypothetical protein; fatty acid hydroxylase 1626781 5661730 Spea_1331 Shewanella pealeana ATCC 700345 fatty acid hydroxylase YP_001501193.1 1625951 R 398579 CDS YP_001501194.1 157961160 5664705 complement(1627615..1628784) 1 NC_009901.1 KEGG: slo:Shew_1337 hypothetical protein; hypothetical protein 1628784 5664705 Spea_1332 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501194.1 1627615 R 398579 CDS YP_001501195.1 157961161 5661732 1629092..1629721 1 NC_009901.1 KEGG: shw:Sputw3181_1399 hypothetical protein; hypothetical protein 1629721 5661732 Spea_1333 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501195.1 1629092 D 398579 CDS YP_001501196.1 157961162 5661733 1629722..1630168 1 NC_009901.1 PFAM: protein of unknown function DUF400; KEGG: slo:Shew_1339 protein of unknown function DUF400; hypothetical protein 1630168 5661733 Spea_1334 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501196.1 1629722 D 398579 CDS YP_001501197.1 157961163 5661734 complement(1630556..1630981) 1 NC_009901.1 PFAM: FlgN family protein; KEGG: slo:Shew_1340 FlgN family protein; FlgN family protein 1630981 5661734 Spea_1335 Shewanella pealeana ATCC 700345 FlgN family protein YP_001501197.1 1630556 R 398579 CDS YP_001501198.1 157961164 5661735 complement(1631078..1631395) 1 NC_009901.1 PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: slo:Shew_1341 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM 1631395 5661735 Spea_1336 Shewanella pealeana ATCC 700345 anti-sigma-28 factor FlgM YP_001501198.1 1631078 R 398579 CDS YP_001501199.1 157961165 5661736 complement(1631493..1632266) 1 NC_009901.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1632266 flgA 5661736 flgA Shewanella pealeana ATCC 700345 flagellar basal body P-ring biosynthesis protein FlgA YP_001501199.1 1631493 R 398579 CDS YP_001501200.1 157961166 5661737 1632477..1633397 1 NC_009901.1 PFAM: response regulator receiver; CheW domain protein; KEGG: shw:Sputw3181_1404 putative CheW protein; response regulator receiver modulated CheW protein 1633397 5661737 Spea_1338 Shewanella pealeana ATCC 700345 response regulator receiver modulated CheW protein YP_001501200.1 1632477 D 398579 CDS YP_001501201.1 157961167 5661738 1633537..1634370 1 NC_009901.1 PFAM: MCP methyltransferase CheR-type; KEGG: shn:Shewana3_1320 MCP methyltransferase, CheR-type; CheR-type MCP methyltransferase 1634370 5661738 Spea_1339 Shewanella pealeana ATCC 700345 CheR-type MCP methyltransferase YP_001501201.1 1633537 D 398579 CDS YP_001501202.1 157961168 5661739 1634536..1634934 1 NC_009901.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 1634934 flgB 5661739 flgB Shewanella pealeana ATCC 700345 flagellar basal body rod protein FlgB YP_001501202.1 1634536 D 398579 CDS YP_001501203.1 157961169 5661740 1634937..1635353 1 NC_009901.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1635353 flgC 5661740 flgC Shewanella pealeana ATCC 700345 flagellar basal body rod protein FlgC YP_001501203.1 1634937 D 398579 CDS YP_001501204.1 157961170 5661741 1635379..1636191 1 NC_009901.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 1636191 flgD 5661741 flgD Shewanella pealeana ATCC 700345 flagellar basal body rod modification protein YP_001501204.1 1635379 D 398579 CDS YP_001501205.1 157961171 5661742 1636277..1637638 1 NC_009901.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1637638 flgE 5661742 flgE Shewanella pealeana ATCC 700345 flagellar hook protein FlgE YP_001501205.1 1636277 D 398579 CDS YP_001501206.1 157961172 5661743 1638295..1639038 1 NC_009901.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 1639038 flgF 5661743 flgF Shewanella pealeana ATCC 700345 flagellar basal body rod protein FlgF YP_001501206.1 1638295 D 398579 CDS YP_001501207.1 157961173 5661744 1639049..1639837 1 NC_009901.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1639837 flgG 5661744 flgG Shewanella pealeana ATCC 700345 flagellar basal body rod protein FlgG YP_001501207.1 1639049 D 398579 CDS YP_001501208.1 157961174 5661745 1639881..1640534 1 NC_009901.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 1640534 flgH 5661745 flgH Shewanella pealeana ATCC 700345 flagellar basal body L-ring protein YP_001501208.1 1639881 D 398579 CDS YP_001501209.1 157961175 5661746 1640574..1641668 1 NC_009901.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1641668 flgI 5661746 flgI Shewanella pealeana ATCC 700345 flagellar basal body P-ring protein YP_001501209.1 1640574 D 398579 CDS YP_001501210.1 157961176 5661747 1641697..1642788 1 NC_009901.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 1642788 flgJ 5661747 flgJ Shewanella pealeana ATCC 700345 flagellar rod assembly protein/muramidase FlgJ YP_001501210.1 1641697 D 398579 CDS YP_001501211.1 157961177 5661748 1642832..1644754 1 NC_009901.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: slo:Shew_1354 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 1644754 5661748 Spea_1349 Shewanella pealeana ATCC 700345 flagellar hook-associated protein FlgK YP_001501211.1 1642832 D 398579 CDS YP_001501212.1 157961178 5661749 1644839..1646041 1 NC_009901.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 1646041 flgL 5661749 flgL Shewanella pealeana ATCC 700345 flagellar hook-associated protein FlgL YP_001501212.1 1644839 D 398579 CDS YP_001501213.1 157961179 5661750 1646348..1647532 1 NC_009901.1 PFAM: flagellin domain protein; KEGG: she:Shewmr4_1273 flagellin domain protein; flagellin domain-containing protein 1647532 5661750 Spea_1351 Shewanella pealeana ATCC 700345 flagellin domain-containing protein YP_001501213.1 1646348 D 398579 CDS YP_001501214.1 157961180 5661751 1648279..1649460 1 NC_009901.1 PFAM: flagellin domain protein; KEGG: she:Shewmr4_1273 flagellin domain protein; flagellin domain-containing protein 1649460 5661751 Spea_1352 Shewanella pealeana ATCC 700345 flagellin domain-containing protein YP_001501214.1 1648279 D 398579 CDS YP_001501215.1 157961181 5661752 1649673..1650146 1 NC_009901.1 PFAM: flagellar protein FlaG protein; KEGG: shn:Shewana3_1334 flagellar protein FlaG protein; flagellar protein FlaG protein 1650146 5661752 Spea_1353 Shewanella pealeana ATCC 700345 flagellar protein FlaG protein YP_001501215.1 1649673 D 398579 CDS YP_001501216.1 157961182 5661753 1650241..1651602 1 NC_009901.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: sfr:Sfri_1175 flagellar hook-associated 2 domain protein; flagellar hook-associated 2 domain-containing protein 1651602 5661753 Spea_1354 Shewanella pealeana ATCC 700345 flagellar hook-associated 2 domain-containing protein YP_001501216.1 1650241 D 398579 CDS YP_001501217.1 157961183 5661754 1651749..1652126 1 NC_009901.1 KEGG: spc:Sputcn32_2582 hypothetical protein; hypothetical protein 1652126 5661754 Spea_1355 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501217.1 1651749 D 398579 CDS YP_001501218.1 157961184 5661755 1652133..1652534 1 NC_009901.1 flagellin specific chaperone; flagellar protein FliS 1652534 fliS 5661755 fliS Shewanella pealeana ATCC 700345 flagellar protein FliS YP_001501218.1 1652133 D 398579 CDS YP_001501219.1 157961185 5661756 1652848..1654281 1 NC_009901.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; flagellar regulatory FleQ domain protein; SMART: AAA ATPase; KEGG: slo:Shew_1362 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 1654281 5661756 Spea_1357 Shewanella pealeana ATCC 700345 sigma-54 dependent trancsriptional regulator YP_001501219.1 1652848 D 398579 CDS YP_001501220.1 157961186 5661757 1654839..1655954 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: sbm:Shew185_2939 PAS/PAC sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 1655954 5661757 Spea_1358 Shewanella pealeana ATCC 700345 PAS/PAC sensor signal transduction histidine kinase YP_001501220.1 1654839 D 398579 CDS YP_001501221.1 157961187 5661758 1655947..1657299 1 NC_009901.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: sfr:Sfri_1180 two component, sigma54 specific, transcriptional regulator, fis family protein; Fis family two component sigma54 specific transcriptional regulator 1657299 5661758 Spea_1359 Shewanella pealeana ATCC 700345 Fis family two component sigma54 specific transcriptional regulator YP_001501221.1 1655947 D 398579 CDS YP_001501222.1 157961188 5661759 1657813..1658145 1 NC_009901.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sfr:Sfri_1181 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 1658145 5661759 Spea_1360 Shewanella pealeana ATCC 700345 flagellar hook-basal body complex subunit FliE YP_001501222.1 1657813 D 398579 CDS YP_001501223.1 157961189 5661760 1658188..1659888 1 NC_009901.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1659888 fliF 5661760 fliF Shewanella pealeana ATCC 700345 flagellar MS-ring protein YP_001501223.1 1658188 D 398579 CDS YP_001501224.1 157961190 5661761 1659878..1660927 1 NC_009901.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1660927 fliG 5661761 fliG Shewanella pealeana ATCC 700345 flagellar motor switch protein G YP_001501224.1 1659878 D 398579 CDS YP_001501225.1 157961191 5661762 1660927..1661877 1 NC_009901.1 PFAM: flagellar assembly protein FliH; KEGG: sbm:Shew185_2934 flagellar assembly protein FliH; flagellar assembly protein FliH 1661877 5661762 Spea_1363 Shewanella pealeana ATCC 700345 flagellar assembly protein FliH YP_001501225.1 1660927 D 398579 CDS YP_001501226.1 157961192 5661763 1661849..1663189 1 NC_009901.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1663189 fliI 5661763 fliI Shewanella pealeana ATCC 700345 flagellum-specific ATP synthase YP_001501226.1 1661849 D 398579 CDS YP_001501227.1 157961193 5661764 1663244..1663690 1 NC_009901.1 TIGRFAM: flagellar export protein FliJ; KEGG: son:SO_3224 flagellar protein FliJ; flagellar export protein FliJ 1663690 5661764 Spea_1365 Shewanella pealeana ATCC 700345 flagellar export protein FliJ YP_001501227.1 1663244 D 398579 CDS YP_001501228.1 157961194 5661765 1663908..1665434 1 NC_009901.1 PFAM: flagellar hook-length control protein; KEGG: slo:Shew_1371 flagellar hook-length control protein; flagellar hook-length control protein 1665434 5661765 Spea_1366 Shewanella pealeana ATCC 700345 flagellar hook-length control protein YP_001501228.1 1663908 D 398579 CDS YP_001501229.1 157961195 5661766 1665511..1666029 1 NC_009901.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1666029 fliL 5661766 fliL Shewanella pealeana ATCC 700345 flagellar basal body-associated protein FliL YP_001501229.1 1665511 D 398579 CDS YP_001501230.1 157961196 5661767 1666098..1667126 1 NC_009901.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1667126 fliM 5661767 fliM Shewanella pealeana ATCC 700345 flagellar motor switch protein FliM YP_001501230.1 1666098 D 398579 CDS YP_001501231.1 157961197 5661768 1667139..1667519 1 NC_009901.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1667519 fliN 5661768 fliN Shewanella pealeana ATCC 700345 flagellar motor switch protein YP_001501231.1 1667139 D 398579 CDS YP_001501232.1 157961198 5661769 1667547..1667921 1 NC_009901.1 PFAM: flagellar biosynthesis protein FliO; KEGG: slo:Shew_1375 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein FliO 1667921 5661769 Spea_1370 Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FliO YP_001501232.1 1667547 D 398579 CDS YP_001501233.1 157961199 5661770 1667932..1668681 1 NC_009901.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1668681 fliP 5661770 fliP Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FliP YP_001501233.1 1667932 D 398579 CDS YP_001501234.1 157961200 5661771 1668689..1668958 1 NC_009901.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: slo:Shew_1377 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 1668958 5661771 Spea_1372 Shewanella pealeana ATCC 700345 flagellar biosynthetic protein FliQ YP_001501234.1 1668689 D 398579 CDS YP_001501235.1 157961201 5661772 1668997..1669797 1 NC_009901.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1669797 fliR 5661772 fliR Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FliR YP_001501235.1 1668997 D 398579 CDS YP_001501236.1 157961202 5661773 1669939..1671072 1 NC_009901.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1671072 flhB 5661773 flhB Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FlhB YP_001501236.1 1669939 D 398579 CDS YP_001501237.1 157961203 5661774 1671339..1673438 1 NC_009901.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1673438 flhA 5661774 flhA Shewanella pealeana ATCC 700345 flagellar biosynthesis protein FlhA YP_001501237.1 1671339 D 398579 CDS YP_001501238.1 157961204 5661775 1673450..1674862 1 NC_009901.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 1674862 flhF 5661775 flhF Shewanella pealeana ATCC 700345 flagellar biosynthesis regulator FlhF YP_001501238.1 1673450 D 398579 CDS YP_001501239.1 157961205 5661776 1674867..1675748 1 NC_009901.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: saz:Sama_2281 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 1675748 5661776 Spea_1377 Shewanella pealeana ATCC 700345 cobyrinic acid ac-diamide synthase YP_001501239.1 1674867 D 398579 CDS YP_001501240.1 157961206 5661777 1675741..1676460 1 NC_009901.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 1676460 fliA 5661777 fliA Shewanella pealeana ATCC 700345 flagellar biosynthesis sigma factor YP_001501240.1 1675741 D 398579 CDS YP_001501241.1 157961207 5661778 1676497..1676904 1 NC_009901.1 PFAM: response regulator receiver; KEGG: slo:Shew_1384 response regulator receiver protein; response regulator receiver protein 1676904 5661778 Spea_1379 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001501241.1 1676497 D 398579 CDS YP_001501242.1 157961208 5661779 1676918..1677655 1 NC_009901.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: saz:Sama_2278 putative chemotaxis phosphatase, CheZ; chemotaxis phosphatase CheZ 1677655 5661779 Spea_1380 Shewanella pealeana ATCC 700345 chemotaxis phosphatase CheZ YP_001501242.1 1676918 D 398579 CDS YP_001501243.1 157961209 5661780 1677668..1679893 1 NC_009901.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: slo:Shew_1386 CheA signal transduction histidine kinase; signal transduction histidine kinase CheA 1679893 5661780 Spea_1381 Shewanella pealeana ATCC 700345 signal transduction histidine kinase CheA YP_001501243.1 1677668 D 398579 CDS YP_001501244.1 157961210 5661781 1679983..1681164 1 NC_009901.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1681164 5661781 Spea_1382 Shewanella pealeana ATCC 700345 chemotaxis-specific methylesterase YP_001501244.1 1679983 D 398579 CDS YP_001501245.1 157961211 5661782 1681157..1681843 1 NC_009901.1 KEGG: slo:Shew_1388 hypothetical protein; hypothetical protein 1681843 5661782 Spea_1383 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501245.1 1681157 D 398579 CDS YP_001501246.1 157961212 5661783 1681984..1682775 1 NC_009901.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: slo:Shew_1389 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 1682775 5661783 Spea_1384 Shewanella pealeana ATCC 700345 cobyrinic acid ac-diamide synthase YP_001501246.1 1681984 D 398579 CDS YP_001501247.1 157961213 5661784 1682759..1683676 1 NC_009901.1 PFAM: CheW domain protein; KEGG: slo:Shew_1390 CheW protein; CheW protein 1683676 5661784 Spea_1385 Shewanella pealeana ATCC 700345 CheW protein YP_001501247.1 1682759 D 398579 CDS YP_001501248.1 157961214 5661785 1684185..1684676 1 NC_009901.1 PFAM: CheW domain protein; KEGG: slo:Shew_1391 CheW protein; CheW protein 1684676 5661785 Spea_1386 Shewanella pealeana ATCC 700345 CheW protein YP_001501248.1 1684185 D 398579 CDS YP_001501249.1 157961215 5661786 1685059..1685463 1 NC_009901.1 KEGG: slo:Shew_1392 hypothetical protein; hypothetical protein 1685463 5661786 Spea_1387 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501249.1 1685059 D 398579 CDS YP_001501250.1 157961216 5661787 complement(1685881..1686189) 1 NC_009901.1 KEGG: sbm:Shew185_2909 FlhB domain protein; FlhB domain-containing protein 1686189 5661787 Spea_1388 Shewanella pealeana ATCC 700345 FlhB domain-containing protein YP_001501250.1 1685881 R 398579 CDS YP_001501251.1 157961217 5661788 complement(1686216..1687718) 1 NC_009901.1 KEGG: son:SO_3198 hypothetical protein; hypothetical protein 1687718 5661788 Spea_1389 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501251.1 1686216 R 398579 CDS YP_001501252.1 157961218 5661789 1688215..1688982 1 NC_009901.1 PFAM: VacJ family lipoprotein; KEGG: sbl:Sbal_2897 VacJ family lipoprotein; VacJ family lipoprotein 1688982 5661789 Spea_1390 Shewanella pealeana ATCC 700345 VacJ family lipoprotein YP_001501252.1 1688215 D 398579 CDS YP_001501253.1 157961219 5661790 1689078..1690184 1 NC_009901.1 PFAM: response regulator receiver; KEGG: slo:Shew_1396 response regulator receiver protein; response regulator receiver protein 1690184 5661790 Spea_1391 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001501253.1 1689078 D 398579 CDS YP_001501254.1 157961220 5664706 complement(1690742..1692247) 1 NC_009901.1 KEGG: sbl:Sbal_2895 amino acid/peptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; major facilitator superfamily MFS_1; amino acid/peptide transporter 1692247 5664706 Spea_1393 Shewanella pealeana ATCC 700345 amino acid/peptide transporter YP_001501254.1 1690742 R 398579 CDS YP_001501255.1 157961221 5661792 1692692..1693213 1 NC_009901.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain protein; KEGG: slo:Shew_1398 NusG antitermination factor; transcriptional acivator RfaH 1693213 5661792 Spea_1394 Shewanella pealeana ATCC 700345 transcriptional acivator RfaH YP_001501255.1 1692692 D 398579 CDS YP_001501256.1 157961222 5661793 1694703..1697498 1 NC_009901.1 PFAM: polysaccharide export protein; KEGG: slo:Shew_1399 polysaccharide export protein; polysaccharide export protein 1697498 5661793 Spea_1395 Shewanella pealeana ATCC 700345 polysaccharide export protein YP_001501256.1 1694703 D 398579 CDS YP_001501257.1 157961223 5661794 1697589..1697948 1 NC_009901.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 1697948 5661794 Spea_1396 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501257.1 1697589 D 398579 CDS YP_001501258.1 157961224 5661795 1698048..1699025 1 NC_009901.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: slo:Shew_1400 lipopolysaccharide biosynthesis protein; lipopolysaccharide biosynthesis protein 1699025 5661795 Spea_1397 Shewanella pealeana ATCC 700345 lipopolysaccharide biosynthesis protein YP_001501258.1 1698048 D 398579 CDS YP_001501259.1 157961225 5661796 1699269..1700366 1 NC_009901.1 NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose; dTDP-glucose-4,6-dehydratase 1700366 5661796 Spea_1398 Shewanella pealeana ATCC 700345 dTDP-glucose-4,6-dehydratase YP_001501259.1 1699269 D 398579 CDS YP_001501260.1 157961226 5661797 1700366..1701238 1 NC_009901.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: son:SO_3186 glucose-1-phosphate-thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 1701238 5661797 Spea_1399 Shewanella pealeana ATCC 700345 glucose-1-phosphate thymidylyltransferase YP_001501260.1 1700366 D 398579 CDS YP_001501261.1 157961227 5661798 1701235..1701633 1 NC_009901.1 PFAM: WxcM domain protein; KEGG: plu:plu4812 WblP protein; WxcM domain-containing protein 1701633 5661798 Spea_1400 Shewanella pealeana ATCC 700345 WxcM domain-containing protein YP_001501261.1 1701235 D 398579 CDS YP_001501262.1 157961228 5661799 1701618..1702076 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: esa:ESA_01180 hypothetical protein; N-acetyltransferase GCN5 1702076 5661799 Spea_1401 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001501262.1 1701618 D 398579 CDS YP_001501263.1 157961229 5661800 1702078..1703004 1 NC_009901.1 KEGG: chu:CHU_2508 hypothetical protein; hypothetical protein 1703004 5661800 Spea_1402 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501263.1 1702078 D 398579 CDS YP_001501264.1 157961230 5661801 1703001..1704116 1 NC_009901.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: plu:plu4813 WblQ protein; DegT/DnrJ/EryC1/StrS aminotransferase 1704116 5661801 Spea_1403 Shewanella pealeana ATCC 700345 DegT/DnrJ/EryC1/StrS aminotransferase YP_001501264.1 1703001 D 398579 CDS YP_001501265.1 157961231 5661802 1704129..1707101 1 NC_009901.1 KEGG: nph:NP1948A hypothetical protein; hypothetical protein 1707101 5661802 Spea_1404 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501265.1 1704129 D 398579 CDS YP_001501266.1 157961232 5661803 1707098..1707727 1 NC_009901.1 PFAM: peptidase C26; KEGG: nph:NP1950A sugar metabolism cluster protein (predicted glutamine amidotransferases); peptidase C26 1707727 5661803 Spea_1405 Shewanella pealeana ATCC 700345 peptidase C26 YP_001501266.1 1707098 D 398579 CDS YP_001501267.1 157961233 5661804 1707724..1708515 1 NC_009901.1 KEGG: hha:Hhal_0773 nucleotidyl transferase; nucleotidyl transferase 1708515 5661804 Spea_1406 Shewanella pealeana ATCC 700345 nucleotidyl transferase YP_001501267.1 1707724 D 398579 CDS YP_001501268.1 157961234 5661805 1708496..1709797 1 NC_009901.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: fjo:Fjoh_2238 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 1709797 5661805 Spea_1407 Shewanella pealeana ATCC 700345 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_001501268.1 1708496 D 398579 CDS YP_001501269.1 157961235 5661806 1709809..1711257 1 NC_009901.1 PFAM: polysaccharide biosynthesis protein; KEGG: fjo:Fjoh_2240 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1711257 5661806 Spea_1408 Shewanella pealeana ATCC 700345 polysaccharide biosynthesis protein YP_001501269.1 1709809 D 398579 CDS YP_001501270.1 157961236 5661807 1711365..1712435 1 NC_009901.1 PFAM: glycosyl transferase group 1; KEGG: cth:Cthe_1357 glycosyl transferase, group 1; group 1 glycosyl transferase 1712435 5661807 Spea_1409 Shewanella pealeana ATCC 700345 group 1 glycosyl transferase YP_001501270.1 1711365 D 398579 CDS YP_001501271.1 157961237 5661808 1712484..1713719 1 NC_009901.1 KEGG: ftf:FTF1458c membrane protein/O-antigen protein; hypothetical protein 1713719 5661808 Spea_1410 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501271.1 1712484 D 398579 CDS YP_001501272.1 157961238 5661809 1713709..1714659 1 NC_009901.1 PFAM: glycosyl transferase family 2; KEGG: esa:ESA_01184 hypothetical protein; glycosyl transferase family protein 1714659 5661809 Spea_1411 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001501272.1 1713709 D 398579 CDS YP_001501273.1 157961239 5661810 1714661..1715428 1 NC_009901.1 PFAM: glycosyl transferase family 2; KEGG: cdf:CD2772 putative teichuronic acid biosynthesis glycosyl transferase; glycosyl transferase family protein 1715428 5661810 Spea_1412 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001501273.1 1714661 D 398579 CDS YP_001501274.1 157961240 5661811 1715486..1716649 1 NC_009901.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: wbgX; putative glycosyltransferase; DegT/DnrJ/EryC1/StrS aminotransferase 1716649 5661811 Spea_1413 Shewanella pealeana ATCC 700345 DegT/DnrJ/EryC1/StrS aminotransferase YP_001501274.1 1715486 D 398579 CDS YP_001501275.1 157961241 5661812 1716642..1717238 1 NC_009901.1 PFAM: sugar transferase; KEGG: wbgY; putative glycosyltransferase; sugar transferase 1717238 5661812 Spea_1414 Shewanella pealeana ATCC 700345 sugar transferase YP_001501275.1 1716642 D 398579 CDS YP_001501276.1 157961242 5664707 1718393..1720336 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sbl:Sbal_2876 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 1720336 5664707 Spea_1416 Shewanella pealeana ATCC 700345 polysaccharide biosynthesis protein CapD YP_001501276.1 1718393 D 398579 CDS YP_001501277.1 157961243 5661814 complement(1720905..1722413) 1 NC_009901.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: sfr:Sfri_2820 beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase 1722413 5661814 Spea_1417 Shewanella pealeana ATCC 700345 RNA-metabolising metallo-beta-lactamase YP_001501277.1 1720905 R 398579 CDS YP_001501278.1 157961244 5661815 1722866..1724032 1 NC_009901.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: she:Shewmr4_1330 UDP-glucose 6-dehydrogenase; UDP-glucose 6-dehydrogenase 1724032 5661815 Spea_1418 Shewanella pealeana ATCC 700345 UDP-glucose 6-dehydrogenase YP_001501278.1 1722866 D 398579 CDS YP_001501279.1 157961245 5661816 1724390..1725400 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: she:Shewmr4_3886 UDP-glucuronate 5'-epimerase; NAD-dependent epimerase/dehydratase 1725400 5661816 Spea_1419 Shewanella pealeana ATCC 700345 NAD-dependent epimerase/dehydratase YP_001501279.1 1724390 D 398579 CDS YP_001501280.1 157961246 5661817 1725678..1726247 1 NC_009901.1 KEGG: shw:Sputw3181_1476 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 1726247 5661817 Spea_1420 Shewanella pealeana ATCC 700345 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001501280.1 1725678 D 398579 CDS YP_001501281.1 157961247 5661818 complement(1726537..1727736) 1 NC_009901.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: sbl:Sbal_2320 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 1727736 5661818 Spea_1421 Shewanella pealeana ATCC 700345 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_001501281.1 1726537 R 398579 CDS YP_001501282.1 157961248 5661819 complement(1727790..1728245) 1 NC_009901.1 KEGG: shn:Shewana3_2003 glycerol-3-phosphate cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain; glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; glycerol-3-phosphate cytidylyltransferase 1728245 5661819 Spea_1422 Shewanella pealeana ATCC 700345 glycerol-3-phosphate cytidylyltransferase YP_001501282.1 1727790 R 398579 CDS YP_001501283.1 157961249 5661820 complement(1728315..1729742) 1 NC_009901.1 KEGG: shn:Shewana3_2004 nucleotidyl transferase; nucleotidyl transferase 1729742 5661820 Spea_1423 Shewanella pealeana ATCC 700345 nucleotidyl transferase YP_001501283.1 1728315 R 398579 CDS YP_001501284.1 157961250 5661821 complement(1729753..1731924) 1 NC_009901.1 KEGG: shn:Shewana3_2005 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: sugar transferase; glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 1731924 5661821 Spea_1424 Shewanella pealeana ATCC 700345 WecB/TagA/CpsF family glycosyl transferase YP_001501284.1 1729753 R 398579 CDS YP_001501285.1 157961251 5661822 complement(1732177..1733250) 1 NC_009901.1 PFAM: glycosyl transferase family 2; KEGG: shn:Shewana3_2006 glycosyl transferase, family 2; glycosyl transferase family protein 1733250 5661822 Spea_1425 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001501285.1 1732177 R 398579 CDS YP_001501286.1 157961252 5661823 complement(1733240..1734607) 1 NC_009901.1 PFAM: polysaccharide biosynthesis protein; KEGG: shn:Shewana3_2007 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1734607 5661823 Spea_1426 Shewanella pealeana ATCC 700345 polysaccharide biosynthesis protein YP_001501286.1 1733240 R 398579 CDS YP_001501287.1 157961253 5661824 complement(1735201..1736448) 1 NC_009901.1 KEGG: shn:Shewana3_2008 hypothetical protein; hypothetical protein 1736448 5661824 Spea_1427 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501287.1 1735201 R 398579 CDS YP_001501288.1 157961254 5661825 complement(1736406..1737812) 1 NC_009901.1 KEGG: shn:Shewana3_2009 hypothetical protein; hypothetical protein 1737812 5661825 Spea_1428 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501288.1 1736406 R 398579 CDS YP_001501289.1 157961255 5661826 complement(1737840..1739147) 1 NC_009901.1 PFAM: polysaccharide export protein; KEGG: shn:Shewana3_2010 polysaccharide export protein; polysaccharide export protein 1739147 5661826 Spea_1429 Shewanella pealeana ATCC 700345 polysaccharide export protein YP_001501289.1 1737840 R 398579 CDS YP_001501290.1 157961256 5661827 complement(1739159..1739524) 1 NC_009901.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: shn:Shewana3_2011 anti-sigma-factor antagonist; anti-sigma-factor antagonist 1739524 5661827 Spea_1430 Shewanella pealeana ATCC 700345 anti-sigma-factor antagonist YP_001501290.1 1739159 R 398579 CDS YP_001501291.1 157961257 5661828 complement(1740203..1740592) 1 NC_009901.1 KEGG: shn:Shewana3_2012 putative anti-sigma regulatory factor, serine/threonine protein kinase; putative anti-sigma regulatory factor 1740592 5661828 Spea_1431 Shewanella pealeana ATCC 700345 putative anti-sigma regulatory factor YP_001501291.1 1740203 R 398579 CDS YP_001501292.1 157961258 5661829 complement(1740608..1741831) 1 NC_009901.1 PFAM: response regulator receiver; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: shn:Shewana3_2013 response regulator receiver modulated serine phosphatase; response regulator receiver modulated serine phosphatase 1741831 5661829 Spea_1432 Shewanella pealeana ATCC 700345 response regulator receiver modulated serine phosphatase YP_001501292.1 1740608 R 398579 CDS YP_001501293.1 157961259 5661830 1742026..1742889 1 NC_009901.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: shn:Shewana3_2014 phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 1742889 5661830 Spea_1433 Shewanella pealeana ATCC 700345 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001501293.1 1742026 D 398579 CDS YP_001501294.1 157961260 5661831 1742889..1746449 1 NC_009901.1 KEGG: shn:Shewana3_2015 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 1746449 5661831 Spea_1434 Shewanella pealeana ATCC 700345 multi-sensor hybrid histidine kinase YP_001501294.1 1742889 D 398579 CDS YP_001501295.1 157961261 5661832 1746558..1748054 1 NC_009901.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: shn:Shewana3_2016 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma54 specific transcriptional regulator 1748054 5661832 Spea_1435 Shewanella pealeana ATCC 700345 Fis family two component sigma54 specific transcriptional regulator YP_001501295.1 1746558 D 398579 CDS YP_001501296.1 157961262 5661833 1748151..1748933 1 NC_009901.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sfr:Sfri_3709 PHP C-terminal domain protein; putative hydrolase 1748933 5661833 Spea_1436 Shewanella pealeana ATCC 700345 putative hydrolase YP_001501296.1 1748151 D 398579 CDS YP_001501297.1 157961263 5661834 1748985..1750076 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: shn:Shewana3_2793 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1750076 5661834 Spea_1437 Shewanella pealeana ATCC 700345 dTDP-4-dehydrorhamnose reductase YP_001501297.1 1748985 D 398579 CDS YP_001501298.1 157961264 5661835 complement(1750387..1751853) 1 NC_009901.1 KEGG: slo:Shew_1426 hypothetical protein; hypothetical protein 1751853 5661835 Spea_1438 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501298.1 1750387 R 398579 CDS YP_001501299.1 157961265 5661836 1752143..1754695 1 NC_009901.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sbl:Sbal_1133 beta-glucosidase; glycoside hydrolase family 3 1754695 5661836 Spea_1439 Shewanella pealeana ATCC 700345 glycoside hydrolase family 3 YP_001501299.1 1752143 D 398579 CDS YP_001501300.1 157961266 5661837 1754834..1755622 1 NC_009901.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: slo:Shew_1427 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 1755622 5661837 Spea_1440 Shewanella pealeana ATCC 700345 3'(2'),5'-bisphosphate nucleotidase YP_001501300.1 1754834 D 398579 CDS YP_001501301.1 157961267 5661838 1755727..1756632 1 NC_009901.1 catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 1756632 5661838 Spea_1441 Shewanella pealeana ATCC 700345 fructokinase YP_001501301.1 1755727 D 398579 CDS YP_001501302.1 157961268 5661839 1756797..1757567 1 NC_009901.1 PFAM: protein of unknown function DUF218; KEGG: slo:Shew_1429 protein of unknown function DUF218; hypothetical protein 1757567 5661839 Spea_1442 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501302.1 1756797 D 398579 CDS YP_001501303.1 157961269 5661840 1757890..1758564 1 NC_009901.1 KEGG: shm:Shewmr7_2681 hypothetical protein; hypothetical protein 1758564 5661840 Spea_1443 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501303.1 1757890 D 398579 CDS YP_001501304.1 157961270 5661841 complement(1758685..1759110) 1 NC_009901.1 PFAM: protein of unknown function DUF583; KEGG: slo:Shew_1431 protein of unknown function DUF583; hypothetical protein 1759110 5661841 Spea_1444 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501304.1 1758685 R 398579 CDS YP_001501305.1 157961271 5661842 complement(1759212..1759691) 1 NC_009901.1 TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shn:Shewana3_2784 ferredoxin-type protein NapF; ferredoxin-type protein NapF 1759691 5661842 Spea_1445 Shewanella pealeana ATCC 700345 ferredoxin-type protein NapF YP_001501305.1 1759212 R 398579 CDS YP_001501306.1 157961272 5661843 complement(1759867..1760886) 1 NC_009901.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: slo:Shew_1433 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1760886 5661843 Spea_1446 Shewanella pealeana ATCC 700345 UDP-glucose 4-epimerase YP_001501306.1 1759867 R 398579 CDS YP_001501307.1 157961273 5661844 complement(1760970..1761878) 1 NC_009901.1 KEGG: sbm:Shew185_1478 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase 1761878 5661844 Spea_1447 Shewanella pealeana ATCC 700345 UTP-glucose-1-phosphate uridylyltransferase YP_001501307.1 1760970 R 398579 CDS YP_001501308.1 157961274 5661845 1762393..1763184 1 NC_009901.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 1763184 phhA 5661845 phhA Shewanella pealeana ATCC 700345 phenylalanine 4-monooxygenase YP_001501308.1 1762393 D 398579 CDS YP_001501309.1 157961275 5661846 1763267..1763605 1 NC_009901.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 1763605 phhB 5661846 phhB Shewanella pealeana ATCC 700345 pterin-4-alpha-carbinolamine dehydratase YP_001501309.1 1763267 D 398579 CDS YP_001501310.1 157961276 5661847 1763886..1765427 1 NC_009901.1 PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; KEGG: slo:Shew_1437 transcriptional regulator, TyrR; transcriptional regulator TyrR 1765427 5661847 Spea_1450 Shewanella pealeana ATCC 700345 transcriptional regulator TyrR YP_001501310.1 1763886 D 398579 CDS YP_001501311.1 157961277 5661848 1765708..1766694 1 NC_009901.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: slo:Shew_1438 fumarylacetoacetate (FAA) hydrolase; fumarylacetoacetate (FAA) hydrolase 1766694 5661848 Spea_1451 Shewanella pealeana ATCC 700345 fumarylacetoacetate (FAA) hydrolase YP_001501311.1 1765708 D 398579 CDS YP_001501312.1 157961278 5661849 1766811..1767461 1 NC_009901.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: shn:Shewana3_2777 response regulator receiver protein; maleylacetoacetate isomerase 1767461 5661849 Spea_1452 Shewanella pealeana ATCC 700345 maleylacetoacetate isomerase YP_001501312.1 1766811 D 398579 CDS YP_001501313.1 157961279 5661850 complement(1767553..1768434) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shn:Shewana3_1691 transcriptional regulator, LysR family; LysR family transcriptional regulator 1768434 5661850 Spea_1453 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501313.1 1767553 R 398579 CDS YP_001501314.1 157961280 5661851 1768643..1769872 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_1441 major facilitator superfamily MFS_1; major facilitator transporter 1769872 5661851 Spea_1454 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001501314.1 1768643 D 398579 CDS YP_001501315.1 157961281 5661852 complement(1769998..1770276) 1 NC_009901.1 KEGG: slo:Shew_1448 hypothetical protein; hypothetical protein 1770276 5661852 Spea_1455 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501315.1 1769998 R 398579 CDS YP_001501316.1 157961282 5664718 1772396..1773805 1 NC_009901.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1773805 gltX 5664718 gltX Shewanella pealeana ATCC 700345 glutamyl-tRNA synthetase YP_001501316.1 1772396 D 398579 CDS YP_001501317.1 157961283 5664733 complement(1777529..1779358) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_1451 ABC transporter-related protein; ABC transporter-like protein 1779358 5664733 Spea_1457 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001501317.1 1777529 R 398579 CDS YP_001501318.1 157961284 5661855 1779534..1781048 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; Ada metal-binding domain protein; AlkA domain protein; KEGG: shn:Shewana3_1420 transcriptional regulator, AraC family; AraC family transcriptional regulator 1781048 5661855 Spea_1458 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001501318.1 1779534 D 398579 CDS YP_001501319.1 157961285 5661856 1781045..1781608 1 NC_009901.1 KEGG: sdn:Sden_2530 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 1781608 5661856 Spea_1459 Shewanella pealeana ATCC 700345 methylated-DNA--protein-cysteine methyltransferase YP_001501319.1 1781045 D 398579 CDS YP_001501320.1 157961286 5661857 1781753..1783081 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: shw:Sputw3181_1513 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1783081 5661857 Spea_1460 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001501320.1 1781753 D 398579 CDS YP_001501321.1 157961287 5661858 1783304..1783774 1 NC_009901.1 PFAM: Dual specificity protein phosphatase; KEGG: shw:Sputw3181_1514 dual specificity protein phosphatase; dual specificity protein phosphatase 1783774 5661858 Spea_1461 Shewanella pealeana ATCC 700345 dual specificity protein phosphatase YP_001501321.1 1783304 D 398579 CDS YP_001501322.1 157961288 5661859 1783801..1785345 1 NC_009901.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: slo:Shew_1456 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 1785345 5661859 Spea_1462 Shewanella pealeana ATCC 700345 phospholipase D/transphosphatidylase YP_001501322.1 1783801 D 398579 CDS YP_001501323.1 157961289 5661860 1785414..1786340 1 NC_009901.1 PFAM: response regulator receiver; CheW domain protein; KEGG: slo:Shew_1457 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 1786340 5661860 Spea_1463 Shewanella pealeana ATCC 700345 response regulator receiver modulated CheW protein YP_001501323.1 1785414 D 398579 CDS YP_001501324.1 157961290 5661861 1786520..1787743 1 NC_009901.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 1787743 5661861 Spea_1464 Shewanella pealeana ATCC 700345 serine/threonine transporter SstT YP_001501324.1 1786520 D 398579 CDS YP_001501325.1 157961291 5661862 complement(1787864..1789234) 1 NC_009901.1 PFAM: oxidoreductase domain protein; KEGG: sbm:Shew185_2813 oxidoreductase domain protein; oxidoreductase domain-containing protein 1789234 5661862 Spea_1465 Shewanella pealeana ATCC 700345 oxidoreductase domain-containing protein YP_001501325.1 1787864 R 398579 CDS YP_001501326.1 157961292 5661863 1789519..1789929 1 NC_009901.1 KEGG: slo:Shew_1459 hypothetical protein; hypothetical protein 1789929 5661863 Spea_1466 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501326.1 1789519 D 398579 CDS YP_001501327.1 157961293 5661864 complement(1790099..1790752) 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: shm:Shewmr7_1442 pseudouridylate synthase; pseudouridine synthase 1790752 5661864 Spea_1467 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001501327.1 1790099 R 398579 CDS YP_001501328.1 157961294 5661865 complement(1790889..1791482) 1 NC_009901.1 PFAM: protein of unknown function DUF479; KEGG: slo:Shew_2339 protein of unknown function DUF479; hypothetical protein 1791482 5661865 Spea_1468 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501328.1 1790889 R 398579 CDS YP_001501329.1 157961295 5661866 1791929..1792966 1 NC_009901.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1792966 queA 5661866 queA Shewanella pealeana ATCC 700345 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001501329.1 1791929 D 398579 CDS YP_001501330.1 157961296 5661867 1793152..1794285 1 NC_009901.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1794285 tgt 5661867 tgt Shewanella pealeana ATCC 700345 queuine tRNA-ribosyltransferase YP_001501330.1 1793152 D 398579 CDS YP_001501331.1 157961297 5661868 1794316..1794648 1 NC_009901.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1794648 yajC 5661868 yajC Shewanella pealeana ATCC 700345 preprotein translocase subunit YajC YP_001501331.1 1794316 D 398579 CDS YP_001501332.1 157961298 5661869 1794684..1796516 1 NC_009901.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1796516 secD 5661869 secD Shewanella pealeana ATCC 700345 preprotein translocase subunit SecD YP_001501332.1 1794684 D 398579 CDS YP_001501333.1 157961299 5661870 1796529..1797476 1 NC_009901.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1797476 secF 5661870 secF Shewanella pealeana ATCC 700345 preprotein translocase subunit SecF YP_001501333.1 1796529 D 398579 CDS YP_001501334.1 157961300 5661871 1797742..1798059 1 NC_009901.1 KEGG: slo:Shew_2333 hypothetical protein; hypothetical protein 1798059 5661871 Spea_1474 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501334.1 1797742 D 398579 CDS YP_001501335.1 157961301 5661872 1798059..1798418 1 NC_009901.1 PFAM: Rhodanese domain protein; KEGG: saz:Sama_2188 rhodanese-like protein; rhodanese domain-containing protein 1798418 5661872 Spea_1475 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001501335.1 1798059 D 398579 CDS YP_001501336.1 157961302 5661873 1798502..1799413 1 NC_009901.1 TIGRFAM: siroheme synthase; KEGG: sbl:Sbal_2781 siroheme synthase; siroheme synthase 1799413 5661873 Spea_1476 Shewanella pealeana ATCC 700345 siroheme synthase YP_001501336.1 1798502 D 398579 CDS YP_001501337.1 157961303 5661874 1799940..1800485 1 NC_009901.1 PFAM: YaeQ family protein; KEGG: shw:Sputw3181_1530 YaeQ family protein; YaeQ family protein 1800485 5661874 Spea_1477 Shewanella pealeana ATCC 700345 YaeQ family protein YP_001501337.1 1799940 D 398579 CDS YP_001501338.1 157961304 5661875 complement(1800580..1802019) 1 NC_009901.1 PFAM: carbon starvation protein CstA; KEGG: slo:Shew_2330 carbon starvation protein CstA; carbon starvation protein CstA 1802019 5661875 Spea_1478 Shewanella pealeana ATCC 700345 carbon starvation protein CstA YP_001501338.1 1800580 R 398579 CDS YP_001501339.1 157961305 5661876 complement(1802187..1802897) 1 NC_009901.1 unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT 1802897 5661876 Spea_1479 Shewanella pealeana ATCC 700345 putative two-component response-regulatory protein YehT YP_001501339.1 1802187 R 398579 CDS YP_001501340.1 157961306 5661877 complement(1802901..1804574) 1 NC_009901.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; KEGG: shn:Shewana3_2593 signal transduction histidine kinase, LytS; signal transduction histidine kinase LytS 1804574 5661877 Spea_1480 Shewanella pealeana ATCC 700345 signal transduction histidine kinase LytS YP_001501340.1 1802901 R 398579 CDS YP_001501341.1 157961307 5661878 1804760..1805002 1 NC_009901.1 KEGG: sfr:Sfri_1783 hypothetical protein; hypothetical protein 1805002 5661878 Spea_1481 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501341.1 1804760 D 398579 CDS YP_001501342.1 157961308 5661879 complement(1805074..1805370) 1 NC_009901.1 PFAM: type IV pilus assembly PilZ; KEGG: shn:Shewana3_2589 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1805370 5661879 Spea_1482 Shewanella pealeana ATCC 700345 type IV pilus assembly PilZ YP_001501342.1 1805074 R 398579 CDS YP_001501343.1 157961309 5661880 complement(1805587..1805994) 1 NC_009901.1 PFAM: phosphate-starvation-inducible E; KEGG: shn:Shewana3_2588 phosphate-starvation-inducible E; phosphate-starvation-inducible E 1805994 5661880 Spea_1483 Shewanella pealeana ATCC 700345 phosphate-starvation-inducible E YP_001501343.1 1805587 R 398579 CDS YP_001501344.1 157961310 5661881 complement(1806578..1807378) 1 NC_009901.1 PFAM: inositol monophosphatase; KEGG: slo:Shew_2321 inositol monophosphatase; inositol-phosphate phosphatase 1807378 5661881 Spea_1484 Shewanella pealeana ATCC 700345 inositol-phosphate phosphatase YP_001501344.1 1806578 R 398579 CDS YP_001501345.1 157961311 5661882 1807534..1808298 1 NC_009901.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: slo:Shew_2320 RNA methyltransferase, TrmH family, group 1; RNA methyltransferase 1808298 5661882 Spea_1485 Shewanella pealeana ATCC 700345 RNA methyltransferase YP_001501345.1 1807534 D 398579 CDS YP_001501346.1 157961312 5661883 1808326..1809147 1 NC_009901.1 TIGRFAM: serine O-acetyltransferase; KEGG: she:Shewmr4_1737 serine O-acetyltransferase; serine O-acetyltransferase 1809147 5661883 Spea_1486 Shewanella pealeana ATCC 700345 serine O-acetyltransferase YP_001501346.1 1808326 D 398579 CDS YP_001501347.1 157961313 5661884 1809342..1809803 1 NC_009901.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: slo:Shew_2318 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 1809803 5661884 Spea_1487 Shewanella pealeana ATCC 700345 BadM/Rrf2 family transcriptional regulator YP_001501347.1 1809342 D 398579 CDS YP_001501348.1 157961314 5661885 1809887..1811101 1 NC_009901.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 1811101 5661885 Spea_1488 Shewanella pealeana ATCC 700345 cysteine desulfurase YP_001501348.1 1809887 D 398579 CDS YP_001501349.1 157961315 5661886 1811142..1811525 1 NC_009901.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: slo:Shew_2316 FeS cluster assembly scaffold IscU; scaffold protein 1811525 5661886 Spea_1489 Shewanella pealeana ATCC 700345 scaffold protein YP_001501349.1 1811142 D 398579 CDS YP_001501350.1 157961316 5661887 1811540..1811863 1 NC_009901.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: slo:Shew_2315 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 1811863 5661887 Spea_1490 Shewanella pealeana ATCC 700345 iron-sulfur cluster assembly protein IscA YP_001501350.1 1811540 D 398579 CDS YP_001501351.1 157961317 5661888 1811882..1812406 1 NC_009901.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 1812406 hscB 5661888 hscB Shewanella pealeana ATCC 700345 co-chaperone HscB YP_001501351.1 1811882 D 398579 CDS YP_001501352.1 157961318 5661889 1812476..1814338 1 NC_009901.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1814338 hscA 5661889 hscA Shewanella pealeana ATCC 700345 chaperone protein HscA YP_001501352.1 1812476 D 398579 CDS YP_001501353.1 157961319 5661890 1814347..1814682 1 NC_009901.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: slo:Shew_2312 ferredoxin, 2Fe-2S type, ISC system; ferredoxin, 2Fe-2S type, ISC system 1814682 5661890 Spea_1493 Shewanella pealeana ATCC 700345 ferredoxin, 2Fe-2S type, ISC system YP_001501353.1 1814347 D 398579 CDS YP_001501354.1 157961320 5661891 1814795..1815193 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 1815193 5661891 Spea_1494 Shewanella pealeana ATCC 700345 transposase YP_001501354.1 1814795 D 398579 CDS YP_001501355.1 157961321 5661892 1815277..1816029 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 1816029 5661892 Spea_1495 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001501355.1 1815277 D 398579 CDS YP_001501356.1 157961322 5661893 1816742..1816939 1 NC_009901.1 PFAM: protein of unknown function DUF528; KEGG: slo:Shew_2311 protein of unknown function DUF528; hypothetical protein 1816939 5661893 Spea_1496 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501356.1 1816742 D 398579 CDS YP_001501357.1 157961323 5661894 1817121..1817285 1 NC_009901.1 KEGG: saz:Sama_1300 hypothetical protein; hypothetical protein 1817285 5661894 Spea_1497 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501357.1 1817121 D 398579 CDS YP_001501358.1 157961324 5661895 1817514..1817945 1 NC_009901.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1817945 ndk 5661895 ndk Shewanella pealeana ATCC 700345 nucleoside diphosphate kinase YP_001501358.1 1817514 D 398579 CDS YP_001501359.1 157961325 5661896 1819107..1821791 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_2244 TonB-dependent receptor; TonB-dependent receptor 1821791 5661896 Spea_1499 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001501359.1 1819107 D 398579 CDS YP_001501360.1 157961326 5661897 complement(1821915..1822271) 1 NC_009901.1 KEGG: shm:Shewmr7_2334 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 1822271 5661897 Spea_1500 Shewanella pealeana ATCC 700345 TraR/DksA family transcriptional regulator YP_001501360.1 1821915 R 398579 CDS YP_001501361.1 157961327 5661898 complement(1822390..1823349) 1 NC_009901.1 PFAM: dihydrouridine synthase DuS; KEGG: son:SO_2006 NifR3/Smm1 family protein; dihydrouridine synthase 1823349 5661898 Spea_1501 Shewanella pealeana ATCC 700345 dihydrouridine synthase YP_001501361.1 1822390 R 398579 CDS YP_001501362.1 157961328 5661899 1823718..1824200 1 NC_009901.1 KEGG: pha:PSHAa1196 hypothetical protein; hypothetical protein 1824200 5661899 Spea_1502 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501362.1 1823718 D 398579 CDS YP_001501363.1 157961329 5661900 1824280..1825131 1 NC_009901.1 PFAM: protein of unknown function DUF692; Xylose isomerase domain protein TIM barrel; KEGG: slo:Shew_2240 protein of unknown function DUF692; hypothetical protein 1825131 5661900 Spea_1503 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501363.1 1824280 D 398579 CDS YP_001501364.1 157961330 5661901 1825131..1825877 1 NC_009901.1 KEGG: slo:Shew_2239 hypothetical protein; hypothetical protein 1825877 5661901 Spea_1504 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501364.1 1825131 D 398579 CDS YP_001501365.1 157961331 5661902 1825971..1826090 1 NC_009901.1 KEGG: sfr:Sfri_2410 hypothetical protein; hypothetical protein 1826090 5661902 Spea_1505 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501365.1 1825971 D 398579 CDS YP_001501366.1 157961332 5661903 1826164..1826532 1 NC_009901.1 PFAM: protein of unknown function DUF454; KEGG: slo:Shew_2237 protein of unknown function DUF454; hypothetical protein 1826532 5661903 Spea_1506 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501366.1 1826164 D 398579 CDS YP_001501367.1 157961333 5661904 1826790..1827341 1 NC_009901.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1827341 5661904 Spea_1507 Shewanella pealeana ATCC 700345 adenine phosphoribosyltransferase YP_001501367.1 1826790 D 398579 CDS YP_001501368.1 157961334 5661905 1827540..1830386 1 NC_009901.1 KEGG: shn:Shewana3_2446 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 1830386 5661905 Spea_1508 Shewanella pealeana ATCC 700345 DNA polymerase III subunits gamma and tau YP_001501368.1 1827540 D 398579 CDS YP_001501369.1 157961335 5661906 1830487..1830816 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_2234 conserved hypothetical protein 103; hypothetical protein 1830816 5661906 Spea_1509 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501369.1 1830487 D 398579 CDS YP_001501370.1 157961336 5661907 complement(1831042..1831602) 1 NC_009901.1 KEGG: pla:Plav_3095 transferase hexapeptide repeat containing protein; acetyltransferase 1831602 5661907 Spea_1510 Shewanella pealeana ATCC 700345 acetyltransferase YP_001501370.1 1831042 R 398579 CDS YP_001501371.1 157961337 5661908 1832071..1832754 1 NC_009901.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: lpp:lpp2174 hypothetical protein; Sel1 domain-containing protein 1832754 5661908 Spea_1511 Shewanella pealeana ATCC 700345 Sel1 domain-containing protein YP_001501371.1 1832071 D 398579 CDS YP_001501372.1 157961338 5661909 1832757..1833677 1 NC_009901.1 hypothetical protein 1833677 5661909 Spea_1512 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501372.1 1832757 D 398579 CDS YP_001501373.1 157961339 5661910 1834262..1837156 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pha:PSHAb0158 putative TonB-dependent receptor with TonB-box; TonB-dependent receptor 1837156 5661910 Spea_1513 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001501373.1 1834262 D 398579 CDS YP_001501374.1 157961340 5661911 1837304..1838458 1 NC_009901.1 PFAM: Kelch repeat-containing protein; KEGG: cpe:CPE0726 hypothetical protein; kelch repeat-containing protein 1838458 5661911 Spea_1514 Shewanella pealeana ATCC 700345 kelch repeat-containing protein YP_001501374.1 1837304 D 398579 CDS YP_001501375.1 157961341 5661912 1838982..1841831 1 NC_009901.1 KEGG: vco:VC0395_A1381 neuraminidase; exo-alpha-sialidase 1841831 5661912 Spea_1515 Shewanella pealeana ATCC 700345 exo-alpha-sialidase YP_001501375.1 1838982 D 398579 CDS YP_001501376.1 157961342 5661913 complement(1841922..1842734) 1 NC_009901.1 KEGG: pha:PSHAb0155 putative hydrolase; putative hydrolase 1842734 5661913 Spea_1516 Shewanella pealeana ATCC 700345 putative hydrolase YP_001501376.1 1841922 R 398579 CDS YP_001501377.1 157961343 5661914 1842935..1843639 1 NC_009901.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; transcriptional regulator NanR 1843639 5661914 Spea_1517 Shewanella pealeana ATCC 700345 transcriptional regulator NanR YP_001501377.1 1842935 D 398579 CDS YP_001501378.1 157961344 5661915 1843894..1846572 1 NC_009901.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: pha:PSHAb0151 putative sodium-dependent carbohydrate permease; SSS family solute/sodium (Na+) symporter 1846572 5661915 Spea_1518 Shewanella pealeana ATCC 700345 SSS family solute/sodium (Na+) symporter YP_001501378.1 1843894 D 398579 CDS YP_001501379.1 157961345 5661916 1846596..1847351 1 NC_009901.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 1847351 5661916 Spea_1519 Shewanella pealeana ATCC 700345 N-acetylmannosamine-6-phosphate 2-epimerase YP_001501379.1 1846596 D 398579 CDS YP_001501380.1 157961346 5661917 1847348..1848220 1 NC_009901.1 PFAM: ROK family protein; KEGG: pha:PSHAb0149 putative N-acetylglucosamine kinase with actin-like ATPase domain/transcriptional regulator (NagC/XylR (ROK) family); ROK family protein 1848220 5661917 Spea_1520 Shewanella pealeana ATCC 700345 ROK family protein YP_001501380.1 1847348 D 398579 CDS YP_001501381.1 157961347 5661918 1848293..1849132 1 NC_009901.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: cps:CPS_1008 glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 1849132 5661918 Spea_1521 Shewanella pealeana ATCC 700345 glucosamine-6-phosphate isomerase YP_001501381.1 1848293 D 398579 CDS YP_001501382.1 157961348 5661919 complement(1849545..1850450) 1 NC_009901.1 PFAM: dihydrodipicolinate synthetase; KEGG: pha:PSHAb0156 N-acetylneuraminate lyase (aldolase); dihydrodipicolinate synthetase 1850450 5661919 Spea_1522 Shewanella pealeana ATCC 700345 dihydrodipicolinate synthetase YP_001501382.1 1849545 R 398579 CDS YP_001501383.1 157961349 5661920 complement(1850469..1851605) 1 NC_009901.1 KEGG: pha:PSHAb0157 putative N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 1851605 5661920 Spea_1523 Shewanella pealeana ATCC 700345 N-acetylglucosamine-6-phosphate deacetylase YP_001501383.1 1850469 R 398579 CDS YP_001501384.1 157961350 5661921 1852024..1853007 1 NC_009901.1 KEGG: pha:PSHAb0153 hypothetical protein; hypothetical protein 1853007 5661921 Spea_1524 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501384.1 1852024 D 398579 CDS YP_001501385.1 157961351 5661922 1853244..1853843 1 NC_009901.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1853843 recR 5661922 recR Shewanella pealeana ATCC 700345 recombination protein RecR YP_001501385.1 1853244 D 398579 CDS YP_001501386.1 157961352 5661923 1854069..1855985 1 NC_009901.1 molecular chaperone; heat shock protein 90 1855985 5661923 Spea_1526 Shewanella pealeana ATCC 700345 heat shock protein 90 YP_001501386.1 1854069 D 398579 CDS YP_001501387.1 157961353 5661924 1856074..1856919 1 NC_009901.1 PFAM: Thioredoxin domain; KEGG: slo:Shew_2231 thioredoxin domain protein; thioredoxin domain-containing protein 1856919 5661924 Spea_1527 Shewanella pealeana ATCC 700345 thioredoxin domain-containing protein YP_001501387.1 1856074 D 398579 CDS YP_001501388.1 157961354 5661925 1857059..1857742 1 NC_009901.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1857742 adk 5661925 adk Shewanella pealeana ATCC 700345 adenylate kinase YP_001501388.1 1857059 D 398579 CDS YP_001501389.1 157961355 5661926 1857913..1858908 1 NC_009901.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1858908 hemH 5661926 hemH Shewanella pealeana ATCC 700345 ferrochelatase YP_001501389.1 1857913 D 398579 CDS YP_001501390.1 157961356 5661927 1859148..1860476 1 NC_009901.1 PFAM: PfkB domain protein; KEGG: son:SO_2020 inosine-guanosine kinase; inosine kinase 1860476 5661927 Spea_1530 Shewanella pealeana ATCC 700345 inosine kinase YP_001501390.1 1859148 D 398579 CDS YP_001501391.1 157961357 5661928 1860585..1861139 1 NC_009901.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: vvu:VV2_1651 acetyltransferase; hexapaptide repeat-containing transferase 1861139 5661928 Spea_1531 Shewanella pealeana ATCC 700345 hexapaptide repeat-containing transferase YP_001501391.1 1860585 D 398579 CDS YP_001501392.1 157961358 5661929 complement(1861254..1862582) 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbl:Sbal_2499 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1862582 5661929 Spea_1532 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001501392.1 1861254 R 398579 CDS YP_001501393.1 157961359 5661930 1862800..1865223 1 NC_009901.1 PFAM: Ig domain protein group 1 domain protein; KEGG: slo:Shew_2226 Ig domain protein, group 1 domain protein; Ig domain-containing protein 1865223 5661930 Spea_1533 Shewanella pealeana ATCC 700345 Ig domain-containing protein YP_001501393.1 1862800 D 398579 CDS YP_001501394.1 157961360 5661931 complement(1865455..1866792) 1 NC_009901.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 1866792 5661931 Spea_1534 Shewanella pealeana ATCC 700345 succinylarginine dihydrolase YP_001501394.1 1865455 R 398579 CDS YP_001501395.1 157961361 5661932 1867129..1869819 1 NC_009901.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1869819 5661932 Spea_1535 Shewanella pealeana ATCC 700345 DNA topoisomerase I YP_001501395.1 1867129 D 398579 CDS YP_001501396.1 157961362 5661933 complement(1869980..1870756) 1 NC_009901.1 KEGG: slo:Shew_1623 hypothetical protein; hypothetical protein 1870756 5661933 Spea_1536 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501396.1 1869980 R 398579 CDS YP_001501397.1 157961363 5661934 1870985..1871959 1 NC_009901.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 1871959 cysB 5661934 cysB Shewanella pealeana ATCC 700345 transcriptional regulator CysB YP_001501397.1 1870985 D 398579 CDS YP_001501398.1 157961364 5661935 complement(1872055..1873431) 1 NC_009901.1 KEGG: she:Shewmr4_1725 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 1873431 5661935 Spea_1538 Shewanella pealeana ATCC 700345 L-serine dehydratase 1 YP_001501398.1 1872055 R 398579 CDS YP_001501399.1 157961365 5661936 1873763..1874830 1 NC_009901.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1874830 5661936 Spea_1539 Shewanella pealeana ATCC 700345 beta-hexosaminidase YP_001501399.1 1873763 D 398579 CDS YP_001501400.1 157961366 5661937 1874904..1875443 1 NC_009901.1 PFAM: protein of unknown function UPF0227; KEGG: slo:Shew_1627 protein of unknown function UPF0227; hypothetical protein 1875443 5661937 Spea_1540 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501400.1 1874904 D 398579 CDS YP_001501401.1 157961367 5661938 1875748..1876023 1 NC_009901.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1876023 5661938 Spea_1541 Shewanella pealeana ATCC 700345 acylphosphatase YP_001501401.1 1875748 D 398579 CDS YP_001501402.1 157961368 5661939 complement(1876020..1877027) 1 NC_009901.1 KEGG: slo:Shew_1629 hypothetical protein; hypothetical protein 1877027 5661939 Spea_1542 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501402.1 1876020 R 398579 CDS YP_001501403.1 157961369 5661940 complement(1877030..1880503) 1 NC_009901.1 KEGG: slo:Shew_1630 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; transcription-repair coupling factor 1880503 5661940 Spea_1543 Shewanella pealeana ATCC 700345 transcription-repair coupling factor YP_001501403.1 1877030 R 398579 CDS YP_001501404.1 157961370 5661941 complement(1880594..1881178) 1 NC_009901.1 KEGG: shw:Sputw3181_1854 hypothetical protein; hypothetical protein 1881178 5661941 Spea_1544 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501404.1 1880594 R 398579 CDS YP_001501405.1 157961371 5661942 1881397..1882620 1 NC_009901.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: slo:Shew_1632 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 1882620 5661942 Spea_1545 Shewanella pealeana ATCC 700345 LolC/E family lipoprotein releasing system, transmembrane protein YP_001501405.1 1881397 D 398579 CDS YP_001501406.1 157961372 5661943 1882713..1883429 1 NC_009901.1 KEGG: spc:Sputcn32_2155 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 1883429 5661943 Spea_1546 Shewanella pealeana ATCC 700345 lipoprotein releasing system, ATP-binding protein YP_001501406.1 1882713 D 398579 CDS YP_001501407.1 157961373 5661944 1883426..1884679 1 NC_009901.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: slo:Shew_1634 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 1884679 5661944 Spea_1547 Shewanella pealeana ATCC 700345 LolC/E family lipoprotein releasing system, transmembrane protein YP_001501407.1 1883426 D 398579 CDS YP_001501408.1 157961374 5661945 complement(1884734..1885114) 1 NC_009901.1 KEGG: sfr:Sfri_0576 hypothetical protein; hypothetical protein 1885114 5661945 Spea_1548 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501408.1 1884734 R 398579 CDS YP_001501409.1 157961375 5661946 1885454..1886368 1 NC_009901.1 KEGG: ppr:PBPRB1356 hypothetical protein; hypothetical protein 1886368 5661946 Spea_1549 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501409.1 1885454 D 398579 CDS YP_001501410.1 157961376 5661947 1886539..1886757 1 NC_009901.1 KEGG: pha:PSHAa1936 hypothetical protein; hypothetical protein 1886757 5661947 Spea_1550 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501410.1 1886539 D 398579 CDS YP_001501411.1 157961377 5661948 1887020..1887259 1 NC_009901.1 hypothetical protein 1887259 5661948 Spea_1551 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501411.1 1887020 D 398579 CDS YP_001501412.1 157961378 5661949 1887593..1888642 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: vha:VIBHAR_07032 hypothetical protein; secretion protein HlyD family protein 1888642 5661949 Spea_1552 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001501412.1 1887593 D 398579 CDS YP_001501413.1 157961379 5661950 1888721..1889779 1 NC_009901.1 KEGG: ppr:PBPRB1428 hypothetical protein; hypothetical protein 1889779 5661950 Spea_1553 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501413.1 1888721 D 398579 CDS YP_001501414.1 157961380 5661951 1889751..1890212 1 NC_009901.1 PFAM: regulatory protein MarR; KEGG: ppr:PBPRB1427 hypothetical transcriptional regulator; regulatory protein MarR 1890212 5661951 Spea_1554 Shewanella pealeana ATCC 700345 regulatory protein MarR YP_001501414.1 1889751 D 398579 CDS YP_001501415.1 157961381 5661952 complement(1890346..1890933) 1 NC_009901.1 PFAM: protein of unknown function DUF991; KEGG: slo:Shew_1489 protein of unknown function DUF991; hypothetical protein 1890933 5661952 Spea_1555 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501415.1 1890346 R 398579 CDS YP_001501416.1 157961382 5661953 complement(1890983..1891498) 1 NC_009901.1 KEGG: son:SO_2183 hypothetical protein; hypothetical protein 1891498 5661953 Spea_1556 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501416.1 1890983 R 398579 CDS YP_001501417.1 157961383 5661954 1891712..1892545 1 NC_009901.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: slo:Shew_1491 ion transport protein; Ion transport protein 1892545 5661954 Spea_1557 Shewanella pealeana ATCC 700345 Ion transport protein YP_001501417.1 1891712 D 398579 CDS YP_001501418.1 157961384 5661955 1892573..1894123 1 NC_009901.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: she:Shewmr4_1623 MATE efflux family protein; MATE efflux family protein 1894123 5661955 Spea_1558 Shewanella pealeana ATCC 700345 MATE efflux family protein YP_001501418.1 1892573 D 398579 CDS YP_001501419.1 157961385 5661956 complement(1894165..1894398) 1 NC_009901.1 KEGG: slo:Shew_1493 hypothetical protein; hypothetical protein 1894398 5661956 Spea_1559 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501419.1 1894165 R 398579 CDS YP_001501420.1 157961386 5661957 1894692..1895006 1 NC_009901.1 PFAM: protein of unknown function DUF437; KEGG: vvy:VVA0554 hypothetical protein; hypothetical protein 1895006 5661957 Spea_1560 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501420.1 1894692 D 398579 CDS YP_001501421.1 157961387 5661958 1895194..1895838 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: vha:VIBHAR_06539 hypothetical protein; TetR family transcriptional regulator 1895838 5661958 Spea_1561 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001501421.1 1895194 D 398579 CDS YP_001501422.1 157961388 5661959 1895838..1897193 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: vvu:VV2_1321 membrane-fusion protein; RND family efflux transporter MFP subunit 1897193 5661959 Spea_1562 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501422.1 1895838 D 398579 CDS YP_001501423.1 157961389 5661960 1897190..1900315 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: vha:VIBHAR_06541 hypothetical protein; acriflavin resistance protein 1900315 5661960 Spea_1563 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501423.1 1897190 D 398579 CDS YP_001501424.1 157961390 5661961 complement(1900820..1901632) 1 NC_009901.1 PFAM: purine or other phosphorylase family 1; KEGG: vpa:VPA1089 putative 5'-methylthioadenosine/S-adenosylhomocy steine nuclosidase; purine phosphorylase family 1 1901632 5661961 Spea_1564 Shewanella pealeana ATCC 700345 purine phosphorylase family 1 YP_001501424.1 1900820 R 398579 CDS YP_001501425.1 157961391 5661962 1901963..1902373 1 NC_009901.1 hypothetical protein 1902373 5661962 Spea_1565 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501425.1 1901963 D 398579 CDS YP_001501426.1 157961392 5661963 complement(1902474..1903436) 1 NC_009901.1 PFAM: Integral membrane protein TerC; KEGG: ppr:PBPRA2002 hypothetical transmembrane transportprotein; integral membrane protein TerC 1903436 5661963 Spea_1566 Shewanella pealeana ATCC 700345 integral membrane protein TerC YP_001501426.1 1902474 R 398579 CDS YP_001501427.1 157961393 5661964 complement(1903852..1904304) 1 NC_009901.1 KEGG: slo:Shew_1496 lipoprotein, putative; putative lipoprotein 1904304 5661964 Spea_1567 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001501427.1 1903852 R 398579 CDS YP_001501428.1 157961394 5661965 complement(1904527..1905003) 1 NC_009901.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: shw:Sputw3181_0824 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 1905003 5661965 Spea_1568 Shewanella pealeana ATCC 700345 glutathione-dependent formaldehyde-activating protein YP_001501428.1 1904527 R 398579 CDS YP_001501429.1 157961395 5661966 complement(1905297..1905740) 1 NC_009901.1 PFAM: UspA domain protein; KEGG: slo:Shew_3100 UspA domain protein; UspA domain-containing protein 1905740 5661966 Spea_1569 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001501429.1 1905297 R 398579 CDS YP_001501430.1 157961396 5661967 1906487..1907749 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: she:Shewmr4_0147 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1907749 5661967 Spea_1570 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001501430.1 1906487 D 398579 CDS YP_001501431.1 157961397 5661968 complement(1907819..1908595) 1 NC_009901.1 PFAM: band 7 protein; KEGG: slo:Shew_1785 band 7 protein; hypothetical protein 1908595 5661968 Spea_1571 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501431.1 1907819 R 398579 CDS YP_001501432.1 157961398 5661969 complement(1908606..1910102) 1 NC_009901.1 PFAM: protein of unknown function DUF107; KEGG: sdn:Sden_2190 protein of unknown function DUF107; hypothetical protein 1910102 5661969 Spea_1572 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501432.1 1908606 R 398579 CDS YP_001501433.1 157961399 5661970 1910725..1912086 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1912086 5661970 Spea_1573 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit A YP_001501433.1 1910725 D 398579 CDS YP_001501434.1 157961400 5661971 1912086..1913300 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1913300 5661971 Spea_1574 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit B YP_001501434.1 1912086 D 398579 CDS YP_001501435.1 157961401 5661972 1913448..1914227 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 1914227 5661972 Spea_1575 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit C YP_001501435.1 1913448 D 398579 CDS YP_001501436.1 157961402 5661973 1914231..1914854 1 NC_009901.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1914854 5661973 Spea_1576 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit D YP_001501436.1 1914231 D 398579 CDS YP_001501437.1 157961403 5661974 1914863..1915471 1 NC_009901.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 1915471 5661974 Spea_1577 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit E YP_001501437.1 1914863 D 398579 CDS YP_001501438.1 157961404 5661975 1915527..1916744 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1916744 5661975 Spea_1578 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit F YP_001501438.1 1915527 D 398579 CDS YP_001501439.1 157961405 5661976 1916786..1916887 1 NC_009901.1 KEGG: shw:Sputw3181_3319 NADH:ubiquinone oxidoreductase, subunit F; NADH:ubiquinone oxidoreductase subunit F 1916887 5661976 Spea_1579 Shewanella pealeana ATCC 700345 NADH:ubiquinone oxidoreductase subunit F YP_001501439.1 1916786 D 398579 CDS YP_001501440.1 157961406 5661977 1916927..1917028 1 NC_009901.1 KEGG: shw:Sputw3181_3319 NADH:ubiquinone oxidoreductase, subunit F; NADH:ubiquinone oxidoreductase subunit F 1917028 5661977 Spea_1580 Shewanella pealeana ATCC 700345 NADH:ubiquinone oxidoreductase subunit F YP_001501440.1 1916927 D 398579 CDS YP_001501441.1 157961407 5661978 1917069..1917170 1 NC_009901.1 KEGG: shw:Sputw3181_3319 NADH:ubiquinone oxidoreductase, subunit F; NADH:ubiquinone oxidoreductase subunit F 1917170 5661978 Spea_1581 Shewanella pealeana ATCC 700345 NADH:ubiquinone oxidoreductase subunit F YP_001501441.1 1917069 D 398579 CDS YP_001501442.1 157961408 5661979 1917383..1920538 1 NC_009901.1 KEGG: shn:Shewana3_2869 hypothetical protein; hypothetical protein 1920538 5661979 Spea_1582 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501442.1 1917383 D 398579 CDS YP_001501443.1 157961409 5661980 1920659..1920967 1 NC_009901.1 KEGG: saz:Sama_3567 hypothetical protein; hypothetical protein 1920967 5661980 Spea_1583 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501443.1 1920659 D 398579 CDS YP_001501444.1 157961410 5661981 1921380..1923185 1 NC_009901.1 PFAM: Arylsulfotransferase; KEGG: ecv:APECO1_3375 arylsulfate sulfotransferase; arylsulfotransferase 1923185 5661981 Spea_1584 Shewanella pealeana ATCC 700345 arylsulfotransferase YP_001501444.1 1921380 D 398579 CDS YP_001501445.1 157961411 5661982 complement(1923342..1924151) 1 NC_009901.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1924151 trpA 5661982 trpA Shewanella pealeana ATCC 700345 tryptophan synthase subunit alpha YP_001501445.1 1923342 R 398579 CDS YP_001501446.1 157961412 5661983 complement(1924162..1925391) 1 NC_009901.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1925391 5661983 Spea_1586 Shewanella pealeana ATCC 700345 tryptophan synthase subunit beta YP_001501446.1 1924162 R 398579 CDS YP_001501447.1 157961413 5661984 complement(1925488..1926915) 1 NC_009901.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1926915 5661984 Spea_1587 Shewanella pealeana ATCC 700345 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_001501447.1 1925488 R 398579 CDS YP_001501448.1 157961414 5661985 complement(1926917..1927993) 1 NC_009901.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1927993 trpD 5661985 trpD Shewanella pealeana ATCC 700345 anthranilate phosphoribosyltransferase YP_001501448.1 1926917 R 398579 CDS YP_001501449.1 157961415 5661986 complement(1927995..1928609) 1 NC_009901.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1928609 5661986 Spea_1589 Shewanella pealeana ATCC 700345 anthranilate synthase component II YP_001501449.1 1927995 R 398579 CDS YP_001501450.1 157961416 5661987 complement(1928606..1930189) 1 NC_009901.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1930189 5661987 Spea_1590 Shewanella pealeana ATCC 700345 anthranilate synthase component I YP_001501450.1 1928606 R 398579 CDS YP_001501451.1 157961417 5661988 1930887..1931621 1 NC_009901.1 PFAM: protein of unknown function DUF1538; KEGG: sfr:Sfri_2271 protein of unknown function DUF1538; hypothetical protein 1931621 5661988 Spea_1591 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501451.1 1930887 D 398579 CDS YP_001501452.1 157961418 5661989 1931621..1932406 1 NC_009901.1 PFAM: protein of unknown function DUF1538; KEGG: slo:Shew_1498 protein of unknown function DUF1538; hypothetical protein 1932406 5661989 Spea_1592 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501452.1 1931621 D 398579 CDS YP_001501453.1 157961419 5661990 1932396..1932746 1 NC_009901.1 KEGG: sfr:Sfri_2273 putative nitrogen regulatory protein P-II; putative nitrogen regulatory protein P-II 1932746 5661990 Spea_1593 Shewanella pealeana ATCC 700345 putative nitrogen regulatory protein P-II YP_001501453.1 1932396 D 398579 CDS YP_001501454.1 157961420 5661991 1932743..1933150 1 NC_009901.1 PFAM: CBS domain containing protein; KEGG: slo:Shew_1500 putative signal transduction protein with CBS domains; signal-transduction protein 1933150 5661991 Spea_1594 Shewanella pealeana ATCC 700345 signal-transduction protein YP_001501454.1 1932743 D 398579 CDS YP_001501455.1 157961421 5661992 1933349..1934158 1 NC_009901.1 PFAM: regulatory protein RecX; KEGG: sfr:Sfri_0228 regulatory protein RecX; regulatory protein RecX 1934158 5661992 Spea_1595 Shewanella pealeana ATCC 700345 regulatory protein RecX YP_001501455.1 1933349 D 398579 CDS YP_001501456.1 157961422 5661993 complement(1934192..1934776) 1 NC_009901.1 hypothetical protein 1934776 5661993 Spea_1596 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501456.1 1934192 R 398579 CDS YP_001501457.1 157961423 5661994 1935129..1935680 1 NC_009901.1 PFAM: PEBP family protein; KEGG: ajs:Ajs_0693 PEBP family protein; PEBP family protein 1935680 5661994 Spea_1597 Shewanella pealeana ATCC 700345 PEBP family protein YP_001501457.1 1935129 D 398579 CDS YP_001501458.1 157961424 5661995 complement(1935847..1936203) 1 NC_009901.1 KEGG: shw:Sputw3181_2537 glutaredoxin; glutaredoxin 1936203 5661995 Spea_1598 Shewanella pealeana ATCC 700345 glutaredoxin YP_001501458.1 1935847 R 398579 CDS YP_001501459.1 157961425 5661996 complement(1936292..1936948) 1 NC_009901.1 PFAM: peptidase S51 dipeptidase E; KEGG: slo:Shew_1665 peptidase S51, dipeptidase E; peptidase S51 dipeptidase E 1936948 5661996 Spea_1599 Shewanella pealeana ATCC 700345 peptidase S51 dipeptidase E YP_001501459.1 1936292 R 398579 CDS YP_001501460.1 157961426 5661997 complement(1937137..1940358) 1 NC_009901.1 PFAM: protein of unknown function DUF748; KEGG: slo:Shew_1502 protein of unknown function DUF748; hypothetical protein 1940358 5661997 Spea_1600 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501460.1 1937137 R 398579 CDS YP_001501461.1 157961427 5661998 1940724..1941431 1 NC_009901.1 KEGG: slo:Shew_1505 hypothetical protein; hypothetical protein 1941431 5661998 Spea_1601 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501461.1 1940724 D 398579 CDS YP_001501462.1 157961428 5661999 1941605..1941967 1 NC_009901.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sfr:Sfri_1598 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1941967 5661999 Spea_1602 Shewanella pealeana ATCC 700345 glyoxalase/bleomycin resistance protein/dioxygenase YP_001501462.1 1941605 D 398579 CDS YP_001501463.1 157961429 5662000 1942164..1942508 1 NC_009901.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: slo:Shew_1507 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase 1942508 5662000 Spea_1603 Shewanella pealeana ATCC 700345 5-carboxymethyl-2-hydroxymuconate isomerase YP_001501463.1 1942164 D 398579 CDS YP_001501464.1 157961430 5662001 1942884..1943606 1 NC_009901.1 KEGG: cps:CPS_3225 putative lipoprotein; hypothetical protein 1943606 5662001 Spea_1604 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501464.1 1942884 D 398579 CDS YP_001501465.1 157961431 5662002 complement(1943701..1945626) 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: sbm:Shew185_2764 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1945626 5662002 Spea_1605 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001501465.1 1943701 R 398579 CDS YP_001501466.1 157961432 5662003 1945794..1947068 1 NC_009901.1 PFAM: Beta-ketoacyl synthase; KEGG: slo:Shew_2410 beta-ketoacyl synthase; beta-ketoacyl synthase 1947068 5662003 Spea_1606 Shewanella pealeana ATCC 700345 beta-ketoacyl synthase YP_001501466.1 1945794 D 398579 CDS YP_001501467.1 157961433 5662004 1947207..1947566 1 NC_009901.1 KEGG: cps:CPS_3947 hypothetical protein; hypothetical protein 1947566 5662004 Spea_1607 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501467.1 1947207 D 398579 CDS YP_001501468.1 157961434 5662005 complement(1947713..1948666) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: atc:AGR_L_412GM hypothetical protein; LysR family transcriptional regulator 1948666 5662005 Spea_1608 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501468.1 1947713 R 398579 CDS YP_001501469.1 157961435 5662006 1948811..1949977 1 NC_009901.1 PFAM: alanine racemase domain protein; KEGG: eca:ECA2038 hypothetical protein; alanine racemase domain-containing protein 1949977 5662006 Spea_1609 Shewanella pealeana ATCC 700345 alanine racemase domain-containing protein YP_001501469.1 1948811 D 398579 CDS YP_001501470.1 157961436 5662007 1949979..1950920 1 NC_009901.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: eca:ECA2039 putative ornithine cyclodeaminase; ornithine cyclodeaminase 1950920 5662007 Spea_1610 Shewanella pealeana ATCC 700345 ornithine cyclodeaminase YP_001501470.1 1949979 D 398579 CDS YP_001501471.1 157961437 5662008 complement(1951141..1951572) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2806 acetyltransferase; N-acetyltransferase GCN5 1951572 5662008 Spea_1611 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001501471.1 1951141 R 398579 CDS YP_001501472.1 157961438 5662009 1951920..1953053 1 NC_009901.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: sbl:Sbal_2745 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit 1953053 5662009 Spea_1612 Shewanella pealeana ATCC 700345 D-isomer specific 2-hydroxyacid dehydrogenase catalytic subunit YP_001501472.1 1951920 D 398579 CDS YP_001501473.1 157961439 5662010 1953056..1954072 1 NC_009901.1 KEGG: slo:Shew_2308 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; aspartate-semialdehyde dehydrogenase 1954072 5662010 Spea_1613 Shewanella pealeana ATCC 700345 aspartate-semialdehyde dehydrogenase YP_001501473.1 1953056 D 398579 CDS YP_001501474.1 157961440 5662011 complement(1954127..1954879) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 1954879 5662011 Spea_1614 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001501474.1 1954127 R 398579 CDS YP_001501475.1 157961441 5662012 complement(1954963..1955361) 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 1955361 5662012 Spea_1615 Shewanella pealeana ATCC 700345 transposase YP_001501475.1 1954963 R 398579 CDS YP_001501476.1 157961442 5662013 1955564..1958437 1 NC_009901.1 KEGG: slo:Shew_2307 hypothetical protein; hypothetical protein 1958437 5662013 Spea_1616 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501476.1 1955564 D 398579 CDS YP_001501477.1 157961443 5662014 1958601..1959386 1 NC_009901.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1959386 truA 5662014 truA Shewanella pealeana ATCC 700345 tRNA pseudouridine synthase A YP_001501477.1 1958601 D 398579 CDS YP_001501478.1 157961444 5662015 1959484..1960749 1 NC_009901.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: she:Shewmr4_1427 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1960749 5662015 Spea_1618 Shewanella pealeana ATCC 700345 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_001501478.1 1959484 D 398579 CDS YP_001501479.1 157961445 5662016 1960742..1961371 1 NC_009901.1 PFAM: Sporulation domain protein; KEGG: saz:Sama_2148 sporulation related; sporulation domain-containing protein 1961371 5662016 Spea_1619 Shewanella pealeana ATCC 700345 sporulation domain-containing protein YP_001501479.1 1960742 D 398579 CDS YP_001501480.1 157961446 5662017 1961487..1961975 1 NC_009901.1 PFAM: Colicin V production protein; KEGG: sfr:Sfri_1398 colicin V production protein; colicin V production protein 1961975 5662017 Spea_1620 Shewanella pealeana ATCC 700345 colicin V production protein YP_001501480.1 1961487 D 398579 CDS YP_001501481.1 157961447 5662018 1962075..1963589 1 NC_009901.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 1963589 5662018 Spea_1621 Shewanella pealeana ATCC 700345 amidophosphoribosyltransferase YP_001501481.1 1962075 D 398579 CDS YP_001501482.1 157961448 5662019 complement(1963627..1964355) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 1964355 5662019 Spea_1622 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001501482.1 1963627 R 398579 CDS YP_001501483.1 157961449 5662020 complement(1964472..1964855) 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 1964855 5662020 Spea_1623 Shewanella pealeana ATCC 700345 transposase YP_001501483.1 1964472 R 398579 CDS YP_001501484.1 157961450 5662021 complement(1965008..1965274) 1 NC_009901.1 hypothetical protein 1965274 5662021 Spea_1624 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501484.1 1965008 R 398579 CDS YP_001501485.1 157961451 5662022 1965468..1967486 1 NC_009901.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 1967486 5662022 Spea_1625 Shewanella pealeana ATCC 700345 DNA topoisomerase III YP_001501485.1 1965468 D 398579 CDS YP_001501486.1 157961452 5662023 1967581..1968459 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: slo:Shew_2295 transcriptional regulator, AraC family; AraC family transcriptional regulator 1968459 5662023 Spea_1626 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001501486.1 1967581 D 398579 CDS YP_001501487.1 157961453 5662024 1968625..1970703 1 NC_009901.1 KEGG: slo:Shew_2294 hypothetical protein; hypothetical protein 1970703 5662024 Spea_1627 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501487.1 1968625 D 398579 CDS YP_001501488.1 157961454 5662025 1970873..1972909 1 NC_009901.1 KEGG: sde:Sde_2360 putative alpha-glucosidase; putative alpha-glucosidase 1972909 5662025 Spea_1628 Shewanella pealeana ATCC 700345 putative alpha-glucosidase YP_001501488.1 1970873 D 398579 CDS YP_001501489.1 157961455 5662026 complement(1973037..1974908) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: sbl:Sbal_0193 methyl-accepting chemotaxis sensory transducer; Cache sensor containing methyl-accepting chemotaxis sensory transducer 1974908 5662026 Spea_1629 Shewanella pealeana ATCC 700345 Cache sensor containing methyl-accepting chemotaxis sensory transducer YP_001501489.1 1973037 R 398579 CDS YP_001501490.1 157961456 5662027 complement(1975184..1976077) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VFA1086 transcriptional regulators, LysR family; LysR family transcriptional regulator 1976077 5662027 Spea_1630 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501490.1 1975184 R 398579 CDS YP_001501491.1 157961457 5662028 1976323..1977417 1 NC_009901.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 1977417 5662028 Spea_1631 Shewanella pealeana ATCC 700345 galactose-1-phosphate uridylyltransferase YP_001501491.1 1976323 D 398579 CDS YP_001501492.1 157961458 5662029 1977417..1978601 1 NC_009901.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: pha:PSHAa1769 galactokinase; galactokinase 1978601 5662029 Spea_1632 Shewanella pealeana ATCC 700345 galactokinase YP_001501492.1 1977417 D 398579 CDS YP_001501493.1 157961459 5662030 complement(1978685..1978879) 1 NC_009901.1 KEGG: slo:Shew_2284 hypothetical protein; hypothetical protein 1978879 5662030 Spea_1633 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501493.1 1978685 R 398579 CDS YP_001501494.1 157961460 5662031 complement(1979104..1980405) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: slo:Shew_2270 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1980405 5662031 Spea_1634 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001501494.1 1979104 R 398579 CDS YP_001501495.1 157961461 5662032 1980710..1981354 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: shn:Shewana3_1493 beta-lactamase domain protein; beta-lactamase domain-containing protein 1981354 5662032 Spea_1635 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001501495.1 1980710 D 398579 CDS YP_001501496.1 157961462 5662033 1981782..1982270 1 NC_009901.1 PFAM: protein of unknown function DUF1097; KEGG: shn:Shewana3_1498 protein of unknown function DUF1097; hypothetical protein 1982270 5662033 Spea_1636 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501496.1 1981782 D 398579 CDS YP_001501497.1 157961463 5662034 1982571..1984019 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: slo:Shew_2263 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1984019 5662034 Spea_1637 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001501497.1 1982571 D 398579 CDS YP_001501498.1 157961464 5662035 complement(1984185..1984991) 1 NC_009901.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 1984991 5662035 Spea_1638 Shewanella pealeana ATCC 700345 exonuclease III YP_001501498.1 1984185 R 398579 CDS YP_001501499.1 157961465 5662036 complement(1985010..1985309) 1 NC_009901.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 1985309 5662036 Spea_1639 Shewanella pealeana ATCC 700345 YciI-like protein YP_001501499.1 1985010 R 398579 CDS YP_001501500.1 157961466 5662037 complement(1985309..1985854) 1 NC_009901.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 1985854 5662037 Spea_1640 Shewanella pealeana ATCC 700345 intracellular septation protein A YP_001501500.1 1985309 R 398579 CDS YP_001501501.1 157961467 5662038 complement(1986010..1986315) 1 NC_009901.1 hypothetical protein 1986315 5662038 Spea_1641 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501501.1 1986010 R 398579 CDS YP_001501502.1 157961468 5662039 1986539..1986976 1 NC_009901.1 KEGG: sbl:Sbal_3888 TonB family protein; TonB family protein 1986976 5662039 Spea_1642 Shewanella pealeana ATCC 700345 TonB family protein YP_001501502.1 1986539 D 398579 CDS YP_001501503.1 157961469 5662040 complement(1987034..1988437) 1 NC_009901.1 KEGG: ppd:Ppro_0867 cytochrome c family protein; cytochrome c family protein 1988437 5662040 Spea_1643 Shewanella pealeana ATCC 700345 cytochrome c family protein YP_001501503.1 1987034 R 398579 CDS YP_001501504.1 157961470 5662041 1988870..1989748 1 NC_009901.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sdn:Sden_2449 PHP-like protein; phosphotransferase domain-containing protein 1989748 5662041 Spea_1644 Shewanella pealeana ATCC 700345 phosphotransferase domain-containing protein YP_001501504.1 1988870 D 398579 CDS YP_001501505.1 157961471 5662042 1989745..1990365 1 NC_009901.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: slo:Shew_2249 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 1990365 5662042 Spea_1645 Shewanella pealeana ATCC 700345 Sua5/YciO/YrdC/YwlC family protein YP_001501505.1 1989745 D 398579 CDS YP_001501506.1 157961472 5662043 1990483..1991271 1 NC_009901.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: slo:Shew_2248 chromosome segregation and condensation protein ScpA; chromosome segregation and condensation protein ScpA 1991271 5662043 Spea_1646 Shewanella pealeana ATCC 700345 chromosome segregation and condensation protein ScpA YP_001501506.1 1990483 D 398579 CDS YP_001501507.1 157961473 5662044 1991272..1991868 1 NC_009901.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: shw:Sputw3181_1609 putative transcriptional regulator; segregation and condensation protein B 1991868 5662044 Spea_1647 Shewanella pealeana ATCC 700345 segregation and condensation protein B YP_001501507.1 1991272 D 398579 CDS YP_001501508.1 157961474 5662045 1991861..1992733 1 NC_009901.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: slo:Shew_2246 pseudouridine synthase; pseudouridine synthase 1992733 5662045 Spea_1648 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001501508.1 1991861 D 398579 CDS YP_001501509.1 157961475 5662046 complement(1992853..1993590) 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: slo:Shew_2409 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 1993590 5662046 Spea_1649 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001501509.1 1992853 R 398579 CDS YP_001501510.1 157961476 5662047 1993853..1996351 1 NC_009901.1 KEGG: sbl:Sbal_2693 hypothetical protein; hypothetical protein 1996351 5662047 Spea_1650 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501510.1 1993853 D 398579 CDS YP_001501511.1 157961477 5662048 1996502..1997530 1 NC_009901.1 SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 1997530 5662048 Spea_1651 Shewanella pealeana ATCC 700345 putative periplasmic protease YP_001501511.1 1996502 D 398579 CDS YP_001501512.1 157961478 5662049 complement(1999188..1999499) 1 NC_009901.1 PFAM: protein of unknown function DUF437; KEGG: sbl:Sbal_2524 uncharacterised conserved protein UCP029143; hypothetical protein 1999499 5662049 Spea_1652 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501512.1 1999188 R 398579 CDS YP_001501513.1 157961479 5662050 1999942..2000979 1 NC_009901.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cps:CPS_0377 ISCps1, transposase; transposase IS116/IS110/IS902 family protein 2000979 5662050 Spea_1653 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001501513.1 1999942 D 398579 CDS YP_001501514.1 157961480 5662051 2002234..2002935 1 NC_009901.1 KEGG: sdn:Sden_3211 hypothetical protein; hypothetical protein 2002935 5662051 Spea_1654 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501514.1 2002234 D 398579 CDS YP_001501515.1 157961481 5662052 2003873..2004841 1 NC_009901.1 PFAM: dihydrodipicolinate synthetase; KEGG: vpa:VP1335 probable dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2004841 5662052 Spea_1655 Shewanella pealeana ATCC 700345 dihydrodipicolinate synthetase YP_001501515.1 2003873 D 398579 CDS YP_001501516.1 157961482 5662053 2005072..2006100 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: shm:Shewmr7_1537 transcriptional regulator, AraC family; AraC family transcriptional regulator 2006100 5662053 Spea_1656 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001501516.1 2005072 D 398579 CDS YP_001501517.1 157961483 5662054 complement(2006118..2007305) 1 NC_009901.1 KEGG: son:SO_2931 hypothetical protein; hypothetical protein 2007305 5662054 Spea_1657 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501517.1 2006118 R 398579 CDS YP_001501518.1 157961484 5662055 complement(2007456..2010110) 1 NC_009901.1 KEGG: slo:Shew_2404 hypothetical protein; hypothetical protein 2010110 5662055 Spea_1658 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501518.1 2007456 R 398579 CDS YP_001501519.1 157961485 5664734 complement(2011695..2012324) 1 NC_009901.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sfr:Sfri_2568 arylesterase; arylesterase 2012324 5664734 Spea_1660 Shewanella pealeana ATCC 700345 arylesterase YP_001501519.1 2011695 R 398579 CDS YP_001501520.1 157961486 5662057 2012305..2013048 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2402 ABC transporter-related protein; ABC transporter-like protein 2013048 5662057 Spea_1661 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001501520.1 2012305 D 398579 CDS YP_001501521.1 157961487 5662058 2013039..2015492 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: shm:Shewmr7_1545 protein of unknown function DUF214; hypothetical protein 2015492 5662058 Spea_1662 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501521.1 2013039 D 398579 CDS YP_001501522.1 157961488 5662059 complement(2015581..2016486) 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; domain of unknown function DUF1731; KEGG: sfr:Sfri_2559 hypothetical protein; hypothetical protein 2016486 5662059 Spea_1663 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501522.1 2015581 R 398579 CDS YP_001501523.1 157961489 5662060 complement(2016548..2016919) 1 NC_009901.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2016919 folX 5662060 folX Shewanella pealeana ATCC 700345 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_001501523.1 2016548 R 398579 CDS YP_001501524.1 157961490 5662061 2017009..2018157 1 NC_009901.1 PFAM: protein of unknown function UPF0118; KEGG: slo:Shew_2398 protein of unknown function UPF0118; hypothetical protein 2018157 5662061 Spea_1665 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501524.1 2017009 D 398579 CDS YP_001501525.1 157961491 5662062 2018179..2019090 1 NC_009901.1 KEGG: sfr:Sfri_2556 hypothetical protein; hypothetical protein 2019090 5662062 Spea_1666 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501525.1 2018179 D 398579 CDS YP_001501526.1 157961492 5662063 complement(2019657..2020121) 1 NC_009901.1 KEGG: shw:Sputw3181_1625 hypothetical protein; hypothetical protein 2020121 5662063 Spea_1667 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501526.1 2019657 R 398579 CDS YP_001501527.1 157961493 5662064 complement(2020751..2022898) 1 NC_009901.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 2022898 5662064 Spea_1668 Shewanella pealeana ATCC 700345 phosphate acetyltransferase YP_001501527.1 2020751 R 398579 CDS YP_001501528.1 157961494 5662065 complement(2023001..2024197) 1 NC_009901.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 2024197 5662065 Spea_1669 Shewanella pealeana ATCC 700345 acetate kinase YP_001501528.1 2023001 R 398579 CDS YP_001501529.1 157961495 5662066 2024393..2024836 1 NC_009901.1 PFAM: protein of unknown function DUF412; KEGG: son:SO_2914 hypothetical protein; hypothetical protein 2024836 5662066 Spea_1670 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501529.1 2024393 D 398579 CDS YP_001501530.1 157961496 5662067 complement(2024862..2025602) 1 NC_009901.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 2025602 pflA 5662067 pflA Shewanella pealeana ATCC 700345 pyruvate formate lyase-activating enzyme 1 YP_001501530.1 2024862 R 398579 CDS YP_001501531.1 157961497 5662068 complement(2025667..2027949) 1 NC_009901.1 KEGG: slo:Shew_2390 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; formate acetyltransferase 2027949 5662068 Spea_1672 Shewanella pealeana ATCC 700345 formate acetyltransferase YP_001501531.1 2025667 R 398579 CDS YP_001501532.1 157961498 5662069 complement(2028503..2030035) 1 NC_009901.1 KEGG: slo:Shew_2389 hypothetical protein; hypothetical protein 2030035 5662069 Spea_1673 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501532.1 2028503 R 398579 CDS YP_001501533.1 157961499 5662070 2030945..2032426 1 NC_009901.1 PFAM: formate/nitrite transporter; CBS domain containing protein; KEGG: shw:Sputw3181_1633 formate/nitrite transporter; formate/nitrite transporter 2032426 5662070 Spea_1674 Shewanella pealeana ATCC 700345 formate/nitrite transporter YP_001501533.1 2030945 D 398579 CDS YP_001501534.1 157961500 5662071 complement(2032478..2033383) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shw:Sputw3181_1634 transcriptional regulator, LysR family; LysR family transcriptional regulator 2033383 5662071 Spea_1675 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501534.1 2032478 R 398579 CDS YP_001501535.1 157961501 5662072 2033805..2034002 1 NC_009901.1 KEGG: dps:DP0461 hypothetical protein; hypothetical protein 2034002 5662072 Spea_1676 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501535.1 2033805 D 398579 CDS YP_001501536.1 157961502 5662073 2033989..2035428 1 NC_009901.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 2035428 panF 5662073 panF Shewanella pealeana ATCC 700345 sodium/panthothenate symporter YP_001501536.1 2033989 D 398579 CDS YP_001501537.1 157961503 5662074 2035508..2037052 1 NC_009901.1 PFAM: C4-dicarboxylate anaerobic carrier; KEGG: shn:Shewana3_1557 C4-dicarboxylate anaerobic carrier; hypothetical protein 2037052 5662074 Spea_1678 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501537.1 2035508 D 398579 CDS YP_001501538.1 157961504 5662075 complement(2037215..2038207) 1 NC_009901.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: shw:Sputw3181_1637 C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein 2038207 5662075 Spea_1679 Shewanella pealeana ATCC 700345 C4-dicarboxylate transporter/malic acid transport protein YP_001501538.1 2037215 R 398579 CDS YP_001501539.1 157961505 5662076 complement(2038383..2039456) 1 NC_009901.1 KEGG: sfr:Sfri_2128 O-methyltransferase, putative; O-methyltransferase 2039456 5662076 Spea_1680 Shewanella pealeana ATCC 700345 O-methyltransferase YP_001501539.1 2038383 R 398579 CDS YP_001501540.1 157961506 5662077 2039629..2040306 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_2383 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 2040306 5662077 Spea_1681 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001501540.1 2039629 D 398579 CDS YP_001501541.1 157961507 5662078 complement(2040338..2041306) 1 NC_009901.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: slo:Shew_2382 cysteine synthase A; cysteine synthase A 2041306 5662078 Spea_1682 Shewanella pealeana ATCC 700345 cysteine synthase A YP_001501541.1 2040338 R 398579 CDS YP_001501542.1 157961508 5662079 2041544..2042818 1 NC_009901.1 PFAM: RDD domain containing protein; KEGG: sbl:Sbal_2662 RDD domain containing protein; RDD domain-containing protein 2042818 5662079 Spea_1683 Shewanella pealeana ATCC 700345 RDD domain-containing protein YP_001501542.1 2041544 D 398579 CDS YP_001501543.1 157961509 5662080 2043017..2044219 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: saz:Sama_1511 response regulator receiver protein; response regulator receiver modulated diguanylate cyclase 2044219 5662080 Spea_1684 Shewanella pealeana ATCC 700345 response regulator receiver modulated diguanylate cyclase YP_001501543.1 2043017 D 398579 CDS YP_001501544.1 157961510 5662081 complement(2044344..2046680) 1 NC_009901.1 KEGG: sfr:Sfri_2465 hypothetical protein; hypothetical protein 2046680 5662081 Spea_1685 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501544.1 2044344 R 398579 CDS YP_001501545.1 157961511 5662082 complement(2046892..2047665) 1 NC_009901.1 putative role in sulfur assimilation; putative sulfate transport protein CysZ 2047665 5662082 Spea_1686 Shewanella pealeana ATCC 700345 putative sulfate transport protein CysZ YP_001501545.1 2046892 R 398579 CDS YP_001501546.1 157961512 5662083 2047856..2051278 1 NC_009901.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: slo:Shew_2379 chromosome segregation protein SMC; chromosome segregation protein SMC 2051278 5662083 Spea_1687 Shewanella pealeana ATCC 700345 chromosome segregation protein SMC YP_001501546.1 2047856 D 398579 CDS YP_001501547.1 157961513 5662084 2051302..2052279 1 NC_009901.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region; KEGG: slo:Shew_2378 cell division protein ZipA; cell division protein ZipA 2052279 5662084 Spea_1688 Shewanella pealeana ATCC 700345 cell division protein ZipA YP_001501547.1 2051302 D 398579 CDS YP_001501548.1 157961514 5662085 2052358..2054364 1 NC_009901.1 KEGG: slo:Shew_2377 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase; NAD-dependent DNA ligase 2054364 5662085 Spea_1689 Shewanella pealeana ATCC 700345 NAD-dependent DNA ligase YP_001501548.1 2052358 D 398579 CDS YP_001501549.1 157961515 5662086 2054495..2054971 1 NC_009901.1 KEGG: son:SO_2863 hypothetical protein; hypothetical protein 2054971 5662086 Spea_1690 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501549.1 2054495 D 398579 CDS YP_001501550.1 157961516 5662087 2055549..2056745 1 NC_009901.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: shn:Shewana3_1571 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2056745 5662087 Spea_1691 Shewanella pealeana ATCC 700345 metal dependent phosphohydrolase YP_001501550.1 2055549 D 398579 CDS YP_001501551.1 157961517 5662088 2056862..2057746 1 NC_009901.1 KEGG: sfr:Sfri_2458 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2057746 5662088 Spea_1692 Shewanella pealeana ATCC 700345 NAD-dependent epimerase/dehydratase YP_001501551.1 2056862 D 398579 CDS YP_001501552.1 157961518 5662089 2057801..2058433 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: son:SO_2860 thiol:disulfide interchange protein, DsbA family; DSBA oxidoreductase 2058433 5662089 Spea_1693 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001501552.1 2057801 D 398579 CDS YP_001501553.1 157961519 5662090 2058689..2059627 1 NC_009901.1 SMART: protein phosphatase 2C domain protein; KEGG: stt:t4521 hypothetical protein; protein serine/threonine phosphatase 2059627 5662090 Spea_1694 Shewanella pealeana ATCC 700345 protein serine/threonine phosphatase YP_001501553.1 2058689 D 398579 CDS YP_001501554.1 157961520 5662091 2060031..2060297 1 NC_009901.1 KEGG: slo:Shew_2372 hypothetical protein; hypothetical protein 2060297 5662091 Spea_1695 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501554.1 2060031 D 398579 CDS YP_001501555.1 157961521 5662092 2060337..2062055 1 NC_009901.1 PFAM: Na+/solute symporter; KEGG: slo:Shew_2371 Na+/solute symporter; Na+/solute symporter 2062055 5662092 Spea_1696 Shewanella pealeana ATCC 700345 Na+/solute symporter YP_001501555.1 2060337 D 398579 CDS YP_001501556.1 157961522 5662093 2062596..2064443 1 NC_009901.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294 nucleotidyltransferase putative; KEGG: slo:Shew_2369 cyclic nucleotide-binding protein; hypothetical protein 2064443 5662093 Spea_1697 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501556.1 2062596 D 398579 CDS YP_001501557.1 157961523 5662094 2064506..2065192 1 NC_009901.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: sbl:Sbal_2636 exonuclease, RNase T and DNA polymerase III; exonuclease RNase T and DNA polymerase III 2065192 5662094 Spea_1698 Shewanella pealeana ATCC 700345 exonuclease RNase T and DNA polymerase III YP_001501557.1 2064506 D 398579 CDS YP_001501558.1 157961524 5662095 2065361..2065942 1 NC_009901.1 KEGG: slo:Shew_2367 hypothetical protein; hypothetical protein 2065942 5662095 Spea_1699 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501558.1 2065361 D 398579 CDS YP_001501559.1 157961525 5662096 complement(2066038..2067102) 1 NC_009901.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 2067102 5662096 Spea_1700 Shewanella pealeana ATCC 700345 3-oxoacyl-ACP synthase YP_001501559.1 2066038 R 398579 CDS YP_001501560.1 157961526 5662097 complement(2067203..2067874) 1 NC_009901.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: slo:Shew_2365 transcriptional regulator, GntR family; GntR family transcriptional regulator 2067874 5662097 Spea_1701 Shewanella pealeana ATCC 700345 GntR family transcriptional regulator YP_001501560.1 2067203 R 398579 CDS YP_001501561.1 157961527 5662098 complement(2067982..2069547) 1 NC_009901.1 PFAM: aldehyde dehydrogenase; KEGG: slo:Shew_2364 aldehyde dehydrogenase; aldehyde dehydrogenase 2069547 5662098 Spea_1702 Shewanella pealeana ATCC 700345 aldehyde dehydrogenase YP_001501561.1 2067982 R 398579 CDS YP_001501562.1 157961528 5662099 complement(2069591..2070592) 1 NC_009901.1 PFAM: proline racemase; KEGG: slo:Shew_2363 proline racemase; hydroxyproline-2-epimerase 2070592 5662099 Spea_1703 Shewanella pealeana ATCC 700345 hydroxyproline-2-epimerase YP_001501562.1 2069591 R 398579 CDS YP_001501563.1 157961529 5662100 complement(2070754..2070954) 1 NC_009901.1 KEGG: slo:Shew_2362 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2070954 5662100 Spea_1704 Shewanella pealeana ATCC 700345 dihydrodipicolinate synthase YP_001501563.1 2070754 R 398579 CDS YP_001501564.1 157961530 5662101 2071143..2072183 1 NC_009901.1 PFAM: proline racemase; KEGG: slo:Shew_2361 proline racemase; proline racemase 2072183 5662101 Spea_1705 Shewanella pealeana ATCC 700345 proline racemase YP_001501564.1 2071143 D 398579 CDS YP_001501565.1 157961531 5662102 2072218..2073480 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: slo:Shew_2360 D-amino-acid dehydrogenase; FAD dependent oxidoreductase 2073480 5662102 Spea_1706 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001501565.1 2072218 D 398579 CDS YP_001501566.1 157961532 5662103 complement(2073600..2074826) 1 NC_009901.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ilo:IL1385 predicted NAD/FAD-binding protein; amine oxidase 2074826 5662103 Spea_1707 Shewanella pealeana ATCC 700345 amine oxidase YP_001501566.1 2073600 R 398579 CDS YP_001501567.1 157961533 5662104 complement(2074870..2076399) 1 NC_009901.1 KEGG: ana:alr4631 unknown protein; hypothetical protein 2076399 5662104 Spea_1708 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501567.1 2074870 R 398579 CDS YP_001501568.1 157961534 5662105 2076622..2076846 1 NC_009901.1 KEGG: pin:Ping_1766 hypothetical protein; hypothetical protein 2076846 5662105 Spea_1709 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501568.1 2076622 D 398579 CDS YP_001501569.1 157961535 5662106 complement(2076957..2078213) 1 NC_009901.1 PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: lpn:lpg0281 amino acid transporter; amino acid permease-associated protein 2078213 5662106 Spea_1710 Shewanella pealeana ATCC 700345 amino acid permease-associated protein YP_001501569.1 2076957 R 398579 CDS YP_001501570.1 157961536 5662107 complement(2078400..2079704) 1 NC_009901.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: slo:Shew_2358 peptidase M24; peptidase M24 2079704 5662107 Spea_1711 Shewanella pealeana ATCC 700345 peptidase M24 YP_001501570.1 2078400 R 398579 CDS YP_001501571.1 157961537 5662108 2079870..2080424 1 NC_009901.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 2080424 5662108 Spea_1712 Shewanella pealeana ATCC 700345 D,D-heptose 1,7-bisphosphate phosphatase YP_001501571.1 2079870 D 398579 CDS YP_001501572.1 157961538 5664738 complement(2086795..2086914) 1 NC_009901.1 KEGG: vvy:VV3174 transposase and inactivated derivative; transposase and inactivated derivative 2086914 5664738 Spea_1714 Shewanella pealeana ATCC 700345 transposase and inactivated derivative YP_001501572.1 2086795 R 398579 CDS YP_001501573.1 157961539 5662110 complement(2086995..2087495) 1 NC_009901.1 KEGG: son:SO_4210 hypothetical protein; hypothetical protein 2087495 5662110 Spea_1715 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501573.1 2086995 R 398579 CDS YP_001501574.1 157961540 5662111 complement(2087694..2088572) 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aha:AHA_0961 hypothetical protein; hypothetical protein 2088572 5662111 Spea_1716 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501574.1 2087694 R 398579 CDS YP_001501575.1 157961541 5662112 complement(2088632..2089894) 1 NC_009901.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: aha:AHA_0959 nucleoside permease; nucleoside transporter 2089894 5662112 Spea_1717 Shewanella pealeana ATCC 700345 nucleoside transporter YP_001501575.1 2088632 R 398579 CDS YP_001501576.1 157961542 5662113 complement(2089906..2090739) 1 NC_009901.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation; purine nucleoside phosphorylase 2090739 5662113 Spea_1718 Shewanella pealeana ATCC 700345 purine nucleoside phosphorylase YP_001501576.1 2089906 R 398579 CDS YP_001501577.1 157961543 5662114 2090944..2091921 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aha:AHA_0957 HTH-type transcriptional regulator XapR; LysR family transcriptional regulator 2091921 5662114 Spea_1719 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501577.1 2090944 D 398579 CDS YP_001501578.1 157961544 5662115 complement(2091983..2092657) 1 NC_009901.1 KEGG: shm:Shewmr7_1590 hypothetical protein; hypothetical protein 2092657 5662115 Spea_1720 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501578.1 2091983 R 398579 CDS YP_001501579.1 157961545 5662116 2092785..2093189 1 NC_009901.1 KEGG: slo:Shew_2354 hypothetical protein; hypothetical protein 2093189 5662116 Spea_1721 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501579.1 2092785 D 398579 CDS YP_001501580.1 157961546 5662117 2093300..2094247 1 NC_009901.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: shm:Shewmr7_1720 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 2094247 5662117 Spea_1722 Shewanella pealeana ATCC 700345 magnesium and cobalt transport protein CorA YP_001501580.1 2093300 D 398579 CDS YP_001501581.1 157961547 5662118 complement(2094322..2094654) 1 NC_009901.1 KEGG: slo:Shew_2352 hypothetical protein; hypothetical protein 2094654 5662118 Spea_1723 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501581.1 2094322 R 398579 CDS YP_001501582.1 157961548 5662119 complement(2094730..2095989) 1 NC_009901.1 KEGG: shn:Shewana3_1721 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 2095989 5662119 Spea_1724 Shewanella pealeana ATCC 700345 metal dependent phosphohydrolase YP_001501582.1 2094730 R 398579 CDS YP_001501583.1 157961549 5662120 complement(2096355..2097128) 1 NC_009901.1 KEGG: vfi:VFA0845 hypothetical protein; hypothetical protein 2097128 5662120 Spea_1725 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501583.1 2096355 R 398579 CDS YP_001501584.1 157961550 5662121 complement(2097272..2099323) 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: vvy:VVA1356 alkyl sulfatase; beta-lactamase domain-containing protein 2099323 5662121 Spea_1726 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001501584.1 2097272 R 398579 CDS YP_001501585.1 157961551 5662122 2099532..2100446 1 NC_009901.1 PFAM: regulatory protein LysR; KEGG: ppr:PBPRB0854 hypothetical transcriptional regulator; LysR family transcriptional regulator 2100446 5662122 Spea_1727 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501585.1 2099532 D 398579 CDS YP_001501586.1 157961552 5662123 complement(2100616..2101758) 1 NC_009901.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: csa:Csal_3004 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 2101758 5662123 Spea_1728 Shewanella pealeana ATCC 700345 aromatic hydrocarbon degradation membrane protein YP_001501586.1 2100616 R 398579 CDS YP_001501587.1 157961553 5662124 complement(2101826..2104951) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: pha:PSHAb0438 putative metabolite exporter, AcrB/D/F family; acriflavin resistance protein 2104951 5662124 Spea_1729 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501587.1 2101826 R 398579 CDS YP_001501588.1 157961554 5662125 complement(2104951..2106057) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ilo:IL0466 RND efflux system membrane fusion protein; RND family efflux transporter MFP subunit 2106057 5662125 Spea_1730 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501588.1 2104951 R 398579 CDS YP_001501589.1 157961555 5662126 complement(2106115..2106915) 1 NC_009901.1 KEGG: vfi:VFA0845 hypothetical protein; hypothetical protein 2106915 5662126 Spea_1731 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501589.1 2106115 R 398579 CDS YP_001501590.1 157961556 5662127 complement(2107242..2108423) 1 NC_009901.1 PFAM: Radical SAM domain protein; KEGG: vfi:VFA0208 arylsulfatase regulator (Fe-S oxidoreductase); radical SAM domain-containing protein 2108423 5662127 Spea_1732 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001501590.1 2107242 R 398579 CDS YP_001501591.1 157961557 5662128 complement(2108502..2109134) 1 NC_009901.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: sfu:Sfum_1664 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2109134 5662128 Spea_1733 Shewanella pealeana ATCC 700345 two component LuxR family transcriptional regulator YP_001501591.1 2108502 R 398579 CDS YP_001501592.1 157961558 5662129 complement(2109241..2110434) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: sat:SYN_01954 signal transduction histidine kinase; histidine kinase 2110434 5662129 Spea_1734 Shewanella pealeana ATCC 700345 histidine kinase YP_001501592.1 2109241 R 398579 CDS YP_001501593.1 157961559 5662130 2110589..2112115 1 NC_009901.1 PFAM: sulfatase; KEGG: rle:RL1911 putative arylsulfatase; sulfatase 2112115 5662130 Spea_1735 Shewanella pealeana ATCC 700345 sulfatase YP_001501593.1 2110589 D 398579 CDS YP_001501594.1 157961560 5662131 2112217..2113179 1 NC_009901.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pat:Patl_1662 ATPase associated with various cellular activities, AAA_3; ATPase 2113179 5662131 Spea_1736 Shewanella pealeana ATCC 700345 ATPase YP_001501594.1 2112217 D 398579 CDS YP_001501595.1 157961561 5662132 2113197..2114117 1 NC_009901.1 KEGG: vpa:VPA0686 hypothetical protein; hypothetical protein 2114117 5662132 Spea_1737 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501595.1 2113197 D 398579 CDS YP_001501596.1 157961562 5662133 2114149..2114604 1 NC_009901.1 hypothetical protein 2114604 5662133 Spea_1738 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501596.1 2114149 D 398579 CDS YP_001501597.1 157961563 5662134 2114598..2115584 1 NC_009901.1 PFAM: von Willebrand factor type A; KEGG: cps:CPS_2991 von Willebrand factor type A domain protein; von Willebrand factor type A 2115584 5662134 Spea_1739 Shewanella pealeana ATCC 700345 von Willebrand factor type A YP_001501597.1 2114598 D 398579 CDS YP_001501598.1 157961564 5662135 2115577..2117271 1 NC_009901.1 KEGG: vfi:VFA0904 hypothetical protein; hypothetical protein 2117271 5662135 Spea_1740 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501598.1 2115577 D 398579 CDS YP_001501599.1 157961565 5662136 2117271..2118509 1 NC_009901.1 KEGG: pfl:PFL_2844 hypothetical protein; hypothetical protein 2118509 5662136 Spea_1741 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501599.1 2117271 D 398579 CDS YP_001501600.1 157961566 5662137 2118642..2119049 1 NC_009901.1 hypothetical protein 2119049 5662137 Spea_1742 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501600.1 2118642 D 398579 CDS YP_001501601.1 157961567 5662138 2119054..2120787 1 NC_009901.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: vvy:VVA0670 hypothetical protein; type I phosphodiesterase/nucleotide pyrophosphatase 2120787 5662138 Spea_1743 Shewanella pealeana ATCC 700345 type I phosphodiesterase/nucleotide pyrophosphatase YP_001501601.1 2119054 D 398579 CDS YP_001501602.1 157961568 5662139 2121344..2122039 1 NC_009901.1 PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; KEGG: son:SO_1944 hypothetical protein; 2OG-Fe(II) oxygenase 2122039 5662139 Spea_1744 Shewanella pealeana ATCC 700345 2OG-Fe(II) oxygenase YP_001501602.1 2121344 D 398579 CDS YP_001501603.1 157961569 5662140 complement(2122127..2123479) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sbl:Sbal_2502 integral membrane sensor signal transduction histidine kinase; histidine kinase 2123479 5662140 Spea_1745 Shewanella pealeana ATCC 700345 histidine kinase YP_001501603.1 2122127 R 398579 CDS YP_001501604.1 157961570 5662141 complement(2123470..2124144) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_2348 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2124144 5662141 Spea_1746 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001501604.1 2123470 R 398579 CDS YP_001501605.1 157961571 5662142 2124429..2125283 1 NC_009901.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: saz:Sama_1543 putative phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein 2125283 5662142 Spea_1747 Shewanella pealeana ATCC 700345 phosphonate ABC transporter periplasmic phosphonate-binding protein YP_001501605.1 2124429 D 398579 CDS YP_001501606.1 157961572 5662143 2125305..2126135 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_2346 ABC transporter-related protein; ABC transporter-like protein 2126135 5662143 Spea_1748 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001501606.1 2125305 D 398579 CDS YP_001501607.1 157961573 5662144 2126158..2127687 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_2345 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 2127687 5662144 Spea_1749 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001501607.1 2126158 D 398579 CDS YP_001501608.1 157961574 5662145 complement(2127775..2128119) 1 NC_009901.1 KEGG: slo:Shew_2344 hypothetical protein; hypothetical protein 2128119 5662145 Spea_1750 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501608.1 2127775 R 398579 CDS YP_001501609.1 157961575 5662146 2129017..2129367 1 NC_009901.1 TIGRFAM: Phasin family protein; KEGG: ppr:PBPRB1839 hypothetical protein; phasin family protein 2129367 5662146 Spea_1751 Shewanella pealeana ATCC 700345 phasin family protein YP_001501609.1 2129017 D 398579 CDS YP_001501610.1 157961576 5662147 2129463..2131217 1 NC_009901.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: ppr:PBPRB1838 polyhydroxyalkanoic acid synthase; poly(R)-hydroxyalkanoic acid synthase 2131217 5662147 Spea_1752 Shewanella pealeana ATCC 700345 poly(R)-hydroxyalkanoic acid synthase YP_001501610.1 2129463 D 398579 CDS YP_001501611.1 157961577 5662148 2131207..2131608 1 NC_009901.1 PFAM: MaoC domain protein dehydratase; KEGG: aha:AHA_2422 enoyl-CoA hydratase; dehydratase 2131608 5662148 Spea_1753 Shewanella pealeana ATCC 700345 dehydratase YP_001501611.1 2131207 D 398579 CDS YP_001501612.1 157961578 5662149 complement(2132078..2132845) 1 NC_009901.1 KEGG: sdn:Sden_1364 hypothetical protein; hypothetical protein 2132845 5662149 Spea_1754 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501612.1 2132078 R 398579 CDS YP_001501613.1 157961579 5662150 2133239..2134972 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_2342 integral membrane sensor signal transduction histidine kinase; histidine kinase 2134972 5662150 Spea_1755 Shewanella pealeana ATCC 700345 histidine kinase YP_001501613.1 2133239 D 398579 CDS YP_001501614.1 157961580 5662151 2134969..2136321 1 NC_009901.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: slo:Shew_2341 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma54 specific transcriptional regulator 2136321 5662151 Spea_1756 Shewanella pealeana ATCC 700345 Fis family two component sigma54 specific transcriptional regulator YP_001501614.1 2134969 D 398579 CDS YP_001501615.1 157961581 5662152 complement(2136378..2137022) 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: slo:Shew_1462 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 2137022 5662152 Spea_1757 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001501615.1 2136378 R 398579 CDS YP_001501616.1 157961582 5662153 2137233..2138063 1 NC_009901.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2138063 nadE 5662153 nadE Shewanella pealeana ATCC 700345 NAD synthetase YP_001501616.1 2137233 D 398579 CDS YP_001501617.1 157961583 5662154 complement(2138180..2138659) 1 NC_009901.1 KEGG: shw:Sputw3181_1715 hypothetical protein; hypothetical protein 2138659 5662154 Spea_1759 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501617.1 2138180 R 398579 CDS YP_001501618.1 157961584 5662155 2138746..2140185 1 NC_009901.1 KEGG: sfr:Sfri_1544 lysophospholipase-like protein; lysophospholipase-like protein 2140185 5662155 Spea_1760 Shewanella pealeana ATCC 700345 lysophospholipase-like protein YP_001501618.1 2138746 D 398579 CDS YP_001501619.1 157961585 5662156 complement(2140310..2142472) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_1467 diguanylate cyclase; diguanylate cyclase 2142472 5662156 Spea_1761 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001501619.1 2140310 R 398579 CDS YP_001501620.1 157961586 5662157 2142913..2143137 1 NC_009901.1 KEGG: slo:Shew_2961 hypothetical protein; hypothetical protein 2143137 5662157 Spea_1762 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501620.1 2142913 D 398579 CDS YP_001501621.1 157961587 5664739 complement(2143485..2145269) 1 NC_009901.1 PFAM: sulfatase; KEGG: shn:Shewana3_2428 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; sulfatase 2145269 5664739 Spea_1763 Shewanella pealeana ATCC 700345 sulfatase YP_001501621.1 2143485 R 398579 CDS YP_001501622.1 157961588 5662159 complement(2145353..2145568) 1 NC_009901.1 PFAM: protein of unknown function DUF1414; KEGG: shn:Shewana3_2427 protein of unknown function DUF1414; hypothetical protein 2145568 5662159 Spea_1764 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501622.1 2145353 R 398579 CDS YP_001501623.1 157961589 5662160 2146033..2147061 1 NC_009901.1 PFAM: 37kDa nucleoid-associated protein; KEGG: slo:Shew_1472 37 kDa nucleoid-associated protein; nucleoid-associated protein NdpA 2147061 5662160 Spea_1765 Shewanella pealeana ATCC 700345 nucleoid-associated protein NdpA YP_001501623.1 2146033 D 398579 CDS YP_001501624.1 157961590 5662161 2147346..2148221 1 NC_009901.1 KEGG: slo:Shew_1473 hypothetical protein; hypothetical protein 2148221 5662161 Spea_1766 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501624.1 2147346 D 398579 CDS YP_001501625.1 157961591 5662162 2148259..2149101 1 NC_009901.1 PFAM: peptidase M23B; KEGG: slo:Shew_1474 peptidase M23B; peptidase M23B 2149101 5662162 Spea_1767 Shewanella pealeana ATCC 700345 peptidase M23B YP_001501625.1 2148259 D 398579 CDS YP_001501626.1 157961592 5662163 complement(2149178..2149684) 1 NC_009901.1 KEGG: slo:Shew_1636 hypothetical protein; hypothetical protein 2149684 5662163 Spea_1768 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501626.1 2149178 R 398579 CDS YP_001501627.1 157961593 5662164 2149716..2152154 1 NC_009901.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: sbm:Shew185_1667 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-like competence protein ComEC/Rec2 2152154 5662164 Spea_1769 Shewanella pealeana ATCC 700345 DNA internalization-like competence protein ComEC/Rec2 YP_001501627.1 2149716 D 398579 CDS YP_001501628.1 157961594 5662165 2152187..2154010 1 NC_009901.1 KEGG: sbm:Shew185_1668 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter ATPase/inner membrane subunits MsbA 2154010 5662165 Spea_1770 Shewanella pealeana ATCC 700345 lipid A ABC exporter ATPase/inner membrane subunits MsbA YP_001501628.1 2152187 D 398579 CDS YP_001501629.1 157961595 5662166 2154011..2155003 1 NC_009901.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2155003 lpxK 5662166 lpxK Shewanella pealeana ATCC 700345 tetraacyldisaccharide 4'-kinase YP_001501629.1 2154011 D 398579 CDS YP_001501630.1 157961596 5662167 2155015..2155188 1 NC_009901.1 PFAM: protein of unknown function DUF343; KEGG: son:SO_2800 hypothetical protein; hypothetical protein 2155188 5662167 Spea_1772 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501630.1 2155015 D 398579 CDS YP_001501631.1 157961597 5662168 2155634..2158717 1 NC_009901.1 PFAM: Peptidase M11 gametolysin; KEGG: slo:Shew_1642 peptidase M11, gametolysin; peptidase M11 gametolysin 2158717 5662168 Spea_1773 Shewanella pealeana ATCC 700345 peptidase M11 gametolysin YP_001501631.1 2155634 D 398579 CDS YP_001501632.1 157961598 5662169 complement(2158857..2161271) 1 NC_009901.1 KEGG: slo:Shew_1643 hypothetical protein; hypothetical protein 2161271 5662169 Spea_1774 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501632.1 2158857 R 398579 CDS YP_001501633.1 157961599 5662170 complement(2162047..2162838) 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: slo:Shew_1644 DsbA oxidoreductase; DSBA oxidoreductase 2162838 5662170 Spea_1775 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001501633.1 2162047 R 398579 CDS YP_001501634.1 157961600 5662171 complement(2162881..2164251) 1 NC_009901.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: slo:Shew_1645 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 2164251 5662171 Spea_1776 Shewanella pealeana ATCC 700345 sigma-54 dependent trancsriptional regulator YP_001501634.1 2162881 R 398579 CDS YP_001501635.1 157961601 5662172 complement(2164510..2166825) 1 NC_009901.1 KEGG: vpa:VP1135 hypothetical protein; hypothetical protein 2166825 5662172 Spea_1777 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501635.1 2164510 R 398579 CDS YP_001501636.1 157961602 5662173 complement(2167162..2168601) 1 NC_009901.1 KEGG: slo:Shew_0958 hypothetical protein; hypothetical protein 2168601 5662173 Spea_1778 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501636.1 2167162 R 398579 CDS YP_001501637.1 157961603 5662174 complement(2168876..2171953) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: slo:Shew_1647 acriflavin resistance protein; acriflavin resistance protein 2171953 5662174 Spea_1779 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501637.1 2168876 R 398579 CDS YP_001501638.1 157961604 5662175 complement(2171950..2175258) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: slo:Shew_1648 acriflavin resistance protein; acriflavin resistance protein 2175258 5662175 Spea_1780 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501638.1 2171950 R 398579 CDS YP_001501639.1 157961605 5662176 complement(2175365..2176471) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_1649 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2176471 5662176 Spea_1781 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501639.1 2175365 R 398579 CDS YP_001501640.1 157961606 5662177 complement(2176888..2176983) 1 NC_009901.1 KEGG: shw:Sputw3181_1734 citrate synthase I; citrate synthase I 2176983 5662177 Spea_1782 Shewanella pealeana ATCC 700345 citrate synthase I YP_001501640.1 2176888 R 398579 CDS YP_001501641.1 157961607 5662178 complement(2177495..2178784) 1 NC_009901.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2178784 gltA 5662178 gltA Shewanella pealeana ATCC 700345 type II citrate synthase YP_001501641.1 2177495 R 398579 CDS YP_001501642.1 157961608 5662179 2179217..2179591 1 NC_009901.1 TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: slo:Shew_1651 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase cytochrome b556 subunit 2179591 5662179 Spea_1784 Shewanella pealeana ATCC 700345 succinate dehydrogenase cytochrome b556 subunit YP_001501642.1 2179217 D 398579 CDS YP_001501643.1 157961609 5662180 2179579..2179932 1 NC_009901.1 TIGRFAM: Succinate dehydrogenase hydrophobic membrane anchor; KEGG: shw:Sputw3181_1736 conserved hypothetical succinate dehydrogenase, hydrophobic subunit; succinate dehydrogenase hydrophobic membrane anchor 2179932 5662180 Spea_1785 Shewanella pealeana ATCC 700345 succinate dehydrogenase hydrophobic membrane anchor YP_001501643.1 2179579 D 398579 CDS YP_001501644.1 157961610 5662181 2179933..2181699 1 NC_009901.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2181699 sdhA 5662181 sdhA Shewanella pealeana ATCC 700345 succinate dehydrogenase flavoprotein subunit YP_001501644.1 2179933 D 398579 CDS YP_001501645.1 157961611 5662182 2181712..2182419 1 NC_009901.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2182419 sdhB 5662182 sdhB Shewanella pealeana ATCC 700345 succinate dehydrogenase iron-sulfur subunit YP_001501645.1 2181712 D 398579 CDS YP_001501646.1 157961612 5662183 2182627..2185449 1 NC_009901.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2185449 sucA 5662183 sucA Shewanella pealeana ATCC 700345 2-oxoglutarate dehydrogenase E1 component YP_001501646.1 2182627 D 398579 CDS YP_001501647.1 157961613 5662184 2185482..2186678 1 NC_009901.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: slo:Shew_1656 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2186678 5662184 Spea_1789 Shewanella pealeana ATCC 700345 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001501647.1 2185482 D 398579 CDS YP_001501648.1 157961614 5662185 2186757..2187923 1 NC_009901.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2187923 sucC 5662185 sucC Shewanella pealeana ATCC 700345 succinyl-CoA synthetase subunit beta YP_001501648.1 2186757 D 398579 CDS YP_001501649.1 157961615 5662186 2187923..2188795 1 NC_009901.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: sdn:Sden_2180 succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha 2188795 5662186 Spea_1791 Shewanella pealeana ATCC 700345 succinyl-CoA synthetase subunit alpha YP_001501649.1 2187923 D 398579 CDS YP_001501650.1 157961616 5662187 2189051..2189359 1 NC_009901.1 KEGG: ppr:PBPRA2342 hypothetical protein; hypothetical protein 2189359 5662187 Spea_1792 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501650.1 2189051 D 398579 CDS YP_001501651.1 157961617 5662188 2189752..2190672 1 NC_009901.1 PFAM: Auxin Efflux Carrier; KEGG: sfr:Sfri_2339 auxin efflux carrier; auxin efflux carrier 2190672 5662188 Spea_1793 Shewanella pealeana ATCC 700345 auxin efflux carrier YP_001501651.1 2189752 D 398579 CDS YP_001501652.1 157961618 5662189 complement(2190673..2192325) 1 NC_009901.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: slo:Shew_1659 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 2192325 5662189 Spea_1794 Shewanella pealeana ATCC 700345 ferredoxin-dependent glutamate synthase YP_001501652.1 2190673 R 398579 CDS YP_001501653.1 157961619 5662190 2192478..2192978 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_1660 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2192978 5662190 Spea_1795 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001501653.1 2192478 D 398579 CDS YP_001501654.1 157961620 5662191 complement(2193048..2193479) 1 NC_009901.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 2193479 fur 5662191 fur Shewanella pealeana ATCC 700345 ferric uptake regulator YP_001501654.1 2193048 R 398579 CDS YP_001501655.1 157961621 5662192 2193748..2194473 1 NC_009901.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2194473 5662192 Spea_1797 Shewanella pealeana ATCC 700345 NAD-dependent deacetylase YP_001501655.1 2193748 D 398579 CDS YP_001501656.1 157961622 5662193 2194546..2195010 1 NC_009901.1 KEGG: son:SO_1939 hypothetical protein; hypothetical protein 2195010 5662193 Spea_1798 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501656.1 2194546 D 398579 CDS YP_001501657.1 157961623 5662194 complement(2195597..2197681) 1 NC_009901.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 2197681 5662194 Spea_1799 Shewanella pealeana ATCC 700345 elongation factor G YP_001501657.1 2195597 R 398579 CDS YP_001501658.1 157961624 5662195 complement(2198094..2199434) 1 NC_009901.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: sdn:Sden_1657 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2199434 5662195 Spea_1800 Shewanella pealeana ATCC 700345 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001501658.1 2198094 R 398579 CDS YP_001501659.1 157961625 5662196 2199684..2200736 1 NC_009901.1 KEGG: shn:Shewana3_2519 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2200736 5662196 Spea_1801 Shewanella pealeana ATCC 700345 biotin synthase YP_001501659.1 2199684 D 398579 CDS YP_001501660.1 157961626 5662197 2201013..2202206 1 NC_009901.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: sbm:Shew185_1752 8-amino-7-oxononanoate synthase; class I/II aminotransferase 2202206 5662197 Spea_1802 Shewanella pealeana ATCC 700345 class I/II aminotransferase YP_001501660.1 2201013 D 398579 CDS YP_001501661.1 157961627 5662198 2202291..2203061 1 NC_009901.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: she:Shewmr4_2357 biotin biosynthesis protein BioC; type 11 methyltransferase 2203061 5662198 Spea_1803 Shewanella pealeana ATCC 700345 type 11 methyltransferase YP_001501661.1 2202291 D 398579 CDS YP_001501662.1 157961628 5662199 2203089..2203754 1 NC_009901.1 KEGG: shm:Shewmr7_2428 dethiobiotin synthase; TIGRFAM: dethiobiotin synthase; PFAM: Cobyrinic acid ac-diamide synthase; dethiobiotin synthase 2203754 5662199 Spea_1804 Shewanella pealeana ATCC 700345 dethiobiotin synthase YP_001501662.1 2203089 D 398579 CDS YP_001501663.1 157961629 5662200 2204080..2204943 1 NC_009901.1 putative metalloprotease; heat shock protein HtpX 2204943 5662200 Spea_1805 Shewanella pealeana ATCC 700345 heat shock protein HtpX YP_001501663.1 2204080 D 398579 CDS YP_001501664.1 157961630 5662201 2205206..2205580 1 NC_009901.1 KEGG: slo:Shew_1724 cytochrome c3; cytochrome c3 2205580 5662201 Spea_1806 Shewanella pealeana ATCC 700345 cytochrome c3 YP_001501664.1 2205206 D 398579 CDS YP_001501665.1 157961631 5662202 2205895..2208810 1 NC_009901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sfr:Sfri_1505 molybdopterin oxidoreductase; molybdopterin oxidoreductase 2208810 5662202 Spea_1807 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase YP_001501665.1 2205895 D 398579 CDS YP_001501666.1 157961632 5662203 2208785..2209759 1 NC_009901.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sfr:Sfri_1506 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 2209759 5662203 Spea_1808 Shewanella pealeana ATCC 700345 uroporphyrin-III C-methyltransferase YP_001501666.1 2208785 D 398579 CDS YP_001501667.1 157961633 5662204 2209848..2211074 1 NC_009901.1 PFAM: glycosyl transferase family 3; KEGG: sfr:Sfri_1507 glycosyl transferase, family 3; glycosyl transferase family protein 2211074 5662204 Spea_1809 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001501667.1 2209848 D 398579 CDS YP_001501668.1 157961634 5662205 2211062..2211652 1 NC_009901.1 PFAM: ANTAR domain protein; KEGG: sfr:Sfri_1508 response regulator receiver and ANTAR domain protein; response regulator receiver/ANTAR domain-containing protein 2211652 5662205 Spea_1810 Shewanella pealeana ATCC 700345 response regulator receiver/ANTAR domain-containing protein YP_001501668.1 2211062 D 398579 CDS YP_001501669.1 157961635 5662206 2212030..2214699 1 NC_009901.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sfr:Sfri_1509 nitrite reductase (NAD(P)H), large subunit; nitrite reductase (NAD(P)H) large subunit 2214699 5662206 Spea_1811 Shewanella pealeana ATCC 700345 nitrite reductase (NAD(P)H) large subunit YP_001501669.1 2212030 D 398579 CDS YP_001501670.1 157961636 5662207 2214696..2215076 1 NC_009901.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: sfr:Sfri_1510 nitrite reductase (NAD(P)H), small subunit; nitrite reductase (NAD(P)H) small subunit 2215076 5662207 Spea_1812 Shewanella pealeana ATCC 700345 nitrite reductase (NAD(P)H) small subunit YP_001501670.1 2214696 D 398579 CDS YP_001501671.1 157961637 5662208 2215078..2216544 1 NC_009901.1 TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sfr:Sfri_1511 nitrite transporter; nitrite transporter 2216544 5662208 Spea_1813 Shewanella pealeana ATCC 700345 nitrite transporter YP_001501671.1 2215078 D 398579 CDS YP_001501672.1 157961638 5662209 2216549..2218339 1 NC_009901.1 SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: sfr:Sfri_1512 serine/threonine protein kinase; serine/threonine protein kinase 2218339 5662209 Spea_1814 Shewanella pealeana ATCC 700345 serine/threonine protein kinase YP_001501672.1 2216549 D 398579 CDS YP_001501673.1 157961639 5662210 2218439..2219581 1 NC_009901.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sbl:Sbal_1794 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2219581 5662210 Spea_1815 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501673.1 2218439 D 398579 CDS YP_001501674.1 157961640 5662211 2219874..2220425 1 NC_009901.1 PFAM: Curlin associated repeat protein; KEGG: slo:Shew_1725 curlin associated repeat protein; curlin-associated protein 2220425 5662211 Spea_1816 Shewanella pealeana ATCC 700345 curlin-associated protein YP_001501674.1 2219874 D 398579 CDS YP_001501675.1 157961641 5662212 2220539..2221174 1 NC_009901.1 PFAM: regulatory protein LuxR; KEGG: slo:Shew_1726 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 2221174 5662212 Spea_1817 Shewanella pealeana ATCC 700345 LuxR family transcriptional regulator YP_001501675.1 2220539 D 398579 CDS YP_001501676.1 157961642 5662213 2221171..2221632 1 NC_009901.1 KEGG: slo:Shew_1727 hypothetical protein; hypothetical protein 2221632 5662213 Spea_1818 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501676.1 2221171 D 398579 CDS YP_001501677.1 157961643 5662214 2221645..2222052 1 NC_009901.1 KEGG: slo:Shew_1728 curli production assembly/transport component CsgF precursor; curli production assembly/transport component CsgF 2222052 5662214 Spea_1819 Shewanella pealeana ATCC 700345 curli production assembly/transport component CsgF YP_001501677.1 2221645 D 398579 CDS YP_001501678.1 157961644 5662215 2222055..2222903 1 NC_009901.1 PFAM: Curli production assembly/transport component CsgG; KEGG: slo:Shew_1729 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 2222903 5662215 Spea_1820 Shewanella pealeana ATCC 700345 curli production assembly/transport component CsgG YP_001501678.1 2222055 D 398579 CDS YP_001501679.1 157961645 5662216 2223106..2223444 1 NC_009901.1 hypothetical protein 2223444 5662216 Spea_1821 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501679.1 2223106 D 398579 CDS YP_001501680.1 157961646 5662217 2223553..2223906 1 NC_009901.1 hypothetical protein 2223906 5662217 Spea_1822 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501680.1 2223553 D 398579 CDS YP_001501681.1 157961647 5662218 complement(2223974..2224387) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: tfu:Tfu_2816 hypothetical protein; TetR family transcriptional regulator 2224387 5662218 Spea_1823 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001501681.1 2223974 R 398579 CDS YP_001501682.1 157961648 5662219 2224584..2224940 1 NC_009901.1 PFAM: histidine triad (HIT) protein; KEGG: shn:Shewana3_2507 histidine triad (HIT) protein; histidine triad (HIT) protein 2224940 5662219 Spea_1824 Shewanella pealeana ATCC 700345 histidine triad (HIT) protein YP_001501682.1 2224584 D 398579 CDS YP_001501683.1 157961649 5662220 2224937..2225443 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: sbm:Shew185_1791 thioesterase superfamily protein; thioesterase superfamily protein 2225443 5662220 Spea_1825 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001501683.1 2224937 D 398579 CDS YP_001501684.1 157961650 5662221 2225430..2225936 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: shn:Shewana3_2505 thioesterase superfamily protein; thioesterase superfamily protein 2225936 5662221 Spea_1826 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001501684.1 2225430 D 398579 CDS YP_001501685.1 157961651 5662222 2225993..2226382 1 NC_009901.1 PFAM: protein of unknown function DUF1425; KEGG: slo:Shew_1734 protein of unknown function DUF1425; hypothetical protein 2226382 5662222 Spea_1827 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501685.1 2225993 D 398579 CDS YP_001501686.1 157961652 5662223 2226691..2228829 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_1735 TonB-dependent receptor; TonB-dependent receptor 2228829 5662223 Spea_1828 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001501686.1 2226691 D 398579 CDS YP_001501687.1 157961653 5662224 2228890..2229150 1 NC_009901.1 KEGG: sfr:Sfri_1527 hypothetical protein; hypothetical protein 2229150 5662224 Spea_1829 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501687.1 2228890 D 398579 CDS YP_001501688.1 157961654 5662225 2229271..2229933 1 NC_009901.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: sbl:Sbal_1804 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 2229933 5662225 Spea_1830 Shewanella pealeana ATCC 700345 nicotinamide mononucleotide transporter PnuC YP_001501688.1 2229271 D 398579 CDS YP_001501689.1 157961655 5662226 2229934..2230995 1 NC_009901.1 PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: slo:Shew_1738 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 2230995 5662226 Spea_1831 Shewanella pealeana ATCC 700345 aminoglycoside phosphotransferase YP_001501689.1 2229934 D 398579 CDS YP_001501690.1 157961656 5662227 2231316..2231909 1 NC_009901.1 PFAM: DoxX family protein; KEGG: shn:Shewana3_2495 DoxX family protein; DoxX family protein 2231909 5662227 Spea_1832 Shewanella pealeana ATCC 700345 DoxX family protein YP_001501690.1 2231316 D 398579 CDS YP_001501691.1 157961657 5662228 2232132..2232680 1 NC_009901.1 PFAM: nitroreductase; KEGG: spc:Sputcn32_1665 nitroreductase; nitroreductase 2232680 5662228 Spea_1833 Shewanella pealeana ATCC 700345 nitroreductase YP_001501691.1 2232132 D 398579 CDS YP_001501692.1 157961658 5662229 2232804..2233403 1 NC_009901.1 KEGG: slo:Shew_1744 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2233403 5662229 Spea_1834 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001501692.1 2232804 D 398579 CDS YP_001501693.1 157961659 5662230 2233617..2234021 1 NC_009901.1 KEGG: sbl:Sbal_1813 hypothetical protein; hypothetical protein 2234021 5662230 Spea_1835 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501693.1 2233617 D 398579 CDS YP_001501694.1 157961660 5662231 2234294..2234683 1 NC_009901.1 KEGG: slo:Shew_1747 hypothetical protein; hypothetical protein 2234683 5662231 Spea_1836 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501694.1 2234294 D 398579 CDS YP_001501695.1 157961661 5662232 2235133..2235819 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saz:Sama_1468 putative macrolide efflux ABC transporter, ATP-binding protein; ABC transporter-like protein 2235819 5662232 Spea_1837 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001501695.1 2235133 D 398579 CDS YP_001501696.1 157961662 5662233 2235809..2236900 1 NC_009901.1 KEGG: saz:Sama_1469 multidrug resistance efflux pump-like protein; multidrug resistance efflux pump-like protein 2236900 5662233 Spea_1838 Shewanella pealeana ATCC 700345 multidrug resistance efflux pump-like protein YP_001501696.1 2235809 D 398579 CDS YP_001501697.1 157961663 5662234 2236897..2238063 1 NC_009901.1 KEGG: saz:Sama_1470 membrane-fusion protein; membrane-fusion protein 2238063 5662234 Spea_1839 Shewanella pealeana ATCC 700345 membrane-fusion protein YP_001501697.1 2236897 D 398579 CDS YP_001501698.1 157961664 5662235 2238060..2239349 1 NC_009901.1 KEGG: saz:Sama_1471 membrane-fusion protein; membrane-fusion protein 2239349 5662235 Spea_1840 Shewanella pealeana ATCC 700345 membrane-fusion protein YP_001501698.1 2238060 D 398579 CDS YP_001501699.1 157961665 5662236 2239346..2240659 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: saz:Sama_1472 ABC transporter permease protein; hypothetical protein 2240659 5662236 Spea_1841 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501699.1 2239346 D 398579 CDS YP_001501700.1 157961666 5662237 2240933..2241559 1 NC_009901.1 PFAM: Ion transport 2 domain protein; KEGG: ppr:PBPRA1561 hypothetical protein; Ion transport 2 domain-containing protein 2241559 5662237 Spea_1842 Shewanella pealeana ATCC 700345 Ion transport 2 domain-containing protein YP_001501700.1 2240933 D 398579 CDS YP_001501701.1 157961667 5662238 2241570..2242721 1 NC_009901.1 PFAM: protein of unknown function UPF0118; KEGG: ppr:PBPRA1562 hypothetical protein; hypothetical protein 2242721 5662238 Spea_1843 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501701.1 2241570 D 398579 CDS YP_001501702.1 157961668 5662239 2243350..2244402 1 NC_009901.1 KEGG: spc:Sputcn32_1619 hypothetical protein; hypothetical protein 2244402 5662239 Spea_1844 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501702.1 2243350 D 398579 CDS YP_001501703.1 157961669 5662240 2244402..2245556 1 NC_009901.1 KEGG: sbm:Shew185_1809 hypothetical protein; hypothetical protein 2245556 5662240 Spea_1845 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501703.1 2244402 D 398579 CDS YP_001501704.1 157961670 5662241 2245546..2246046 1 NC_009901.1 KEGG: sbl:Sbal_1818 hypothetical protein; hypothetical protein 2246046 5662241 Spea_1846 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501704.1 2245546 D 398579 CDS YP_001501705.1 157961671 5662242 complement(2246629..2246949) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_2168 uncharacterized conserved protein UCP025560; hypothetical protein 2246949 5662242 Spea_1847 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501705.1 2246629 R 398579 CDS YP_001501706.1 157961672 5662243 complement(2246974..2247174) 1 NC_009901.1 KEGG: shn:Shewana3_1844 hypothetical protein; hypothetical protein 2247174 5662243 Spea_1848 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501706.1 2246974 R 398579 CDS YP_001501707.1 157961673 5662244 complement(2247286..2250600) 1 NC_009901.1 KEGG: sbl:Sbal_2434 hypothetical protein; hypothetical protein 2250600 5662244 Spea_1849 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501707.1 2247286 R 398579 CDS YP_001501708.1 157961674 5662245 complement(2250740..2251738) 1 NC_009901.1 KEGG: sco:SCO7159 integral membrane protein; hypothetical protein 2251738 5662245 Spea_1850 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501708.1 2250740 R 398579 CDS YP_001501709.1 157961675 5662246 complement(2252105..2252950) 1 NC_009901.1 PFAM: Aldose 1-epimerase; KEGG: sbm:Shew185_1722 aldose 1-epimerase; aldose 1-epimerase 2252950 5662246 Spea_1851 Shewanella pealeana ATCC 700345 aldose 1-epimerase YP_001501709.1 2252105 R 398579 CDS YP_001501710.1 157961676 5662247 2253169..2254959 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sfr:Sfri_2744 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2254959 5662247 Spea_1852 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001501710.1 2253169 D 398579 CDS YP_001501711.1 157961677 5662248 2255283..2255975 1 NC_009901.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase 2255975 5662248 Spea_1853 Shewanella pealeana ATCC 700345 nucleotidase YP_001501711.1 2255283 D 398579 CDS YP_001501712.1 157961678 5662249 complement(2256000..2256611) 1 NC_009901.1 PFAM: protein of unknown function DUF938; Methyltransferase type 12; KEGG: slo:Shew_2163 protein of unknown function DUF938; hypothetical protein 2256611 5662249 Spea_1854 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501712.1 2256000 R 398579 CDS YP_001501713.1 157961679 5662250 2256743..2257108 1 NC_009901.1 KEGG: pin:Ping_2410 hypothetical protein; hypothetical protein 2257108 5662250 Spea_1855 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501713.1 2256743 D 398579 CDS YP_001501714.1 157961680 5662251 2257188..2257484 1 NC_009901.1 KEGG: mmw:Mmwyl1_1485 putative transcriptional regulator, Fis family protein; putative Fis family transcriptional regulator 2257484 5662251 Spea_1856 Shewanella pealeana ATCC 700345 putative Fis family transcriptional regulator YP_001501714.1 2257188 D 398579 CDS YP_001501715.1 157961681 5662252 complement(2257913..2260102) 1 NC_009901.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: slo:Shew_2161 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 2260102 5662252 Spea_1857 Shewanella pealeana ATCC 700345 peptidyl-dipeptidase Dcp YP_001501715.1 2257913 R 398579 CDS YP_001501716.1 157961682 5662253 complement(2260562..2262001) 1 NC_009901.1 KEGG: ppr:PBPRB1968 hypothetical protein; hypothetical protein 2262001 5662253 Spea_1858 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501716.1 2260562 R 398579 CDS YP_001501717.1 157961683 5662254 2263272..2263901 1 NC_009901.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 2263901 5662254 Spea_1859 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001501717.1 2263272 D 398579 CDS YP_001501718.1 157961684 5662255 2264244..2265818 1 NC_009901.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: slo:Shew_2159 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 2265818 5662255 Spea_1860 Shewanella pealeana ATCC 700345 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001501718.1 2264244 D 398579 CDS YP_001501719.1 157961685 5662256 complement(2266076..2267017) 1 NC_009901.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: slo:Shew_3322 RarD protein, DMT superfamily transporter; transporter DMT superfamily protein 2267017 5662256 Spea_1861 Shewanella pealeana ATCC 700345 transporter DMT superfamily protein YP_001501719.1 2266076 R 398579 CDS YP_001501720.1 157961686 5662257 2268123..2270522 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: swi:Swit_3314 TonB-dependent receptor; TonB-dependent receptor plug 2270522 5662257 Spea_1862 Shewanella pealeana ATCC 700345 TonB-dependent receptor plug YP_001501720.1 2268123 D 398579 CDS YP_001501721.1 157961687 5662258 complement(2270984..2271952) 1 NC_009901.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1 2271952 rihA 5662258 rihA Shewanella pealeana ATCC 700345 ribonucleoside hydrolase 1 YP_001501721.1 2270984 R 398579 CDS YP_001501722.1 157961688 5662259 complement(2272206..2274005) 1 NC_009901.1 KEGG: sbm:Shew185_2658 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 2274005 5662259 Spea_1864 Shewanella pealeana ATCC 700345 gamma-glutamyltransferase YP_001501722.1 2272206 R 398579 CDS YP_001501723.1 157961689 5662260 2274200..2275420 1 NC_009901.1 PFAM: protein of unknown function DUF482; KEGG: sfr:Sfri_2329 protein of unknown function DUF482; hypothetical protein 2275420 5662260 Spea_1865 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501723.1 2274200 D 398579 CDS YP_001501724.1 157961690 5662261 complement(2275491..2275817) 1 NC_009901.1 hypothetical protein 2275817 5662261 Spea_1866 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501724.1 2275491 R 398579 CDS YP_001501725.1 157961691 5662262 complement(2275913..2276248) 1 NC_009901.1 hypothetical protein 2276248 5662262 Spea_1867 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501725.1 2275913 R 398579 CDS YP_001501726.1 157961692 5662263 complement(2276507..2276884) 1 NC_009901.1 KEGG: saz:Sama_2872 hypothetical protein; hypothetical protein 2276884 5662263 Spea_1868 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501726.1 2276507 R 398579 CDS YP_001501727.1 157961693 5662264 complement(2276940..2277560) 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbl:Sbal_2618 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 2277560 5662264 Spea_1869 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001501727.1 2276940 R 398579 CDS YP_001501728.1 157961694 5662265 2278702..2279517 1 NC_009901.1 KEGG: spc:Sputcn32_0179 hypothetical protein; hypothetical protein 2279517 5662265 Spea_1870 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501728.1 2278702 D 398579 CDS YP_001501729.1 157961695 5662266 2279689..2281341 1 NC_009901.1 PFAM: protein of unknown function DUF87; KEGG: mca:MCA1687 hypothetical protein; hypothetical protein 2281341 5662266 Spea_1871 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501729.1 2279689 D 398579 CDS YP_001501730.1 157961696 5662267 2281416..2283173 1 NC_009901.1 KEGG: sbm:Shew185_2659 ATP-dependent endonuclease of the OLD family; hypothetical protein 2283173 5662267 Spea_1872 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501730.1 2281416 D 398579 CDS YP_001501731.1 157961697 5662268 complement(2283981..2285021) 1 NC_009901.1 KEGG: shw:Sputw3181_2355 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 2285021 5662268 Spea_1873 Shewanella pealeana ATCC 700345 4-hydroxyphenylpyruvate dioxygenase YP_001501731.1 2283981 R 398579 CDS YP_001501732.1 157961698 5662269 complement(2285111..2286271) 1 NC_009901.1 PFAM: homogentisate 12-dioxygenase; KEGG: sfr:Sfri_2326 homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase 2286271 5662269 Spea_1874 Shewanella pealeana ATCC 700345 homogentisate 12-dioxygenase YP_001501732.1 2285111 R 398579 CDS YP_001501733.1 157961699 5662270 2286427..2287326 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_2153 transcriptional regulator, LysR family; LysR family transcriptional regulator 2287326 5662270 Spea_1875 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501733.1 2286427 D 398579 CDS YP_001501734.1 157961700 5662271 2287728..2288087 1 NC_009901.1 KEGG: slo:Shew_2151 hypothetical protein; hypothetical protein 2288087 5662271 Spea_1876 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501734.1 2287728 D 398579 CDS YP_001501735.1 157961701 5662272 complement(2288240..2289232) 1 NC_009901.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: shm:Shewmr7_2292 cytochrome-c peroxidase; cytochrome-c peroxidase 2289232 5662272 Spea_1877 Shewanella pealeana ATCC 700345 cytochrome-c peroxidase YP_001501735.1 2288240 R 398579 CDS YP_001501736.1 157961702 5662273 complement(2289486..2289716) 1 NC_009901.1 KEGG: slo:Shew_2150 integral membrane protein TerC; integral membrane protein TerC 2289716 5662273 Spea_1878 Shewanella pealeana ATCC 700345 integral membrane protein TerC YP_001501736.1 2289486 R 398579 CDS YP_001501737.1 157961703 5662274 2289976..2290767 1 NC_009901.1 KEGG: slo:Shew_2149 conserved hypothetical ABC transporter protein; ABC transporter 2290767 5662274 Spea_1879 Shewanella pealeana ATCC 700345 ABC transporter YP_001501737.1 2289976 D 398579 CDS YP_001501738.1 157961704 5662275 2290918..2291757 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: slo:Shew_3018 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2291757 5662275 Spea_1880 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001501738.1 2290918 D 398579 CDS YP_001501739.1 157961705 5662276 complement(2291767..2292174) 1 NC_009901.1 PFAM: protein of unknown function DUF307; KEGG: son:SO_1977 hypothetical protein; hypothetical protein 2292174 5662276 Spea_1881 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501739.1 2291767 R 398579 CDS YP_001501740.1 157961706 5662277 2292552..2293469 1 NC_009901.1 KEGG: son:SO_1978 hypothetical protein; hypothetical protein 2293469 5662277 Spea_1882 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501740.1 2292552 D 398579 CDS YP_001501741.1 157961707 5662278 2293491..2293634 1 NC_009901.1 KEGG: slo:Shew_2147 hypothetical protein; hypothetical protein 2293634 5662278 Spea_1883 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501741.1 2293491 D 398579 CDS YP_001501742.1 157961708 5662279 complement(2294204..2294377) 1 NC_009901.1 KEGG: shn:Shewana3_2467 hypothetical protein; hypothetical protein 2294377 5662279 Spea_1884 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501742.1 2294204 R 398579 CDS YP_001501743.1 157961709 5662280 2294882..2295772 1 NC_009901.1 KEGG: slo:Shew_2145 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2295772 5662280 Spea_1885 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001501743.1 2294882 D 398579 CDS YP_001501744.1 157961710 5662281 complement(2296140..2296709) 1 NC_009901.1 hypothetical protein 2296709 5662281 Spea_1886 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501744.1 2296140 R 398579 CDS YP_001501745.1 157961711 5662282 complement(2296792..2297622) 1 NC_009901.1 e14 prophage; cell death peptidase; inhibitor of T4 late gene expression; late inhibitor of T4; phage exclusion protein Lit 2297622 5662282 Spea_1887 Shewanella pealeana ATCC 700345 phage exclusion protein Lit YP_001501745.1 2296792 R 398579 CDS YP_001501746.1 157961712 5662283 complement(2297800..2298582) 1 NC_009901.1 KEGG: aba:Acid345_3545 hypothetical protein; hypothetical protein 2298582 5662283 Spea_1888 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501746.1 2297800 R 398579 CDS YP_001501747.1 157961713 5664740 complement(2298749..2299174) 1 NC_009901.1 hypothetical protein 2299174 5664740 Spea_1890 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501747.1 2298749 R 398579 CDS YP_001501748.1 157961714 5662285 complement(2299645..2299851) 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: sfr:Sfri_3420 transcriptional regulator, XRE family protein; XRE family transcriptional regulator 2299851 5662285 Spea_1891 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001501748.1 2299645 R 398579 CDS YP_001501749.1 157961715 5662286 2299980..2300519 1 NC_009901.1 KEGG: sbm:Shew185_4272 hypothetical protein; hypothetical protein 2300519 5662286 Spea_1892 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501749.1 2299980 D 398579 CDS YP_001501750.1 157961716 5662287 2300525..2301943 1 NC_009901.1 PFAM: helicase domain protein; type III restriction protein res subunit; KEGG: sbm:Shew185_4273 type III restriction protein res subunit; type III restriction protein res subunit 2301943 5662287 Spea_1893 Shewanella pealeana ATCC 700345 type III restriction protein res subunit YP_001501750.1 2300525 D 398579 CDS YP_001501751.1 157961717 5662288 complement(2302098..2302910) 1 NC_009901.1 KEGG: shn:Shewana3_1253 hypothetical protein; hypothetical protein 2302910 5662288 Spea_1894 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501751.1 2302098 R 398579 CDS YP_001501752.1 157961718 5662289 complement(2303250..2303528) 1 NC_009901.1 hypothetical protein 2303528 5662289 Spea_1895 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501752.1 2303250 R 398579 CDS YP_001501753.1 157961719 5662290 complement(2304868..2305251) 1 NC_009901.1 hypothetical protein 2305251 5662290 Spea_1896 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501753.1 2304868 R 398579 CDS YP_001501754.1 157961720 5662291 complement(2305253..2307295) 1 NC_009901.1 PFAM: integrase family protein; KEGG: vch:VC0183 hypothetical protein; integrase family protein 2307295 5662291 Spea_1897 Shewanella pealeana ATCC 700345 integrase family protein YP_001501754.1 2305253 R 398579 CDS YP_001501755.1 157961721 5662292 complement(2307295..2309985) 1 NC_009901.1 hypothetical protein 2309985 5662292 Spea_1898 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501755.1 2307295 R 398579 CDS YP_001501756.1 157961722 5662293 complement(2309986..2311365) 1 NC_009901.1 PFAM: integrase family protein; KEGG: spc:Sputcn32_0163 hypothetical protein; integrase family protein 2311365 5662293 Spea_1899 Shewanella pealeana ATCC 700345 integrase family protein YP_001501756.1 2309986 R 398579 CDS YP_001501757.1 157961723 5662294 2311491..2312213 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: saz:Sama_1578 small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 2312213 5662294 Spea_1900 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001501757.1 2311491 D 398579 CDS YP_001501758.1 157961724 5662295 2312303..2313247 1 NC_009901.1 PFAM: response regulator receiver; CheW domain protein; KEGG: shn:Shewana3_2462 response regulator receiver modulated CheW protein; response regulator receiver modulated CheW protein 2313247 5662295 Spea_1901 Shewanella pealeana ATCC 700345 response regulator receiver modulated CheW protein YP_001501758.1 2312303 D 398579 CDS YP_001501759.1 157961725 5662296 complement(2313309..2313953) 1 NC_009901.1 KEGG: sbl:Sbal_2593 hypothetical protein; hypothetical protein 2313953 5662296 Spea_1902 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501759.1 2313309 R 398579 CDS YP_001501760.1 157961726 5662297 complement(2314040..2314399) 1 NC_009901.1 KEGG: sdn:Sden_2142 hypothetical protein; hypothetical protein 2314399 5662297 Spea_1903 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501760.1 2314040 R 398579 CDS YP_001501761.1 157961727 5662298 2314764..2315954 1 NC_009901.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: she:Shewmr4_2269 lytic murein transglycosylase; lytic murein transglycosylase 2315954 5662298 Spea_1904 Shewanella pealeana ATCC 700345 lytic murein transglycosylase YP_001501761.1 2314764 D 398579 CDS YP_001501762.1 157961728 5662299 2316083..2316565 1 NC_009901.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_2139 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 2316565 5662299 Spea_1905 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001501762.1 2316083 D 398579 CDS YP_001501763.1 157961729 5662300 2316639..2316857 1 NC_009901.1 KEGG: slo:Shew_2138 hypothetical protein; hypothetical protein 2316857 5662300 Spea_1906 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501763.1 2316639 D 398579 CDS YP_001501764.1 157961730 5662301 2316970..2317650 1 NC_009901.1 PFAM: phospholipase/Carboxylesterase; KEGG: sdn:Sden_2138 carboxylesterase; carboxylesterase 2317650 5662301 Spea_1907 Shewanella pealeana ATCC 700345 carboxylesterase YP_001501764.1 2316970 D 398579 CDS YP_001501765.1 157961731 5662302 2318021..2319739 1 NC_009901.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 2319739 ushA 5662302 ushA Shewanella pealeana ATCC 700345 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_001501765.1 2318021 D 398579 CDS YP_001501766.1 157961732 5662303 2320035..2320475 1 NC_009901.1 PFAM: heat shock protein Hsp20; KEGG: slo:Shew_2134 heat shock protein HSP20; heat shock protein Hsp20 2320475 5662303 Spea_1909 Shewanella pealeana ATCC 700345 heat shock protein Hsp20 YP_001501766.1 2320035 D 398579 CDS YP_001501767.1 157961733 5662304 complement(2320555..2321049) 1 NC_009901.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: sdn:Sden_2123 acetolactate synthase, small subunit; acetolactate synthase small subunit 2321049 5662304 Spea_1910 Shewanella pealeana ATCC 700345 acetolactate synthase small subunit YP_001501767.1 2320555 R 398579 CDS YP_001501768.1 157961734 5662305 complement(2321049..2322770) 1 NC_009901.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: slo:Shew_1776 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 2322770 5662305 Spea_1911 Shewanella pealeana ATCC 700345 acetolactate synthase large subunit YP_001501768.1 2321049 R 398579 CDS YP_001501769.1 157961735 5662306 complement(2323131..2324357) 1 NC_009901.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_1777 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 2324357 5662306 Spea_1912 Shewanella pealeana ATCC 700345 Bcr/CflA subfamily drug resistance transporter YP_001501769.1 2323131 R 398579 CDS YP_001501770.1 157961736 5662307 complement(2325153..2325497) 1 NC_009901.1 KEGG: slo:Shew_1571 hypothetical protein; hypothetical protein 2325497 5662307 Spea_1913 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501770.1 2325153 R 398579 CDS YP_001501771.1 157961737 5662308 2325746..2326498 1 NC_009901.1 PFAM: protein of unknown function DUF34; KEGG: shw:Sputw3181_1787 protein of unknown function DUF34; hypothetical protein 2326498 5662308 Spea_1914 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501771.1 2325746 D 398579 CDS YP_001501772.1 157961738 5662309 2326597..2326995 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 2326995 5662309 Spea_1915 Shewanella pealeana ATCC 700345 transposase YP_001501772.1 2326597 D 398579 CDS YP_001501773.1 157961739 5662310 2327079..2327831 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 2327831 5662310 Spea_1916 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001501773.1 2327079 D 398579 CDS YP_001501774.1 157961740 5662311 complement(2327899..2329938) 1 NC_009901.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2329938 metG 5662311 metG Shewanella pealeana ATCC 700345 methionyl-tRNA synthetase YP_001501774.1 2327899 R 398579 CDS YP_001501775.1 157961741 5662312 2330099..2331214 1 NC_009901.1 KEGG: slo:Shew_1574 ATP-binding protein, Mrp/Nbp35 family; ATP-binding Mrp/Nbp35 family protein 2331214 5662312 Spea_1918 Shewanella pealeana ATCC 700345 ATP-binding Mrp/Nbp35 family protein YP_001501775.1 2330099 D 398579 CDS YP_001501776.1 157961742 5662313 2331226..2331861 1 NC_009901.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 2331861 5662313 Spea_1919 Shewanella pealeana ATCC 700345 uridine kinase YP_001501776.1 2331226 D 398579 CDS YP_001501777.1 157961743 5662314 2331896..2332117 1 NC_009901.1 KEGG: sbm:Shew185_2455 deoxycytidine triphosphate deaminase; deoxycytidine triphosphate deaminase 2332117 5662314 Spea_1920 Shewanella pealeana ATCC 700345 deoxycytidine triphosphate deaminase YP_001501777.1 2331896 D 398579 CDS YP_001501778.1 157961744 5662315 2332117..2333019 1 NC_009901.1 PFAM: aminotransferase class IV; KEGG: shw:Sputw3181_1793 aminotransferase, class IV; aminodeoxychorismate lyase 2333019 5662315 Spea_1921 Shewanella pealeana ATCC 700345 aminodeoxychorismate lyase YP_001501778.1 2332117 D 398579 CDS YP_001501779.1 157961745 5662316 2333016..2334023 1 NC_009901.1 PFAM: aminodeoxychorismate lyase; KEGG: slo:Shew_1578 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2334023 5662316 Spea_1922 Shewanella pealeana ATCC 700345 aminodeoxychorismate lyase YP_001501779.1 2333016 D 398579 CDS YP_001501780.1 157961746 5662317 2334020..2334664 1 NC_009901.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2334664 tmk 5662317 tmk Shewanella pealeana ATCC 700345 thymidylate kinase YP_001501780.1 2334020 D 398579 CDS YP_001501781.1 157961747 5662318 2334666..2335583 1 NC_009901.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: slo:Shew_1580 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 2335583 5662318 Spea_1924 Shewanella pealeana ATCC 700345 DNA polymerase III subunit delta' YP_001501781.1 2334666 D 398579 CDS YP_001501782.1 157961748 5662319 2335590..2335916 1 NC_009901.1 KEGG: shw:Sputw3181_1797 type IV pilus biogenesis protein PilZ; type IV pilus biogenesis protein PilZ 2335916 5662319 Spea_1925 Shewanella pealeana ATCC 700345 type IV pilus biogenesis protein PilZ YP_001501782.1 2335590 D 398579 CDS YP_001501783.1 157961749 5662320 2335962..2336750 1 NC_009901.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: shn:Shewana3_1769 hydrolase, TatD family; TatD family hydrolase 2336750 5662320 Spea_1926 Shewanella pealeana ATCC 700345 TatD family hydrolase YP_001501783.1 2335962 D 398579 CDS YP_001501784.1 157961750 5662321 complement(2336976..2338442) 1 NC_009901.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2338442 yebU 5662321 yebU Shewanella pealeana ATCC 700345 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_001501784.1 2336976 R 398579 CDS YP_001501785.1 157961751 5662322 2338532..2339758 1 NC_009901.1 PFAM: nucleoside recognition domain protein; KEGG: slo:Shew_1584 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 2339758 5662322 Spea_1928 Shewanella pealeana ATCC 700345 nucleoside recognition domain-containing protein YP_001501785.1 2338532 D 398579 CDS YP_001501786.1 157961752 5662323 complement(2339909..2342539) 1 NC_009901.1 PFAM: Mammalian cell entry related domain protein; KEGG: she:Shewmr4_1667 mammalian cell entry related domain protein; hypothetical protein 2342539 5662323 Spea_1929 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501786.1 2339909 R 398579 CDS YP_001501787.1 157961753 5662324 complement(2342517..2343158) 1 NC_009901.1 PFAM: Paraquat-inducible protein A; KEGG: shw:Sputw3181_1802 paraquat-inducible protein A; paraquat-inducible protein A 2343158 5662324 Spea_1930 Shewanella pealeana ATCC 700345 paraquat-inducible protein A YP_001501787.1 2342517 R 398579 CDS YP_001501788.1 157961754 5662325 complement(2343148..2343777) 1 NC_009901.1 PFAM: Paraquat-inducible protein A; KEGG: shm:Shewmr7_1744 paraquat-inducible protein A; paraquat-inducible protein A 2343777 5662325 Spea_1931 Shewanella pealeana ATCC 700345 paraquat-inducible protein A YP_001501788.1 2343148 R 398579 CDS YP_001501789.1 157961755 5662326 2343962..2344252 1 NC_009901.1 PFAM: YebG family protein; KEGG: slo:Shew_1799 YebG family protein; hypothetical protein 2344252 5662326 Spea_1932 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501789.1 2343962 D 398579 CDS YP_001501790.1 157961756 5662327 2344337..2344795 1 NC_009901.1 PFAM: GAF domain protein; KEGG: shw:Sputw3181_1805 putative GAF sensor protein; putative GAF sensor protein 2344795 5662327 Spea_1933 Shewanella pealeana ATCC 700345 putative GAF sensor protein YP_001501790.1 2344337 D 398579 CDS YP_001501791.1 157961757 5662328 2345083..2345721 1 NC_009901.1 affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 2345721 5662328 Spea_1934 Shewanella pealeana ATCC 700345 putative solute/DNA competence effector YP_001501791.1 2345083 D 398579 CDS YP_001501792.1 157961758 5662329 2345755..2347800 1 NC_009901.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2347800 5662329 Spea_1935 Shewanella pealeana ATCC 700345 carboxy-terminal protease YP_001501792.1 2345755 D 398579 CDS YP_001501793.1 157961759 5662330 2347873..2350434 1 NC_009901.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: slo:Shew_1803 aminopeptidase N; aminopeptidase N 2350434 pepN 5662330 pepN Shewanella pealeana ATCC 700345 aminopeptidase N YP_001501793.1 2347873 D 398579 CDS YP_001501794.1 157961760 5662331 2350522..2350752 1 NC_009901.1 KEGG: slo:Shew_1804 hypothetical protein; hypothetical protein 2350752 5662331 Spea_1937 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501794.1 2350522 D 398579 CDS YP_001501795.1 157961761 5662332 2351070..2353118 1 NC_009901.1 PFAM: protein of unknown function DUF1302; KEGG: slo:Shew_1805 protein of unknown function DUF1302; hypothetical protein 2353118 5662332 Spea_1938 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501795.1 2351070 D 398579 CDS YP_001501796.1 157961762 5662333 2353138..2354502 1 NC_009901.1 PFAM: protein of unknown function DUF1329; KEGG: slo:Shew_1806 protein of unknown function DUF1329; hypothetical protein 2354502 5662333 Spea_1939 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501796.1 2353138 D 398579 CDS YP_001501797.1 157961763 5662334 2354556..2355572 1 NC_009901.1 KEGG: sfr:Sfri_2223 BNR repeat protein; BNR repeat-containing protein 2355572 5662334 Spea_1940 Shewanella pealeana ATCC 700345 BNR repeat-containing protein YP_001501797.1 2354556 D 398579 CDS YP_001501798.1 157961764 5662335 2355585..2357888 1 NC_009901.1 PFAM: Patched family protein; KEGG: slo:Shew_1808 hypothetical protein; hypothetical protein 2357888 5662335 Spea_1941 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501798.1 2355585 D 398579 CDS YP_001501799.1 157961765 5662336 2358150..2362994 1 NC_009901.1 PFAM: NAD-glutamate dehydrogenase; KEGG: slo:Shew_1809 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 2362994 5662336 Spea_1942 Shewanella pealeana ATCC 700345 NAD-glutamate dehydrogenase YP_001501799.1 2358150 D 398579 CDS YP_001501800.1 157961766 5662337 2363054..2364073 1 NC_009901.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2364073 5662337 Spea_1943 Shewanella pealeana ATCC 700345 dihydroorotate dehydrogenase 2 YP_001501800.1 2363054 D 398579 CDS YP_001501801.1 157961767 5662338 2364247..2364786 1 NC_009901.1 PFAM: protein of unknown function DUF1379; KEGG: slo:Shew_1811 protein of unknown function DUF1379; hypothetical protein 2364786 5662338 Spea_1944 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501801.1 2364247 D 398579 CDS YP_001501802.1 157961768 5662339 complement(2365103..2365708) 1 NC_009901.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: shm:Shewmr7_2838 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2365708 5662339 Spea_1945 Shewanella pealeana ATCC 700345 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001501802.1 2365103 R 398579 CDS YP_001501803.1 157961769 5664744 2366975..2369110 1 NC_009901.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 2369110 rlmL 5664744 rlmL Shewanella pealeana ATCC 700345 23S rRNA m(2)G2445 methyltransferase YP_001501803.1 2366975 D 398579 CDS YP_001501804.1 157961770 5662341 2369100..2369336 1 NC_009901.1 PFAM: glutaredoxin 2; KEGG: son:SO_1852 hypothetical protein; glutaredoxin 2369336 5662341 Spea_1947 Shewanella pealeana ATCC 700345 glutaredoxin YP_001501804.1 2369100 D 398579 CDS YP_001501805.1 157961771 5662342 2369338..2371275 1 NC_009901.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 2371275 5662342 Spea_1948 Shewanella pealeana ATCC 700345 ABC transporter ATPase YP_001501805.1 2369338 D 398579 CDS YP_001501806.1 157961772 5662343 2371305..2373161 1 NC_009901.1 KEGG: shn:Shewana3_1604 hypothetical protein; hypothetical protein 2373161 5662343 Spea_1949 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501806.1 2371305 D 398579 CDS YP_001501807.1 157961773 5662344 2373357..2373533 1 NC_009901.1 PFAM: ribosome modulation factor; KEGG: slo:Shew_1816 ribosome modulation factor; ribosome modulation factor 2373533 5662344 Spea_1950 Shewanella pealeana ATCC 700345 ribosome modulation factor YP_001501807.1 2373357 D 398579 CDS YP_001501808.1 157961774 5662345 complement(2373668..2374183) 1 NC_009901.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 2374183 5662345 Spea_1951 Shewanella pealeana ATCC 700345 3-hydroxydecanoyl-ACP dehydratase YP_001501808.1 2373668 R 398579 CDS YP_001501809.1 157961775 5662346 complement(2374251..2375963) 1 NC_009901.1 PFAM: peptidase S16 lon domain protein; KEGG: son:SO_1857 hypothetical ATP-dependent protease; peptidase S16 lon domain-containing protein 2375963 5662346 Spea_1952 Shewanella pealeana ATCC 700345 peptidase S16 lon domain-containing protein YP_001501809.1 2374251 R 398579 CDS YP_001501810.1 157961776 5664745 2376525..2377169 1 NC_009901.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 2377169 5664745 Spea_1953 Shewanella pealeana ATCC 700345 response regulator YP_001501810.1 2376525 D 398579 CDS YP_001501811.1 157961777 5662348 2377189..2379018 1 NC_009901.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2379018 uvrC 5662348 uvrC Shewanella pealeana ATCC 700345 excinuclease ABC subunit C YP_001501811.1 2377189 D 398579 CDS YP_001501812.1 157961778 5662349 2379066..2379614 1 NC_009901.1 KEGG: slo:Shew_1826 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2379614 5662349 Spea_1955 Shewanella pealeana ATCC 700345 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001501812.1 2379066 D 398579 CDS YP_001501813.1 157961779 5664748 2380631..2381200 1 NC_009901.1 KEGG: son:SO_4159 hypothetical protein; hypothetical protein 2381200 5664748 Spea_1956 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501813.1 2380631 D 398579 CDS YP_001501814.1 157961780 5662351 2381364..2382719 1 NC_009901.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: slo:Shew_1828 peptidoglycan-binding domain 1 protein; peptidoglycan-binding domain-containing protein 2382719 5662351 Spea_1957 Shewanella pealeana ATCC 700345 peptidoglycan-binding domain-containing protein YP_001501814.1 2381364 D 398579 CDS YP_001501815.1 157961781 5662352 2382849..2383397 1 NC_009901.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: shw:Sputw3181_2115 protein of unknown function DUF882; hypothetical protein 2383397 5662352 Spea_1958 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501815.1 2382849 D 398579 CDS YP_001501816.1 157961782 5662353 2383547..2383834 1 NC_009901.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 2383834 5662353 Spea_1959 Shewanella pealeana ATCC 700345 50S ribosomal protein L25 YP_001501816.1 2383547 D 398579 CDS YP_001501817.1 157961783 5662354 complement(2383910..2385424) 1 NC_009901.1 PFAM: SpoVR family protein; KEGG: slo:Shew_1831 SpoVR family protein; SpoVR family protein 2385424 5662354 Spea_1960 Shewanella pealeana ATCC 700345 SpoVR family protein YP_001501817.1 2383910 R 398579 CDS YP_001501818.1 157961784 5662355 complement(2385434..2386702) 1 NC_009901.1 PFAM: protein of unknown function DUF444; KEGG: slo:Shew_1832 protein of unknown function DUF444; hypothetical protein 2386702 5662355 Spea_1961 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501818.1 2385434 R 398579 CDS YP_001501819.1 157961785 5662356 complement(2386754..2388688) 1 NC_009901.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: slo:Shew_1833 putative serine protein kinase, PrkA; putative serine protein kinase PrkA 2388688 5662356 Spea_1962 Shewanella pealeana ATCC 700345 putative serine protein kinase PrkA YP_001501819.1 2386754 R 398579 CDS YP_001501820.1 157961786 5662357 complement(2388916..2389500) 1 NC_009901.1 PFAM: manganese and iron superoxide dismutase; KEGG: spc:Sputcn32_1687 superoxide dismutase; superoxide dismutase 2389500 5662357 Spea_1963 Shewanella pealeana ATCC 700345 superoxide dismutase YP_001501820.1 2388916 R 398579 CDS YP_001501821.1 157961787 5662358 2389726..2390067 1 NC_009901.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: slo:Shew_1835 glutaredoxin-like protein; glutaredoxin-like protein 2390067 5662358 Spea_1964 Shewanella pealeana ATCC 700345 glutaredoxin-like protein YP_001501821.1 2389726 D 398579 CDS YP_001501822.1 157961788 5662359 complement(2390178..2391434) 1 NC_009901.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: slo:Shew_1836 uracil-xanthine permease; uracil-xanthine permease 2391434 5662359 Spea_1965 Shewanella pealeana ATCC 700345 uracil-xanthine permease YP_001501822.1 2390178 R 398579 CDS YP_001501823.1 157961789 5662360 2391611..2392723 1 NC_009901.1 KEGG: slo:Shew_1837 hypothetical protein; hypothetical protein 2392723 5662360 Spea_1966 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501823.1 2391611 D 398579 CDS YP_001501824.1 157961790 5662361 2392797..2393507 1 NC_009901.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 2393507 5662361 Spea_1967 Shewanella pealeana ATCC 700345 DNA replication initiation factor YP_001501824.1 2392797 D 398579 CDS YP_001501825.1 157961791 5662362 complement(2393609..2395546) 1 NC_009901.1 KEGG: sbl:Sbal_1787 hypothetical protein; hypothetical protein 2395546 5662362 Spea_1968 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501825.1 2393609 R 398579 CDS YP_001501826.1 157961792 5662363 complement(2395719..2396090) 1 NC_009901.1 KEGG: shm:Shewmr7_2421 hypothetical protein; hypothetical protein 2396090 5662363 Spea_1969 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501826.1 2395719 R 398579 CDS YP_001501827.1 157961793 5662364 complement(2396103..2396453) 1 NC_009901.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sbm:Shew185_1782 arsenate reductase; arsenate reductase 2396453 5662364 Spea_1970 Shewanella pealeana ATCC 700345 arsenate reductase YP_001501827.1 2396103 R 398579 CDS YP_001501828.1 157961794 5662365 complement(2396527..2397987) 1 NC_009901.1 PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: sbm:Shew185_1783 peptidase M48 Ste24p; peptidase M48 Ste24p 2397987 5662365 Spea_1971 Shewanella pealeana ATCC 700345 peptidase M48 Ste24p YP_001501828.1 2396527 R 398579 CDS YP_001501829.1 157961795 5662366 2398099..2398314 1 NC_009901.1 PFAM: SirA family protein; KEGG: sdn:Sden_1648 hypothetical protein; SirA family protein 2398314 5662366 Spea_1972 Shewanella pealeana ATCC 700345 SirA family protein YP_001501829.1 2398099 D 398579 CDS YP_001501830.1 157961796 5662367 2398405..2399514 1 NC_009901.1 PFAM: protein of unknown function UPF0118; KEGG: slo:Shew_1843 protein of unknown function UPF0118; hypothetical protein 2399514 5662367 Spea_1973 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501830.1 2398405 D 398579 CDS YP_001501831.1 157961797 5662368 complement(2400010..2400900) 1 NC_009901.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 2400900 5662368 Spea_1974 Shewanella pealeana ATCC 700345 chromosome replication initiation inhibitor protein YP_001501831.1 2400010 R 398579 CDS YP_001501832.1 157961798 5662369 2401029..2401643 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: slo:Shew_1845 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 2401643 5662369 Spea_1975 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001501832.1 2401029 D 398579 CDS YP_001501833.1 157961799 5662370 2401724..2402107 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 2402107 5662370 Spea_1976 Shewanella pealeana ATCC 700345 transposase YP_001501833.1 2401724 D 398579 CDS YP_001501834.1 157961800 5662371 2402224..2402952 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 2402952 5662371 Spea_1977 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001501834.1 2402224 D 398579 CDS YP_001501835.1 157961801 5662372 complement(2402985..2403455) 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO_1877 bacterioferritin comigratory protein; alkyl hydroperoxide reductase 2403455 5662372 Spea_1978 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001501835.1 2402985 R 398579 CDS YP_001501836.1 157961802 5662373 complement(2403476..2404012) 1 NC_009901.1 PFAM: amino acid-binding ACT domain protein; KEGG: slo:Shew_1847 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 2404012 5662373 Spea_1979 Shewanella pealeana ATCC 700345 amino acid-binding ACT domain-containing protein YP_001501836.1 2403476 R 398579 CDS YP_001501837.1 157961803 5662374 2404254..2405138 1 NC_009901.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2405138 5662374 Spea_1980 Shewanella pealeana ATCC 700345 dihydrodipicolinate synthase YP_001501837.1 2404254 D 398579 CDS YP_001501838.1 157961804 5662375 2405142..2406239 1 NC_009901.1 PFAM: NlpBDapX family lipoprotein; KEGG: slo:Shew_1849 NlpBDapX family lipoprotein; NlpB/DapX family lipoprotein 2406239 5662375 Spea_1981 Shewanella pealeana ATCC 700345 NlpB/DapX family lipoprotein YP_001501838.1 2405142 D 398579 CDS YP_001501839.1 157961805 5662376 2406610..2407692 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_1851 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2407692 5662376 Spea_1982 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001501839.1 2406610 D 398579 CDS YP_001501840.1 157961806 5662377 2407689..2410793 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: slo:Shew_1852 acriflavin resistance protein; acriflavin resistance protein 2410793 5662377 Spea_1983 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001501840.1 2407689 D 398579 CDS YP_001501841.1 157961807 5662378 complement(2410860..2411099) 1 NC_009901.1 KEGG: son:SO_2479 hypothetical protein; hypothetical protein 2411099 5662378 Spea_1984 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501841.1 2410860 R 398579 CDS YP_001501842.1 157961808 5662379 complement(2411113..2411850) 1 NC_009901.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2411850 5662379 Spea_1985 Shewanella pealeana ATCC 700345 3-deoxy-manno-octulosonate cytidylyltransferase YP_001501842.1 2411113 R 398579 CDS YP_001501843.1 157961809 5662381 complement(2412852..2413466) 1 NC_009901.1 PFAM: carbonic anhydrase; KEGG: slo:Shew_1859 carbonate dehydratase; carbonate dehydratase 2413466 5662381 Spea_1988 Shewanella pealeana ATCC 700345 carbonate dehydratase YP_001501843.1 2412852 R 398579 CDS YP_001501844.1 157961810 5662382 complement(2413711..2414565) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: shm:Shewmr7_2123 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2414565 5662382 Spea_1989 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001501844.1 2413711 R 398579 CDS YP_001501845.1 157961811 5662383 complement(2414614..2415192) 1 NC_009901.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: slo:Shew_1861 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 2415192 5662383 Spea_1990 Shewanella pealeana ATCC 700345 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_001501845.1 2414614 R 398579 CDS YP_001501846.1 157961812 5662384 complement(2415285..2416430) 1 NC_009901.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2416430 5662384 Spea_1991 Shewanella pealeana ATCC 700345 succinyl-diaminopimelate desuccinylase YP_001501846.1 2415285 R 398579 CDS YP_001501847.1 157961813 5662385 complement(2416427..2416807) 1 NC_009901.1 PFAM: arsenate reductase and related; KEGG: sfr:Sfri_1766 hypothetical protein; arsenate reductase-like protein 2416807 5662385 Spea_1992 Shewanella pealeana ATCC 700345 arsenate reductase-like protein YP_001501847.1 2416427 R 398579 CDS YP_001501848.1 157961814 5662386 complement(2416942..2417451) 1 NC_009901.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 2417451 5662386 Spea_1993 Shewanella pealeana ATCC 700345 PTS system glucose-specific transporter YP_001501848.1 2416942 R 398579 CDS YP_001501849.1 157961815 5662387 complement(2417516..2419219) 1 NC_009901.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: son:SO_2237 phosphotransferase system, enzyme I; phosphoenolpyruvate-protein phosphotransferase 2419219 5662387 Spea_1994 Shewanella pealeana ATCC 700345 phosphoenolpyruvate-protein phosphotransferase YP_001501849.1 2417516 R 398579 CDS YP_001501850.1 157961816 5662388 complement(2419230..2419502) 1 NC_009901.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: sbm:Shew185_2349 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 2419502 5662388 Spea_1995 Shewanella pealeana ATCC 700345 phosphotransferase system, phosphocarrier protein HPr YP_001501850.1 2419230 R 398579 CDS YP_001501851.1 157961817 5662389 complement(2419567..2419953) 1 NC_009901.1 KEGG: slo:Shew_1867 hypothetical protein; hypothetical protein 2419953 5662389 Spea_1996 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501851.1 2419567 R 398579 CDS YP_001501852.1 157961818 5662390 complement(2420055..2421695) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: slo:Shew_1868 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2421695 5662390 Spea_1997 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001501852.1 2420055 R 398579 CDS YP_001501853.1 157961819 5662391 2422060..2422764 1 NC_009901.1 KEGG: shn:Shewana3_2253 hypothetical protein; hypothetical protein 2422764 5662391 Spea_1998 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501853.1 2422060 D 398579 CDS YP_001501854.1 157961820 5662392 complement(2422912..2423559) 1 NC_009901.1 KEGG: ppr:PBPRB1229 putative DNA polymerase III; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2423559 5662392 Spea_1999 Shewanella pealeana ATCC 700345 DNA polymerase III subunit epsilon YP_001501854.1 2422912 R 398579 CDS YP_001501855.1 157961821 5662393 2423747..2424892 1 NC_009901.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: sbl:Sbal_2354 cupin 4 family protein; cupin 4 family protein 2424892 5662393 Spea_2000 Shewanella pealeana ATCC 700345 cupin 4 family protein YP_001501855.1 2423747 D 398579 CDS YP_001501856.1 157961822 5662394 complement(2425066..2425956) 1 NC_009901.1 KEGG: rme:Rmet_1758 hypothetical protein; hypothetical protein 2425956 5662394 Spea_2001 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501856.1 2425066 R 398579 CDS YP_001501857.1 157961823 5662395 2426244..2426756 1 NC_009901.1 KEGG: vfi:VF0656 transcription elongation factor; GreA/GreB family elongation factor 2426756 5662395 Spea_2002 Shewanella pealeana ATCC 700345 GreA/GreB family elongation factor YP_001501857.1 2426244 D 398579 CDS YP_001501858.1 157961824 5662396 2426831..2427190 1 NC_009901.1 hypothetical protein 2427190 5662396 Spea_2003 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501858.1 2426831 D 398579 CDS YP_001501859.1 157961825 5662397 complement(2427291..2428826) 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: sbm:Shew185_4294 transcriptional regulator, XRE family; XRE family transcriptional regulator 2428826 5662397 Spea_2004 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001501859.1 2427291 R 398579 CDS YP_001501860.1 157961826 5662398 2428976..2429491 1 NC_009901.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 2429491 5662398 Spea_2005 Shewanella pealeana ATCC 700345 malate synthase YP_001501860.1 2428976 D 398579 CDS YP_001501861.1 157961827 5662399 2429824..2431041 1 NC_009901.1 PFAM: Fmu (Sun) domain protein; KEGG: son:SO_2215 sun protein, putative; Fmu (Sun) domain-containing protein 2431041 5662399 Spea_2006 Shewanella pealeana ATCC 700345 Fmu (Sun) domain-containing protein YP_001501861.1 2429824 D 398579 CDS YP_001501862.1 157961828 5662400 complement(2431160..2433208) 1 NC_009901.1 PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: lpn:lpg2758 hypothetical protein; sulfatase 2433208 5662400 Spea_2007 Shewanella pealeana ATCC 700345 sulfatase YP_001501862.1 2431160 R 398579 CDS YP_001501863.1 157961829 5662401 2433784..2435088 1 NC_009901.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: pca:Pcar_1075 hypothetical protein; peptidoglycan-binding domain-containing protein 2435088 5662401 Spea_2008 Shewanella pealeana ATCC 700345 peptidoglycan-binding domain-containing protein YP_001501863.1 2433784 D 398579 CDS YP_001501864.1 157961830 5662402 2435098..2435499 1 NC_009901.1 KEGG: vvy:VV3211 transposase and inactivated derivative; transposase and inactivated derivative 2435499 5662402 Spea_2009 Shewanella pealeana ATCC 700345 transposase and inactivated derivative YP_001501864.1 2435098 D 398579 CDS YP_001501865.1 157961831 5662403 2436305..2436871 1 NC_009901.1 PFAM: peptidase A24A prepilin type IV; KEGG: pol:Bpro_2546 peptidase A24A, prepilin type IV; peptidase A24A prepilin type IV 2436871 5662403 Spea_2010 Shewanella pealeana ATCC 700345 peptidase A24A prepilin type IV YP_001501865.1 2436305 D 398579 CDS YP_001501866.1 157961832 5662404 2436882..2438204 1 NC_009901.1 SMART: AAA ATPase; KEGG: ppr:PBPRB0612 hypothetical protein; ATPase AAA 2438204 5662404 Spea_2011 Shewanella pealeana ATCC 700345 ATPase AAA YP_001501866.1 2436882 D 398579 CDS YP_001501867.1 157961833 5662405 2438231..2439049 1 NC_009901.1 PFAM: SAF domain protein; KEGG: vvu:VV1_1748 flp pilus assembly protein CpaB; SAF domain-containing protein 2439049 5662405 Spea_2012 Shewanella pealeana ATCC 700345 SAF domain-containing protein YP_001501867.1 2438231 D 398579 CDS YP_001501868.1 157961834 5662406 2439095..2440531 1 NC_009901.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: vvy:VV2660 flp pilus assembly protein, secretin CpaC; type II and III secretion system protein 2440531 5662406 Spea_2013 Shewanella pealeana ATCC 700345 type II and III secretion system protein YP_001501868.1 2439095 D 398579 CDS YP_001501869.1 157961835 5662407 2440615..2440860 1 NC_009901.1 hypothetical protein 2440860 5662407 Spea_2014 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501869.1 2440615 D 398579 CDS YP_001501870.1 157961836 5662408 2440901..2442238 1 NC_009901.1 KEGG: ppr:PBPRB0607 hypothetical protein; hypothetical protein 2442238 5662408 Spea_2015 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501870.1 2440901 D 398579 CDS YP_001501871.1 157961837 5662409 2442249..2442731 1 NC_009901.1 PFAM: TadE family protein; KEGG: ppr:PBPRB0606 hypothetical protein; TadE family protein 2442731 5662409 Spea_2016 Shewanella pealeana ATCC 700345 TadE family protein YP_001501871.1 2442249 D 398579 CDS YP_001501872.1 157961838 5662410 2442728..2443183 1 NC_009901.1 PFAM: TadE family protein; KEGG: ppr:PBPRB0605 hypothetical protein; TadE family protein 2443183 5662410 Spea_2017 Shewanella pealeana ATCC 700345 TadE family protein YP_001501872.1 2442728 D 398579 CDS YP_001501873.1 157961839 5662411 2443277..2444503 1 NC_009901.1 KEGG: vvy:VV2654 flp pilus assembly protein, ATPase CpaE; Flp pilus assembly protein ATPase CpaE-like protein 2444503 5662411 Spea_2018 Shewanella pealeana ATCC 700345 Flp pilus assembly protein ATPase CpaE-like protein YP_001501873.1 2443277 D 398579 CDS YP_001501874.1 157961840 5662412 2444505..2445833 1 NC_009901.1 PFAM: type II secretion system protein E; KEGG: ppr:PBPRB0603 putative pilus assembly protein; type II secretion system protein E 2445833 5662412 Spea_2019 Shewanella pealeana ATCC 700345 type II secretion system protein E YP_001501874.1 2444505 D 398579 CDS YP_001501875.1 157961841 5662413 2445845..2446822 1 NC_009901.1 PFAM: type II secretion system protein; KEGG: vpa:VP2411 putative tight adherence TadB-related transmembrane protein; type II secretion system protein 2446822 5662413 Spea_2020 Shewanella pealeana ATCC 700345 type II secretion system protein YP_001501875.1 2445845 D 398579 CDS YP_001501876.1 157961842 5662414 2446824..2447786 1 NC_009901.1 PFAM: type II secretion system protein; KEGG: ppr:PBPRB0601 hypothetical putative tight adherence TadC-related transmembrane protein; type II secretion system protein 2447786 5662414 Spea_2021 Shewanella pealeana ATCC 700345 type II secretion system protein YP_001501876.1 2446824 D 398579 CDS YP_001501877.1 157961843 5662415 2447811..2448866 1 NC_009901.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ppr:PBPRB0600 hypothetical protein; hypothetical protein 2448866 5662415 Spea_2022 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501877.1 2447811 D 398579 CDS YP_001501878.1 157961844 5662416 complement(2448962..2449309) 1 NC_009901.1 PFAM: hydrogenase expression/synthesis HypA; KEGG: shw:Sputw3181_2177 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 2449309 5662416 Spea_2023 Shewanella pealeana ATCC 700345 hydrogenase nickel incorporation protein HypA YP_001501878.1 2448962 R 398579 CDS YP_001501879.1 157961845 5662417 complement(2449309..2450325) 1 NC_009901.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: slo:Shew_1756 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2450325 5662417 Spea_2024 Shewanella pealeana ATCC 700345 hydrogenase expression/formation protein HypE YP_001501879.1 2449309 R 398579 CDS YP_001501880.1 157961846 5662418 complement(2450325..2451443) 1 NC_009901.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: slo:Shew_1757 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 2451443 5662418 Spea_2025 Shewanella pealeana ATCC 700345 hydrogenase expression/formation protein HypD YP_001501880.1 2450325 R 398579 CDS YP_001501881.1 157961847 5662419 complement(2451443..2451691) 1 NC_009901.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: saz:Sama_1672 hydrogenase assembly chaperone HypC/HupF; hydrogenase assembly chaperone HypC/HupF 2451691 5662419 Spea_2026 Shewanella pealeana ATCC 700345 hydrogenase assembly chaperone HypC/HupF YP_001501881.1 2451443 R 398579 CDS YP_001501882.1 157961848 5662420 complement(2451691..2452452) 1 NC_009901.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; KEGG: shw:Sputw3181_2173 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 2452452 5662420 Spea_2027 Shewanella pealeana ATCC 700345 hydrogenase nickel incorporation protein HypB YP_001501882.1 2451691 R 398579 CDS YP_001501883.1 157961849 5662421 complement(2452552..2454954) 1 NC_009901.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: slo:Shew_1760 (NiFe) hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2454954 5662421 Spea_2028 Shewanella pealeana ATCC 700345 (NiFe) hydrogenase maturation protein HypF YP_001501883.1 2452552 R 398579 CDS YP_001501884.1 157961850 5662422 complement(2454973..2456736) 1 NC_009901.1 KEGG: slo:Shew_1761 hypothetical protein; hypothetical protein 2456736 5662422 Spea_2029 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501884.1 2454973 R 398579 CDS YP_001501885.1 157961851 5662423 complement(2456723..2457280) 1 NC_009901.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52 hydrogen uptake protein; KEGG: shw:Sputw3181_1921 hydrogenase expression/formation protein; hydrogenase expression/formation protein 2457280 5662423 Spea_2030 Shewanella pealeana ATCC 700345 hydrogenase expression/formation protein YP_001501885.1 2456723 R 398579 CDS YP_001501886.1 157961852 5662424 complement(2457290..2457958) 1 NC_009901.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: slo:Shew_1763 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 2457958 5662424 Spea_2031 Shewanella pealeana ATCC 700345 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001501886.1 2457290 R 398579 CDS YP_001501887.1 157961853 5662425 complement(2457973..2459676) 1 NC_009901.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: slo:Shew_1764 nickel-dependent hydrogenase, large subunit; nickel-dependent hydrogenase large subunit 2459676 5662425 Spea_2032 Shewanella pealeana ATCC 700345 nickel-dependent hydrogenase large subunit YP_001501887.1 2457973 R 398579 CDS YP_001501888.1 157961854 5662426 complement(2459679..2460815) 1 NC_009901.1 KEGG: slo:Shew_1765 hydrogenase (NiFe) small subunit HydA; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; Nickel-iron dehydrogenase small subunit domain protein; hydrogenase (NiFe) small subunit HydA 2460815 5662426 Spea_2033 Shewanella pealeana ATCC 700345 hydrogenase (NiFe) small subunit HydA YP_001501888.1 2459679 R 398579 CDS YP_001501889.1 157961855 5662427 complement(2461238..2462638) 1 NC_009901.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2462638 asnC 5662427 asnC Shewanella pealeana ATCC 700345 asparaginyl-tRNA synthetase YP_001501889.1 2461238 R 398579 CDS YP_001501890.1 157961856 5662428 2462838..2463125 1 NC_009901.1 KEGG: sdn:Sden_1957 hypothetical protein; hypothetical protein 2463125 5662428 Spea_2035 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501890.1 2462838 D 398579 CDS YP_001501891.1 157961857 5662429 complement(2463164..2463757) 1 NC_009901.1 PFAM: NUDIX hydrolase; KEGG: slo:Shew_1902 NUDIX hydrolase; NUDIX hydrolase 2463757 5662429 Spea_2036 Shewanella pealeana ATCC 700345 NUDIX hydrolase YP_001501891.1 2463164 R 398579 CDS YP_001501892.1 157961858 5662430 complement(2463805..2465277) 1 NC_009901.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: shw:Sputw3181_2219 para-aminobenzoate synthase, subunit I; para-aminobenzoate synthase subunit I 2465277 5662430 Spea_2037 Shewanella pealeana ATCC 700345 para-aminobenzoate synthase subunit I YP_001501892.1 2463805 R 398579 CDS YP_001501893.1 157961859 5662431 2465456..2466976 1 NC_009901.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: slo:Shew_1904 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 2466976 5662431 Spea_2038 Shewanella pealeana ATCC 700345 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001501893.1 2465456 D 398579 CDS YP_001501894.1 157961860 5662432 2467255..2469306 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: slo:Shew_1905 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 2469306 5662432 Spea_2039 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001501894.1 2467255 D 398579 CDS YP_001501895.1 157961861 5662433 complement(2469484..2470050) 1 NC_009901.1 KEGG: shw:Sputw3181_3605 methylation site containing protein; hypothetical protein 2470050 5662433 Spea_2040 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501895.1 2469484 R 398579 CDS YP_001501896.1 157961862 5662434 complement(2470491..2472074) 1 NC_009901.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 2472074 5662434 Spea_2041 Shewanella pealeana ATCC 700345 isocitrate lyase YP_001501896.1 2470491 R 398579 CDS YP_001501897.1 157961863 5662435 2472185..2473129 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sfr:Sfri_3138 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 2473129 5662435 Spea_2042 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001501897.1 2472185 D 398579 CDS YP_001501898.1 157961864 5662436 2473349..2475523 1 NC_009901.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 2475523 5662436 Spea_2043 Shewanella pealeana ATCC 700345 malate synthase G YP_001501898.1 2473349 D 398579 CDS YP_001501899.1 157961865 5662437 complement(2475595..2478210) 1 NC_009901.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: slo:Shew_1910 iron-containing alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2478210 5662437 Spea_2044 Shewanella pealeana ATCC 700345 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_001501899.1 2475595 R 398579 CDS YP_001501900.1 157961866 5662438 2478541..2479164 1 NC_009901.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: slo:Shew_1911 multiple antibiotic resistance (MarC)-related protein; hypothetical protein 2479164 5662438 Spea_2045 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501900.1 2478541 D 398579 CDS YP_001501901.1 157961867 5662439 complement(2479241..2480575) 1 NC_009901.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2480575 5662439 Spea_2046 Shewanella pealeana ATCC 700345 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001501901.1 2479241 R 398579 CDS YP_001501902.1 157961868 5662440 complement(2480594..2481181) 1 NC_009901.1 KEGG: son:SO_2484 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; hypothetical protein 2481181 5662440 Spea_2047 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501902.1 2480594 R 398579 CDS YP_001501903.1 157961869 5662441 complement(2481285..2482499) 1 NC_009901.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2482499 5662441 Spea_2048 Shewanella pealeana ATCC 700345 aminotransferase AlaT YP_001501903.1 2481285 R 398579 CDS YP_001501904.1 157961870 5662442 complement(2482835..2483395) 1 NC_009901.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2483395 5662442 Spea_2049 Shewanella pealeana ATCC 700345 elongation factor P YP_001501904.1 2482835 R 398579 CDS YP_001501905.1 157961871 5662443 complement(2483440..2484654) 1 NC_009901.1 KEGG: shm:Shewmr7_1938 hypothetical protein; hypothetical protein 2484654 5662443 Spea_2050 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501905.1 2483440 R 398579 CDS YP_001501906.1 157961872 5662444 complement(2484779..2485306) 1 NC_009901.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 2485306 5662444 Spea_2051 Shewanella pealeana ATCC 700345 flavodoxin FldA YP_001501906.1 2484779 R 398579 CDS YP_001501907.1 157961873 5662445 complement(2485363..2485635) 1 NC_009901.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: slo:Shew_1918 CopG domain protein DNA-binding domain protein; LexA regulated protein 2485635 5662445 Spea_2052 Shewanella pealeana ATCC 700345 LexA regulated protein YP_001501907.1 2485363 R 398579 CDS YP_001501908.1 157961874 5662446 complement(2485647..2485868) 1 NC_009901.1 KEGG: son:SO_2332 hypothetical protein; hypothetical protein 2485868 5662446 Spea_2053 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501908.1 2485647 R 398579 CDS YP_001501909.1 157961875 5662447 complement(2485965..2486723) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: sbl:Sbal_4513 hypothetical protein; alpha/beta hydrolase fold protein 2486723 5662447 Spea_2054 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001501909.1 2485965 R 398579 CDS YP_001501910.1 157961876 5662448 2486928..2487536 1 NC_009901.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 2487536 5662448 Spea_2055 Shewanella pealeana ATCC 700345 replication initiation regulator SeqA YP_001501910.1 2486928 D 398579 CDS YP_001501911.1 157961877 5662449 2487611..2489257 1 NC_009901.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2489257 5662449 Spea_2056 Shewanella pealeana ATCC 700345 phosphoglucomutase YP_001501911.1 2487611 D 398579 CDS YP_001501912.1 157961878 5662450 complement(2489806..2490237) 1 NC_009901.1 KEGG: sun:SUN_2117 hypothetical protein; hypothetical protein 2490237 5662450 Spea_2057 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501912.1 2489806 R 398579 CDS YP_001501913.1 157961879 5662451 complement(2490368..2490739) 1 NC_009901.1 KEGG: neu:NE2100 hypothetical protein; hypothetical protein 2490739 5662451 Spea_2058 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501913.1 2490368 R 398579 CDS YP_001501914.1 157961880 5662452 complement(2490814..2491299) 1 NC_009901.1 PFAM: Domain of unknown function DUF1863; KEGG: shm:Shewmr7_1038 hypothetical protein; hypothetical protein 2491299 5662452 Spea_2059 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501914.1 2490814 R 398579 CDS YP_001501915.1 157961881 5662453 2492212..2492955 1 NC_009901.1 KEGG: cbe:Cbei_2806 hypothetical protein; hypothetical protein 2492955 5662453 Spea_2060 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501915.1 2492212 D 398579 CDS YP_001501916.1 157961882 5662454 complement(2493222..2496497) 1 NC_009901.1 KEGG: sbo:SBO_1384 hypothetical protein; hypothetical protein 2496497 5662454 Spea_2061 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501916.1 2493222 R 398579 CDS YP_001501917.1 157961883 5662455 complement(2497076..2497486) 1 NC_009901.1 PFAM: ferredoxin; KEGG: slo:Shew_1944 ferredoxin; ferredoxin 2497486 5662455 Spea_2062 Shewanella pealeana ATCC 700345 ferredoxin YP_001501917.1 2497076 R 398579 CDS YP_001501918.1 157961884 5662456 complement(2497455..2498585) 1 NC_009901.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 2498585 nrdB 5662456 nrdB Shewanella pealeana ATCC 700345 ribonucleotide-diphosphate reductase subunit beta YP_001501918.1 2497455 R 398579 CDS YP_001501919.1 157961885 5662457 complement(2498658..2500946) 1 NC_009901.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2500946 5662457 Spea_2064 Shewanella pealeana ATCC 700345 ribonucleotide-diphosphate reductase subunit alpha YP_001501919.1 2498658 R 398579 CDS YP_001501920.1 157961886 5662458 complement(2501398..2502081) 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sfr:Sfri_2132 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 2502081 5662458 Spea_2065 Shewanella pealeana ATCC 700345 HAD family hydrolase YP_001501920.1 2501398 R 398579 CDS YP_001501921.1 157961887 5662459 complement(2502074..2502784) 1 NC_009901.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2502784 5662459 Spea_2066 Shewanella pealeana ATCC 700345 3-demethylubiquinone-9 3-methyltransferase YP_001501921.1 2502074 R 398579 CDS YP_001501922.1 157961888 5662460 2503066..2505777 1 NC_009901.1 KEGG: sfr:Sfri_2130 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 2505777 5662460 Spea_2067 Shewanella pealeana ATCC 700345 DNA gyrase subunit A YP_001501922.1 2503066 D 398579 CDS YP_001501923.1 157961889 5662461 complement(2506347..2507504) 1 NC_009901.1 PFAM: beta-lactamase; KEGG: slo:Shew_1968 beta-lactamase; beta-lactamase 2507504 5662461 Spea_2068 Shewanella pealeana ATCC 700345 beta-lactamase YP_001501923.1 2506347 R 398579 CDS YP_001501924.1 157961890 5662462 2508137..2509228 1 NC_009901.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2509228 5662462 Spea_2069 Shewanella pealeana ATCC 700345 phosphoserine aminotransferase YP_001501924.1 2508137 D 398579 CDS YP_001501925.1 157961891 5662463 complement(2509307..2510500) 1 NC_009901.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2510500 5662463 Spea_2070 Shewanella pealeana ATCC 700345 aromatic amino acid aminotransferase YP_001501925.1 2509307 R 398579 CDS YP_001501926.1 157961892 5662464 2510909..2512189 1 NC_009901.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2512189 5662464 Spea_2071 Shewanella pealeana ATCC 700345 3-phosphoshikimate 1-carboxyvinyltransferase YP_001501926.1 2510909 D 398579 CDS YP_001501927.1 157961893 5662465 2512366..2513058 1 NC_009901.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2513058 cmk 5662465 cmk Shewanella pealeana ATCC 700345 cytidylate kinase YP_001501927.1 2512366 D 398579 CDS YP_001501928.1 157961894 5662466 2513156..2514823 1 NC_009901.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2514823 rpsA 5662466 rpsA Shewanella pealeana ATCC 700345 30S ribosomal protein S1 YP_001501928.1 2513156 D 398579 CDS YP_001501929.1 157961895 5662467 2514896..2515183 1 NC_009901.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2515183 ihfB 5662467 ihfB Shewanella pealeana ATCC 700345 integration host factor subunit beta YP_001501929.1 2514896 D 398579 CDS YP_001501930.1 157961896 5662468 2515294..2515614 1 NC_009901.1 PFAM: protein of unknown function DUF1049; KEGG: slo:Shew_1956 protein of unknown function DUF1049; hypothetical protein 2515614 5662468 Spea_2075 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501930.1 2515294 D 398579 CDS YP_001501931.1 157961897 5662469 2515616..2516776 1 NC_009901.1 KEGG: slo:Shew_1957 hypothetical protein; hypothetical protein 2516776 5662469 Spea_2076 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501931.1 2515616 D 398579 CDS YP_001501932.1 157961898 5662470 2516843..2517538 1 NC_009901.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2517538 5662470 Spea_2077 Shewanella pealeana ATCC 700345 orotidine 5'-phosphate decarboxylase YP_001501932.1 2516843 D 398579 CDS YP_001501933.1 157961899 5662471 2517614..2518420 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sfr:Sfri_2118 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2518420 5662471 Spea_2078 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001501933.1 2517614 D 398579 CDS YP_001501934.1 157961900 5662472 2518482..2519024 1 NC_009901.1 KEGG: slo:Shew_1960 hypothetical protein; hypothetical protein 2519024 5662472 Spea_2079 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501934.1 2518482 D 398579 CDS YP_001501935.1 157961901 5662473 complement(2519235..2520182) 1 NC_009901.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: shm:Shewmr7_1720 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 2520182 5662473 Spea_2080 Shewanella pealeana ATCC 700345 magnesium and cobalt transport protein CorA YP_001501935.1 2519235 R 398579 CDS YP_001501936.1 157961902 5662474 2520504..2522264 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: she:Shewmr4_1931 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2522264 5662474 Spea_2081 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001501936.1 2520504 D 398579 CDS YP_001501937.1 157961903 5662475 complement(2522377..2523774) 1 NC_009901.1 KEGG: slo:Shew_1962 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2523774 5662475 Spea_2082 Shewanella pealeana ATCC 700345 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001501937.1 2522377 R 398579 CDS YP_001501938.1 157961904 5662476 complement(2523994..2524170) 1 NC_009901.1 KEGG: sbl:Sbal_2079 hypothetical protein; hypothetical protein 2524170 5662476 Spea_2083 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501938.1 2523994 R 398579 CDS YP_001501939.1 157961905 5662477 2524424..2524756 1 NC_009901.1 PFAM: Domain of unknown function DUF1904; KEGG: slo:Shew_1964 hypothetical protein; hypothetical protein 2524756 5662477 Spea_2084 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501939.1 2524424 D 398579 CDS YP_001501940.1 157961906 5662478 2524740..2526080 1 NC_009901.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 2526080 pssA 5662478 pssA Shewanella pealeana ATCC 700345 phosphatidylserine synthase YP_001501940.1 2524740 D 398579 CDS YP_001501941.1 157961907 5662479 2526195..2526956 1 NC_009901.1 PFAM: DTW domain containing protein; KEGG: shw:Sputw3181_1985 DTW domain containing protein; DTW domain-containing protein 2526956 5662479 Spea_2086 Shewanella pealeana ATCC 700345 DTW domain-containing protein YP_001501941.1 2526195 D 398579 CDS YP_001501942.1 157961908 5662480 2527076..2527315 1 NC_009901.1 hypothetical protein 2527315 5662480 Spea_2087 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501942.1 2527076 D 398579 CDS YP_001501943.1 157961909 5662481 complement(2527340..2527939) 1 NC_009901.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: slo:Shew_1969 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2527939 5662481 Spea_2088 Shewanella pealeana ATCC 700345 two component LuxR family transcriptional regulator YP_001501943.1 2527340 R 398579 CDS YP_001501944.1 157961910 5662482 complement(2527932..2529722) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: slo:Shew_1970 histidine kinase; histidine kinase 2529722 5662482 Spea_2089 Shewanella pealeana ATCC 700345 histidine kinase YP_001501944.1 2527932 R 398579 CDS YP_001501945.1 157961911 5662483 complement(2530063..2531346) 1 NC_009901.1 PFAM: ApbE family lipoprotein; KEGG: slo:Shew_1971 ApbE family lipoprotein; ApbE family lipoprotein 2531346 5662483 Spea_2090 Shewanella pealeana ATCC 700345 ApbE family lipoprotein YP_001501945.1 2530063 R 398579 CDS YP_001501946.1 157961912 5662484 2531477..2532820 1 NC_009901.1 PFAM: FMN-binding domain protein; KEGG: slo:Shew_1972 FMN-binding domain protein; FMN-binding domain-containing protein 2532820 5662484 Spea_2091 Shewanella pealeana ATCC 700345 FMN-binding domain-containing protein YP_001501946.1 2531477 D 398579 CDS YP_001501947.1 157961913 5662485 2532902..2533942 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_1973 porin, gram-negative type; porin 2533942 5662485 Spea_2092 Shewanella pealeana ATCC 700345 porin YP_001501947.1 2532902 D 398579 CDS YP_001501948.1 157961914 5662486 2534506..2535288 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: asa:ASA_2900 ribosomal large subunit pseudouridine synthase A; pseudouridine synthase 2535288 5662486 Spea_2093 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001501948.1 2534506 D 398579 CDS YP_001501949.1 157961915 5662487 complement(2535348..2536550) 1 NC_009901.1 PFAM: integrase family protein; KEGG: sbm:Shew185_2263 phage integrase family protein; integrase family protein 2536550 5662487 Spea_2094 Shewanella pealeana ATCC 700345 integrase family protein YP_001501949.1 2535348 R 398579 CDS YP_001501950.1 157961916 5662488 2537317..2537817 1 NC_009901.1 KEGG: sbm:Shew185_2262 hypothetical protein; hypothetical protein 2537817 5662488 Spea_2095 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501950.1 2537317 D 398579 CDS YP_001501951.1 157961917 5662489 complement(2537984..2539006) 1 NC_009901.1 PFAM: protein of unknown function DUF227; SMART: CHK kinase-like; KEGG: slo:Shew_2009 hypothetical protein; hypothetical protein 2539006 5662489 Spea_2096 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501951.1 2537984 R 398579 CDS YP_001501952.1 157961918 5662490 2539157..2539546 1 NC_009901.1 KEGG: vpa:VPA1278 hypothetical protein; hypothetical protein 2539546 5662490 Spea_2097 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501952.1 2539157 D 398579 CDS YP_001501953.1 157961919 5662491 complement(2539792..2540286) 1 NC_009901.1 KEGG: pha:PSHAb0058 putative orphan protein; putative orphan protein 2540286 5662491 Spea_2098 Shewanella pealeana ATCC 700345 putative orphan protein YP_001501953.1 2539792 R 398579 CDS YP_001501954.1 157961920 5662492 complement(2540289..2542745) 1 NC_009901.1 KEGG: pat:Patl_4270 putative Zn-dependent aminopeptidase; putative Zn-dependent aminopeptidase 2542745 5662492 Spea_2099 Shewanella pealeana ATCC 700345 putative Zn-dependent aminopeptidase YP_001501954.1 2540289 R 398579 CDS YP_001501955.1 157961921 5662493 2542979..2543674 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: vfi:VF1658 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2543674 5662493 Spea_2100 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001501955.1 2542979 D 398579 CDS YP_001501956.1 157961922 5662494 2543977..2545353 1 NC_009901.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; protein of unknown function DUF785; RimK domain protein ATP-grasp; KEGG: fjo:Fjoh_2582 alpha-L-glutamate ligase, RimK family; alpha-L-glutamate ligase 2545353 5662494 Spea_2101 Shewanella pealeana ATCC 700345 alpha-L-glutamate ligase YP_001501956.1 2543977 D 398579 CDS YP_001501957.1 157961923 5662495 2545570..2545845 1 NC_009901.1 KEGG: slo:Shew_2004 hypothetical protein; hypothetical protein 2545845 5662495 Spea_2102 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501957.1 2545570 D 398579 CDS YP_001501958.1 157961924 5662496 2546011..2546343 1 NC_009901.1 hypothetical protein 2546343 5662496 Spea_2103 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501958.1 2546011 D 398579 CDS YP_001501959.1 157961925 5662497 complement(2546540..2547550) 1 NC_009901.1 KEGG: slo:Shew_2002 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 2547550 5662497 Spea_2104 Shewanella pealeana ATCC 700345 glyceraldehyde-3-phosphate dehydrogenase YP_001501959.1 2546540 R 398579 CDS YP_001501960.1 157961926 5662498 complement(2547769..2548602) 1 NC_009901.1 KEGG: slo:Shew_2001 hypothetical protein; hypothetical protein 2548602 5662498 Spea_2105 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501960.1 2547769 R 398579 CDS YP_001501961.1 157961927 5662499 2548825..2550261 1 NC_009901.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 2550261 5662499 Spea_2106 Shewanella pealeana ATCC 700345 glyceraldehyde-3-phosphate dehydrogenase YP_001501961.1 2548825 D 398579 CDS YP_001501962.1 157961928 5664755 complement(2553406..2553735) 1 NC_009901.1 PFAM: DsrC family protein; KEGG: shm:Shewmr7_2007 DsrC family protein; DsrC family protein 2553735 5664755 Spea_2107 Shewanella pealeana ATCC 700345 DsrC family protein YP_001501962.1 2553406 R 398579 CDS YP_001501963.1 157961929 5662501 complement(2553737..2554018) 1 NC_009901.1 PFAM: DsrH family protein; KEGG: shn:Shewana3_2057 DsrH family protein; DsrH family protein 2554018 5662501 Spea_2108 Shewanella pealeana ATCC 700345 DsrH family protein YP_001501963.1 2553737 R 398579 CDS YP_001501964.1 157961930 5662502 complement(2554018..2554374) 1 NC_009901.1 PFAM: DsrE family protein; KEGG: sbm:Shew185_2207 DsrE family protein; DsrE family protein 2554374 5662502 Spea_2109 Shewanella pealeana ATCC 700345 DsrE family protein YP_001501964.1 2554018 R 398579 CDS YP_001501965.1 157961931 5662503 complement(2554383..2554772) 1 NC_009901.1 PFAM: DsrE family protein; KEGG: slo:Shew_2015 DsrE family protein; DsrE family protein 2554772 5662503 Spea_2110 Shewanella pealeana ATCC 700345 DsrE family protein YP_001501965.1 2554383 R 398579 CDS YP_001501966.1 157961932 5662504 complement(2554830..2555492) 1 NC_009901.1 PFAM: protein of unknown function UPF0005; KEGG: sbm:Shew185_2205 protein of unknown function UPF0005; hypothetical protein 2555492 5662504 Spea_2111 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501966.1 2554830 R 398579 CDS YP_001501967.1 157961933 5662505 complement(2555664..2556566) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_2013 transcriptional regulator, LysR family; putative DNA-binding transcriptional regulator 2556566 5662505 Spea_2112 Shewanella pealeana ATCC 700345 putative DNA-binding transcriptional regulator YP_001501967.1 2555664 R 398579 CDS YP_001501968.1 157961934 5662506 2556685..2557929 1 NC_009901.1 uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 2557929 5662506 Spea_2113 Shewanella pealeana ATCC 700345 inner membrane transport protein YdhC YP_001501968.1 2556685 D 398579 CDS YP_001501969.1 157961935 5664756 complement(2558294..2559073) 1 NC_009901.1 KEGG: pha:PSHAa2145 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase; 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase 2559073 5664756 Spea_2114 Shewanella pealeana ATCC 700345 3 alpha-hydroxysteroid dehydrogenase/carbonyl reductase YP_001501969.1 2558294 R 398579 CDS YP_001501970.1 157961936 5662508 complement(2559224..2560579) 1 NC_009901.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: pha:PSHAa2144 transporter; major facilitator transporter 2560579 5662508 Spea_2115 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001501970.1 2559224 R 398579 CDS YP_001501971.1 157961937 5662509 complement(2560582..2561604) 1 NC_009901.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 2561604 5662509 Spea_2116 Shewanella pealeana ATCC 700345 4-hydroxy-2-ketovalerate aldolase YP_001501971.1 2560582 R 398579 CDS YP_001501972.1 157961938 5662510 complement(2561614..2562537) 1 NC_009901.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 2562537 5662510 Spea_2117 Shewanella pealeana ATCC 700345 acetaldehyde dehydrogenase YP_001501972.1 2561614 R 398579 CDS YP_001501973.1 157961939 5662511 complement(2562584..2563399) 1 NC_009901.1 PFAM: Hydratase/decarboxylase; KEGG: pha:PSHAa2141 2-hydroxypent-2,4-dienoate hydratase (HPH) (2-oxopent-4-enoate hydratase); 4-oxalocrotonate decarboxylase 2563399 5662511 Spea_2118 Shewanella pealeana ATCC 700345 4-oxalocrotonate decarboxylase YP_001501973.1 2562584 R 398579 CDS YP_001501974.1 157961940 5662512 complement(2563410..2564378) 1 NC_009901.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pha:PSHAa2140 TesA protein; flavin reductase domain-containing protein 2564378 5662512 Spea_2119 Shewanella pealeana ATCC 700345 flavin reductase domain-containing protein YP_001501974.1 2563410 R 398579 CDS YP_001501975.1 157961941 5662513 2564669..2566093 1 NC_009901.1 PFAM: aldehyde dehydrogenase; KEGG: pha:PSHAa2139 aldehyde dehydrogenase; aldehyde dehydrogenase 2566093 5662513 Spea_2120 Shewanella pealeana ATCC 700345 aldehyde dehydrogenase YP_001501975.1 2564669 D 398579 CDS YP_001501976.1 157961942 5662514 complement(2566171..2567304) 1 NC_009901.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: pha:PSHAa2137 protein with ferredoxin subunits; Rieske (2Fe-2S) domain-containing protein 2567304 5662514 Spea_2121 Shewanella pealeana ATCC 700345 Rieske (2Fe-2S) domain-containing protein YP_001501976.1 2566171 R 398579 CDS YP_001501977.1 157961943 5662515 complement(2567365..2568750) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa2136 transporter; major facilitator transporter 2568750 5662515 Spea_2122 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001501977.1 2567365 R 398579 CDS YP_001501978.1 157961944 5662516 2568927..2570036 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: pha:PSHAa2135 metallo-dependent enzymatic protein; beta-lactamase domain-containing protein 2570036 5662516 Spea_2123 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001501978.1 2568927 D 398579 CDS YP_001501979.1 157961945 5662517 2570076..2571773 1 NC_009901.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pha:PSHAa2134 AMP-binding enzyme; AMP-dependent synthetase and ligase 2571773 5662517 Spea_2124 Shewanella pealeana ATCC 700345 AMP-dependent synthetase and ligase YP_001501979.1 2570076 D 398579 CDS YP_001501980.1 157961946 5662518 2572035..2573798 1 NC_009901.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: pha:PSHAa2133 3-ketosteroid-delta1-dehydrogenase; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2573798 5662518 Spea_2125 Shewanella pealeana ATCC 700345 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001501980.1 2572035 D 398579 CDS YP_001501981.1 157961947 5662519 2573987..2575627 1 NC_009901.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2575627 5662519 Spea_2126 Shewanella pealeana ATCC 700345 long-chain-fatty-acid--CoA ligase YP_001501981.1 2573987 D 398579 CDS YP_001501982.1 157961948 5662520 complement(2576334..2578784) 1 NC_009901.1 KEGG: reu:Reut_A1574 hypothetical protein; hypothetical protein 2578784 5662520 Spea_2127 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501982.1 2576334 R 398579 CDS YP_001501983.1 157961949 5662521 complement(2578799..2579803) 1 NC_009901.1 KEGG: reu:Reut_A1573 glycosyl hydrolase, BNR repeat; BNR repeat-containing glycosyl hydrolase 2579803 5662521 Spea_2128 Shewanella pealeana ATCC 700345 BNR repeat-containing glycosyl hydrolase YP_001501983.1 2578799 R 398579 CDS YP_001501984.1 157961950 5662522 2580214..2581437 1 NC_009901.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: pha:PSHAa0877 steroid degradation protein; acyl-CoA dehydrogenase type 2 2581437 5662522 Spea_2129 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase type 2 YP_001501984.1 2580214 D 398579 CDS YP_001501985.1 157961951 5662523 2581476..2582561 1 NC_009901.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pha:PSHAa0878 reductase protein; ferredoxin 2582561 5662523 Spea_2130 Shewanella pealeana ATCC 700345 ferredoxin YP_001501985.1 2581476 D 398579 CDS YP_001501986.1 157961952 5662524 2583010..2583798 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pha:PSHAa0879 3-oxoacyl-(ACP) reductase; short-chain dehydrogenase/reductase SDR 2583798 5662524 Spea_2131 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001501986.1 2583010 D 398579 CDS YP_001501987.1 157961953 5662525 2583806..2584909 1 NC_009901.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pha:PSHAa0880 NADPH dehydrogenase; NADH:flavin oxidoreductase 2584909 5662525 Spea_2132 Shewanella pealeana ATCC 700345 NADH:flavin oxidoreductase YP_001501987.1 2583806 D 398579 CDS YP_001501988.1 157961954 5662526 2584935..2585684 1 NC_009901.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: dar:Daro_1211 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 2585684 5662526 Spea_2133 Shewanella pealeana ATCC 700345 electron transfer flavoprotein subunit alpha/beta YP_001501988.1 2584935 D 398579 CDS YP_001501989.1 157961955 5662527 2585697..2586650 1 NC_009901.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: eba:ebA6510 electron transfer flavoprotein alpha subunit; electron transfer flavoprotein subunit alpha 2586650 5662527 Spea_2134 Shewanella pealeana ATCC 700345 electron transfer flavoprotein subunit alpha YP_001501989.1 2585697 D 398579 CDS YP_001501990.1 157961956 5662528 2586740..2587933 1 NC_009901.1 PFAM: regulatory protein LuxR; KEGG: pha:PSHAa0881 LuxR-type transcription regulator required for testosterone degradation; LuxR family transcriptional regulator 2587933 5662528 Spea_2135 Shewanella pealeana ATCC 700345 LuxR family transcriptional regulator YP_001501990.1 2586740 D 398579 CDS YP_001501991.1 157961957 5662529 complement(2588001..2588783) 1 NC_009901.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2588783 5662529 Spea_2136 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase YP_001501991.1 2588001 R 398579 CDS YP_001501992.1 157961958 5662530 2589023..2589793 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pha:PSHAa0883 short chain dehydrogenase; short chain dehydrogenase 2589793 5662530 Spea_2137 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001501992.1 2589023 D 398579 CDS YP_001501993.1 157961959 5662531 2589931..2590896 1 NC_009901.1 PFAM: protein of unknown function DUF35; KEGG: pha:PSHAa0884 hypothetical protein; hypothetical protein 2590896 5662531 Spea_2138 Shewanella pealeana ATCC 700345 hypothetical protein YP_001501993.1 2589931 D 398579 CDS YP_001501994.1 157961960 5662532 2590911..2592041 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pha:PSHAa0885 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2592041 5662532 Spea_2139 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001501994.1 2590911 D 398579 CDS YP_001501995.1 157961961 5662533 2592028..2592474 1 NC_009901.1 PFAM: MaoC domain protein dehydratase; KEGG: pha:PSHAa0886 hypothetical protein; dehydratase 2592474 5662533 Spea_2140 Shewanella pealeana ATCC 700345 dehydratase YP_001501995.1 2592028 D 398579 CDS YP_001501996.1 157961962 5662534 2592491..2593669 1 NC_009901.1 KEGG: pha:PSHAa0887 lipid-transfer protein; lipid-transfer protein 2593669 5662534 Spea_2141 Shewanella pealeana ATCC 700345 lipid-transfer protein YP_001501996.1 2592491 D 398579 CDS YP_001501997.1 157961963 5662535 2593672..2594841 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pha:PSHAa0888 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2594841 5662535 Spea_2142 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001501997.1 2593672 D 398579 CDS YP_001501998.1 157961964 5662536 2594861..2596099 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pha:PSHAa0889 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2596099 5662536 Spea_2143 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001501998.1 2594861 D 398579 CDS YP_001501999.1 157961965 5662537 2596096..2597301 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pha:PSHAa0890 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2597301 5662537 Spea_2144 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001501999.1 2596096 D 398579 CDS YP_001502000.1 157961966 5662538 2597670..2598146 1 NC_009901.1 PFAM: protein of unknown function DUF523; KEGG: mmw:Mmwyl1_2745 protein of unknown function DUF523; hypothetical protein 2598146 5662538 Spea_2145 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502000.1 2597670 D 398579 CDS YP_001502001.1 157961967 5662539 complement(2598332..2600452) 1 NC_009901.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pha:PSHAa0892 electron acceptor reductase/NADH oxidase, FAD binding, iron-sulfur cluster binding site; NADH:flavin oxidoreductase 2600452 5662539 Spea_2146 Shewanella pealeana ATCC 700345 NADH:flavin oxidoreductase YP_001502001.1 2598332 R 398579 CDS YP_001502002.1 157961968 5662540 complement(2600581..2601417) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: pha:PSHAa0893 hydrolase acting on oxygenated substrates (epoxide hydrolase); alpha/beta hydrolase fold protein 2601417 5662540 Spea_2147 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001502002.1 2600581 R 398579 CDS YP_001502003.1 157961969 5662541 2601739..2602482 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pha:PSHAa0894 3-ketoacyl-(ACP) reductase; short-chain dehydrogenase/reductase SDR 2602482 5662541 Spea_2148 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001502003.1 2601739 D 398579 CDS YP_001502004.1 157961970 5662542 2602492..2603118 1 NC_009901.1 KEGG: pha:PSHAa0895 enzyme; hypothetical protein 2603118 5662542 Spea_2149 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502004.1 2602492 D 398579 CDS YP_001502005.1 157961971 5662543 2603184..2605049 1 NC_009901.1 activates fatty acids by binding to coenzyme A; may be involved in acyclic terpene utilization; long-chain-acyl-CoA synthetase 2605049 5662543 Spea_2150 Shewanella pealeana ATCC 700345 long-chain-acyl-CoA synthetase YP_001502005.1 2603184 D 398579 CDS YP_001502006.1 157961972 5662544 2605062..2606273 1 NC_009901.1 KEGG: pha:PSHAa0897 nonspecific lipid-transfer protein; nonspecific lipid-transfer protein 2606273 5662544 Spea_2151 Shewanella pealeana ATCC 700345 nonspecific lipid-transfer protein YP_001502006.1 2605062 D 398579 CDS YP_001502007.1 157961973 5662545 2606276..2607211 1 NC_009901.1 PFAM: MaoC domain protein dehydratase; protein of unknown function DUF35; KEGG: pha:PSHAa0898 acyl dehydratase; hypothetical protein 2607211 5662545 Spea_2152 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502007.1 2606276 D 398579 CDS YP_001502008.1 157961974 5662546 2607403..2608305 1 NC_009901.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pha:PSHAa0900 dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 2608305 5662546 Spea_2153 Shewanella pealeana ATCC 700345 glyoxalase/bleomycin resistance protein/dioxygenase YP_001502008.1 2607403 D 398579 CDS YP_001502009.1 157961975 5662547 2608306..2609181 1 NC_009901.1 PFAM: coenzyme A transferase; KEGG: pha:PSHAa0901 acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; coenzyme A transferase 2609181 5662547 Spea_2154 Shewanella pealeana ATCC 700345 coenzyme A transferase YP_001502009.1 2608306 D 398579 CDS YP_001502010.1 157961976 5662548 2609256..2610086 1 NC_009901.1 PFAM: coenzyme A transferase; KEGG: pha:PSHAa0902 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; coenzyme A transferase 2610086 5662548 Spea_2155 Shewanella pealeana ATCC 700345 coenzyme A transferase YP_001502010.1 2609256 D 398579 CDS YP_001502011.1 157961977 5662549 2610086..2611042 1 NC_009901.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2611042 5662549 Spea_2156 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase YP_001502011.1 2610086 D 398579 CDS YP_001502012.1 157961978 5662550 2611039..2612193 1 NC_009901.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: pha:PSHAa0904 dioxygenase; 2-nitropropane dioxygenase 2612193 5662550 Spea_2157 Shewanella pealeana ATCC 700345 2-nitropropane dioxygenase YP_001502012.1 2611039 D 398579 CDS YP_001502013.1 157961979 5662551 2612196..2612981 1 NC_009901.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2612981 5662551 Spea_2158 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase YP_001502013.1 2612196 D 398579 CDS YP_001502014.1 157961980 5662552 2613011..2614168 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pha:PSHAa0906 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2614168 5662552 Spea_2159 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001502014.1 2613011 D 398579 CDS YP_001502015.1 157961981 5662553 2614177..2615253 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pha:PSHAa0907 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 2615253 5662553 Spea_2160 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001502015.1 2614177 D 398579 CDS YP_001502016.1 157961982 5662554 2615253..2616407 1 NC_009901.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2616407 5662554 Spea_2161 Shewanella pealeana ATCC 700345 acetyl-CoA acetyltransferase YP_001502016.1 2615253 D 398579 CDS YP_001502017.1 157961983 5662555 2616463..2617341 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pha:PSHAa0909 short chain dehydrogenase; short chain dehydrogenase 2617341 5662555 Spea_2162 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001502017.1 2616463 D 398579 CDS YP_001502018.1 157961984 5662556 2617412..2619007 1 NC_009901.1 PFAM: Amidase; KEGG: pha:PSHAa0910 allophanate hydrolase; amidase 2619007 5662556 Spea_2163 Shewanella pealeana ATCC 700345 amidase YP_001502018.1 2617412 D 398579 CDS YP_001502019.1 157961985 5662557 2619714..2620526 1 NC_009901.1 KEGG: son:SO_4704 hypothetical protein; hypothetical protein 2620526 5662557 Spea_2164 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502019.1 2619714 D 398579 CDS YP_001502020.1 157961986 5662558 2620704..2621144 1 NC_009901.1 hypothetical protein 2621144 5662558 Spea_2165 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502020.1 2620704 D 398579 CDS YP_001502021.1 157961987 5662559 complement(2622091..2623617) 1 NC_009901.1 PFAM: protein of unknown function DUF1302; KEGG: bur:Bcep18194_B1461 protein of unknown function DUF1302; hypothetical protein 2623617 5662559 Spea_2166 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502021.1 2622091 R 398579 CDS YP_001502022.1 157961988 5662560 complement(2623644..2625029) 1 NC_009901.1 PFAM: protein of unknown function DUF1329; KEGG: reu:Reut_A1519 protein of unknown function DUF1329; hypothetical protein 2625029 5662560 Spea_2167 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502022.1 2623644 R 398579 CDS YP_001502023.1 157961989 5662561 2625425..2626210 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pha:PSHAa2151 short chain dehydrogenase; short chain dehydrogenase 2626210 5662561 Spea_2168 Shewanella pealeana ATCC 700345 short chain dehydrogenase YP_001502023.1 2625425 D 398579 CDS YP_001502024.1 157961990 5662562 2626222..2626707 1 NC_009901.1 PFAM: MaoC domain protein dehydratase; KEGG: pha:PSHAa2150 MaoC-like deshydratase domain; dehydratase 2626707 5662562 Spea_2169 Shewanella pealeana ATCC 700345 dehydratase YP_001502024.1 2626222 D 398579 CDS YP_001502025.1 157961991 5662563 2626720..2627925 1 NC_009901.1 KEGG: reu:Reut_A1572 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 2627925 5662563 Spea_2170 Shewanella pealeana ATCC 700345 acetyl-CoA acetyltransferase YP_001502025.1 2626720 D 398579 CDS YP_001502026.1 157961992 5662564 2627940..2628788 1 NC_009901.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: pat:Patl_3812 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2628788 5662564 Spea_2171 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase/isomerase YP_001502026.1 2627940 D 398579 CDS YP_001502027.1 157961993 5662565 2628853..2630499 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: pen:PSEEN3660 electron transfer flavoprotein-ubiquinone oxidoreductase; electron-transferring-flavoprotein dehydrogenase 2630499 5662565 Spea_2172 Shewanella pealeana ATCC 700345 electron-transferring-flavoprotein dehydrogenase YP_001502027.1 2628853 D 398579 CDS YP_001502028.1 157961994 5662566 2630610..2631374 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gme:Gmet_2217 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2631374 5662566 Spea_2173 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001502028.1 2630610 D 398579 CDS YP_001502029.1 157961995 5662567 2631413..2631784 1 NC_009901.1 PFAM: nuclear transport factor 2; KEGG: nca:Noca_3954 nuclear transport factor 2; nuclear transport factor 2 2631784 5662567 Spea_2174 Shewanella pealeana ATCC 700345 nuclear transport factor 2 YP_001502029.1 2631413 D 398579 CDS YP_001502030.1 157961996 5662568 2631837..2633042 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: pha:PSHAa2131 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2633042 5662568 Spea_2175 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001502030.1 2631837 D 398579 CDS YP_001502031.1 157961997 5662569 2633042..2634232 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: pha:PSHAa2130 acyl-CoA dehydrogenase protein; acyl-CoA dehydrogenase domain-containing protein 2634232 5662569 Spea_2176 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001502031.1 2633042 D 398579 CDS YP_001502032.1 157961998 5662570 complement(2634341..2637514) 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: sfr:Sfri_1929 acriflavin resistance protein; acriflavin resistance protein 2637514 5662570 Spea_2177 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001502032.1 2634341 R 398579 CDS YP_001502033.1 157961999 5662571 complement(2637518..2638711) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sfr:Sfri_1930 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2638711 5662571 Spea_2178 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001502033.1 2637518 R 398579 CDS YP_001502034.1 157962000 5662572 complement(2639206..2639541) 1 NC_009901.1 PFAM: SEC-C motif domain protein; KEGG: shw:Sputw3181_1017 sec-C motif domain protein; SecC motif-containing protein 2639541 5662572 Spea_2179 Shewanella pealeana ATCC 700345 SecC motif-containing protein YP_001502034.1 2639206 R 398579 CDS YP_001502035.1 157962001 5662573 2639909..2640829 1 NC_009901.1 catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 2640829 5662573 Spea_2180 Shewanella pealeana ATCC 700345 putative manganese-dependent inorganic pyrophosphatase YP_001502035.1 2639909 D 398579 CDS YP_001502036.1 157962002 5662574 complement(2640913..2643300) 1 NC_009901.1 KEGG: ppr:PBPRB0364 putative ATP-dependent protease La-relatedprotein; putative ATP-dependent protease La-likeprotein 2643300 5662574 Spea_2181 Shewanella pealeana ATCC 700345 putative ATP-dependent protease La-likeprotein YP_001502036.1 2640913 R 398579 CDS YP_001502037.1 157962003 5662575 complement(2643631..2646048) 1 NC_009901.1 PFAM: peptidase U32; KEGG: ppr:PBPRA1758 putative collagenase family protease; peptidase U32 2646048 5662575 Spea_2182 Shewanella pealeana ATCC 700345 peptidase U32 YP_001502037.1 2643631 R 398579 CDS YP_001502038.1 157962004 5662576 2646480..2647532 1 NC_009901.1 KEGG: ppr:PBPRB1179 hypothetical protein; hypothetical protein 2647532 5662576 Spea_2183 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502038.1 2646480 D 398579 CDS YP_001502039.1 157962005 5662577 2647701..2648342 1 NC_009901.1 KEGG: sfr:Sfri_3117 hypothetical protein; hypothetical protein 2648342 5662577 Spea_2184 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502039.1 2647701 D 398579 CDS YP_001502040.1 157962006 5662578 complement(2648813..2649628) 1 NC_009901.1 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; putative metallothionein SmtA 2649628 5662578 Spea_2185 Shewanella pealeana ATCC 700345 putative metallothionein SmtA YP_001502040.1 2648813 R 398579 CDS YP_001502041.1 157962007 5662579 2650271..2651116 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: son:SO_A0149 hypothetical protein; beta-lactamase domain-containing protein 2651116 5662579 Spea_2186 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001502041.1 2650271 D 398579 CDS YP_001502042.1 157962008 5662580 complement(2651397..2652692) 1 NC_009901.1 Catalyzes the deamination of cytosine to uracil and ammonia; cytosine deaminase 2652692 5662580 Spea_2187 Shewanella pealeana ATCC 700345 cytosine deaminase YP_001502042.1 2651397 R 398579 CDS YP_001502043.1 157962009 5662581 complement(2652703..2653968) 1 NC_009901.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: vvu:VV2_0788 purine-cytosine permease; cytosine permease 2653968 codB 5662581 codB Shewanella pealeana ATCC 700345 cytosine permease YP_001502043.1 2652703 R 398579 CDS YP_001502044.1 157962010 5662582 2654391..2654663 1 NC_009901.1 KEGG: gur:Gura_3576 hypothetical protein; hypothetical protein 2654663 5662582 Spea_2189 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502044.1 2654391 D 398579 CDS YP_001502045.1 157962011 5662583 complement(2654786..2656330) 1 NC_009901.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: vvy:VVA0679 permease; EmrB/QacA family drug resistance transporter 2656330 5662583 Spea_2190 Shewanella pealeana ATCC 700345 EmrB/QacA family drug resistance transporter YP_001502045.1 2654786 R 398579 CDS YP_001502046.1 157962012 5662584 complement(2656332..2657396) 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: vvy:VVA0680 multidrug resistance efflux pump; secretion protein HlyD family protein 2657396 5662584 Spea_2191 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001502046.1 2656332 R 398579 CDS YP_001502047.1 157962013 5662585 2658015..2659241 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_2037 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2659241 5662585 Spea_2192 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001502047.1 2658015 D 398579 CDS YP_001502048.1 157962014 5662586 2659241..2662375 1 NC_009901.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_2036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 2662375 5662586 Spea_2193 Shewanella pealeana ATCC 700345 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001502048.1 2659241 D 398579 CDS YP_001502049.1 157962015 5662587 2662368..2663924 1 NC_009901.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: shm:Shewmr7_2035 RND efflux system, outer membrane lipoprotein, NodT family; RND efflux system outer membrane lipoprotein 2663924 5662587 Spea_2194 Shewanella pealeana ATCC 700345 RND efflux system outer membrane lipoprotein YP_001502049.1 2662368 D 398579 CDS YP_001502050.1 157962016 5662588 complement(2664091..2665344) 1 NC_009901.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: sdn:Sden_3235 DNA-directed DNA polymerase; DNA-directed DNA polymerase 2665344 5662588 Spea_2195 Shewanella pealeana ATCC 700345 DNA-directed DNA polymerase YP_001502050.1 2664091 R 398579 CDS YP_001502051.1 157962017 5662589 complement(2665347..2665754) 1 NC_009901.1 PFAM: peptidase S24 and S26 domain protein; KEGG: sfr:Sfri_1963 putative prophage repressor; peptidase S24/S26 domain-containing protein 2665754 5662589 Spea_2196 Shewanella pealeana ATCC 700345 peptidase S24/S26 domain-containing protein YP_001502051.1 2665347 R 398579 CDS YP_001502052.1 157962018 5662590 2666018..2667334 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vfi:VFA0342 sensory transduction protein kinase; diguanylate cyclase 2667334 5662590 Spea_2197 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502052.1 2666018 D 398579 CDS YP_001502053.1 157962019 5662591 2667453..2668331 1 NC_009901.1 PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB0725 hypothetical protein; AraC family transcriptional regulator 2668331 5662591 Spea_2198 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001502053.1 2667453 D 398579 CDS YP_001502054.1 157962020 5662592 2668506..2669372 1 NC_009901.1 KEGG: ppr:PBPRB0729 hypothetical protein; hypothetical protein 2669372 5662592 Spea_2199 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502054.1 2668506 D 398579 CDS YP_001502055.1 157962021 5662593 2669574..2670488 1 NC_009901.1 PFAM: Appr-1-p processing domain protein; KEGG: ehi:379.t00002 conserved hypothetical protein Pfam: Macro SIR2 PROSITE: SIRTUIN; hypothetical protein 2670488 5662593 Spea_2200 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502055.1 2669574 D 398579 CDS YP_001502056.1 157962022 5662594 2670476..2671345 1 NC_009901.1 KEGG: ehi:379.t00002 conserved hypothetical protein Pfam: Macro SIR2 PROSITE: SIRTUIN; hypothetical protein 2671345 5662594 Spea_2201 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502056.1 2670476 D 398579 CDS YP_001502057.1 157962023 5662595 complement(2671677..2672060) 1 NC_009901.1 hypothetical protein 2672060 5662595 Spea_2202 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502057.1 2671677 R 398579 CDS YP_001502058.1 157962024 5662596 2672303..2672686 1 NC_009901.1 KEGG: cvi:CV_1450 hypothetical protein; hypothetical protein 2672686 5662596 Spea_2203 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502058.1 2672303 D 398579 CDS YP_001502059.1 157962025 5662597 2673302..2674417 1 NC_009901.1 KEGG: dme:Dmel_CG4335 CG4335; TIGRFAM: trimethyllysine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA; trimethyllysine dioxygenase 2674417 5662597 Spea_2204 Shewanella pealeana ATCC 700345 trimethyllysine dioxygenase YP_001502059.1 2673302 D 398579 CDS YP_001502060.1 157962026 5662598 2674405..2675418 1 NC_009901.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: gme:Gmet_0270 aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 2675418 5662598 Spea_2205 Shewanella pealeana ATCC 700345 threonine aldolase YP_001502060.1 2674405 D 398579 CDS YP_001502061.1 157962027 5662599 2675433..2676791 1 NC_009901.1 PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: cvi:CV_3432 probable amino acid permease; amino acid permease-associated protein 2676791 5662599 Spea_2206 Shewanella pealeana ATCC 700345 amino acid permease-associated protein YP_001502061.1 2675433 D 398579 CDS YP_001502062.1 157962028 5662600 complement(2676990..2677928) 1 NC_009901.1 KEGG: vha:VIBHAR_03071 hypothetical protein; hypothetical protein 2677928 5662600 Spea_2207 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502062.1 2676990 R 398579 CDS YP_001502063.1 157962029 5662601 complement(2680656..2681204) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vpa:VP1794 hypothetical protein; N-acetyltransferase GCN5 2681204 5662601 Spea_2208 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502063.1 2680656 R 398579 CDS YP_001502064.1 157962030 5662602 complement(2681333..2681905) 1 NC_009901.1 KEGG: cps:CPS_3017 hypothetical protein; hypothetical protein 2681905 5662602 Spea_2209 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502064.1 2681333 R 398579 CDS YP_001502065.1 157962031 5662603 complement(2683156..2683710) 1 NC_009901.1 hypothetical protein 2683710 5662603 Spea_2210 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502065.1 2683156 R 398579 CDS YP_001502066.1 157962032 5662604 complement(2684377..2685669) 1 NC_009901.1 PFAM: integrase family protein; KEGG: sbm:Shew185_2174 phage integrase family protein; integrase family protein 2685669 5662604 Spea_2211 Shewanella pealeana ATCC 700345 integrase family protein YP_001502066.1 2684377 R 398579 CDS YP_001502067.1 157962033 5662605 complement(2685777..2686034) 1 NC_009901.1 KEGG: spc:Sputcn32_1997 hypothetical protein; hypothetical protein 2686034 5662605 Spea_2212 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502067.1 2685777 R 398579 CDS YP_001502068.1 157962034 5662606 complement(2686237..2686734) 1 NC_009901.1 KEGG: sfr:Sfri_2009 hypothetical protein; hypothetical protein 2686734 5662606 Spea_2213 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502068.1 2686237 R 398579 CDS YP_001502069.1 157962035 5662607 2686963..2688399 1 NC_009901.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 2688399 5662607 Spea_2214 Shewanella pealeana ATCC 700345 cbb3-type cytochrome c oxidase subunit I YP_001502069.1 2686963 D 398579 CDS YP_001502070.1 157962036 5662608 2688412..2689026 1 NC_009901.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 2689026 5662608 Spea_2215 Shewanella pealeana ATCC 700345 cbb3-type cytochrome c oxidase subunit II YP_001502070.1 2688412 D 398579 CDS YP_001502071.1 157962037 5662609 2689038..2689214 1 NC_009901.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: sdn:Sden_1849 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 2689214 5662609 Spea_2216 Shewanella pealeana ATCC 700345 cbb3-type cytochrome oxidase subunit YP_001502071.1 2689038 D 398579 CDS YP_001502072.1 157962038 5662610 2689214..2690170 1 NC_009901.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c class I; KEGG: sbl:Sbal_4490 hypothetical protein; cytochrome c oxidase, cbb3-type subunit III 2690170 5662610 Spea_2217 Shewanella pealeana ATCC 700345 cytochrome c oxidase, cbb3-type subunit III YP_001502072.1 2689214 D 398579 CDS YP_001502073.1 157962039 5662611 2690320..2690799 1 NC_009901.1 KEGG: slo:Shew_1989 hypothetical protein; hypothetical protein 2690799 5662611 Spea_2218 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502073.1 2690320 D 398579 CDS YP_001502074.1 157962040 5662612 2690867..2693251 1 NC_009901.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: shn:Shewana3_2112 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2693251 5662612 Spea_2219 Shewanella pealeana ATCC 700345 heavy metal translocating P-type ATPase YP_001502074.1 2690867 D 398579 CDS YP_001502075.1 157962041 5662613 2693248..2693457 1 NC_009901.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: sfr:Sfri_2016 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 2693457 5662613 Spea_2220 Shewanella pealeana ATCC 700345 cbb3-type cytochrome oxidase maturation protein YP_001502075.1 2693248 D 398579 CDS YP_001502076.1 157962042 5662614 2693454..2694146 1 NC_009901.1 KEGG: sbl:Sbal_4494 hypothetical protein; hypothetical protein 2694146 5662614 Spea_2221 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502076.1 2693454 D 398579 CDS YP_001502077.1 157962043 5662615 2694204..2694956 1 NC_009901.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2694956 5662615 Spea_2222 Shewanella pealeana ATCC 700345 fumarate/nitrate reduction transcriptional regulator YP_001502077.1 2694204 D 398579 CDS YP_001502078.1 157962044 5662616 2695050..2695982 1 NC_009901.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2695982 5662616 Spea_2223 Shewanella pealeana ATCC 700345 universal stress protein UspE YP_001502078.1 2695050 D 398579 CDS YP_001502079.1 157962045 5662617 2696062..2696997 1 NC_009901.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2696997 5662617 Spea_2224 Shewanella pealeana ATCC 700345 C32 tRNA thiolase YP_001502079.1 2696062 D 398579 CDS YP_001502080.1 157962046 5662618 complement(2697073..2697696) 1 NC_009901.1 KEGG: slo:Shew_1996 hypothetical protein; hypothetical protein 2697696 5662618 Spea_2225 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502080.1 2697073 R 398579 CDS YP_001502081.1 157962047 5662619 complement(2697674..2698501) 1 NC_009901.1 KEGG: slo:Shew_1997 Bax protein, putative; Bax protein 2698501 5662619 Spea_2226 Shewanella pealeana ATCC 700345 Bax protein YP_001502081.1 2697674 R 398579 CDS YP_001502082.1 157962048 5662620 2698664..2699575 1 NC_009901.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: slo:Shew_1998 protein of unknown function UPF0052 and CofD; hypothetical protein 2699575 5662620 Spea_2227 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502082.1 2698664 D 398579 CDS YP_001502083.1 157962049 5662621 complement(2699690..2700883) 1 NC_009901.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2700883 5662621 Spea_2228 Shewanella pealeana ATCC 700345 aromatic amino acid aminotransferase YP_001502083.1 2699690 R 398579 CDS YP_001502084.1 157962050 5662622 complement(2701154..2702440) 1 NC_009901.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2702440 5662622 Spea_2229 Shewanella pealeana ATCC 700345 seryl-tRNA synthetase YP_001502084.1 2701154 R 398579 CDS YP_001502085.1 157962051 5662623 complement(2702459..2702833) 1 NC_009901.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2702833 5662623 Spea_2230 Shewanella pealeana ATCC 700345 camphor resistance protein CrcB YP_001502085.1 2702459 R 398579 CDS YP_001502086.1 157962052 5662624 complement(2702826..2704157) 1 NC_009901.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: slo:Shew_2022 AAA ATPase, central domain protein; recombination factor protein RarA 2704157 5662624 Spea_2231 Shewanella pealeana ATCC 700345 recombination factor protein RarA YP_001502086.1 2702826 R 398579 CDS YP_001502087.1 157962053 5662625 complement(2704167..2704793) 1 NC_009901.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: shn:Shewana3_2051 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 2704793 5662625 Spea_2232 Shewanella pealeana ATCC 700345 outer membrane lipoprotein carrier protein LolA YP_001502087.1 2704167 R 398579 CDS YP_001502088.1 157962054 5662626 complement(2704860..2707409) 1 NC_009901.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: slo:Shew_2024 cell divisionFtsK/SpoIIIE; cell division protein FtsK 2707409 5662626 Spea_2233 Shewanella pealeana ATCC 700345 cell division protein FtsK YP_001502088.1 2704860 R 398579 CDS YP_001502089.1 157962055 5662627 complement(2707600..2708103) 1 NC_009901.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 2708103 5662627 Spea_2234 Shewanella pealeana ATCC 700345 leucine-responsive transcriptional regulator YP_001502089.1 2707600 R 398579 CDS YP_001502090.1 157962056 5662628 2708284..2709399 1 NC_009901.1 TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: slo:Shew_2026 alanine dehydrogenase; alanine dehydrogenase 2709399 5662628 Spea_2235 Shewanella pealeana ATCC 700345 alanine dehydrogenase YP_001502090.1 2708284 D 398579 CDS YP_001502091.1 157962057 5662629 complement(2709460..2710143) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO_2426 DNA-binding response regulator; two component transcriptional regulator 2710143 5662629 Spea_2236 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001502091.1 2709460 R 398579 CDS YP_001502092.1 157962058 5662630 complement(2710313..2712085) 1 NC_009901.1 PFAM: protein of unknown function DUF885; KEGG: sbm:Shew185_2005 protein of unknown function DUF885; hypothetical protein 2712085 5662630 Spea_2237 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502092.1 2710313 R 398579 CDS YP_001502093.1 157962059 5662631 complement(2712235..2714160) 1 NC_009901.1 KEGG: pin:Ping_3396 23S rRNA (Gm2251)-methyltransferase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 2714160 5662631 Spea_2238 Shewanella pealeana ATCC 700345 ATP-dependent DNA helicase RecQ YP_001502093.1 2712235 R 398579 CDS YP_001502094.1 157962060 5662632 complement(2714229..2715110) 1 NC_009901.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: slo:Shew_1933 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 2715110 5662632 Spea_2239 Shewanella pealeana ATCC 700345 endonuclease/exonuclease/phosphatase YP_001502094.1 2714229 R 398579 CDS YP_001502095.1 157962061 5662633 2715271..2716728 1 NC_009901.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2716728 cls 5662633 cls Shewanella pealeana ATCC 700345 cardiolipin synthetase YP_001502095.1 2715271 D 398579 CDS YP_001502096.1 157962062 5662634 2716796..2717467 1 NC_009901.1 KEGG: she:Shewmr4_3608 hypothetical protein; hypothetical protein 2717467 5662634 Spea_2241 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502096.1 2716796 D 398579 CDS YP_001502097.1 157962063 5664757 complement(2717834..2719828) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: sbm:Shew185_1950 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2719828 5664757 Spea_2242 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001502097.1 2717834 R 398579 CDS YP_001502098.1 157962064 5662636 complement(2720017..2721084) 1 NC_009901.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2721084 5662636 Spea_2243 Shewanella pealeana ATCC 700345 quinolinate synthetase YP_001502098.1 2720017 R 398579 CDS YP_001502099.1 157962065 5662637 complement(2721214..2722836) 1 NC_009901.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sbm:Shew185_2151 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase; dihydrolipoamide acetyltransferase 2722836 5662637 Spea_2244 Shewanella pealeana ATCC 700345 dihydrolipoamide acetyltransferase YP_001502099.1 2721214 R 398579 CDS YP_001502100.1 157962066 5662638 complement(2722846..2723823) 1 NC_009901.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: sbl:Sbal_4507 hypothetical protein; transketolase central region 2723823 5662638 Spea_2245 Shewanella pealeana ATCC 700345 transketolase central region YP_001502100.1 2722846 R 398579 CDS YP_001502101.1 157962067 5662639 complement(2723827..2725005) 1 NC_009901.1 PFAM: dehydrogenase E1 component; KEGG: slo:Shew_1925 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); 3-methyl-2-oxobutanoate dehydrogenase 2725005 5662639 Spea_2246 Shewanella pealeana ATCC 700345 3-methyl-2-oxobutanoate dehydrogenase YP_001502101.1 2723827 R 398579 CDS YP_001502102.1 157962068 5662640 complement(2725188..2726225) 1 NC_009901.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2726225 5662640 Spea_2247 Shewanella pealeana ATCC 700345 succinylglutamate desuccinylase YP_001502102.1 2725188 R 398579 CDS YP_001502103.1 157962069 5662641 2726486..2726965 1 NC_009901.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: sfr:Sfri_1933 peptide methionine sulfoxide reductase; peptide methionine sulfoxide reductase 2726965 5662641 Spea_2248 Shewanella pealeana ATCC 700345 peptide methionine sulfoxide reductase YP_001502103.1 2726486 D 398579 CDS YP_001502104.1 157962070 5662642 complement(2727127..2727570) 1 NC_009901.1 KEGG: sfr:Sfri_2052 hypothetical protein; hypothetical protein 2727570 5662642 Spea_2249 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502104.1 2727127 R 398579 CDS YP_001502105.1 157962071 5662643 2728173..2728463 1 NC_009901.1 hypothetical protein 2728463 5662643 Spea_2250 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502105.1 2728173 D 398579 CDS YP_001502106.1 157962072 5662644 complement(2729423..2729785) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: vfi:VF1977 protein YgiW precursor; hypothetical protein 2729785 5662644 Spea_2251 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502106.1 2729423 R 398579 CDS YP_001502107.1 157962073 5662645 complement(2730078..2732093) 1 NC_009901.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfr:Sfri_2144 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2732093 5662645 Spea_2252 Shewanella pealeana ATCC 700345 NADH:flavin oxidoreductase YP_001502107.1 2730078 R 398579 CDS YP_001502108.1 157962074 5662646 2732249..2734090 1 NC_009901.1 KEGG: slo:Shew_1941 signal peptide peptidase SppA, 67K type; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; signal peptide peptidase SppA 2734090 5662646 Spea_2253 Shewanella pealeana ATCC 700345 signal peptide peptidase SppA YP_001502108.1 2732249 D 398579 CDS YP_001502109.1 157962075 5662647 2734394..2735410 1 NC_009901.1 converts asparagine to aspartate and ammonia; asparaginase 2735410 ansA 5662647 ansA Shewanella pealeana ATCC 700345 asparaginase YP_001502109.1 2734394 D 398579 CDS YP_001502110.1 157962076 5662648 complement(2735760..2736041) 1 NC_009901.1 PFAM: protein of unknown function DUF1315; KEGG: slo:Shew_1939 protein of unknown function DUF1315; hypothetical protein 2736041 5662648 Spea_2255 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502110.1 2735760 R 398579 CDS YP_001502111.1 157962077 5662649 complement(2736038..2736355) 1 NC_009901.1 KEGG: slo:Shew_1938 hypothetical protein; hypothetical protein 2736355 5662649 Spea_2256 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502111.1 2736038 R 398579 CDS YP_001502112.1 157962078 5662650 complement(2736417..2737544) 1 NC_009901.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: slo:Shew_1937 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 2737544 5662650 Spea_2257 Shewanella pealeana ATCC 700345 peptidase M14 carboxypeptidase A YP_001502112.1 2736417 R 398579 CDS YP_001502113.1 157962079 5662651 2737834..2738784 1 NC_009901.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slo:Shew_2028 thioredoxin reductase; thioredoxin reductase 2738784 5662651 Spea_2258 Shewanella pealeana ATCC 700345 thioredoxin reductase YP_001502113.1 2737834 D 398579 CDS YP_001502114.1 157962080 5662652 complement(2738883..2739491) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1712 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2739491 5662652 Spea_2259 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502114.1 2738883 R 398579 CDS YP_001502115.1 157962081 5662653 complement(2739653..2740012) 1 NC_009901.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2740012 rplT 5662653 rplT Shewanella pealeana ATCC 700345 50S ribosomal protein L20 YP_001502115.1 2739653 R 398579 CDS YP_001502116.1 157962082 5662654 complement(2740031..2740225) 1 NC_009901.1 PFAM: ribosomal protein L35; KEGG: slo:Shew_2030 ribosomal protein L35; 50S ribosomal protein L35 2740225 rpmI 5662654 rpmI Shewanella pealeana ATCC 700345 50S ribosomal protein L35 YP_001502116.1 2740031 R 398579 CDS YP_001502117.1 157962083 5662655 complement(2740313..2740789) 1 NC_009901.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: slo:Shew_2031 translation initiation factor IF-3; translation initiation factor IF-3 2740789 5662655 Spea_2262 Shewanella pealeana ATCC 700345 translation initiation factor IF-3 YP_001502117.1 2740313 R 398579 CDS YP_001502118.1 157962084 5662656 complement(2740859..2742787) 1 NC_009901.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2742787 5662656 Spea_2263 Shewanella pealeana ATCC 700345 threonyl-tRNA synthetase YP_001502118.1 2740859 R 398579 CDS YP_001502119.1 157962085 5662657 2743074..2743340 1 NC_009901.1 hypothetical protein 2743340 5662657 Spea_2264 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502119.1 2743074 D 398579 CDS YP_001502120.1 157962086 5662658 2743471..2744208 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: saz:Sama_1764 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2744208 5662658 Spea_2265 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001502120.1 2743471 D 398579 CDS YP_001502121.1 157962087 5662659 2744211..2744411 1 NC_009901.1 KEGG: shn:Shewana3_2041 hypothetical protein; hypothetical protein 2744411 5662659 Spea_2266 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502121.1 2744211 D 398579 CDS YP_001502122.1 157962088 5662660 complement(2744451..2745068) 1 NC_009901.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2745068 5662660 Spea_2267 Shewanella pealeana ATCC 700345 riboflavin synthase subunit alpha YP_001502122.1 2744451 R 398579 CDS YP_001502123.1 157962089 5662661 2745103..2746461 1 NC_009901.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: slo:Shew_2037 MATE efflux family protein; MATE efflux family protein 2746461 5662661 Spea_2268 Shewanella pealeana ATCC 700345 MATE efflux family protein YP_001502123.1 2745103 D 398579 CDS YP_001502124.1 157962090 5662662 2746572..2746706 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 2746706 5662662 Spea_2269 Shewanella pealeana ATCC 700345 transposase YP_001502124.1 2746572 D 398579 CDS YP_001502125.1 157962091 5662663 2746961..2747440 1 NC_009901.1 PFAM: PEBP family protein; KEGG: aeh:Mlg_1616 YbhB and YbcL; PEBP family protein 2747440 5662663 Spea_2270 Shewanella pealeana ATCC 700345 PEBP family protein YP_001502125.1 2746961 D 398579 CDS YP_001502126.1 157962092 5662664 complement(2747821..2749002) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE3963 conserved integral membrane protein; hypothetical protein 2749002 5662664 Spea_2271 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502126.1 2747821 R 398579 CDS YP_001502127.1 157962093 5662665 complement(2749502..2751547) 1 NC_009901.1 PFAM: pentapeptide repeat protein; KEGG: vpa:VPA1301 hypothetical protein; pentapeptide repeat-containing protein 2751547 5662665 Spea_2272 Shewanella pealeana ATCC 700345 pentapeptide repeat-containing protein YP_001502127.1 2749502 R 398579 CDS YP_001502128.1 157962094 5662666 complement(2752263..2752703) 1 NC_009901.1 hypothetical protein 2752703 5662666 Spea_2273 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502128.1 2752263 R 398579 CDS YP_001502129.1 157962095 5662667 complement(2752832..2753257) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vha:VIBHAR_05434 hypothetical protein; N-acetyltransferase GCN5 2753257 5662667 Spea_2274 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502129.1 2752832 R 398579 CDS YP_001502130.1 157962096 5662668 complement(2753371..2754312) 1 NC_009901.1 KEGG: sdn:Sden_1029 hypothetical protein; hypothetical protein 2754312 5662668 Spea_2275 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502130.1 2753371 R 398579 CDS YP_001502131.1 157962097 5662669 2755175..2757103 1 NC_009901.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sdn:Sden_1155 radical SAM; radical SAM domain-containing protein 2757103 5662669 Spea_2276 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001502131.1 2755175 D 398579 CDS YP_001502132.1 157962098 5662670 complement(2757455..2758465) 1 NC_009901.1 PFAM: peptidase S15; KEGG: sde:Sde_2300 dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like; peptidase S15 2758465 5662670 Spea_2277 Shewanella pealeana ATCC 700345 peptidase S15 YP_001502132.1 2757455 R 398579 CDS YP_001502133.1 157962099 5662671 complement(2758794..2759069) 1 NC_009901.1 hypothetical protein 2759069 5662671 Spea_2278 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502133.1 2758794 R 398579 CDS YP_001502134.1 157962100 5664763 complement(2760829..2762043) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: vfi:VFA0067 oxalate/formate antiporter; major facilitator transporter 2762043 5664763 Spea_2279 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001502134.1 2760829 R 398579 CDS YP_001502135.1 157962101 5662673 complement(2762438..2762935) 1 NC_009901.1 KEGG: sfr:Sfri_0770 hypothetical protein; hypothetical protein 2762935 5662673 Spea_2280 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502135.1 2762438 R 398579 CDS YP_001502136.1 157962102 5662674 2763350..2763874 1 NC_009901.1 KEGG: bld:BLi00510 YdaE; hypothetical protein 2763874 5662674 Spea_2281 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502136.1 2763350 D 398579 CDS YP_001502137.1 157962103 5662675 complement(2763910..2764911) 1 NC_009901.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rru:Rru_A0247 periplasmic binding protein/LacI transcriptional regulator; periplasmic-binding protein/LacI transcriptional regulator 2764911 5662675 Spea_2282 Shewanella pealeana ATCC 700345 periplasmic-binding protein/LacI transcriptional regulator YP_001502137.1 2763910 R 398579 CDS YP_001502138.1 157962104 5662676 complement(2764984..2766021) 1 NC_009901.1 PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0911 ribose ABC transporter, permease protein; monosaccharide-transporting ATPase 2766021 5662676 Spea_2283 Shewanella pealeana ATCC 700345 monosaccharide-transporting ATPase YP_001502138.1 2764984 R 398579 CDS YP_001502139.1 157962105 5662677 complement(2766032..2767516) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgl:SG0612 sugar ABC transporter ATP-binding component; ABC transporter-like protein 2767516 5662677 Spea_2284 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001502139.1 2766032 R 398579 CDS YP_001502140.1 157962106 5662678 complement(2767509..2769026) 1 NC_009901.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: mmw:Mmwyl1_1989 xylulokinase; xylulokinase 2769026 5662678 Spea_2285 Shewanella pealeana ATCC 700345 xylulokinase YP_001502140.1 2767509 R 398579 CDS YP_001502141.1 157962107 5662679 complement(2769030..2770064) 1 NC_009901.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: plu:plu1960 hypothetical protein; alcohol dehydrogenase 2770064 5662679 Spea_2286 Shewanella pealeana ATCC 700345 alcohol dehydrogenase YP_001502141.1 2769030 R 398579 CDS YP_001502142.1 157962108 5662680 2770396..2771385 1 NC_009901.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: hch:HCH_02466 transcriptional regulator; LacI family transcriptional regulator 2771385 5662680 Spea_2287 Shewanella pealeana ATCC 700345 LacI family transcriptional regulator YP_001502142.1 2770396 D 398579 CDS YP_001502143.1 157962109 5662681 2771705..2773315 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRA1657 putative Uup, ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter-like protein 2773315 5662681 Spea_2288 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001502143.1 2771705 D 398579 CDS YP_001502144.1 157962110 5662682 complement(2773448..2774098) 1 NC_009901.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: vha:VIBHAR_07054 hypothetical protein; hexapaptide repeat-containing transferase 2774098 5662682 Spea_2289 Shewanella pealeana ATCC 700345 hexapaptide repeat-containing transferase YP_001502144.1 2773448 R 398579 CDS YP_001502145.1 157962111 5662683 complement(2774152..2775009) 1 NC_009901.1 PFAM: phospholipase A1; KEGG: vha:VIBHAR_02841 hypothetical protein; phospholipase A1 2775009 5662683 Spea_2290 Shewanella pealeana ATCC 700345 phospholipase A1 YP_001502145.1 2774152 R 398579 CDS YP_001502146.1 157962112 5662684 complement(2775396..2777381) 1 NC_009901.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2777381 5662684 Spea_2291 Shewanella pealeana ATCC 700345 excinuclease ABC subunit B YP_001502146.1 2775396 R 398579 CDS YP_001502147.1 157962113 5662685 complement(2777679..2780669) 1 NC_009901.1 PFAM: UvrD/REP helicase; DNA topoisomerase type IA zn finger domain protein; KEGG: sfr:Sfri_0452 UvrD/REP helicase; UvrD/REP helicase 2780669 5662685 Spea_2292 Shewanella pealeana ATCC 700345 UvrD/REP helicase YP_001502147.1 2777679 R 398579 CDS YP_001502148.1 157962114 5662686 2781046..2781396 1 NC_009901.1 hypothetical protein 2781396 5662686 Spea_2293 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502148.1 2781046 D 398579 CDS YP_001502149.1 157962115 5662687 2781639..2782721 1 NC_009901.1 PFAM: protein of unknown function UPF0118; KEGG: vfi:VF2136 hypothetical membrane spanning protein; hypothetical protein 2782721 5662687 Spea_2294 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502149.1 2781639 D 398579 CDS YP_001502150.1 157962116 5662688 2782955..2784538 1 NC_009901.1 PFAM: glutathione synthase; glutathione synthase ATP-binding; KEGG: shn:Shewana3_2339 glutathione synthase, ATP-binding; glutathione synthase 2784538 5662688 Spea_2295 Shewanella pealeana ATCC 700345 glutathione synthase YP_001502150.1 2782955 D 398579 CDS YP_001502151.1 157962117 5662689 complement(2784744..2787185) 1 NC_009901.1 KEGG: saz:Sama_1875 hypothetical protein; hypothetical protein 2787185 5662689 Spea_2296 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502151.1 2784744 R 398579 CDS YP_001502152.1 157962118 5662690 complement(2787185..2787814) 1 NC_009901.1 KEGG: saz:Sama_1874 hypothetical protein; hypothetical protein 2787814 5662690 Spea_2297 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502152.1 2787185 R 398579 CDS YP_001502153.1 157962119 5662691 2787978..2791259 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; Two component regulator propeller; histidine kinase dimerisation and phosphoacceptor region; KEGG: saz:Sama_1872 sensor histidine kinase; histidine kinase 2791259 5662691 Spea_2298 Shewanella pealeana ATCC 700345 histidine kinase YP_001502153.1 2787978 D 398579 CDS YP_001502154.1 157962120 5662692 2791252..2791917 1 NC_009901.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: saz:Sama_1873 response regulator receiver protein; two component LuxR family transcriptional regulator 2791917 5662692 Spea_2299 Shewanella pealeana ATCC 700345 two component LuxR family transcriptional regulator YP_001502154.1 2791252 D 398579 CDS YP_001502155.1 157962121 5662693 2792348..2794168 1 NC_009901.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: saz:Sama_1876 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 2794168 5662693 Spea_2300 Shewanella pealeana ATCC 700345 peptidase S8/S53 subtilisin kexin sedolisin YP_001502155.1 2792348 D 398579 CDS YP_001502156.1 157962122 5662694 complement(2794293..2795201) 1 NC_009901.1 KEGG: ppr:PBPRB0896 hypothetical protein; hypothetical protein 2795201 5662694 Spea_2301 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502156.1 2794293 R 398579 CDS YP_001502157.1 157962123 5662695 2795304..2795882 1 NC_009901.1 KEGG: sfr:Sfri_2082 hypothetical protein; hypothetical protein 2795882 5662695 Spea_2302 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502157.1 2795304 D 398579 CDS YP_001502158.1 157962124 5662696 2796192..2798228 1 NC_009901.1 KEGG: sfr:Sfri_2083 hypothetical protein; hypothetical protein 2798228 5662696 Spea_2303 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502158.1 2796192 D 398579 CDS YP_001502159.1 157962125 5662697 2798257..2799402 1 NC_009901.1 KEGG: rrs:RoseRS_0345 hypothetical protein; hypothetical protein 2799402 5662697 Spea_2304 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502159.1 2798257 D 398579 CDS YP_001502160.1 157962126 5662698 2799563..2800672 1 NC_009901.1 KEGG: ent:Ent638_0472 hypothetical protein; hypothetical protein 2800672 5662698 Spea_2305 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502160.1 2799563 D 398579 CDS YP_001502161.1 157962127 5662699 2800665..2802431 1 NC_009901.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: ent:Ent638_0471 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PapS reductase)/FAD synthetase and related enzyme; hypothetical protein 2802431 5662699 Spea_2306 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502161.1 2800665 D 398579 CDS YP_001502162.1 157962128 5662700 2802433..2804463 1 NC_009901.1 PFAM: SMC domain protein; KEGG: ent:Ent638_0470 SMC domain protein; SMC domain-containing protein 2804463 5662700 Spea_2307 Shewanella pealeana ATCC 700345 SMC domain-containing protein YP_001502162.1 2802433 D 398579 CDS YP_001502163.1 157962129 5662701 2804463..2804831 1 NC_009901.1 PFAM: Domain of unknown function DUF1832; KEGG: ent:Ent638_0469 hypothetical protein; hypothetical protein 2804831 5662701 Spea_2308 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502163.1 2804463 D 398579 CDS YP_001502164.1 157962130 5662702 complement(2804938..2807730) 1 NC_009901.1 PFAM: sigma-70 region 4 domain protein; KEGG: fal:FRAAL2026 RNA polymerase essential primary sigma 70 factor; sigma-70 region 4 domain-containing protein 2807730 5662702 Spea_2309 Shewanella pealeana ATCC 700345 sigma-70 region 4 domain-containing protein YP_001502164.1 2804938 R 398579 CDS YP_001502165.1 157962131 5662703 complement(2807742..2808128) 1 NC_009901.1 hypothetical protein 2808128 5662703 Spea_2310 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502165.1 2807742 R 398579 CDS YP_001502166.1 157962132 5662704 complement(2808131..2809195) 1 NC_009901.1 KEGG: mbu:Mbur_1538 ATPase involved in DNA repair-like protein; hypothetical protein 2809195 5662704 Spea_2311 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502166.1 2808131 R 398579 CDS YP_001502167.1 157962133 5662705 complement(2809332..2810114) 1 NC_009901.1 KEGG: hwa:HQ2075A predicted ATPase invovled in DNA repair; hypothetical protein 2810114 5662705 Spea_2312 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502167.1 2809332 R 398579 CDS YP_001502168.1 157962134 5662706 complement(2810301..2812421) 1 NC_009901.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: gur:Gura_2481 type III restriction enzyme, res subunit; type III restriction protein res subunit 2812421 5662706 Spea_2313 Shewanella pealeana ATCC 700345 type III restriction protein res subunit YP_001502168.1 2810301 R 398579 CDS YP_001502169.1 157962135 5662707 complement(2812791..2813660) 1 NC_009901.1 SMART: HNH nuclease; KEGG: plu:plu4325 hypothetical protein; HNH nuclease 2813660 5662707 Spea_2314 Shewanella pealeana ATCC 700345 HNH nuclease YP_001502169.1 2812791 R 398579 CDS YP_001502170.1 157962136 5662708 complement(2813885..2819116) 1 NC_009901.1 KEGG: ent:Ent638_0466 hypothetical protein; hypothetical protein 2819116 5662708 Spea_2315 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502170.1 2813885 R 398579 CDS YP_001502171.1 157962137 5662709 complement(2819088..2820437) 1 NC_009901.1 KEGG: pha:PSHAb0090 putative orphan protein; putative orphan protein 2820437 5662709 Spea_2316 Shewanella pealeana ATCC 700345 putative orphan protein YP_001502171.1 2819088 R 398579 CDS YP_001502172.1 157962138 5662710 complement(2820440..2822035) 1 NC_009901.1 KEGG: pha:PSHAb0089 hypothetical protein; hypothetical protein 2822035 5662710 Spea_2317 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502172.1 2820440 R 398579 CDS YP_001502173.1 157962139 5662711 complement(2822648..2822950) 1 NC_009901.1 PFAM: protein of unknown function UPF0153; KEGG: cps:CPS_2552 hypothetical protein; hypothetical protein 2822950 5662711 Spea_2318 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502173.1 2822648 R 398579 CDS YP_001502174.1 157962140 5662712 complement(2823102..2824382) 1 NC_009901.1 TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: sfr:Sfri_1860 putative AcnD-accessory protein PrpF; putative AcnD-accessory protein PrpF 2824382 5662712 Spea_2319 Shewanella pealeana ATCC 700345 putative AcnD-accessory protein PrpF YP_001502174.1 2823102 R 398579 CDS YP_001502175.1 157962141 5662713 complement(2824628..2827267) 1 NC_009901.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2827267 5662713 Spea_2320 Shewanella pealeana ATCC 700345 aconitate hydratase YP_001502175.1 2824628 R 398579 CDS YP_001502176.1 157962142 5662714 complement(2827508..2828662) 1 NC_009901.1 KEGG: slo:Shew_1821 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; 2-methylcitrate synthase/citrate synthase II 2828662 5662714 Spea_2321 Shewanella pealeana ATCC 700345 2-methylcitrate synthase/citrate synthase II YP_001502176.1 2827508 R 398579 CDS YP_001502177.1 157962143 5662715 complement(2828831..2829709) 1 NC_009901.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 2829709 prpB 5662715 prpB Shewanella pealeana ATCC 700345 2-methylisocitrate lyase YP_001502177.1 2828831 R 398579 CDS YP_001502178.1 157962144 5662716 complement(2829873..2830535) 1 NC_009901.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pat:Patl_1418 transcriptional regulator, GntR family; GntR family transcriptional regulator 2830535 5662716 Spea_2323 Shewanella pealeana ATCC 700345 GntR family transcriptional regulator YP_001502178.1 2829873 R 398579 CDS YP_001502179.1 157962145 5662717 2830886..2833582 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: shm:Shewmr7_1876 CoA-binding domain protein; N-acetyltransferase GCN5 2833582 5662717 Spea_2324 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502179.1 2830886 D 398579 CDS YP_001502180.1 157962146 5662718 complement(2833701..2834753) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_2040 diguanylate cyclase; diguanylate cyclase 2834753 5662718 Spea_2325 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502180.1 2833701 R 398579 CDS YP_001502181.1 157962147 5662719 complement(2834856..2836499) 1 NC_009901.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: slo:Shew_2041 protein of unknown function DUF1705; sulfatase 2836499 5662719 Spea_2326 Shewanella pealeana ATCC 700345 sulfatase YP_001502181.1 2834856 R 398579 CDS YP_001502182.1 157962148 5662720 complement(2836841..2837260) 1 NC_009901.1 PFAM: regulatory protein MarR; KEGG: sbm:Shew185_2256 transcriptional regulator, MarR family; MarR family transcriptional regulator 2837260 5662720 Spea_2327 Shewanella pealeana ATCC 700345 MarR family transcriptional regulator YP_001502182.1 2836841 R 398579 CDS YP_001502183.1 157962149 5662721 complement(2837287..2838264) 1 NC_009901.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: slo:Shew_2043 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2838264 5662721 Spea_2328 Shewanella pealeana ATCC 700345 cation diffusion facilitator family transporter YP_001502183.1 2837287 R 398579 CDS YP_001502184.1 157962150 5662722 2838728..2839309 1 NC_009901.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 2839309 5662722 Spea_2329 Shewanella pealeana ATCC 700345 ecotin YP_001502184.1 2838728 D 398579 CDS YP_001502185.1 157962151 5662723 complement(2839363..2840091) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 2840091 5662723 Spea_2330 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001502185.1 2839363 R 398579 CDS YP_001502186.1 157962152 5662724 complement(2840208..2840591) 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 2840591 5662724 Spea_2331 Shewanella pealeana ATCC 700345 transposase YP_001502186.1 2840208 R 398579 CDS YP_001502187.1 157962153 5662725 complement(2840688..2841335) 1 NC_009901.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2841335 5662725 Spea_2332 Shewanella pealeana ATCC 700345 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001502187.1 2840688 R 398579 CDS YP_001502188.1 157962154 5662726 complement(2841357..2843183) 1 NC_009901.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 2843183 5662726 Spea_2333 Shewanella pealeana ATCC 700345 phosphogluconate dehydratase YP_001502188.1 2841357 R 398579 CDS YP_001502189.1 157962155 5662727 complement(2843193..2843897) 1 NC_009901.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: slo:Shew_2047 6-phosphogluconolactonase; 6-phosphogluconolactonase 2843897 5662727 Spea_2334 Shewanella pealeana ATCC 700345 6-phosphogluconolactonase YP_001502189.1 2843193 R 398579 CDS YP_001502190.1 157962156 5662728 complement(2843908..2845404) 1 NC_009901.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2845404 5662728 Spea_2335 Shewanella pealeana ATCC 700345 glucose-6-phosphate 1-dehydrogenase YP_001502190.1 2843908 R 398579 CDS YP_001502191.1 157962157 5662729 2845696..2846550 1 NC_009901.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2846550 5662729 Spea_2336 Shewanella pealeana ATCC 700345 DNA-binding transcriptional regulator HexR YP_001502191.1 2845696 D 398579 CDS YP_001502192.1 157962158 5662730 2846735..2848171 1 NC_009901.1 KEGG: slo:Shew_2050 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 2848171 5662730 Spea_2337 Shewanella pealeana ATCC 700345 pyruvate kinase YP_001502192.1 2846735 D 398579 CDS YP_001502193.1 157962159 5662731 complement(2848256..2850538) 1 NC_009901.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2850538 5662731 Spea_2338 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase YP_001502193.1 2848256 R 398579 CDS YP_001502194.1 157962160 5662732 complement(2850544..2851191) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_2052 transcriptional regulator, TetR family; TetR family transcriptional regulator 2851191 5662732 Spea_2339 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001502194.1 2850544 R 398579 CDS YP_001502195.1 157962161 5662733 2851374..2853212 1 NC_009901.1 PFAM: peptidase M2 peptidyl-dipeptidase A; KEGG: slo:Shew_2053 peptidyl-dipeptidase A; peptidyl-dipeptidase A 2853212 5662733 Spea_2340 Shewanella pealeana ATCC 700345 peptidyl-dipeptidase A YP_001502195.1 2851374 D 398579 CDS YP_001502196.1 157962162 5662734 complement(2853331..2853921) 1 NC_009901.1 PFAM: Smr protein/MutS2; KEGG: she:Shewmr4_2052 Smr protein/MutS2; Smr protein/MutS2 2853921 5662734 Spea_2341 Shewanella pealeana ATCC 700345 Smr protein/MutS2 YP_001502196.1 2853331 R 398579 CDS YP_001502197.1 157962163 5662735 2854089..2854673 1 NC_009901.1 KEGG: slo:Shew_2055 hypothetical protein; hypothetical protein 2854673 5662735 Spea_2342 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502197.1 2854089 D 398579 CDS YP_001502198.1 157962164 5662736 2854760..2855239 1 NC_009901.1 PFAM: SEC-C motif domain protein; KEGG: sfr:Sfri_1884 sec-C motif domain protein; SecC motif-containing protein 2855239 5662736 Spea_2343 Shewanella pealeana ATCC 700345 SecC motif-containing protein YP_001502198.1 2854760 D 398579 CDS YP_001502199.1 157962165 5662737 complement(2855384..2857558) 1 NC_009901.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: slo:Shew_2057 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PAS/PAC and GAF sensor(s)-containing diguanylate cyclase/phosphodiesterase 2857558 5662737 Spea_2344 Shewanella pealeana ATCC 700345 PAS/PAC and GAF sensor(s)-containing diguanylate cyclase/phosphodiesterase YP_001502199.1 2855384 R 398579 CDS YP_001502200.1 157962166 5662738 complement(2857686..2857973) 1 NC_009901.1 KEGG: slo:Shew_2058 hypothetical protein; hypothetical protein 2857973 5662738 Spea_2345 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502200.1 2857686 R 398579 CDS YP_001502201.1 157962167 5662739 complement(2858049..2858600) 1 NC_009901.1 KEGG: shn:Shewana3_2162 hypothetical protein; hypothetical protein 2858600 5662739 Spea_2346 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502201.1 2858049 R 398579 CDS YP_001502202.1 157962168 5664768 2859892..2860968 1 NC_009901.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sbm:Shew185_2117 pyridoxal-5'-phosphate-dependent protein beta subunit; pyridoxal-5'-phosphate-dependent protein subunit beta 2860968 5664768 Spea_2347 Shewanella pealeana ATCC 700345 pyridoxal-5'-phosphate-dependent protein subunit beta YP_001502202.1 2859892 D 398579 CDS YP_001502203.1 157962169 5662741 complement(2861089..2861757) 1 NC_009901.1 PFAM: Radical SAM domain protein; KEGG: son:SO_2501 radical activating enzyme; radical SAM domain-containing protein 2861757 5662741 Spea_2348 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001502203.1 2861089 R 398579 CDS YP_001502204.1 157962170 5662742 2861885..2862568 1 NC_009901.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: sbl:Sbal_4541 hypothetical protein; exsB protein 2862568 5662742 Spea_2349 Shewanella pealeana ATCC 700345 exsB protein YP_001502204.1 2861885 D 398579 CDS YP_001502205.1 157962171 5662743 2862562..2863164 1 NC_009901.1 PFAM: Rhomboid family protein; KEGG: she:Shewmr4_2060 rhomboid family protein; rhomboid family protein 2863164 5662743 Spea_2350 Shewanella pealeana ATCC 700345 rhomboid family protein YP_001502205.1 2862562 D 398579 CDS YP_001502206.1 157962172 5662744 complement(2863253..2865256) 1 NC_009901.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2865256 5662744 Spea_2351 Shewanella pealeana ATCC 700345 excinuclease ABC subunit B YP_001502206.1 2863253 R 398579 CDS YP_001502207.1 157962173 5664775 2867204..2869120 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: sbl:Sbal_4544 hypothetical protein; diguanylate cyclase/phosphodiesterase 2869120 5664775 Spea_2352 Shewanella pealeana ATCC 700345 diguanylate cyclase/phosphodiesterase YP_001502207.1 2867204 D 398579 CDS YP_001502208.1 157962174 5662746 2869229..2869807 1 NC_009901.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: shm:Shewmr7_1911 electron transport complex, RnfABCDGE type, A subunit; Na(+)-translocating NADH-quinone reductase subunit E 2869807 5662746 Spea_2353 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit E YP_001502208.1 2869229 D 398579 CDS YP_001502209.1 157962175 5662747 2869810..2870379 1 NC_009901.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2870379 5662747 Spea_2354 Shewanella pealeana ATCC 700345 electron transport complex protein RnfB YP_001502209.1 2869810 D 398579 CDS YP_001502210.1 157962176 5662748 2870373..2872850 1 NC_009901.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 2872850 5662748 Spea_2355 Shewanella pealeana ATCC 700345 electron transport complex protein RnfC YP_001502210.1 2870373 D 398579 CDS YP_001502211.1 157962177 5662749 2872854..2873906 1 NC_009901.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 2873906 rnfD 5662749 rnfD Shewanella pealeana ATCC 700345 electron transport complex protein RnfD YP_001502211.1 2872854 D 398579 CDS YP_001502212.1 157962178 5662750 2873937..2874560 1 NC_009901.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2874560 5662750 Spea_2357 Shewanella pealeana ATCC 700345 electron transport complex protein RnfG YP_001502212.1 2873937 D 398579 CDS YP_001502213.1 157962179 5662751 2874557..2875252 1 NC_009901.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 2875252 5662751 Spea_2358 Shewanella pealeana ATCC 700345 electron transport complex protein RsxE YP_001502213.1 2874557 D 398579 CDS YP_001502214.1 157962180 5662752 2875294..2875935 1 NC_009901.1 KEGG: she:Shewmr4_2070 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 2875935 5662752 Spea_2359 Shewanella pealeana ATCC 700345 endonuclease III YP_001502214.1 2875294 D 398579 CDS YP_001502215.1 157962181 5662753 2876595..2877005 1 NC_009901.1 KEGG: shm:Shewmr7_1867 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 2877005 5662753 Spea_2360 Shewanella pealeana ATCC 700345 lactoylglutathione lyase YP_001502215.1 2876595 D 398579 CDS YP_001502216.1 157962182 5662754 complement(2877064..2879673) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_2074 TonB-dependent receptor; TonB-dependent receptor 2879673 5662754 Spea_2361 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001502216.1 2877064 R 398579 CDS YP_001502217.1 157962183 5662755 complement(2880551..2881564) 1 NC_009901.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2881564 ruvB 5662755 ruvB Shewanella pealeana ATCC 700345 Holliday junction DNA helicase RuvB YP_001502217.1 2880551 R 398579 CDS YP_001502218.1 157962184 5662756 complement(2881574..2882191) 1 NC_009901.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2882191 ruvA 5662756 ruvA Shewanella pealeana ATCC 700345 Holliday junction DNA helicase RuvA YP_001502218.1 2881574 R 398579 CDS YP_001502219.1 157962185 5662757 complement(2882188..2882709) 1 NC_009901.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2882709 ruvC 5662757 ruvC Shewanella pealeana ATCC 700345 Holliday junction resolvase YP_001502219.1 2882188 R 398579 CDS YP_001502220.1 157962186 5662758 complement(2882717..2883460) 1 NC_009901.1 PFAM: protein of unknown function DUF28; KEGG: slo:Shew_2078 protein of unknown function DUF28; hypothetical protein 2883460 5662758 Spea_2365 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502220.1 2882717 R 398579 CDS YP_001502221.1 157962187 5662759 complement(2883590..2885383) 1 NC_009901.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2885383 aspS 5662759 aspS Shewanella pealeana ATCC 700345 aspartyl-tRNA synthetase YP_001502221.1 2883590 R 398579 CDS YP_001502222.1 157962188 5662760 complement(2885554..2888325) 1 NC_009901.1 KEGG: shw:Sputw3181_2074 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; myoactive tetradecapeptide family protein; SMART: extracellular solute-binding protein family 3; diguanylate cyclase 2888325 5662760 Spea_2367 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502222.1 2885554 R 398579 CDS YP_001502223.1 157962189 5662761 2888514..2889245 1 NC_009901.1 TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: slo:Shew_2081 putative methyltransferase; putative methyltransferase 2889245 5662761 Spea_2368 Shewanella pealeana ATCC 700345 putative methyltransferase YP_001502223.1 2888514 D 398579 CDS YP_001502224.1 157962190 5662762 2889242..2890234 1 NC_009901.1 TIGRFAM: putative methyltransferase; PFAM: methyltransferase putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: sbm:Shew185_2310 putative methyltransferase; putative methyltransferase 2890234 5662762 Spea_2369 Shewanella pealeana ATCC 700345 putative methyltransferase YP_001502224.1 2889242 D 398579 CDS YP_001502225.1 157962191 5662763 2890258..2891013 1 NC_009901.1 PFAM: protein of unknown function DUF785; KEGG: slo:Shew_2083 protein of unknown function DUF785; hypothetical protein 2891013 5662763 Spea_2370 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502225.1 2890258 D 398579 CDS YP_001502226.1 157962192 5662764 2891025..2892533 1 NC_009901.1 KEGG: slo:Shew_2084 gonadoliberin III-related protein; gonadoliberin III-like protein 2892533 5662764 Spea_2371 Shewanella pealeana ATCC 700345 gonadoliberin III-like protein YP_001502226.1 2891025 D 398579 CDS YP_001502227.1 157962193 5662765 2892533..2893483 1 NC_009901.1 TIGRFAM: alpha-L-glutamate ligase-like protein; KEGG: slo:Shew_2085 alpha-L-glutamate ligase-like protein; alpha-L-glutamate ligase-like protein 2893483 5662765 Spea_2372 Shewanella pealeana ATCC 700345 alpha-L-glutamate ligase-like protein YP_001502227.1 2892533 D 398579 CDS YP_001502228.1 157962194 5662766 2893452..2895194 1 NC_009901.1 KEGG: spc:Sputcn32_1931 peptidase M3A and M3B, thimet/oligopeptidase F; peptidase M3A and M3B, thimet/oligopeptidase F 2895194 5662766 Spea_2373 Shewanella pealeana ATCC 700345 peptidase M3A and M3B, thimet/oligopeptidase F YP_001502228.1 2893452 D 398579 CDS YP_001502229.1 157962195 5662767 2895139..2896233 1 NC_009901.1 KEGG: slo:Shew_2087 hypothetical protein; hypothetical protein 2896233 5662767 Spea_2374 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502229.1 2895139 D 398579 CDS YP_001502230.1 157962196 5662768 complement(2896373..2898793) 1 NC_009901.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: vfi:VFA0360 sensory transduction protein kinase; histidine kinase 2898793 5662768 Spea_2375 Shewanella pealeana ATCC 700345 histidine kinase YP_001502230.1 2896373 R 398579 CDS YP_001502231.1 157962197 5662769 complement(2898952..2899200) 1 NC_009901.1 KEGG: saz:Sama_1854 conserved hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 2899200 5662769 Spea_2376 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis protein YP_001502231.1 2898952 R 398579 CDS YP_001502232.1 157962198 5662770 2899423..2899785 1 NC_009901.1 PFAM: response regulator receiver; KEGG: slo:Shew_0703 response regulator receiver protein; response regulator receiver protein 2899785 5662770 Spea_2377 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001502232.1 2899423 D 398579 CDS YP_001502233.1 157962199 5662771 complement(2900354..2901460) 1 NC_009901.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 2901460 thiH 5662771 thiH Shewanella pealeana ATCC 700345 thiamine biosynthesis protein ThiH YP_001502233.1 2900354 R 398579 CDS YP_001502234.1 157962200 5662772 complement(2901488..2902252) 1 NC_009901.1 PFAM: thiazole biosynthesis family protein; KEGG: sfr:Sfri_2197 thiazole biosynthesis family protein; thiazole biosynthesis family protein 2902252 5662772 Spea_2379 Shewanella pealeana ATCC 700345 thiazole biosynthesis family protein YP_001502234.1 2901488 R 398579 CDS YP_001502235.1 157962201 5662773 complement(2902254..2902487) 1 NC_009901.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: shw:Sputw3181_2083 thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2902487 5662773 Spea_2380 Shewanella pealeana ATCC 700345 thiamine biosynthesis protein ThiS YP_001502235.1 2902254 R 398579 CDS YP_001502236.1 157962202 5662774 complement(2902480..2903316) 1 NC_009901.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: shn:Shewana3_1938 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD-binding protein 2903316 5662774 Spea_2381 Shewanella pealeana ATCC 700345 UBA/THIF-type NAD/FAD-binding protein YP_001502236.1 2902480 R 398579 CDS YP_001502237.1 157962203 5662775 complement(2903306..2904898) 1 NC_009901.1 KEGG: son:SO_2444 phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; phosphomethylpyrimidine kinase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 2904898 5662775 Spea_2382 Shewanella pealeana ATCC 700345 phosphomethylpyrimidine kinase YP_001502237.1 2903306 R 398579 CDS YP_001502238.1 157962204 5662776 complement(2904901..2906904) 1 NC_009901.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2906904 5662776 Spea_2383 Shewanella pealeana ATCC 700345 thiamine biosynthesis protein ThiC YP_001502238.1 2904901 R 398579 CDS YP_001502239.1 157962205 5662777 complement(2907380..2908291) 1 NC_009901.1 KEGG: shn:Shewana3_1935 hypothetical protein; hypothetical protein 2908291 5662777 Spea_2384 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502239.1 2907380 R 398579 CDS YP_001502240.1 157962206 5662778 2908535..2909284 1 NC_009901.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: sbm:Shew185_2325 channel protein, hemolysin III family; hemolysin III family channel protein 2909284 5662778 Spea_2385 Shewanella pealeana ATCC 700345 hemolysin III family channel protein YP_001502240.1 2908535 D 398579 CDS YP_001502241.1 157962207 5662779 complement(2909344..2909859) 1 NC_009901.1 PFAM: DTW domain containing protein; KEGG: slo:Shew_2099 DTW domain containing protein; DTW domain-containing protein 2909859 5662779 Spea_2386 Shewanella pealeana ATCC 700345 DTW domain-containing protein YP_001502241.1 2909344 R 398579 CDS YP_001502242.1 157962208 5662780 complement(2910137..2910628) 1 NC_009901.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2910628 def 5662780 def Shewanella pealeana ATCC 700345 peptide deformylase YP_001502242.1 2910137 R 398579 CDS YP_001502243.1 157962209 5662781 2910896..2912617 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_2104 major facilitator superfamily MFS_1; major facilitator transporter 2912617 5662781 Spea_2388 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001502243.1 2910896 D 398579 CDS YP_001502244.1 157962210 5662782 complement(2912789..2913460) 1 NC_009901.1 hypothetical protein 2913460 5662782 Spea_2389 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502244.1 2912789 R 398579 CDS YP_001502245.1 157962211 5662783 2913671..2914024 1 NC_009901.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: shn:Shewana3_2320 methylated-DNA-(protein)-cysteine S-methyltransferase; DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase 2914024 5662783 Spea_2390 Shewanella pealeana ATCC 700345 DNA binding methylated-DNA-(protein)-cysteine S-methyltransferase YP_001502245.1 2913671 D 398579 CDS YP_001502246.1 157962212 5662784 2914046..2914831 1 NC_009901.1 KEGG: she:Shewmr4_2144 hypothetical protein; hypothetical protein 2914831 5662784 Spea_2391 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502246.1 2914046 D 398579 CDS YP_001502247.1 157962213 5662785 complement(2914909..2915694) 1 NC_009901.1 PFAM: glutamine amidotransferase class-II; KEGG: slo:Shew_2107 glutamine amidotransferase, class-II; glutamine amidotransferase 2915694 5662785 Spea_2392 Shewanella pealeana ATCC 700345 glutamine amidotransferase YP_001502247.1 2914909 R 398579 CDS YP_001502248.1 157962214 5662786 2915939..2918386 1 NC_009901.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2918386 fadE 5662786 fadE Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase YP_001502248.1 2915939 D 398579 CDS YP_001502249.1 157962215 5662787 complement(2918541..2919827) 1 NC_009901.1 KEGG: sfr:Sfri_0076 radical SAM domain protein; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; coproporphyrinogen dehydrogenase 2919827 5662787 Spea_2394 Shewanella pealeana ATCC 700345 coproporphyrinogen dehydrogenase YP_001502249.1 2918541 R 398579 CDS YP_001502250.1 157962216 5662788 complement(2920216..2920587) 1 NC_009901.1 hypothetical protein 2920587 5662788 Spea_2395 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502250.1 2920216 R 398579 CDS YP_001502251.1 157962217 5662789 complement(2920584..2920958) 1 NC_009901.1 hypothetical protein 2920958 5662789 Spea_2396 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502251.1 2920584 R 398579 CDS YP_001502252.1 157962218 5662790 complement(2921392..2922684) 1 NC_009901.1 KEGG: ppr:PBPRB0447 putative serine transporter; putative serine transporter 2922684 5662790 Spea_2397 Shewanella pealeana ATCC 700345 putative serine transporter YP_001502252.1 2921392 R 398579 CDS YP_001502253.1 157962219 5662791 2923555..2925525 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: ppr:PBPRA0989 hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2925525 5662791 Spea_2398 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001502253.1 2923555 D 398579 CDS YP_001502254.1 157962220 5662792 complement(2925949..2926629) 1 NC_009901.1 KEGG: she:Shewmr4_1472 hypothetical protein; hypothetical protein 2926629 5662792 Spea_2399 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502254.1 2925949 R 398579 CDS YP_001502255.1 157962221 5662793 complement(2926979..2928856) 1 NC_009901.1 PFAM: sodium/hydrogen exchanger; KEGG: sbm:Shew185_2017 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2928856 5662793 Spea_2400 Shewanella pealeana ATCC 700345 sodium/hydrogen exchanger YP_001502255.1 2926979 R 398579 CDS YP_001502256.1 157962222 5664779 complement(2930138..2931472) 1 NC_009901.1 KEGG: slo:Shew_2110 hypothetical protein; hypothetical protein 2931472 5664779 Spea_2401 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502256.1 2930138 R 398579 CDS YP_001502257.1 157962223 5662795 complement(2931483..2932211) 1 NC_009901.1 KEGG: slo:Shew_2111 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2932211 5662795 Spea_2402 Shewanella pealeana ATCC 700345 DNA polymerase III subunit epsilon YP_001502257.1 2931483 R 398579 CDS YP_001502258.1 157962224 5662796 2932212..2932769 1 NC_009901.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2932769 rnhA 5662796 rnhA Shewanella pealeana ATCC 700345 ribonuclease H YP_001502258.1 2932212 D 398579 CDS YP_001502259.1 157962225 5662797 complement(2932842..2933738) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbm:Shew185_2013 transcriptional regulator, LysR family; LysR family transcriptional regulator 2933738 5662797 Spea_2404 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001502259.1 2932842 R 398579 CDS YP_001502260.1 157962226 5662798 complement(2933747..2934487) 1 NC_009901.1 PFAM: Methyltransferase type 11; KEGG: slo:Shew_2113 hypothetical protein; type 11 methyltransferase 2934487 5662798 Spea_2405 Shewanella pealeana ATCC 700345 type 11 methyltransferase YP_001502260.1 2933747 R 398579 CDS YP_001502261.1 157962227 5662799 2934626..2935417 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: slo:Shew_2114 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 2935417 5662799 Spea_2406 Shewanella pealeana ATCC 700345 hydroxyacylglutathione hydrolase YP_001502261.1 2934626 D 398579 CDS YP_001502262.1 157962228 5662800 2935508..2937067 1 NC_009901.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase catalytic; MLTD_N domain protein; KEGG: slo:Shew_2115 lytic transglycosylase, catalytic; lytic transglycosylase 2937067 5662800 Spea_2407 Shewanella pealeana ATCC 700345 lytic transglycosylase YP_001502262.1 2935508 D 398579 CDS YP_001502263.1 157962229 5662801 complement(2937132..2937695) 1 NC_009901.1 KEGG: shw:Sputw3181_2251 intracellular proteinase inhibitor domain protein; intracellular proteinase inhibitor domain-containing protein 2937695 5662801 Spea_2408 Shewanella pealeana ATCC 700345 intracellular proteinase inhibitor domain-containing protein YP_001502263.1 2937132 R 398579 CDS YP_001502264.1 157962230 5662802 complement(2937695..2939533) 1 NC_009901.1 PFAM: AsmA family protein; KEGG: slo:Shew_2116 AsmA family protein; AsmA family protein 2939533 5662802 Spea_2409 Shewanella pealeana ATCC 700345 AsmA family protein YP_001502264.1 2937695 R 398579 CDS YP_001502265.1 157962231 5662803 complement(2939618..2940115) 1 NC_009901.1 TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase; KEGG: sbm:Shew185_2007 regulator of ribonuclease activity A; ribonuclease activity A regulator 2940115 5662803 Spea_2410 Shewanella pealeana ATCC 700345 ribonuclease activity A regulator YP_001502265.1 2939618 R 398579 CDS YP_001502266.1 157962232 5662804 2940303..2940620 1 NC_009901.1 KEGG: sbm:Shew185_2006 hypothetical protein; hypothetical protein 2940620 5662804 Spea_2411 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502266.1 2940303 D 398579 CDS YP_001502267.1 157962233 5662805 complement(2941156..2941785) 1 NC_009901.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 2941785 5662805 Spea_2412 Shewanella pealeana ATCC 700345 putative sulfite oxidase subunit YedZ YP_001502267.1 2941156 R 398579 CDS YP_001502268.1 157962234 5662806 complement(2941830..2942852) 1 NC_009901.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 2942852 5662806 Spea_2413 Shewanella pealeana ATCC 700345 putative sulfite oxidase subunit YedY YP_001502268.1 2941830 R 398579 CDS YP_001502269.1 157962235 5662807 2943067..2944590 1 NC_009901.1 PFAM: protein of unknown function DUF195; KEGG: slo:Shew_2124 protein of unknown function DUF195; hypothetical protein 2944590 5662807 Spea_2414 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502269.1 2943067 D 398579 CDS YP_001502270.1 157962236 5662808 2944618..2946549 1 NC_009901.1 PFAM: Lytic transglycosylase catalytic; KEGG: slo:Shew_2125 lytic transglycosylase, catalytic; lytic transglycosylase 2946549 5662808 Spea_2415 Shewanella pealeana ATCC 700345 lytic transglycosylase YP_001502270.1 2944618 D 398579 CDS YP_001502271.1 157962237 5662809 2946946..2947857 1 NC_009901.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: slo:Shew_2126 ATPase associated with various cellular activities, AAA_3; ATPase 2947857 5662809 Spea_2416 Shewanella pealeana ATCC 700345 ATPase YP_001502271.1 2946946 D 398579 CDS YP_001502272.1 157962238 5662810 2947930..2948946 1 NC_009901.1 PFAM: protein of unknown function DUF58; KEGG: sbl:Sbal_4562 hypothetical protein; hypothetical protein 2948946 5662810 Spea_2417 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502272.1 2947930 D 398579 CDS YP_001502273.1 157962239 5662811 2948943..2951012 1 NC_009901.1 PFAM: transglutaminase domain protein; KEGG: shw:Sputw3181_1903 transglutaminase domain protein; transglutaminase domain-containing protein 2951012 5662811 Spea_2418 Shewanella pealeana ATCC 700345 transglutaminase domain-containing protein YP_001502273.1 2948943 D 398579 CDS YP_001502274.1 157962240 5662812 2951072..2954881 1 NC_009901.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V RecC subunit; KEGG: slo:Shew_2129 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 2954881 5662812 Spea_2419 Shewanella pealeana ATCC 700345 exodeoxyribonuclease V subunit gamma YP_001502274.1 2951072 D 398579 CDS YP_001502275.1 157962241 5662813 2954883..2958599 1 NC_009901.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: slo:Shew_2130 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 2958599 5662813 Spea_2420 Shewanella pealeana ATCC 700345 exodeoxyribonuclease V subunit beta YP_001502275.1 2954883 D 398579 CDS YP_001502276.1 157962242 5662814 2958596..2960590 1 NC_009901.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: slo:Shew_2131 exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit alpha 2960590 5662814 Spea_2421 Shewanella pealeana ATCC 700345 exodeoxyribonuclease V subunit alpha YP_001502276.1 2958596 D 398579 CDS YP_001502277.1 157962243 5662815 2960862..2961866 1 NC_009901.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2961866 ddl 5662815 ddl Shewanella pealeana ATCC 700345 D-alanyl-alanine synthetase A YP_001502277.1 2960862 D 398579 CDS YP_001502278.1 157962244 5662816 complement(2961950..2962702) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 2962702 5662816 Spea_2423 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001502278.1 2961950 R 398579 CDS YP_001502279.1 157962245 5662817 complement(2962786..2963184) 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 2963184 5662817 Spea_2424 Shewanella pealeana ATCC 700345 transposase YP_001502279.1 2962786 R 398579 CDS YP_001502280.1 157962246 5662818 complement(2963294..2963893) 1 NC_009901.1 TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: saz:Sama_1624 periplasmic nitrate reductase C-type cytochrome, NapC/NirT; NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome 2963893 5662818 Spea_2425 Shewanella pealeana ATCC 700345 NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome YP_001502280.1 2963294 R 398579 CDS YP_001502281.1 157962247 5662819 complement(2963902..2964387) 1 NC_009901.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: shn:Shewana3_1901 nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit NapB 2964387 5662819 Spea_2426 Shewanella pealeana ATCC 700345 nitrate reductase cytochrome c-type subunit NapB YP_001502281.1 2963902 R 398579 CDS YP_001502282.1 157962248 5662820 complement(2964400..2966889) 1 NC_009901.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2966889 5662820 Spea_2427 Shewanella pealeana ATCC 700345 nitrate reductase catalytic subunit YP_001502282.1 2964400 R 398579 CDS YP_001502283.1 157962249 5662821 complement(2966892..2967149) 1 NC_009901.1 PFAM: NapD family protein; KEGG: sbl:Sbal_1909 NapD family protein; NapD family protein 2967149 5662821 Spea_2428 Shewanella pealeana ATCC 700345 NapD family protein YP_001502283.1 2966892 R 398579 CDS YP_001502284.1 157962250 5662822 complement(2967190..2967348) 1 NC_009901.1 PFAM: periplasmic nitrate reductase NapE; KEGG: slo:Shew_1768 periplasmic nitrate reductase NapE; periplasmic nitrate reductase NapE 2967348 5662822 Spea_2429 Shewanella pealeana ATCC 700345 periplasmic nitrate reductase NapE YP_001502284.1 2967190 R 398579 CDS YP_001502285.1 157962251 5662823 complement(2968293..2972180) 1 NC_009901.1 KEGG: slo:Shew_1767 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases; ATP-dependent helicase HrpA 2972180 5662823 Spea_2430 Shewanella pealeana ATCC 700345 ATP-dependent helicase HrpA YP_001502285.1 2968293 R 398579 CDS YP_001502286.1 157962252 5662824 complement(2972383..2972799) 1 NC_009901.1 PFAM: CBS domain containing protein; KEGG: shm:Shewmr7_2139 putative signal transduction protein with CBS domains; signal transduction protein 2972799 5662824 Spea_2431 Shewanella pealeana ATCC 700345 signal transduction protein YP_001502286.1 2972383 R 398579 CDS YP_001502287.1 157962253 5662825 complement(2972942..2973544) 1 NC_009901.1 hypothetical protein 2973544 5662825 Spea_2432 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502287.1 2972942 R 398579 CDS YP_001502288.1 157962254 5662826 complement(2973836..2974291) 1 NC_009901.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2974291 5662826 Spea_2433 Shewanella pealeana ATCC 700345 xanthine-guanine phosphoribosyltransferase YP_001502288.1 2973836 R 398579 CDS YP_001502289.1 157962255 5662827 complement(2974579..2974917) 1 NC_009901.1 KEGG: vpa:VPA0120 hypothetical protein; hypothetical protein 2974917 5662827 Spea_2434 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502289.1 2974579 R 398579 CDS YP_001502290.1 157962256 5662828 complement(2975127..2976212) 1 NC_009901.1 PFAM: peptidase T2 asparaginase 2; KEGG: slo:Shew_2171 peptidase T2, asparaginase 2; asparaginase 2976212 5662828 Spea_2435 Shewanella pealeana ATCC 700345 asparaginase YP_001502290.1 2975127 R 398579 CDS YP_001502291.1 157962257 5662829 2976381..2978207 1 NC_009901.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: she:Shewmr4_1836 surface antigen (D15); surface antigen (D15) 2978207 5662829 Spea_2436 Shewanella pealeana ATCC 700345 surface antigen (D15) YP_001502291.1 2976381 D 398579 CDS YP_001502292.1 157962258 5662830 2978204..2982265 1 NC_009901.1 PFAM: protein of unknown function DUF490; KEGG: slo:Shew_2173 protein of unknown function DUF490; hypothetical protein 2982265 5662830 Spea_2437 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502292.1 2978204 D 398579 CDS YP_001502293.1 157962259 5662831 complement(2982409..2983128) 1 NC_009901.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2983128 5662831 Spea_2438 Shewanella pealeana ATCC 700345 fatty acid metabolism regulator YP_001502293.1 2982409 R 398579 CDS YP_001502294.1 157962260 5662832 2983416..2985002 1 NC_009901.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 2985002 nhaB 5662832 nhaB Shewanella pealeana ATCC 700345 sodium/proton antiporter YP_001502294.1 2983416 D 398579 CDS YP_001502295.1 157962261 5662833 2985081..2985599 1 NC_009901.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 2985599 5662833 Spea_2440 Shewanella pealeana ATCC 700345 disulfide bond formation protein B YP_001502295.1 2985081 D 398579 CDS YP_001502296.1 157962262 5662834 complement(2985663..2986103) 1 NC_009901.1 PFAM: protein of unknown function UPF0153; KEGG: sbm:Shew185_1898 protein of unknown function UPF0153; hypothetical protein 2986103 5662834 Spea_2441 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502296.1 2985663 R 398579 CDS YP_001502297.1 157962263 5662835 complement(2986307..2987302) 1 NC_009901.1 TIGRFAM: lytic murein transglycosylase; KEGG: sbl:Sbal_1870 lytic murein transglycosylase; lytic murein transglycosylase 2987302 5662835 Spea_2442 Shewanella pealeana ATCC 700345 lytic murein transglycosylase YP_001502297.1 2986307 R 398579 CDS YP_001502298.1 157962264 5662836 complement(2987344..2987625) 1 NC_009901.1 PFAM: protein of unknown function DUF709; KEGG: slo:Shew_2183 protein of unknown function DUF709; hypothetical protein 2987625 5662836 Spea_2443 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502298.1 2987344 R 398579 CDS YP_001502299.1 157962265 5662837 2987700..2988410 1 NC_009901.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2988410 minC 5662837 minC Shewanella pealeana ATCC 700345 septum formation inhibitor YP_001502299.1 2987700 D 398579 CDS YP_001502300.1 157962266 5662838 2988442..2989251 1 NC_009901.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: slo:Shew_2185 septum site-determining protein MinD; septum site-determining protein MinD 2989251 5662838 Spea_2445 Shewanella pealeana ATCC 700345 septum site-determining protein MinD YP_001502300.1 2988442 D 398579 CDS YP_001502301.1 157962267 5662839 2989255..2989515 1 NC_009901.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2989515 minE 5662839 minE Shewanella pealeana ATCC 700345 cell division topological specificity factor MinE YP_001502301.1 2989255 D 398579 CDS YP_001502302.1 157962268 5662840 complement(2989575..2990684) 1 NC_009901.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: sdn:Sden_1626 ribonuclease D; ribonuclease D 2990684 5662840 Spea_2447 Shewanella pealeana ATCC 700345 ribonuclease D YP_001502302.1 2989575 R 398579 CDS YP_001502303.1 157962269 5662841 complement(2990779..2992446) 1 NC_009901.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2992446 5662841 Spea_2448 Shewanella pealeana ATCC 700345 long-chain-fatty-acid--CoA ligase YP_001502303.1 2990779 R 398579 CDS YP_001502304.1 157962270 5662842 complement(2992633..2993508) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: shm:Shewmr7_2255 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2993508 5662842 Spea_2449 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001502304.1 2992633 R 398579 CDS YP_001502305.1 157962271 5662843 complement(2993517..2994347) 1 NC_009901.1 KEGG: slo:Shew_2190 hypothetical protein; hypothetical protein 2994347 5662843 Spea_2450 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502305.1 2993517 R 398579 CDS YP_001502306.1 157962272 5662844 complement(2994423..2995136) 1 NC_009901.1 KEGG: shw:Sputw3181_2267 hypothetical protein; hypothetical protein 2995136 5662844 Spea_2451 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502306.1 2994423 R 398579 CDS YP_001502307.1 157962273 5662845 complement(2995129..2995437) 1 NC_009901.1 KEGG: shw:Sputw3181_2268 hypothetical protein; hypothetical protein 2995437 5662845 Spea_2452 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502307.1 2995129 R 398579 CDS YP_001502308.1 157962274 5662846 complement(2995486..2996202) 1 NC_009901.1 PFAM: peptidase M22 glycoprotease; KEGG: sbm:Shew185_1886 peptidase M22 glycoprotease; peptidase M22 glycoprotease 2996202 5662846 Spea_2453 Shewanella pealeana ATCC 700345 peptidase M22 glycoprotease YP_001502308.1 2995486 R 398579 CDS YP_001502309.1 157962275 5662847 2996567..2996992 1 NC_009901.1 hypothetical protein 2996992 5662847 Spea_2454 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502309.1 2996567 D 398579 CDS YP_001502310.1 157962276 5662848 complement(2996985..2998910) 1 NC_009901.1 SMART: helicase c2; DEAD-like helicases; KEGG: slo:Shew_2196 helicase C2; helicase c2 2998910 5662848 Spea_2455 Shewanella pealeana ATCC 700345 helicase c2 YP_001502310.1 2996985 R 398579 CDS YP_001502311.1 157962277 5662849 2999471..3000370 1 NC_009901.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 3000370 hisG 5662849 hisG Shewanella pealeana ATCC 700345 ATP phosphoribosyltransferase YP_001502311.1 2999471 D 398579 CDS YP_001502312.1 157962278 5662850 3000375..3001703 1 NC_009901.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 3001703 hisD 5662850 hisD Shewanella pealeana ATCC 700345 histidinol dehydrogenase YP_001502312.1 3000375 D 398579 CDS YP_001502313.1 157962279 5662851 3001700..3002755 1 NC_009901.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3002755 5662851 Spea_2458 Shewanella pealeana ATCC 700345 histidinol-phosphate aminotransferase YP_001502313.1 3001700 D 398579 CDS YP_001502314.1 157962280 5662852 3002843..3003937 1 NC_009901.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 3003937 5662852 Spea_2459 Shewanella pealeana ATCC 700345 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_001502314.1 3002843 D 398579 CDS YP_001502315.1 157962281 5662853 3003934..3004677 1 NC_009901.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 3004677 hisH 5662853 hisH Shewanella pealeana ATCC 700345 imidazole glycerol phosphate synthase subunit HisH YP_001502315.1 3003934 D 398579 CDS YP_001502316.1 157962282 5662854 3004674..3005411 1 NC_009901.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3005411 5662854 Spea_2461 Shewanella pealeana ATCC 700345 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001502316.1 3004674 D 398579 CDS YP_001502317.1 157962283 5662855 3005393..3006166 1 NC_009901.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 3006166 5662855 Spea_2462 Shewanella pealeana ATCC 700345 imidazole glycerol phosphate synthase subunit HisF YP_001502317.1 3005393 D 398579 CDS YP_001502318.1 157962284 5662856 3006202..3006840 1 NC_009901.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 3006840 5662856 Spea_2463 Shewanella pealeana ATCC 700345 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_001502318.1 3006202 D 398579 CDS YP_001502319.1 157962285 5662857 3007082..3008185 1 NC_009901.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 3008185 5662857 Spea_2464 Shewanella pealeana ATCC 700345 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_001502319.1 3007082 D 398579 CDS YP_001502320.1 157962286 5662858 3008289..3008687 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 3008687 5662858 Spea_2465 Shewanella pealeana ATCC 700345 transposase YP_001502320.1 3008289 D 398579 CDS YP_001502321.1 157962287 5662859 3008771..3009523 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 3009523 5662859 Spea_2466 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001502321.1 3008771 D 398579 CDS YP_001502322.1 157962288 5662860 complement(3009622..3010560) 1 NC_009901.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 3010560 5662860 Spea_2467 Shewanella pealeana ATCC 700345 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_001502322.1 3009622 R 398579 CDS YP_001502323.1 157962289 5662861 complement(3010638..3010934) 1 NC_009901.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 3010934 ihfA 5662861 ihfA Shewanella pealeana ATCC 700345 integration host factor subunit alpha YP_001502323.1 3010638 R 398579 CDS YP_001502324.1 157962290 5662862 complement(3010939..3013326) 1 NC_009901.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 3013326 pheT 5662862 pheT Shewanella pealeana ATCC 700345 phenylalanyl-tRNA synthetase subunit beta YP_001502324.1 3010939 R 398579 CDS YP_001502325.1 157962291 5662863 complement(3013343..3014329) 1 NC_009901.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 3014329 pheS 5662863 pheS Shewanella pealeana ATCC 700345 phenylalanyl-tRNA synthetase subunit alpha YP_001502325.1 3013343 R 398579 CDS YP_001502326.1 157962292 5662864 3014768..3016267 1 NC_009901.1 PFAM: chemotaxis sensory transducer; KEGG: slo:Shew_2217 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3016267 5662864 Spea_2471 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001502326.1 3014768 D 398579 CDS YP_001502327.1 157962293 5662865 3016457..3019057 1 NC_009901.1 KEGG: sbm:Shew185_1768 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 3019057 5662865 Spea_2472 Shewanella pealeana ATCC 700345 putative PAS/PAC sensor protein YP_001502327.1 3016457 D 398579 CDS YP_001502328.1 157962294 5662866 complement(3019143..3020018) 1 NC_009901.1 PFAM: protein of unknown function DUF785; KEGG: slo:Shew_2219 protein of unknown function DUF785; hypothetical protein 3020018 5662866 Spea_2473 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502328.1 3019143 R 398579 CDS YP_001502329.1 157962295 5662867 complement(3020193..3020489) 1 NC_009901.1 KEGG: slo:Shew_2221 hypothetical protein; hypothetical protein 3020489 5662867 Spea_2474 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502329.1 3020193 R 398579 CDS YP_001502330.1 157962296 5662868 complement(3020589..3020942) 1 NC_009901.1 KEGG: slo:Shew_2222 hypothetical protein; hypothetical protein 3020942 5662868 Spea_2475 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502330.1 3020589 R 398579 CDS YP_001502331.1 157962297 5662869 complement(3021310..3021885) 1 NC_009901.1 PFAM: YceI family protein; KEGG: son:SO_2893 hypothetical protein; hypothetical protein 3021885 5662869 Spea_2476 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502331.1 3021310 R 398579 CDS YP_001502332.1 157962298 5662870 complement(3022089..3022727) 1 NC_009901.1 KEGG: slo:Shew_1622 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; pyridoxamine 5'-phosphate oxidase 3022727 5662870 Spea_2477 Shewanella pealeana ATCC 700345 pyridoxamine 5'-phosphate oxidase YP_001502332.1 3022089 R 398579 CDS YP_001502333.1 157962299 5662871 complement(3022869..3023798) 1 NC_009901.1 catalyzes the formation of putrescine from agmatine; agmatinase 3023798 5662871 Spea_2478 Shewanella pealeana ATCC 700345 agmatinase YP_001502333.1 3022869 R 398579 CDS YP_001502334.1 157962300 5662872 complement(3023823..3024743) 1 NC_009901.1 PFAM: S-adenosylmethionine decarboxylase; KEGG: saz:Sama_1962 adenosylmethionine decarboxylase; adenosylmethionine decarboxylase 3024743 5662872 Spea_2479 Shewanella pealeana ATCC 700345 adenosylmethionine decarboxylase YP_001502334.1 3023823 R 398579 CDS YP_001502335.1 157962301 5662873 complement(3025010..3026923) 1 NC_009901.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 3026923 5662873 Spea_2480 Shewanella pealeana ATCC 700345 arginine decarboxylase YP_001502335.1 3025010 R 398579 CDS YP_001502336.1 157962302 5662874 3027546..3028379 1 NC_009901.1 KEGG: slo:Shew_1618 hypothetical protein; hypothetical protein 3028379 5662874 Spea_2481 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502336.1 3027546 D 398579 CDS YP_001502337.1 157962303 5662875 3028508..3029158 1 NC_009901.1 PFAM: protein of unknown function DUF480; KEGG: she:Shewmr4_1554 protein of unknown function DUF480; hypothetical protein 3029158 5662875 Spea_2482 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502337.1 3028508 D 398579 CDS YP_001502338.1 157962304 5662876 3029284..3030093 1 NC_009901.1 KEGG: shn:Shewana3_1621 hypothetical protein; hypothetical protein 3030093 5662876 Spea_2483 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502338.1 3029284 D 398579 CDS YP_001502339.1 157962305 5662877 3030090..3030995 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_2383 ABC transporter related; ABC transporter-like protein 3030995 5662877 Spea_2484 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001502339.1 3030090 D 398579 CDS YP_001502340.1 157962306 5662878 complement(3031397..3031603) 1 NC_009901.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: slo:Shew_1614 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 3031603 5662878 Spea_2485 Shewanella pealeana ATCC 700345 cold-shock DNA-binding domain-containing protein YP_001502340.1 3031397 R 398579 CDS YP_001502341.1 157962307 5662879 complement(3031906..3032712) 1 NC_009901.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A 3032712 rrmA 5662879 rrmA Shewanella pealeana ATCC 700345 23S rRNA methyltransferase A YP_001502341.1 3031906 R 398579 CDS YP_001502342.1 157962308 5662880 3033204..3034616 1 NC_009901.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 3034616 sbcB 5662880 sbcB Shewanella pealeana ATCC 700345 exonuclease I YP_001502342.1 3033204 D 398579 CDS YP_001502343.1 157962309 5662881 3034712..3035602 1 NC_009901.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 3035602 5662881 Spea_2488 Shewanella pealeana ATCC 700345 cytidine deaminase YP_001502343.1 3034712 D 398579 CDS YP_001502344.1 157962310 5662882 complement(3035681..3036556) 1 NC_009901.1 PFAM: oxidoreductase domain protein; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: slo:Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding; NAD-binding 6-phosphogluconate dehydrogenase 3036556 5662882 Spea_2489 Shewanella pealeana ATCC 700345 NAD-binding 6-phosphogluconate dehydrogenase YP_001502344.1 3035681 R 398579 CDS YP_001502345.1 157962311 5662883 complement(3036694..3037194) 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: slo:Shew_1607 thioesterase superfamily protein; thioesterase superfamily protein 3037194 5662883 Spea_2490 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001502345.1 3036694 R 398579 CDS YP_001502346.1 157962312 5662884 complement(3037260..3037628) 1 NC_009901.1 KEGG: shm:Shewmr7_2463 hypothetical protein; hypothetical protein 3037628 5662884 Spea_2491 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502346.1 3037260 R 398579 CDS YP_001502347.1 157962313 5662885 complement(3037867..3039105) 1 NC_009901.1 PFAM: Beta-ketoacyl synthase; KEGG: shm:Shewmr7_2464 beta-ketoacyl synthase; beta-ketoacyl synthase 3039105 5662885 Spea_2492 Shewanella pealeana ATCC 700345 beta-ketoacyl synthase YP_001502347.1 3037867 R 398579 CDS YP_001502348.1 157962314 5662886 complement(3039360..3039593) 1 NC_009901.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 3039593 acpP 5662886 acpP Shewanella pealeana ATCC 700345 acyl carrier protein YP_001502348.1 3039360 R 398579 CDS YP_001502349.1 157962315 5662887 complement(3039750..3040496) 1 NC_009901.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: son:SO_2776 3-oxoacyl-[acyl-carrier protein] reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 3040496 5662887 Spea_2494 Shewanella pealeana ATCC 700345 3-oxoacyl-(acyl-carrier-protein) reductase YP_001502349.1 3039750 R 398579 CDS YP_001502350.1 157962316 5662888 complement(3040506..3041432) 1 NC_009901.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: sbm:Shew185_1715 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 3041432 5662888 Spea_2495 Shewanella pealeana ATCC 700345 malonyl CoA-acyl carrier protein transacylase YP_001502350.1 3040506 R 398579 CDS YP_001502351.1 157962317 5662889 complement(3041510..3042469) 1 NC_009901.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3042469 5662889 Spea_2496 Shewanella pealeana ATCC 700345 3-oxoacyl-ACP synthase YP_001502351.1 3041510 R 398579 CDS YP_001502352.1 157962318 5662890 complement(3042480..3043508) 1 NC_009901.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 3043508 5662890 Spea_2497 Shewanella pealeana ATCC 700345 putative glycerol-3-phosphate acyltransferase PlsX YP_001502352.1 3042480 R 398579 CDS YP_001502353.1 157962319 5662891 complement(3043524..3043694) 1 NC_009901.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 3043694 rpmF 5662891 rpmF Shewanella pealeana ATCC 700345 50S ribosomal protein L32 YP_001502353.1 3043524 R 398579 CDS YP_001502354.1 157962320 5662892 complement(3043712..3044236) 1 NC_009901.1 PFAM: protein of unknown function DUF177; KEGG: son:SO_2781 hypothetical protein; hypothetical protein 3044236 5662892 Spea_2499 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502354.1 3043712 R 398579 CDS YP_001502355.1 157962321 5662893 3045122..3045703 1 NC_009901.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: son:SO_2782 maf protein, putative; maf protein 3045703 5662893 Spea_2500 Shewanella pealeana ATCC 700345 maf protein YP_001502355.1 3045122 D 398579 CDS YP_001502356.1 157962322 5662894 3045885..3047243 1 NC_009901.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: slo:Shew_1596 diguanylate cyclase with PAS/PAC sensor; PAS/PAC sensor-containing diguanylate cyclase 3047243 5662894 Spea_2501 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase YP_001502356.1 3045885 D 398579 CDS YP_001502357.1 157962323 5662895 complement(3047445..3048047) 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: slo:Shew_1595 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 3048047 5662895 Spea_2502 Shewanella pealeana ATCC 700345 HAD family hydrolase YP_001502357.1 3047445 R 398579 CDS YP_001502358.1 157962324 5662896 complement(3048089..3049048) 1 NC_009901.1 KEGG: slo:Shew_1594 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 3049048 5662896 Spea_2503 Shewanella pealeana ATCC 700345 RluA family pseudouridine synthase YP_001502358.1 3048089 R 398579 CDS YP_001502359.1 157962325 5662897 3049646..3052900 1 NC_009901.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: slo:Shew_1593 ribonuclease, Rne/Rng family; ribonuclease 3052900 5662897 Spea_2504 Shewanella pealeana ATCC 700345 ribonuclease YP_001502359.1 3049646 D 398579 CDS YP_001502360.1 157962326 5662898 3053031..3054590 1 NC_009901.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: slo:Shew_1592 sulphate transporter; sulfate transporter 3054590 5662898 Spea_2505 Shewanella pealeana ATCC 700345 sulfate transporter YP_001502360.1 3053031 D 398579 CDS YP_001502361.1 157962327 5662899 complement(3054666..3055568) 1 NC_009901.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein 3055568 5662899 Spea_2506 Shewanella pealeana ATCC 700345 bifunctional methionine sulfoxide reductase B/A protein YP_001502361.1 3054666 R 398579 CDS YP_001502362.1 157962328 5662900 3056014..3056853 1 NC_009901.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: slo:Shew_1590 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 3056853 5662900 Spea_2507 Shewanella pealeana ATCC 700345 2OG-Fe(II) oxygenase YP_001502362.1 3056014 D 398579 CDS YP_001502363.1 157962329 5662901 3056971..3057909 1 NC_009901.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 3057909 rbgA 5662901 rbgA Shewanella pealeana ATCC 700345 ribosomal biogenesis GTPase YP_001502363.1 3056971 D 398579 CDS YP_001502364.1 157962330 5662902 complement(3058044..3058532) 1 NC_009901.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: saz:Sama_1994 protein tyrosine phosphatase; protein tyrosine phosphatase 3058532 5662902 Spea_2509 Shewanella pealeana ATCC 700345 protein tyrosine phosphatase YP_001502364.1 3058044 R 398579 CDS YP_001502365.1 157962331 5662903 3058779..3059435 1 NC_009901.1 PFAM: nitroreductase; KEGG: sdn:Sden_2794 nitroreductase; nitroreductase 3059435 5662903 Spea_2510 Shewanella pealeana ATCC 700345 nitroreductase YP_001502365.1 3058779 D 398579 CDS YP_001502366.1 157962332 5662904 complement(3059563..3060438) 1 NC_009901.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 3060438 5662904 Spea_2511 Shewanella pealeana ATCC 700345 DNA ligase YP_001502366.1 3059563 R 398579 CDS YP_001502367.1 157962333 5662905 3060701..3061072 1 NC_009901.1 PFAM: diacylglycerol kinase; KEGG: shn:Shewana3_2402 diacylglycerol kinase; diacylglycerol kinase 3061072 5662905 Spea_2512 Shewanella pealeana ATCC 700345 diacylglycerol kinase YP_001502367.1 3060701 D 398579 CDS YP_001502368.1 157962334 5662906 3061478..3062350 1 NC_009901.1 KEGG: slo:Shew_1585 hypothetical protein; hypothetical protein 3062350 5662906 Spea_2513 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502368.1 3061478 D 398579 CDS YP_001502369.1 157962335 5662907 3063013..3064038 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbm:Shew185_1831 diguanylate cyclase; diguanylate cyclase 3064038 5662907 Spea_2514 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502369.1 3063013 D 398579 CDS YP_001502370.1 157962336 5662908 complement(3064166..3064855) 1 NC_009901.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: she:Shewmr4_2199 sortase family protein; sortase family protein 3064855 5662908 Spea_2515 Shewanella pealeana ATCC 700345 sortase family protein YP_001502370.1 3064166 R 398579 CDS YP_001502371.1 157962337 5662909 complement(3064855..3067224) 1 NC_009901.1 KEGG: shm:Shewmr7_2277 vault protein inter-alpha-trypsin domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; cell wall anchor domain-containing protein 3067224 5662909 Spea_2516 Shewanella pealeana ATCC 700345 cell wall anchor domain-containing protein YP_001502371.1 3064855 R 398579 CDS YP_001502372.1 157962338 5662910 complement(3067306..3068055) 1 NC_009901.1 PFAM: OmpA/MotB domain protein; KEGG: sfr:Sfri_1624 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 3068055 5662910 Spea_2517 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001502372.1 3067306 R 398579 CDS YP_001502373.1 157962339 5662911 3068300..3068992 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_1791 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3068992 5662911 Spea_2518 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001502373.1 3068300 D 398579 CDS YP_001502374.1 157962340 5662912 3069089..3071275 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_1790 integral membrane sensor signal transduction histidine kinase; histidine kinase 3071275 5662912 Spea_2519 Shewanella pealeana ATCC 700345 histidine kinase YP_001502374.1 3069089 D 398579 CDS YP_001502375.1 157962341 5662913 3071448..3072668 1 NC_009901.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 3072668 5662913 Spea_2520 Shewanella pealeana ATCC 700345 cystathionine beta-lyase YP_001502375.1 3071448 D 398579 CDS YP_001502376.1 157962342 5662914 3072832..3073413 1 NC_009901.1 KEGG: vfi:VF1617 hypothetical protein; hypothetical protein 3073413 5662914 Spea_2521 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502376.1 3072832 D 398579 CDS YP_001502377.1 157962343 5662915 complement(3073523..3074017) 1 NC_009901.1 PFAM: CreA family protein; KEGG: shn:Shewana3_2415 CreA family protein; CreA family protein 3074017 5662915 Spea_2522 Shewanella pealeana ATCC 700345 CreA family protein YP_001502377.1 3073523 R 398579 CDS YP_001502378.1 157962344 5662916 complement(3074106..3075473) 1 NC_009901.1 KEGG: slo:Shew_1787 hypothetical protein; putative chaperone 3075473 5662916 Spea_2523 Shewanella pealeana ATCC 700345 putative chaperone YP_001502378.1 3074106 R 398579 CDS YP_001502379.1 157962345 5662917 complement(3075633..3076616) 1 NC_009901.1 PFAM: Rhodanese domain protein; KEGG: sdn:Sden_2100 rhodanese-like protein; rhodanese domain-containing protein 3076616 5662917 Spea_2524 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001502379.1 3075633 R 398579 CDS YP_001502380.1 157962346 5662918 3076901..3077626 1 NC_009901.1 PFAM: Glutathione S-transferase domain; KEGG: slo:Shew_1780 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 3077626 5662918 Spea_2525 Shewanella pealeana ATCC 700345 glutathione S-transferase domain-containing protein YP_001502380.1 3076901 D 398579 CDS YP_001502381.1 157962347 5662919 complement(3077683..3078288) 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shn:Shewana3_2265 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 3078288 5662919 Spea_2526 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001502381.1 3077683 R 398579 CDS YP_001502382.1 157962348 5662920 3078453..3079820 1 NC_009901.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sbl:Sbal_2383 putative transcriptional regulator, GntR family; transcriptional regulator 3079820 5662920 Spea_2527 Shewanella pealeana ATCC 700345 transcriptional regulator YP_001502382.1 3078453 D 398579 CDS YP_001502383.1 157962349 5662921 complement(3079920..3080396) 1 NC_009901.1 PFAM: 17 kDa surface antigen; KEGG: slo:Shew_1570 17 kDa surface antigen; 17 kDa surface antigen 3080396 5662921 Spea_2528 Shewanella pealeana ATCC 700345 17 kDa surface antigen YP_001502383.1 3079920 R 398579 CDS YP_001502384.1 157962350 5662922 3080451..3081161 1 NC_009901.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 3081161 aat 5662922 aat Shewanella pealeana ATCC 700345 leucyl/phenylalanyl-tRNA--protein transferase YP_001502384.1 3080451 D 398579 CDS YP_001502385.1 157962351 5662923 3081151..3081876 1 NC_009901.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 3081876 5662923 Spea_2530 Shewanella pealeana ATCC 700345 arginyl-tRNA-protein transferase YP_001502385.1 3081151 D 398579 CDS YP_001502386.1 157962352 5662924 3081991..3082209 1 NC_009901.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 3082209 infA 5662924 infA Shewanella pealeana ATCC 700345 translation initiation factor IF-1 YP_001502386.1 3081991 D 398579 CDS YP_001502387.1 157962353 5662925 complement(3082342..3084600) 1 NC_009901.1 KEGG: slo:Shew_1566 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 3084600 5662925 Spea_2532 Shewanella pealeana ATCC 700345 ATP-dependent Clp protease ATP-binding protein ClpA YP_001502387.1 3082342 R 398579 CDS YP_001502388.1 157962354 5662926 complement(3084639..3084947) 1 NC_009901.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 3084947 clpS 5662926 clpS Shewanella pealeana ATCC 700345 ATP-dependent Clp protease adaptor protein ClpS YP_001502388.1 3084639 R 398579 CDS YP_001502389.1 157962355 5662927 3085187..3085393 1 NC_009901.1 KEGG: sbm:Shew185_2467 putative cold-shock DNA-binding domain protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 3085393 5662927 Spea_2534 Shewanella pealeana ATCC 700345 cold-shock DNA-binding domain-containing protein YP_001502389.1 3085187 D 398579 CDS YP_001502390.1 157962356 5662928 complement(3085561..3087783) 1 NC_009901.1 KEGG: sfr:Sfri_2257 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent monomeric type; isocitrate dehydrogenase 3087783 5662928 Spea_2535 Shewanella pealeana ATCC 700345 isocitrate dehydrogenase YP_001502390.1 3085561 R 398579 CDS YP_001502391.1 157962357 5662929 3088087..3088821 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: she:Shewmr4_1605 pseudouridine synthase, Rsu; pseudouridine synthase 3088821 5662929 Spea_2536 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001502391.1 3088087 D 398579 CDS YP_001502392.1 157962358 5662930 3088832..3089284 1 NC_009901.1 PFAM: NUDIX hydrolase; KEGG: sfr:Sfri_2259 NUDIX hydrolase; NUDIX hydrolase 3089284 5662930 Spea_2537 Shewanella pealeana ATCC 700345 NUDIX hydrolase YP_001502392.1 3088832 D 398579 CDS YP_001502393.1 157962359 5662931 3089471..3090667 1 NC_009901.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 3090667 mnmA 5662931 mnmA Shewanella pealeana ATCC 700345 tRNA-specific 2-thiouridylase MnmA YP_001502393.1 3089471 D 398579 CDS YP_001502394.1 157962360 5662932 3090671..3091288 1 NC_009901.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 3091288 5662932 Spea_2539 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502394.1 3090671 D 398579 CDS YP_001502395.1 157962361 5662933 3091320..3092690 1 NC_009901.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 3092690 5662933 Spea_2540 Shewanella pealeana ATCC 700345 adenylosuccinate lyase YP_001502395.1 3091320 D 398579 CDS YP_001502396.1 157962362 5662934 3092865..3093995 1 NC_009901.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: spc:Sputcn32_2236 cupin 4 family protein; cupin 4 family protein 3093995 5662934 Spea_2541 Shewanella pealeana ATCC 700345 cupin 4 family protein YP_001502396.1 3092865 D 398579 CDS YP_001502397.1 157962363 5662935 complement(3094086..3094511) 1 NC_009901.1 KEGG: sfr:Sfri_2264 hypothetical protein; hypothetical protein 3094511 5662935 Spea_2542 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502397.1 3094086 R 398579 CDS YP_001502398.1 157962364 5662936 3094774..3095805 1 NC_009901.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: slo:Shew_1555 Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 3095805 5662936 Spea_2543 Shewanella pealeana ATCC 700345 Glu/Leu/Phe/Val dehydrogenase YP_001502398.1 3094774 D 398579 CDS YP_001502399.1 157962365 5662937 3095982..3096326 1 NC_009901.1 KEGG: shw:Sputw3181_1770 hypothetical protein; hypothetical protein 3096326 5662937 Spea_2544 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502399.1 3095982 D 398579 CDS YP_001502400.1 157962366 5662938 complement(3096391..3096804) 1 NC_009901.1 KEGG: slo:Shew_1553 hypothetical protein; hypothetical protein 3096804 5662938 Spea_2545 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502400.1 3096391 R 398579 CDS YP_001502401.1 157962367 5662939 complement(3096901..3097314) 1 NC_009901.1 PFAM: regulatory protein MarR; KEGG: shm:Shewmr7_1670 transcriptional regulator, MarR family; MarR family transcriptional regulator 3097314 5662939 Spea_2546 Shewanella pealeana ATCC 700345 MarR family transcriptional regulator YP_001502401.1 3096901 R 398579 CDS YP_001502402.1 157962368 5662940 complement(3097471..3097914) 1 NC_009901.1 KEGG: son:SO_2642 hypothetical protein; hypothetical protein 3097914 5662940 Spea_2547 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502402.1 3097471 R 398579 CDS YP_001502403.1 157962369 5662941 complement(3098005..3101055) 1 NC_009901.1 PFAM: FAD linked oxidase domain protein; KEGG: shw:Sputw3181_1766 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 3101055 5662941 Spea_2548 Shewanella pealeana ATCC 700345 FAD linked oxidase domain-containing protein YP_001502403.1 3098005 R 398579 CDS YP_001502404.1 157962370 5662942 complement(3101185..3103554) 1 NC_009901.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 3103554 5662942 Spea_2549 Shewanella pealeana ATCC 700345 phosphoenolpyruvate synthase YP_001502404.1 3101185 R 398579 CDS YP_001502405.1 157962371 5662943 3103681..3104493 1 NC_009901.1 PFAM: protein of unknown function DUF299; KEGG: slo:Shew_1548 protein of unknown function DUF299; hypothetical protein 3104493 5662943 Spea_2550 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502405.1 3103681 D 398579 CDS YP_001502406.1 157962372 5662944 3104684..3105751 1 NC_009901.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 3105751 5662944 Spea_2551 Shewanella pealeana ATCC 700345 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001502406.1 3104684 D 398579 CDS YP_001502407.1 157962373 5662945 complement(3106152..3106598) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbm:Shew185_0944 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3106598 5662945 Spea_2552 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502407.1 3106152 R 398579 CDS YP_001502408.1 157962374 5662946 3106930..3107358 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: saz:Sama_2075 thioesterase superfamily; thioesterase superfamily protein 3107358 5662946 Spea_2553 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001502408.1 3106930 D 398579 CDS YP_001502409.1 157962375 5662947 3107611..3108270 1 NC_009901.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: slo:Shew_1545 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3108270 5662947 Spea_2554 Shewanella pealeana ATCC 700345 two component LuxR family transcriptional regulator YP_001502409.1 3107611 D 398579 CDS YP_001502410.1 157962376 5662948 complement(3108354..3109643) 1 NC_009901.1 PFAM: FAD dependent oxidoreductase; KEGG: slo:Shew_1537 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3109643 5662948 Spea_2555 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001502410.1 3108354 R 398579 CDS YP_001502411.1 157962377 5662949 3109992..3110324 1 NC_009901.1 KEGG: sfr:Sfri_1438 hypothetical protein; hypothetical protein 3110324 5662949 Spea_2556 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502411.1 3109992 D 398579 CDS YP_001502412.1 157962378 5662950 complement(3110390..3113818) 1 NC_009901.1 PFAM: Na+/solute symporter; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: slo:Shew_1534 integral membrane sensor hybrid histidine kinase; histidine kinase 3113818 5662950 Spea_2557 Shewanella pealeana ATCC 700345 histidine kinase YP_001502412.1 3110390 R 398579 CDS YP_001502413.1 157962379 5662951 3113995..3115947 1 NC_009901.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 3115947 5662951 Spea_2558 Shewanella pealeana ATCC 700345 acetyl-CoA synthetase YP_001502413.1 3113995 D 398579 CDS YP_001502414.1 157962380 5662952 3116131..3117873 1 NC_009901.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: shm:Shewmr7_2435 type III restriction enzyme, res subunit; type III restriction protein res subunit 3117873 5662952 Spea_2559 Shewanella pealeana ATCC 700345 type III restriction protein res subunit YP_001502414.1 3116131 D 398579 CDS YP_001502415.1 157962381 5662953 3117970..3118236 1 NC_009901.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 3118236 grxA 5662953 grxA Shewanella pealeana ATCC 700345 glutaredoxin YP_001502415.1 3117970 D 398579 CDS YP_001502416.1 157962382 5662954 complement(3118298..3119458) 1 NC_009901.1 PFAM: porin; KEGG: slo:Shew_1530 porin; porin 3119458 5662954 Spea_2561 Shewanella pealeana ATCC 700345 porin YP_001502416.1 3118298 R 398579 CDS YP_001502417.1 157962383 5664791 complement(3122035..3122760) 1 NC_009901.1 TIGRFAM: Tol-Pal system YbgF; PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: shw:Sputw3181_2413 tetratricopeptide domain protein; Tol-Pal system protein YbgF 3122760 5664791 Spea_2562 Shewanella pealeana ATCC 700345 Tol-Pal system protein YbgF YP_001502417.1 3122035 R 398579 CDS YP_001502418.1 157962384 5662956 complement(3122785..3123324) 1 NC_009901.1 TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: slo:Shew_1528 OmpA domain protein; peptidoglycan-associated lipoprotein 3123324 5662956 Spea_2563 Shewanella pealeana ATCC 700345 peptidoglycan-associated lipoprotein YP_001502418.1 3122785 R 398579 CDS YP_001502419.1 157962385 5662957 complement(3123349..3124671) 1 NC_009901.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3124671 tolB 5662957 tolB Shewanella pealeana ATCC 700345 translocation protein TolB YP_001502419.1 3123349 R 398579 CDS YP_001502420.1 157962386 5662958 complement(3124681..3125616) 1 NC_009901.1 TIGRFAM: Tol-Pal system TolA; PFAM: TolA family protein; KEGG: slo:Shew_1526 TolA family protein; Tol-Pal system TolA 3125616 5662958 Spea_2565 Shewanella pealeana ATCC 700345 Tol-Pal system TolA YP_001502420.1 3124681 R 398579 CDS YP_001502421.1 157962387 5662959 complement(3125617..3126054) 1 NC_009901.1 TIGRFAM: Biopolymer transport TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: slo:Shew_1525 biopolymer transport protein ExbD/TolR; biopolymer transport TolR 3126054 5662959 Spea_2566 Shewanella pealeana ATCC 700345 biopolymer transport TolR YP_001502421.1 3125617 R 398579 CDS YP_001502422.1 157962388 5662960 complement(3126054..3126743) 1 NC_009901.1 TIGRFAM: Tol-Pal system TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: slo:Shew_1524 MotA/TolQ/ExbB proton channel; Tol-Pal system protein TolQ 3126743 5662960 Spea_2567 Shewanella pealeana ATCC 700345 Tol-Pal system protein TolQ YP_001502422.1 3126054 R 398579 CDS YP_001502423.1 157962389 5662961 complement(3126733..3127206) 1 NC_009901.1 TIGRFAM: Pol-Pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: shn:Shewana3_2535 4-hydroxybenzoyl-CoA thioesterase; Pol-Pal system-associated acyl-CoA thioesterase 3127206 5662961 Spea_2568 Shewanella pealeana ATCC 700345 Pol-Pal system-associated acyl-CoA thioesterase YP_001502423.1 3126733 R 398579 CDS YP_001502424.1 157962390 5662962 complement(3127371..3129527) 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: slo:Shew_1522 prolyl oligopeptidase; prolyl oligopeptidase 3129527 5662962 Spea_2569 Shewanella pealeana ATCC 700345 prolyl oligopeptidase YP_001502424.1 3127371 R 398579 CDS YP_001502425.1 157962391 5662963 complement(3130162..3131031) 1 NC_009901.1 PFAM: OmpA/MotB domain protein; KEGG: sbm:Shew185_1736 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 3131031 5662963 Spea_2570 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001502425.1 3130162 R 398579 CDS YP_001502426.1 157962392 5662964 3131172..3131870 1 NC_009901.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 3131870 5662964 Spea_2571 Shewanella pealeana ATCC 700345 ribonuclease T YP_001502426.1 3131172 D 398579 CDS YP_001502427.1 157962393 5662965 3131978..3132361 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 3132361 5662965 Spea_2572 Shewanella pealeana ATCC 700345 transposase YP_001502427.1 3131978 D 398579 CDS YP_001502428.1 157962394 5662966 3132478..3133206 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 3133206 5662966 Spea_2573 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001502428.1 3132478 D 398579 CDS YP_001502429.1 157962395 5662967 complement(3133262..3133867) 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: slo:Shew_1516 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 3133867 5662967 Spea_2574 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001502429.1 3133262 R 398579 CDS YP_001502430.1 157962396 5662968 3134184..3135503 1 NC_009901.1 PFAM: Gluconate transporter; Citrate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: slo:Shew_1515 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 3135503 5662968 Spea_2575 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001502430.1 3134184 D 398579 CDS YP_001502431.1 157962397 5662969 complement(3135588..3136214) 1 NC_009901.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 3136214 upp 5662969 upp Shewanella pealeana ATCC 700345 uracil phosphoribosyltransferase YP_001502431.1 3135588 R 398579 CDS YP_001502432.1 157962398 5662970 3136435..3137475 1 NC_009901.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 3137475 5662970 Spea_2577 Shewanella pealeana ATCC 700345 phosphoribosylaminoimidazole synthetase YP_001502432.1 3136435 D 398579 CDS YP_001502433.1 157962399 5662971 3137475..3138119 1 NC_009901.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 3138119 purN 5662971 purN Shewanella pealeana ATCC 700345 phosphoribosylglycinamide formyltransferase YP_001502433.1 3137475 D 398579 CDS YP_001502434.1 157962400 5662972 complement(3138527..3140065) 1 NC_009901.1 PFAM: protein of unknown function DUF1214; protein of unknown function DUF1254; KEGG: vha:VIBHAR_02425 hypothetical protein; hypothetical protein 3140065 5662972 Spea_2579 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502434.1 3138527 R 398579 CDS YP_001502435.1 157962401 5662973 complement(3140202..3142163) 1 NC_009901.1 KEGG: ppr:PBPRB0205 hypothetical FOG: GGDEF domain; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; diguanylate cyclase 3142163 5662973 Spea_2580 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502435.1 3140202 R 398579 CDS YP_001502436.1 157962402 5662974 3142705..3143451 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: saz:Sama_2099 NagD protein; UMP phosphatase 3143451 5662974 Spea_2581 Shewanella pealeana ATCC 700345 UMP phosphatase YP_001502436.1 3142705 D 398579 CDS YP_001502437.1 157962403 5662975 3143691..3145349 1 NC_009901.1 PFAM: peptidase M28; KEGG: slo:Shew_1510 peptidase M28; peptidase M28 3145349 5662975 Spea_2582 Shewanella pealeana ATCC 700345 peptidase M28 YP_001502437.1 3143691 D 398579 CDS YP_001502438.1 157962404 5662976 3146167..3147831 1 NC_009901.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 3147831 asnB 5662976 asnB Shewanella pealeana ATCC 700345 asparagine synthetase B YP_001502438.1 3146167 D 398579 CDS YP_001502439.1 157962405 5662977 complement(3147915..3148439) 1 NC_009901.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: slo:Shew_2412 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 3148439 5662977 Spea_2584 Shewanella pealeana ATCC 700345 tRNA/rRNA methyltransferase SpoU YP_001502439.1 3147915 R 398579 CDS YP_001502440.1 157962406 5662978 complement(3148503..3148772) 1 NC_009901.1 PFAM: YfcL protein; KEGG: shm:Shewmr7_1484 hypothetical protein; hypothetical protein 3148772 5662978 Spea_2585 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502440.1 3148503 R 398579 CDS YP_001502441.1 157962407 5662979 complement(3148901..3150022) 1 NC_009901.1 PFAM: ATP-NAD/AcoX kinase; KEGG: sbm:Shew185_2767 ATP-NAD/AcoX kinase; ATP-NAD/AcoX kinase 3150022 5662979 Spea_2586 Shewanella pealeana ATCC 700345 ATP-NAD/AcoX kinase YP_001502441.1 3148901 R 398579 CDS YP_001502442.1 157962408 5662980 complement(3150053..3151216) 1 NC_009901.1 PFAM: nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: sbm:Shew185_2768 major facilitator superfamily MFS_1; major facilitator transporter 3151216 5662980 Spea_2587 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001502442.1 3150053 R 398579 CDS YP_001502443.1 157962409 5662981 complement(3151216..3152310) 1 NC_009901.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3152310 5662981 Spea_2588 Shewanella pealeana ATCC 700345 chorismate synthase YP_001502443.1 3151216 R 398579 CDS YP_001502444.1 157962410 5662982 complement(3152437..3153381) 1 NC_009901.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3153381 5662982 Spea_2589 Shewanella pealeana ATCC 700345 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001502444.1 3152437 R 398579 CDS YP_001502445.1 157962411 5662983 3153461..3153991 1 NC_009901.1 PFAM: Smr protein/MutS2; KEGG: slo:Shew_2418 Smr protein/MutS2; hypothetical protein 3153991 5662983 Spea_2590 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502445.1 3153461 D 398579 CDS YP_001502446.1 157962412 5662984 complement(3154158..3154628) 1 NC_009901.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: slo:Shew_2419 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase SixA 3154628 5662984 Spea_2591 Shewanella pealeana ATCC 700345 phosphohistidine phosphatase SixA YP_001502446.1 3154158 R 398579 CDS YP_001502447.1 157962413 5662985 3154976..3157765 1 NC_009901.1 PFAM: peptidase M16 domain protein; KEGG: slo:Shew_2420 peptidase M16 domain protein; peptidase M16 domain-containing protein 3157765 5662985 Spea_2592 Shewanella pealeana ATCC 700345 peptidase M16 domain-containing protein YP_001502447.1 3154976 D 398579 CDS YP_001502448.1 157962414 5662986 3158031..3162341 1 NC_009901.1 KEGG: slo:Shew_2421 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3162341 5662986 Spea_2593 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001502448.1 3158031 D 398579 CDS YP_001502449.1 157962415 5662987 3162440..3162766 1 NC_009901.1 KEGG: saz:Sama_2165 hypothetical protein; hypothetical protein 3162766 5662987 Spea_2594 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502449.1 3162440 D 398579 CDS YP_001502450.1 157962416 5662988 3162781..3162897 1 NC_009901.1 KEGG: sbm:Shew185_2776 hypothetical protein; hypothetical protein 3162897 5662988 Spea_2595 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502450.1 3162781 D 398579 CDS YP_001502451.1 157962417 5662989 3162925..3163041 1 NC_009901.1 KEGG: sbm:Shew185_2776 hypothetical protein; hypothetical protein 3163041 5662989 Spea_2596 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502451.1 3162925 D 398579 CDS YP_001502452.1 157962418 5662990 complement(3163132..3163329) 1 NC_009901.1 KEGG: slo:Shew_2424 hypothetical protein; hypothetical protein 3163329 5662990 Spea_2597 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502452.1 3163132 R 398579 CDS YP_001502453.1 157962419 5662991 complement(3163542..3165662) 1 NC_009901.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 3165662 fadJ 5662991 fadJ Shewanella pealeana ATCC 700345 multifunctional fatty acid oxidation complex subunit alpha YP_001502453.1 3163542 R 398579 CDS YP_001502454.1 157962420 5662992 complement(3165668..3166978) 1 NC_009901.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 3166978 fadI 5662992 fadI Shewanella pealeana ATCC 700345 3-ketoacyl-CoA thiolase YP_001502454.1 3165668 R 398579 CDS YP_001502455.1 157962421 5662993 3167379..3168335 1 NC_009901.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sbm:Shew185_2782 ATPase associated with various cellular activities AAA_3; ATPase 3168335 5662993 Spea_2600 Shewanella pealeana ATCC 700345 ATPase YP_001502455.1 3167379 D 398579 CDS YP_001502456.1 157962422 5662994 3168335..3169264 1 NC_009901.1 PFAM: protein of unknown function DUF58; KEGG: slo:Shew_2428 protein of unknown function DUF58; hypothetical protein 3169264 5662994 Spea_2601 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502456.1 3168335 D 398579 CDS YP_001502457.1 157962423 5662995 3169265..3169777 1 NC_009901.1 KEGG: slo:Shew_2429 hypothetical protein; hypothetical protein 3169777 5662995 Spea_2602 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502457.1 3169265 D 398579 CDS YP_001502458.1 157962424 5662996 3169771..3170781 1 NC_009901.1 PFAM: von Willebrand factor type A; KEGG: shm:Shewmr7_1468 von Willebrand factor, type A; von Willebrand factor type A 3170781 5662996 Spea_2603 Shewanella pealeana ATCC 700345 von Willebrand factor type A YP_001502458.1 3169771 D 398579 CDS YP_001502459.1 157962425 5662997 3170784..3172745 1 NC_009901.1 PFAM: TPR repeat-containing protein; von Willebrand factor type A; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: spc:Sputcn32_2465 TPR repeat-containing protein; hypothetical protein 3172745 5662997 Spea_2604 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502459.1 3170784 D 398579 CDS YP_001502460.1 157962426 5662998 3172739..3174373 1 NC_009901.1 KEGG: sbm:Shew185_2787 hypothetical protein; hypothetical protein 3174373 5662998 Spea_2605 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502460.1 3172739 D 398579 CDS YP_001502461.1 157962427 5662999 3174628..3175191 1 NC_009901.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3175191 5662999 Spea_2606 Shewanella pealeana ATCC 700345 RNA polymerase sigma factor YP_001502461.1 3174628 D 398579 CDS YP_001502462.1 157962428 5663000 3175184..3175888 1 NC_009901.1 KEGG: slo:Shew_2434 hypothetical protein; hypothetical protein 3175888 5663000 Spea_2607 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502462.1 3175184 D 398579 CDS YP_001502463.1 157962429 5663001 3176029..3177480 1 NC_009901.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: slo:Shew_2435 sodium/proline symporter; sodium/proline symporter 3177480 5663001 Spea_2608 Shewanella pealeana ATCC 700345 sodium/proline symporter YP_001502463.1 3176029 D 398579 CDS YP_001502464.1 157962430 5663002 3177827..3179146 1 NC_009901.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: slo:Shew_2436 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 3179146 5663002 Spea_2609 Shewanella pealeana ATCC 700345 aromatic hydrocarbon degradation membrane protein YP_001502464.1 3177827 D 398579 CDS YP_001502465.1 157962431 5663003 3179409..3180497 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: sbl:Sbal_2774 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3180497 5663003 Spea_2610 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001502465.1 3179409 D 398579 CDS YP_001502466.1 157962432 5663004 3180533..3183817 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_1458 acriflavin resistance protein; acriflavin resistance protein 3183817 5663004 Spea_2611 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001502466.1 3180533 D 398579 CDS YP_001502467.1 157962433 5663005 3183878..3184096 1 NC_009901.1 KEGG: sbm:Shew185_2796 hypothetical protein; hypothetical protein 3184096 5663005 Spea_2612 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502467.1 3183878 D 398579 CDS YP_001502468.1 157962434 5663006 3184121..3184516 1 NC_009901.1 PFAM: Rhodanese domain protein; KEGG: shn:Shewana3_1444 rhodanese domain protein; rhodanese domain-containing protein 3184516 5663006 Spea_2613 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001502468.1 3184121 D 398579 CDS YP_001502469.1 157962435 5663007 3184657..3184974 1 NC_009901.1 KEGG: slo:Shew_2444 hypothetical protein; hypothetical protein 3184974 5663007 Spea_2614 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502469.1 3184657 D 398579 CDS YP_001502470.1 157962436 5663008 complement(3185044..3185856) 1 NC_009901.1 KEGG: sfr:Sfri_2437 hypothetical protein; hypothetical protein 3185856 5663008 Spea_2615 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502470.1 3185044 R 398579 CDS YP_001502471.1 157962437 5663009 complement(3185955..3186584) 1 NC_009901.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 3186584 ribA 5663009 ribA Shewanella pealeana ATCC 700345 GTP cyclohydrolase II YP_001502471.1 3185955 R 398579 CDS YP_001502472.1 157962438 5663010 complement(3186800..3187156) 1 NC_009901.1 KEGG: sdn:Sden_1446 hypothetical protein; hypothetical protein 3187156 5663010 Spea_2617 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502472.1 3186800 R 398579 CDS YP_001502473.1 157962439 5663011 complement(3187312..3187776) 1 NC_009901.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: slo:Shew_2448 anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 3187776 5663011 Spea_2618 Shewanella pealeana ATCC 700345 anaerobic ribonucleoside-triphosphate reductase activating protein YP_001502473.1 3187312 R 398579 CDS YP_001502474.1 157962440 5663012 complement(3187913..3190030) 1 NC_009901.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 3190030 5663012 Spea_2619 Shewanella pealeana ATCC 700345 anaerobic ribonucleoside triphosphate reductase YP_001502474.1 3187913 R 398579 CDS YP_001502475.1 157962441 5663013 complement(3190435..3191115) 1 NC_009901.1 KEGG: sbm:Shew185_1649 hypothetical protein; hypothetical protein 3191115 5663013 Spea_2620 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502475.1 3190435 R 398579 CDS YP_001502476.1 157962442 5663014 complement(3191196..3191660) 1 NC_009901.1 PFAM: regulatory protein MarR; KEGG: slo:Shew_2562 transcriptional regulator, MarR family; MarR family transcriptional regulator 3191660 5663014 Spea_2621 Shewanella pealeana ATCC 700345 MarR family transcriptional regulator YP_001502476.1 3191196 R 398579 CDS YP_001502477.1 157962443 5663015 3191827..3192825 1 NC_009901.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: slo:Shew_2563 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 3192825 5663015 Spea_2622 Shewanella pealeana ATCC 700345 alcohol dehydrogenase YP_001502477.1 3191827 D 398579 CDS YP_001502478.1 157962444 5663016 complement(3193062..3194048) 1 NC_009901.1 PFAM: Patatin; KEGG: son:SO_2836 hypothetical protein; patatin 3194048 5663016 Spea_2623 Shewanella pealeana ATCC 700345 patatin YP_001502478.1 3193062 R 398579 CDS YP_001502479.1 157962445 5663017 3194312..3195658 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: slo:Shew_2452 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3195658 5663017 Spea_2624 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001502479.1 3194312 D 398579 CDS YP_001502480.1 157962446 5663018 3196060..3196503 1 NC_009901.1 KEGG: slo:Shew_2453 hypothetical protein; hypothetical protein 3196503 5663018 Spea_2625 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502480.1 3196060 D 398579 CDS YP_001502481.1 157962447 5663019 3196592..3197098 1 NC_009901.1 PFAM: protein of unknown function DUF45; KEGG: son:SO_2840 hypothetical protein; hypothetical protein 3197098 5663019 Spea_2626 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502481.1 3196592 D 398579 CDS YP_001502482.1 157962448 5663020 3197346..3197744 1 NC_009901.1 KEGG: sbm:Shew185_1642 hypothetical protein; hypothetical protein 3197744 5663020 Spea_2627 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502482.1 3197346 D 398579 CDS YP_001502483.1 157962449 5663021 complement(3198003..3198983) 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_3323 protein of unknown function DUF1568; hypothetical protein 3198983 5663021 Spea_2628 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502483.1 3198003 R 398579 CDS YP_001502484.1 157962450 5663022 complement(3199305..3199577) 1 NC_009901.1 KEGG: sdn:Sden_1131 integron integrase; integron integrase 3199577 5663022 Spea_2629 Shewanella pealeana ATCC 700345 integron integrase YP_001502484.1 3199305 R 398579 CDS YP_001502485.1 157962451 5663023 3199976..3200605 1 NC_009901.1 KEGG: bca:BCE_1012 hypothetical protein; hypothetical protein 3200605 5663023 Spea_2630 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502485.1 3199976 D 398579 CDS YP_001502486.1 157962452 5663024 complement(3201528..3202364) 1 NC_009901.1 PFAM: putative transposase; KEGG: sdn:Sden_1136 transposase; putative transposase 3202364 5663024 Spea_2631 Shewanella pealeana ATCC 700345 putative transposase YP_001502486.1 3201528 R 398579 CDS YP_001502487.1 157962453 5663025 complement(3202856..3204112) 1 NC_009901.1 PFAM: peptidase M23B; Opacity-associated protein A; KEGG: slo:Shew_2455 peptidase M23B; peptidase M23B 3204112 5663025 Spea_2632 Shewanella pealeana ATCC 700345 peptidase M23B YP_001502487.1 3202856 R 398579 CDS YP_001502488.1 157962454 5663026 complement(3204371..3207427) 1 NC_009901.1 PFAM: SMC domain protein; KEGG: sbm:Shew185_1640 SMC domain protein; SMC domain-containing protein 3207427 5663026 Spea_2633 Shewanella pealeana ATCC 700345 SMC domain-containing protein YP_001502488.1 3204371 R 398579 CDS YP_001502489.1 157962455 5663027 complement(3207424..3208569) 1 NC_009901.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: shw:Sputw3181_2568 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 3208569 5663027 Spea_2634 Shewanella pealeana ATCC 700345 nuclease SbcCD subunit D YP_001502489.1 3207424 R 398579 CDS YP_001502490.1 157962456 5663028 3208916..3210166 1 NC_009901.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 3210166 avtA 5663028 avtA Shewanella pealeana ATCC 700345 valine--pyruvate transaminase YP_001502490.1 3208916 D 398579 CDS YP_001502491.1 157962457 5663029 3210593..3214873 1 NC_009901.1 KEGG: ecj:JW5925 predicted inner membrane lipoprotein; inner membrane lipoprotein 3214873 5663029 Spea_2636 Shewanella pealeana ATCC 700345 inner membrane lipoprotein YP_001502491.1 3210593 D 398579 CDS YP_001502492.1 157962458 5663030 complement(3215044..3215883) 1 NC_009901.1 PFAM: penicillin-binding protein transpeptidase; KEGG: syn:slr0319 beta-lactamase; beta-lactamase 3215883 5663030 Spea_2637 Shewanella pealeana ATCC 700345 beta-lactamase YP_001502492.1 3215044 R 398579 CDS YP_001502493.1 157962459 5663031 complement(3215899..3216678) 1 NC_009901.1 PFAM: protein of unknown function DUF81; KEGG: pin:Ping_1433 permease with 5 transmembrane domains; hypothetical protein 3216678 5663031 Spea_2638 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502493.1 3215899 R 398579 CDS YP_001502494.1 157962460 5663032 3216799..3217689 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shw:Sputw3181_2570 transcriptional regulator, LysR family; LysR family transcriptional regulator 3217689 5663032 Spea_2639 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001502494.1 3216799 D 398579 CDS YP_001502495.1 157962461 5663033 complement(3217724..3219697) 1 NC_009901.1 PFAM: NERD domain protein; KEGG: slo:Shew_2466 hypothetical protein; serine/threonine protein kinase 3219697 5663033 Spea_2640 Shewanella pealeana ATCC 700345 serine/threonine protein kinase YP_001502495.1 3217724 R 398579 CDS YP_001502496.1 157962462 5663034 complement(3219813..3220199) 1 NC_009901.1 PFAM: protein of unknown function DUF1260; KEGG: slo:Shew_2467 protein of unknown function DUF1260; hypothetical protein 3220199 5663034 Spea_2641 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502496.1 3219813 R 398579 CDS YP_001502497.1 157962463 5663035 complement(3220219..3220449) 1 NC_009901.1 KEGG: sbm:Shew185_1635 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 3220449 5663035 Spea_2642 Shewanella pealeana ATCC 700345 RNA-binding S4 domain-containing protein YP_001502497.1 3220219 R 398579 CDS YP_001502498.1 157962464 5663036 complement(3220520..3221053) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: slo:Shew_2469 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3221053 5663036 Spea_2643 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502498.1 3220520 R 398579 CDS YP_001502499.1 157962465 5663037 complement(3221088..3221366) 1 NC_009901.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: slo:Shew_2470 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3221366 5663037 Spea_2644 Shewanella pealeana ATCC 700345 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001502499.1 3221088 R 398579 CDS YP_001502500.1 157962466 5663038 complement(3221500..3223332) 1 NC_009901.1 PFAM: protein of unknown function DUF885; KEGG: slo:Shew_2471 protein of unknown function DUF885; hypothetical protein 3223332 5663038 Spea_2645 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502500.1 3221500 R 398579 CDS YP_001502501.1 157962467 5663039 3223402..3223917 1 NC_009901.1 PFAM: GGDEF domain containing protein; KEGG: slo:Shew_2472 diguanylate cyclase; diguanylate cyclase 3223917 5663039 Spea_2646 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502501.1 3223402 D 398579 CDS YP_001502502.1 157962468 5663040 complement(3223991..3225238) 1 NC_009901.1 SMART: Tetratricopeptide domain protein; KEGG: sfr:Sfri_2621 tetratricopeptide domain protein; tetratricopeptide domain-containing protein 3225238 5663040 Spea_2647 Shewanella pealeana ATCC 700345 tetratricopeptide domain-containing protein YP_001502502.1 3223991 R 398579 CDS YP_001502503.1 157962469 5663041 complement(3225241..3225861) 1 NC_009901.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: slo:Shew_2474 TonB family protein; TonB family protein 3225861 5663041 Spea_2648 Shewanella pealeana ATCC 700345 TonB family protein YP_001502503.1 3225241 R 398579 CDS YP_001502504.1 157962470 5663042 complement(3225863..3226267) 1 NC_009901.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbm:Shew185_1628 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3226267 5663042 Spea_2649 Shewanella pealeana ATCC 700345 biopolymer transport protein ExbD/TolR YP_001502504.1 3225863 R 398579 CDS YP_001502505.1 157962471 5663043 complement(3226281..3226805) 1 NC_009901.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbm:Shew185_1627 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3226805 5663043 Spea_2650 Shewanella pealeana ATCC 700345 MotA/TolQ/ExbB proton channel YP_001502505.1 3226281 R 398579 CDS YP_001502506.1 157962472 5663044 complement(3226805..3228160) 1 NC_009901.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: shn:Shewana3_2625 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 3228160 5663044 Spea_2651 Shewanella pealeana ATCC 700345 MotA/TolQ/ExbB proton channel YP_001502506.1 3226805 R 398579 CDS YP_001502507.1 157962473 5663045 complement(3228160..3228942) 1 NC_009901.1 KEGG: saz:Sama_1254 hypothetical protein; hypothetical protein 3228942 5663045 Spea_2652 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502507.1 3228160 R 398579 CDS YP_001502508.1 157962474 5663046 complement(3229718..3232564) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: xft:PD1283 TonB-dependent receptor; TonB-dependent receptor 3232564 5663046 Spea_2653 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001502508.1 3229718 R 398579 CDS YP_001502509.1 157962475 5663047 complement(3233401..3234612) 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_2481 porin, gram-negative type; porin 3234612 5663047 Spea_2654 Shewanella pealeana ATCC 700345 porin YP_001502509.1 3233401 R 398579 CDS YP_001502510.1 157962476 5663048 complement(3234846..3237245) 1 NC_009901.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 3237245 5663048 Spea_2655 Shewanella pealeana ATCC 700345 DNA polymerase II YP_001502510.1 3234846 R 398579 CDS YP_001502511.1 157962477 5663049 3237346..3239418 1 NC_009901.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 3239418 dinG 5663049 dinG Shewanella pealeana ATCC 700345 ATP-dependent DNA helicase DinG YP_001502511.1 3237346 D 398579 CDS YP_001502512.1 157962478 5663050 3239427..3240200 1 NC_009901.1 PFAM: protein of unknown function DUF81; KEGG: slo:Shew_2484 protein of unknown function DUF81; hypothetical protein 3240200 5663050 Spea_2657 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502512.1 3239427 D 398579 CDS YP_001502513.1 157962479 5663051 3240197..3240859 1 NC_009901.1 KEGG: slo:Shew_2485 primosomal replication protein N'', putative; primosomal replication protein N'' 3240859 5663051 Spea_2658 Shewanella pealeana ATCC 700345 primosomal replication protein N'' YP_001502513.1 3240197 D 398579 CDS YP_001502514.1 157962480 5663052 3240869..3241579 1 NC_009901.1 KEGG: she:Shewmr4_2473 hypothetical protein; hypothetical protein 3241579 5663052 Spea_2659 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502514.1 3240869 D 398579 CDS YP_001502515.1 157962481 5663053 3241610..3242524 1 NC_009901.1 PFAM: histone deacetylase superfamily; KEGG: she:Shewmr4_2474 histone deacetylase superfamily; histone deacetylase superfamily protein 3242524 5663053 Spea_2660 Shewanella pealeana ATCC 700345 histone deacetylase superfamily protein YP_001502515.1 3241610 D 398579 CDS YP_001502516.1 157962482 5663054 3242568..3242828 1 NC_009901.1 KEGG: shn:Shewana3_2635 hypothetical protein; hypothetical protein 3242828 5663054 Spea_2661 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502516.1 3242568 D 398579 CDS YP_001502517.1 157962483 5664792 complement(3244655..3244972) 1 NC_009901.1 KEGG: slo:Shew_2489 competence protein ComEA helix-hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; helix-hairpin-helix repeat-containing competence protein ComEA 3244972 5664792 Spea_2662 Shewanella pealeana ATCC 700345 helix-hairpin-helix repeat-containing competence protein ComEA YP_001502517.1 3244655 R 398579 CDS YP_001502518.1 157962484 5663056 3245360..3246754 1 NC_009901.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: slo:Shew_2490 anion transporter; anion transporter 3246754 5663056 Spea_2663 Shewanella pealeana ATCC 700345 anion transporter YP_001502518.1 3245360 D 398579 CDS YP_001502519.1 157962485 5663057 complement(3246844..3248025) 1 NC_009901.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: slo:Shew_2491 methionine gamma-lyase; cystathionine gamma-synthase 3248025 5663057 Spea_2664 Shewanella pealeana ATCC 700345 cystathionine gamma-synthase YP_001502519.1 3246844 R 398579 CDS YP_001502520.1 157962486 5663058 complement(3248391..3249503) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: sbl:Sbal_1621 conserved hypothetical protein 1620; hypothetical protein 3249503 5663058 Spea_2665 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502520.1 3248391 R 398579 CDS YP_001502521.1 157962487 5663059 complement(3249524..3250969) 1 NC_009901.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: slo:Shew_2493 protein of unknown function DUF463, YcjX family protein; hypothetical protein 3250969 5663059 Spea_2666 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502521.1 3249524 R 398579 CDS YP_001502522.1 157962488 5663060 complement(3251046..3251435) 1 NC_009901.1 TIGRFAM: shock protein C; PFAM: PspC domain protein; KEGG: slo:Shew_2494 phage shock protein C, PspC; phage shock protein C 3251435 5663060 Spea_2667 Shewanella pealeana ATCC 700345 phage shock protein C YP_001502522.1 3251046 R 398579 CDS YP_001502523.1 157962489 5663061 complement(3251503..3251730) 1 NC_009901.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B 3251730 pspB 5663061 pspB Shewanella pealeana ATCC 700345 phage shock protein B YP_001502523.1 3251503 R 398579 CDS YP_001502524.1 157962490 5663062 complement(3251759..3252436) 1 NC_009901.1 TIGRFAM: shock protein A; PFAM: PspA/IM30 family protein; KEGG: slo:Shew_2496 phage shock protein A, PspA; phage shock protein A 3252436 5663062 Spea_2669 Shewanella pealeana ATCC 700345 phage shock protein A YP_001502524.1 3251759 R 398579 CDS YP_001502525.1 157962491 5663063 3252614..3253714 1 NC_009901.1 KEGG: slo:Shew_2497 sigma54 specific transcriptional regulator, fis family; TIGRFAM: Transcriptional activator PspF; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Fis family transcriptional regulator 3253714 5663063 Spea_2670 Shewanella pealeana ATCC 700345 Fis family transcriptional regulator YP_001502525.1 3252614 D 398579 CDS YP_001502526.1 157962492 5663064 3253779..3255407 1 NC_009901.1 PFAM: extracellular solute-binding protein family 5; KEGG: slo:Shew_2498 extracellular solute-binding protein, family 5; extracellular solute-binding protein 3255407 5663064 Spea_2671 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001502526.1 3253779 D 398579 CDS YP_001502527.1 157962493 5663065 3255407..3256438 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_2499 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3256438 5663065 Spea_2672 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001502527.1 3255407 D 398579 CDS YP_001502528.1 157962494 5663066 3256425..3257315 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_2500 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3257315 5663066 Spea_2673 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001502528.1 3256425 D 398579 CDS YP_001502529.1 157962495 5663067 3257320..3258327 1 NC_009901.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: spc:Sputcn32_1497 oligopeptide/dipeptide ABC transporter, ATPase subunit; oligopeptide/dipeptide ABC transporter ATPase 3258327 5663067 Spea_2674 Shewanella pealeana ATCC 700345 oligopeptide/dipeptide ABC transporter ATPase YP_001502529.1 3257320 D 398579 CDS YP_001502530.1 157962496 5663068 3258308..3259093 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_2556 ABC transporter related; ABC transporter-like protein 3259093 5663068 Spea_2675 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001502530.1 3258308 D 398579 CDS YP_001502531.1 157962497 5663069 3259273..3260475 1 NC_009901.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 3260475 5663069 Spea_2676 Shewanella pealeana ATCC 700345 trans-2-enoyl-CoA reductase YP_001502531.1 3259273 D 398579 CDS YP_001502532.1 157962498 5663070 complement(3261119..3262984) 1 NC_009901.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sbm:Shew185_1597 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3262984 5663070 Spea_2677 Shewanella pealeana ATCC 700345 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001502532.1 3261119 R 398579 CDS YP_001502533.1 157962499 5663071 complement(3263202..3263474) 1 NC_009901.1 PFAM: histone family protein DNA-binding protein; KEGG: sfr:Sfri_2593 histone family protein DNA-binding protein; histone family protein DNA-binding protein 3263474 5663071 Spea_2678 Shewanella pealeana ATCC 700345 histone family protein DNA-binding protein YP_001502533.1 3263202 R 398579 CDS YP_001502534.1 157962500 5663072 complement(3263731..3266088) 1 NC_009901.1 KEGG: slo:Shew_2506 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent protease La 3266088 5663072 Spea_2679 Shewanella pealeana ATCC 700345 ATP-dependent protease La YP_001502534.1 3263731 R 398579 CDS YP_001502535.1 157962501 5663073 complement(3266237..3267514) 1 NC_009901.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 3267514 clpX 5663073 clpX Shewanella pealeana ATCC 700345 ATP-dependent protease ATP-binding subunit ClpX YP_001502535.1 3266237 R 398579 CDS YP_001502536.1 157962502 5663074 complement(3267599..3268210) 1 NC_009901.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 3268210 clpP 5663074 clpP Shewanella pealeana ATCC 700345 ATP-dependent Clp protease proteolytic subunit YP_001502536.1 3267599 R 398579 CDS YP_001502537.1 157962503 5663075 complement(3268300..3269604) 1 NC_009901.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 3269604 tig 5663075 tig Shewanella pealeana ATCC 700345 trigger factor YP_001502537.1 3268300 R 398579 CDS YP_001502538.1 157962504 5664795 3270626..3271480 1 NC_009901.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 3271480 5664795 Spea_2683 Shewanella pealeana ATCC 700345 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001502538.1 3270626 D 398579 CDS YP_001502539.1 157962505 5663077 complement(3271676..3273055) 1 NC_009901.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 3273055 cysS 5663077 cysS Shewanella pealeana ATCC 700345 cysteinyl-tRNA synthetase YP_001502539.1 3271676 R 398579 CDS YP_001502540.1 157962506 5663078 3273368..3273862 1 NC_009901.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: slo:Shew_2512 peptidylprolyl isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 3273862 5663078 Spea_2685 Shewanella pealeana ATCC 700345 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001502540.1 3273368 D 398579 CDS YP_001502541.1 157962507 5663079 3273873..3274589 1 NC_009901.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 3274589 5663079 Spea_2686 Shewanella pealeana ATCC 700345 UDP-2,3-diacylglucosamine hydrolase YP_001502541.1 3273873 D 398579 CDS YP_001502542.1 157962508 5663080 complement(3274656..3275438) 1 NC_009901.1 PFAM: tRNA--hydroxylase; KEGG: slo:Shew_2514 tRNA--hydroxylase; tRNA--hydroxylase 3275438 5663080 Spea_2687 Shewanella pealeana ATCC 700345 tRNA--hydroxylase YP_001502542.1 3274656 R 398579 CDS YP_001502543.1 157962509 5663081 3275646..3276242 1 NC_009901.1 PFAM: protein of unknown function DUF1282; KEGG: shw:Sputw3181_2618 protein of unknown function DUF1282; hypothetical protein 3276242 5663081 Spea_2688 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502543.1 3275646 D 398579 CDS YP_001502544.1 157962510 5663082 complement(3276320..3277990) 1 NC_009901.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 3277990 5663082 Spea_2689 Shewanella pealeana ATCC 700345 glutaminyl-tRNA synthetase YP_001502544.1 3276320 R 398579 CDS YP_001502545.1 157962511 5663083 complement(3278172..3280466) 1 NC_009901.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: slo:Shew_2517 ferrous iron transport protein B; ferrous iron transport protein B 3280466 5663083 Spea_2690 Shewanella pealeana ATCC 700345 ferrous iron transport protein B YP_001502545.1 3278172 R 398579 CDS YP_001502546.1 157962512 5663084 complement(3280459..3280698) 1 NC_009901.1 PFAM: FeoA family protein; KEGG: shw:Sputw3181_2621 FeoA family protein; FeoA family protein 3280698 5663084 Spea_2691 Shewanella pealeana ATCC 700345 FeoA family protein YP_001502546.1 3280459 R 398579 CDS YP_001502547.1 157962513 5663085 3281121..3282080 1 NC_009901.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: slo:Shew_2519 cytochrome c family protein; cytochrome C family protein 3282080 5663085 Spea_2692 Shewanella pealeana ATCC 700345 cytochrome C family protein YP_001502547.1 3281121 D 398579 CDS YP_001502548.1 157962514 5663086 3282096..3284216 1 NC_009901.1 KEGG: slo:Shew_2520 outer membrane protein, putative; outer membrane protein 3284216 5663086 Spea_2693 Shewanella pealeana ATCC 700345 outer membrane protein YP_001502548.1 3282096 D 398579 CDS YP_001502549.1 157962515 5663087 3284311..3286233 1 NC_009901.1 KEGG: slo:Shew_2521 decaheme cytochrome c MtrF; decaheme cytochrome c MtrF 3286233 5663087 Spea_2694 Shewanella pealeana ATCC 700345 decaheme cytochrome c MtrF YP_001502549.1 3284311 D 398579 CDS YP_001502550.1 157962516 5663088 3286358..3288517 1 NC_009901.1 KEGG: slo:Shew_2522 decaheme cytochrome c; decaheme cytochrome c 3288517 5663088 Spea_2695 Shewanella pealeana ATCC 700345 decaheme cytochrome c YP_001502550.1 3286358 D 398579 CDS YP_001502551.1 157962517 5663089 3289024..3291492 1 NC_009901.1 KEGG: spc:Sputcn32_1479 hypothetical protein; hypothetical protein 3291492 5663089 Spea_2696 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502551.1 3289024 D 398579 CDS YP_001502552.1 157962518 5663090 3291948..3294185 1 NC_009901.1 KEGG: son:SO_1779 decaheme cytochrome c; decaheme cytochrome c 3294185 5663090 Spea_2697 Shewanella pealeana ATCC 700345 decaheme cytochrome c YP_001502552.1 3291948 D 398579 CDS YP_001502553.1 157962519 5663091 3294567..3296582 1 NC_009901.1 KEGG: sfr:Sfri_2637 decaheme cytochrome c; decaheme cytochrome c 3296582 5663091 Spea_2698 Shewanella pealeana ATCC 700345 decaheme cytochrome c YP_001502553.1 3294567 D 398579 CDS YP_001502554.1 157962520 5663092 3296698..3297684 1 NC_009901.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: slo:Shew_2526 cytochrome c family protein; cytochrome C family protein 3297684 5663092 Spea_2699 Shewanella pealeana ATCC 700345 cytochrome C family protein YP_001502554.1 3296698 D 398579 CDS YP_001502555.1 157962521 5663093 3297697..3299796 1 NC_009901.1 KEGG: slo:Shew_2527 outer membrane protein precursor MtrB; outer membrane protein MtrB 3299796 5663093 Spea_2700 Shewanella pealeana ATCC 700345 outer membrane protein MtrB YP_001502555.1 3297697 D 398579 CDS YP_001502556.1 157962522 5663094 3300658..3301236 1 NC_009901.1 KEGG: sbl:Sbal_1586 hypothetical protein; hypothetical protein 3301236 5663094 Spea_2701 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502556.1 3300658 D 398579 CDS YP_001502557.1 157962523 5663095 3301259..3301861 1 NC_009901.1 KEGG: saz:Sama_1203 hypothetical protein; hypothetical protein 3301861 5663095 Spea_2702 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502557.1 3301259 D 398579 CDS YP_001502558.1 157962524 5663096 3302028..3303179 1 NC_009901.1 PFAM: sugar diacid recognition domain protein; KEGG: slo:Shew_2528 transcriptional regulator, CdaR; transcriptional regulator CdaR 3303179 5663096 Spea_2703 Shewanella pealeana ATCC 700345 transcriptional regulator CdaR YP_001502558.1 3302028 D 398579 CDS YP_001502559.1 157962525 5663097 3303193..3303729 1 NC_009901.1 KEGG: vch:VC0502 type IV pilin, putative; type IV pilin 3303729 5663097 Spea_2704 Shewanella pealeana ATCC 700345 type IV pilin YP_001502559.1 3303193 D 398579 CDS YP_001502560.1 157962526 5663098 complement(3303792..3304766) 1 NC_009901.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: vpa:VPA0248 putative outer membrane protein OmpA; OmpA/MotB domain-containing protein 3304766 5663098 Spea_2705 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001502560.1 3303792 R 398579 CDS YP_001502561.1 157962527 5663099 complement(3304763..3305872) 1 NC_009901.1 KEGG: vha:VIBHAR_05979 hypothetical protein; hypothetical protein 3305872 5663099 Spea_2706 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502561.1 3304763 R 398579 CDS YP_001502562.1 157962528 5663100 complement(3305874..3306599) 1 NC_009901.1 KEGG: shm:Shewmr7_2311 hypothetical protein; hypothetical protein 3306599 5663100 Spea_2707 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502562.1 3305874 R 398579 CDS YP_001502563.1 157962529 5663101 complement(3306603..3309536) 1 NC_009901.1 KEGG: sbm:Shew185_0590 P pilus assembly protein porin PapC-like protein; hypothetical protein 3309536 5663101 Spea_2708 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502563.1 3306603 R 398579 CDS YP_001502564.1 157962530 5663102 complement(3309533..3310066) 1 NC_009901.1 hypothetical protein 3310066 5663102 Spea_2709 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502564.1 3309533 R 398579 CDS YP_001502565.1 157962531 5663103 complement(3310103..3310681) 1 NC_009901.1 hypothetical protein 3310681 5663103 Spea_2710 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502565.1 3310103 R 398579 CDS YP_001502566.1 157962532 5663104 complement(3311107..3314004) 1 NC_009901.1 KEGG: vha:VIBHAR_05990 hypothetical protein; hypothetical protein 3314004 5663104 Spea_2711 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502566.1 3311107 R 398579 CDS YP_001502567.1 157962533 5663105 complement(3314328..3315257) 1 NC_009901.1 KEGG: vha:VIBHAR_02615 hypothetical protein; hypothetical protein 3315257 5663105 Spea_2712 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502567.1 3314328 R 398579 CDS YP_001502568.1 157962534 5663106 3315554..3316912 1 NC_009901.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: slo:Shew_2533 gluconate transporter; gluconate transporter 3316912 5663106 Spea_2713 Shewanella pealeana ATCC 700345 gluconate transporter YP_001502568.1 3315554 D 398579 CDS YP_001502569.1 157962535 5663107 3317068..3318222 1 NC_009901.1 PFAM: glycerate kinase; KEGG: slo:Shew_2534 glycerate kinase; glycerate kinase 3318222 5663107 Spea_2714 Shewanella pealeana ATCC 700345 glycerate kinase YP_001502569.1 3317068 D 398579 CDS YP_001502570.1 157962536 5663108 3318677..3320323 1 NC_009901.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: slo:Shew_2535 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 3320323 5663108 Spea_2715 Shewanella pealeana ATCC 700345 pyridoxal-dependent decarboxylase YP_001502570.1 3318677 D 398579 CDS YP_001502571.1 157962537 5663109 complement(3320424..3321974) 1 NC_009901.1 KEGG: vpa:VP1633 putative RTX toxin; hypothetical protein 3321974 5663109 Spea_2716 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502571.1 3320424 R 398579 CDS YP_001502572.1 157962538 5663110 complement(3322370..3323242) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: cps:CPS_4655 transcriptional regulator, AraC family; AraC family transcriptional regulator 3323242 5663110 Spea_2717 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001502572.1 3322370 R 398579 CDS YP_001502573.1 157962539 5663111 3323498..3323869 1 NC_009901.1 hypothetical protein 3323869 5663111 Spea_2718 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502573.1 3323498 D 398579 CDS YP_001502574.1 157962540 5663112 complement(3323983..3325482) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mmw:Mmwyl1_1752 diguanylate cyclase/phosphodiesterase; diguanylate cyclase 3325482 5663112 Spea_2719 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502574.1 3323983 R 398579 CDS YP_001502575.1 157962541 5663113 complement(3325479..3326480) 1 NC_009901.1 PFAM: basic membrane lipoprotein; KEGG: hch:HCH_02309 uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein; basic membrane lipoprotein 3326480 5663113 Spea_2720 Shewanella pealeana ATCC 700345 basic membrane lipoprotein YP_001502575.1 3325479 R 398579 CDS YP_001502576.1 157962542 5663114 3327746..3328504 1 NC_009901.1 hypothetical protein 3328504 5663114 Spea_2721 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502576.1 3327746 D 398579 CDS YP_001502577.1 157962543 5663115 3328529..3329527 1 NC_009901.1 hypothetical protein 3329527 5663115 Spea_2722 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502577.1 3328529 D 398579 CDS YP_001502578.1 157962544 5663116 3329500..3330129 1 NC_009901.1 KEGG: mmw:Mmwyl1_1032 hypothetical protein; hypothetical protein 3330129 5663116 Spea_2723 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502578.1 3329500 D 398579 CDS YP_001502579.1 157962545 5663117 3330191..3331750 1 NC_009901.1 PFAM: Lytic transglycosylase catalytic; KEGG: pha:PSHAb0242 putative transglycosylase; lytic transglycosylase 3331750 5663117 Spea_2724 Shewanella pealeana ATCC 700345 lytic transglycosylase YP_001502579.1 3330191 D 398579 CDS YP_001502580.1 157962546 5663118 3331771..3331941 1 NC_009901.1 KEGG: vfi:VFA0327 hypothetical protein; hypothetical protein 3331941 5663118 Spea_2725 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502580.1 3331771 D 398579 CDS YP_001502581.1 157962547 5663119 3331944..3332681 1 NC_009901.1 KEGG: pha:PSHAb0243 putative orphan protein; hypothetical protein 3332681 5663119 Spea_2726 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502581.1 3331944 D 398579 CDS YP_001502582.1 157962548 5663120 complement(3332821..3334554) 1 NC_009901.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: sbl:Sbal_1561 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase subunit alpha/beta 3334554 5663120 Spea_2727 Shewanella pealeana ATCC 700345 phosphoglucomutase/phosphomannomutase subunit alpha/beta YP_001502582.1 3332821 R 398579 CDS YP_001502583.1 157962549 5663121 3334779..3335696 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: sfr:Sfri_0787 pseudouridine synthase; pseudouridine synthase 3335696 5663121 Spea_2728 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001502583.1 3334779 D 398579 CDS YP_001502584.1 157962550 5663122 complement(3335785..3336525) 1 NC_009901.1 PFAM: cytochrome B561; KEGG: slo:Shew_2692 cytochrome b561; cytochrome B561 3336525 5663122 Spea_2729 Shewanella pealeana ATCC 700345 cytochrome B561 YP_001502584.1 3335785 R 398579 CDS YP_001502585.1 157962551 5663123 complement(3336732..3337397) 1 NC_009901.1 PFAM: Glutathione S-transferase domain; KEGG: sfr:Sfri_2500 glutathione S-transferase, C-terminal domain protein; glutathione S-transferase domain-containing protein 3337397 5663123 Spea_2730 Shewanella pealeana ATCC 700345 glutathione S-transferase domain-containing protein YP_001502585.1 3336732 R 398579 CDS YP_001502586.1 157962552 5663124 3337602..3338450 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sfr:Sfri_2100 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 3338450 5663124 Spea_2731 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001502586.1 3337602 D 398579 CDS YP_001502587.1 157962553 5663125 complement(3338526..3338975) 1 NC_009901.1 KEGG: sbm:Shew185_1552 hypothetical protein; hypothetical protein 3338975 5663125 Spea_2732 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502587.1 3338526 R 398579 CDS YP_001502588.1 157962554 5663126 complement(3339271..3340413) 1 NC_009901.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: sfr:Sfri_1368 3-beta hydroxysteroid dehydrogenase/isomerase; 3-beta hydroxysteroid dehydrogenase/isomerase 3340413 5663126 Spea_2733 Shewanella pealeana ATCC 700345 3-beta hydroxysteroid dehydrogenase/isomerase YP_001502588.1 3339271 R 398579 CDS YP_001502589.1 157962555 5663127 complement(3340420..3342141) 1 NC_009901.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 3342141 5663127 Spea_2734 Shewanella pealeana ATCC 700345 peptide synthase YP_001502589.1 3340420 R 398579 CDS YP_001502590.1 157962556 5663128 complement(3342147..3343052) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: sbm:Shew185_1547 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3343052 5663128 Spea_2735 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001502590.1 3342147 R 398579 CDS YP_001502591.1 157962557 5663129 complement(3343143..3344192) 1 NC_009901.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 3344192 5663129 Spea_2736 Shewanella pealeana ATCC 700345 3-oxoacyl-ACP synthase YP_001502591.1 3343143 R 398579 CDS YP_001502592.1 157962558 5663130 complement(3344453..3345874) 1 NC_009901.1 KEGG: spc:Sputcn32_1444 hypothetical protein; hypothetical protein 3345874 5663130 Spea_2737 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502592.1 3344453 R 398579 CDS YP_001502593.1 157962559 5663131 complement(3345901..3347091) 1 NC_009901.1 KEGG: slo:Shew_1711 conserved hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 3347091 5663131 Spea_2738 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis protein YP_001502593.1 3345901 R 398579 CDS YP_001502594.1 157962560 5663132 3347332..3347583 1 NC_009901.1 PFAM: protein of unknown function DUF1289; KEGG: slo:Shew_1710 protein of unknown function DUF1289; hypothetical protein 3347583 5663132 Spea_2739 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502594.1 3347332 D 398579 CDS YP_001502595.1 157962561 5663133 complement(3347630..3348004) 1 NC_009901.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: slo:Shew_1709 HNH nuclease; hypothetical protein 3348004 5663133 Spea_2740 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502595.1 3347630 R 398579 CDS YP_001502596.1 157962562 5663134 complement(3348453..3350438) 1 NC_009901.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: sbm:Shew185_1542 choline/carnitine/betaine transporter; choline/carnitine/betaine transporter 3350438 5663134 Spea_2741 Shewanella pealeana ATCC 700345 choline/carnitine/betaine transporter YP_001502596.1 3348453 R 398579 CDS YP_001502597.1 157962563 5663135 complement(3351012..3351722) 1 NC_009901.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 3351722 5663135 Spea_2742 Shewanella pealeana ATCC 700345 transcriptional regulator PhoU YP_001502597.1 3351012 R 398579 CDS YP_001502598.1 157962564 5663136 complement(3351744..3352562) 1 NC_009901.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 3352562 5663136 Spea_2743 Shewanella pealeana ATCC 700345 phosphate transporter ATP-binding protein YP_001502598.1 3351744 R 398579 CDS YP_001502599.1 157962565 5663137 complement(3352594..3354246) 1 NC_009901.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_1699 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 3354246 5663137 Spea_2744 Shewanella pealeana ATCC 700345 phosphate ABC transporter permease YP_001502599.1 3352594 R 398579 CDS YP_001502600.1 157962566 5663138 complement(3354333..3356588) 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_1698 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 3356588 5663138 Spea_2745 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001502600.1 3354333 R 398579 CDS YP_001502601.1 157962567 5663139 3356864..3357364 1 NC_009901.1 PFAM: amino acid-binding ACT domain protein; KEGG: slo:Shew_1697 amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 3357364 5663139 Spea_2746 Shewanella pealeana ATCC 700345 amino acid-binding ACT domain-containing protein YP_001502601.1 3356864 D 398579 CDS YP_001502602.1 157962568 5663140 complement(3357452..3358237) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sde:Sde_2463 response regulator receiver domain protein (CheY-like); diguanylate cyclase 3358237 5663140 Spea_2747 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502602.1 3357452 R 398579 CDS YP_001502603.1 157962569 5663141 complement(3358517..3359419) 1 NC_009901.1 PFAM: regulatory protein LysR; KEGG: vco:VC0395_A0310 transcriptional regulator, LysR family; LysR family transcriptional regulator 3359419 5663141 Spea_2748 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001502603.1 3358517 R 398579 CDS YP_001502604.1 157962570 5663142 3359535..3360245 1 NC_009901.1 hypothetical protein 3360245 5663142 Spea_2749 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502604.1 3359535 D 398579 CDS YP_001502605.1 157962571 5663143 complement(3360516..3361742) 1 NC_009901.1 KEGG: vpa:VPA0990 hypothetical protein; hypothetical protein 3361742 5663143 Spea_2750 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502605.1 3360516 R 398579 CDS YP_001502606.1 157962572 5663144 3362314..3363132 1 NC_009901.1 PFAM: glycoside hydrolase family 16; KEGG: cac:CAC2807 endo-1,3(4)-beta-glucanase family 16; glycoside hydrolase family protein 3363132 5663144 Spea_2751 Shewanella pealeana ATCC 700345 glycoside hydrolase family protein YP_001502606.1 3362314 D 398579 CDS YP_001502607.1 157962573 5663145 3363498..3364316 1 NC_009901.1 KEGG: shn:Shewana3_2738 hypothetical protein; hypothetical protein 3364316 5663145 Spea_2752 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502607.1 3363498 D 398579 CDS YP_001502608.1 157962574 5663146 complement(3364417..3364947) 1 NC_009901.1 KEGG: shn:Shewana3_2741 hypothetical protein; hypothetical protein 3364947 5663146 Spea_2753 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502608.1 3364417 R 398579 CDS YP_001502609.1 157962575 5663147 complement(3365183..3368101) 1 NC_009901.1 PFAM: Thrombospondin type 3 repeat; peptidase domain protein; Peptidase M9A collagenase domain protein; Peptidase M9 domain; KEGG: slo:Shew_1685 microbial collagenase; collagenase 3368101 5663147 Spea_2754 Shewanella pealeana ATCC 700345 collagenase YP_001502609.1 3365183 R 398579 CDS YP_001502610.1 157962576 5663148 3368886..3369479 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: slo:Shew_1684 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 3369479 5663148 Spea_2755 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001502610.1 3368886 D 398579 CDS YP_001502611.1 157962577 5663149 3369500..3370066 1 NC_009901.1 PFAM: protein of unknown function DUF1415; KEGG: shw:Sputw3181_2672 protein of unknown function DUF1415; hypothetical protein 3370066 5663149 Spea_2756 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502611.1 3369500 D 398579 CDS YP_001502612.1 157962578 5663150 3370138..3370902 1 NC_009901.1 PFAM: ribonuclease H; KEGG: sdn:Sden_0758 ribonuclease H; ribonuclease H 3370902 5663150 Spea_2757 Shewanella pealeana ATCC 700345 ribonuclease H YP_001502612.1 3370138 D 398579 CDS YP_001502613.1 157962579 5663151 3370984..3371403 1 NC_009901.1 KEGG: slo:Shew_1678 hypothetical protein; hypothetical protein 3371403 5663151 Spea_2758 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502613.1 3370984 D 398579 CDS YP_001502614.1 157962580 5663152 3371557..3372918 1 NC_009901.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: slo:Shew_1677 leucyl aminopeptidase; leucyl aminopeptidase 3372918 5663152 Spea_2759 Shewanella pealeana ATCC 700345 leucyl aminopeptidase YP_001502614.1 3371557 D 398579 CDS YP_001502615.1 157962581 5663153 3373287..3374360 1 NC_009901.1 KEGG: slo:Shew_0274 hypothetical protein; hypothetical protein 3374360 5663153 Spea_2760 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502615.1 3373287 D 398579 CDS YP_001502616.1 157962582 5663154 3374543..3374851 1 NC_009901.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: vco:VC0395_0290 hypothetical protein; transcriptional antiterminator Rof 3374851 5663154 Spea_2761 Shewanella pealeana ATCC 700345 transcriptional antiterminator Rof YP_001502616.1 3374543 D 398579 CDS YP_001502617.1 157962583 5663155 3375009..3375488 1 NC_009901.1 KEGG: tcx:Tcr_1988 hypothetical protein; hypothetical protein 3375488 5663155 Spea_2762 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502617.1 3375009 D 398579 CDS YP_001502618.1 157962584 5663156 complement(3375598..3376806) 1 NC_009901.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: ppr:PBPRB1458 putative NupC family protein (permease); nucleoside transporter 3376806 5663156 Spea_2763 Shewanella pealeana ATCC 700345 nucleoside transporter YP_001502618.1 3375598 R 398579 CDS YP_001502619.1 157962585 5663157 complement(3377256..3378335) 1 NC_009901.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: vfi:VFA0483 rod shape-determining protein RodA; rod shape-determining protein RodA 3378335 5663157 Spea_2764 Shewanella pealeana ATCC 700345 rod shape-determining protein RodA YP_001502619.1 3377256 R 398579 CDS YP_001502620.1 157962586 5663158 complement(3378678..3379634) 1 NC_009901.1 PFAM: UspA domain protein; KEGG: vch:VCA0159 hypothetical protein; UspA domain-containing protein 3379634 5663158 Spea_2765 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001502620.1 3378678 R 398579 CDS YP_001502621.1 157962587 5663159 complement(3380079..3380564) 1 NC_009901.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppr:PBPRA1446 putative lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase 3380564 5663159 Spea_2766 Shewanella pealeana ATCC 700345 glyoxalase/bleomycin resistance protein/dioxygenase YP_001502621.1 3380079 R 398579 CDS YP_001502622.1 157962588 5663160 3381009..3381653 1 NC_009901.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: vha:VIBHAR_04811 hypothetical protein; resolvase domain-containing protein 3381653 5663160 Spea_2767 Shewanella pealeana ATCC 700345 resolvase domain-containing protein YP_001502622.1 3381009 D 398579 CDS YP_001502623.1 157962589 5663161 3381662..3382861 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: vha:VIBHAR_04810 hypothetical protein; major facilitator transporter 3382861 5663161 Spea_2768 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001502623.1 3381662 D 398579 CDS YP_001502624.1 157962590 5663162 complement(3383175..3384068) 1 NC_009901.1 PFAM: AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB0725 hypothetical protein; AraC family transcriptional regulator 3384068 5663162 Spea_2769 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001502624.1 3383175 R 398579 CDS YP_001502625.1 157962591 5663163 complement(3384155..3385714) 1 NC_009901.1 KEGG: rpd:RPD_2526 tetratricopeptide TPR_2; hypothetical protein 3385714 5663163 Spea_2770 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502625.1 3384155 R 398579 CDS YP_001502626.1 157962592 5663164 complement(3386233..3387801) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_1676 ABC transporter-related protein; ABC transporter-like protein 3387801 5663164 Spea_2771 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001502626.1 3386233 R 398579 CDS YP_001502627.1 157962593 5663165 complement(3388128..3390401) 1 NC_009901.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: shn:Shewana3_2761 copper-translocating P-type ATPase; copper-translocating P-type ATPase 3390401 5663165 Spea_2772 Shewanella pealeana ATCC 700345 copper-translocating P-type ATPase YP_001502627.1 3388128 R 398579 CDS YP_001502628.1 157962594 5663166 3390501..3390899 1 NC_009901.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: she:Shewmr4_2588 transcriptional regulator, MerR family; MerR family transcriptional regulator 3390899 5663166 Spea_2773 Shewanella pealeana ATCC 700345 MerR family transcriptional regulator YP_001502628.1 3390501 D 398579 CDS YP_001502629.1 157962595 5663167 complement(3390905..3392938) 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: she:Shewmr4_2589 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 3392938 5663167 Spea_2774 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001502629.1 3390905 R 398579 CDS YP_001502630.1 157962596 5663168 complement(3393056..3393283) 1 NC_009901.1 KEGG: shw:Sputw3181_2696 hypothetical protein; hypothetical protein 3393283 5663168 Spea_2775 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502630.1 3393056 R 398579 CDS YP_001502631.1 157962597 5663169 complement(3393456..3393581) 1 NC_009901.1 KEGG: shn:Shewana3_2765 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3393581 5663169 Spea_2776 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001502631.1 3393456 R 398579 CDS YP_001502632.1 157962598 5663170 complement(3393612..3394370) 1 NC_009901.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 3394370 fabG 5663170 fabG Shewanella pealeana ATCC 700345 3-ketoacyl-ACP reductase YP_001502632.1 3393612 R 398579 CDS YP_001502633.1 157962599 5663171 complement(3394375..3395304) 1 NC_009901.1 KEGG: slo:Shew_1672 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 3395304 5663171 Spea_2778 Shewanella pealeana ATCC 700345 3-hydroxyisobutyrate dehydrogenase YP_001502633.1 3394375 R 398579 CDS YP_001502634.1 157962600 5663172 complement(3395395..3396573) 1 NC_009901.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: slo:Shew_1671 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3396573 5663172 Spea_2779 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase/isomerase YP_001502634.1 3395395 R 398579 CDS YP_001502635.1 157962601 5663173 complement(3396573..3397364) 1 NC_009901.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3397364 5663173 Spea_2780 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase YP_001502635.1 3396573 R 398579 CDS YP_001502636.1 157962602 5663174 complement(3397414..3398571) 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: sbm:Shew185_1491 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3398571 5663174 Spea_2781 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001502636.1 3397414 R 398579 CDS YP_001502637.1 157962603 5663175 complement(3398830..3400329) 1 NC_009901.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: spc:Sputcn32_1398 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 3400329 5663175 Spea_2782 Shewanella pealeana ATCC 700345 methylmalonate-semialdehyde dehydrogenase YP_001502637.1 3398830 R 398579 CDS YP_001502638.1 157962604 5663176 complement(3400507..3401697) 1 NC_009901.1 KEGG: sdn:Sden_1943 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; acetyl-CoA acetyltransferase 3401697 5663176 Spea_2783 Shewanella pealeana ATCC 700345 acetyl-CoA acetyltransferase YP_001502638.1 3400507 R 398579 CDS YP_001502639.1 157962605 5663177 complement(3402046..3402990) 1 NC_009901.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 3402990 5663177 Spea_2784 Shewanella pealeana ATCC 700345 homoserine O-succinyltransferase YP_001502639.1 3402046 R 398579 CDS YP_001502640.1 157962606 5663178 complement(3403067..3403468) 1 NC_009901.1 KEGG: slo:Shew_2552 hypothetical protein; hypothetical protein 3403468 5663178 Spea_2785 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502640.1 3403067 R 398579 CDS YP_001502641.1 157962607 5663179 3403713..3404486 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: shw:Sputw3181_2708 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3404486 5663179 Spea_2786 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001502641.1 3403713 D 398579 CDS YP_001502642.1 157962608 5663180 complement(3404570..3405217) 1 NC_009901.1 receptor for colicin S4; outer membrane protein W 3405217 5663180 Spea_2787 Shewanella pealeana ATCC 700345 outer membrane protein W YP_001502642.1 3404570 R 398579 CDS YP_001502643.1 157962609 5663181 complement(3405700..3406422) 1 NC_009901.1 hypothetical protein 3406422 5663181 Spea_2788 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502643.1 3405700 R 398579 CDS YP_001502644.1 157962610 5663182 complement(3406556..3407149) 1 NC_009901.1 PFAM: protein of unknown function DUF925; KEGG: she:Shewmr4_2602 protein of unknown function DUF925; hypothetical protein 3407149 5663182 Spea_2789 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502644.1 3406556 R 398579 CDS YP_001502645.1 157962611 5663183 complement(3407228..3407626) 1 NC_009901.1 KEGG: son:SO_1913 hypothetical protein; hypothetical protein 3407626 5663183 Spea_2790 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502645.1 3407228 R 398579 CDS YP_001502646.1 157962612 5663184 complement(3407670..3408536) 1 NC_009901.1 KEGG: slo:Shew_2556 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 3408536 5663184 Spea_2791 Shewanella pealeana ATCC 700345 acyl-CoA thioesterase II YP_001502646.1 3407670 R 398579 CDS YP_001502647.1 157962613 5663185 complement(3408603..3409538) 1 NC_009901.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: slo:Shew_2557 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3409538 5663185 Spea_2792 Shewanella pealeana ATCC 700345 short-chain dehydrogenase/reductase SDR YP_001502647.1 3408603 R 398579 CDS YP_001502648.1 157962614 5663186 3409881..3410765 1 NC_009901.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: slo:Shew_2558 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3410765 5663186 Spea_2793 Shewanella pealeana ATCC 700345 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001502648.1 3409881 D 398579 CDS YP_001502649.1 157962615 5663187 complement(3411130..3412665) 1 NC_009901.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 3412665 5663187 Spea_2794 Shewanella pealeana ATCC 700345 6-phosphogluconate dehydrogenase YP_001502649.1 3411130 R 398579 CDS YP_001502650.1 157962616 5663188 complement(3413054..3414958) 1 NC_009901.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sbm:Shew185_2844 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 3414958 5663188 Spea_2795 Shewanella pealeana ATCC 700345 AMP-dependent synthetase and ligase YP_001502650.1 3413054 R 398579 CDS YP_001502651.1 157962617 5663189 3415330..3415728 1 NC_009901.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: slo:Shew_2569 transcriptional regulator, MerR family; MerR family transcriptional regulator 3415728 5663189 Spea_2796 Shewanella pealeana ATCC 700345 MerR family transcriptional regulator YP_001502651.1 3415330 D 398579 CDS YP_001502652.1 157962618 5663190 3415858..3417027 1 NC_009901.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: slo:Shew_2570 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 3417027 5663190 Spea_2797 Shewanella pealeana ATCC 700345 acyl-CoA dehydrogenase domain-containing protein YP_001502652.1 3415858 D 398579 CDS YP_001502653.1 157962619 5663191 3417059..3418720 1 NC_009901.1 PFAM: carboxyl transferase; KEGG: sdn:Sden_2246 propionyl-CoA carboxylase; propionyl-CoA carboxylase 3418720 5663191 Spea_2798 Shewanella pealeana ATCC 700345 propionyl-CoA carboxylase YP_001502653.1 3417059 D 398579 CDS YP_001502654.1 157962620 5663192 3418779..3419657 1 NC_009901.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: slo:Shew_2572 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 3419657 5663192 Spea_2799 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase/isomerase YP_001502654.1 3418779 D 398579 CDS YP_001502655.1 157962621 5663193 3419659..3421749 1 NC_009901.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: slo:Shew_2573 carbamoyl-phosphate synthase L chain, ATP-binding; carbamoyl-phosphate synthase L chain ATP-binding 3421749 5663193 Spea_2800 Shewanella pealeana ATCC 700345 carbamoyl-phosphate synthase L chain ATP-binding YP_001502655.1 3419659 D 398579 CDS YP_001502656.1 157962622 5664796 3422068..3422973 1 NC_009901.1 PFAM: pyruvate carboxyltransferase; KEGG: slo:Shew_2574 pyruvate carboxyltransferase; pyruvate carboxyltransferase 3422973 5664796 Spea_2802 Shewanella pealeana ATCC 700345 pyruvate carboxyltransferase YP_001502656.1 3422068 D 398579 CDS YP_001502657.1 157962623 5663195 3423121..3423855 1 NC_009901.1 KEGG: slo:Shew_2575 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 3423855 5663195 Spea_2803 Shewanella pealeana ATCC 700345 3-oxoacid CoA-transferase subunit A YP_001502657.1 3423121 D 398579 CDS YP_001502658.1 157962624 5663196 3423868..3424524 1 NC_009901.1 KEGG: slo:Shew_2576 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 3424524 5663196 Spea_2804 Shewanella pealeana ATCC 700345 3-oxoacid CoA-transferase subunit B YP_001502658.1 3423868 D 398579 CDS YP_001502659.1 157962625 5663197 3424616..3425653 1 NC_009901.1 PFAM: aminoglycoside phosphotransferase; KEGG: sdn:Sden_2943 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 3425653 5663197 Spea_2805 Shewanella pealeana ATCC 700345 aminoglycoside phosphotransferase YP_001502659.1 3424616 D 398579 CDS YP_001502660.1 157962626 5663198 complement(3425714..3426127) 1 NC_009901.1 KEGG: shn:Shewana3_0471 hypothetical protein; hypothetical protein 3426127 5663198 Spea_2806 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502660.1 3425714 R 398579 CDS YP_001502661.1 157962627 5663199 complement(3426311..3429436) 1 NC_009901.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mmw:Mmwyl1_1016 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3429436 5663199 Spea_2807 Shewanella pealeana ATCC 700345 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001502661.1 3426311 R 398579 CDS YP_001502662.1 157962628 5663200 complement(3429470..3430606) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSp0313 probable multidrug efflux system protein; RND family efflux transporter MFP subunit 3430606 5663200 Spea_2808 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001502662.1 3429470 R 398579 CDS YP_001502663.1 157962629 5663201 3430860..3431537 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pfl:PFL_5111 DNA-binding response regulator ColR, putative; two component transcriptional regulator 3431537 5663201 Spea_2809 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001502663.1 3430860 D 398579 CDS YP_001502664.1 157962630 5663202 3431534..3432811 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sfr:Sfri_3675 periplasmic sensor signal transduction histidine kinase; histidine kinase 3432811 5663202 Spea_2810 Shewanella pealeana ATCC 700345 histidine kinase YP_001502664.1 3431534 D 398579 CDS YP_001502665.1 157962631 5663203 3432844..3433305 1 NC_009901.1 KEGG: vfi:VF1339 hypothetical protein; hypothetical protein 3433305 5663203 Spea_2811 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502665.1 3432844 D 398579 CDS YP_001502666.1 157962632 5663204 complement(3433543..3434943) 1 NC_009901.1 PFAM: cytochrome c552; KEGG: shn:Shewana3_0658 cytochrome c552; nitrite reductase 3434943 5663204 Spea_2812 Shewanella pealeana ATCC 700345 nitrite reductase YP_001502666.1 3433543 R 398579 CDS YP_001502667.1 157962633 5663205 3435135..3435572 1 NC_009901.1 KEGG: sdn:Sden_2534 hypothetical protein; hypothetical protein 3435572 5663205 Spea_2813 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502667.1 3435135 D 398579 CDS YP_001502668.1 157962634 5663206 complement(3435641..3435988) 1 NC_009901.1 PFAM: Endoribonuclease L-PSP; KEGG: vfi:VFA0365 translation initiation inhibitor; endoribonuclease L-PSP 3435988 5663206 Spea_2814 Shewanella pealeana ATCC 700345 endoribonuclease L-PSP YP_001502668.1 3435641 R 398579 CDS YP_001502669.1 157962635 5663207 3436164..3436676 1 NC_009901.1 KEGG: spc:Sputcn32_0630 hypothetical protein; hypothetical protein 3436676 5663207 Spea_2815 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502669.1 3436164 D 398579 CDS YP_001502670.1 157962636 5663208 complement(3436753..3437478) 1 NC_009901.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 3437478 5663208 Spea_2816 Shewanella pealeana ATCC 700345 cytoplasmic chaperone TorD family protein YP_001502670.1 3436753 R 398579 CDS YP_001502671.1 157962637 5663209 complement(3437557..3438222) 1 NC_009901.1 TIGRFAM: Dimethylsulfoxide reductase chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfr:Sfri_3683 4Fe-4S ferredoxin, iron-sulfur binding domain protein; dimethylsulfoxide reductase subunit B 3438222 5663209 Spea_2817 Shewanella pealeana ATCC 700345 dimethylsulfoxide reductase subunit B YP_001502671.1 3437557 R 398579 CDS YP_001502672.1 157962638 5663210 complement(3438237..3440759) 1 NC_009901.1 TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: spc:Sputcn32_0627 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; anaerobic dimethyl sulfoxide reductase subunit A 3440759 5663210 Spea_2818 Shewanella pealeana ATCC 700345 anaerobic dimethyl sulfoxide reductase subunit A YP_001502672.1 3438237 R 398579 CDS YP_001502673.1 157962639 5663211 complement(3440799..3442823) 1 NC_009901.1 KEGG: sfr:Sfri_3685 outer membrane protein; outer membrane protein 3442823 5663211 Spea_2819 Shewanella pealeana ATCC 700345 outer membrane protein YP_001502673.1 3440799 R 398579 CDS YP_001502674.1 157962640 5663212 complement(3442841..3443779) 1 NC_009901.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: sfr:Sfri_3686 cytochrome c family protein; cytochrome C family protein 3443779 5663212 Spea_2820 Shewanella pealeana ATCC 700345 cytochrome C family protein YP_001502674.1 3442841 R 398579 CDS YP_001502675.1 157962641 5663213 3444514..3444933 1 NC_009901.1 KEGG: cps:CPS_0255 isoprenylcysteine carboxyl methyltransferase family protein; isoprenylcysteine carboxyl methyltransferase family protein 3444933 5663213 Spea_2821 Shewanella pealeana ATCC 700345 isoprenylcysteine carboxyl methyltransferase family protein YP_001502675.1 3444514 D 398579 CDS YP_001502676.1 157962642 5663214 complement(3445085..3446542) 1 NC_009901.1 PFAM: protein of unknown function DUF1176; protein of unknown function DUF1311; KEGG: par:Psyc_1081 hypothetical protein; hypothetical protein 3446542 5663214 Spea_2822 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502676.1 3445085 R 398579 CDS YP_001502677.1 157962643 5663215 3446895..3447182 1 NC_009901.1 hypothetical protein 3447182 5663215 Spea_2823 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502677.1 3446895 D 398579 CDS YP_001502678.1 157962644 5663216 3447229..3447912 1 NC_009901.1 hypothetical protein 3447912 5663216 Spea_2824 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502678.1 3447229 D 398579 CDS YP_001502679.1 157962645 5663217 complement(3448032..3449135) 1 NC_009901.1 KEGG: rba:RB8157 hypothetical protein; MoxR-like protein ATPase-like protein 3449135 5663217 Spea_2825 Shewanella pealeana ATCC 700345 MoxR-like protein ATPase-like protein YP_001502679.1 3448032 R 398579 CDS YP_001502680.1 157962646 5663218 complement(3449144..3450406) 1 NC_009901.1 KEGG: dsy:DSY0956 hypothetical protein; hypothetical protein 3450406 5663218 Spea_2826 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502680.1 3449144 R 398579 CDS YP_001502681.1 157962647 5663219 3450504..3452894 1 NC_009901.1 PFAM: BRCT domain protein; leucine-rich repeat protein; KEGG: ana:alr0124 leucine-rich-repeat protein; hypothetical protein 3452894 5663219 Spea_2827 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502681.1 3450504 D 398579 CDS YP_001502682.1 157962648 5663220 3452857..3455424 1 NC_009901.1 KEGG: ana:alr0124 leucine-rich-repeat protein; hypothetical protein 3455424 5663220 Spea_2828 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502682.1 3452857 D 398579 CDS YP_001502683.1 157962649 5663221 3455550..3455864 1 NC_009901.1 KEGG: shm:Shewmr7_3723 hypothetical protein; hypothetical protein 3455864 5663221 Spea_2829 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502683.1 3455550 D 398579 CDS YP_001502684.1 157962650 5663222 3455910..3456776 1 NC_009901.1 hypothetical protein 3456776 5663222 Spea_2830 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502684.1 3455910 D 398579 CDS YP_001502685.1 157962651 5663223 3456806..3457774 1 NC_009901.1 KEGG: bam:Bamb_3528 hypothetical protein; hypothetical protein 3457774 5663223 Spea_2831 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502685.1 3456806 D 398579 CDS YP_001502686.1 157962652 5663224 3457764..3458705 1 NC_009901.1 KEGG: xcb:XC_1844 hypothetical protein; hypothetical protein 3458705 5663224 Spea_2832 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502686.1 3457764 D 398579 CDS YP_001502687.1 157962653 5663225 3459004..3459594 1 NC_009901.1 hypothetical protein 3459594 5663225 Spea_2833 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502687.1 3459004 D 398579 CDS YP_001502688.1 157962654 5663226 3459591..3459947 1 NC_009901.1 hypothetical protein 3459947 5663226 Spea_2834 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502688.1 3459591 D 398579 CDS YP_001502689.1 157962655 5663227 complement(3460066..3461265) 1 NC_009901.1 KEGG: mmz:MmarC7_1679 tetratricopeptide TPR_2 repeat protein; hypothetical protein 3461265 5663227 Spea_2835 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502689.1 3460066 R 398579 CDS YP_001502690.1 157962656 5663228 3461462..3462604 1 NC_009901.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 3462604 5663228 Spea_2836 Shewanella pealeana ATCC 700345 Sel1 domain-containing protein YP_001502690.1 3461462 D 398579 CDS YP_001502691.1 157962657 5663229 3462838..3463395 1 NC_009901.1 hypothetical protein 3463395 5663229 Spea_2837 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502691.1 3462838 D 398579 CDS YP_001502692.1 157962658 5663230 complement(3463622..3464182) 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_0135 protein of unknown function DUF1568; hypothetical protein 3464182 5663230 Spea_2838 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502692.1 3463622 R 398579 CDS YP_001502693.1 157962659 5663231 complement(3464186..3464599) 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_1610 protein of unknown function DUF1568; hypothetical protein 3464599 5663231 Spea_2839 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502693.1 3464186 R 398579 CDS YP_001502694.1 157962660 5664797 complement(3465073..3465975) 1 NC_009901.1 KEGG: rha:RHA1_ro02516 possible hydrolase; putative hydrolase 3465975 5664797 Spea_2841 Shewanella pealeana ATCC 700345 putative hydrolase YP_001502694.1 3465073 R 398579 CDS YP_001502695.1 157962661 5663233 complement(3466161..3467645) 1 NC_009901.1 KEGG: bur:Bcep18194_B3028 hypothetical protein; hypothetical protein 3467645 5663233 Spea_2842 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502695.1 3466161 R 398579 CDS YP_001502696.1 157962662 5663234 complement(3467818..3470160) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pfl:PFL_0213 TonB dependent receptor, putative; TonB-dependent receptor 3470160 5663234 Spea_2843 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001502696.1 3467818 R 398579 CDS YP_001502697.1 157962663 5663235 3470230..3471213 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_2148 transcriptional regulator, LysR family; LysR family transcriptional regulator 3471213 5663235 Spea_2844 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001502697.1 3470230 D 398579 CDS YP_001502698.1 157962664 5663236 complement(3471752..3472459) 1 NC_009901.1 hypothetical protein 3472459 5663236 Spea_2845 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502698.1 3471752 R 398579 CDS YP_001502699.1 157962665 5663237 complement(3472661..3473674) 1 NC_009901.1 hypothetical protein 3473674 5663237 Spea_2846 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502699.1 3472661 R 398579 CDS YP_001502700.1 157962666 5663238 3474643..3475680 1 NC_009901.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cps:CPS_0377 ISCps1, transposase; transposase IS116/IS110/IS902 family protein 3475680 5663238 Spea_2847 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001502700.1 3474643 D 398579 CDS YP_001502701.1 157962667 5663239 complement(3476204..3476770) 1 NC_009901.1 PFAM: LemA family protein; KEGG: ilo:IL1567 uncharacterized conserved membrane protein, LemA family; LemA family protein 3476770 5663239 Spea_2848 Shewanella pealeana ATCC 700345 LemA family protein YP_001502701.1 3476204 R 398579 CDS YP_001502702.1 157962668 5663240 complement(3476892..3478154) 1 NC_009901.1 KEGG: ilo:IL1568 predicted membrane protein; hypothetical protein 3478154 5663240 Spea_2849 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502702.1 3476892 R 398579 CDS YP_001502703.1 157962669 5663241 complement(3478141..3479472) 1 NC_009901.1 KEGG: ilo:IL1568 predicted membrane protein; hypothetical protein 3479472 5663241 Spea_2850 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502703.1 3478141 R 398579 CDS YP_001502704.1 157962670 5663242 complement(3480105..3480683) 1 NC_009901.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 3480683 5663242 Spea_2851 Shewanella pealeana ATCC 700345 thymidine kinase YP_001502704.1 3480105 R 398579 CDS YP_001502705.1 157962671 5663243 3481063..3483198 1 NC_009901.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: shn:Shewana3_1408 peptidase M3A and M3B, thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 3483198 5663243 Spea_2852 Shewanella pealeana ATCC 700345 peptidyl-dipeptidase Dcp YP_001502705.1 3481063 D 398579 CDS YP_001502706.1 157962672 5663244 complement(3483446..3485026) 1 NC_009901.1 PFAM: Na+/H+ antiporter NhaC; KEGG: slo:Shew_2582 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 3485026 5663244 Spea_2853 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001502706.1 3483446 R 398579 CDS YP_001502707.1 157962673 5663245 complement(3485522..3486445) 1 NC_009901.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: slo:Shew_2583 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 3486445 5663245 Spea_2854 Shewanella pealeana ATCC 700345 electron transfer flavoprotein subunit alpha YP_001502707.1 3485522 R 398579 CDS YP_001502708.1 157962674 5663246 complement(3486445..3487194) 1 NC_009901.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: slo:Shew_2584 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit alpha/beta 3487194 5663246 Spea_2855 Shewanella pealeana ATCC 700345 electron transfer flavoprotein subunit alpha/beta YP_001502708.1 3486445 R 398579 CDS YP_001502709.1 157962675 5663247 3487541..3487933 1 NC_009901.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: she:Shewmr4_1351 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 3487933 5663247 Spea_2856 Shewanella pealeana ATCC 700345 histone family protein nucleoid-structuring protein H-NS YP_001502709.1 3487541 D 398579 CDS YP_001502710.1 157962676 5663248 3488091..3491123 1 NC_009901.1 PFAM: amidohydrolase; KEGG: slo:Shew_2586 amidohydrolase; amidohydrolase 3491123 5663248 Spea_2857 Shewanella pealeana ATCC 700345 amidohydrolase YP_001502710.1 3488091 D 398579 CDS YP_001502711.1 157962677 5663249 3491123..3492526 1 NC_009901.1 KEGG: slo:Shew_2587 hypothetical protein; hypothetical protein 3492526 5663249 Spea_2858 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502711.1 3491123 D 398579 CDS YP_001502712.1 157962678 5663250 3492653..3493036 1 NC_009901.1 KEGG: shw:Sputw3181_1493 lipoprotein, putative; putative lipoprotein 3493036 5663250 Spea_2859 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001502712.1 3492653 D 398579 CDS YP_001502713.1 157962679 5663251 3493064..3493834 1 NC_009901.1 PFAM: protein of unknown function UPF0066; KEGG: sfr:Sfri_2751 protein of unknown function UPF0066; hypothetical protein 3493834 5663251 Spea_2860 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502713.1 3493064 D 398579 CDS YP_001502714.1 157962680 5663252 3493843..3494472 1 NC_009901.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: son:SO_3152 acetyltransferase, CysE/LacA/LpxA/NodL family; hexapaptide repeat-containing transferase 3494472 5663252 Spea_2861 Shewanella pealeana ATCC 700345 hexapaptide repeat-containing transferase YP_001502714.1 3493843 D 398579 CDS YP_001502715.1 157962681 5663253 3494769..3495212 1 NC_009901.1 PFAM: UspA domain protein; KEGG: slo:Shew_3100 UspA domain protein; UspA domain-containing protein 3495212 5663253 Spea_2862 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001502715.1 3494769 D 398579 CDS YP_001502716.1 157962682 5663254 complement(3495733..3496677) 1 NC_009901.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pol:Bpro_3376 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase 3496677 5663254 Spea_2863 Shewanella pealeana ATCC 700345 nitrilase YP_001502716.1 3495733 R 398579 CDS YP_001502717.1 157962683 5663255 3497086..3498798 1 NC_009901.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3498798 5663255 Spea_2864 Shewanella pealeana ATCC 700345 prolyl-tRNA synthetase YP_001502717.1 3497086 D 398579 CDS YP_001502718.1 157962684 5663256 3499017..3500141 1 NC_009901.1 PFAM: Patatin; KEGG: saz:Sama_1160 hypothetical protein; patatin 3500141 5663256 Spea_2865 Shewanella pealeana ATCC 700345 patatin YP_001502718.1 3499017 D 398579 CDS YP_001502719.1 157962685 5663257 complement(3500134..3500862) 1 NC_009901.1 KEGG: ppr:PBPRB1925 hypothetical protein; hypothetical protein 3500862 5663257 Spea_2866 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502719.1 3500134 R 398579 CDS YP_001502720.1 157962686 5663258 complement(3500940..3502889) 1 NC_009901.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: slo:Shew_2617 potassium efflux system protein; sodium/hydrogen exchanger 3502889 5663258 Spea_2867 Shewanella pealeana ATCC 700345 sodium/hydrogen exchanger YP_001502720.1 3500940 R 398579 CDS YP_001502721.1 157962687 5663259 3503187..3504068 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_1467 diguanylate cyclase; diguanylate cyclase 3504068 5663259 Spea_2868 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502721.1 3503187 D 398579 CDS YP_001502722.1 157962688 5663260 complement(3504115..3505524) 1 NC_009901.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; KEGG: she:Shewmr4_2625 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 3505524 5663260 Spea_2869 Shewanella pealeana ATCC 700345 tRNA(Ile)-lysidine synthetase YP_001502722.1 3504115 R 398579 CDS YP_001502723.1 157962689 5663261 complement(3505566..3509099) 1 NC_009901.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 3509099 dnaE 5663261 dnaE Shewanella pealeana ATCC 700345 DNA polymerase III subunit alpha YP_001502723.1 3505566 R 398579 CDS YP_001502724.1 157962690 5663262 complement(3509209..3509820) 1 NC_009901.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3509820 rnhB 5663262 rnhB Shewanella pealeana ATCC 700345 ribonuclease HII YP_001502724.1 3509209 R 398579 CDS YP_001502725.1 157962691 5663263 complement(3509820..3510971) 1 NC_009901.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 3510971 lpxB 5663263 lpxB Shewanella pealeana ATCC 700345 lipid-A-disaccharide synthase YP_001502725.1 3509820 R 398579 CDS YP_001502726.1 157962692 5663264 complement(3511039..3511809) 1 NC_009901.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 3511809 5663264 Spea_2873 Shewanella pealeana ATCC 700345 UDP-N-acetylglucosamine acyltransferase YP_001502726.1 3511039 R 398579 CDS YP_001502727.1 157962693 5663265 complement(3511806..3512303) 1 NC_009901.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 3512303 fabZ 5663265 fabZ Shewanella pealeana ATCC 700345 (3R)-hydroxymyristoyl-ACP dehydratase YP_001502727.1 3511806 R 398579 CDS YP_001502728.1 157962694 5663266 complement(3512304..3513320) 1 NC_009901.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3513320 lpxD 5663266 lpxD Shewanella pealeana ATCC 700345 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001502728.1 3512304 R 398579 CDS YP_001502729.1 157962695 5663267 complement(3513325..3513822) 1 NC_009901.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: slo:Shew_2626 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 3513822 5663267 Spea_2876 Shewanella pealeana ATCC 700345 outer membrane chaperone Skp YP_001502729.1 3513325 R 398579 CDS YP_001502730.1 157962696 5663268 complement(3513881..3516364) 1 NC_009901.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: slo:Shew_2627 surface antigen (D15); surface antigen (D15) 3516364 5663268 Spea_2877 Shewanella pealeana ATCC 700345 surface antigen (D15) YP_001502730.1 3513881 R 398579 CDS YP_001502731.1 157962697 5663269 complement(3516396..3517766) 1 NC_009901.1 KEGG: shm:Shewmr7_2701 putative membrane-associated zinc metalloprotease; TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; putative membrane-associated zinc metalloprotease 3517766 5663269 Spea_2878 Shewanella pealeana ATCC 700345 putative membrane-associated zinc metalloprotease YP_001502731.1 3516396 R 398579 CDS YP_001502732.1 157962698 5663270 complement(3517781..3518971) 1 NC_009901.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3518971 5663270 Spea_2879 Shewanella pealeana ATCC 700345 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001502732.1 3517781 R 398579 CDS YP_001502733.1 157962699 5663271 complement(3518976..3519833) 1 NC_009901.1 PFAM: phosphatidate cytidylyltransferase; KEGG: saz:Sama_1144 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 3519833 5663271 Spea_2880 Shewanella pealeana ATCC 700345 phosphatidate cytidylyltransferase YP_001502733.1 3518976 R 398579 CDS YP_001502734.1 157962700 5663272 complement(3519854..3520654) 1 NC_009901.1 KEGG: sbm:Shew185_1449 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 3520654 5663272 Spea_2881 Shewanella pealeana ATCC 700345 undecaprenyl diphosphate synthase YP_001502734.1 3519854 R 398579 CDS YP_001502735.1 157962701 5663273 complement(3520906..3521463) 1 NC_009901.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 3521463 frr 5663273 frr Shewanella pealeana ATCC 700345 ribosome recycling factor YP_001502735.1 3520906 R 398579 CDS YP_001502736.1 157962702 5663274 complement(3521496..3522224) 1 NC_009901.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 3522224 pyrH 5663274 pyrH Shewanella pealeana ATCC 700345 uridylate kinase YP_001502736.1 3521496 R 398579 CDS YP_001502737.1 157962703 5663275 complement(3522367..3523278) 1 NC_009901.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 3523278 tsf 5663275 tsf Shewanella pealeana ATCC 700345 elongation factor Ts YP_001502737.1 3522367 R 398579 CDS YP_001502738.1 157962704 5663276 complement(3523353..3524081) 1 NC_009901.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 3524081 rpsB 5663276 rpsB Shewanella pealeana ATCC 700345 30S ribosomal protein S2 YP_001502738.1 3523353 R 398579 CDS YP_001502739.1 157962705 5663277 3524389..3525189 1 NC_009901.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 3525189 5663277 Spea_2886 Shewanella pealeana ATCC 700345 methionine aminopeptidase YP_001502739.1 3524389 D 398579 CDS YP_001502740.1 157962706 5663278 3525421..3527976 1 NC_009901.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 3527976 5663278 Spea_2887 Shewanella pealeana ATCC 700345 PII uridylyl-transferase YP_001502740.1 3525421 D 398579 CDS YP_001502741.1 157962707 5663279 3528009..3528833 1 NC_009901.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3528833 dapD 5663279 dapD Shewanella pealeana ATCC 700345 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001502741.1 3528009 D 398579 CDS YP_001502742.1 157962708 5663280 3529044..3529388 1 NC_009901.1 KEGG: slo:Shew_2639 hypothetical protein; hypothetical protein 3529388 5663280 Spea_2889 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502742.1 3529044 D 398579 CDS YP_001502743.1 157962709 5663281 complement(3529514..3529978) 1 NC_009901.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 3529978 5663281 Spea_2890 Shewanella pealeana ATCC 700345 flavodoxin YP_001502743.1 3529514 R 398579 CDS YP_001502744.1 157962710 5663282 complement(3530330..3531184) 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: slo:Shew_2643 pseudouridylate synthase; pseudouridine synthase 3531184 5663282 Spea_2891 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001502744.1 3530330 R 398579 CDS YP_001502745.1 157962711 5663283 complement(3531208..3531528) 1 NC_009901.1 PFAM: protein of unknown function DUF446; KEGG: shm:Shewmr7_2718 protein of unknown function DUF446; hypothetical protein 3531528 5663283 Spea_2892 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502745.1 3531208 R 398579 CDS YP_001502746.1 157962712 5663284 3531650..3532663 1 NC_009901.1 KEGG: shw:Sputw3181_2766 hypothetical protein; hypothetical protein 3532663 5663284 Spea_2893 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502746.1 3531650 D 398579 CDS YP_001502747.1 157962713 5663285 3532660..3533055 1 NC_009901.1 KEGG: slo:Shew_2646 hypothetical protein; hypothetical protein 3533055 5663285 Spea_2894 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502747.1 3532660 D 398579 CDS YP_001502748.1 157962714 5663286 complement(3534213..3534515) 1 NC_009901.1 KEGG: shn:Shewana3_2828 hypothetical protein; hypothetical protein 3534515 5663286 Spea_2895 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502748.1 3534213 R 398579 CDS YP_001502749.1 157962715 5663287 complement(3534508..3535146) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbl:Sbal_1437 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3535146 5663287 Spea_2896 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001502749.1 3534508 R 398579 CDS YP_001502750.1 157962716 5663288 3535332..3535562 1 NC_009901.1 KEGG: slo:Shew_2649 hypothetical protein; hypothetical protein 3535562 5663288 Spea_2897 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502750.1 3535332 D 398579 CDS YP_001502751.1 157962717 5663289 complement(3535569..3535940) 1 NC_009901.1 KEGG: sbl:Sbal_1435 hypothetical protein; hypothetical protein 3535940 5663289 Spea_2898 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502751.1 3535569 R 398579 CDS YP_001502752.1 157962718 5663290 3536100..3536447 1 NC_009901.1 KEGG: sfr:Sfri_1252 hypothetical protein; hypothetical protein 3536447 5663290 Spea_2899 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502752.1 3536100 D 398579 CDS YP_001502753.1 157962719 5663291 3536455..3537228 1 NC_009901.1 KEGG: slo:Shew_2652 hypothetical protein; hypothetical protein 3537228 5663291 Spea_2900 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502753.1 3536455 D 398579 CDS YP_001502754.1 157962720 5663292 complement(3537353..3537994) 1 NC_009901.1 putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 3537994 5663292 Spea_2901 Shewanella pealeana ATCC 700345 SecY interacting protein Syd YP_001502754.1 3537353 R 398579 CDS YP_001502755.1 157962721 5663293 3538038..3538910 1 NC_009901.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 3538910 queF 5663293 queF Shewanella pealeana ATCC 700345 7-cyano-7-deazaguanine reductase YP_001502755.1 3538038 D 398579 CDS YP_001502756.1 157962722 5663294 complement(3538979..3539896) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_1430 transcriptional regulator, LysR family; LysR family transcriptional regulator 3539896 5663294 Spea_2903 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001502756.1 3538979 R 398579 CDS YP_001502757.1 157962723 5663295 3540098..3542083 1 NC_009901.1 PFAM: beta-lactamase domain protein; KEGG: sbl:Sbal_1429 beta-lactamase domain protein; beta-lactamase domain-containing protein 3542083 5663295 Spea_2904 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001502757.1 3540098 D 398579 CDS YP_001502758.1 157962724 5663296 complement(3542200..3543111) 1 NC_009901.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sbm:Shew185_1421 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 3543111 5663296 Spea_2905 Shewanella pealeana ATCC 700345 4'-phosphopantetheinyl transferase YP_001502758.1 3542200 R 398579 CDS YP_001502759.1 157962725 5663297 3543574..3544440 1 NC_009901.1 KEGG: slo:Shew_2664 transcriptional regulator, putative; transcriptional regulator 3544440 5663297 Spea_2906 Shewanella pealeana ATCC 700345 transcriptional regulator YP_001502759.1 3543574 D 398579 CDS YP_001502760.1 157962726 5663298 3544440..3552491 1 NC_009901.1 KEGG: slo:Shew_2665 beta-ketoacyl synthase; TIGRFAM: Polyketide-type polyunsaturated fatty acid synthase, PfaA; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; polyketide-type polyunsaturated fatty acid synthase PfaA 3552491 5663298 Spea_2907 Shewanella pealeana ATCC 700345 polyketide-type polyunsaturated fatty acid synthase PfaA YP_001502760.1 3544440 D 398579 CDS YP_001502761.1 157962727 5663299 3552491..3554824 1 NC_009901.1 TIGRFAM: PfaB family protein; KEGG: ppr:PBPRA1459 omega-3 polyunsaturated fatty acid synthase PfaB; PfaB family protein 3554824 5663299 Spea_2908 Shewanella pealeana ATCC 700345 PfaB family protein YP_001502761.1 3552491 D 398579 CDS YP_001502762.1 157962728 5663300 3554824..3560664 1 NC_009901.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: slo:Shew_2667 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 3560664 5663300 Spea_2909 Shewanella pealeana ATCC 700345 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001502762.1 3554824 D 398579 CDS YP_001502763.1 157962729 5663301 3560820..3562448 1 NC_009901.1 TIGRFAM: PfaD family protein; KEGG: slo:Shew_2668 2-nitropropane dioxygenase, NPD; PfaD family protein 3562448 5663301 Spea_2910 Shewanella pealeana ATCC 700345 PfaD family protein YP_001502763.1 3560820 D 398579 CDS YP_001502764.1 157962730 5664798 3563264..3564886 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; CHASE4 domain protein; KEGG: sdn:Sden_1662 GGDEF domain; diguanylate cyclase 3564886 5664798 Spea_2912 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502764.1 3563264 D 398579 CDS YP_001502765.1 157962731 5663303 3565008..3565556 1 NC_009901.1 KEGG: shw:Sputw3181_3641 hypothetical protein; hypothetical protein 3565556 5663303 Spea_2913 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502765.1 3565008 D 398579 CDS YP_001502766.1 157962732 5663304 complement(3565620..3567932) 1 NC_009901.1 PFAM: peptidase S45 penicillin amidase; KEGG: slo:Shew_2669 penicillin amidase; penicillin amidase 3567932 5663304 Spea_2914 Shewanella pealeana ATCC 700345 penicillin amidase YP_001502766.1 3565620 R 398579 CDS YP_001502767.1 157962733 5663305 3568168..3568419 1 NC_009901.1 KEGG: sfr:Sfri_3228 hypothetical protein; hypothetical protein 3568419 5663305 Spea_2915 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502767.1 3568168 D 398579 CDS YP_001502768.1 157962734 5663306 3568994..3569236 1 NC_009901.1 KEGG: ppr:PBPRB0752 hypothetical protein; hypothetical protein 3569236 5663306 Spea_2916 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502768.1 3568994 D 398579 CDS YP_001502769.1 157962735 5663307 3569294..3570613 1 NC_009901.1 KEGG: abo:ABO_2640 dGTPase; TIGRFAM: putative deoxyguanosinetriphosphate triphosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; putative deoxyguanosinetriphosphate triphosphohydrolase 3570613 5663307 Spea_2917 Shewanella pealeana ATCC 700345 putative deoxyguanosinetriphosphate triphosphohydrolase YP_001502769.1 3569294 D 398579 CDS YP_001502770.1 157962736 5663308 3570870..3571049 1 NC_009901.1 KEGG: sfr:Sfri_0896 hypothetical protein; hypothetical protein 3571049 5663308 Spea_2918 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502770.1 3570870 D 398579 CDS YP_001502771.1 157962737 5663309 complement(3571046..3571387) 1 NC_009901.1 KEGG: sdn:Sden_2168 integrase, catalytic region; integrase, catalytic region 3571387 5663309 Spea_2919 Shewanella pealeana ATCC 700345 integrase, catalytic region YP_001502771.1 3571046 R 398579 CDS YP_001502772.1 157962738 5663310 3571949..3572926 1 NC_009901.1 KEGG: ilo:IL1590 hypothetical protein; hypothetical protein 3572926 5663310 Spea_2920 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502772.1 3571949 D 398579 CDS YP_001502773.1 157962739 5663311 3573607..3574956 1 NC_009901.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mxa:MXAN_4597 putative methyltransferase; radical SAM domain-containing protein 3574956 5663311 Spea_2921 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001502773.1 3573607 D 398579 CDS YP_001502774.1 157962740 5663312 complement(3575755..3576732) 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_0135 protein of unknown function DUF1568; hypothetical protein 3576732 5663312 Spea_2922 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502774.1 3575755 R 398579 CDS YP_001502775.1 157962741 5663313 3577269..3577559 1 NC_009901.1 hypothetical protein 3577559 5663313 Spea_2923 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502775.1 3577269 D 398579 CDS YP_001502776.1 157962742 5663314 3577668..3578171 1 NC_009901.1 KEGG: cps:CPS_0689 hypothetical protein; hypothetical protein 3578171 5663314 Spea_2924 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502776.1 3577668 D 398579 CDS YP_001502777.1 157962743 5663315 3578230..3578667 1 NC_009901.1 KEGG: hch:HCH_03398 hypothetical protein; hypothetical protein 3578667 5663315 Spea_2925 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502777.1 3578230 D 398579 CDS YP_001502778.1 157962744 5663316 3579604..3581010 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: vfi:VF1790 ATP-dependent RNA helicase; DEAD/DEAH box helicase 3581010 5663316 Spea_2926 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001502778.1 3579604 D 398579 CDS YP_001502779.1 157962745 5663317 3581259..3582476 1 NC_009901.1 KEGG: sfr:Sfri_0530 hypothetical protein; hypothetical protein 3582476 5663317 Spea_2927 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502779.1 3581259 D 398579 CDS YP_001502780.1 157962746 5663318 complement(3582553..3583878) 1 NC_009901.1 KEGG: sfr:Sfri_3605 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 3583878 5663318 Spea_2928 Shewanella pealeana ATCC 700345 amidohydrolase YP_001502780.1 3582553 R 398579 CDS YP_001502781.1 157962747 5663319 3584266..3586533 1 NC_009901.1 TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: son:SO_0719 TonB-dependent receptor, putative; TonB-dependent heme/hemoglobin receptor family protein 3586533 5663319 Spea_2929 Shewanella pealeana ATCC 700345 TonB-dependent heme/hemoglobin receptor family protein YP_001502781.1 3584266 D 398579 CDS YP_001502782.1 157962748 5663320 complement(3586618..3589050) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shn:Shewana3_2944 TonB-dependent receptor; TonB-dependent receptor plug 3589050 5663320 Spea_2930 Shewanella pealeana ATCC 700345 TonB-dependent receptor plug YP_001502782.1 3586618 R 398579 CDS YP_001502783.1 157962749 5663321 complement(3589524..3590465) 1 NC_009901.1 KEGG: slo:Shew_2693 hypothetical protein; hypothetical protein 3590465 5663321 Spea_2931 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502783.1 3589524 R 398579 CDS YP_001502784.1 157962750 5663322 complement(3591482..3592519) 1 NC_009901.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cps:CPS_0377 ISCps1, transposase; transposase IS116/IS110/IS902 family protein 3592519 5663322 Spea_2932 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001502784.1 3591482 R 398579 CDS YP_001502785.1 157962751 5663323 3593759..3594796 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: shm:Shewmr7_1178 protein of unknown function DUF1568; hypothetical protein 3594796 5663323 Spea_2933 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502785.1 3593759 D 398579 CDS YP_001502786.1 157962752 5663324 3595090..3595416 1 NC_009901.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: sfr:Sfri_1133 propeptide, PepSY amd peptidase M4; peptidase 3595416 5663324 Spea_2934 Shewanella pealeana ATCC 700345 peptidase YP_001502786.1 3595090 D 398579 CDS YP_001502787.1 157962753 5663325 3595533..3596222 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO_4647 DNA-binding response regulator; two component transcriptional regulator 3596222 5663325 Spea_2935 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001502787.1 3595533 D 398579 CDS YP_001502788.1 157962754 5663326 3596206..3597759 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: pin:Ping_0281 sensor histidine kinase with ATPase domain; histidine kinase 3597759 5663326 Spea_2936 Shewanella pealeana ATCC 700345 histidine kinase YP_001502788.1 3596206 D 398579 CDS YP_001502789.1 157962755 5663327 3597869..3599269 1 NC_009901.1 KEGG: sbm:Shew185_4214 hypothetical protein; hypothetical protein 3599269 5663327 Spea_2937 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502789.1 3597869 D 398579 CDS YP_001502790.1 157962756 5663328 complement(3599380..3600759) 1 NC_009901.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: shm:Shewmr7_0539 serine/threonine protein kinase; serine/threonine protein kinase 3600759 5663328 Spea_2938 Shewanella pealeana ATCC 700345 serine/threonine protein kinase YP_001502790.1 3599380 R 398579 CDS YP_001502791.1 157962757 5663329 complement(3600847..3601587) 1 NC_009901.1 PFAM: protein of unknown function DUF599; KEGG: sbm:Shew185_0877 protein of unknown function DUF599; hypothetical protein 3601587 5663329 Spea_2939 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502791.1 3600847 R 398579 CDS YP_001502792.1 157962758 5663330 complement(3601682..3601843) 1 NC_009901.1 KEGG: slo:Shew_2719 hypothetical protein; hypothetical protein 3601843 5663330 Spea_2940 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502792.1 3601682 R 398579 CDS YP_001502793.1 157962759 5663331 3602067..3602294 1 NC_009901.1 KEGG: shm:Shewmr7_2754 hypothetical protein; hypothetical protein 3602294 5663331 Spea_2941 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502793.1 3602067 D 398579 CDS YP_001502794.1 157962760 5663332 complement(3602391..3603161) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0630 conserved hypothetical protein 245; hypothetical protein 3603161 5663332 Spea_2942 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502794.1 3602391 R 398579 CDS YP_001502795.1 157962761 5663333 3603368..3604591 1 NC_009901.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3604591 5663333 Spea_2943 Shewanella pealeana ATCC 700345 peptidase T YP_001502795.1 3603368 D 398579 CDS YP_001502796.1 157962762 5663334 3604973..3605695 1 NC_009901.1 KEGG: sfr:Sfri_3204 nucleoside-diphosphate-sugar epimerase; nucleoside-diphosphate-sugar epimerase 3605695 5663334 Spea_2944 Shewanella pealeana ATCC 700345 nucleoside-diphosphate-sugar epimerase YP_001502796.1 3604973 D 398579 CDS YP_001502797.1 157962763 5663335 3605789..3606526 1 NC_009901.1 PFAM: protein of unknown function DUF633; KEGG: sbm:Shew185_2328 hypothetical protein; hypothetical protein 3606526 5663335 Spea_2945 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502797.1 3605789 D 398579 CDS YP_001502798.1 157962764 5663336 3606579..3607121 1 NC_009901.1 PFAM: NUDIX hydrolase; KEGG: slo:Shew_2723 NUDIX hydrolase; NUDIX hydrolase 3607121 5663336 Spea_2946 Shewanella pealeana ATCC 700345 NUDIX hydrolase YP_001502798.1 3606579 D 398579 CDS YP_001502799.1 157962765 5663337 complement(3607245..3607619) 1 NC_009901.1 KEGG: sde:Sde_0094 hypothetical protein; hypothetical protein 3607619 5663337 Spea_2947 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502799.1 3607245 R 398579 CDS YP_001502800.1 157962766 5663338 complement(3607988..3609217) 1 NC_009901.1 PFAM: sodium/glutamate symporter; KEGG: psa:PST_0687 sodium-glutamate symporter; sodium/glutamate symporter 3609217 5663338 Spea_2948 Shewanella pealeana ATCC 700345 sodium/glutamate symporter YP_001502800.1 3607988 R 398579 CDS YP_001502801.1 157962767 5663339 3609712..3610980 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: shw:Sputw3181_3503 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 3610980 5663339 Spea_2949 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001502801.1 3609712 D 398579 CDS YP_001502802.1 157962768 5663340 complement(3611087..3612001) 1 NC_009901.1 PFAM: Indigoidine synthase A family protein; KEGG: slo:Shew_2724 indigoidine synthase A family protein; indigoidine synthase A family protein 3612001 5663340 Spea_2950 Shewanella pealeana ATCC 700345 indigoidine synthase A family protein YP_001502802.1 3611087 R 398579 CDS YP_001502803.1 157962769 5663341 complement(3611995..3613086) 1 NC_009901.1 PFAM: PfkB domain protein; Helix-turn-helix type 11 domain protein; KEGG: slo:Shew_2725 PfkB domain protein; ribokinase-like domain-containing protein 3613086 5663341 Spea_2951 Shewanella pealeana ATCC 700345 ribokinase-like domain-containing protein YP_001502803.1 3611995 R 398579 CDS YP_001502804.1 157962770 5663342 complement(3613640..3615379) 1 NC_009901.1 TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; KEGG: vfi:VF1065 integral membrane protein with TrkA domains; YidE/YbjL protein 3615379 5663342 Spea_2952 Shewanella pealeana ATCC 700345 YidE/YbjL protein YP_001502804.1 3613640 R 398579 CDS YP_001502805.1 157962771 5663343 complement(3615440..3616834) 1 NC_009901.1 TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase; KEGG: vfi:VF1064 glutamate decarboxylase; glutamate decarboxylase 3616834 5663343 Spea_2953 Shewanella pealeana ATCC 700345 glutamate decarboxylase YP_001502805.1 3615440 R 398579 CDS YP_001502806.1 157962772 5663344 3617318..3617656 1 NC_009901.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sdn:Sden_2795 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 3617656 5663344 Spea_2954 Shewanella pealeana ATCC 700345 antibiotic biosynthesis monooxygenase YP_001502806.1 3617318 D 398579 CDS YP_001502807.1 157962773 5663345 complement(3617737..3617943) 1 NC_009901.1 KEGG: cps:CPS_3943 hypothetical protein; hypothetical protein 3617943 5663345 Spea_2955 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502807.1 3617737 R 398579 CDS YP_001502808.1 157962774 5663346 complement(3618060..3618911) 1 NC_009901.1 KEGG: pat:Patl_1499 hypothetical protein; hypothetical protein 3618911 5663346 Spea_2956 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502808.1 3618060 R 398579 CDS YP_001502809.1 157962775 5663347 3619205..3621316 1 NC_009901.1 SMART: Dystroglycan-type cadherin domain protein; KEGG: vha:VIBHAR_00499 hypothetical protein; dystroglycan-type cadherin domain-containing protein 3621316 5663347 Spea_2957 Shewanella pealeana ATCC 700345 dystroglycan-type cadherin domain-containing protein YP_001502809.1 3619205 D 398579 CDS YP_001502810.1 157962776 5663348 complement(3621439..3621894) 1 NC_009901.1 PFAM: protein of unknown function DUF188; KEGG: slo:Shew_2726 protein of unknown function DUF188; hypothetical protein 3621894 5663348 Spea_2958 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502810.1 3621439 R 398579 CDS YP_001502811.1 157962777 5663349 3622066..3622743 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: sbl:Sbal_1396 hypothetical protein; hypothetical protein 3622743 5663349 Spea_2959 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502811.1 3622066 D 398579 CDS YP_001502812.1 157962778 5663350 3622860..3624209 1 NC_009901.1 PFAM: Fmu (Sun) domain protein; KEGG: sfr:Sfri_1209 Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 3624209 5663350 Spea_2960 Shewanella pealeana ATCC 700345 Fmu (Sun) domain-containing protein YP_001502812.1 3622860 D 398579 CDS YP_001502813.1 157962779 5663351 complement(3624404..3626101) 1 NC_009901.1 PFAM: GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: shm:Shewmr7_2768 diguanylate cyclase; diguanylate cyclase 3626101 5663351 Spea_2961 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502813.1 3624404 R 398579 CDS YP_001502814.1 157962780 5663352 complement(3626414..3626953) 1 NC_009901.1 PFAM: YfaZ family protein; KEGG: slo:Shew_2740 YfaZ family protein; hypothetical protein 3626953 5663352 Spea_2962 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502814.1 3626414 R 398579 CDS YP_001502815.1 157962781 5663353 3627371..3628447 1 NC_009901.1 KEGG: slo:Shew_3409 putative lipoprotein; putative lipoprotein 3628447 5663353 Spea_2963 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001502815.1 3627371 D 398579 CDS YP_001502816.1 157962782 5663354 3628609..3629091 1 NC_009901.1 PFAM: glutathione peroxidase; KEGG: sfr:Sfri_2764 glutathione peroxidase; glutathione peroxidase 3629091 5663354 Spea_2964 Shewanella pealeana ATCC 700345 glutathione peroxidase YP_001502816.1 3628609 D 398579 CDS YP_001502817.1 157962783 5663355 complement(3630814..3632607) 1 NC_009901.1 PFAM: peptidase M61 domain protein; Peptidase M1 membrane alanine aminopeptidase ; Leukotriene A4 hydrolase; KEGG: slo:Shew_2742 peptidase M1, membrane alanine aminopeptidase; peptidase M1 membrane alanine aminopeptidase 3632607 5663355 Spea_2965 Shewanella pealeana ATCC 700345 peptidase M1 membrane alanine aminopeptidase YP_001502817.1 3630814 R 398579 CDS YP_001502818.1 157962784 5663356 3632720..3633634 1 NC_009901.1 PFAM: Peptidase M9A collagenase domain protein; KEGG: slo:Shew_2743 microbial collagenase; collagenase 3633634 5663356 Spea_2966 Shewanella pealeana ATCC 700345 collagenase YP_001502818.1 3632720 D 398579 CDS YP_001502819.1 157962785 5663357 complement(3633722..3634693) 1 NC_009901.1 TIGRFAM: phosphate binding protein; KEGG: slo:Shew_2747 phosphate binding protein; phosphate-binding protein 3634693 5663357 Spea_2967 Shewanella pealeana ATCC 700345 phosphate-binding protein YP_001502819.1 3633722 R 398579 CDS YP_001502820.1 157962786 5663358 complement(3634896..3636215) 1 NC_009901.1 KEGG: son:SO_1559 phosphate regulon sensor protein PhoR; TIGRFAM: Phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase 3636215 5663358 Spea_2968 Shewanella pealeana ATCC 700345 PAS/PAC sensor signal transduction histidine kinase YP_001502820.1 3634896 R 398579 CDS YP_001502821.1 157962787 5663359 complement(3636287..3636976) 1 NC_009901.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_2749 two component transcriptional regulator, winged helix family; two component transcriptional regulator 3636976 5663359 Spea_2969 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001502821.1 3636287 R 398579 CDS YP_001502822.1 157962788 5663360 complement(3637436..3638386) 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_2750 porin, gram-negative type; porin 3638386 5663360 Spea_2970 Shewanella pealeana ATCC 700345 porin YP_001502822.1 3637436 R 398579 CDS YP_001502823.1 157962789 5663361 3638676..3639587 1 NC_009901.1 Required for efficient pilin antigenic variation; recombination associated protein 3639587 rdgC 5663361 rdgC Shewanella pealeana ATCC 700345 recombination associated protein YP_001502823.1 3638676 D 398579 CDS YP_001502824.1 157962790 5663362 complement(3639647..3641452) 1 NC_009901.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: shn:Shewana3_2882 peptidase M61 domain protein; peptidase M61 domain-containing protein 3641452 5663362 Spea_2972 Shewanella pealeana ATCC 700345 peptidase M61 domain-containing protein YP_001502824.1 3639647 R 398579 CDS YP_001502825.1 157962791 5663363 3641580..3643751 1 NC_009901.1 SMART: Tetratricopeptide domain protein; KEGG: son:SO_1552 TPR domain protein; tetratricopeptide domain-containing protein 3643751 5663363 Spea_2973 Shewanella pealeana ATCC 700345 tetratricopeptide domain-containing protein YP_001502825.1 3641580 D 398579 CDS YP_001502826.1 157962792 5663364 3643872..3645428 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shm:Shewmr7_2782 diguanylate cyclase; diguanylate cyclase 3645428 5663364 Spea_2974 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001502826.1 3643872 D 398579 CDS YP_001502827.1 157962793 5663365 3645507..3646859 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: sdn:Sden_2557 conserved hypothetical protein 730; hypothetical protein 3646859 5663365 Spea_2975 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502827.1 3645507 D 398579 CDS YP_001502828.1 157962794 5663366 3647092..3647862 1 NC_009901.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 3647862 xni 5663366 xni Shewanella pealeana ATCC 700345 exonuclease IX YP_001502828.1 3647092 D 398579 CDS YP_001502829.1 157962795 5663367 3647968..3648354 1 NC_009901.1 KEGG: slo:Shew_2757 hypothetical protein; hypothetical protein 3648354 5663367 Spea_2977 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502829.1 3647968 D 398579 CDS YP_001502830.1 157962796 5663368 complement(3648853..3649491) 1 NC_009901.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: cte:CT0481 multiple antibiotic resistance protein; multiple antibiotic resistance (MarC)-like protein 3649491 5663368 Spea_2978 Shewanella pealeana ATCC 700345 multiple antibiotic resistance (MarC)-like protein YP_001502830.1 3648853 R 398579 CDS YP_001502831.1 157962797 5663369 complement(3649611..3652406) 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: she:Shewmr4_2719 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 3652406 5663369 Spea_2979 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001502831.1 3649611 R 398579 CDS YP_001502832.1 157962798 5663370 3652644..3653654 1 NC_009901.1 catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase 3653654 5663370 Spea_2980 Shewanella pealeana ATCC 700345 isocitrate dehydrogenase YP_001502832.1 3652644 D 398579 CDS YP_001502833.1 157962799 5663371 complement(3653750..3654832) 1 NC_009901.1 KEGG: slo:Shew_2761 hypothetical protein; putative RNA 2'-O-ribose methyltransferase 3654832 5663371 Spea_2981 Shewanella pealeana ATCC 700345 putative RNA 2'-O-ribose methyltransferase YP_001502833.1 3653750 R 398579 CDS YP_001502834.1 157962800 5663372 complement(3655074..3655460) 1 NC_009901.1 PFAM: protein of unknown function DUF423; KEGG: slo:Shew_2762 protein of unknown function DUF423; hypothetical protein 3655460 5663372 Spea_2982 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502834.1 3655074 R 398579 CDS YP_001502835.1 157962801 5663373 complement(3655537..3656271) 1 NC_009901.1 KEGG: slo:Shew_2763 dienelactone hydrolase; alpha/beta hydrolase 3656271 5663373 Spea_2983 Shewanella pealeana ATCC 700345 alpha/beta hydrolase YP_001502835.1 3655537 R 398579 CDS YP_001502836.1 157962802 5663374 complement(3656252..3657163) 1 NC_009901.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 3657163 5663374 Spea_2984 Shewanella pealeana ATCC 700345 DNA-binding transcriptional activator GcvA YP_001502836.1 3656252 R 398579 CDS YP_001502837.1 157962803 5663375 3657345..3657578 1 NC_009901.1 KEGG: slo:Shew_2765 hypothetical protein; hypothetical protein 3657578 5663375 Spea_2985 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502837.1 3657345 D 398579 CDS YP_001502838.1 157962804 5663376 complement(3657742..3659196) 1 NC_009901.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 3659196 5663376 Spea_2986 Shewanella pealeana ATCC 700345 thiamine biosynthesis protein ThiI YP_001502838.1 3657742 R 398579 CDS YP_001502839.1 157962805 5663377 complement(3659397..3660365) 1 NC_009901.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar motor protein MotB 3660365 motB 5663377 motB Shewanella pealeana ATCC 700345 flagellar motor protein MotB YP_001502839.1 3659397 R 398579 CDS YP_001502840.1 157962806 5663378 complement(3660370..3661137) 1 NC_009901.1 Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein PomA 3661137 5663378 Spea_2988 Shewanella pealeana ATCC 700345 flagellar motor protein PomA YP_001502840.1 3660370 R 398579 CDS YP_001502841.1 157962807 5663379 3661548..3661796 1 NC_009901.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: sbl:Sbal_1359 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 3661796 5663379 Spea_2989 Shewanella pealeana ATCC 700345 exodeoxyribonuclease VII small subunit YP_001502841.1 3661548 D 398579 CDS YP_001502842.1 157962808 5663380 3661797..3662678 1 NC_009901.1 PFAM: Polyprenyl synthetase; KEGG: slo:Shew_2770 polyprenyl synthetase; polyprenyl synthetase 3662678 5663380 Spea_2990 Shewanella pealeana ATCC 700345 polyprenyl synthetase YP_001502842.1 3661797 D 398579 CDS YP_001502843.1 157962809 5663381 3662701..3664566 1 NC_009901.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 3664566 5663381 Spea_2991 Shewanella pealeana ATCC 700345 1-deoxy-D-xylulose-5-phosphate synthase YP_001502843.1 3662701 D 398579 CDS YP_001502844.1 157962810 5663382 complement(3664697..3665299) 1 NC_009901.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 3665299 5663382 Spea_2992 Shewanella pealeana ATCC 700345 heat shock protein GrpE YP_001502844.1 3664697 R 398579 CDS YP_001502845.1 157962811 5663383 3665400..3666278 1 NC_009901.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 3666278 ppnK 5663383 ppnK Shewanella pealeana ATCC 700345 inorganic polyphosphate/ATP-NAD kinase YP_001502845.1 3665400 D 398579 CDS YP_001502846.1 157962812 5663384 3666988..3668631 1 NC_009901.1 PFAM: L-lactate permease; KEGG: slo:Shew_3135 L-lactate permease; L-lactate permease 3668631 5663384 Spea_2994 Shewanella pealeana ATCC 700345 L-lactate permease YP_001502846.1 3666988 D 398579 CDS YP_001502847.1 157962813 5663385 3668740..3671559 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: shn:Shewana3_2905 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 3671559 5663385 Spea_2995 Shewanella pealeana ATCC 700345 FAD linked oxidase domain-containing protein YP_001502847.1 3668740 D 398579 CDS YP_001502848.1 157962814 5663386 3671949..3672692 1 NC_009901.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: slo:Shew_3004 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 3672692 5663386 Spea_2996 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502848.1 3671949 D 398579 CDS YP_001502849.1 157962815 5663387 3672701..3674074 1 NC_009901.1 PFAM: protein of unknown function DUF162; KEGG: slo:Shew_3005 4Fe-4S ferredoxin, iron-sulfur binding domain protein; hypothetical protein 3674074 5663387 Spea_2997 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502849.1 3672701 D 398579 CDS YP_001502850.1 157962816 5663388 3674079..3674648 1 NC_009901.1 PFAM: protein of unknown function DUF162; KEGG: shm:Shewmr7_2816 protein of unknown function DUF162; hypothetical protein 3674648 5663388 Spea_2998 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502850.1 3674079 D 398579 CDS YP_001502851.1 157962817 5663389 complement(3674780..3675970) 1 NC_009901.1 TIGRFAM: TonB family protein; KEGG: son:SO_4043 TonB domain protein; TonB family protein 3675970 5663389 Spea_2999 Shewanella pealeana ATCC 700345 TonB family protein YP_001502851.1 3674780 R 398579 CDS YP_001502852.1 157962818 5663390 complement(3676168..3677544) 1 NC_009901.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO_1506 MATE efflux family protein; MATE efflux family protein 3677544 5663390 Spea_3000 Shewanella pealeana ATCC 700345 MATE efflux family protein YP_001502852.1 3676168 R 398579 CDS YP_001502853.1 157962819 5663391 complement(3677702..3678838) 1 NC_009901.1 PFAM: cobalamin synthesis protein P47K; KEGG: spc:Sputcn32_1255 cobalamin synthesis protein, P47K; cobalamin synthesis protein P47K 3678838 5663391 Spea_3001 Shewanella pealeana ATCC 700345 cobalamin synthesis protein P47K YP_001502853.1 3677702 R 398579 CDS YP_001502854.1 157962820 5663392 complement(3678953..3679294) 1 NC_009901.1 KEGG: gsu:GSU0757 lipoprotein, putative; hypothetical protein 3679294 5663392 Spea_3002 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502854.1 3678953 R 398579 CDS YP_001502855.1 157962821 5663393 3679577..3680995 1 NC_009901.1 KEGG: vpa:VPA0754 hypothetical protein; hypothetical protein 3680995 5663393 Spea_3003 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502855.1 3679577 D 398579 CDS YP_001502856.1 157962822 5663394 complement(3681118..3681465) 1 NC_009901.1 KEGG: cps:CPS_2486 hypothetical protein; hypothetical protein 3681465 5663394 Spea_3004 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502856.1 3681118 R 398579 CDS YP_001502857.1 157962823 5663395 complement(3681586..3682923) 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: shw:Sputw3181_2850 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3682923 5663395 Spea_3005 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001502857.1 3681586 R 398579 CDS YP_001502858.1 157962824 5663396 complement(3683235..3686429) 1 NC_009901.1 KEGG: shn:Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; 5TM Receptors of the LytS-YhcK type transmembrane region; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 3686429 5663396 Spea_3006 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001502858.1 3683235 R 398579 CDS YP_001502859.1 157962825 5663397 complement(3686870..3687310) 1 NC_009901.1 PFAM: OsmC family protein; KEGG: shm:Shewmr7_1143 OsmC family protein; OsmC family protein 3687310 5663397 Spea_3007 Shewanella pealeana ATCC 700345 OsmC family protein YP_001502859.1 3686870 R 398579 CDS YP_001502860.1 157962826 5663398 3687751..3688227 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: sbl:Sbal_3195 thioesterase superfamily protein; thioesterase superfamily protein 3688227 5663398 Spea_3008 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001502860.1 3687751 D 398579 CDS YP_001502861.1 157962827 5663399 complement(3688340..3689818) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: spc:Sputcn32_2800 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 3689818 5663399 Spea_3009 Shewanella pealeana ATCC 700345 diguanylate cyclase/phosphodiesterase YP_001502861.1 3688340 R 398579 CDS YP_001502862.1 157962828 5663400 complement(3689943..3690785) 1 NC_009901.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: saz:Sama_1005 putative signal transduction protein; putative signal transduction protein 3690785 5663400 Spea_3010 Shewanella pealeana ATCC 700345 putative signal transduction protein YP_001502862.1 3689943 R 398579 CDS YP_001502863.1 157962829 5663401 3691074..3692441 1 NC_009901.1 PFAM: peptidase U32; KEGG: sfr:Sfri_1022 peptidase U32; peptidase U32 3692441 5663401 Spea_3011 Shewanella pealeana ATCC 700345 peptidase U32 YP_001502863.1 3691074 D 398579 CDS YP_001502864.1 157962830 5663402 complement(3692546..3693790) 1 NC_009901.1 PFAM: Carbohydrate-selective porin OprB; KEGG: cps:CPS_0267 hypothetical protein; carbohydrate-selective porin OprB 3693790 5663402 Spea_3012 Shewanella pealeana ATCC 700345 carbohydrate-selective porin OprB YP_001502864.1 3692546 R 398579 CDS YP_001502865.1 157962831 5663403 complement(3693835..3694554) 1 NC_009901.1 KEGG: vha:VIBHAR_05705 hypothetical protein; hypothetical protein 3694554 5663403 Spea_3013 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502865.1 3693835 R 398579 CDS YP_001502866.1 157962832 5663404 complement(3694964..3696343) 1 NC_009901.1 PFAM: amidohydrolase; KEGG: slo:Shew_0983 amidohydrolase; amidohydrolase 3696343 5663404 Spea_3014 Shewanella pealeana ATCC 700345 amidohydrolase YP_001502866.1 3694964 R 398579 CDS YP_001502867.1 157962833 5663405 complement(3696561..3697571) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB0224 hypothetical protein; AraC family transcriptional regulator 3697571 5663405 Spea_3015 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001502867.1 3696561 R 398579 CDS YP_001502868.1 157962834 5663406 3697843..3698100 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: slo:Shew_2785 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3698100 5663406 Spea_3016 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001502868.1 3697843 D 398579 CDS YP_001502869.1 157962835 5663407 3698270..3699988 1 NC_009901.1 PFAM: pseudouridine synthase; KEGG: slo:Shew_2529 pseudouridine synthase; pseudouridine synthase 3699988 5663407 Spea_3017 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001502869.1 3698270 D 398579 CDS YP_001502870.1 157962836 5663408 complement(3700133..3700645) 1 NC_009901.1 PFAM: Sterol-binding domain protein; KEGG: shw:Sputw3181_1208 sterol-binding domain protein; sterol-binding domain-containing protein 3700645 5663408 Spea_3018 Shewanella pealeana ATCC 700345 sterol-binding domain-containing protein YP_001502870.1 3700133 R 398579 CDS YP_001502871.1 157962837 5663409 3700778..3701779 1 NC_009901.1 PFAM: peptidase U32; KEGG: slo:Shew_2787 peptidase U32; peptidase U32 3701779 5663409 Spea_3019 Shewanella pealeana ATCC 700345 peptidase U32 YP_001502871.1 3700778 D 398579 CDS YP_001502872.1 157962838 5663410 3701803..3702660 1 NC_009901.1 PFAM: peptidase U32; KEGG: slo:Shew_2788 peptidase U32; peptidase U32 3702660 5663410 Spea_3020 Shewanella pealeana ATCC 700345 peptidase U32 YP_001502872.1 3701803 D 398579 CDS YP_001502873.1 157962839 5663411 3703107..3704237 1 NC_009901.1 TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sfr:Sfri_3427 alcohol dehydrogenase GroES domain protein; S-(hydroxymethyl)glutathione dehydrogenase 3704237 5663411 Spea_3021 Shewanella pealeana ATCC 700345 S-(hydroxymethyl)glutathione dehydrogenase YP_001502873.1 3703107 D 398579 CDS YP_001502874.1 157962840 5663412 complement(3704358..3705062) 1 NC_009901.1 KEGG: shn:Shewana3_1063 hypothetical protein; hypothetical protein 3705062 5663412 Spea_3022 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502874.1 3704358 R 398579 CDS YP_001502875.1 157962841 5663413 3705427..3706971 1 NC_009901.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: shm:Shewmr7_2891 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer 3706971 5663413 Spea_3023 Shewanella pealeana ATCC 700345 Pas/Pac sensor containing methyl-accepting chemotaxis sensory transducer YP_001502875.1 3705427 D 398579 CDS YP_001502876.1 157962842 5663414 3707330..3708685 1 NC_009901.1 PFAM: nucleoside recognition domain protein; KEGG: slo:Shew_2790 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 3708685 5663414 Spea_3024 Shewanella pealeana ATCC 700345 nucleoside recognition domain-containing protein YP_001502876.1 3707330 D 398579 CDS YP_001502877.1 157962843 5663415 3708844..3709725 1 NC_009901.1 PFAM: metallophosphoesterase; KEGG: sfr:Sfri_2266 metallophosphoesterase; metallophosphoesterase 3709725 5663415 Spea_3025 Shewanella pealeana ATCC 700345 metallophosphoesterase YP_001502877.1 3708844 D 398579 CDS YP_001502878.1 157962844 5663416 complement(3709871..3711229) 1 NC_009901.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: slo:Shew_2795 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 3711229 5663416 Spea_3026 Shewanella pealeana ATCC 700345 xanthine/uracil/vitamin C permease YP_001502878.1 3709871 R 398579 CDS YP_001502879.1 157962845 5663417 complement(3711580..3712824) 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: sbl:Sbal_1252 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3712824 5663417 Spea_3027 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001502879.1 3711580 R 398579 CDS YP_001502880.1 157962846 5663418 complement(3712934..3713932) 1 NC_009901.1 KEGG: hch:HCH_00820 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter periplasmic protein 3713932 5663418 Spea_3028 Shewanella pealeana ATCC 700345 amino acid ABC transporter periplasmic protein YP_001502880.1 3712934 R 398579 CDS YP_001502881.1 157962847 5663419 3714085..3715350 1 NC_009901.1 KEGG: vfi:VF2363 glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde 3-phosphate dehydrogenase 3715350 5663419 Spea_3029 Shewanella pealeana ATCC 700345 glyceraldehyde 3-phosphate dehydrogenase YP_001502881.1 3714085 D 398579 CDS YP_001502882.1 157962848 5663420 3715510..3716079 1 NC_009901.1 KEGG: vpa:VPA0078 hypothetical protein; hypothetical protein 3716079 5663420 Spea_3030 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502882.1 3715510 D 398579 CDS YP_001502883.1 157962849 5663421 3716239..3716646 1 NC_009901.1 PFAM: type IV pilus assembly PilZ; KEGG: shw:Sputw3181_1198 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3716646 5663421 Spea_3031 Shewanella pealeana ATCC 700345 type IV pilus assembly PilZ YP_001502883.1 3716239 D 398579 CDS YP_001502884.1 157962850 5663422 complement(3716761..3718134) 1 NC_009901.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3718134 5663422 Spea_3032 Shewanella pealeana ATCC 700345 DNA repair protein RadA YP_001502884.1 3716761 R 398579 CDS YP_001502885.1 157962851 5663423 3718285..3720702 1 NC_009901.1 PFAM: type IV pilus assembly PilZ; KEGG: slo:Shew_2808 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3720702 5663423 Spea_3033 Shewanella pealeana ATCC 700345 type IV pilus assembly PilZ YP_001502885.1 3718285 D 398579 CDS YP_001502886.1 157962852 5663424 complement(3720794..3721255) 1 NC_009901.1 KEGG: vco:VC0395_A1179 hypothetical protein; hypothetical protein 3721255 5663424 Spea_3034 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502886.1 3720794 R 398579 CDS YP_001502887.1 157962853 5663425 3721676..3722407 1 NC_009901.1 PFAM: SNARE associated Golgi protein; KEGG: vfi:VFA0471 DedA family protein; hypothetical protein 3722407 5663425 Spea_3035 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502887.1 3721676 D 398579 CDS YP_001502888.1 157962854 5663426 complement(3722797..3724632) 1 NC_009901.1 PFAM: sulfatase; KEGG: shw:Sputw3181_0059 sulfatase; sulfatase 3724632 5663426 Spea_3036 Shewanella pealeana ATCC 700345 sulfatase YP_001502888.1 3722797 R 398579 CDS YP_001502889.1 157962855 5663427 complement(3724874..3725821) 1 NC_009901.1 PFAM: Polysulphide reductase NrfD; KEGG: shm:Shewmr7_0509 polysulphide reductase, NrfD; polysulfide reductase NrfD 3725821 5663427 Spea_3037 Shewanella pealeana ATCC 700345 polysulfide reductase NrfD YP_001502889.1 3724874 R 398579 CDS YP_001502890.1 157962856 5663428 complement(3725818..3726390) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shn:Shewana3_3618 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3726390 5663428 Spea_3038 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001502890.1 3725818 R 398579 CDS YP_001502891.1 157962857 5663429 complement(3726403..3728679) 1 NC_009901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sbm:Shew185_0531 molybdopterin oxidoreductase; molybdopterin oxidoreductase 3728679 5663429 Spea_3039 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase YP_001502891.1 3726403 R 398579 CDS YP_001502892.1 157962858 5663430 complement(3729023..3730807) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_3861 histidine kinase; histidine kinase 3730807 5663430 Spea_3040 Shewanella pealeana ATCC 700345 histidine kinase YP_001502892.1 3729023 R 398579 CDS YP_001502893.1 157962859 5663431 3731040..3731651 1 NC_009901.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: shw:Sputw3181_3638 response regulator receiver protein; two component LuxR family transcriptional regulator 3731651 5663431 Spea_3041 Shewanella pealeana ATCC 700345 two component LuxR family transcriptional regulator YP_001502893.1 3731040 D 398579 CDS YP_001502894.1 157962860 5663432 complement(3731722..3732630) 1 NC_009901.1 KEGG: slo:Shew_2809 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3732630 5663432 Spea_3042 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001502894.1 3731722 R 398579 CDS YP_001502895.1 157962861 5663433 complement(3732940..3733947) 1 NC_009901.1 KEGG: sbm:Shew185_3223 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3733947 5663433 Spea_3043 Shewanella pealeana ATCC 700345 phosphoserine phosphatase SerB YP_001502895.1 3732940 R 398579 CDS YP_001502896.1 157962862 5663434 3734026..3735138 1 NC_009901.1 KEGG: she:Shewmr4_1041 membrane protein; membrane protein 3735138 5663434 Spea_3044 Shewanella pealeana ATCC 700345 membrane protein YP_001502896.1 3734026 D 398579 CDS YP_001502897.1 157962863 5663435 complement(3735219..3735929) 1 NC_009901.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 3735929 deoD 5663435 deoD Shewanella pealeana ATCC 700345 purine nucleoside phosphorylase YP_001502897.1 3735219 R 398579 CDS YP_001502898.1 157962864 5663436 complement(3736028..3737245) 1 NC_009901.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3737245 5663436 Spea_3046 Shewanella pealeana ATCC 700345 phosphopentomutase YP_001502898.1 3736028 R 398579 CDS YP_001502899.1 157962865 5663437 complement(3737259..3738590) 1 NC_009901.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 3738590 deoA 5663437 deoA Shewanella pealeana ATCC 700345 thymidine phosphorylase YP_001502899.1 3737259 R 398579 CDS YP_001502900.1 157962866 5663438 complement(3738752..3739525) 1 NC_009901.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3739525 5663438 Spea_3048 Shewanella pealeana ATCC 700345 deoxyribose-phosphate aldolase YP_001502900.1 3738752 R 398579 CDS YP_001502901.1 157962867 5663439 complement(3740090..3740953) 1 NC_009901.1 PFAM: nucleoside-specific channel-forming protein Tsx; KEGG: son:SO_1215 outer membrane protein OmpK, putative; nucleoside-specific channel-forming protein Tsx 3740953 5663439 Spea_3049 Shewanella pealeana ATCC 700345 nucleoside-specific channel-forming protein Tsx YP_001502901.1 3740090 R 398579 CDS YP_001502902.1 157962868 5663440 complement(3741294..3742553) 1 NC_009901.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: sbm:Shew185_3232 nucleoside transporter; nucleoside transporter 3742553 5663440 Spea_3050 Shewanella pealeana ATCC 700345 nucleoside transporter YP_001502902.1 3741294 R 398579 CDS YP_001502903.1 157962869 5663441 complement(3742733..3743506) 1 NC_009901.1 PFAM: TatD-related deoxyribonuclease; KEGG: saz:Sama_0970 TatD-related deoxyribonuclease; TatD-like deoxyribonuclease 3743506 5663441 Spea_3051 Shewanella pealeana ATCC 700345 TatD-like deoxyribonuclease YP_001502903.1 3742733 R 398579 CDS YP_001502904.1 157962870 5663442 complement(3743532..3743792) 1 NC_009901.1 KEGG: sbl:Sbal_3231 hypothetical protein; hypothetical protein 3743792 5663442 Spea_3052 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502904.1 3743532 R 398579 CDS YP_001502905.1 157962871 5663443 complement(3743934..3745514) 1 NC_009901.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 3745514 prfC 5663443 prfC Shewanella pealeana ATCC 700345 peptide chain release factor 3 YP_001502905.1 3743934 R 398579 CDS YP_001502906.1 157962872 5663444 complement(3745676..3746569) 1 NC_009901.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 3746569 5663444 Spea_3054 Shewanella pealeana ATCC 700345 lipoprotein NlpI YP_001502906.1 3745676 R 398579 CDS YP_001502907.1 157962873 5663445 complement(3746741..3748855) 1 NC_009901.1 KEGG: slo:Shew_2822 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 3748855 5663445 Spea_3055 Shewanella pealeana ATCC 700345 polynucleotide phosphorylase/polyadenylase YP_001502907.1 3746741 R 398579 CDS YP_001502908.1 157962874 5663446 3749052..3751091 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: sbm:Shew185_3276 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 3751091 5663446 Spea_3056 Shewanella pealeana ATCC 700345 diguanylate cyclase/phosphodiesterase YP_001502908.1 3749052 D 398579 CDS YP_001502909.1 157962875 5663447 complement(3751292..3751561) 1 NC_009901.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3751561 rpsO 5663447 rpsO Shewanella pealeana ATCC 700345 30S ribosomal protein S15 YP_001502909.1 3751292 R 398579 CDS YP_001502910.1 157962876 5663448 complement(3751683..3752630) 1 NC_009901.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 3752630 truB 5663448 truB Shewanella pealeana ATCC 700345 tRNA pseudouridine synthase B YP_001502910.1 3751683 R 398579 CDS YP_001502911.1 157962877 5663449 complement(3752630..3753058) 1 NC_009901.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3753058 rbfA 5663449 rbfA Shewanella pealeana ATCC 700345 ribosome-binding factor A YP_001502911.1 3752630 R 398579 CDS YP_001502912.1 157962878 5663450 complement(3753125..3755815) 1 NC_009901.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3755815 infB 5663450 infB Shewanella pealeana ATCC 700345 translation initiation factor IF-2 YP_001502912.1 3753125 R 398579 CDS YP_001502913.1 157962879 5663451 complement(3755843..3757342) 1 NC_009901.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 3757342 nusA 5663451 nusA Shewanella pealeana ATCC 700345 transcription elongation factor NusA YP_001502913.1 3755843 R 398579 CDS YP_001502914.1 157962880 5663452 complement(3757370..3757825) 1 NC_009901.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 3757825 5663452 Spea_3062 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502914.1 3757370 R 398579 CDS YP_001502915.1 157962881 5664800 complement(3758364..3758699) 1 NC_009901.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: slo:Shew_2830 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 3758699 secG 5664800 secG Shewanella pealeana ATCC 700345 preprotein translocase subunit SecG YP_001502915.1 3758364 R 398579 CDS YP_001502916.1 157962882 5663454 complement(3758701..3759483) 1 NC_009901.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 3759483 5663454 Spea_3064 Shewanella pealeana ATCC 700345 triosephosphate isomerase YP_001502916.1 3758701 R 398579 CDS YP_001502917.1 157962883 5663455 complement(3759680..3761017) 1 NC_009901.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3761017 glmM 5663455 glmM Shewanella pealeana ATCC 700345 phosphoglucosamine mutase YP_001502917.1 3759680 R 398579 CDS YP_001502918.1 157962884 5663456 complement(3761117..3761959) 1 NC_009901.1 KEGG: shm:Shewmr7_1085 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 3761959 5663456 Spea_3066 Shewanella pealeana ATCC 700345 dihydropteroate synthase YP_001502918.1 3761117 R 398579 CDS YP_001502919.1 157962885 5663457 complement(3762018..3763970) 1 NC_009901.1 KEGG: slo:Shew_2834 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 3763970 5663457 Spea_3067 Shewanella pealeana ATCC 700345 ATP-dependent metalloprotease FtsH YP_001502919.1 3762018 R 398579 CDS YP_001502920.1 157962886 5663458 complement(3764031..3764660) 1 NC_009901.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 3764660 rrmJ 5663458 rrmJ Shewanella pealeana ATCC 700345 23S rRNA methyltransferase J YP_001502920.1 3764031 R 398579 CDS YP_001502921.1 157962887 5663459 3764754..3765053 1 NC_009901.1 PFAM: protein of unknown function UPF0044; KEGG: slo:Shew_2836 protein of unknown function UPF0044; hypothetical protein 3765053 5663459 Spea_3069 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502921.1 3764754 D 398579 CDS YP_001502922.1 157962888 5663460 complement(3765146..3766054) 1 NC_009901.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: sbm:Shew185_3291 protein-export membrane protein SecF; protein-export membrane protein SecF 3766054 5663460 Spea_3070 Shewanella pealeana ATCC 700345 protein-export membrane protein SecF YP_001502922.1 3765146 R 398579 CDS YP_001502923.1 157962889 5663461 complement(3766056..3767870) 1 NC_009901.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3767870 secD 5663461 secD Shewanella pealeana ATCC 700345 preprotein translocase subunit SecD YP_001502923.1 3766056 R 398579 CDS YP_001502924.1 157962890 5663462 complement(3768172..3768672) 1 NC_009901.1 KEGG: sfr:Sfri_0978 hypothetical protein; hypothetical protein 3768672 5663462 Spea_3072 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502924.1 3768172 R 398579 CDS YP_001502925.1 157962891 5663463 complement(3768827..3769303) 1 NC_009901.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: shn:Shewana3_1017 transcription elongation factor GreA; transcription elongation factor GreA 3769303 5663463 Spea_3073 Shewanella pealeana ATCC 700345 transcription elongation factor GreA YP_001502925.1 3768827 R 398579 CDS YP_001502926.1 157962892 5663464 complement(3769661..3772882) 1 NC_009901.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 3772882 carB 5663464 carB Shewanella pealeana ATCC 700345 carbamoyl phosphate synthase large subunit YP_001502926.1 3769661 R 398579 CDS YP_001502927.1 157962893 5663465 complement(3772911..3774056) 1 NC_009901.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 3774056 5663465 Spea_3075 Shewanella pealeana ATCC 700345 carbamoyl phosphate synthase small subunit YP_001502927.1 3772911 R 398579 CDS YP_001502928.1 157962894 5663466 complement(3774250..3775074) 1 NC_009901.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3775074 5663466 Spea_3076 Shewanella pealeana ATCC 700345 dihydrodipicolinate reductase YP_001502928.1 3774250 R 398579 CDS YP_001502929.1 157962895 5663467 complement(3775138..3775755) 1 NC_009901.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: slo:Shew_2841 peptidylprolyl isomerase, FKBP-type; FKBP-type peptidylprolyl isomerase 3775755 5663467 Spea_3077 Shewanella pealeana ATCC 700345 FKBP-type peptidylprolyl isomerase YP_001502929.1 3775138 R 398579 CDS YP_001502930.1 157962896 5663468 complement(3775838..3776638) 1 NC_009901.1 PFAM: peptidase M48 Ste24p; KEGG: son:SO_1137 hypothetical protein; peptidase M48 Ste24p 3776638 5663468 Spea_3078 Shewanella pealeana ATCC 700345 peptidase M48 Ste24p YP_001502930.1 3775838 R 398579 CDS YP_001502931.1 157962897 5663469 complement(3776761..3777891) 1 NC_009901.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 3777891 5663469 Spea_3079 Shewanella pealeana ATCC 700345 chaperone protein DnaJ YP_001502931.1 3776761 R 398579 CDS YP_001502932.1 157962898 5663470 complement(3777981..3779897) 1 NC_009901.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 3779897 dnaK 5663470 dnaK Shewanella pealeana ATCC 700345 molecular chaperone DnaK YP_001502932.1 3777981 R 398579 CDS YP_001502933.1 157962899 5663471 3780204..3781118 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: slo:Shew_2845 protein of unknown function DUF6, transmembrane; hypothetical protein 3781118 5663471 Spea_3081 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502933.1 3780204 D 398579 CDS YP_001502934.1 157962900 5663472 complement(3781169..3781897) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 3781897 5663472 Spea_3082 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001502934.1 3781169 R 398579 CDS YP_001502935.1 157962901 5663473 complement(3782014..3782397) 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 3782397 5663473 Spea_3083 Shewanella pealeana ATCC 700345 transposase YP_001502935.1 3782014 R 398579 CDS YP_001502936.1 157962902 5663474 complement(3783022..3784287) 1 NC_009901.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3784287 proA 5663474 proA Shewanella pealeana ATCC 700345 gamma-glutamyl phosphate reductase YP_001502936.1 3783022 R 398579 CDS YP_001502937.1 157962903 5663475 complement(3784284..3785402) 1 NC_009901.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3785402 5663475 Spea_3085 Shewanella pealeana ATCC 700345 gamma-glutamyl kinase YP_001502937.1 3784284 R 398579 CDS YP_001502938.1 157962904 5663476 complement(3785671..3786960) 1 NC_009901.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: saz:Sama_2517 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 3786960 5663476 Spea_3086 Shewanella pealeana ATCC 700345 xanthine/uracil/vitamin C permease YP_001502938.1 3785671 R 398579 CDS YP_001502939.1 157962905 5663477 complement(3787762..3789579) 1 NC_009901.1 KEGG: saz:Sama_1111 ATP-dependent endonuclease of the OLD family; ATP-dependent OLD family endonuclease 3789579 5663477 Spea_3087 Shewanella pealeana ATCC 700345 ATP-dependent OLD family endonuclease YP_001502939.1 3787762 R 398579 CDS YP_001502940.1 157962906 5664801 complement(3791519..3791632) 1 NC_009901.1 KEGG: sbm:Shew185_3420 hypothetical protein; hypothetical protein 3791632 5664801 Spea_3089 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502940.1 3791519 R 398579 CDS YP_001502941.1 157962907 5663479 complement(3792760..3794298) 1 NC_009901.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: spc:Sputcn32_0955 peptidase M17, leucyl aminopeptidase domain protein; peptidase M17 leucyl aminopeptidase domain-containing protein 3794298 5663479 Spea_3090 Shewanella pealeana ATCC 700345 peptidase M17 leucyl aminopeptidase domain-containing protein YP_001502941.1 3792760 R 398579 CDS YP_001502942.1 157962908 5663480 3794531..3795991 1 NC_009901.1 KEGG: she:Shewmr4_0948 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 3795991 5663480 Spea_3091 Shewanella pealeana ATCC 700345 aminoacyl-histidine dipeptidase YP_001502942.1 3794531 D 398579 CDS YP_001502943.1 157962909 5663481 complement(3796092..3797168) 1 NC_009901.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3797168 5663481 Spea_3092 Shewanella pealeana ATCC 700345 DNA polymerase IV YP_001502943.1 3796092 R 398579 CDS YP_001502944.1 157962910 5663482 complement(3797424..3797663) 1 NC_009901.1 hypothetical protein 3797663 5663482 Spea_3093 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502944.1 3797424 R 398579 CDS YP_001502945.1 157962911 5663483 complement(3797913..3798380) 1 NC_009901.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: slo:Shew_2872 bacterioferritin; bacterioferritin 3798380 5663483 Spea_3094 Shewanella pealeana ATCC 700345 bacterioferritin YP_001502945.1 3797913 R 398579 CDS YP_001502946.1 157962912 5663484 complement(3798393..3798860) 1 NC_009901.1 TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: slo:Shew_2873 bacterioferritin; bacterioferritin 3798860 5663484 Spea_3095 Shewanella pealeana ATCC 700345 bacterioferritin YP_001502946.1 3798393 R 398579 CDS YP_001502947.1 157962913 5663485 complement(3799195..3799416) 1 NC_009901.1 PFAM: protein of unknown function DUF539; KEGG: slo:Shew_2874 protein of unknown function DUF539; hypothetical protein 3799416 5663485 Spea_3096 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502947.1 3799195 R 398579 CDS YP_001502948.1 157962914 5663486 complement(3799429..3800445) 1 NC_009901.1 PFAM: ApbE family lipoprotein; KEGG: she:Shewmr4_0942 ApbE family lipoprotein; ApbE family lipoprotein 3800445 5663486 Spea_3097 Shewanella pealeana ATCC 700345 ApbE family lipoprotein YP_001502948.1 3799429 R 398579 CDS YP_001502949.1 157962915 5663487 complement(3800475..3801722) 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 3801722 5663487 Spea_3098 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit F YP_001502949.1 3800475 R 398579 CDS YP_001502950.1 157962916 5663488 complement(3801770..3802378) 1 NC_009901.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 3802378 5663488 Spea_3099 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit E YP_001502950.1 3801770 R 398579 CDS YP_001502951.1 157962917 5663489 complement(3802384..3803016) 1 NC_009901.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 3803016 5663489 Spea_3100 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit D YP_001502951.1 3802384 R 398579 CDS YP_001502952.1 157962918 5663490 complement(3803016..3803810) 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 3803810 5663490 Spea_3101 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit C YP_001502952.1 3803016 R 398579 CDS YP_001502953.1 157962919 5663491 complement(3803803..3805002) 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 3805002 5663491 Spea_3102 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit B YP_001502953.1 3803803 R 398579 CDS YP_001502954.1 157962920 5663492 complement(3805002..3806336) 1 NC_009901.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 3806336 5663492 Spea_3103 Shewanella pealeana ATCC 700345 Na(+)-translocating NADH-quinone reductase subunit A YP_001502954.1 3805002 R 398579 CDS YP_001502955.1 157962921 5663493 complement(3806980..3807489) 1 NC_009901.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 3807489 5663493 Spea_3104 Shewanella pealeana ATCC 700345 S-ribosylhomocysteinase YP_001502955.1 3806980 R 398579 CDS YP_001502956.1 157962922 5663494 complement(3807802..3808101) 1 NC_009901.1 PFAM: BolA family protein; KEGG: slo:Shew_2883 BolA family protein; BolA family protein 3808101 5663494 Spea_3105 Shewanella pealeana ATCC 700345 BolA family protein YP_001502956.1 3807802 R 398579 CDS YP_001502957.1 157962923 5663495 complement(3808223..3808930) 1 NC_009901.1 KEGG: sbl:Sbal_0919 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 3808930 5663495 Spea_3106 Shewanella pealeana ATCC 700345 2OG-Fe(II) oxygenase YP_001502957.1 3808223 R 398579 CDS YP_001502958.1 157962924 5663496 3809096..3810370 1 NC_009901.1 PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: shw:Sputw3181_3242 rRNA (guanine-N(2)-)-methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 3810370 5663496 Spea_3107 Shewanella pealeana ATCC 700345 rRNA (guanine-N(2)-)-methyltransferase YP_001502958.1 3809096 D 398579 CDS YP_001502959.1 157962925 5663497 complement(3810468..3811415) 1 NC_009901.1 PFAM: fatty acid hydroxylase; KEGG: sbm:Shew185_3594 sterol desaturase family protein; fatty acid hydroxylase 3811415 5663497 Spea_3108 Shewanella pealeana ATCC 700345 fatty acid hydroxylase YP_001502959.1 3810468 R 398579 CDS YP_001502960.1 157962926 5663498 complement(3811523..3812587) 1 NC_009901.1 KEGG: slo:Shew_2888 hypothetical protein; hypothetical protein 3812587 5663498 Spea_3109 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502960.1 3811523 R 398579 CDS YP_001502961.1 157962927 5663499 3812826..3813431 1 NC_009901.1 PFAM: Uncharacterized lipoprotein; KEGG: slo:Shew_2889 uncharacterized lipoprotein; hypothetical protein 3813431 5663499 Spea_3110 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502961.1 3812826 D 398579 CDS YP_001502962.1 157962928 5663500 3813481..3814140 1 NC_009901.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sfr:Sfri_3112 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 3814140 5663500 Spea_3111 Shewanella pealeana ATCC 700345 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001502962.1 3813481 D 398579 CDS YP_001502963.1 157962929 5663501 3814259..3814579 1 NC_009901.1 KEGG: slo:Shew_2891 hypothetical protein; hypothetical protein 3814579 5663501 Spea_3112 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502963.1 3814259 D 398579 CDS YP_001502964.1 157962930 5663502 3815049..3816479 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: slo:Shew_2892 major facilitator superfamily MFS_1; major facilitator transporter 3816479 5663502 Spea_3113 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001502964.1 3815049 D 398579 CDS YP_001502965.1 157962931 5663503 complement(3816716..3817201) 1 NC_009901.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 3817201 5663503 Spea_3114 Shewanella pealeana ATCC 700345 putative nucleotide-binding protein YP_001502965.1 3816716 R 398579 CDS YP_001502966.1 157962932 5663504 3817303..3817731 1 NC_009901.1 PFAM: VanZ family protein; KEGG: slo:Shew_2894 VanZ family protein; VanZ family protein 3817731 5663504 Spea_3115 Shewanella pealeana ATCC 700345 VanZ family protein YP_001502966.1 3817303 D 398579 CDS YP_001502967.1 157962933 5663505 3817738..3818769 1 NC_009901.1 KEGG: slo:Shew_2895 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 3818769 5663505 Spea_3116 Shewanella pealeana ATCC 700345 2-dehydropantoate 2-reductase YP_001502967.1 3817738 D 398579 CDS YP_001502968.1 157962934 5663506 3818940..3820439 1 NC_009901.1 PFAM: sodium:neurotransmitter symporter; KEGG: ppr:PBPRA1510 putative sodium-dependent transporter; sodium:neurotransmitter symporter 3820439 5663506 Spea_3117 Shewanella pealeana ATCC 700345 sodium:neurotransmitter symporter YP_001502968.1 3818940 D 398579 CDS YP_001502969.1 157962935 5663507 3820639..3821346 1 NC_009901.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: slo:Shew_2901 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 3821346 5663507 Spea_3118 Shewanella pealeana ATCC 700345 PA-phosphatase-like phosphoesterase YP_001502969.1 3820639 D 398579 CDS YP_001502970.1 157962936 5663508 complement(3821350..3822225) 1 NC_009901.1 KEGG: sbl:Sbal_0704 hypothetical protein; hypothetical protein 3822225 5663508 Spea_3119 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502970.1 3821350 R 398579 CDS YP_001502971.1 157962937 5663509 complement(3822410..3823972) 1 NC_009901.1 PFAM: AbgT putative transporter; short chain fatty acid transporter; KEGG: saz:Sama_3423 transporter; putative transporter AbgT 3823972 5663509 Spea_3120 Shewanella pealeana ATCC 700345 putative transporter AbgT YP_001502971.1 3822410 R 398579 CDS YP_001502972.1 157962938 5663510 complement(3824190..3825038) 1 NC_009901.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 3825038 5663510 Spea_3121 Shewanella pealeana ATCC 700345 2-dehydro-3-deoxyphosphooctonate aldolase YP_001502972.1 3824190 R 398579 CDS YP_001502973.1 157962939 5663511 complement(3825108..3826376) 1 NC_009901.1 PFAM: protein of unknown function DUF819; KEGG: slo:Shew_2905 protein of unknown function DUF819; hypothetical protein 3826376 5663511 Spea_3122 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502973.1 3825108 R 398579 CDS YP_001502974.1 157962940 5663512 complement(3826590..3827378) 1 NC_009901.1 KEGG: slo:Shew_2906 hypothetical protein; hypothetical protein 3827378 5663512 Spea_3123 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502974.1 3826590 R 398579 CDS YP_001502975.1 157962941 5663513 complement(3827378..3827773) 1 NC_009901.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: son:SO_3830 hypothetical protein; invasion gene expression up-regulator SirB 3827773 5663513 Spea_3124 Shewanella pealeana ATCC 700345 invasion gene expression up-regulator SirB YP_001502975.1 3827378 R 398579 CDS YP_001502976.1 157962942 5663514 complement(3828059..3828901) 1 NC_009901.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: slo:Shew_2911 modification methylase, HemK family; HemK family modification methylase 3828901 5663514 Spea_3125 Shewanella pealeana ATCC 700345 HemK family modification methylase YP_001502976.1 3828059 R 398579 CDS YP_001502977.1 157962943 5663515 complement(3828949..3830034) 1 NC_009901.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 3830034 prfA 5663515 prfA Shewanella pealeana ATCC 700345 peptide chain release factor 1 YP_001502977.1 3828949 R 398579 CDS YP_001502978.1 157962944 5663516 complement(3830048..3831298) 1 NC_009901.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 3831298 hemA 5663516 hemA Shewanella pealeana ATCC 700345 glutamyl-tRNA reductase YP_001502978.1 3830048 R 398579 CDS YP_001502979.1 157962945 5663517 3831568..3832227 1 NC_009901.1 PFAM: outer membrane lipoprotein LolB; KEGG: sbm:Shew185_3616 outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 3832227 5663517 Spea_3128 Shewanella pealeana ATCC 700345 outer membrane lipoprotein LolB YP_001502979.1 3831568 D 398579 CDS YP_001502980.1 157962946 5663518 3832224..3833078 1 NC_009901.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3833078 ipk 5663518 ipk Shewanella pealeana ATCC 700345 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001502980.1 3832224 D 398579 CDS YP_001502981.1 157962947 5663519 3833116..3834090 1 NC_009901.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 3834090 5663519 Spea_3130 Shewanella pealeana ATCC 700345 ribose-phosphate pyrophosphokinase YP_001502981.1 3833116 D 398579 CDS YP_001502982.1 157962948 5663520 complement(3834174..3834599) 1 NC_009901.1 KEGG: slo:Shew_2917 hypothetical protein; hypothetical protein 3834599 5663520 Spea_3131 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502982.1 3834174 R 398579 CDS YP_001502983.1 157962949 5663521 complement(3834636..3835052) 1 NC_009901.1 KEGG: slo:Shew_2918 hypothetical protein; hypothetical protein 3835052 5663521 Spea_3132 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502983.1 3834636 R 398579 CDS YP_001502984.1 157962950 5664814 complement(3837555..3838646) 1 NC_009901.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3838646 5664814 Spea_3133 Shewanella pealeana ATCC 700345 GTP-dependent nucleic acid-binding protein EngD YP_001502984.1 3837555 R 398579 CDS YP_001502985.1 157962951 5663523 complement(3838700..3839326) 1 NC_009901.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 3839326 5663523 Spea_3134 Shewanella pealeana ATCC 700345 peptidyl-tRNA hydrolase YP_001502985.1 3838700 R 398579 CDS YP_001502986.1 157962952 5663524 complement(3839549..3840748) 1 NC_009901.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: slo:Shew_2921 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3840748 5663524 Spea_3135 Shewanella pealeana ATCC 700345 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001502986.1 3839549 R 398579 CDS YP_001502987.1 157962953 5663525 3841058..3841372 1 NC_009901.1 KEGG: sbm:Shew185_3302 hypothetical protein; hypothetical protein 3841372 5663525 Spea_3136 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502987.1 3841058 D 398579 CDS YP_001502988.1 157962954 5663526 3841468..3842895 1 NC_009901.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3842895 5663526 Spea_3137 Shewanella pealeana ATCC 700345 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001502988.1 3841468 D 398579 CDS YP_001502989.1 157962955 5663527 3843057..3844097 1 NC_009901.1 PFAM: PhoH family protein; KEGG: slo:Shew_2924 PhoH family protein; PhoH family protein 3844097 5663527 Spea_3138 Shewanella pealeana ATCC 700345 PhoH family protein YP_001502989.1 3843057 D 398579 CDS YP_001502990.1 157962956 5663528 3844090..3844560 1 NC_009901.1 PFAM: protein of unknown function UPF0054; KEGG: sdn:Sden_0813 protein of unknown function UPF0054; putative metalloprotease 3844560 5663528 Spea_3139 Shewanella pealeana ATCC 700345 putative metalloprotease YP_001502990.1 3844090 D 398579 CDS YP_001502991.1 157962957 5663529 3844588..3845469 1 NC_009901.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: slo:Shew_2926 CBS domain containing protein; hypothetical protein 3845469 5663529 Spea_3140 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502991.1 3844588 D 398579 CDS YP_001502992.1 157962958 5663530 3845509..3847044 1 NC_009901.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3847044 lnt 5663530 lnt Shewanella pealeana ATCC 700345 apolipoprotein N-acyltransferase YP_001502992.1 3845509 D 398579 CDS YP_001502993.1 157962959 5663531 complement(3847216..3847716) 1 NC_009901.1 PFAM: protein of unknown function DUF1451; KEGG: slo:Shew_2928 protein of unknown function DUF1451; hypothetical protein 3847716 5663531 Spea_3142 Shewanella pealeana ATCC 700345 hypothetical protein YP_001502993.1 3847216 R 398579 CDS YP_001502994.1 157962960 5663532 3847810..3850416 1 NC_009901.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3850416 leuS 5663532 leuS Shewanella pealeana ATCC 700345 leucyl-tRNA synthetase YP_001502994.1 3847810 D 398579 CDS YP_001502995.1 157962961 5663533 3850449..3850943 1 NC_009901.1 PFAM: Rare lipoprotein B; KEGG: shn:Shewana3_1000 rare lipoprotein B; rare lipoprotein B 3850943 5663533 Spea_3144 Shewanella pealeana ATCC 700345 rare lipoprotein B YP_001502995.1 3850449 D 398579 CDS YP_001502996.1 157962962 5663534 3850943..3851974 1 NC_009901.1 KEGG: slo:Shew_2931 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 3851974 5663534 Spea_3145 Shewanella pealeana ATCC 700345 DNA polymerase III subunit delta YP_001502996.1 3850943 D 398579 CDS YP_001502997.1 157962963 5663535 3851974..3852624 1 NC_009901.1 KEGG: sfr:Sfri_0702 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3852624 5663535 Spea_3146 Shewanella pealeana ATCC 700345 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001502997.1 3851974 D 398579 CDS YP_001502998.1 157962964 5663536 3852723..3853052 1 NC_009901.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: sbm:Shew185_3315 iojap-like protein; iojap family protein 3853052 5663536 Spea_3147 Shewanella pealeana ATCC 700345 iojap family protein YP_001502998.1 3852723 D 398579 CDS YP_001502999.1 157962965 5663537 3853052..3853522 1 NC_009901.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3853522 5663537 Spea_3148 Shewanella pealeana ATCC 700345 rRNA large subunit methyltransferase YP_001502999.1 3853052 D 398579 CDS YP_001503000.1 157962966 5663538 3853607..3855463 1 NC_009901.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: slo:Shew_2935 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 3855463 5663538 Spea_3149 Shewanella pealeana ATCC 700345 peptidoglycan glycosyltransferase YP_001503000.1 3853607 D 398579 CDS YP_001503001.1 157962967 5663539 3855460..3856566 1 NC_009901.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: slo:Shew_2936 rod shape-determining protein RodA; rod shape-determining protein RodA 3856566 5663539 Spea_3150 Shewanella pealeana ATCC 700345 rod shape-determining protein RodA YP_001503001.1 3855460 D 398579 CDS YP_001503002.1 157962968 5663540 3856668..3857666 1 NC_009901.1 TIGRFAM: lytic murein transglycosylase B; KEGG: sbm:Shew185_3319 lytic murein transglycosylase B; lytic murein transglycosylase B 3857666 5663540 Spea_3151 Shewanella pealeana ATCC 700345 lytic murein transglycosylase B YP_001503002.1 3856668 D 398579 CDS YP_001503003.1 157962969 5663541 3857653..3858435 1 NC_009901.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: slo:Shew_2938 rare lipoprotein A; rare lipoprotein A 3858435 5663541 Spea_3152 Shewanella pealeana ATCC 700345 rare lipoprotein A YP_001503003.1 3857653 D 398579 CDS YP_001503004.1 157962970 5663542 3858541..3859713 1 NC_009901.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: slo:Shew_2939 serine-type D-Ala-D-Ala carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 3859713 5663542 Spea_3153 Shewanella pealeana ATCC 700345 serine-type D-Ala-D-Ala carboxypeptidase YP_001503004.1 3858541 D 398579 CDS YP_001503005.1 157962971 5663543 3859846..3860112 1 NC_009901.1 PFAM: protein of unknown function DUF493; KEGG: shw:Sputw3181_1029 protein of unknown function DUF493; hypothetical protein 3860112 5663543 Spea_3154 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503005.1 3859846 D 398579 CDS YP_001503006.1 157962972 5663544 3860207..3860866 1 NC_009901.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 3860866 lipB 5663544 lipB Shewanella pealeana ATCC 700345 lipoate-protein ligase B YP_001503006.1 3860207 D 398579 CDS YP_001503007.1 157962973 5663545 3860859..3861824 1 NC_009901.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3861824 5663545 Spea_3156 Shewanella pealeana ATCC 700345 lipoyl synthase YP_001503007.1 3860859 D 398579 CDS YP_001503008.1 157962974 5663546 complement(3861920..3862357) 1 NC_009901.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: shn:Shewana3_0987 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 3862357 5663546 Spea_3157 Shewanella pealeana ATCC 700345 ribosomal-protein-alanine acetyltransferase YP_001503008.1 3861920 R 398579 CDS YP_001503009.1 157962975 5663547 complement(3862357..3862704) 1 NC_009901.1 KEGG: sfr:Sfri_0690 hypothetical protein; hypothetical protein 3862704 5663547 Spea_3158 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503009.1 3862357 R 398579 CDS YP_001503010.1 157962976 5664816 complement(3863366..3864334) 1 NC_009901.1 KEGG: sco:SCO0535 hydrolase (secreted protein); hydrolase 3864334 5664816 Spea_3159 Shewanella pealeana ATCC 700345 hydrolase YP_001503010.1 3863366 R 398579 CDS YP_001503011.1 157962977 5663549 complement(3864623..3864976) 1 NC_009901.1 KEGG: vha:VIBHAR_03714 hypothetical protein; hypothetical protein 3864976 5663549 Spea_3160 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503011.1 3864623 R 398579 CDS YP_001503012.1 157962978 5663550 3865578..3866594 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 3866594 5663550 Spea_3161 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001503012.1 3865578 D 398579 CDS YP_001503013.1 157962979 5664819 3872842..3873405 1 NC_009901.1 KEGG: sbl:Sbal_1020 hypothetical protein; hypothetical protein 3873405 5664819 Spea_3162 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503013.1 3872842 D 398579 CDS YP_001503014.1 157962980 5663552 complement(3873495..3873821) 1 NC_009901.1 KEGG: slo:Shew_2947 hypothetical protein; hypothetical protein 3873821 5663552 Spea_3163 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503014.1 3873495 R 398579 CDS YP_001503015.1 157962981 5663553 complement(3874215..3876788) 1 NC_009901.1 PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: slo:Shew_2948 ATPase AAA-2 domain protein; ATPase 3876788 5663553 Spea_3164 Shewanella pealeana ATCC 700345 ATPase YP_001503015.1 3874215 R 398579 CDS YP_001503016.1 157962982 5663554 complement(3877014..3877760) 1 NC_009901.1 PFAM: protein of unknown function DUF152; KEGG: slo:Shew_2949 protein of unknown function DUF152; hypothetical protein 3877760 5663554 Spea_3165 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503016.1 3877014 R 398579 CDS YP_001503017.1 157962983 5663555 complement(3877760..3878731) 1 NC_009901.1 KEGG: slo:Shew_2950 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 3878731 5663555 Spea_3166 Shewanella pealeana ATCC 700345 RluA family pseudouridine synthase YP_001503017.1 3877760 R 398579 CDS YP_001503018.1 157962984 5663556 3878809..3879615 1 NC_009901.1 KEGG: shm:Shewmr7_3075 putative lipoprotein; putative lipoprotein 3879615 5663556 Spea_3167 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001503018.1 3878809 D 398579 CDS YP_001503019.1 157962985 5663557 complement(3879732..3881903) 1 NC_009901.1 KEGG: vvu:VV1_2366 predicted exporter of the RND superfamily; exporter of the RND superfamily protein-like protein 3881903 5663557 Spea_3168 Shewanella pealeana ATCC 700345 exporter of the RND superfamily protein-like protein YP_001503019.1 3879732 R 398579 CDS YP_001503020.1 157962986 5664820 complement(3882417..3884279) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: shn:Shewana3_0764 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3884279 5664820 Spea_3169 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001503020.1 3882417 R 398579 CDS YP_001503021.1 157962987 5663559 3884520..3885467 1 NC_009901.1 catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase 3885467 5663559 Spea_3170 Shewanella pealeana ATCC 700345 ornithine cyclodeaminase YP_001503021.1 3884520 D 398579 CDS YP_001503022.1 157962988 5663560 3885702..3886247 1 NC_009901.1 TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: slo:Shew_2956 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 3886247 5663560 Spea_3171 Shewanella pealeana ATCC 700345 ECF subfamily RNA polymerase sigma-24 factor YP_001503022.1 3885702 D 398579 CDS YP_001503023.1 157962989 5663561 3886240..3886782 1 NC_009901.1 KEGG: shn:Shewana3_0762 hypothetical protein; hypothetical protein 3886782 5663561 Spea_3172 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503023.1 3886240 D 398579 CDS YP_001503024.1 157962990 5663562 3886779..3887720 1 NC_009901.1 KEGG: sfr:Sfri_0844 hypothetical protein; hypothetical protein 3887720 5663562 Spea_3173 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503024.1 3886779 D 398579 CDS YP_001503025.1 157962991 5663563 complement(3887808..3888710) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_2959 transcriptional regulator, LysR family; LysR family transcriptional regulator 3888710 5663563 Spea_3174 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503025.1 3887808 R 398579 CDS YP_001503026.1 157962992 5663564 3889157..3894106 1 NC_009901.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: slo:Shew_2960 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 3894106 5663564 Spea_3175 Shewanella pealeana ATCC 700345 peptidase S8/S53 subtilisin kexin sedolisin YP_001503026.1 3889157 D 398579 CDS YP_001503027.1 157962993 5663565 complement(3894376..3895068) 1 NC_009901.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: shw:Sputw3181_3383 pseudouridine synthase; pseudouridine synthase 3895068 5663565 Spea_3176 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001503027.1 3894376 R 398579 CDS YP_001503028.1 157962994 5663566 3895472..3897556 1 NC_009901.1 PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: slo:Shew_2973 endothelin-converting enzyme 1; endothelin-converting protein 1 3897556 5663566 Spea_3177 Shewanella pealeana ATCC 700345 endothelin-converting protein 1 YP_001503028.1 3895472 D 398579 CDS YP_001503029.1 157962995 5663567 3897948..3898733 1 NC_009901.1 KEGG: she:Shewmr4_3180 hypothetical protein; hypothetical protein 3898733 5663567 Spea_3178 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503029.1 3897948 D 398579 CDS YP_001503030.1 157962996 5663568 3899146..3899550 1 NC_009901.1 KEGG: slo:Shew_2971 hypothetical protein; hypothetical protein 3899550 5663568 Spea_3179 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503030.1 3899146 D 398579 CDS YP_001503031.1 157962997 5663569 3899615..3900115 1 NC_009901.1 KEGG: slo:Shew_2970 hypothetical protein; hypothetical protein 3900115 5663569 Spea_3180 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503031.1 3899615 D 398579 CDS YP_001503032.1 157962998 5663570 complement(3900419..3901042) 1 NC_009901.1 PFAM: Glutathione S-transferase domain; KEGG: slo:Shew_2968 glutathione S-transferase, N-terminal domain; glutathione S-transferase domain-containing protein 3901042 5663570 Spea_3181 Shewanella pealeana ATCC 700345 glutathione S-transferase domain-containing protein YP_001503032.1 3900419 R 398579 CDS YP_001503033.1 157962999 5663571 3901284..3901820 1 NC_009901.1 PFAM: membrane-flanked domain; KEGG: spc:Sputcn32_0787 membrane-flanked domain; membrane-flanked domain-containing protein 3901820 5663571 Spea_3182 Shewanella pealeana ATCC 700345 membrane-flanked domain-containing protein YP_001503033.1 3901284 D 398579 CDS YP_001503034.1 157963000 5663572 3901981..3903129 1 NC_009901.1 KEGG: sbl:Sbal_0678 putative manganese transporter; putative manganese transporter 3903129 5663572 Spea_3183 Shewanella pealeana ATCC 700345 putative manganese transporter YP_001503034.1 3901981 D 398579 CDS YP_001503035.1 157963001 5663573 3903154..3904323 1 NC_009901.1 PFAM: beta-lactamase; KEGG: son:SO_0914 hypothetical protein; beta-lactamase 3904323 5663573 Spea_3184 Shewanella pealeana ATCC 700345 beta-lactamase YP_001503035.1 3903154 D 398579 CDS YP_001503036.1 157963002 5663574 3904421..3904894 1 NC_009901.1 PFAM: protein of unknown function DUF1456; KEGG: slo:Shew_2963 protein of unknown function DUF1456; hypothetical protein 3904894 5663574 Spea_3185 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503036.1 3904421 D 398579 CDS YP_001503037.1 157963003 5663575 3905579..3907267 1 NC_009901.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 3907267 5663575 Spea_3186 Shewanella pealeana ATCC 700345 malate dehydrogenase YP_001503037.1 3905579 D 398579 CDS YP_001503038.1 157963004 5663576 complement(3907475..3908053) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shw:Sputw3181_3558 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3908053 5663576 Spea_3187 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503038.1 3907475 R 398579 CDS YP_001503039.1 157963005 5663577 complement(3908137..3910407) 1 NC_009901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: slo:Shew_0608 molybdopterin oxidoreductase; molybdopterin oxidoreductase 3910407 5663577 Spea_3188 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase YP_001503039.1 3908137 R 398579 CDS YP_001503040.1 157963006 5663578 complement(3911023..3911226) 1 NC_009901.1 KEGG: sfr:Sfri_3147 transposase, IS4 family protein; hypothetical protein 3911226 5663578 Spea_3189 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503040.1 3911023 R 398579 CDS YP_001503041.1 157963007 5663579 complement(3911915..3912403) 1 NC_009901.1 KEGG: slo:Shew_2976 hypothetical protein; hypothetical protein 3912403 5663579 Spea_3190 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503041.1 3911915 R 398579 CDS YP_001503042.1 157963008 5663580 complement(3912433..3912957) 1 NC_009901.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sbm:Shew185_3636 phosphoesterase PA-phosphatase related; PA-phosphatase-like phosphoesterase 3912957 5663580 Spea_3191 Shewanella pealeana ATCC 700345 PA-phosphatase-like phosphoesterase YP_001503042.1 3912433 R 398579 CDS YP_001503043.1 157963009 5663581 3913143..3915026 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_2977 diguanylate cyclase; diguanylate cyclase 3915026 5663581 Spea_3192 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503043.1 3913143 D 398579 CDS YP_001503044.1 157963010 5663582 3915263..3917146 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_2977 diguanylate cyclase; diguanylate cyclase 3917146 5663582 Spea_3193 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503044.1 3915263 D 398579 CDS YP_001503045.1 157963011 5663583 3917264..3918487 1 NC_009901.1 TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: slo:Shew_2979 putative iron-sulfur cluster binding protein; putative iron-sulfur cluster-binding protein 3918487 5663583 Spea_3194 Shewanella pealeana ATCC 700345 putative iron-sulfur cluster-binding protein YP_001503045.1 3917264 D 398579 CDS YP_001503046.1 157963012 5663584 complement(3918554..3918766) 1 NC_009901.1 PFAM: protein of unknown function DUF1458; KEGG: sfr:Sfri_0829 protein of unknown function DUF1458; hypothetical protein 3918766 5663584 Spea_3195 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503046.1 3918554 R 398579 CDS YP_001503047.1 157963013 5663585 complement(3918930..3919433) 1 NC_009901.1 TIGRFAM: alkylhydroperoxidase-like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: afw:Anae109_3146 alkylhydroperoxidase-like protein, AhpD family; alkylhydroperoxidase 3919433 5663585 Spea_3196 Shewanella pealeana ATCC 700345 alkylhydroperoxidase YP_001503047.1 3918930 R 398579 CDS YP_001503048.1 157963014 5663586 3919563..3920456 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRB1577 hypothetical transcriptional regulator; LysR family transcriptional regulator 3920456 5663586 Spea_3197 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503048.1 3919563 D 398579 CDS YP_001503049.1 157963015 5663587 complement(3920537..3921103) 1 NC_009901.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shw:Sputw3181_3956 redoxin domain protein; alkyl hydroperoxide reductase 3921103 5663587 Spea_3198 Shewanella pealeana ATCC 700345 alkyl hydroperoxide reductase YP_001503049.1 3920537 R 398579 CDS YP_001503050.1 157963016 5663588 complement(3921090..3921824) 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: shw:Sputw3181_3957 DsbA oxidoreductase; DSBA oxidoreductase 3921824 5663588 Spea_3199 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001503050.1 3921090 R 398579 CDS YP_001503051.1 157963017 5663589 complement(3921955..3924012) 1 NC_009901.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: sbm:Shew185_4225 cytochrome c biogenesis protein transmembrane region; cytochrome C biogenesis transmembrane protein 3924012 5663589 Spea_3200 Shewanella pealeana ATCC 700345 cytochrome C biogenesis transmembrane protein YP_001503051.1 3921955 R 398579 CDS YP_001503052.1 157963018 5663590 complement(3924231..3924626) 1 NC_009901.1 KEGG: shw:Sputw3181_3959 hypothetical protein; hypothetical protein 3924626 5663590 Spea_3201 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503052.1 3924231 R 398579 CDS YP_001503053.1 157963019 5663591 complement(3924911..3927181) 1 NC_009901.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3927181 5663591 Spea_3202 Shewanella pealeana ATCC 700345 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_001503053.1 3924911 R 398579 CDS YP_001503054.1 157963020 5663592 3927359..3928261 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbm:Shew185_3641 transcriptional regulator, LysR family; LysR family transcriptional regulator 3928261 5663592 Spea_3203 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503054.1 3927359 D 398579 CDS YP_001503055.1 157963021 5663593 complement(3928312..3929040) 1 NC_009901.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: slo:Shew_2988 putative signal transduction protein; putative signal transduction protein 3929040 5663593 Spea_3204 Shewanella pealeana ATCC 700345 putative signal transduction protein YP_001503055.1 3928312 R 398579 CDS YP_001503056.1 157963022 5663594 complement(3929626..3930231) 1 NC_009901.1 PFAM: lipolytic protein G-D-S-L family; KEGG: saz:Sama_2630 lipolytic enzyme, G-D-S-L; GDSL family lipase 3930231 5663594 Spea_3205 Shewanella pealeana ATCC 700345 GDSL family lipase YP_001503056.1 3929626 R 398579 CDS YP_001503057.1 157963023 5663595 complement(3930329..3932182) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cps:CPS_1162 TonB-dependent vitamin B12 receptor; TonB-dependent receptor plug 3932182 5663595 Spea_3206 Shewanella pealeana ATCC 700345 TonB-dependent receptor plug YP_001503057.1 3930329 R 398579 CDS YP_001503058.1 157963024 5663596 complement(3932761..3933408) 1 NC_009901.1 KEGG: sbl:Sbal_0662 hypothetical protein; hypothetical protein 3933408 5663596 Spea_3207 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503058.1 3932761 R 398579 CDS YP_001503059.1 157963025 5663597 3933667..3934044 1 NC_009901.1 PFAM: Penicillinase repressor; KEGG: slo:Shew_2994 transcriptional repressor, CopY family; CopY family transcriptional regulator 3934044 5663597 Spea_3208 Shewanella pealeana ATCC 700345 CopY family transcriptional regulator YP_001503059.1 3933667 D 398579 CDS YP_001503060.1 157963026 5663598 3934041..3935234 1 NC_009901.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; peptidase M56 BlaR1; KEGG: slo:Shew_2995 TonB family protein; TonB family protein 3935234 5663598 Spea_3209 Shewanella pealeana ATCC 700345 TonB family protein YP_001503060.1 3934041 D 398579 CDS YP_001503061.1 157963027 5663599 complement(3935332..3936117) 1 NC_009901.1 KEGG: cps:CPS_3036 hypothetical protein; hypothetical protein 3936117 5663599 Spea_3210 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503061.1 3935332 R 398579 CDS YP_001503062.1 157963028 5663600 complement(3936609..3937130) 1 NC_009901.1 PFAM: NADPH-dependent FMN reductase; KEGG: cps:CPS_1243 FMN reductase, NADPH-dependent; NADPH-dependent FMN reductase 3937130 5663600 Spea_3211 Shewanella pealeana ATCC 700345 NADPH-dependent FMN reductase YP_001503062.1 3936609 R 398579 CDS YP_001503063.1 157963029 5663601 3937337..3938230 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: cps:CPS_1244 transcriptional regulator, LysR family; LysR family transcriptional regulator 3938230 5663601 Spea_3212 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503063.1 3937337 D 398579 CDS YP_001503064.1 157963030 5663602 3938389..3940557 1 NC_009901.1 SMART: extracellular solute-binding protein family 3; KEGG: slo:Shew_3001 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3940557 5663602 Spea_3213 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001503064.1 3938389 D 398579 CDS YP_001503065.1 157963031 5663603 complement(3940661..3941380) 1 NC_009901.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mmw:Mmwyl1_1893 pseudouridine synthase; pseudouridine synthase 3941380 5663603 Spea_3214 Shewanella pealeana ATCC 700345 pseudouridine synthase YP_001503065.1 3940661 R 398579 CDS YP_001503066.1 157963032 5663604 3941581..3942618 1 NC_009901.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3942618 5663604 Spea_3215 Shewanella pealeana ATCC 700345 dihydroorotase YP_001503066.1 3941581 D 398579 CDS YP_001503067.1 157963033 5663605 3942888..3943232 1 NC_009901.1 KEGG: slo:Shew_2639 hypothetical protein; hypothetical protein 3943232 5663605 Spea_3216 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503067.1 3942888 D 398579 CDS YP_001503068.1 157963034 5663606 complement(3943326..3944105) 1 NC_009901.1 KEGG: slo:Shew_3002 hypothetical protein; hypothetical protein 3944105 5663606 Spea_3217 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503068.1 3943326 R 398579 CDS YP_001503069.1 157963035 5663607 3944366..3944644 1 NC_009901.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: slo:Shew_3008 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 3944644 5663607 Spea_3218 Shewanella pealeana ATCC 700345 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001503069.1 3944366 D 398579 CDS YP_001503070.1 157963036 5663608 complement(3944934..3946013) 1 NC_009901.1 PFAM: glucose sorbosone dehydrogenase; KEGG: ppr:PBPRB1412 hypothetical glucose dehydrogenase; glucose sorbosone dehydrogenase 3946013 5663608 Spea_3219 Shewanella pealeana ATCC 700345 glucose sorbosone dehydrogenase YP_001503070.1 3944934 R 398579 CDS YP_001503071.1 157963037 5663609 complement(3946456..3948450) 1 NC_009901.1 PFAM: protein of unknown function DUF1704; KEGG: slo:Shew_2900 protein of unknown function DUF1704; hypothetical protein 3948450 5663609 Spea_3220 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503071.1 3946456 R 398579 CDS YP_001503072.1 157963038 5663610 complement(3948434..3949453) 1 NC_009901.1 The second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3949453 5663610 Spea_3221 Shewanella pealeana ATCC 700345 glutathione synthetase YP_001503072.1 3948434 R 398579 CDS YP_001503073.1 157963039 5663611 3949982..3950770 1 NC_009901.1 KEGG: slo:Shew_0733 hypothetical protein; hypothetical protein 3950770 5663611 Spea_3222 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503073.1 3949982 D 398579 CDS YP_001503074.1 157963040 5663612 complement(3950863..3951894) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: vvy:VV2684 GGDEF family protein; diguanylate cyclase 3951894 5663612 Spea_3223 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503074.1 3950863 R 398579 CDS YP_001503075.1 157963041 5663613 complement(3952171..3953280) 1 NC_009901.1 TIGRFAM: putative outer membrane adhesin like proteiin; KEGG: prw:PsycPRwf_1167 putative outer membrane adhesin like proteiin; outer membrane adhesin-like protein 3953280 5663613 Spea_3224 Shewanella pealeana ATCC 700345 outer membrane adhesin-like protein YP_001503075.1 3952171 R 398579 CDS YP_001503076.1 157963042 5663614 complement(3953305..3954198) 1 NC_009901.1 hypothetical protein 3954198 5663614 Spea_3225 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503076.1 3953305 R 398579 CDS YP_001503077.1 157963043 5663615 complement(3954297..3954941) 1 NC_009901.1 PFAM: LVIVD repeat protein; LVIVD repeat-containing protein 3954941 5663615 Spea_3226 Shewanella pealeana ATCC 700345 LVIVD repeat-containing protein YP_001503077.1 3954297 R 398579 CDS YP_001503078.1 157963044 5663616 3955205..3956749 1 NC_009901.1 PFAM: ferredoxin-dependent glutamate synthase; SMART: zinc finger CDGSH-type domain protein; KEGG: vpa:VPA0765 putative glutamate synthetase; ferredoxin-dependent glutamate synthase 3956749 5663616 Spea_3227 Shewanella pealeana ATCC 700345 ferredoxin-dependent glutamate synthase YP_001503078.1 3955205 D 398579 CDS YP_001503079.1 157963045 5663617 complement(3956915..3957505) 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: sbl:Sbal_1573 HAD-superfamily hydrolase, subfamily IB (PSPase-like); HAD family hydrolase 3957505 5663617 Spea_3228 Shewanella pealeana ATCC 700345 HAD family hydrolase YP_001503079.1 3956915 R 398579 CDS YP_001503080.1 157963046 5663618 complement(3957552..3960125) 1 NC_009901.1 KEGG: sfr:Sfri_0910 UTP-GlnB uridylyltransferase, GlnD; TIGRFAM: protein-P-II uridylyltransferase; PFAM: amino acid-binding ACT domain protein; GlnD PII-uridylyltransferase; protein-P-II uridylyltransferase 3960125 5663618 Spea_3229 Shewanella pealeana ATCC 700345 protein-P-II uridylyltransferase YP_001503080.1 3957552 R 398579 CDS YP_001503081.1 157963047 5663619 3960539..3960952 1 NC_009901.1 KEGG: sdn:Sden_2069 hypothetical protein; hypothetical protein 3960952 5663619 Spea_3230 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503081.1 3960539 D 398579 CDS YP_001503082.1 157963048 5663620 complement(3960980..3961939) 1 NC_009901.1 KEGG: pin:Ping_2245 hypothetical protein; hypothetical protein 3961939 5663620 Spea_3231 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503082.1 3960980 R 398579 CDS YP_001503083.1 157963049 5663621 complement(3962085..3963554) 1 NC_009901.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: slo:Shew_3327 RNA-metabolising metallo-beta-lactamase; beta-lactamase domain-containing protein 3963554 5663621 Spea_3232 Shewanella pealeana ATCC 700345 beta-lactamase domain-containing protein YP_001503083.1 3962085 R 398579 CDS YP_001503084.1 157963050 5663622 complement(3963814..3965004) 1 NC_009901.1 KEGG: slo:Shew_2655 hypothetical protein; hypothetical protein 3965004 5663622 Spea_3233 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503084.1 3963814 R 398579 CDS YP_001503085.1 157963051 5663623 3965497..3965745 1 NC_009901.1 KEGG: ppr:PBPRB0452 hypothetical protein; hypothetical protein 3965745 5663623 Spea_3234 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503085.1 3965497 D 398579 CDS YP_001503086.1 157963052 5663624 complement(3965819..3967702) 1 NC_009901.1 PFAM: Curlin associated repeat protein; KEGG: sfr:Sfri_1516 curlin associated repeat protein; curlin-associated protein 3967702 5663624 Spea_3235 Shewanella pealeana ATCC 700345 curlin-associated protein YP_001503086.1 3965819 R 398579 CDS YP_001503087.1 157963053 5663625 3968235..3969122 1 NC_009901.1 PFAM: band 7 protein; KEGG: slo:Shew_0978 band 7 protein; hypothetical protein 3969122 5663625 Spea_3236 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503087.1 3968235 D 398579 CDS YP_001503088.1 157963054 5663626 3969372..3971117 1 NC_009901.1 KEGG: vha:VIBHAR_05537 hypothetical protein; hypothetical protein 3971117 5663626 Spea_3237 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503088.1 3969372 D 398579 CDS YP_001503089.1 157963055 5663627 3971380..3972459 1 NC_009901.1 PFAM: PepSY-associated TM helix domain protein; KEGG: sde:Sde_2820 hypothetical protein; PepSY-associated TM helix domain-containing protein 3972459 5663627 Spea_3238 Shewanella pealeana ATCC 700345 PepSY-associated TM helix domain-containing protein YP_001503089.1 3971380 D 398579 CDS YP_001503090.1 157963056 5663628 3972694..3974772 1 NC_009901.1 PFAM: peptidase M13 neprilysin; peptidase M13; KEGG: sfr:Sfri_1958 endothelin-converting enzyme 1; endothelin-converting protein 1 3974772 5663628 Spea_3239 Shewanella pealeana ATCC 700345 endothelin-converting protein 1 YP_001503090.1 3972694 D 398579 CDS YP_001503091.1 157963057 5663629 3975003..3975860 1 NC_009901.1 YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; putative glutathione S-transferase YghU 3975860 5663629 Spea_3240 Shewanella pealeana ATCC 700345 putative glutathione S-transferase YghU YP_001503091.1 3975003 D 398579 CDS YP_001503092.1 157963058 5663630 complement(3975935..3976420) 1 NC_009901.1 PFAM: protein of unknown function DUF985; KEGG: spc:Sputcn32_3190 protein of unknown function DUF985; hypothetical protein 3976420 5663630 Spea_3241 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503092.1 3975935 R 398579 CDS YP_001503093.1 157963059 5663631 complement(3976644..3976892) 1 NC_009901.1 KEGG: slo:Shew_3030 hypothetical protein; hypothetical protein 3976892 5663631 Spea_3242 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503093.1 3976644 R 398579 CDS YP_001503094.1 157963060 5663632 3977193..3978557 1 NC_009901.1 KEGG: vfi:VFA0969 guanine deaminase; TIGRFAM: Guanine deaminase; PFAM: amidohydrolase; guanine deaminase 3978557 5663632 Spea_3243 Shewanella pealeana ATCC 700345 guanine deaminase YP_001503094.1 3977193 D 398579 CDS YP_001503095.1 157963061 5663633 complement(3978674..3980059) 1 NC_009901.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: aha:AHA_0949 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 3980059 5663633 Spea_3244 Shewanella pealeana ATCC 700345 xanthine/uracil/vitamin C permease YP_001503095.1 3978674 R 398579 CDS YP_001503096.1 157963062 5663634 3980467..3981219 1 NC_009901.1 PFAM: SpoOM family protein; KEGG: pha:PSHAa0857 SpoOM-related protein; SpoOM family protein 3981219 5663634 Spea_3245 Shewanella pealeana ATCC 700345 SpoOM family protein YP_001503096.1 3980467 D 398579 CDS YP_001503097.1 157963063 5663635 complement(3981385..3982539) 1 NC_009901.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rca:Rcas_3855 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 3982539 5663635 Spea_3246 Shewanella pealeana ATCC 700345 mandelate racemase/muconate lactonizing protein YP_001503097.1 3981385 R 398579 CDS YP_001503098.1 157963064 5663636 complement(3982544..3984142) 1 NC_009901.1 PFAM: BCCT transporter; KEGG: oih:OB0704 choline transporter; BCCT transporter 3984142 5663636 Spea_3247 Shewanella pealeana ATCC 700345 BCCT transporter YP_001503098.1 3982544 R 398579 CDS YP_001503099.1 157963065 5663637 complement(3984241..3985596) 1 NC_009901.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: rpa:RPA2340 hypothetical protein; FAD dependent oxidoreductase 3985596 5663637 Spea_3248 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001503099.1 3984241 R 398579 CDS YP_001503100.1 157963066 5663638 3985774..3986421 1 NC_009901.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rru:Rru_A3003 transcriptional regulator, GntR family; GntR family transcriptional regulator 3986421 5663638 Spea_3249 Shewanella pealeana ATCC 700345 GntR family transcriptional regulator YP_001503100.1 3985774 D 398579 CDS YP_001503101.1 157963067 5663639 complement(3986699..3987394) 1 NC_009901.1 KEGG: dme:Dmel_CG2839 CG2839; hypothetical protein 3987394 5663639 Spea_3250 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503101.1 3986699 R 398579 CDS YP_001503102.1 157963068 5663640 3987774..3988997 1 NC_009901.1 PFAM: sodium/glutamate symporter; KEGG: slo:Shew_0103 sodium/glutamate symporter; sodium/glutamate symporter 3988997 5663640 Spea_3251 Shewanella pealeana ATCC 700345 sodium/glutamate symporter YP_001503102.1 3987774 D 398579 CDS YP_001503103.1 157963069 5663641 complement(3989316..3990227) 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: vfi:VFA0117 transporter, drug/metabolite exporter family; hypothetical protein 3990227 5663641 Spea_3252 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503103.1 3989316 R 398579 CDS YP_001503104.1 157963070 5663642 complement(3990520..3992706) 1 NC_009901.1 PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: sbl:Sbal_0643 protein of unknown function DUF181; hypothetical protein 3992706 5663642 Spea_3253 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503104.1 3990520 R 398579 CDS YP_001503105.1 157963071 5663643 complement(3992926..3993156) 1 NC_009901.1 KEGG: sbm:Shew185_3665 hypothetical protein; hypothetical protein 3993156 5663643 Spea_3254 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503105.1 3992926 R 398579 CDS YP_001503106.1 157963072 5663644 complement(3993335..3994522) 1 NC_009901.1 PFAM: Ankyrin; KEGG: tva:TVAG_291510 ankyrin repeat protein, putative Pfam: Ank Clathrin PROSITE: ANK_REPEAT ANK_REP_REGION; ankyrin 3994522 5663644 Spea_3255 Shewanella pealeana ATCC 700345 ankyrin YP_001503106.1 3993335 R 398579 CDS YP_001503107.1 157963073 5663645 complement(3994737..3995138) 1 NC_009901.1 KEGG: spc:Sputcn32_3202 hypothetical protein; hypothetical protein 3995138 5663645 Spea_3256 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503107.1 3994737 R 398579 CDS YP_001503108.1 157963074 5663646 complement(3995265..3996017) 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 3996017 5663646 Spea_3257 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001503108.1 3995265 R 398579 CDS YP_001503109.1 157963075 5663647 complement(3996101..3996499) 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 3996499 5663647 Spea_3258 Shewanella pealeana ATCC 700345 transposase YP_001503109.1 3996101 R 398579 CDS YP_001503110.1 157963076 5663648 complement(3996613..3998196) 1 NC_009901.1 PFAM: Na+/H+ antiporter NhaC; KEGG: asa:ASA_1781 Na+/H+ antiporter; Na+/H+ antiporter NhaC 3998196 5663648 Spea_3259 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001503110.1 3996613 R 398579 CDS YP_001503111.1 157963077 5663649 3998909..3999097 1 NC_009901.1 KEGG: slo:Shew_1222 hypothetical protein; hypothetical protein 3999097 5663649 Spea_3260 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503111.1 3998909 D 398579 CDS YP_001503112.1 157963078 5663650 3999616..3999825 1 NC_009901.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ppr:PBPRB1929 putative Cold shock-like protein; cold-shock DNA-binding domain-containing protein 3999825 5663650 Spea_3261 Shewanella pealeana ATCC 700345 cold-shock DNA-binding domain-containing protein YP_001503112.1 3999616 D 398579 CDS YP_001503113.1 157963079 5663651 4000195..4000404 1 NC_009901.1 KEGG: vfi:VFA1093 hypothetical protein; hypothetical protein 4000404 5663651 Spea_3262 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503113.1 4000195 D 398579 CDS YP_001503114.1 157963080 5663652 complement(4000859..4002826) 1 NC_009901.1 KEGG: slo:Shew_2580 hypothetical protein; hypothetical protein 4002826 5663652 Spea_3263 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503114.1 4000859 R 398579 CDS YP_001503115.1 157963081 5663653 complement(4004145..4005233) 1 NC_009901.1 KEGG: son:SO_2929 hypothetical protein; hypothetical protein 4005233 5663653 Spea_3264 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503115.1 4004145 R 398579 CDS YP_001503116.1 157963082 5664821 complement(4006097..4007728) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: aha:AHA_3197 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 4007728 5664821 Spea_3266 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001503116.1 4006097 R 398579 CDS YP_001503117.1 157963083 5663655 complement(4008015..4009160) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sdn:Sden_0245 GGDEF domain; diguanylate cyclase 4009160 5663655 Spea_3267 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503117.1 4008015 R 398579 CDS YP_001503118.1 157963084 5663656 complement(4009692..4010615) 1 NC_009901.1 KEGG: vfi:VF1097 BAX protein; BAX protein 4010615 5663656 Spea_3268 Shewanella pealeana ATCC 700345 BAX protein YP_001503118.1 4009692 R 398579 CDS YP_001503119.1 157963085 5663657 complement(4010800..4011078) 1 NC_009901.1 KEGG: sdn:Sden_0849 hypothetical protein; hypothetical protein 4011078 5663657 Spea_3269 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503119.1 4010800 R 398579 CDS YP_001503120.1 157963086 5663658 4011330..4011917 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_3270 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4011917 5663658 Spea_3270 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001503120.1 4011330 D 398579 CDS YP_001503121.1 157963087 5663659 4012150..4013388 1 NC_009901.1 KEGG: vvu:VV2_0542 Mn2+ and Fe2+ transporter of the NRAMP family; manganese transporter NRAMP 4013388 5663659 Spea_3271 Shewanella pealeana ATCC 700345 manganese transporter NRAMP YP_001503121.1 4012150 D 398579 CDS YP_001503122.1 157963088 5663660 4013808..4015235 1 NC_009901.1 PFAM: Citrate transporter; KEGG: ppr:PBPRB0793 putative Na+/H+ antiporter; citrate transporter 4015235 5663660 Spea_3272 Shewanella pealeana ATCC 700345 citrate transporter YP_001503122.1 4013808 D 398579 CDS YP_001503123.1 157963089 5663661 complement(4015304..4015570) 1 NC_009901.1 hypothetical protein 4015570 5663661 Spea_3273 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503123.1 4015304 R 398579 CDS YP_001503124.1 157963090 5663662 4015714..4017126 1 NC_009901.1 KEGG: stp:Strop_2134 hypothetical protein; hypothetical protein 4017126 5663662 Spea_3274 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503124.1 4015714 D 398579 CDS YP_001503125.1 157963091 5663663 complement(4017075..4019033) 1 NC_009901.1 PFAM: sulfatase; KEGG: tbd:Tbd_0306 arylsulfatase; sulfatase 4019033 5663663 Spea_3275 Shewanella pealeana ATCC 700345 sulfatase YP_001503125.1 4017075 R 398579 CDS YP_001503126.1 157963092 5663664 complement(4019346..4020491) 1 NC_009901.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vfi:VFA0004 tripeptidase T; peptidase T-like protein 4020491 5663664 Spea_3276 Shewanella pealeana ATCC 700345 peptidase T-like protein YP_001503126.1 4019346 R 398579 CDS YP_001503127.1 157963093 5663665 4020681..4021115 1 NC_009901.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: slo:Shew_3055 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 4021115 5663665 Spea_3277 Shewanella pealeana ATCC 700345 zinc-binding CMP/dCMP deaminase YP_001503127.1 4020681 D 398579 CDS YP_001503128.1 157963094 5663666 4021659..4022090 1 NC_009901.1 hypothetical protein 4022090 5663666 Spea_3278 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503128.1 4021659 D 398579 CDS YP_001503129.1 157963095 5663667 4022170..4022703 1 NC_009901.1 PFAM: cation antiporter; KEGG: sfr:Sfri_2281 cation antiporter; cation antiporter 4022703 5663667 Spea_3279 Shewanella pealeana ATCC 700345 cation antiporter YP_001503129.1 4022170 D 398579 CDS YP_001503130.1 157963096 5663668 4022700..4022999 1 NC_009901.1 PFAM: multiple resistance and pH regulation protein F; KEGG: rru:Rru_A1640 multiple resistance and pH regulation protein F; multiple resistance and pH regulation protein F 4022999 5663668 Spea_3280 Shewanella pealeana ATCC 700345 multiple resistance and pH regulation protein F YP_001503130.1 4022700 D 398579 CDS YP_001503131.1 157963097 5663669 4022996..4023322 1 NC_009901.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: hne:HNE_0731 monovalent cation/proton antiporter, MnhG/PhaG family; monovalent cation/proton antiporter subunit MnhG/PhaG 4023322 5663669 Spea_3281 Shewanella pealeana ATCC 700345 monovalent cation/proton antiporter subunit MnhG/PhaG YP_001503131.1 4022996 D 398579 CDS YP_001503132.1 157963098 5663670 4023415..4024452 1 NC_009901.1 subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; putative monovalent cation/H+ antiporter subunit B 4024452 5663670 Spea_3282 Shewanella pealeana ATCC 700345 putative monovalent cation/H+ antiporter subunit B YP_001503132.1 4023415 D 398579 CDS YP_001503133.1 157963099 5663671 4024452..4024814 1 NC_009901.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: pla:Plav_2968 NADH-ubiquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L 4024814 5663671 Spea_3283 Shewanella pealeana ATCC 700345 NADH-ubiquinone oxidoreductase chain 4L YP_001503133.1 4024452 D 398579 CDS YP_001503134.1 157963100 5663672 4024814..4026292 1 NC_009901.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; putative monovalent cation/H+ antiporter subunit D 4026292 5663672 Spea_3284 Shewanella pealeana ATCC 700345 putative monovalent cation/H+ antiporter subunit D YP_001503134.1 4024814 D 398579 CDS YP_001503135.1 157963101 5663673 4026289..4027779 1 NC_009901.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: pla:Plav_2966 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) 4027779 5663673 Spea_3285 Shewanella pealeana ATCC 700345 NADH dehydrogenase (quinone) YP_001503135.1 4026289 D 398579 CDS YP_001503136.1 157963102 5663674 4027769..4028188 1 NC_009901.1 KEGG: smd:Smed_3627 hypothetical protein; hypothetical protein 4028188 5663674 Spea_3286 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503136.1 4027769 D 398579 CDS YP_001503137.1 157963103 5663675 4028175..4029875 1 NC_009901.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; in S. meliloti it is known to be involved specifically with K+ transport; putative monovalent cation/H+ antiporter subunit D 4029875 5663675 Spea_3287 Shewanella pealeana ATCC 700345 putative monovalent cation/H+ antiporter subunit D YP_001503137.1 4028175 D 398579 CDS YP_001503138.1 157963104 5663676 4030159..4031469 1 NC_009901.1 KEGG: bcz:BCZK0821 hypothetical protein; hypothetical protein 4031469 5663676 Spea_3288 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503138.1 4030159 D 398579 CDS YP_001503139.1 157963105 5663677 complement(4032075..4032794) 1 NC_009901.1 hypothetical protein 4032794 5663677 Spea_3289 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503139.1 4032075 R 398579 CDS YP_001503140.1 157963106 5663678 complement(4032794..4033429) 1 NC_009901.1 hypothetical protein 4033429 5663678 Spea_3290 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503140.1 4032794 R 398579 CDS YP_001503141.1 157963107 5663679 4033597..4034154 1 NC_009901.1 KEGG: vpa:VP1418 hypothetical protein; hypothetical protein 4034154 5663679 Spea_3291 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503141.1 4033597 D 398579 CDS YP_001503142.1 157963108 5663680 4034230..4034568 1 NC_009901.1 hypothetical protein 4034568 5663680 Spea_3292 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503142.1 4034230 D 398579 CDS YP_001503143.1 157963109 5663681 complement(4034878..4035372) 1 NC_009901.1 hypothetical protein 4035372 5663681 Spea_3293 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503143.1 4034878 R 398579 CDS YP_001503144.1 157963110 5663682 4035688..4036263 1 NC_009901.1 KEGG: cps:CPS_0790 hypothetical protein; hypothetical protein 4036263 5663682 Spea_3294 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503144.1 4035688 D 398579 CDS YP_001503145.1 157963111 5663683 4036322..4037014 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: mfa:Mfla_0477 protein of unknown function DUF1568; hypothetical protein 4037014 5663683 Spea_3295 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503145.1 4036322 D 398579 CDS YP_001503146.1 157963112 5663684 complement(4037281..4037850) 1 NC_009901.1 hypothetical protein 4037850 5663684 Spea_3296 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503146.1 4037281 R 398579 CDS YP_001503147.1 157963113 5663685 complement(4038030..4038560) 1 NC_009901.1 hypothetical protein 4038560 5663685 Spea_3297 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503147.1 4038030 R 398579 CDS YP_001503148.1 157963114 5663686 complement(4038644..4040521) 1 NC_009901.1 KEGG: shm:Shewmr7_0430 NTPase (NACHT family)-like protein; NACHT family-like NTPase 4040521 5663686 Spea_3298 Shewanella pealeana ATCC 700345 NACHT family-like NTPase YP_001503148.1 4038644 R 398579 CDS YP_001503149.1 157963115 5663687 4040831..4041472 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: shm:Shewmr7_1178 protein of unknown function DUF1568; hypothetical protein 4041472 5663687 Spea_3299 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503149.1 4040831 D 398579 CDS YP_001503150.1 157963116 5663688 complement(4041469..4041918) 1 NC_009901.1 KEGG: slo:Shew_3059 hypothetical protein; hypothetical protein 4041918 5663688 Spea_3300 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503150.1 4041469 R 398579 CDS YP_001503151.1 157963117 5663689 complement(4042194..4045082) 1 NC_009901.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 4045082 5663689 Spea_3301 Shewanella pealeana ATCC 700345 glycine dehydrogenase YP_001503151.1 4042194 R 398579 CDS YP_001503152.1 157963118 5663690 complement(4045342..4045731) 1 NC_009901.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 4045731 5663690 Spea_3302 Shewanella pealeana ATCC 700345 glycine cleavage system protein H YP_001503152.1 4045342 R 398579 CDS YP_001503153.1 157963119 5663691 complement(4046160..4047254) 1 NC_009901.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 4047254 gcvT 5663691 gcvT Shewanella pealeana ATCC 700345 glycine cleavage system aminomethyltransferase T YP_001503153.1 4046160 R 398579 CDS YP_001503154.1 157963120 5663692 complement(4047593..4048813) 1 NC_009901.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: slo:Shew_3065 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 4048813 5663692 Spea_3304 Shewanella pealeana ATCC 700345 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001503154.1 4047593 R 398579 CDS YP_001503155.1 157963121 5663693 complement(4048910..4050190) 1 NC_009901.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase FAD-binding; KEGG: slo:Shew_3066 2-polyprenyl-6-methoxyphenol 4-hydroxylase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase 4050190 5663693 Spea_3305 Shewanella pealeana ATCC 700345 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_001503155.1 4048910 R 398579 CDS YP_001503156.1 157963122 5663694 complement(4050287..4050862) 1 NC_009901.1 TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: shw:Sputw3181_0727 YecA family protein; yecA family protein 4050862 5663694 Spea_3306 Shewanella pealeana ATCC 700345 yecA family protein YP_001503156.1 4050287 R 398579 CDS YP_001503157.1 157963123 5663695 complement(4050895..4051140) 1 NC_009901.1 hypothetical protein 4051140 5663695 Spea_3307 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503157.1 4050895 R 398579 CDS YP_001503158.1 157963124 5663696 4051244..4051564 1 NC_009901.1 PFAM: protein of unknown function DUF710; KEGG: slo:Shew_3068 protein of unknown function DUF710; hypothetical protein 4051564 5663696 Spea_3308 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503158.1 4051244 D 398579 CDS YP_001503159.1 157963125 5663697 complement(4052297..4053148) 1 NC_009901.1 KEGG: ckl:CKL_1941 hypothetical protein; hypothetical protein 4053148 5663697 Spea_3309 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503159.1 4052297 R 398579 CDS YP_001503160.1 157963126 5663698 complement(4053181..4053567) 1 NC_009901.1 hypothetical protein 4053567 5663698 Spea_3310 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503160.1 4053181 R 398579 CDS YP_001503161.1 157963127 5663699 4053775..4054404 1 NC_009901.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: slo:Shew_3069 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 4054404 5663699 Spea_3311 Shewanella pealeana ATCC 700345 5-formyltetrahydrofolate cyclo-ligase YP_001503161.1 4053775 D 398579 CDS YP_001503162.1 157963128 5663700 4054610..4055230 1 NC_009901.1 PFAM: protein of unknown function DUF1326; KEGG: cps:CPS_2422 hypothetical protein; hypothetical protein 4055230 5663700 Spea_3312 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503162.1 4054610 D 398579 CDS YP_001503163.1 157963129 5663701 4055275..4056012 1 NC_009901.1 KEGG: cps:CPS_2421 hypothetical protein; hypothetical protein 4056012 5663701 Spea_3313 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503163.1 4055275 D 398579 CDS YP_001503164.1 157963130 5663702 complement(4056093..4056761) 1 NC_009901.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 4056761 5663702 Spea_3314 Shewanella pealeana ATCC 700345 uracil-DNA glycosylase YP_001503164.1 4056093 R 398579 CDS YP_001503165.1 157963131 5663703 4057017..4057574 1 NC_009901.1 KEGG: slo:Shew_3074 pilin, putative; pilin 4057574 5663703 Spea_3315 Shewanella pealeana ATCC 700345 pilin YP_001503165.1 4057017 D 398579 CDS YP_001503166.1 157963132 5663704 4057654..4058187 1 NC_009901.1 KEGG: sfr:Sfri_3092 methylation site containing protein; methylation site containing protein 4058187 5663704 Spea_3316 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001503166.1 4057654 D 398579 CDS YP_001503167.1 157963133 5663705 4058262..4058582 1 NC_009901.1 KEGG: slo:Shew_3075 hypothetical protein; hypothetical protein 4058582 5663705 Spea_3317 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503167.1 4058262 D 398579 CDS YP_001503168.1 157963134 5663706 complement(4058662..4059276) 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: slo:Shew_3076 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 4059276 5663706 Spea_3318 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001503168.1 4058662 R 398579 CDS YP_001503169.1 157963135 5663707 4059695..4060237 1 NC_009901.1 KEGG: sbl:Sbal_0960 thiol:disulfide interchange protein, putative; thiol:disulfide interchange protein 4060237 5663707 Spea_3319 Shewanella pealeana ATCC 700345 thiol:disulfide interchange protein YP_001503169.1 4059695 D 398579 CDS YP_001503170.1 157963136 5663708 4060373..4061827 1 NC_009901.1 KEGG: she:Shewmr4_0887 transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; Fis family transcriptional regulator 4061827 5663708 Spea_3320 Shewanella pealeana ATCC 700345 Fis family transcriptional regulator YP_001503170.1 4060373 D 398579 CDS YP_001503171.1 157963137 5663709 4062138..4063604 1 NC_009901.1 TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sbl:Sbal_0957 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase cbb3 type accessory protein FixG 4063604 5663709 Spea_3321 Shewanella pealeana ATCC 700345 cytochrome c oxidase cbb3 type accessory protein FixG YP_001503171.1 4062138 D 398579 CDS YP_001503172.1 157963138 5663710 4064078..4065676 1 NC_009901.1 PFAM: AMP-dependent synthetase and ligase; KEGG: she:Shewmr4_0883 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4065676 5663710 Spea_3322 Shewanella pealeana ATCC 700345 AMP-dependent synthetase and ligase YP_001503172.1 4064078 D 398579 CDS YP_001503173.1 157963139 5663711 complement(4065793..4066161) 1 NC_009901.1 hypothetical protein 4066161 5663711 Spea_3323 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503173.1 4065793 R 398579 CDS YP_001503174.1 157963140 5663712 complement(4066318..4068360) 1 NC_009901.1 KEGG: slo:Shew_3087 lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 4068360 5663712 Spea_3324 Shewanella pealeana ATCC 700345 lipid ABC transporter ATPase/inner membrane protein YP_001503174.1 4066318 R 398579 CDS YP_001503175.1 157963141 5663713 complement(4068513..4069082) 1 NC_009901.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: shw:Sputw3181_3199 pyridoxamine 5'-phosphate oxidase-related, FMN-binding; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 4069082 5663713 Spea_3325 Shewanella pealeana ATCC 700345 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001503175.1 4068513 R 398579 CDS YP_001503176.1 157963142 5663714 complement(4069120..4069644) 1 NC_009901.1 PFAM: protein of unknown function DUF1008; KEGG: spc:Sputcn32_0967 protein of unknown function DUF1008; hypothetical protein 4069644 5663714 Spea_3326 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503176.1 4069120 R 398579 CDS YP_001503177.1 157963143 5663715 complement(4069772..4071838) 1 NC_009901.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shw:Sputw3181_3201 TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent heme/hemoglobin receptor family protein 4071838 5663715 Spea_3327 Shewanella pealeana ATCC 700345 TonB-dependent heme/hemoglobin receptor family protein YP_001503177.1 4069772 R 398579 CDS YP_001503178.1 157963144 5663716 4072167..4072925 1 NC_009901.1 TIGRFAM: TonB family protein; KEGG: sbm:Shew185_1020 TonB family protein; TonB family protein 4072925 5663716 Spea_3328 Shewanella pealeana ATCC 700345 TonB family protein YP_001503178.1 4072167 D 398579 CDS YP_001503179.1 157963145 5663717 4073100..4073876 1 NC_009901.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sbm:Shew185_1019 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 4073876 5663717 Spea_3329 Shewanella pealeana ATCC 700345 MotA/TolQ/ExbB proton channel YP_001503179.1 4073100 D 398579 CDS YP_001503180.1 157963146 5663718 4073873..4074286 1 NC_009901.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: sbl:Sbal_0949 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 4074286 5663718 Spea_3330 Shewanella pealeana ATCC 700345 biopolymer transport protein ExbD/TolR YP_001503180.1 4073873 D 398579 CDS YP_001503181.1 157963147 5663719 4074481..4075419 1 NC_009901.1 PFAM: periplasmic binding protein; KEGG: sbm:Shew185_1017 periplasmic binding protein; periplasmic-binding protein 4075419 5663719 Spea_3331 Shewanella pealeana ATCC 700345 periplasmic-binding protein YP_001503181.1 4074481 D 398579 CDS YP_001503182.1 157963148 5663720 4075478..4076494 1 NC_009901.1 PFAM: transport system permease protein; KEGG: sbm:Shew185_1016 transport system permease protein; transport system permease 4076494 5663720 Spea_3332 Shewanella pealeana ATCC 700345 transport system permease YP_001503182.1 4075478 D 398579 CDS YP_001503183.1 157963149 5663721 4076508..4077314 1 NC_009901.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 4077314 hmuV 5663721 hmuV Shewanella pealeana ATCC 700345 hemin importer ATP-binding subunit YP_001503183.1 4076508 D 398579 CDS YP_001503184.1 157963150 5663722 complement(4077402..4077959) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: vfi:VF1676 hypothetical protein; TetR family transcriptional regulator 4077959 5663722 Spea_3334 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001503184.1 4077402 R 398579 CDS YP_001503185.1 157963151 5663723 4078095..4078628 1 NC_009901.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: vvu:VV2_1034 dihydrofolate reductase; deaminase-reductase domain-containing protein 4078628 5663723 Spea_3335 Shewanella pealeana ATCC 700345 deaminase-reductase domain-containing protein YP_001503185.1 4078095 D 398579 CDS YP_001503186.1 157963152 5663724 4078765..4079262 1 NC_009901.1 PFAM: protein of unknown function DUF218; KEGG: bpe:BP2323 hypothetical protein; hypothetical protein 4079262 5663724 Spea_3336 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503186.1 4078765 D 398579 CDS YP_001503187.1 157963153 5663725 complement(4079315..4080220) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pha:PSHAb0015 putative transcriptional regulatory protein (LysR family); LysR family transcriptional regulator 4080220 5663725 Spea_3337 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503187.1 4079315 R 398579 CDS YP_001503188.1 157963154 5663726 4080372..4080797 1 NC_009901.1 PFAM: transmembrane pair domain protein; KEGG: vfi:VFA1143 hypothetical membrane spanning protein; transmembrane pair domain-containing protein 4080797 5663726 Spea_3338 Shewanella pealeana ATCC 700345 transmembrane pair domain-containing protein YP_001503188.1 4080372 D 398579 CDS YP_001503189.1 157963155 5663727 4081047..4082486 1 NC_009901.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4082486 5663727 Spea_3339 Shewanella pealeana ATCC 700345 coproporphyrinogen III oxidase YP_001503189.1 4081047 D 398579 CDS YP_001503190.1 157963156 5663728 4082569..4082958 1 NC_009901.1 KEGG: vha:VIBHAR_03179 hypothetical protein; hypothetical protein 4082958 5663728 Spea_3340 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503190.1 4082569 D 398579 CDS YP_001503191.1 157963157 5663729 4083261..4083431 1 NC_009901.1 PFAM: periplasmic nitrate reductase NapE; KEGG: sbl:Sbal_3211 periplasmic nitrate reductase NapE; periplasmic nitrate reductase NapE 4083431 5663729 Spea_3341 Shewanella pealeana ATCC 700345 periplasmic nitrate reductase NapE YP_001503191.1 4083261 D 398579 CDS YP_001503192.1 157963158 5663730 4083472..4084650 1 NC_009901.1 TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; KEGG: son:SO_1233 tetraheme cytochrome c; trimethylamine-N-oxide reductase c-type cytochrome TorC 4084650 5663730 Spea_3342 Shewanella pealeana ATCC 700345 trimethylamine-N-oxide reductase c-type cytochrome TorC YP_001503192.1 4083472 D 398579 CDS YP_001503193.1 157963159 5663731 4084665..4087157 1 NC_009901.1 TIGRFAM: trimethylamine-N-oxide reductase TorA; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sfr:Sfri_1994 trimethylamine-N-oxide reductase TorA; trimethylamine-N-oxide reductase TorA 4087157 5663731 Spea_3343 Shewanella pealeana ATCC 700345 trimethylamine-N-oxide reductase TorA YP_001503193.1 4084665 D 398579 CDS YP_001503194.1 157963160 5663732 4087154..4087819 1 NC_009901.1 TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; chaperone protein TorD 4087819 torD 5663732 torD Shewanella pealeana ATCC 700345 chaperone protein TorD YP_001503194.1 4087154 D 398579 CDS YP_001503195.1 157963161 5663733 complement(4087918..4091034) 1 NC_009901.1 TIGRFAM: TMAO reductase sytem sensor TorS; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: sfr:Sfri_1992 multi-sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 4091034 5663733 Spea_3345 Shewanella pealeana ATCC 700345 Hpt sensor hybrid histidine kinase YP_001503195.1 4087918 R 398579 CDS YP_001503196.1 157963162 5663734 4091116..4092180 1 NC_009901.1 periplasmic sensory protein associated with the TorRS two-component regulatory system; TMAO reductase system periplasmic protein TorT 4092180 5663734 Spea_3346 Shewanella pealeana ATCC 700345 TMAO reductase system periplasmic protein TorT YP_001503196.1 4091116 D 398579 CDS YP_001503197.1 157963163 5663735 complement(4092267..4092977) 1 NC_009901.1 response regulator in two-component regulatory system with TorS; involved in regulation of trimethylamine N-oxide reductase genes; DNA-binding transcriptional regulator TorR 4092977 5663735 Spea_3347 Shewanella pealeana ATCC 700345 DNA-binding transcriptional regulator TorR YP_001503197.1 4092267 R 398579 CDS YP_001503198.1 157963164 5663736 complement(4093171..4093908) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0030 hypothetical protein; hypothetical protein 4093908 5663736 Spea_3348 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503198.1 4093171 R 398579 CDS YP_001503199.1 157963165 5663737 complement(4094050..4094874) 1 NC_009901.1 PFAM: Ion transport protein; KEGG: pha:PSHAb0529 putative cation transporter component; Ion transport protein 4094874 5663737 Spea_3349 Shewanella pealeana ATCC 700345 Ion transport protein YP_001503199.1 4094050 R 398579 CDS YP_001503200.1 157963166 5663738 complement(4095283..4095579) 1 NC_009901.1 KEGG: shw:Sputw3181_0969 hypothetical protein; hypothetical protein 4095579 5663738 Spea_3350 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503200.1 4095283 R 398579 CDS YP_001503201.1 157963167 5663739 4095763..4096413 1 NC_009901.1 PFAM: membrane-flanked domain; KEGG: slo:Shew_3091 membrane-flanked domain protein; membrane-flanked domain-containing protein 4096413 5663739 Spea_3351 Shewanella pealeana ATCC 700345 membrane-flanked domain-containing protein YP_001503201.1 4095763 D 398579 CDS YP_001503202.1 157963168 5663740 4096403..4097917 1 NC_009901.1 PFAM: membrane-flanked domain; KEGG: slo:Shew_3092 membrane-flanked domain protein; membrane-flanked domain-containing protein 4097917 5663740 Spea_3352 Shewanella pealeana ATCC 700345 membrane-flanked domain-containing protein YP_001503202.1 4096403 D 398579 CDS YP_001503203.1 157963169 5663741 4097920..4098498 1 NC_009901.1 PFAM: protein of unknown function DUF924; KEGG: sbl:Sbal_3327 protein of unknown function DUF924; hypothetical protein 4098498 5663741 Spea_3353 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503203.1 4097920 D 398579 CDS YP_001503204.1 157963170 5663742 complement(4098674..4099117) 1 NC_009901.1 PFAM: UspA domain protein; KEGG: slo:Shew_3100 UspA domain protein; UspA domain-containing protein 4099117 5663742 Spea_3354 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001503204.1 4098674 R 398579 CDS YP_001503205.1 157963171 5663743 complement(4099203..4099634) 1 NC_009901.1 PFAM: UspA domain protein; KEGG: slo:Shew_3101 UspA domain protein; UspA domain-containing protein 4099634 5663743 Spea_3355 Shewanella pealeana ATCC 700345 UspA domain-containing protein YP_001503205.1 4099203 R 398579 CDS YP_001503206.1 157963172 5663744 complement(4099763..4100143) 1 NC_009901.1 KEGG: slo:Shew_3102 hypothetical protein; hypothetical protein 4100143 5663744 Spea_3356 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503206.1 4099763 R 398579 CDS YP_001503207.1 157963173 5663745 4100337..4101764 1 NC_009901.1 PFAM: aldehyde dehydrogenase; KEGG: sbl:Sbal_3332 aldehyde dehydrogenase; aldehyde dehydrogenase 4101764 5663745 Spea_3357 Shewanella pealeana ATCC 700345 aldehyde dehydrogenase YP_001503207.1 4100337 D 398579 CDS YP_001503208.1 157963174 5663746 4101787..4102359 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_3104 transcriptional regulator, TetR family; TetR family transcriptional regulator 4102359 5663746 Spea_3358 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001503208.1 4101787 D 398579 CDS YP_001503209.1 157963175 5664822 complement(4102730..4104094) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: slo:Shew_0727 integral membrane sensor signal transduction histidine kinase; PAS/PAC sensor signal transduction histidine kinase 4104094 5664822 Spea_3360 Shewanella pealeana ATCC 700345 PAS/PAC sensor signal transduction histidine kinase YP_001503209.1 4102730 R 398579 CDS YP_001503210.1 157963176 5663748 complement(4104098..4105627) 1 NC_009901.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: slo:Shew_0726 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma54 specific transcriptional regulator 4105627 5663748 Spea_3361 Shewanella pealeana ATCC 700345 Fis family two component sigma54 specific transcriptional regulator YP_001503210.1 4104098 R 398579 CDS YP_001503211.1 157963177 5663749 complement(4105762..4106973) 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: shm:Shewmr7_3157 protein of unknown function DUF214; hypothetical protein 4106973 5663749 Spea_3362 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503211.1 4105762 R 398579 CDS YP_001503212.1 157963178 5663750 complement(4107001..4108302) 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: shm:Shewmr7_3158 protein of unknown function DUF214; hypothetical protein 4108302 5663750 Spea_3363 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503212.1 4107001 R 398579 CDS YP_001503213.1 157963179 5663751 complement(4108324..4109055) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sbm:Shew185_0998 ABC transporter related; ABC transporter-like protein 4109055 5663751 Spea_3364 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503213.1 4108324 R 398579 CDS YP_001503214.1 157963180 5663752 complement(4109473..4110735) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: slo:Shew_0721 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4110735 5663752 Spea_3365 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001503214.1 4109473 R 398579 CDS YP_001503215.1 157963181 5663753 4111275..4112432 1 NC_009901.1 PFAM: porin Gram-negative type; KEGG: slo:Shew_2283 porin, gram-negative type; porin 4112432 5663753 Spea_3366 Shewanella pealeana ATCC 700345 porin YP_001503215.1 4111275 D 398579 CDS YP_001503216.1 157963182 5663754 complement(4112640..4114166) 1 NC_009901.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: slo:Shew_2282 transcriptional regulator, fis family; response regulator receiver protein 4114166 5663754 Spea_3367 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001503216.1 4112640 R 398579 CDS YP_001503217.1 157963183 5663755 4115174..4116733 1 NC_009901.1 KEGG: slo:Shew_2281 flavocytochrome c; TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; flavocytochrome c 4116733 5663755 Spea_3368 Shewanella pealeana ATCC 700345 flavocytochrome c YP_001503217.1 4115174 D 398579 CDS YP_001503218.1 157963184 5663756 4116764..4118449 1 NC_009901.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: slo:Shew_2280 phenylalanine/histidine ammonia-lyase; phenylalanine/histidine ammonia-lyase 4118449 5663756 Spea_3369 Shewanella pealeana ATCC 700345 phenylalanine/histidine ammonia-lyase YP_001503218.1 4116764 D 398579 CDS YP_001503219.1 157963185 5663757 4118643..4119023 1 NC_009901.1 KEGG: slo:Shew_2279 tetraheme cytochrome c; tetraheme cytochrome c 4119023 5663757 Spea_3370 Shewanella pealeana ATCC 700345 tetraheme cytochrome c YP_001503219.1 4118643 D 398579 CDS YP_001503220.1 157963186 5663758 complement(4119421..4119804) 1 NC_009901.1 KEGG: shn:Shewana3_3269 hypothetical protein; hypothetical protein 4119804 5663758 Spea_3371 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503220.1 4119421 R 398579 CDS YP_001503221.1 157963187 5663759 complement(4120060..4120617) 1 NC_009901.1 KEGG: ppr:PBPRB0735 hypothetical protein; hypothetical protein 4120617 5663759 Spea_3372 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503221.1 4120060 R 398579 CDS YP_001503222.1 157963188 5663760 4120838..4121347 1 NC_009901.1 KEGG: mma:MM_0051 hypothetical protein; hypothetical protein 4121347 5663760 Spea_3373 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503222.1 4120838 D 398579 CDS YP_001503223.1 157963189 5663761 complement(4121391..4122227) 1 NC_009901.1 PFAM: periplasmic binding protein; KEGG: shn:Shewana3_3272 periplasmic binding protein; periplasmic-binding protein 4122227 5663761 Spea_3374 Shewanella pealeana ATCC 700345 periplasmic-binding protein YP_001503223.1 4121391 R 398579 CDS YP_001503224.1 157963190 5663762 complement(4123161..4123682) 1 NC_009901.1 hypothetical protein 4123682 5663762 Spea_3375 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503224.1 4123161 R 398579 CDS YP_001503225.1 157963191 5663763 complement(4123998..4124615) 1 NC_009901.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 4124615 5663763 Spea_3376 Shewanella pealeana ATCC 700345 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_001503225.1 4123998 R 398579 CDS YP_001503226.1 157963192 5663764 complement(4124766..4126376) 1 NC_009901.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 4126376 5663764 Spea_3377 Shewanella pealeana ATCC 700345 cobyric acid synthase YP_001503226.1 4124766 R 398579 CDS YP_001503227.1 157963193 5663765 complement(4126388..4126936) 1 NC_009901.1 PFAM: cobalbumin biosynthesis protein; KEGG: shn:Shewana3_3276 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 4126936 5663765 Spea_3378 Shewanella pealeana ATCC 700345 cobalbumin biosynthesis protein YP_001503227.1 4126388 R 398579 CDS YP_001503228.1 157963194 5663766 complement(4126933..4127712) 1 NC_009901.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: son:SO_1036 cobalamin 5'-phosphate synthase; cobalamin 5'-phosphate synthase 4127712 5663766 Spea_3379 Shewanella pealeana ATCC 700345 cobalamin 5'-phosphate synthase YP_001503228.1 4126933 R 398579 CDS YP_001503229.1 157963195 5663767 complement(4128090..4129121) 1 NC_009901.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 4129121 cobT 5663767 cobT Shewanella pealeana ATCC 700345 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001503229.1 4128090 R 398579 CDS YP_001503230.1 157963196 5663768 complement(4129167..4130222) 1 NC_009901.1 PFAM: transport system permease protein; KEGG: slo:Shew_0713 transport system permease protein; transport system permease 4130222 5663768 Spea_3381 Shewanella pealeana ATCC 700345 transport system permease YP_001503230.1 4129167 R 398579 CDS YP_001503231.1 157963197 5663769 complement(4130215..4131141) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_0712 ABC transporter-related protein; ABC transporter-like protein 4131141 5663769 Spea_3382 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503231.1 4130215 R 398579 CDS YP_001503232.1 157963198 5663770 complement(4131919..4132533) 1 NC_009901.1 PFAM: Phosphoglycerate mutase; KEGG: slo:Shew_0711 phosphoglycerate mutase; phosphoglycerate mutase 4132533 5663770 Spea_3383 Shewanella pealeana ATCC 700345 phosphoglycerate mutase YP_001503232.1 4131919 R 398579 CDS YP_001503233.1 157963199 5663771 4132917..4136549 1 NC_009901.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4136549 metH 5663771 metH Shewanella pealeana ATCC 700345 B12-dependent methionine synthase YP_001503233.1 4132917 D 398579 CDS YP_001503234.1 157963200 5663772 complement(4136672..4139404) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: saz:Sama_1252 TonB-dependent receptor; TonB-dependent receptor 4139404 5663772 Spea_3385 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001503234.1 4136672 R 398579 CDS YP_001503235.1 157963201 5663773 complement(4139622..4140368) 1 NC_009901.1 hypothetical protein 4140368 5663773 Spea_3386 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503235.1 4139622 R 398579 CDS YP_001503236.1 157963202 5663774 complement(4140714..4141322) 1 NC_009901.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 4141322 5663774 Spea_3387 Shewanella pealeana ATCC 700345 glutathione-dependent formaldehyde-activating protein YP_001503236.1 4140714 R 398579 CDS YP_001503237.1 157963203 5663775 complement(4141616..4142674) 1 NC_009901.1 KEGG: gfo:GFO_0080 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4142674 5663775 Spea_3388 Shewanella pealeana ATCC 700345 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001503237.1 4141616 R 398579 CDS YP_001503238.1 157963204 5663776 4142944..4143585 1 NC_009901.1 hypothetical protein 4143585 5663776 Spea_3389 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503238.1 4142944 D 398579 CDS YP_001503239.1 157963205 5663777 4143630..4146215 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: vvu:VV1_0007 small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 4146215 5663777 Spea_3390 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001503239.1 4143630 D 398579 CDS YP_001503240.1 157963206 5663778 4146436..4146708 1 NC_009901.1 KEGG: sdn:Sden_0577 hypothetical protein; hypothetical protein 4146708 5663778 Spea_3391 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503240.1 4146436 D 398579 CDS YP_001503241.1 157963207 5663779 4147086..4148081 1 NC_009901.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 4148081 5663779 Spea_3392 Shewanella pealeana ATCC 700345 adenosine deaminase YP_001503241.1 4147086 D 398579 CDS YP_001503242.1 157963208 5663780 4148597..4148938 1 NC_009901.1 PFAM: TM2 domain containing protein?; KEGG: ppd:Ppro_2995 TM2 domain containing protein+B7201; TM2 domain-containing protein 4148938 5663780 Spea_3393 Shewanella pealeana ATCC 700345 TM2 domain-containing protein YP_001503242.1 4148597 D 398579 CDS YP_001503243.1 157963209 5663781 complement(4149053..4150357) 1 NC_009901.1 KEGG: shn:Shewana3_0174 hypothetical protein; hypothetical protein 4150357 5663781 Spea_3394 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503243.1 4149053 R 398579 CDS YP_001503244.1 157963210 5663782 complement(4150415..4151089) 1 NC_009901.1 PFAM: RDD domain containing protein; KEGG: shm:Shewmr7_2450 RDD domain containing protein; RDD domain-containing protein 4151089 5663782 Spea_3395 Shewanella pealeana ATCC 700345 RDD domain-containing protein YP_001503244.1 4150415 R 398579 CDS YP_001503245.1 157963211 5664823 4151994..4152731 1 NC_009901.1 PFAM: extracellular solute-binding protein family 3; KEGG: son:SO_1044 amino acid ABC transporter, periplasmic amino acid-binding protein; extracellular solute-binding protein 4152731 5664823 Spea_3397 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001503245.1 4151994 D 398579 CDS YP_001503246.1 157963212 5663784 4152739..4153419 1 NC_009901.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_3165 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 4153419 5663784 Spea_3398 Shewanella pealeana ATCC 700345 polar amino acid ABC transporter inner membrane subunit YP_001503246.1 4152739 D 398579 CDS YP_001503247.1 157963213 5663785 4153412..4154137 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_3164 ABC transporter-related protein; ABC transporter-like protein 4154137 5663785 Spea_3399 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503247.1 4153412 D 398579 CDS YP_001503248.1 157963214 5663786 complement(4154263..4155177) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: csa:Csal_1337 transcriptional regulator, LysR family; LysR family transcriptional regulator 4155177 5663786 Spea_3400 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503248.1 4154263 R 398579 CDS YP_001503249.1 157963215 5663787 4155333..4156553 1 NC_009901.1 PFAM: S-adenosyl-L-homocysteine hydrolase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein; Acetohydroxy acid isomeroreductase catalytic domain protein; S-adenosyl-L-homocysteine hydrolase, NAD binding; KEGG: mja:MJ1388 S-adenosyl-L-homocysteine hydrolase; adenosylhomocysteinase 4156553 5663787 Spea_3401 Shewanella pealeana ATCC 700345 adenosylhomocysteinase YP_001503249.1 4155333 D 398579 CDS YP_001503250.1 157963216 5663788 4156683..4157162 1 NC_009901.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: slo:Shew_0707 YbaK/prolyl-tRNA synthetase associated region; YbaK/prolyl-tRNA synthetase associated domain-containing protein 4157162 5663788 Spea_3402 Shewanella pealeana ATCC 700345 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_001503250.1 4156683 D 398579 CDS YP_001503251.1 157963217 5663789 4157423..4157941 1 NC_009901.1 KEGG: shw:Sputw3181_2912 hypothetical protein; hypothetical protein 4157941 5663789 Spea_3403 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503251.1 4157423 D 398579 CDS YP_001503252.1 157963218 5663790 4158264..4158839 1 NC_009901.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: son:SO_4295 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 4158839 5663790 Spea_3404 Shewanella pealeana ATCC 700345 NAD(P)H dehydrogenase (quinone) YP_001503252.1 4158264 D 398579 CDS YP_001503253.1 157963219 5663791 4158870..4160117 1 NC_009901.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: son:SO_4296 NupC family protein; Na+ dependent nucleoside transporter 4160117 5663791 Spea_3405 Shewanella pealeana ATCC 700345 Na+ dependent nucleoside transporter YP_001503253.1 4158870 D 398579 CDS YP_001503254.1 157963220 5663792 4160440..4161102 1 NC_009901.1 KEGG: ppr:PBPRB0398 hypothetical protein; putative periplasmic ligand-binding sensor protein 4161102 5663792 Spea_3406 Shewanella pealeana ATCC 700345 putative periplasmic ligand-binding sensor protein YP_001503254.1 4160440 D 398579 CDS YP_001503255.1 157963221 5663793 4161475..4163517 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: slo:Shew_0490 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 4163517 5663793 Spea_3407 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001503255.1 4161475 D 398579 CDS YP_001503256.1 157963222 5663794 complement(4163596..4163961) 1 NC_009901.1 PFAM: protein of unknown function DUF805; KEGG: cte:CT1580 aminopeptidase C, putative; hypothetical protein 4163961 5663794 Spea_3408 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503256.1 4163596 R 398579 CDS YP_001503257.1 157963223 5663795 4164434..4168030 1 NC_009901.1 hypothetical protein 4168030 5663795 Spea_3409 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503257.1 4164434 D 398579 CDS YP_001503258.1 157963224 5663796 complement(4168141..4169985) 1 NC_009901.1 KEGG: fnu:FN2119 hypothetical exported 24-amino acid repeat protein; hypothetical protein 4169985 5663796 Spea_3410 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503258.1 4168141 R 398579 CDS YP_001503259.1 157963225 5663797 complement(4170443..4171519) 1 NC_009901.1 PFAM: Choloylglycine hydrolase; KEGG: sdn:Sden_0442 choloylglycine hydrolase; choloylglycine hydrolase 4171519 5663797 Spea_3411 Shewanella pealeana ATCC 700345 choloylglycine hydrolase YP_001503259.1 4170443 R 398579 CDS YP_001503260.1 157963226 5663798 4171620..4172660 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sdn:Sden_0443 GGDEF domain; diguanylate cyclase 4172660 5663798 Spea_3412 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503260.1 4171620 D 398579 CDS YP_001503261.1 157963227 5663799 4172886..4173182 1 NC_009901.1 KEGG: sbm:Shew185_3407 hypothetical protein; hypothetical protein 4173182 5663799 Spea_3413 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503261.1 4172886 D 398579 CDS YP_001503262.1 157963228 5663800 complement(4173340..4174641) 1 NC_009901.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slo:Shew_2195 NADH dehydrogenase; NADH dehydrogenase 4174641 5663800 Spea_3414 Shewanella pealeana ATCC 700345 NADH dehydrogenase YP_001503262.1 4173340 R 398579 CDS YP_001503263.1 157963229 5663801 4175059..4175442 1 NC_009901.1 KEGG: vha:VIBHAR_04801 hypothetical protein; hypothetical protein 4175442 5663801 Spea_3415 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503263.1 4175059 D 398579 CDS YP_001503264.1 157963230 5663802 4175610..4176134 1 NC_009901.1 hypothetical protein 4176134 5663802 Spea_3416 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503264.1 4175610 D 398579 CDS YP_001503265.1 157963231 5663803 complement(4176241..4176768) 1 NC_009901.1 KEGG: sbm:Shew185_1422 lipoprotein, putative; putative lipoprotein 4176768 5663803 Spea_3417 Shewanella pealeana ATCC 700345 putative lipoprotein YP_001503265.1 4176241 R 398579 CDS YP_001503266.1 157963232 5663804 complement(4176899..4177684) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_4378 helix-turn-helix-domain containing protein AraC type; AraC family transcriptional regulator 4177684 5663804 Spea_3418 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001503266.1 4176899 R 398579 CDS YP_001503267.1 157963233 5663805 4177785..4179035 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_1047 transporter of the MFS superfamily; major facilitator transporter 4179035 5663805 Spea_3419 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001503267.1 4177785 D 398579 CDS YP_001503268.1 157963234 5663806 complement(4179110..4180168) 1 NC_009901.1 KEGG: ppr:PBPRB1341 hypothetical protein; hypothetical protein 4180168 5663806 Spea_3420 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503268.1 4179110 R 398579 CDS YP_001503269.1 157963235 5663807 complement(4180221..4181288) 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: ppr:PBPRB1340 putative secretion protein; secretion protein HlyD family protein 4181288 5663807 Spea_3421 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001503269.1 4180221 R 398579 CDS YP_001503270.1 157963236 5663808 4181389..4182255 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRB1339 hypothetical transcriptional regulator; LysR family transcriptional regulator 4182255 5663808 Spea_3422 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503270.1 4181389 D 398579 CDS YP_001503271.1 157963237 5663809 complement(4182331..4182795) 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_1874 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4182795 5663809 Spea_3423 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001503271.1 4182331 R 398579 CDS YP_001503272.1 157963238 5663810 complement(4182920..4185754) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: shw:Sputw3181_2351 TonB-dependent receptor; TonB-dependent receptor 4185754 5663810 Spea_3424 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001503272.1 4182920 R 398579 CDS YP_001503273.1 157963239 5663811 complement(4186107..4187489) 1 NC_009901.1 PFAM: Na+/H+ antiporter NhaC; KEGG: slo:Shew_0698 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 4187489 5663811 Spea_3425 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001503273.1 4186107 R 398579 CDS YP_001503274.1 157963240 5663812 complement(4187859..4188821) 1 NC_009901.1 KEGG: sbl:Sbal_3290 hypothetical protein; hypothetical protein 4188821 5663812 Spea_3426 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503274.1 4187859 R 398579 CDS YP_001503275.1 157963241 5663813 4189078..4190148 1 NC_009901.1 PFAM: permease; KEGG: vha:VIBHAR_05267 hypothetical protein; permease 4190148 5663813 Spea_3427 Shewanella pealeana ATCC 700345 permease YP_001503275.1 4189078 D 398579 CDS YP_001503276.1 157963242 5663814 complement(4190213..4191124) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VF1072 transcriptional regulators, LysR family; LysR family transcriptional regulator 4191124 5663814 Spea_3428 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503276.1 4190213 R 398579 CDS YP_001503277.1 157963243 5663815 complement(4191223..4192170) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_2959 transcriptional regulator, LysR family; LysR family transcriptional regulator 4192170 5663815 Spea_3429 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503277.1 4191223 R 398579 CDS YP_001503278.1 157963244 5663816 4192692..4197641 1 NC_009901.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: slo:Shew_0807 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 4197641 5663816 Spea_3430 Shewanella pealeana ATCC 700345 peptidase S8/S53 subtilisin kexin sedolisin YP_001503278.1 4192692 D 398579 CDS YP_001503279.1 157963245 5663817 4197903..4198115 1 NC_009901.1 PFAM: protein of unknown function DUF331; KEGG: slo:Shew_0695 protein of unknown function DUF331; hypothetical protein 4198115 5663817 Spea_3431 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503279.1 4197903 D 398579 CDS YP_001503280.1 157963246 5663818 complement(4198175..4198702) 1 NC_009901.1 KEGG: mfa:Mfla_2466 hypothetical protein; hypothetical protein 4198702 5663818 Spea_3432 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503280.1 4198175 R 398579 CDS YP_001503281.1 157963247 5663819 complement(4198741..4199619) 1 NC_009901.1 PFAM: 3'-5' exonuclease; KEGG: shm:Shewmr7_1014 3'-5' exonuclease; 3'-5' exonuclease 4199619 5663819 Spea_3433 Shewanella pealeana ATCC 700345 3'-5' exonuclease YP_001503281.1 4198741 R 398579 CDS YP_001503282.1 157963248 5663820 complement(4199710..4200309) 1 NC_009901.1 hypothetical protein 4200309 5663820 Spea_3434 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503282.1 4199710 R 398579 CDS YP_001503283.1 157963249 5663821 4200542..4201819 1 NC_009901.1 KEGG: shw:Sputw3181_2350 hypothetical protein; hypothetical protein 4201819 5663821 Spea_3435 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503283.1 4200542 D 398579 CDS YP_001503284.1 157963250 5663822 complement(4202034..4202570) 1 NC_009901.1 KEGG: sfr:Sfri_3634 hypothetical protein; hypothetical protein 4202570 5663822 Spea_3436 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503284.1 4202034 R 398579 CDS YP_001503285.1 157963251 5663823 complement(4202581..4203402) 1 NC_009901.1 KEGG: sfr:Sfri_3633 cytochrome c, putative; cytochrome c 4203402 5663823 Spea_3437 Shewanella pealeana ATCC 700345 cytochrome c YP_001503285.1 4202581 R 398579 CDS YP_001503286.1 157963252 5663824 4203857..4204609 1 NC_009901.1 PFAM: transcriptional regulator domain protein; KEGG: sfr:Sfri_3632 response regulator receiver protein; winged helix family two component response transcriptional regulator 4204609 5663824 Spea_3438 Shewanella pealeana ATCC 700345 winged helix family two component response transcriptional regulator YP_001503286.1 4203857 D 398579 CDS YP_001503287.1 157963253 5663825 4204666..4205184 1 NC_009901.1 KEGG: sfr:Sfri_3631 hypothetical protein; hypothetical protein 4205184 5663825 Spea_3439 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503287.1 4204666 D 398579 CDS YP_001503288.1 157963254 5663826 complement(4205304..4206134) 1 NC_009901.1 KEGG: slo:Shew_0689 hypothetical protein; hypothetical protein 4206134 5663826 Spea_3440 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503288.1 4205304 R 398579 CDS YP_001503289.1 157963255 5663827 4206613..4207269 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: sbm:Shew185_0941 DsbA oxidoreductase; DSBA oxidoreductase 4207269 5663827 Spea_3441 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001503289.1 4206613 D 398579 CDS YP_001503290.1 157963256 5663828 complement(4207352..4208365) 1 NC_009901.1 PFAM: glycosyl transferase group 1; KEGG: ana:all2291 glycosyltransferase; group 1 glycosyl transferase 4208365 5663828 Spea_3442 Shewanella pealeana ATCC 700345 group 1 glycosyl transferase YP_001503290.1 4207352 R 398579 CDS YP_001503291.1 157963257 5663829 complement(4208569..4208961) 1 NC_009901.1 KEGG: spc:Sputcn32_0803 hypothetical protein; hypothetical protein 4208961 5663829 Spea_3443 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503291.1 4208569 R 398579 CDS YP_001503292.1 157963258 5663830 4209369..4210919 1 NC_009901.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 4210919 5663830 Spea_3444 Shewanella pealeana ATCC 700345 anaerobic nitric oxide reductase transcriptional regulator YP_001503292.1 4209369 D 398579 CDS YP_001503293.1 157963259 5663831 4210948..4212420 1 NC_009901.1 PFAM: peptidase M16 domain protein; KEGG: shn:Shewana3_0842 peptidase M16 domain protein; peptidase M16 domain-containing protein 4212420 5663831 Spea_3445 Shewanella pealeana ATCC 700345 peptidase M16 domain-containing protein YP_001503293.1 4210948 D 398579 CDS YP_001503294.1 157963260 5663832 4212420..4214021 1 NC_009901.1 PFAM: peptidase M16 domain protein; KEGG: shn:Shewana3_0841 peptidase M16 domain protein; peptidase M16 domain-containing protein 4214021 5663832 Spea_3446 Shewanella pealeana ATCC 700345 peptidase M16 domain-containing protein YP_001503294.1 4212420 D 398579 CDS YP_001503295.1 157963261 5663833 4214219..4215232 1 NC_009901.1 PFAM: StbA family protein; KEGG: ppr:PBPRA0050 hypothetical StbA plasmid stable inheritance protein; StbA family protein 4215232 5663833 Spea_3447 Shewanella pealeana ATCC 700345 StbA family protein YP_001503295.1 4214219 D 398579 CDS YP_001503296.1 157963262 5663834 4215242..4215982 1 NC_009901.1 KEGG: ppr:PBPRA0051 hypothetical protein; hypothetical protein 4215982 5663834 Spea_3448 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503296.1 4215242 D 398579 CDS YP_001503297.1 157963263 5663835 complement(4216206..4217531) 1 NC_009901.1 catalyzes the formation of pyruvate from serine; D-serine dehydratase 4217531 5663835 Spea_3449 Shewanella pealeana ATCC 700345 D-serine dehydratase YP_001503297.1 4216206 R 398579 CDS YP_001503298.1 157963264 5663836 complement(4217550..4218887) 1 NC_009901.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; permease DsdX 4218887 5663836 Spea_3450 Shewanella pealeana ATCC 700345 permease DsdX YP_001503298.1 4217550 R 398579 CDS YP_001503299.1 157963265 5663837 4219098..4220069 1 NC_009901.1 regulates the synthesis and expression of the dsdXA operon and dadA gene; DNA-binding transcriptional regulator DsdC 4220069 5663837 Spea_3451 Shewanella pealeana ATCC 700345 DNA-binding transcriptional regulator DsdC YP_001503299.1 4219098 D 398579 CDS YP_001503300.1 157963266 5663838 4220681..4221202 1 NC_009901.1 KEGG: slo:Shew_0631 AFG1-family ATPase; ATPase-like protein 4221202 5663838 Spea_3452 Shewanella pealeana ATCC 700345 ATPase-like protein YP_001503300.1 4220681 D 398579 CDS YP_001503301.1 157963267 5663839 complement(4221496..4222065) 1 NC_009901.1 hypothetical protein 4222065 5663839 Spea_3453 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503301.1 4221496 R 398579 CDS YP_001503302.1 157963268 5663840 complement(4222148..4222978) 1 NC_009901.1 e14 prophage; cell death peptidase; inhibitor of T4 late gene expression; late inhibitor of T4; phage exclusion protein Lit 4222978 5663840 Spea_3454 Shewanella pealeana ATCC 700345 phage exclusion protein Lit YP_001503302.1 4222148 R 398579 CDS YP_001503303.1 157963269 5663841 complement(4223156..4223938) 1 NC_009901.1 KEGG: aba:Acid345_3545 hypothetical protein; hypothetical protein 4223938 5663841 Spea_3455 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503303.1 4223156 R 398579 CDS YP_001503304.1 157963270 5663842 complement(4224105..4224530) 1 NC_009901.1 hypothetical protein 4224530 5663842 Spea_3456 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503304.1 4224105 R 398579 CDS YP_001503305.1 157963271 5663843 complement(4225001..4225207) 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: sfr:Sfri_3420 transcriptional regulator, XRE family protein; XRE family transcriptional regulator 4225207 5663843 Spea_3457 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001503305.1 4225001 R 398579 CDS YP_001503306.1 157963272 5663844 4225336..4225875 1 NC_009901.1 KEGG: sbm:Shew185_4272 hypothetical protein; hypothetical protein 4225875 5663844 Spea_3458 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503306.1 4225336 D 398579 CDS YP_001503307.1 157963273 5663845 4225881..4227299 1 NC_009901.1 PFAM: helicase domain protein; type III restriction protein res subunit; KEGG: sbm:Shew185_4273 type III restriction protein res subunit; type III restriction protein res subunit 4227299 5663845 Spea_3459 Shewanella pealeana ATCC 700345 type III restriction protein res subunit YP_001503307.1 4225881 D 398579 CDS YP_001503308.1 157963274 5663846 complement(4227454..4228266) 1 NC_009901.1 KEGG: shn:Shewana3_1253 hypothetical protein; hypothetical protein 4228266 5663846 Spea_3460 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503308.1 4227454 R 398579 CDS YP_001503309.1 157963275 5663847 complement(4228606..4228884) 1 NC_009901.1 hypothetical protein 4228884 5663847 Spea_3461 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503309.1 4228606 R 398579 CDS YP_001503310.1 157963276 5663848 complement(4230224..4230607) 1 NC_009901.1 hypothetical protein 4230607 5663848 Spea_3462 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503310.1 4230224 R 398579 CDS YP_001503311.1 157963277 5663849 complement(4230609..4232651) 1 NC_009901.1 PFAM: integrase family protein; KEGG: vch:VC0183 hypothetical protein; integrase family protein 4232651 5663849 Spea_3463 Shewanella pealeana ATCC 700345 integrase family protein YP_001503311.1 4230609 R 398579 CDS YP_001503312.1 157963278 5663850 complement(4232651..4235341) 1 NC_009901.1 hypothetical protein 4235341 5663850 Spea_3464 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503312.1 4232651 R 398579 CDS YP_001503313.1 157963279 5663851 complement(4235342..4236721) 1 NC_009901.1 PFAM: integrase family protein; KEGG: spc:Sputcn32_0163 hypothetical protein; integrase family protein 4236721 5663851 Spea_3465 Shewanella pealeana ATCC 700345 integrase family protein YP_001503313.1 4235342 R 398579 CDS YP_001503314.1 157963280 5663852 4236894..4237751 1 NC_009901.1 PFAM: AFG1-family ATPase; KEGG: slo:Shew_0631 AFG1-family ATPase; AFG1 family ATPase 4237751 5663852 Spea_3466 Shewanella pealeana ATCC 700345 AFG1 family ATPase YP_001503314.1 4236894 D 398579 CDS YP_001503315.1 157963281 5663853 complement(4238253..4239269) 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 4239269 5663853 Spea_3467 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001503315.1 4238253 R 398579 CDS YP_001503316.1 157963282 5663854 4239548..4239817 1 NC_009901.1 KEGG: sfr:Sfri_2004 hypothetical protein; hypothetical protein 4239817 5663854 Spea_3468 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503316.1 4239548 D 398579 CDS YP_001503317.1 157963283 5663855 4239880..4240752 1 NC_009901.1 KEGG: mmz:MmarC7_1679 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4240752 5663855 Spea_3469 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503317.1 4239880 D 398579 CDS YP_001503318.1 157963284 5663856 complement(4240876..4241586) 1 NC_009901.1 hypothetical protein 4241586 5663856 Spea_3470 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503318.1 4240876 R 398579 CDS YP_001503319.1 157963285 5663857 complement(4241872..4242384) 1 NC_009901.1 KEGG: bbt:BBta_4307 putative membrane protein of unknown function; hypothetical protein 4242384 5663857 Spea_3471 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503319.1 4241872 R 398579 CDS YP_001503320.1 157963286 5663858 complement(4242371..4242817) 1 NC_009901.1 KEGG: vha:VIBHAR_01968 hypothetical protein; hypothetical protein 4242817 5663858 Spea_3472 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503320.1 4242371 R 398579 CDS YP_001503321.1 157963287 5663859 complement(4243039..4243737) 1 NC_009901.1 hypothetical protein 4243737 5663859 Spea_3473 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503321.1 4243039 R 398579 CDS YP_001503322.1 157963288 5663860 4244682..4244936 1 NC_009901.1 hypothetical protein 4244936 5663860 Spea_3474 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503322.1 4244682 D 398579 CDS YP_001503323.1 157963289 5663861 complement(4245221..4245562) 1 NC_009901.1 KEGG: vvy:VV2395 hypothetical protein; hypothetical protein 4245562 5663861 Spea_3475 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503323.1 4245221 R 398579 CDS YP_001503324.1 157963290 5663862 complement(4246047..4246826) 1 NC_009901.1 KEGG: cph:Cpha266_2334 lipase, class 3; hypothetical protein 4246826 5663862 Spea_3476 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503324.1 4246047 R 398579 CDS YP_001503325.1 157963291 5663863 complement(4247054..4249912) 1 NC_009901.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 4249912 5663863 Spea_3477 Shewanella pealeana ATCC 700345 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_001503325.1 4247054 R 398579 CDS YP_001503326.1 157963292 5663864 4250254..4251213 1 NC_009901.1 KEGG: slo:Shew_0627 hypothetical protein; hypothetical protein 4251213 5663864 Spea_3478 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503326.1 4250254 D 398579 CDS YP_001503327.1 157963293 5663865 4251227..4252126 1 NC_009901.1 KEGG: slo:Shew_0626 protein of unknown function DUF350; hypothetical protein 4252126 5663865 Spea_3479 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503327.1 4251227 D 398579 CDS YP_001503328.1 157963294 5663866 4252242..4253969 1 NC_009901.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 4253969 5663866 Spea_3480 Shewanella pealeana ATCC 700345 spermidine synthase YP_001503328.1 4252242 D 398579 CDS YP_001503329.1 157963295 5663867 4254061..4254474 1 NC_009901.1 KEGG: slo:Shew_0624 hypothetical protein; hypothetical protein 4254474 5663867 Spea_3481 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503329.1 4254061 D 398579 CDS YP_001503330.1 157963296 5663868 4254487..4255176 1 NC_009901.1 PFAM: PspA/IM30 family protein; KEGG: sdn:Sden_0697 PspA/IM30; phage shock protein A 4255176 5663868 Spea_3482 Shewanella pealeana ATCC 700345 phage shock protein A YP_001503330.1 4254487 D 398579 CDS YP_001503331.1 157963297 5663869 4255188..4255838 1 NC_009901.1 KEGG: shm:Shewmr7_0857 hypothetical protein; hypothetical protein 4255838 5663869 Spea_3483 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503331.1 4255188 D 398579 CDS YP_001503332.1 157963298 5663870 4255955..4256284 1 NC_009901.1 KEGG: slo:Shew_0621 hypothetical protein; hypothetical protein 4256284 5663870 Spea_3484 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503332.1 4255955 D 398579 CDS YP_001503333.1 157963299 5663871 4256343..4257140 1 NC_009901.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: son:SO_3768 ion transporter; Ion transport 2 domain-containing protein 4257140 5663871 Spea_3485 Shewanella pealeana ATCC 700345 Ion transport 2 domain-containing protein YP_001503333.1 4256343 D 398579 CDS YP_001503334.1 157963300 5663872 complement(4257245..4258732) 1 NC_009901.1 PFAM: adenylate cyclase; KEGG: slo:Shew_0619 adenylate cyclase; adenylate cyclase 4258732 5663872 Spea_3486 Shewanella pealeana ATCC 700345 adenylate cyclase YP_001503334.1 4257245 R 398579 CDS YP_001503335.1 157963301 5663873 4258965..4259645 1 NC_009901.1 PFAM: protein of unknown function DUF47; KEGG: slo:Shew_0618 protein of unknown function DUF47; hypothetical protein 4259645 5663873 Spea_3487 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503335.1 4258965 D 398579 CDS YP_001503336.1 157963302 5663874 4259670..4260938 1 NC_009901.1 PFAM: phosphate transporter; KEGG: slo:Shew_0617 phosphate transporter; phosphate transporter 4260938 5663874 Spea_3488 Shewanella pealeana ATCC 700345 phosphate transporter YP_001503336.1 4259670 D 398579 CDS YP_001503337.1 157963303 5663875 4261131..4261676 1 NC_009901.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: slo:Shew_0616 SH3 domain protein; SH3 type 3 domain-containing protein 4261676 5663875 Spea_3489 Shewanella pealeana ATCC 700345 SH3 type 3 domain-containing protein YP_001503337.1 4261131 D 398579 CDS YP_001503338.1 157963304 5663876 4262331..4265525 1 NC_009901.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4265525 5663876 Spea_3490 Shewanella pealeana ATCC 700345 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001503338.1 4262331 D 398579 CDS YP_001503339.1 157963305 5663877 4265879..4267759 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRA3375 putative methyl-accepting chemotaxis protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer 4267759 5663877 Spea_3491 Shewanella pealeana ATCC 700345 Cache sensor containing methyl-accepting chemotaxis sensory transducer YP_001503339.1 4265879 D 398579 CDS YP_001503340.1 157963306 5663878 4268076..4269956 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: ppr:PBPRA3375 putative methyl-accepting chemotaxis protein; Cache sensor containing methyl-accepting chemotaxis sensory transducer 4269956 5663878 Spea_3492 Shewanella pealeana ATCC 700345 Cache sensor containing methyl-accepting chemotaxis sensory transducer YP_001503340.1 4268076 D 398579 CDS YP_001503341.1 157963307 5663879 complement(4270023..4271762) 1 NC_009901.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 4271762 5663879 Spea_3493 Shewanella pealeana ATCC 700345 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001503341.1 4270023 R 398579 CDS YP_001503342.1 157963308 5663880 complement(4271762..4273627) 1 NC_009901.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 4273627 5663880 Spea_3494 Shewanella pealeana ATCC 700345 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001503342.1 4271762 R 398579 CDS YP_001503343.1 157963309 5663881 complement(4273937..4274278) 1 NC_009901.1 KEGG: slo:Shew_0605 hypothetical protein; hypothetical protein 4274278 5663881 Spea_3495 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503343.1 4273937 R 398579 CDS YP_001503344.1 157963310 5663882 complement(4274483..4274683) 1 NC_009901.1 KEGG: sdn:Sden_1261 hypothetical protein; hypothetical protein 4274683 5663882 Spea_3496 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503344.1 4274483 R 398579 CDS YP_001503345.1 157963311 5663883 4275090..4276625 1 NC_009901.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: slo:Shew_0604 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 4276625 5663883 Spea_3497 Shewanella pealeana ATCC 700345 DEAD/DEAH box helicase YP_001503345.1 4275090 D 398579 CDS YP_001503346.1 157963312 5663884 complement(4276820..4278229) 1 NC_009901.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 4278229 5663884 Spea_3498 Shewanella pealeana ATCC 700345 ATP-dependent RNA helicase DbpA YP_001503346.1 4276820 R 398579 CDS YP_001503347.1 157963313 5663885 complement(4278571..4279266) 1 NC_009901.1 KEGG: dvl:Dvul_0140 lipoprotein, putative; hypothetical protein 4279266 5663885 Spea_3499 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503347.1 4278571 R 398579 CDS YP_001503348.1 157963314 5663886 complement(4279432..4279641) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: shw:Sputw3181_0827 hypothetical protein; hypothetical protein 4279641 5663886 Spea_3500 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503348.1 4279432 R 398579 CDS YP_001503349.1 157963315 5663887 4279723..4281693 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shw:Sputw3181_0826 ABC transporter related; ABC transporter-like protein 4281693 5663887 Spea_3501 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503349.1 4279723 D 398579 CDS YP_001503350.1 157963316 5663888 4281835..4282308 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0592 hypothetical protein; hypothetical protein 4282308 5663888 Spea_3502 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503350.1 4281835 D 398579 CDS YP_001503351.1 157963317 5663889 complement(4282427..4284022) 1 NC_009901.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: slo:Shew_0591 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase 4284022 5663889 Spea_3503 Shewanella pealeana ATCC 700345 glucose-methanol-choline oxidoreductase YP_001503351.1 4282427 R 398579 CDS YP_001503352.1 157963318 5663890 complement(4284204..4284722) 1 NC_009901.1 KEGG: slo:Shew_0590 hypothetical protein; hypothetical protein 4284722 5663890 Spea_3504 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503352.1 4284204 R 398579 CDS YP_001503353.1 157963319 5663891 4284889..4285869 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: shm:Shewmr7_3286 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4285869 5663891 Spea_3505 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001503353.1 4284889 D 398579 CDS YP_001503354.1 157963320 5663892 4285863..4286117 1 NC_009901.1 PFAM: protein of unknown function UPF0270; KEGG: saz:Sama_3001 protein of unknown function UPF0270; hypothetical protein 4286117 5663892 Spea_3506 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503354.1 4285863 D 398579 CDS YP_001503355.1 157963321 5663893 4286248..4287135 1 NC_009901.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: slo:Shew_0587 phosphoribulokinase; phosphoribulokinase 4287135 5663893 Spea_3507 Shewanella pealeana ATCC 700345 phosphoribulokinase YP_001503355.1 4286248 D 398579 CDS YP_001503356.1 157963322 5663894 complement(4287870..4288652) 1 NC_009901.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: sbl:Sbal_0579 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4288652 5663894 Spea_3508 Shewanella pealeana ATCC 700345 Sel1 domain-containing protein YP_001503356.1 4287870 R 398579 CDS YP_001503357.1 157963323 5663895 4289106..4289741 1 NC_009901.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 4289741 5663895 Spea_3509 Shewanella pealeana ATCC 700345 cAMP-regulatory protein YP_001503357.1 4289106 D 398579 CDS YP_001503358.1 157963324 5663896 4289849..4290157 1 NC_009901.1 KEGG: shn:Shewana3_0616 hypothetical protein; hypothetical protein 4290157 5663896 Spea_3510 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503358.1 4289849 D 398579 CDS YP_001503359.1 157963325 5663897 4290267..4290941 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0583 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4290941 5663897 Spea_3511 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001503359.1 4290267 D 398579 CDS YP_001503360.1 157963326 5663898 4290938..4292263 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_0582 integral membrane sensor signal transduction histidine kinase; histidine kinase 4292263 5663898 Spea_3512 Shewanella pealeana ATCC 700345 histidine kinase YP_001503360.1 4290938 D 398579 CDS YP_001503361.1 157963327 5663899 complement(4292335..4293135) 1 NC_009901.1 KEGG: shw:Sputw3181_3526 hypothetical protein; hypothetical protein 4293135 5663899 Spea_3513 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503361.1 4292335 R 398579 CDS YP_001503362.1 157963328 5663900 complement(4293558..4295018) 1 NC_009901.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 4295018 astD 5663900 astD Shewanella pealeana ATCC 700345 succinylglutamic semialdehyde dehydrogenase YP_001503362.1 4293558 R 398579 CDS YP_001503363.1 157963329 5663901 complement(4295028..4296047) 1 NC_009901.1 PFAM: arginine N-succinyltransferase beta subunit; KEGG: slo:Shew_0579 arginine N-succinyltransferase; arginine N-succinyltransferase 4296047 5663901 Spea_3515 Shewanella pealeana ATCC 700345 arginine N-succinyltransferase YP_001503363.1 4295028 R 398579 CDS YP_001503364.1 157963330 5663902 complement(4296183..4297400) 1 NC_009901.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 4297400 argD 5663902 argD Shewanella pealeana ATCC 700345 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_001503364.1 4296183 R 398579 CDS YP_001503365.1 157963331 5663903 complement(4298066..4299208) 1 NC_009901.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: shn:Shewana3_0608 putative signal transduction protein; metal-dependent hydrolase HDOD 4299208 5663903 Spea_3517 Shewanella pealeana ATCC 700345 metal-dependent hydrolase HDOD YP_001503365.1 4298066 R 398579 CDS YP_001503366.1 157963332 5663904 complement(4299821..4302316) 1 NC_009901.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: slo:Shew_0576 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 4302316 5663904 Spea_3518 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001503366.1 4299821 R 398579 CDS YP_001503367.1 157963333 5663905 complement(4303008..4303580) 1 NC_009901.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: shn:Shewana3_0606 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 4303580 5663905 Spea_3519 Shewanella pealeana ATCC 700345 glutamine amidotransferase of anthranilate synthase YP_001503367.1 4303008 R 398579 CDS YP_001503368.1 157963334 5663906 complement(4303710..4305074) 1 NC_009901.1 KEGG: dps:DP2970 hypothetical protein; hypothetical protein 4305074 5663906 Spea_3520 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503368.1 4303710 R 398579 CDS YP_001503369.1 157963335 5663907 complement(4305077..4305715) 1 NC_009901.1 TIGRFAM: TonB family protein; KEGG: dps:DP2971 similar to TonB protein; TonB family protein 4305715 5663907 Spea_3521 Shewanella pealeana ATCC 700345 TonB family protein YP_001503369.1 4305077 R 398579 CDS YP_001503370.1 157963336 5663908 complement(4305715..4306116) 1 NC_009901.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dps:DP2972 biopolymer transport protein (ExbD2); biopolymer transport protein ExbD/TolR 4306116 5663908 Spea_3522 Shewanella pealeana ATCC 700345 biopolymer transport protein ExbD/TolR YP_001503370.1 4305715 R 398579 CDS YP_001503371.1 157963337 5663909 complement(4306109..4306627) 1 NC_009901.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: vpa:VPA0153 TonB system transport protein ExbB2; MotA/TolQ/ExbB proton channel 4306627 5663909 Spea_3523 Shewanella pealeana ATCC 700345 MotA/TolQ/ExbB proton channel YP_001503371.1 4306109 R 398579 CDS YP_001503372.1 157963338 5663910 complement(4306614..4308023) 1 NC_009901.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: dps:DP2974 similar to transport protein TolQ; MotA/TolQ/ExbB proton channel 4308023 5663910 Spea_3524 Shewanella pealeana ATCC 700345 MotA/TolQ/ExbB proton channel YP_001503372.1 4306614 R 398579 CDS YP_001503373.1 157963339 5663911 complement(4308023..4308805) 1 NC_009901.1 KEGG: dps:DP2975 hypothetical protein; hypothetical protein 4308805 5663911 Spea_3525 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503373.1 4308023 R 398579 CDS YP_001503374.1 157963340 5663912 complement(4308799..4309626) 1 NC_009901.1 KEGG: dps:DP2976 hypothetical protein; hypothetical protein 4309626 5663912 Spea_3526 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503374.1 4308799 R 398579 CDS YP_001503375.1 157963341 5663913 complement(4309623..4310315) 1 NC_009901.1 KEGG: dps:DP2977 hypothetical protein; hypothetical protein 4310315 5663913 Spea_3527 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503375.1 4309623 R 398579 CDS YP_001503376.1 157963342 5663914 complement(4310312..4311646) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dps:DP2978 related to iron (III) ABC transporter, ATP-binding protein; ABC transporter-like protein 4311646 5663914 Spea_3528 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503376.1 4310312 R 398579 CDS YP_001503377.1 157963343 5663915 complement(4311646..4312692) 1 NC_009901.1 PFAM: transport system permease protein; KEGG: dps:DP2979 probable iron (III) ABC transporter, permease protein; transport system permease 4312692 5663915 Spea_3529 Shewanella pealeana ATCC 700345 transport system permease YP_001503377.1 4311646 R 398579 CDS YP_001503378.1 157963344 5663916 complement(4312683..4313681) 1 NC_009901.1 PFAM: periplasmic binding protein; KEGG: dps:DP2980 probable iron (III) ABC transporter, periplasmic-binding protein; periplasmic-binding protein 4313681 5663916 Spea_3530 Shewanella pealeana ATCC 700345 periplasmic-binding protein YP_001503378.1 4312683 R 398579 CDS YP_001503379.1 157963345 5663917 complement(4313691..4315727) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: dps:DP2981 related to TonB dependent outer membrane receptor; TonB-dependent receptor plug 4315727 5663917 Spea_3531 Shewanella pealeana ATCC 700345 TonB-dependent receptor plug YP_001503379.1 4313691 R 398579 CDS YP_001503380.1 157963346 5663918 complement(4316129..4316590) 1 NC_009901.1 PFAM: Stringent starvation protein B; KEGG: slo:Shew_0574 stringent starvation protein B; ClpXP protease specificity-enhancing factor 4316590 5663918 Spea_3532 Shewanella pealeana ATCC 700345 ClpXP protease specificity-enhancing factor YP_001503380.1 4316129 R 398579 CDS YP_001503381.1 157963347 5663919 complement(4316590..4317219) 1 NC_009901.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 4317219 sspA 5663919 sspA Shewanella pealeana ATCC 700345 stringent starvation protein A YP_001503381.1 4316590 R 398579 CDS YP_001503382.1 157963348 5663920 complement(4317329..4318024) 1 NC_009901.1 PFAM: cytochrome c1; KEGG: saz:Sama_3019 ubiquinol-cytochrome c reductase cytochrome c1 subunit; cytochrome c1 4318024 5663920 Spea_3534 Shewanella pealeana ATCC 700345 cytochrome c1 YP_001503382.1 4317329 R 398579 CDS YP_001503383.1 157963349 5663921 complement(4318024..4319238) 1 NC_009901.1 PFAM: Cytochrome b/b6 domain; KEGG: slo:Shew_0571 cytochrome b/b6, N-terminal domain; cytochrome b/b6 domain-containing protein 4319238 5663921 Spea_3535 Shewanella pealeana ATCC 700345 cytochrome b/b6 domain-containing protein YP_001503383.1 4318024 R 398579 CDS YP_001503384.1 157963350 5663922 complement(4319238..4319879) 1 NC_009901.1 KEGG: slo:Shew_0570 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 4319879 5663922 Spea_3536 Shewanella pealeana ATCC 700345 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001503384.1 4319238 R 398579 CDS YP_001503385.1 157963351 5663923 complement(4320239..4321117) 1 NC_009901.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: shn:Shewana3_0600 HflC protein; HflC protein 4321117 5663923 Spea_3537 Shewanella pealeana ATCC 700345 HflC protein YP_001503385.1 4320239 R 398579 CDS YP_001503386.1 157963352 5663924 complement(4321121..4322272) 1 NC_009901.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: sbm:Shew185_3765 HflK protein; HflK protein 4322272 5663924 Spea_3538 Shewanella pealeana ATCC 700345 HflK protein YP_001503386.1 4321121 R 398579 CDS YP_001503387.1 157963353 5663925 complement(4322322..4323617) 1 NC_009901.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: slo:Shew_0567 GTP-binding protein, HSR1-related; small GTP-binding protein 4323617 5663925 Spea_3539 Shewanella pealeana ATCC 700345 small GTP-binding protein YP_001503387.1 4322322 R 398579 CDS YP_001503388.1 157963354 5663926 complement(4323638..4323916) 1 NC_009901.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: slo:Shew_0566 RNA chaperone Hfq; RNA chaperone Hfq 4323916 5663926 Spea_3540 Shewanella pealeana ATCC 700345 RNA chaperone Hfq YP_001503388.1 4323638 R 398579 CDS YP_001503389.1 157963355 5663927 complement(4324010..4324900) 1 NC_009901.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4324900 miaA 5663927 miaA Shewanella pealeana ATCC 700345 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001503389.1 4324010 R 398579 CDS YP_001503390.1 157963356 5663928 complement(4324926..4326812) 1 NC_009901.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4326812 mutL 5663928 mutL Shewanella pealeana ATCC 700345 DNA mismatch repair protein YP_001503390.1 4324926 R 398579 CDS YP_001503391.1 157963357 5663929 complement(4326832..4328154) 1 NC_009901.1 PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: slo:Shew_0563 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 4328154 5663929 Spea_3543 Shewanella pealeana ATCC 700345 N-acetylmuramoyl-L-alanine amidase YP_001503391.1 4326832 R 398579 CDS YP_001503392.1 157963358 5663930 complement(4328138..4328620) 1 NC_009901.1 PFAM: protein of unknown function UPF0079; KEGG: shn:Shewana3_0593 protein of unknown function UPF0079; hypothetical protein 4328620 5663930 Spea_3544 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503392.1 4328138 R 398579 CDS YP_001503393.1 157963359 5663931 complement(4328695..4330173) 1 NC_009901.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: spc:Sputcn32_3285 carbohydrate kinase, YjeF related protein; carbohydrate kinase 4330173 5663931 Spea_3545 Shewanella pealeana ATCC 700345 carbohydrate kinase YP_001503393.1 4328695 R 398579 CDS YP_001503394.1 157963360 5663932 complement(4330369..4330824) 1 NC_009901.1 KEGG: saz:Sama_3031 hypothetical protein; hypothetical protein 4330824 5663932 Spea_3546 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503394.1 4330369 R 398579 CDS YP_001503395.1 157963361 5664829 complement(4332460..4333005) 1 NC_009901.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 4333005 5664829 Spea_3547 Shewanella pealeana ATCC 700345 oligoribonuclease YP_001503395.1 4332460 R 398579 CDS YP_001503396.1 157963362 5663934 4333117..4334181 1 NC_009901.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 4334181 5663934 Spea_3548 Shewanella pealeana ATCC 700345 ribosome-associated GTPase YP_001503396.1 4333117 D 398579 CDS YP_001503397.1 157963363 5663935 4334347..4335210 1 NC_009901.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 4335210 psd 5663935 psd Shewanella pealeana ATCC 700345 phosphatidylserine decarboxylase YP_001503397.1 4334347 D 398579 CDS YP_001503398.1 157963364 5663936 4335226..4336104 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0548 protein of unknown function DUF6, transmembrane; hypothetical protein 4336104 5663936 Spea_3550 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503398.1 4335226 D 398579 CDS YP_001503399.1 157963365 5663937 4336174..4339362 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: slo:Shew_0555 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 4339362 5663937 Spea_3551 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001503399.1 4336174 D 398579 CDS YP_001503400.1 157963366 5663938 4339387..4340088 1 NC_009901.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: she:Shewmr4_0586 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 4340088 5663938 Spea_3552 Shewanella pealeana ATCC 700345 glycerophosphoryl diester phosphodiesterase YP_001503400.1 4339387 D 398579 CDS YP_001503401.1 157963367 5663939 complement(4340168..4340512) 1 NC_009901.1 KEGG: son:SO_0586 hypothetical protein; hypothetical protein 4340512 5663939 Spea_3553 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503401.1 4340168 R 398579 CDS YP_001503402.1 157963368 5663940 4340562..4341488 1 NC_009901.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: slo:Shew_0553 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase 4341488 5663940 Spea_3554 Shewanella pealeana ATCC 700345 D-isomer specific 2-hydroxyacid dehydrogenase YP_001503402.1 4340562 D 398579 CDS YP_001503403.1 157963369 5663941 4341669..4341860 1 NC_009901.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: shn:Shewana3_0581 BFD domain protein (2Fe-2S)-binding domain protein; BFD/(2Fe-2S)-binding domain-containing protein 4341860 5663941 Spea_3555 Shewanella pealeana ATCC 700345 BFD/(2Fe-2S)-binding domain-containing protein YP_001503403.1 4341669 D 398579 CDS YP_001503404.1 157963370 5663942 complement(4342294..4344561) 1 NC_009901.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 4344561 5663942 Spea_3556 Shewanella pealeana ATCC 700345 DNA topoisomerase IV subunit A YP_001503404.1 4342294 R 398579 CDS YP_001503405.1 157963371 5663943 complement(4344561..4345703) 1 NC_009901.1 KEGG: slo:Shew_0550 L-sorbosone dehydrogenase, putative; L-sorbosone dehydrogenase 4345703 5663943 Spea_3557 Shewanella pealeana ATCC 700345 L-sorbosone dehydrogenase YP_001503405.1 4344561 R 398579 CDS YP_001503406.1 157963372 5663944 complement(4345741..4347636) 1 NC_009901.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 4347636 5663944 Spea_3558 Shewanella pealeana ATCC 700345 DNA topoisomerase IV subunit B YP_001503406.1 4345741 R 398579 CDS YP_001503407.1 157963373 5663945 complement(4347683..4348255) 1 NC_009901.1 PFAM: protein of unknown function UPF0227; KEGG: slo:Shew_0548 protein of unknown function UPF0227; hypothetical protein 4348255 5663945 Spea_3559 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503407.1 4347683 R 398579 CDS YP_001503408.1 157963374 5663946 complement(4348283..4349122) 1 NC_009901.1 PFAM: metallophosphoesterase; Calcineurin phosphoesterase domain protein; KEGG: shm:Shewmr7_0756 calcineurin phosphoesterase C-terminal domain protein; calcineurin phosphoesterase domain-containing protein 4349122 5663946 Spea_3560 Shewanella pealeana ATCC 700345 calcineurin phosphoesterase domain-containing protein YP_001503408.1 4348283 R 398579 CDS YP_001503409.1 157963375 5663947 complement(4349144..4349578) 1 NC_009901.1 PFAM: protein of unknown function DUF1249; KEGG: shw:Sputw3181_3405 protein of unknown function DUF1249; hypothetical protein 4349578 5663947 Spea_3561 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503409.1 4349144 R 398579 CDS YP_001503410.1 157963376 5663948 complement(4349626..4350237) 1 NC_009901.1 PFAM: NUDIX hydrolase; KEGG: slo:Shew_0545 ADP-ribose diphosphatase; NUDIX hydrolase 4350237 5663948 Spea_3562 Shewanella pealeana ATCC 700345 NUDIX hydrolase YP_001503410.1 4349626 R 398579 CDS YP_001503411.1 157963377 5663949 4350531..4351835 1 NC_009901.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 4351835 tolC 5663949 tolC Shewanella pealeana ATCC 700345 outer membrane channel protein YP_001503411.1 4350531 D 398579 CDS YP_001503412.1 157963378 5663950 complement(4351942..4352679) 1 NC_009901.1 KEGG: sbm:Shew185_0780 hypothetical protein; hypothetical protein 4352679 5663950 Spea_3564 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503412.1 4351942 R 398579 CDS YP_001503413.1 157963379 5663951 complement(4352682..4353653) 1 NC_009901.1 KEGG: slo:Shew_0542 hypothetical protein; hypothetical protein 4353653 5663951 Spea_3565 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503413.1 4352682 R 398579 CDS YP_001503414.1 157963380 5663952 complement(4353666..4354145) 1 NC_009901.1 PFAM: protein of unknown function DUF461; KEGG: spc:Sputcn32_0765 protein of unknown function DUF461; hypothetical protein 4354145 5663952 Spea_3566 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503414.1 4353666 R 398579 CDS YP_001503415.1 157963381 5663953 4354179..4354916 1 NC_009901.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: shn:Shewana3_0721 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 4354916 5663953 Spea_3567 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase/isomerase YP_001503415.1 4354179 D 398579 CDS YP_001503416.1 157963382 5663954 complement(4355124..4355324) 1 NC_009901.1 PFAM: PspC domain protein; KEGG: slo:Shew_0538 phage shock protein C, PspC; phage shock protein C 4355324 5663954 Spea_3568 Shewanella pealeana ATCC 700345 phage shock protein C YP_001503416.1 4355124 R 398579 CDS YP_001503417.1 157963383 5663955 complement(4355453..4355758) 1 NC_009901.1 KEGG: slo:Shew_0537 hypothetical protein; hypothetical protein 4355758 5663955 Spea_3569 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503417.1 4355453 R 398579 CDS YP_001503418.1 157963384 5663956 complement(4356098..4357084) 1 NC_009901.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: slo:Shew_0536 TIM-barrel protein, YjbN family; tRNA-dihydrouridine synthase A 4357084 5663956 Spea_3570 Shewanella pealeana ATCC 700345 tRNA-dihydrouridine synthase A YP_001503418.1 4356098 R 398579 CDS YP_001503419.1 157963385 5663957 complement(4357309..4358259) 1 NC_009901.1 PFAM: regulatory protein LysR; KEGG: shw:Sputw3181_3897 transcriptional regulator, LysR family; LysR family transcriptional regulator 4358259 5663957 Spea_3571 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503419.1 4357309 R 398579 CDS YP_001503420.1 157963386 5663958 complement(4358243..4359220) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0179 transcriptional regulator, LysR family; LysR family transcriptional regulator 4359220 5663958 Spea_3572 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503420.1 4358243 R 398579 CDS YP_001503421.1 157963387 5663959 4359631..4361781 1 NC_009901.1 KEGG: son:SO_1779 decaheme cytochrome c; decaheme cytochrome c 4361781 5663959 Spea_3573 Shewanella pealeana ATCC 700345 decaheme cytochrome c YP_001503421.1 4359631 D 398579 CDS YP_001503422.1 157963388 5663960 complement(4362382..4364142) 1 NC_009901.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; KEGG: shw:Sputw3181_0118 flavocytochrome c; flavocytochrome c 4364142 5663960 Spea_3574 Shewanella pealeana ATCC 700345 flavocytochrome c YP_001503422.1 4362382 R 398579 CDS YP_001503423.1 157963389 5663961 complement(4364337..4366013) 1 NC_009901.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: spc:Sputcn32_2431 phenylalanine/histidine ammonia-lyase; phenylalanine/histidine ammonia-lyase 4366013 5663961 Spea_3575 Shewanella pealeana ATCC 700345 phenylalanine/histidine ammonia-lyase YP_001503423.1 4364337 R 398579 CDS YP_001503424.1 157963390 5663962 complement(4366442..4367662) 1 NC_009901.1 PFAM: histidine kinase A domain protein; KEGG: shn:Shewana3_4006 histidine kinase A domain protein; histidine kinase A domain-containing protein 4367662 5663962 Spea_3576 Shewanella pealeana ATCC 700345 histidine kinase A domain-containing protein YP_001503424.1 4366442 R 398579 CDS YP_001503425.1 157963391 5663963 complement(4367649..4368323) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO_4623 DNA-binding response regulator; two component transcriptional regulator 4368323 5663963 Spea_3577 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001503425.1 4367649 R 398579 CDS YP_001503426.1 157963392 5663964 complement(4368327..4369094) 1 NC_009901.1 PFAM: regulatory protein LuxR; KEGG: son:SO_4624 transcriptional regulator, LuxR family; LuxR family transcriptional regulator 4369094 5663964 Spea_3578 Shewanella pealeana ATCC 700345 LuxR family transcriptional regulator YP_001503426.1 4368327 R 398579 CDS YP_001503427.1 157963393 5663965 complement(4369592..4370854) 1 NC_009901.1 KEGG: slo:Shew_3276 hypothetical protein; hypothetical protein 4370854 5663965 Spea_3579 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503427.1 4369592 R 398579 CDS YP_001503428.1 157963394 5663966 complement(4370968..4372044) 1 NC_009901.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4372044 alr 5663966 alr Shewanella pealeana ATCC 700345 alanine racemase YP_001503428.1 4370968 R 398579 CDS YP_001503429.1 157963395 5663967 complement(4372138..4373544) 1 NC_009901.1 KEGG: slo:Shew_3278 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 4373544 5663967 Spea_3581 Shewanella pealeana ATCC 700345 replicative DNA helicase YP_001503429.1 4372138 R 398579 CDS YP_001503430.1 157963396 5663968 4373668..4375899 1 NC_009901.1 KEGG: slo:Shew_3279 hypothetical protein; hypothetical protein 4375899 5663968 Spea_3582 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503430.1 4373668 D 398579 CDS YP_001503431.1 157963397 5663969 complement(4376534..4376986) 1 NC_009901.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 4376986 rplI 5663969 rplI Shewanella pealeana ATCC 700345 50S ribosomal protein L9 YP_001503431.1 4376534 R 398579 CDS YP_001503432.1 157963398 5663970 complement(4377014..4377241) 1 NC_009901.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 4377241 rpsR 5663970 rpsR Shewanella pealeana ATCC 700345 30S ribosomal protein S18 YP_001503432.1 4377014 R 398579 CDS YP_001503433.1 157963399 5663971 complement(4377253..4377558) 1 NC_009901.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 4377558 5663971 Spea_3585 Shewanella pealeana ATCC 700345 primosomal replication protein N YP_001503433.1 4377253 R 398579 CDS YP_001503434.1 157963400 5663972 complement(4377567..4377980) 1 NC_009901.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 4377980 rpsF 5663972 rpsF Shewanella pealeana ATCC 700345 30S ribosomal protein S6 YP_001503434.1 4377567 R 398579 CDS YP_001503435.1 157963401 5663973 4378304..4379047 1 NC_009901.1 PFAM: protein of unknown function DUF481; KEGG: sbm:Shew185_0710 protein of unknown function DUF481; hypothetical protein 4379047 5663973 Spea_3587 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503435.1 4378304 D 398579 CDS YP_001503436.1 157963402 5663974 complement(4379122..4381209) 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: sfr:Sfri_3635 prolyl oligopeptidase; prolyl oligopeptidase 4381209 5663974 Spea_3588 Shewanella pealeana ATCC 700345 prolyl oligopeptidase YP_001503436.1 4379122 R 398579 CDS YP_001503437.1 157963403 5663975 complement(4381422..4382162) 1 NC_009901.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 4382162 5663975 Spea_3589 Shewanella pealeana ATCC 700345 23S rRNA (guanosine-2'-O-)-methyltransferase YP_001503437.1 4381422 R 398579 CDS YP_001503438.1 157963404 5663976 complement(4382163..4384622) 1 NC_009901.1 KEGG: slo:Shew_3289 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; ribonuclease R 4384622 5663976 Spea_3590 Shewanella pealeana ATCC 700345 ribonuclease R YP_001503438.1 4382163 R 398579 CDS YP_001503439.1 157963405 5663977 complement(4384665..4385288) 1 NC_009901.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: slo:Shew_3290 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4385288 5663977 Spea_3591 Shewanella pealeana ATCC 700345 Sel1 domain-containing protein YP_001503439.1 4384665 R 398579 CDS YP_001503440.1 157963406 5663978 complement(4385473..4386768) 1 NC_009901.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 4386768 5663978 Spea_3592 Shewanella pealeana ATCC 700345 adenylosuccinate synthetase YP_001503440.1 4385473 R 398579 CDS YP_001503441.1 157963407 5663979 complement(4386835..4387023) 1 NC_009901.1 KEGG: slo:Shew_3292 hypothetical protein; hypothetical protein 4387023 5663979 Spea_3593 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503441.1 4386835 R 398579 CDS YP_001503442.1 157963408 5663980 complement(4387288..4387680) 1 NC_009901.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 4387680 rpsI 5663980 rpsI Shewanella pealeana ATCC 700345 30S ribosomal protein S9 YP_001503442.1 4387288 R 398579 CDS YP_001503443.1 157963409 5663981 complement(4387695..4388126) 1 NC_009901.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 4388126 rplM 5663981 rplM Shewanella pealeana ATCC 700345 50S ribosomal protein L13 YP_001503443.1 4387695 R 398579 CDS YP_001503444.1 157963410 5663982 complement(4388492..4389595) 1 NC_009901.1 PFAM: AFG1-family ATPase; KEGG: slo:Shew_3295 AFG1-family ATPase; AFG1 family ATPase 4389595 5663982 Spea_3596 Shewanella pealeana ATCC 700345 AFG1 family ATPase YP_001503444.1 4388492 R 398579 CDS YP_001503445.1 157963411 5663983 4389886..4390242 1 NC_009901.1 hypothetical protein 4390242 5663983 Spea_3597 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503445.1 4389886 D 398579 CDS YP_001503446.1 157963412 5663984 4390475..4391830 1 NC_009901.1 KEGG: slo:Shew_3296 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do 4391830 5663984 Spea_3598 Shewanella pealeana ATCC 700345 protease Do YP_001503446.1 4390475 D 398579 CDS YP_001503447.1 157963413 5663985 4391967..4393049 1 NC_009901.1 KEGG: son:SO_3943 protease DegS; TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; periplasmic serine protease DegS 4393049 5663985 Spea_3599 Shewanella pealeana ATCC 700345 periplasmic serine protease DegS YP_001503447.1 4391967 D 398579 CDS YP_001503448.1 157963414 5663986 complement(4393686..4395356) 1 NC_009901.1 KEGG: ppd:Ppro_3498 hypothetical protein; hypothetical protein 4395356 5663986 Spea_3600 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503448.1 4393686 R 398579 CDS YP_001503449.1 157963415 5663987 complement(4395511..4396185) 1 NC_009901.1 PFAM: response regulator receiver; KEGG: vha:VIBHAR_05158 hypothetical protein; response regulator receiver protein 4396185 5663987 Spea_3601 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001503449.1 4395511 R 398579 CDS YP_001503450.1 157963416 5663988 complement(4396185..4397579) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: vha:VIBHAR_05159 hypothetical protein; histidine kinase 4397579 5663988 Spea_3602 Shewanella pealeana ATCC 700345 histidine kinase YP_001503450.1 4396185 R 398579 CDS YP_001503451.1 157963417 5663989 complement(4397724..4398986) 1 NC_009901.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4398986 5663989 Spea_3603 Shewanella pealeana ATCC 700345 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001503451.1 4397724 R 398579 CDS YP_001503452.1 157963418 5663990 complement(4399008..4399259) 1 NC_009901.1 PFAM: BolA family protein; KEGG: slo:Shew_3299 BolA family protein; BolA family protein 4399259 5663990 Spea_3604 Shewanella pealeana ATCC 700345 BolA family protein YP_001503452.1 4399008 R 398579 CDS YP_001503453.1 157963419 5663991 complement(4399273..4399566) 1 NC_009901.1 KEGG: shn:Shewana3_0682 SpoIIAA family protein; SpoIIAA family protein 4399566 5663991 Spea_3605 Shewanella pealeana ATCC 700345 SpoIIAA family protein YP_001503453.1 4399273 R 398579 CDS YP_001503454.1 157963420 5663992 complement(4399566..4400237) 1 NC_009901.1 PFAM: toluene tolerance family protein; KEGG: sbl:Sbal_3659 toluene tolerance family protein; toluene tolerance family protein 4400237 5663992 Spea_3606 Shewanella pealeana ATCC 700345 toluene tolerance family protein YP_001503454.1 4399566 R 398579 CDS YP_001503455.1 157963421 5663993 complement(4400270..4400740) 1 NC_009901.1 PFAM: Mammalian cell entry related domain protein; KEGG: shw:Sputw3181_3450 mammalian cell entry related domain protein; hypothetical protein 4400740 5663993 Spea_3607 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503455.1 4400270 R 398579 CDS YP_001503456.1 157963422 5663994 complement(4400813..4401598) 1 NC_009901.1 PFAM: protein of unknown function DUF140; KEGG: slo:Shew_3303 protein of unknown function DUF140; hypothetical protein 4401598 5663994 Spea_3608 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503456.1 4400813 R 398579 CDS YP_001503457.1 157963423 5663995 complement(4401585..4402397) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_3304 ABC transporter-related protein; ABC transporter-like protein 4402397 5663995 Spea_3609 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503457.1 4401585 R 398579 CDS YP_001503458.1 157963424 5663996 4402573..4403532 1 NC_009901.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: slo:Shew_3305 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter 4403532 5663996 Spea_3610 Shewanella pealeana ATCC 700345 CaCA family Na(+)/Ca(+) antiporter YP_001503458.1 4402573 D 398579 CDS YP_001503459.1 157963425 5663997 4403579..4404556 1 NC_009901.1 KEGG: slo:Shew_3306 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 4404556 5663997 Spea_3611 Shewanella pealeana ATCC 700345 KpsF/GutQ family protein YP_001503459.1 4403579 D 398579 CDS YP_001503460.1 157963426 5663998 4404558..4405109 1 NC_009901.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 4405109 5663998 Spea_3612 Shewanella pealeana ATCC 700345 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001503460.1 4404558 D 398579 CDS YP_001503461.1 157963427 5663999 4405106..4405663 1 NC_009901.1 PFAM: protein of unknown function DUF1239; KEGG: slo:Shew_3308 protein of unknown function DUF1239; hypothetical protein 4405663 5663999 Spea_3613 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503461.1 4405106 D 398579 CDS YP_001503462.1 157963428 5664000 4405734..4406273 1 NC_009901.1 TIGRFAM: Cell envelope biogenesis YhbN; PFAM: OstA family protein; KEGG: slo:Shew_3309 OstA family protein; cell envelope biogenesis YhbN 4406273 5664000 Spea_3614 Shewanella pealeana ATCC 700345 cell envelope biogenesis YhbN YP_001503462.1 4405734 D 398579 CDS YP_001503463.1 157963429 5664001 4406270..4407001 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_3310 ABC transporter-related protein; ABC transporter-like protein 4407001 5664001 Spea_3615 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503463.1 4406270 D 398579 CDS YP_001503464.1 157963430 5664002 4407138..4408601 1 NC_009901.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 4408601 5664002 Spea_3616 Shewanella pealeana ATCC 700345 RNA polymerase factor sigma-54 YP_001503464.1 4407138 D 398579 CDS YP_001503465.1 157963431 5664003 4408632..4408919 1 NC_009901.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: saz:Sama_3089 ribosomal subunit interface protein; sigma 54 modulation protein/30S ribosomal protein S30EA 4408919 5664003 Spea_3617 Shewanella pealeana ATCC 700345 sigma 54 modulation protein/30S ribosomal protein S30EA YP_001503465.1 4408632 D 398579 CDS YP_001503466.1 157963432 5664004 4408922..4409365 1 NC_009901.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: slo:Shew_3313 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 4409365 5664004 Spea_3618 Shewanella pealeana ATCC 700345 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001503466.1 4408922 D 398579 CDS YP_001503467.1 157963433 5664006 4410427..4410702 1 NC_009901.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: shw:Sputw3181_3462 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 4410702 5664006 Spea_3621 Shewanella pealeana ATCC 700345 phosphotransferase system, phosphocarrier protein HPr YP_001503467.1 4410427 D 398579 CDS YP_001503468.1 157963434 5664007 4410799..4412163 1 NC_009901.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: slo:Shew_3316 magnesium transporter; magnesium transporter 4412163 5664007 Spea_3622 Shewanella pealeana ATCC 700345 magnesium transporter YP_001503468.1 4410799 D 398579 CDS YP_001503469.1 157963435 5664008 complement(4412232..4413035) 1 NC_009901.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: slo:Shew_2687 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdate ABC transporter periplasmic molybdate-binding protein 4413035 5664008 Spea_3623 Shewanella pealeana ATCC 700345 molybdate ABC transporter periplasmic molybdate-binding protein YP_001503469.1 4412232 R 398579 CDS YP_001503470.1 157963436 5664009 complement(4413299..4413973) 1 NC_009901.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: slo:Shew_0908 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4413973 5664009 Spea_3624 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001503470.1 4413299 R 398579 CDS YP_001503471.1 157963437 5664010 4414420..4414641 1 NC_009901.1 KEGG: spc:Sputcn32_0707 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 4414641 5664010 Spea_3625 Shewanella pealeana ATCC 700345 transposase IS3/IS911 family protein YP_001503471.1 4414420 D 398579 CDS YP_001503472.1 157963438 5664011 complement(4414841..4416376) 1 NC_009901.1 KEGG: cps:CPS_0069 putative FG-GAP repeat lipoprotein; FG-GAP repeat-containing protein 4416376 5664011 Spea_3626 Shewanella pealeana ATCC 700345 FG-GAP repeat-containing protein YP_001503472.1 4414841 R 398579 CDS YP_001503473.1 157963439 5664012 complement(4416487..4416837) 1 NC_009901.1 PFAM: GtrA family protein; GtrA family protein 4416837 5664012 Spea_3627 Shewanella pealeana ATCC 700345 GtrA family protein YP_001503473.1 4416487 R 398579 CDS YP_001503474.1 157963440 5664013 complement(4416924..4418363) 1 NC_009901.1 PFAM: glycosyl transferase family 39; KEGG: vha:VIBHAR_02790 hypothetical protein; glycosyl transferase family protein 4418363 5664013 Spea_3628 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001503474.1 4416924 R 398579 CDS YP_001503475.1 157963441 5664014 complement(4418363..4419400) 1 NC_009901.1 PFAM: glycosyl transferase family 2; KEGG: vha:VIBHAR_02791 hypothetical protein; glycosyl transferase family protein 4419400 5664014 Spea_3629 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001503475.1 4418363 R 398579 CDS YP_001503476.1 157963442 5664015 4419509..4420210 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_3317 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4420210 5664015 Spea_3630 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001503476.1 4419509 D 398579 CDS YP_001503477.1 157963443 5664016 4420213..4421562 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_3318 integral membrane sensor signal transduction histidine kinase; histidine kinase 4421562 5664016 Spea_3631 Shewanella pealeana ATCC 700345 histidine kinase YP_001503477.1 4420213 D 398579 CDS YP_001503478.1 157963444 5664017 complement(4421588..4422163) 1 NC_009901.1 PFAM: Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: slo:Shew_3323 lipase-like; PGAP1 family protein 4422163 5664017 Spea_3632 Shewanella pealeana ATCC 700345 PGAP1 family protein YP_001503478.1 4421588 R 398579 CDS YP_001503479.1 157963445 5664018 4422365..4423417 1 NC_009901.1 KEGG: sbl:Sbal_2332 hypothetical protein; hypothetical protein 4423417 5664018 Spea_3633 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503479.1 4422365 D 398579 CDS YP_001503480.1 157963446 5664019 4424025..4425194 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: pha:PSHAa1259 transport protein of the major facilitator; major facilitator transporter 4425194 5664019 Spea_3634 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001503480.1 4424025 D 398579 CDS YP_001503481.1 157963447 5664020 4425503..4426579 1 NC_009901.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 4426579 rumB 5664020 rumB Shewanella pealeana ATCC 700345 23S rRNA methyluridine methyltransferase YP_001503481.1 4425503 D 398579 CDS YP_001503482.1 157963448 5664021 4426884..4427093 1 NC_009901.1 PFAM: TOBE domain protein; KEGG: slo:Shew_3338 TOBE domain protein; TOBE domain-containing protein 4427093 5664021 Spea_3636 Shewanella pealeana ATCC 700345 TOBE domain-containing protein YP_001503482.1 4426884 D 398579 CDS YP_001503483.1 157963449 5664022 complement(4427213..4427536) 1 NC_009901.1 hypothetical protein 4427536 5664022 Spea_3637 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503483.1 4427213 R 398579 CDS YP_001503484.1 157963450 5664023 complement(4427644..4428192) 1 NC_009901.1 KEGG: shw:Sputw3181_3482 hypothetical protein; hypothetical protein 4428192 5664023 Spea_3638 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503484.1 4427644 R 398579 CDS YP_001503485.1 157963451 5664024 complement(4428195..4428485) 1 NC_009901.1 PFAM: protein of unknown function DUF134; KEGG: shw:Sputw3181_3483 protein of unknown function DUF134; hypothetical protein 4428485 5664024 Spea_3639 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503485.1 4428195 R 398579 CDS YP_001503486.1 157963452 5664025 complement(4428728..4429324) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VF0677 putative dipeptide ABC transporter; ABC transporter-like protein 4429324 5664025 Spea_3640 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503486.1 4428728 R 398579 CDS YP_001503487.1 157963453 5664026 complement(4429308..4430015) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vfi:VF0678 oligopeptide transport ATP-binding protein OppD; ABC transporter-like protein 4430015 5664026 Spea_3641 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503487.1 4429308 R 398579 CDS YP_001503488.1 157963454 5664027 complement(4430009..4430839) 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vfi:VF0679 oligopeptide transport system permease protein OppC; binding-protein-dependent transport system inner membrane protein 4430839 5664027 Spea_3642 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001503488.1 4430009 R 398579 CDS YP_001503489.1 157963455 5664028 complement(4430832..4431809) 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aha:AHA_2519 ABC nickel/di-oligopepetide transporter, permease subunit; binding-protein-dependent transport system inner membrane protein 4431809 5664028 Spea_3643 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001503489.1 4430832 R 398579 CDS YP_001503490.1 157963456 5664029 complement(4431806..4433338) 1 NC_009901.1 PFAM: extracellular solute-binding protein family 5; KEGG: vfi:VF0681 oligopeptide-binding protein OppA; extracellular solute-binding protein 4433338 5664029 Spea_3644 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001503490.1 4431806 R 398579 CDS YP_001503491.1 157963457 5664030 4433525..4433935 1 NC_009901.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: ccv:CCV52592_1897 NikR C nickel binding domain family; CopG family transcriptional regulator 4433935 5664030 Spea_3645 Shewanella pealeana ATCC 700345 CopG family transcriptional regulator YP_001503491.1 4433525 D 398579 CDS YP_001503492.1 157963458 5664031 4434120..4434788 1 NC_009901.1 PFAM: protein of unknown function DUF1275; KEGG: mmw:Mmwyl1_2095 protein of unknown function DUF1275; hypothetical protein 4434788 5664031 Spea_3646 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503492.1 4434120 D 398579 CDS YP_001503493.1 157963459 5664032 complement(4434861..4435352) 1 NC_009901.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ppr:PBPRA1266 putative peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 4435352 5664032 Spea_3647 Shewanella pealeana ATCC 700345 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001503493.1 4434861 R 398579 CDS YP_001503494.1 157963460 5664033 4435713..4437098 1 NC_009901.1 PFAM: aminotransferase class V; KEGG: ppr:PBPRB0227 putative ScrA; class V aminotransferase 4437098 5664033 Spea_3648 Shewanella pealeana ATCC 700345 class V aminotransferase YP_001503494.1 4435713 D 398579 CDS YP_001503495.1 157963461 5664034 complement(4437204..4439573) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: ppr:PBPRB0229 hypothetical ScrC (sensory box/GGDEF familyprotein) (involved in swarmer cell regulation); diguanylate cyclase/phosphodiesterase 4439573 5664034 Spea_3649 Shewanella pealeana ATCC 700345 diguanylate cyclase/phosphodiesterase YP_001503495.1 4437204 R 398579 CDS YP_001503496.1 157963462 5664035 complement(4439560..4440486) 1 NC_009901.1 SMART: extracellular solute-binding protein family 3; KEGG: ppr:PBPRB0228 putative ScrB; extracellular solute-binding protein 4440486 5664035 Spea_3650 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001503496.1 4439560 R 398579 CDS YP_001503497.1 157963463 5664036 complement(4440929..4442098) 1 NC_009901.1 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 4442098 5664036 Spea_3651 Shewanella pealeana ATCC 700345 nitric oxide reductase YP_001503497.1 4440929 R 398579 CDS YP_001503498.1 157963464 5664037 complement(4442100..4443581) 1 NC_009901.1 detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 4443581 5664037 Spea_3652 Shewanella pealeana ATCC 700345 anaerobic nitric oxide reductase flavorubredoxin YP_001503498.1 4442100 R 398579 CDS YP_001503499.1 157963465 5664038 complement(4443930..4445042) 1 NC_009901.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 4445042 5664038 Spea_3653 Shewanella pealeana ATCC 700345 cysteine synthase A YP_001503499.1 4443930 R 398579 CDS YP_001503500.1 157963466 5664039 complement(4445229..4446464) 1 NC_009901.1 PFAM: aminotransferase class I and II; KEGG: pcr:Pcryo_0738 aminotransferase, class I and II; class I/II aminotransferase 4446464 5664039 Spea_3654 Shewanella pealeana ATCC 700345 class I/II aminotransferase YP_001503500.1 4445229 R 398579 CDS YP_001503501.1 157963467 5664040 complement(4446808..4448991) 1 NC_009901.1 PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; KEGG: son:SO_4085 chitinase A; glycoside hydrolase family protein 4448991 5664040 Spea_3655 Shewanella pealeana ATCC 700345 glycoside hydrolase family protein YP_001503501.1 4446808 R 398579 CDS YP_001503502.1 157963468 5664041 complement(4449202..4449489) 1 NC_009901.1 hypothetical protein 4449489 5664041 Spea_3656 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503502.1 4449202 R 398579 CDS YP_001503503.1 157963469 5664042 4449630..4449893 1 NC_009901.1 KEGG: vvy:VVA1355 hypothetical protein; hypothetical protein 4449893 5664042 Spea_3657 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503503.1 4449630 D 398579 CDS YP_001503504.1 157963470 5664043 4449890..4450921 1 NC_009901.1 KEGG: vvy:VVA1354 multidrug resistance efflux pump; multidrug resistance efflux pump 4450921 5664043 Spea_3658 Shewanella pealeana ATCC 700345 multidrug resistance efflux pump YP_001503504.1 4449890 D 398579 CDS YP_001503505.1 157963471 5664044 complement(4451017..4451697) 1 NC_009901.1 KEGG: shn:Shewana3_0129 response regulator receiver protein; response regulator receiver protein 4451697 5664044 Spea_3659 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001503505.1 4451017 R 398579 CDS YP_001503506.1 157963472 5664045 4451980..4452231 1 NC_009901.1 KEGG: slo:Shew_0491 hypothetical protein; hypothetical protein 4452231 5664045 Spea_3660 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503506.1 4451980 D 398579 CDS YP_001503507.1 157963473 5664046 complement(4452358..4453680) 1 NC_009901.1 KEGG: son:SO_1002 hypothetical protein; hypothetical protein 4453680 5664046 Spea_3661 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503507.1 4452358 R 398579 CDS YP_001503508.1 157963474 5664047 4454085..4455455 1 NC_009901.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: bha:BH0608 hypothetical protein; xanthine/uracil/vitamin C permease 4455455 5664047 Spea_3662 Shewanella pealeana ATCC 700345 xanthine/uracil/vitamin C permease YP_001503508.1 4454085 D 398579 CDS YP_001503509.1 157963475 5664048 complement(4455524..4457056) 1 NC_009901.1 PFAM: CBS domain containing protein; transporter-associated region; Integral membrane protein TerC; KEGG: aha:AHA_2651 inner membrane protein YoaE; integral membrane protein TerC 4457056 5664048 Spea_3663 Shewanella pealeana ATCC 700345 integral membrane protein TerC YP_001503509.1 4455524 R 398579 CDS YP_001503510.1 157963476 5664049 complement(4457438..4460005) 1 NC_009901.1 KEGG: pin:Ping_2564 PKD domain containing protein; hypothetical protein 4460005 5664049 Spea_3664 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503510.1 4457438 R 398579 CDS YP_001503511.1 157963477 5664050 complement(4460379..4461155) 1 NC_009901.1 KEGG: slo:Shew_0483 hypothetical protein; hypothetical protein 4461155 5664050 Spea_3665 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503511.1 4460379 R 398579 CDS YP_001503512.1 157963478 5664051 complement(4461179..4462345) 1 NC_009901.1 KEGG: slo:Shew_0482 hypothetical protein; hypothetical protein 4462345 5664051 Spea_3666 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503512.1 4461179 R 398579 CDS YP_001503513.1 157963479 5664052 complement(4462614..4465922) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; SMART: extracellular solute-binding protein family 3; metal-dependent phosphohydrolase HD region; KEGG: slo:Shew_3366 metal dependent phosphohydrolase; metal dependent phosphohydrolase 4465922 5664052 Spea_3667 Shewanella pealeana ATCC 700345 metal dependent phosphohydrolase YP_001503513.1 4462614 R 398579 CDS YP_001503514.1 157963480 5664053 4466206..4466487 1 NC_009901.1 PFAM: protein of unknown function DUF1255; KEGG: maq:Maqu_2862 protein of unknown function DUF1255; hypothetical protein 4466487 5664053 Spea_3668 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503514.1 4466206 D 398579 CDS YP_001503515.1 157963481 5664054 complement(4466598..4467002) 1 NC_009901.1 KEGG: slo:Shew_0481 hypothetical protein; hypothetical protein 4467002 5664054 Spea_3669 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503515.1 4466598 R 398579 CDS YP_001503516.1 157963482 5664055 complement(4467090..4467386) 1 NC_009901.1 KEGG: ecc:c5321 putative conserved protein; hypothetical protein 4467386 5664055 Spea_3670 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503516.1 4467090 R 398579 CDS YP_001503517.1 157963483 5664056 complement(4467837..4468493) 1 NC_009901.1 PFAM: pentapeptide repeat protein; KEGG: ppr:PBPRB0957 hypothetical protein; pentapeptide repeat-containing protein 4468493 5664056 Spea_3671 Shewanella pealeana ATCC 700345 pentapeptide repeat-containing protein YP_001503517.1 4467837 R 398579 CDS YP_001503518.1 157963484 5664057 4469014..4470873 1 NC_009901.1 PFAM: chemotaxis sensory transducer; KEGG: vfi:VF1138 TcpI, toxin-coregulated pilus biosynthesis gene; methyl-accepting chemotaxis sensory transducer 4470873 5664057 Spea_3672 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001503518.1 4469014 D 398579 CDS YP_001503519.1 157963485 5664058 4471189..4471545 1 NC_009901.1 hypothetical protein 4471545 5664058 Spea_3673 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503519.1 4471189 D 398579 CDS YP_001503520.1 157963486 5664059 complement(4471892..4473541) 1 NC_009901.1 PFAM: BCCT transporter; KEGG: vha:VIBHAR_06536 hypothetical protein; BCCT transporter 4473541 5664059 Spea_3674 Shewanella pealeana ATCC 700345 BCCT transporter YP_001503520.1 4471892 R 398579 CDS YP_001503521.1 157963487 5664060 complement(4473931..4474434) 1 NC_009901.1 KEGG: slo:Shew_2884 glycine cleavage system regulatory protein-like protein; glycine cleavage system regulatory protein-like protein 4474434 5664060 Spea_3675 Shewanella pealeana ATCC 700345 glycine cleavage system regulatory protein-like protein YP_001503521.1 4473931 R 398579 CDS YP_001503522.1 157963488 5664061 4475976..4478126 1 NC_009901.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: aha:AHA_0559 2',3'-cyclic-nucleotide 2'-phosphodiesterase; metallophosphoesterase 4478126 5664061 Spea_3676 Shewanella pealeana ATCC 700345 metallophosphoesterase YP_001503522.1 4475976 D 398579 CDS YP_001503523.1 157963489 5664062 complement(4478257..4479435) 1 NC_009901.1 KEGG: ppd:Ppro_2456 hypothetical protein; hypothetical protein 4479435 5664062 Spea_3677 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503523.1 4478257 R 398579 CDS YP_001503524.1 157963490 5664063 4479729..4480295 1 NC_009901.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: she:Shewmr4_3373 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 4480295 5664063 Spea_3678 Shewanella pealeana ATCC 700345 cold-shock DNA-binding domain-containing protein YP_001503524.1 4479729 D 398579 CDS YP_001503525.1 157963491 5664064 4480637..4481197 1 NC_009901.1 hypothetical protein 4481197 5664064 Spea_3679 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503525.1 4480637 D 398579 CDS YP_001503526.1 157963492 5664065 4481199..4481636 1 NC_009901.1 hypothetical protein 4481636 5664065 Spea_3680 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503526.1 4481199 D 398579 CDS YP_001503527.1 157963493 5664066 complement(4481991..4482962) 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_0135 protein of unknown function DUF1568; hypothetical protein 4482962 5664066 Spea_3681 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503527.1 4481991 R 398579 CDS YP_001503528.1 157963494 5664067 complement(4482999..4483595) 1 NC_009901.1 PFAM: protein of unknown function DUF1568; KEGG: sdn:Sden_0135 protein of unknown function DUF1568; hypothetical protein 4483595 5664067 Spea_3682 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503528.1 4482999 R 398579 CDS YP_001503529.1 157963495 5664068 4483910..4484209 1 NC_009901.1 hypothetical protein 4484209 5664068 Spea_3683 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503529.1 4483910 D 398579 CDS YP_001503530.1 157963496 5664069 complement(4484231..4484401) 1 NC_009901.1 KEGG: son:SO_0115 hypothetical protein; hypothetical protein 4484401 5664069 Spea_3684 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503530.1 4484231 R 398579 CDS YP_001503531.1 157963497 5664070 4484795..4485856 1 NC_009901.1 PFAM: NERD domain protein; KEGG: shn:Shewana3_0647 NERD domain protein; NERD domain-containing protein 4485856 5664070 Spea_3685 Shewanella pealeana ATCC 700345 NERD domain-containing protein YP_001503531.1 4484795 D 398579 CDS YP_001503532.1 157963498 5664071 4485983..4487062 1 NC_009901.1 KEGG: vfi:VF2039 hypothetical protein; hypothetical protein 4487062 5664071 Spea_3686 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503532.1 4485983 D 398579 CDS YP_001503533.1 157963499 5664072 4487059..4487409 1 NC_009901.1 KEGG: vfi:VF2040 hypothetical protein; hypothetical protein 4487409 5664072 Spea_3687 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503533.1 4487059 D 398579 CDS YP_001503534.1 157963500 5664073 4487609..4487944 1 NC_009901.1 hypothetical protein 4487944 5664073 Spea_3688 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503534.1 4487609 D 398579 CDS YP_001503535.1 157963501 5664074 complement(4488521..4490164) 1 NC_009901.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 4490164 groEL 5664074 groEL Shewanella pealeana ATCC 700345 chaperonin GroEL YP_001503535.1 4488521 R 398579 CDS YP_001503536.1 157963502 5664075 complement(4490254..4490544) 1 NC_009901.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 4490544 groES 5664075 groES Shewanella pealeana ATCC 700345 co-chaperonin GroES YP_001503536.1 4490254 R 398579 CDS YP_001503537.1 157963503 5664076 4490794..4492155 1 NC_009901.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: slo:Shew_0470 MATE efflux family protein; MATE efflux family protein 4492155 5664076 Spea_3691 Shewanella pealeana ATCC 700345 MATE efflux family protein YP_001503537.1 4490794 D 398579 CDS YP_001503538.1 157963504 5664077 4492257..4492913 1 NC_009901.1 PFAM: pentapeptide repeat protein; KEGG: slo:Shew_0469 pentapeptide repeat protein; pentapeptide repeat-containing protein 4492913 5664077 Spea_3692 Shewanella pealeana ATCC 700345 pentapeptide repeat-containing protein YP_001503538.1 4492257 D 398579 CDS YP_001503539.1 157963505 5664078 4493083..4493481 1 NC_009901.1 KEGG: slo:Shew_0465 hypothetical protein; hypothetical protein 4493481 5664078 Spea_3693 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503539.1 4493083 D 398579 CDS YP_001503540.1 157963506 5664079 complement(4493594..4494544) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_0468 transcriptional regulator, LysR family; LysR family transcriptional regulator 4494544 5664079 Spea_3694 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503540.1 4493594 R 398579 CDS YP_001503541.1 157963507 5664080 4494740..4495822 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_0467 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4495822 5664080 Spea_3695 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001503541.1 4494740 D 398579 CDS YP_001503542.1 157963508 5664081 4495885..4498962 1 NC_009901.1 PFAM: acriflavin resistance protein; KEGG: slo:Shew_0466 acriflavin resistance protein; acriflavin resistance protein 4498962 5664081 Spea_3696 Shewanella pealeana ATCC 700345 acriflavin resistance protein YP_001503542.1 4495885 D 398579 CDS YP_001503543.1 157963509 5664082 4499165..4499536 1 NC_009901.1 KEGG: slo:Shew_0464 hypothetical protein; hypothetical protein 4499536 5664082 Spea_3697 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503543.1 4499165 D 398579 CDS YP_001503544.1 157963510 5664083 4499588..4499941 1 NC_009901.1 KEGG: slo:Shew_0463 hypothetical protein; hypothetical protein 4499941 5664083 Spea_3698 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503544.1 4499588 D 398579 CDS YP_001503545.1 157963511 5664084 complement(4500018..4500335) 1 NC_009901.1 KEGG: slo:Shew_0462 hypothetical protein; hypothetical protein 4500335 5664084 Spea_3699 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503545.1 4500018 R 398579 CDS YP_001503546.1 157963512 5664085 complement(4500473..4500910) 1 NC_009901.1 KEGG: slo:Shew_3539 hypothetical protein; hypothetical protein 4500910 5664085 Spea_3700 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503546.1 4500473 R 398579 CDS YP_001503547.1 157963513 5664086 complement(4501060..4503465) 1 NC_009901.1 KEGG: slo:Shew_0460 hypothetical protein; hypothetical protein 4503465 5664086 Spea_3701 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503547.1 4501060 R 398579 CDS YP_001503548.1 157963514 5664087 complement(4503657..4507361) 1 NC_009901.1 KEGG: slo:Shew_0459 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor hybrid histidine kinase 4507361 5664087 Spea_3702 Shewanella pealeana ATCC 700345 PAS/PAC sensor hybrid histidine kinase YP_001503548.1 4503657 R 398579 CDS YP_001503549.1 157963515 5664088 complement(4507542..4508936) 1 NC_009901.1 PFAM: PhoH family protein; SMART: AAA ATPase; Nucleotide binding protein PINc; KEGG: slo:Shew_0458 PhoH family protein; PhoH family protein 4508936 5664088 Spea_3703 Shewanella pealeana ATCC 700345 PhoH family protein YP_001503549.1 4507542 R 398579 CDS YP_001503550.1 157963516 5664089 4509266..4512172 1 NC_009901.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 4512172 5664089 Spea_3704 Shewanella pealeana ATCC 700345 ATP-dependent helicase HepA YP_001503550.1 4509266 D 398579 CDS YP_001503551.1 157963517 5664090 4512299..4513237 1 NC_009901.1 KEGG: slo:Shew_0456 hypothetical protein; hypothetical protein 4513237 5664090 Spea_3705 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503551.1 4512299 D 398579 CDS YP_001503552.1 157963518 5664091 4513295..4513693 1 NC_009901.1 KEGG: mmw:Mmwyl1_3491 transposase; transposase 4513693 5664091 Spea_3706 Shewanella pealeana ATCC 700345 transposase YP_001503552.1 4513295 D 398579 CDS YP_001503553.1 157963519 5664092 4513777..4514529 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3340 integrase, catalytic region; integrase catalytic subunit 4514529 5664092 Spea_3707 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001503553.1 4513777 D 398579 CDS YP_001503554.1 157963520 5664093 complement(4514577..4515137) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0455 uncharacterized protein UPF0114; hypothetical protein 4515137 5664093 Spea_3708 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503554.1 4514577 R 398579 CDS YP_001503555.1 157963521 5664094 complement(4515241..4516047) 1 NC_009901.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 4516047 5664094 Spea_3709 Shewanella pealeana ATCC 700345 enoyl-CoA hydratase YP_001503555.1 4515241 R 398579 CDS YP_001503556.1 157963522 5664095 4516323..4517318 1 NC_009901.1 PFAM: response regulator receiver; KEGG: slo:Shew_0453 response regulator receiver protein; MCP methylation inhibitor CheC 4517318 5664095 Spea_3710 Shewanella pealeana ATCC 700345 MCP methylation inhibitor CheC YP_001503556.1 4516323 D 398579 CDS YP_001503557.1 157963523 5664096 4517320..4518282 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: slo:Shew_0452 diguanylate cyclase; diguanylate cyclase 4518282 5664096 Spea_3711 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503557.1 4517320 D 398579 CDS YP_001503558.1 157963524 5664097 complement(4518384..4518797) 1 NC_009901.1 PFAM: protein of unknown function DUF1260; KEGG: sfr:Sfri_3513 protein of unknown function DUF1260; hypothetical protein 4518797 5664097 Spea_3712 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503558.1 4518384 R 398579 CDS YP_001503559.1 157963525 5664098 complement(4518827..4519555) 1 NC_009901.1 KEGG: slo:Shew_0450 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 4519555 5664098 Spea_3713 Shewanella pealeana ATCC 700345 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001503559.1 4518827 R 398579 CDS YP_001503560.1 157963526 5664099 complement(4519808..4520599) 1 NC_009901.1 PFAM: ABC-3 protein; KEGG: sbm:Shew185_3797 ABC-3 protein; ABC-3 protein 4520599 5664099 Spea_3714 Shewanella pealeana ATCC 700345 ABC-3 protein YP_001503560.1 4519808 R 398579 CDS YP_001503561.1 157963527 5664100 complement(4520710..4521633) 1 NC_009901.1 PFAM: periplasmic solute binding protein; KEGG: shm:Shewmr7_3463 periplasmic solute binding protein; periplasmic solute-binding protein 4521633 5664100 Spea_3715 Shewanella pealeana ATCC 700345 periplasmic solute-binding protein YP_001503561.1 4520710 R 398579 CDS YP_001503562.1 157963528 5664101 complement(4521617..4522804) 1 NC_009901.1 KEGG: slo:Shew_0447 hypothetical protein; hypothetical protein 4522804 5664101 Spea_3716 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503562.1 4521617 R 398579 CDS YP_001503563.1 157963529 5664102 complement(4522881..4523162) 1 NC_009901.1 KEGG: sbm:Shew185_3800 hypothetical protein; hypothetical protein 4523162 5664102 Spea_3717 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503563.1 4522881 R 398579 CDS YP_001503564.1 157963530 5664103 complement(4523599..4523934) 1 NC_009901.1 KEGG: slo:Shew_0445 hypothetical protein; hypothetical protein 4523934 5664103 Spea_3718 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503564.1 4523599 R 398579 CDS YP_001503565.1 157963531 5664104 4524112..4525728 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: slo:Shew_0444 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 4525728 5664104 Spea_3719 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001503565.1 4524112 D 398579 CDS YP_001503566.1 157963532 5664105 complement(4525807..4527519) 1 NC_009901.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 4527519 5664105 Spea_3720 Shewanella pealeana ATCC 700345 formate--tetrahydrofolate ligase YP_001503566.1 4525807 R 398579 CDS YP_001503567.1 157963533 5664106 complement(4528026..4528892) 1 NC_009901.1 PFAM: MaoC domain protein dehydratase; KEGG: shn:Shewana3_0558 MaoC domain protein dehydratase; dehydratase 4528892 5664106 Spea_3721 Shewanella pealeana ATCC 700345 dehydratase YP_001503567.1 4528026 R 398579 CDS YP_001503568.1 157963534 5664107 complement(4528997..4529881) 1 NC_009901.1 PFAM: GumN family protein; KEGG: slo:Shew_0438 GumN family protein; GumN family protein 4529881 5664107 Spea_3722 Shewanella pealeana ATCC 700345 GumN family protein YP_001503568.1 4528997 R 398579 CDS YP_001503569.1 157963535 5664108 4529927..4530238 1 NC_009901.1 KEGG: slo:Shew_0437 hypothetical protein; hypothetical protein 4530238 5664108 Spea_3723 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503569.1 4529927 D 398579 CDS YP_001503570.1 157963536 5664109 4530343..4532085 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: shn:Shewana3_0554 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 4532085 5664109 Spea_3724 Shewanella pealeana ATCC 700345 diguanylate cyclase/phosphodiesterase YP_001503570.1 4530343 D 398579 CDS YP_001503571.1 157963537 5664110 complement(4532149..4532673) 1 NC_009901.1 KEGG: sbm:Shew185_3811 hypothetical protein; hypothetical protein 4532673 5664110 Spea_3725 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503571.1 4532149 R 398579 CDS YP_001503572.1 157963538 5664111 4532953..4533258 1 NC_009901.1 KEGG: slo:Shew_0434 hypothetical protein; hypothetical protein 4533258 5664111 Spea_3726 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503572.1 4532953 D 398579 CDS YP_001503573.1 157963539 5664112 4533559..4533867 1 NC_009901.1 KEGG: slo:Shew_0433 hypothetical protein; hypothetical protein 4533867 5664112 Spea_3727 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503573.1 4533559 D 398579 CDS YP_001503574.1 157963540 5664113 complement(4533981..4534490) 1 NC_009901.1 KEGG: sbm:Shew185_3814 hypothetical protein; hypothetical protein 4534490 5664113 Spea_3728 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503574.1 4533981 R 398579 CDS YP_001503575.1 157963541 5664114 4534657..4535052 1 NC_009901.1 KEGG: slo:Shew_0431 hypothetical protein; hypothetical protein 4535052 5664114 Spea_3729 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503575.1 4534657 D 398579 CDS YP_001503576.1 157963542 5664115 4535148..4535945 1 NC_009901.1 PFAM: response regulator receiver; KEGG: shw:Sputw3181_0617 response regulator receiver protein; response regulator receiver protein 4535945 5664115 Spea_3730 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001503576.1 4535148 D 398579 CDS YP_001503577.1 157963543 5664116 4536082..4536354 1 NC_009901.1 PFAM: histone family protein DNA-binding protein; KEGG: slo:Shew_0430 histone family protein DNA-binding protein; histone family protein DNA-binding protein 4536354 5664116 Spea_3731 Shewanella pealeana ATCC 700345 histone family protein DNA-binding protein YP_001503577.1 4536082 D 398579 CDS YP_001503578.1 157963544 5664117 4536602..4537294 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: she:Shewmr4_0547 hypothetical protein; hypothetical protein 4537294 5664117 Spea_3732 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503578.1 4536602 D 398579 CDS YP_001503579.1 157963545 5664118 4537627..4537806 1 NC_009901.1 KEGG: sbm:Shew185_3823 hypothetical protein; hypothetical protein 4537806 5664118 Spea_3733 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503579.1 4537627 D 398579 CDS YP_001503580.1 157963546 5664119 complement(4537898..4539277) 1 NC_009901.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: slo:Shew_0424 amino acid carrier protein; amino acid carrier protein 4539277 5664119 Spea_3734 Shewanella pealeana ATCC 700345 amino acid carrier protein YP_001503580.1 4537898 R 398579 CDS YP_001503581.1 157963547 5664120 complement(4539764..4540978) 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: shm:Shewmr7_3494 major facilitator superfamily MFS_1; major facilitator transporter 4540978 5664120 Spea_3735 Shewanella pealeana ATCC 700345 major facilitator transporter YP_001503581.1 4539764 R 398579 CDS YP_001503582.1 157963548 5664121 complement(4541128..4542141) 1 NC_009901.1 KEGG: spc:Sputcn32_3815 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 4542141 5664121 Spea_3736 Shewanella pealeana ATCC 700345 glyceraldehyde-3-phosphate dehydrogenase YP_001503582.1 4541128 R 398579 CDS YP_001503583.1 157963549 5664122 complement(4542253..4543290) 1 NC_009901.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: slo:Shew_0418 arsenical-resistance protein; arsenical-resistance protein 4543290 5664122 Spea_3737 Shewanella pealeana ATCC 700345 arsenical-resistance protein YP_001503583.1 4542253 R 398579 CDS YP_001503584.1 157963550 5664123 complement(4543336..4543686) 1 NC_009901.1 PFAM: regulatory protein ArsR; KEGG: shm:Shewmr7_3499 transcriptional regulator, ArsR family; ArsR family transcriptional regulator 4543686 5664123 Spea_3738 Shewanella pealeana ATCC 700345 ArsR family transcriptional regulator YP_001503584.1 4543336 R 398579 CDS YP_001503585.1 157963551 5664124 4543915..4545162 1 NC_009901.1 PFAM: PGAP1 family protein; KEGG: azo:azo0052 hypothetical secreted protein; PGAP1 family protein 4545162 5664124 Spea_3739 Shewanella pealeana ATCC 700345 PGAP1 family protein YP_001503585.1 4543915 D 398579 CDS YP_001503586.1 157963552 5664125 complement(4545683..4547065) 1 NC_009901.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sbm:Shew185_0512 peptidase U62 modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 4547065 5664125 Spea_3740 Shewanella pealeana ATCC 700345 peptidase U62 modulator of DNA gyrase YP_001503586.1 4545683 R 398579 CDS YP_001503587.1 157963553 5664126 4547231..4547773 1 NC_009901.1 PFAM: protein of unknown function DUF615; KEGG: slo:Shew_0415 protein of unknown function DUF615; hypothetical protein 4547773 5664126 Spea_3741 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503587.1 4547231 D 398579 CDS YP_001503588.1 157963554 5664127 4547931..4550486 1 NC_009901.1 PFAM: Ig domain protein group 1 domain protein; KEGG: sbl:Sbal_3807 Ig domain protein, group 1 domain protein; Ig domain-containing protein 4550486 5664127 Spea_3742 Shewanella pealeana ATCC 700345 Ig domain-containing protein YP_001503588.1 4547931 D 398579 CDS YP_001503589.1 157963555 5664128 complement(4551044..4552198) 1 NC_009901.1 PFAM: ABC-2 type transporter; KEGG: son:SO_4087 conserved hypothetical protein; ABC-2 type transporter 4552198 5664128 Spea_3743 Shewanella pealeana ATCC 700345 ABC-2 type transporter YP_001503589.1 4551044 R 398579 CDS YP_001503590.1 157963556 5664129 complement(4552200..4553363) 1 NC_009901.1 PFAM: ABC-2 type transporter; KEGG: she:Shewmr4_3462 ABC-2 type transporter; ABC-2 type transporter 4553363 5664129 Spea_3744 Shewanella pealeana ATCC 700345 ABC-2 type transporter YP_001503590.1 4552200 R 398579 CDS YP_001503591.1 157963557 5664130 complement(4553394..4554365) 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: shn:Shewana3_3639 secretion protein HlyD family protein; secretion protein HlyD family protein 4554365 5664130 Spea_3745 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001503591.1 4553394 R 398579 CDS YP_001503592.1 157963558 5664131 complement(4554355..4555746) 1 NC_009901.1 PFAM: outer membrane efflux protein; KEGG: slo:Shew_0411 outer membrane efflux protein; outer membrane efflux protein 4555746 5664131 Spea_3746 Shewanella pealeana ATCC 700345 outer membrane efflux protein YP_001503592.1 4554355 R 398579 CDS YP_001503593.1 157963559 5664132 complement(4555864..4557345) 1 NC_009901.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: slo:Shew_0410 peptidase U62, modulator of DNA gyrase; peptidase U62 modulator of DNA gyrase 4557345 5664132 Spea_3747 Shewanella pealeana ATCC 700345 peptidase U62 modulator of DNA gyrase YP_001503593.1 4555864 R 398579 CDS YP_001503594.1 157963560 5664133 complement(4557422..4558261) 1 NC_009901.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: spc:Sputcn32_0580 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 4558261 5664133 Spea_3748 Shewanella pealeana ATCC 700345 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001503594.1 4557422 R 398579 CDS YP_001503595.1 157963561 5664134 complement(4558185..4562504) 1 NC_009901.1 KEGG: slo:Shew_0408 hypothetical protein; hypothetical protein 4562504 5664134 Spea_3749 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503595.1 4558185 R 398579 CDS YP_001503596.1 157963562 5664135 complement(4562504..4564012) 1 NC_009901.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 4564012 5664135 Spea_3750 Shewanella pealeana ATCC 700345 ribonuclease G YP_001503596.1 4562504 R 398579 CDS YP_001503597.1 157963563 5664136 complement(4564171..4564767) 1 NC_009901.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: slo:Shew_0406 maf protein; maf protein 4564767 5664136 Spea_3751 Shewanella pealeana ATCC 700345 maf protein YP_001503597.1 4564171 R 398579 CDS YP_001503598.1 157963564 5664137 complement(4564847..4565335) 1 NC_009901.1 PFAM: Rod shape-determining protein MreD; KEGG: slo:Shew_0405 rod shape-determining protein MreD; rod shape-determining protein MreD 4565335 5664137 Spea_3752 Shewanella pealeana ATCC 700345 rod shape-determining protein MreD YP_001503598.1 4564847 R 398579 CDS YP_001503599.1 157963565 5664138 complement(4565332..4566219) 1 NC_009901.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 4566219 5664138 Spea_3753 Shewanella pealeana ATCC 700345 rod shape-determining protein MreC YP_001503599.1 4565332 R 398579 CDS YP_001503600.1 157963566 5664139 complement(4566261..4567310) 1 NC_009901.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 4567310 5664139 Spea_3754 Shewanella pealeana ATCC 700345 rod shape-determining protein MreB YP_001503600.1 4566261 R 398579 CDS YP_001503601.1 157963567 5664140 complement(4567483..4571631) 1 NC_009901.1 SMART: PA14-related domain protein; KEGG: slo:Shew_0402 MSHA biogenesis protein MshQ; PA14 domain-containing protein 4571631 5664140 Spea_3755 Shewanella pealeana ATCC 700345 PA14 domain-containing protein YP_001503601.1 4567483 R 398579 CDS YP_001503602.1 157963568 5664141 complement(4571624..4572124) 1 NC_009901.1 KEGG: slo:Shew_0401 MSHA biogenesis protein MshP; MSHA biogenesis protein MshP 4572124 5664141 Spea_3756 Shewanella pealeana ATCC 700345 MSHA biogenesis protein MshP YP_001503602.1 4571624 R 398579 CDS YP_001503603.1 157963569 5664142 complement(4572114..4573001) 1 NC_009901.1 KEGG: slo:Shew_0400 methylation site containing protein; methylation site containing protein 4573001 5664142 Spea_3757 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001503603.1 4572114 R 398579 CDS YP_001503604.1 157963570 5664143 complement(4573001..4573576) 1 NC_009901.1 KEGG: shw:Sputw3181_3602 methylation site containing protein; methylation site containing protein 4573576 5664143 Spea_3758 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001503604.1 4573001 R 398579 CDS YP_001503605.1 157963571 5664144 complement(4573563..4574039) 1 NC_009901.1 KEGG: spc:Sputcn32_0569 MSHA pilin protein MshC; MSHA pilin protein MshC 4574039 5664144 Spea_3759 Shewanella pealeana ATCC 700345 MSHA pilin protein MshC YP_001503605.1 4573563 R 398579 CDS YP_001503606.1 157963572 5664145 complement(4574362..4574892) 1 NC_009901.1 KEGG: shm:Shewmr7_0473 methylation site containing protein; methylation site containing protein 4574892 5664145 Spea_3760 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001503606.1 4574362 R 398579 CDS YP_001503607.1 157963573 5664146 complement(4574913..4575449) 1 NC_009901.1 KEGG: son:SO_4105 MSHA pilin protein MshA; MSHA pilin protein MshA 4575449 5664146 Spea_3761 Shewanella pealeana ATCC 700345 MSHA pilin protein MshA YP_001503607.1 4574913 R 398579 CDS YP_001503608.1 157963574 5664147 complement(4575587..4576195) 1 NC_009901.1 KEGG: shn:Shewana3_3657 methylation site containing protein; methylation site containing protein 4576195 5664147 Spea_3762 Shewanella pealeana ATCC 700345 methylation site containing protein YP_001503608.1 4575587 R 398579 CDS YP_001503609.1 157963575 5664148 complement(4576275..4576766) 1 NC_009901.1 KEGG: shn:Shewana3_3658 hypothetical protein; hypothetical protein 4576766 5664148 Spea_3763 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503609.1 4576275 R 398579 CDS YP_001503610.1 157963576 5664149 complement(4576785..4578005) 1 NC_009901.1 PFAM: type II secretion system protein; KEGG: shw:Sputw3181_3608 type II secretion system protein; type II secretion system protein 4578005 5664149 Spea_3764 Shewanella pealeana ATCC 700345 type II secretion system protein YP_001503610.1 4576785 R 398579 CDS YP_001503611.1 157963577 5664150 complement(4578008..4579741) 1 NC_009901.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: slo:Shew_0392 type II secretion system protein E; type II secretion system protein E 4579741 5664150 Spea_3765 Shewanella pealeana ATCC 700345 type II secretion system protein E YP_001503611.1 4578008 R 398579 CDS YP_001503612.1 157963578 5664151 complement(4579741..4581027) 1 NC_009901.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: she:Shewmr4_3484 tetratricopeptide TPR_2 repeat protein; hypothetical protein 4581027 5664151 Spea_3766 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503612.1 4579741 R 398579 CDS YP_001503613.1 157963579 5664152 complement(4581024..4581932) 1 NC_009901.1 KEGG: sbm:Shew185_0485 MSHA biogenesis protein MshM; MSHA biogenesis protein MshM 4581932 5664152 Spea_3767 Shewanella pealeana ATCC 700345 MSHA biogenesis protein MshM YP_001503613.1 4581024 R 398579 CDS YP_001503614.1 157963580 5664153 complement(4581935..4583605) 1 NC_009901.1 TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB short domain; KEGG: slo:Shew_0389 pilus (MSHA type) biogenesis protein MshL; pilus (MSHA type) biogenesis protein MshL 4583605 5664153 Spea_3768 Shewanella pealeana ATCC 700345 pilus (MSHA type) biogenesis protein MshL YP_001503614.1 4581935 R 398579 CDS YP_001503615.1 157963581 5664154 complement(4583607..4583945) 1 NC_009901.1 KEGG: shn:Shewana3_3664 MSHA biogenesis protein MshK; hypothetical protein 4583945 5664154 Spea_3769 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503615.1 4583607 R 398579 CDS YP_001503616.1 157963582 5664155 complement(4583926..4584582) 1 NC_009901.1 KEGG: slo:Shew_0387 MSHA biogenesis protein MshJ; MSHA biogenesis protein MshJ 4584582 5664155 Spea_3770 Shewanella pealeana ATCC 700345 MSHA biogenesis protein MshJ YP_001503616.1 4583926 R 398579 CDS YP_001503617.1 157963583 5664156 complement(4584579..4585187) 1 NC_009901.1 PFAM: Fimbrial assembly family protein; KEGG: slo:Shew_0386 fimbrial assembly family protein; fimbrial assembly family protein 4585187 5664156 Spea_3771 Shewanella pealeana ATCC 700345 fimbrial assembly family protein YP_001503617.1 4584579 R 398579 CDS YP_001503618.1 157963584 5664157 complement(4585184..4586065) 1 NC_009901.1 KEGG: sbm:Shew185_0480 conserved hypothetical biogenesis protein MshI; biogenesis protein MshI 4586065 5664157 Spea_3772 Shewanella pealeana ATCC 700345 biogenesis protein MshI YP_001503618.1 4585184 R 398579 CDS YP_001503619.1 157963585 5664158 complement(4586457..4588364) 1 NC_009901.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 4588364 5664158 Spea_3773 Shewanella pealeana ATCC 700345 regulatory protein CsrD YP_001503619.1 4586457 R 398579 CDS YP_001503620.1 157963586 5664159 complement(4588590..4589840) 1 NC_009901.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: slo:Shew_0383 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); malate dehydrogenase 4589840 5664159 Spea_3774 Shewanella pealeana ATCC 700345 malate dehydrogenase YP_001503620.1 4588590 R 398579 CDS YP_001503621.1 157963587 5664160 complement(4590045..4590818) 1 NC_009901.1 PFAM: nuclease (SNase domain protein); KEGG: slo:Shew_0382 nuclease (SNase domain protein); nuclease 4590818 5664160 Spea_3775 Shewanella pealeana ATCC 700345 nuclease YP_001503621.1 4590045 R 398579 CDS YP_001503622.1 157963588 5664161 complement(4591015..4591227) 1 NC_009901.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 4591227 rpmE 5664161 rpmE Shewanella pealeana ATCC 700345 50S ribosomal protein L31 YP_001503622.1 4591015 R 398579 CDS YP_001503623.1 157963589 5664162 complement(4591447..4592175) 1 NC_009901.1 KEGG: slo:Shew_0380 hypothetical protein; hypothetical protein 4592175 5664162 Spea_3777 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503623.1 4591447 R 398579 CDS YP_001503624.1 157963590 5664163 4592443..4594638 1 NC_009901.1 KEGG: slo:Shew_0379 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; primosomal protein N' 4594638 5664163 Spea_3778 Shewanella pealeana ATCC 700345 primosomal protein N' YP_001503624.1 4592443 D 398579 CDS YP_001503625.1 157963591 5664164 4594763..4596508 1 NC_009901.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 4596508 argS 5664164 argS Shewanella pealeana ATCC 700345 arginyl-tRNA synthetase YP_001503625.1 4594763 D 398579 CDS YP_001503626.1 157963592 5664165 4596519..4597094 1 NC_009901.1 PFAM: Sporulation domain protein; KEGG: slo:Shew_0377 sporulation domain protein; sporulation domain-containing protein 4597094 5664165 Spea_3780 Shewanella pealeana ATCC 700345 sporulation domain-containing protein YP_001503626.1 4596519 D 398579 CDS YP_001503627.1 157963593 5664166 4597245..4597769 1 NC_009901.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 4597769 5664166 Spea_3781 Shewanella pealeana ATCC 700345 ATP-dependent protease peptidase subunit YP_001503627.1 4597245 D 398579 CDS YP_001503628.1 157963594 5664167 4597819..4599144 1 NC_009901.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 4599144 hslU 5664167 hslU Shewanella pealeana ATCC 700345 ATP-dependent protease ATP-binding subunit HslU YP_001503628.1 4597819 D 398579 CDS YP_001503629.1 157963595 5664168 4599274..4599669 1 NC_009901.1 PFAM: protein of unknown function DUF971; KEGG: slo:Shew_0373 protein of unknown function DUF971; hypothetical protein 4599669 5664168 Spea_3783 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503629.1 4599274 D 398579 CDS YP_001503630.1 157963596 5664169 4599888..4600592 1 NC_009901.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 4600592 5664169 Spea_3784 Shewanella pealeana ATCC 700345 purine nucleoside phosphorylase YP_001503630.1 4599888 D 398579 CDS YP_001503631.1 157963597 5664170 4600689..4601861 1 NC_009901.1 PFAM: major facilitator superfamily MFS_1; KEGG: shn:Shewana3_2502 major facilitator superfamily MFS_1; hypothetical protein 4601861 5664170 Spea_3785 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503631.1 4600689 D 398579 CDS YP_001503632.1 157963598 5664171 complement(4602071..4602742) 1 NC_009901.1 PFAM: cyclic nucleotide-binding; KEGG: shn:Shewana3_2501 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 4602742 5664171 Spea_3786 Shewanella pealeana ATCC 700345 cyclic nucleotide-binding protein YP_001503632.1 4602071 R 398579 CDS YP_001503633.1 157963599 5664172 complement(4602924..4603979) 1 NC_009901.1 KEGG: sbm:Shew185_0424 hypothetical protein; hypothetical protein 4603979 5664172 Spea_3787 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503633.1 4602924 R 398579 CDS YP_001503634.1 157963600 5664173 complement(4603988..4604497) 1 NC_009901.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: shn:Shewana3_3721 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 4604497 5664173 Spea_3788 Shewanella pealeana ATCC 700345 PA-phosphatase-like phosphoesterase YP_001503634.1 4603988 R 398579 CDS YP_001503635.1 157963601 5664174 complement(4604704..4604955) 1 NC_009901.1 KEGG: slo:Shew_3369 hypothetical protein; hypothetical protein 4604955 5664174 Spea_3789 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503635.1 4604704 R 398579 CDS YP_001503636.1 157963602 5664175 4605294..4605779 1 NC_009901.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 4605779 5664175 Spea_3790 Shewanella pealeana ATCC 700345 ribonuclease activity regulator protein RraA YP_001503636.1 4605294 D 398579 CDS YP_001503637.1 157963603 5664176 4605923..4606957 1 NC_009901.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: slo:Shew_3372 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 4606957 5664176 Spea_3791 Shewanella pealeana ATCC 700345 arginase/agmatinase/formiminoglutamase YP_001503637.1 4605923 D 398579 CDS YP_001503638.1 157963604 5664177 4607161..4607916 1 NC_009901.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: slo:Shew_3373 ubiquinone/menaquinone biosynthesis methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase 4607916 5664177 Spea_3792 Shewanella pealeana ATCC 700345 ubiquinone/menaquinone biosynthesis methyltransferase YP_001503638.1 4607161 D 398579 CDS YP_001503639.1 157963605 5664178 4607928..4608551 1 NC_009901.1 PFAM: Sterol-binding domain protein; KEGG: slo:Shew_3374 protein of unknown function DUF1243; sterol-binding domain-containing protein 4608551 5664178 Spea_3793 Shewanella pealeana ATCC 700345 sterol-binding domain-containing protein YP_001503639.1 4607928 D 398579 CDS YP_001503640.1 157963606 5664179 4608548..4610197 1 NC_009901.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: slo:Shew_3375 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 4610197 5664179 Spea_3794 Shewanella pealeana ATCC 700345 2-polyprenylphenol 6-hydroxylase YP_001503640.1 4608548 D 398579 CDS YP_001503641.1 157963607 5664180 4610258..4610527 1 NC_009901.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: slo:Shew_3376 twin-arginine translocation protein, TatA/E family subunit; twin arginine-targeting protein translocase 4610527 5664180 Spea_3795 Shewanella pealeana ATCC 700345 twin arginine-targeting protein translocase YP_001503641.1 4610258 D 398579 CDS YP_001503642.1 157963608 5664181 4610534..4610929 1 NC_009901.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: slo:Shew_3377 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 4610929 5664181 Spea_3796 Shewanella pealeana ATCC 700345 twin-arginine translocation protein subunit TatB YP_001503642.1 4610534 D 398579 CDS YP_001503643.1 157963609 5664182 4610933..4611694 1 NC_009901.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: slo:Shew_3378 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 4611694 5664182 Spea_3797 Shewanella pealeana ATCC 700345 Sec-independent protein translocase subunit TatC YP_001503643.1 4610933 D 398579 CDS YP_001503644.1 157963610 5664183 4611885..4612388 1 NC_009901.1 KEGG: shm:Shewmr7_0399 hypothetical protein; hypothetical protein 4612388 5664183 Spea_3798 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503644.1 4611885 D 398579 CDS YP_001503645.1 157963611 5664184 4612388..4613182 1 NC_009901.1 PFAM: TatD-related deoxyribonuclease; KEGG: shm:Shewmr7_0398 TatD-related deoxyribonuclease; TatD-like deoxyribonuclease 4613182 5664184 Spea_3799 Shewanella pealeana ATCC 700345 TatD-like deoxyribonuclease YP_001503645.1 4612388 D 398579 CDS YP_001503646.1 157963612 5664185 4613182..4615047 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; KEGG: slo:Shew_3381 diguanylate cyclase; diguanylate cyclase 4615047 5664185 Spea_3800 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503646.1 4613182 D 398579 CDS YP_001503647.1 157963613 5664186 4615072..4616082 1 NC_009901.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 4616082 5664186 Spea_3801 Shewanella pealeana ATCC 700345 delta-aminolevulinic acid dehydratase YP_001503647.1 4615072 D 398579 CDS YP_001503648.1 157963614 5664835 complement(4623827..4626550) 1 NC_009901.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 4626550 5664835 Spea_3803 Shewanella pealeana ATCC 700345 preprotein translocase subunit SecA YP_001503648.1 4623827 R 398579 CDS YP_001503649.1 157963615 5664188 complement(4626611..4627510) 1 NC_009901.1 PFAM: peptidase M23B; KEGG: slo:Shew_3446 peptidase M23B; peptidase M23B 4627510 5664188 Spea_3804 Shewanella pealeana ATCC 700345 peptidase M23B YP_001503649.1 4626611 R 398579 CDS YP_001503650.1 157963616 5664189 4627538..4627990 1 NC_009901.1 KEGG: slo:Shew_3447 hypothetical protein; hypothetical protein 4627990 5664189 Spea_3805 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503650.1 4627538 D 398579 CDS YP_001503651.1 157963617 5664190 complement(4627998..4628918) 1 NC_009901.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4628918 lpxC 5664190 lpxC Shewanella pealeana ATCC 700345 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001503651.1 4627998 R 398579 CDS YP_001503652.1 157963618 5664191 complement(4629096..4630283) 1 NC_009901.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 4630283 5664191 Spea_3807 Shewanella pealeana ATCC 700345 cell division protein FtsZ YP_001503652.1 4629096 R 398579 CDS YP_001503653.1 157963619 5664192 complement(4630315..4631550) 1 NC_009901.1 PFAM: cell division protein FtsA; KEGG: slo:Shew_3450 cell division protein FtsA; cell division protein FtsA 4631550 5664192 Spea_3808 Shewanella pealeana ATCC 700345 cell division protein FtsA YP_001503653.1 4630315 R 398579 CDS YP_001503654.1 157963620 5664193 complement(4631554..4632342) 1 NC_009901.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: slo:Shew_3451 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 4632342 5664193 Spea_3809 Shewanella pealeana ATCC 700345 polypeptide-transport-associated domain-containing protein YP_001503654.1 4631554 R 398579 CDS YP_001503655.1 157963621 5664194 complement(4632424..4633893) 1 NC_009901.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 4633893 murC 5664194 murC Shewanella pealeana ATCC 700345 UDP-N-acetylmuramate--L-alanine ligase YP_001503655.1 4632424 R 398579 CDS YP_001503656.1 157963622 5664195 complement(4633895..4634992) 1 NC_009901.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 4634992 murG 5664195 murG Shewanella pealeana ATCC 700345 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001503656.1 4633895 R 398579 CDS YP_001503657.1 157963623 5664196 complement(4635004..4636221) 1 NC_009901.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: slo:Shew_3454 cell division protein FtsW; cell division protein FtsW 4636221 5664196 Spea_3812 Shewanella pealeana ATCC 700345 cell division protein FtsW YP_001503657.1 4635004 R 398579 CDS YP_001503658.1 157963624 5664197 complement(4636211..4637530) 1 NC_009901.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 4637530 murD 5664197 murD Shewanella pealeana ATCC 700345 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001503658.1 4636211 R 398579 CDS YP_001503659.1 157963625 5664198 complement(4637581..4638663) 1 NC_009901.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 4638663 mraY 5664198 mraY Shewanella pealeana ATCC 700345 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001503659.1 4637581 R 398579 CDS YP_001503660.1 157963626 5664199 complement(4638663..4640042) 1 NC_009901.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: son:SO_4223 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 4640042 5664199 Spea_3815 Shewanella pealeana ATCC 700345 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001503660.1 4638663 R 398579 CDS YP_001503661.1 157963627 5664200 complement(4640039..4641505) 1 NC_009901.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 4641505 murE 5664200 murE Shewanella pealeana ATCC 700345 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001503661.1 4640039 R 398579 CDS YP_001503662.1 157963628 5664201 complement(4641505..4643241) 1 NC_009901.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: slo:Shew_3459 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 4643241 5664201 Spea_3817 Shewanella pealeana ATCC 700345 peptidoglycan glycosyltransferase YP_001503662.1 4641505 R 398579 CDS YP_001503663.1 157963629 5664202 complement(4643238..4643552) 1 NC_009901.1 PFAM: cell division protein FtsL; KEGG: slo:Shew_3460 cell division protein FtsL; cell division protein FtsL 4643552 5664202 Spea_3818 Shewanella pealeana ATCC 700345 cell division protein FtsL YP_001503663.1 4643238 R 398579 CDS YP_001503664.1 157963630 5664203 complement(4643569..4644516) 1 NC_009901.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: slo:Shew_3461 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 4644516 mraW 5664203 mraW Shewanella pealeana ATCC 700345 S-adenosyl-methyltransferase MraW YP_001503664.1 4643569 R 398579 CDS YP_001503665.1 157963631 5664204 complement(4644547..4645005) 1 NC_009901.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 4645005 5664204 Spea_3820 Shewanella pealeana ATCC 700345 cell division protein MraZ YP_001503665.1 4644547 R 398579 CDS YP_001503666.1 157963632 5664205 4645522..4645866 1 NC_009901.1 KEGG: slo:Shew_3465 hypothetical protein; hypothetical protein 4645866 5664205 Spea_3821 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503666.1 4645522 D 398579 CDS YP_001503667.1 157963633 5664206 complement(4645886..4647367) 1 NC_009901.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: slo:Shew_3466 glycerol kinase; glycerol kinase 4647367 5664206 Spea_3822 Shewanella pealeana ATCC 700345 glycerol kinase YP_001503667.1 4645886 R 398579 CDS YP_001503668.1 157963634 5664207 complement(4647380..4647913) 1 NC_009901.1 KEGG: slo:Shew_3467 hypothetical protein; hypothetical protein 4647913 5664207 Spea_3823 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503668.1 4647380 R 398579 CDS YP_001503669.1 157963635 5664208 complement(4648523..4649809) 1 NC_009901.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO_4232 long-chain fatty acid transport protein; aromatic hydrocarbon degradation membrane protein 4649809 5664208 Spea_3824 Shewanella pealeana ATCC 700345 aromatic hydrocarbon degradation membrane protein YP_001503669.1 4648523 R 398579 CDS YP_001503670.1 157963636 5664209 complement(4650323..4650928) 1 NC_009901.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 4650928 leuD 5664209 leuD Shewanella pealeana ATCC 700345 isopropylmalate isomerase small subunit YP_001503670.1 4650323 R 398579 CDS YP_001503671.1 157963637 5664210 complement(4650938..4652338) 1 NC_009901.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 4652338 5664210 Spea_3826 Shewanella pealeana ATCC 700345 isopropylmalate isomerase large subunit YP_001503671.1 4650938 R 398579 CDS YP_001503672.1 157963638 5664211 complement(4652341..4653435) 1 NC_009901.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 4653435 5664211 Spea_3827 Shewanella pealeana ATCC 700345 3-isopropylmalate dehydrogenase YP_001503672.1 4652341 R 398579 CDS YP_001503673.1 157963639 5664212 complement(4653521..4655092) 1 NC_009901.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 4655092 5664212 Spea_3828 Shewanella pealeana ATCC 700345 2-isopropylmalate synthase YP_001503673.1 4653521 R 398579 CDS YP_001503674.1 157963640 5664213 4655617..4657407 1 NC_009901.1 KEGG: sbl:Sbal_0385 response regulator receiver protein; response regulator receiver protein 4657407 5664213 Spea_3829 Shewanella pealeana ATCC 700345 response regulator receiver protein YP_001503674.1 4655617 D 398579 CDS YP_001503675.1 157963641 5664214 complement(4657473..4659296) 1 NC_009901.1 KEGG: shw:Sputw3181_0372 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases; ATP-dependent DNA helicase RecQ 4659296 5664214 Spea_3830 Shewanella pealeana ATCC 700345 ATP-dependent DNA helicase RecQ YP_001503675.1 4657473 R 398579 CDS YP_001503676.1 157963642 5664215 4659468..4659932 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: son:SO_4242 hypothetical protein; hypothetical protein 4659932 5664215 Spea_3831 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503676.1 4659468 D 398579 CDS YP_001503677.1 157963643 5664216 4660109..4660996 1 NC_009901.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbl:Sbal_0382 RarD protein, DMT superfamily transporter; transporter DMT superfamily protein 4660996 5664216 Spea_3832 Shewanella pealeana ATCC 700345 transporter DMT superfamily protein YP_001503677.1 4660109 D 398579 CDS YP_001503678.1 157963644 5664217 complement(4661049..4661561) 1 NC_009901.1 KEGG: shw:Sputw3181_0369 hypothetical protein; hypothetical protein 4661561 5664217 Spea_3833 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503678.1 4661049 R 398579 CDS YP_001503679.1 157963645 5664218 complement(4661631..4662953) 1 NC_009901.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 4662953 5664218 Spea_3834 Shewanella pealeana ATCC 700345 N-acetylglutamate synthase YP_001503679.1 4661631 R 398579 CDS YP_001503680.1 157963646 5664219 complement(4663527..4663700) 1 NC_009901.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 4663700 rpmG 5664219 rpmG Shewanella pealeana ATCC 700345 50S ribosomal protein L33 YP_001503680.1 4663527 R 398579 CDS YP_001503681.1 157963647 5664220 complement(4663707..4663943) 1 NC_009901.1 required for 70S ribosome assembly; 50S ribosomal protein L28 4663943 rpmB 5664220 rpmB Shewanella pealeana ATCC 700345 50S ribosomal protein L28 YP_001503681.1 4663707 R 398579 CDS YP_001503682.1 157963648 5664221 complement(4664069..4664746) 1 NC_009901.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 4664746 radC 5664221 radC Shewanella pealeana ATCC 700345 DNA repair protein RadC YP_001503682.1 4664069 R 398579 CDS YP_001503683.1 157963649 5664222 4664896..4666089 1 NC_009901.1 KEGG: sfr:Sfri_3829 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 4666089 5664222 Spea_3838 Shewanella pealeana ATCC 700345 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001503683.1 4664896 D 398579 CDS YP_001503684.1 157963650 5664223 4666089..4666547 1 NC_009901.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 4666547 dut 5664223 dut Shewanella pealeana ATCC 700345 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001503684.1 4666089 D 398579 CDS YP_001503685.1 157963651 5664224 4666647..4667240 1 NC_009901.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 4667240 slmA 5664224 slmA Shewanella pealeana ATCC 700345 nucleoid occlusion protein YP_001503685.1 4666647 D 398579 CDS YP_001503686.1 157963652 5664225 4667377..4669341 1 NC_009901.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: slo:Shew_3485 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 4669341 5664225 Spea_3841 Shewanella pealeana ATCC 700345 peptidase S9 prolyl oligopeptidase YP_001503686.1 4667377 D 398579 CDS YP_001503687.1 157963653 5664226 4669611..4670270 1 NC_009901.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 4670270 folE 5664226 folE Shewanella pealeana ATCC 700345 GTP cyclohydrolase I YP_001503687.1 4669611 D 398579 CDS YP_001503688.1 157963654 5664227 complement(4670794..4671435) 1 NC_009901.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 4671435 pyrE 5664227 pyrE Shewanella pealeana ATCC 700345 orotate phosphoribosyltransferase YP_001503688.1 4670794 R 398579 CDS YP_001503689.1 157963655 5664228 complement(4671555..4672268) 1 NC_009901.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 4672268 rph 5664228 rph Shewanella pealeana ATCC 700345 ribonuclease PH YP_001503689.1 4671555 R 398579 CDS YP_001503690.1 157963656 5664229 4672541..4673404 1 NC_009901.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: slo:Shew_3489 YicC N-terminal domain protein; hypothetical protein 4673404 5664229 Spea_3845 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503690.1 4672541 D 398579 CDS YP_001503691.1 157963657 5664230 complement(4673505..4674824) 1 NC_009901.1 PFAM: HipA domain protein; KEGG: sdn:Sden_0307 HipA-like protein; HipA domain-containing protein 4674824 5664230 Spea_3846 Shewanella pealeana ATCC 700345 HipA domain-containing protein YP_001503691.1 4673505 R 398579 CDS YP_001503692.1 157963658 5664231 complement(4674824..4675105) 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: sbm:Shew185_0365 helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4675105 5664231 Spea_3847 Shewanella pealeana ATCC 700345 helix-turn-helix domain-containing protein YP_001503692.1 4674824 R 398579 CDS YP_001503693.1 157963659 5664232 4675467..4675730 1 NC_009901.1 PFAM: domain of unknown function DUF1732; KEGG: slo:Shew_3489 YicC N-terminal domain protein; hypothetical protein 4675730 5664232 Spea_3848 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503693.1 4675467 D 398579 CDS YP_001503694.1 157963660 5664233 complement(4675864..4677174) 1 NC_009901.1 KEGG: xcb:XC_3913 hypothetical protein; hypothetical protein 4677174 5664233 Spea_3849 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503694.1 4675864 R 398579 CDS YP_001503695.1 157963661 5664234 4677747..4678586 1 NC_009901.1 PFAM: purine or other phosphorylase family 1; KEGG: son:SO_3705 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase, putative; purine phosphorylase family 1 4678586 5664234 Spea_3850 Shewanella pealeana ATCC 700345 purine phosphorylase family 1 YP_001503695.1 4677747 D 398579 CDS YP_001503696.1 157963662 5664235 4678747..4680015 1 NC_009901.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: son:SO_3706 NupC family protein; nucleoside transporter 4680015 5664235 Spea_3851 Shewanella pealeana ATCC 700345 nucleoside transporter YP_001503696.1 4678747 D 398579 CDS YP_001503697.1 157963663 5664236 complement(4680141..4683110) 1 NC_009901.1 KEGG: shn:Shewana3_1612 hypothetical protein; hypothetical protein 4683110 5664236 Spea_3852 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503697.1 4680141 R 398579 CDS YP_001503698.1 157963664 5664237 complement(4683269..4683919) 1 NC_009901.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: reu:Reut_B4119 regulatory protein GntR, HTH:GntR, C-terminal; GntR family transcriptional regulator 4683919 5664237 Spea_3853 Shewanella pealeana ATCC 700345 GntR family transcriptional regulator YP_001503698.1 4683269 R 398579 CDS YP_001503699.1 157963665 5664238 complement(4684001..4684903) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bur:Bcep18194_C7696 transcriptional regulator, LysR family; LysR family transcriptional regulator 4684903 5664238 Spea_3854 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503699.1 4684001 R 398579 CDS YP_001503700.1 157963666 5664239 complement(4684997..4686178) 1 NC_009901.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: cdf:CD3002 probable carbohydrate hydrolase; D-galactarate dehydratase/Altronate hydrolase domain-containing protein 4686178 5664239 Spea_3855 Shewanella pealeana ATCC 700345 D-galactarate dehydratase/Altronate hydrolase domain-containing protein YP_001503700.1 4684997 R 398579 CDS YP_001503701.1 157963667 5664240 complement(4686175..4686510) 1 NC_009901.1 KEGG: reh:H16_A1259 D-galactarate dehydratase; D-galactarate dehydratase 4686510 5664240 Spea_3856 Shewanella pealeana ATCC 700345 D-galactarate dehydratase YP_001503701.1 4686175 R 398579 CDS YP_001503702.1 157963668 5664241 4686977..4688623 1 NC_009901.1 member of the betaine, carnitine, choline transporter (BCCT) family; unknown function; putative transporter 4688623 5664241 Spea_3857 Shewanella pealeana ATCC 700345 putative transporter YP_001503702.1 4686977 D 398579 CDS YP_001503703.1 157963669 5664242 4688627..4689748 1 NC_009901.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rca:Rcas_3855 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 4689748 5664242 Spea_3858 Shewanella pealeana ATCC 700345 mandelate racemase/muconate lactonizing protein YP_001503703.1 4688627 D 398579 CDS YP_001503704.1 157963670 5664243 4690418..4691281 1 NC_009901.1 TIGRFAM: cytochrome C family protein; PFAM: multihaem cytochrome; KEGG: son:SO_1777 decaheme cytochrome c MtrA; cytochrome C family protein 4691281 5664243 Spea_3859 Shewanella pealeana ATCC 700345 cytochrome C family protein YP_001503704.1 4690418 D 398579 CDS YP_001503705.1 157963671 5664244 4691291..4693012 1 NC_009901.1 KEGG: sfr:Sfri_3685 outer membrane protein; hypothetical protein 4693012 5664244 Spea_3860 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503705.1 4691291 D 398579 CDS YP_001503706.1 157963672 5664245 4693023..4695473 1 NC_009901.1 TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sfr:Sfri_3128 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family protein; anaerobic dimethyl sulfoxide reductase subunit A 4695473 5664245 Spea_3861 Shewanella pealeana ATCC 700345 anaerobic dimethyl sulfoxide reductase subunit A YP_001503706.1 4693023 D 398579 CDS YP_001503707.1 157963673 5664246 4695484..4696101 1 NC_009901.1 TIGRFAM: Dimethylsulfoxide reductase chain B; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vpa:VP1448 anaerobic dimethyl sulfoxide reductase, subunit B; dimethylsulfoxide reductase subunit B 4696101 5664246 Spea_3862 Shewanella pealeana ATCC 700345 dimethylsulfoxide reductase subunit B YP_001503707.1 4695484 D 398579 CDS YP_001503708.1 157963674 5664247 4696103..4698190 1 NC_009901.1 KEGG: son:SO_4356 hypothetical protein; hypothetical protein 4698190 5664247 Spea_3863 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503708.1 4696103 D 398579 CDS YP_001503709.1 157963675 5664248 4698245..4698865 1 NC_009901.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: sfr:Sfri_3126 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 4698865 5664248 Spea_3864 Shewanella pealeana ATCC 700345 cytoplasmic chaperone TorD family protein YP_001503709.1 4698245 D 398579 CDS YP_001503710.1 157963676 5664249 4698856..4699221 1 NC_009901.1 hypothetical protein 4699221 5664249 Spea_3865 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503710.1 4698856 D 398579 CDS YP_001503711.1 157963677 5664250 complement(4699284..4699976) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_0277 transcriptional regulator, TetR family; TetR family transcriptional regulator 4699976 5664250 Spea_3866 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001503711.1 4699284 R 398579 CDS YP_001503712.1 157963678 5664251 4700246..4701979 1 NC_009901.1 TIGRFAM: oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: pst:PSPTO_0148 oligopeptide transporter, OPT family; OPT family oligopeptide transporter 4701979 5664251 Spea_3867 Shewanella pealeana ATCC 700345 OPT family oligopeptide transporter YP_001503712.1 4700246 D 398579 CDS YP_001503713.1 157963679 5664252 complement(4702004..4703218) 1 NC_009901.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: sfr:Sfri_2899 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4703218 5664252 Spea_3868 Shewanella pealeana ATCC 700345 OmpA/MotB domain-containing protein YP_001503713.1 4702004 R 398579 CDS YP_001503714.1 157963680 5664253 complement(4703226..4714676) 1 NC_009901.1 TIGRFAM: conserved repeat domain; putative outer membrane adhesin like proteiin; PFAM: protein of unknown function DUF11; KEGG: shn:Shewana3_0168 Ig family protein; outer membrane adhesin-like protein 4714676 5664253 Spea_3869 Shewanella pealeana ATCC 700345 outer membrane adhesin-like protein YP_001503714.1 4703226 R 398579 CDS YP_001503715.1 157963681 5664254 complement(4715208..4715642) 1 NC_009901.1 KEGG: ppr:PBPRB1867 hypothetical protein; hypothetical protein 4715642 5664254 Spea_3870 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503715.1 4715208 R 398579 CDS YP_001503716.1 157963682 5664255 complement(4715680..4717122) 1 NC_009901.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: ppr:PBPRB0277 hypothetical amino acid decarboxylase; pyridoxal-dependent decarboxylase 4717122 5664255 Spea_3871 Shewanella pealeana ATCC 700345 pyridoxal-dependent decarboxylase YP_001503716.1 4715680 R 398579 CDS YP_001503717.1 157963683 5664256 complement(4717313..4718572) 1 NC_009901.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vha:VIBHAR_06184 hypothetical protein; amidohydrolase 4718572 5664256 Spea_3872 Shewanella pealeana ATCC 700345 amidohydrolase YP_001503717.1 4717313 R 398579 CDS YP_001503718.1 157963684 5664257 4718783..4719481 1 NC_009901.1 PFAM: protein of unknown function DUF159; KEGG: maq:Maqu_3372 protein of unknown function DUF159; hypothetical protein 4719481 5664257 Spea_3873 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503718.1 4718783 D 398579 CDS YP_001503719.1 157963685 5664258 complement(4719497..4720564) 1 NC_009901.1 PFAM: aminoglycoside phosphotransferase; KEGG: shn:Shewana3_3807 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4720564 5664258 Spea_3874 Shewanella pealeana ATCC 700345 aminoglycoside phosphotransferase YP_001503719.1 4719497 R 398579 CDS YP_001503720.1 157963686 5664259 complement(4720662..4721567) 1 NC_009901.1 KEGG: shn:Shewana3_3808 hypothetical protein; hypothetical protein 4721567 5664259 Spea_3875 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503720.1 4720662 R 398579 CDS YP_001503721.1 157963687 5664260 complement(4721695..4722822) 1 NC_009901.1 KEGG: slo:Shew_3496 hypothetical protein; hypothetical protein 4722822 5664260 Spea_3876 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503721.1 4721695 R 398579 CDS YP_001503722.1 157963688 5664261 4723151..4723783 1 NC_009901.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 4723783 gmk 5664261 gmk Shewanella pealeana ATCC 700345 guanylate kinase YP_001503722.1 4723151 D 398579 CDS YP_001503723.1 157963689 5664262 4723845..4724129 1 NC_009901.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 4724129 rpoZ 5664262 rpoZ Shewanella pealeana ATCC 700345 DNA-directed RNA polymerase subunit omega YP_001503723.1 4723845 D 398579 CDS YP_001503724.1 157963690 5664263 4724143..4726248 1 NC_009901.1 KEGG: slo:Shew_3499 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 4726248 5664263 Spea_3879 Shewanella pealeana ATCC 700345 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_001503724.1 4724143 D 398579 CDS YP_001503725.1 157963691 5664264 4726276..4726659 1 NC_009901.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: slo:Shew_3500 putative endoribonuclease L-PSP; putative endoribonuclease L-PSP 4726659 5664264 Spea_3880 Shewanella pealeana ATCC 700345 putative endoribonuclease L-PSP YP_001503725.1 4726276 D 398579 CDS YP_001503726.1 157963692 5664265 4726801..4727487 1 NC_009901.1 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 4727487 5664265 Spea_3881 Shewanella pealeana ATCC 700345 tRNA guanosine-2'-O-methyltransferase YP_001503726.1 4726801 D 398579 CDS YP_001503727.1 157963693 5664266 4727800..4729455 1 NC_009901.1 PFAM: AMP-dependent synthetase and ligase; KEGG: slo:Shew_3502 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 4729455 5664266 Spea_3882 Shewanella pealeana ATCC 700345 AMP-dependent synthetase and ligase YP_001503727.1 4727800 D 398579 CDS YP_001503728.1 157963694 5664267 4729636..4730559 1 NC_009901.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: shw:Sputw3181_3775 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter 4730559 5664267 Spea_3883 Shewanella pealeana ATCC 700345 CaCA family Na(+)/Ca(+) antiporter YP_001503728.1 4729636 D 398579 CDS YP_001503729.1 157963695 5664268 4730762..4732852 1 NC_009901.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 4732852 5664268 Spea_3884 Shewanella pealeana ATCC 700345 ATP-dependent DNA helicase RecG YP_001503729.1 4730762 D 398579 CDS YP_001503730.1 157963696 5664269 4732994..4733857 1 NC_009901.1 KEGG: slo:Shew_3508 hypothetical protein; hypothetical protein 4733857 5664269 Spea_3885 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503730.1 4732994 D 398579 CDS YP_001503731.1 157963697 5664270 4734113..4734838 1 NC_009901.1 KEGG: shm:Shewmr7_3674 hypothetical protein; hypothetical protein 4734838 5664270 Spea_3886 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503731.1 4734113 D 398579 CDS YP_001503732.1 157963698 5664271 4734831..4735649 1 NC_009901.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: slo:Shew_3510 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4735649 5664271 Spea_3887 Shewanella pealeana ATCC 700345 phospholipid/glycerol acyltransferase YP_001503732.1 4734831 D 398579 CDS YP_001503733.1 157963699 5664272 4735646..4735900 1 NC_009901.1 KEGG: slo:Shew_3511 acyl carrier protein, putative; acyl carrier protein 4735900 5664272 Spea_3888 Shewanella pealeana ATCC 700345 acyl carrier protein YP_001503733.1 4735646 D 398579 CDS YP_001503734.1 157963700 5664273 4735909..4736157 1 NC_009901.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 4736157 5664273 Spea_3889 Shewanella pealeana ATCC 700345 acyl carrier protein YP_001503734.1 4735909 D 398579 CDS YP_001503735.1 157963701 5664274 4736157..4736705 1 NC_009901.1 KEGG: slo:Shew_3513 hypothetical protein; hypothetical protein 4736705 5664274 Spea_3890 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503735.1 4736157 D 398579 CDS YP_001503736.1 157963702 5664275 4736702..4738081 1 NC_009901.1 KEGG: slo:Shew_3514 hypothetical protein; hypothetical protein 4738081 5664275 Spea_3891 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503736.1 4736702 D 398579 CDS YP_001503737.1 157963703 5664276 4738078..4738464 1 NC_009901.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sbm:Shew185_0336 thioester dehydrase family protein; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 4738464 5664276 Spea_3892 Shewanella pealeana ATCC 700345 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001503737.1 4738078 D 398579 CDS YP_001503738.1 157963704 5664277 4738464..4740221 1 NC_009901.1 PFAM: glycosyl transferase family 2; lipid A biosynthesis acyltransferase; KEGG: slo:Shew_3516 glycosyl transferase, family 2; glycosyl transferase family protein 4740221 5664277 Spea_3893 Shewanella pealeana ATCC 700345 glycosyl transferase family protein YP_001503738.1 4738464 D 398579 CDS YP_001503739.1 157963705 5664278 4740218..4741780 1 NC_009901.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: slo:Shew_3517 histidine ammonia-lyase; histidine ammonia-lyase 4741780 5664278 Spea_3894 Shewanella pealeana ATCC 700345 histidine ammonia-lyase YP_001503739.1 4740218 D 398579 CDS YP_001503740.1 157963706 5664279 4741780..4742229 1 NC_009901.1 KEGG: shn:Shewana3_0334 conserved hypothetical 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 4742229 5664279 Spea_3895 Shewanella pealeana ATCC 700345 4-hydroxybenzoyl-CoA thioesterase YP_001503740.1 4741780 D 398579 CDS YP_001503741.1 157963707 5664280 4742226..4742972 1 NC_009901.1 KEGG: slo:Shew_3519 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 4742972 5664280 Spea_3896 Shewanella pealeana ATCC 700345 outer membrane lipoprotein carrier protein LolA YP_001503741.1 4742226 D 398579 CDS YP_001503742.1 157963708 5664281 4742972..4745386 1 NC_009901.1 KEGG: spc:Sputcn32_0437 hypothetical protein; hypothetical protein 4745386 5664281 Spea_3897 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503742.1 4742972 D 398579 CDS YP_001503743.1 157963709 5664282 4745376..4746665 1 NC_009901.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: shm:Shewmr7_3686 monooxygenase, FAD-binding protein; tryptophan halogenase 4746665 5664282 Spea_3898 Shewanella pealeana ATCC 700345 tryptophan halogenase YP_001503743.1 4745376 D 398579 CDS YP_001503744.1 157963710 5664283 4746653..4747348 1 NC_009901.1 KEGG: son:SO_4379 hypothetical protein; hypothetical protein 4747348 5664283 Spea_3899 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503744.1 4746653 D 398579 CDS YP_001503745.1 157963711 5664284 4747371..4748669 1 NC_009901.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 4748669 5664284 Spea_3900 Shewanella pealeana ATCC 700345 3-oxoacyl-ACP synthase YP_001503745.1 4747371 D 398579 CDS YP_001503746.1 157963712 5664285 4748662..4749138 1 NC_009901.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sfr:Sfri_0339 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 4749138 5664285 Spea_3901 Shewanella pealeana ATCC 700345 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001503746.1 4748662 D 398579 CDS YP_001503747.1 157963713 5664286 4749217..4749942 1 NC_009901.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 4749942 fabG 5664286 fabG Shewanella pealeana ATCC 700345 3-ketoacyl-ACP reductase YP_001503747.1 4749217 D 398579 CDS YP_001503748.1 157963714 5664287 4749939..4751186 1 NC_009901.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 4751186 5664287 Spea_3903 Shewanella pealeana ATCC 700345 3-oxoacyl-(acyl carrier protein) synthase II YP_001503748.1 4749939 D 398579 CDS YP_001503749.1 157963715 5664288 4751801..4752127 1 NC_009901.1 PFAM: Rhodanese domain protein; KEGG: she:Shewmr4_0323 rhodanese domain protein; rhodanese domain-containing protein 4752127 5664288 Spea_3904 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001503749.1 4751801 D 398579 CDS YP_001503750.1 157963716 5664289 complement(4752145..4752594) 1 NC_009901.1 TIGRFAM: thioesterase domain, putative; PFAM: Thioesterase putative; KEGG: she:Shewmr4_0320 thioesterase domain, putative; thioesterase domain-containing protein 4752594 5664289 Spea_3905 Shewanella pealeana ATCC 700345 thioesterase domain-containing protein YP_001503750.1 4752145 R 398579 CDS YP_001503751.1 157963717 5664290 complement(4752644..4753081) 1 NC_009901.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 4753081 5664290 Spea_3906 Shewanella pealeana ATCC 700345 D-tyrosyl-tRNA(Tyr) deacylase YP_001503751.1 4752644 R 398579 CDS YP_001503752.1 157963718 5664291 complement(4753426..4754007) 1 NC_009901.1 KEGG: sbm:Shew185_0316 hypothetical protein; hypothetical protein 4754007 5664291 Spea_3907 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503752.1 4753426 R 398579 CDS YP_001503753.1 157963719 5664292 complement(4754027..4754959) 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: slo:Shew_3544 alpha/beta hydrolase fold; prolyl aminopeptidase 4754959 5664292 Spea_3908 Shewanella pealeana ATCC 700345 prolyl aminopeptidase YP_001503753.1 4754027 R 398579 CDS YP_001503754.1 157963720 5664293 complement(4754959..4755981) 1 NC_009901.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 4755981 rbn 5664293 rbn Shewanella pealeana ATCC 700345 ribonuclease BN YP_001503754.1 4754959 R 398579 CDS YP_001503755.1 157963721 5664294 4756115..4756342 1 NC_009901.1 KEGG: slo:Shew_3546 hypothetical protein; hypothetical protein 4756342 5664294 Spea_3910 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503755.1 4756115 D 398579 CDS YP_001503756.1 157963722 5664295 4756373..4757020 1 NC_009901.1 KEGG: sbm:Shew185_0312 hypothetical protein; hypothetical protein 4757020 5664295 Spea_3911 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503756.1 4756373 D 398579 CDS YP_001503757.1 157963723 5664296 4757204..4758418 1 NC_009901.1 KEGG: slo:Shew_3549 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4758418 5664296 Spea_3912 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503757.1 4757204 D 398579 CDS YP_001503758.1 157963724 5664297 complement(4758754..4759617) 1 NC_009901.1 TIGRFAM: pyridoxal kinase; KEGG: vfi:VF2056 pyridoxine kinase; pyridoxal kinase 4759617 5664297 Spea_3913 Shewanella pealeana ATCC 700345 pyridoxal kinase YP_001503758.1 4758754 R 398579 CDS YP_001503759.1 157963725 5664298 complement(4759907..4761361) 1 NC_009901.1 PFAM: Disulphide bond formation protein DsbB; KEGG: shm:Shewmr7_0287 disulphide bond formation protein DsbB; disulfide bond formation protein DsbB 4761361 5664298 Spea_3914 Shewanella pealeana ATCC 700345 disulfide bond formation protein DsbB YP_001503759.1 4759907 R 398579 CDS YP_001503760.1 157963726 5664299 complement(4762221..4764050) 1 NC_009901.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: saz:Sama_3415 virulence regulator BipA; GTP-binding protein TypA 4764050 5664299 Spea_3915 Shewanella pealeana ATCC 700345 GTP-binding protein TypA YP_001503760.1 4762221 R 398579 CDS YP_001503761.1 157963727 5664300 4764725..4766134 1 NC_009901.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 4766134 glnA 5664300 glnA Shewanella pealeana ATCC 700345 glutamine synthetase YP_001503761.1 4764725 D 398579 CDS YP_001503762.1 157963728 5664301 4766310..4767572 1 NC_009901.1 PFAM: sodium:dicarboxylate symporter; KEGG: shn:Shewana3_0297 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 4767572 5664301 Spea_3917 Shewanella pealeana ATCC 700345 sodium:dicarboxylate symporter YP_001503762.1 4766310 D 398579 CDS YP_001503763.1 157963729 5664302 4767795..4768199 1 NC_009901.1 KEGG: pha:PSHAa1478 hypothetical protein; hypothetical protein 4768199 5664302 Spea_3918 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503763.1 4767795 D 398579 CDS YP_001503764.1 157963730 5664303 4768245..4768559 1 NC_009901.1 PFAM: helix-turn-helix domain protein; KEGG: pat:Patl_1386 transcriptional regulator, XRE family; XRE family transcriptional regulator 4768559 5664303 Spea_3919 Shewanella pealeana ATCC 700345 XRE family transcriptional regulator YP_001503764.1 4768245 D 398579 CDS YP_001503765.1 157963731 5664304 complement(4768626..4769636) 1 NC_009901.1 KEGG: sus:Acid_2127 glycosyl hydrolase, BNR repeat-containing protein; BNR repeat-containing glycosyl hydrolase 4769636 5664304 Spea_3920 Shewanella pealeana ATCC 700345 BNR repeat-containing glycosyl hydrolase YP_001503765.1 4768626 R 398579 CDS YP_001503766.1 157963732 5664305 4769883..4770188 1 NC_009901.1 hypothetical protein 4770188 5664305 Spea_3921 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503766.1 4769883 D 398579 CDS YP_001503767.1 157963733 5664306 complement(4770233..4771348) 1 NC_009901.1 PFAM: aminotransferase class V; KEGG: sbm:Shew185_0300 aminotransferase class V; class V aminotransferase 4771348 5664306 Spea_3922 Shewanella pealeana ATCC 700345 class V aminotransferase YP_001503767.1 4770233 R 398579 CDS YP_001503768.1 157963734 5664307 complement(4771353..4772525) 1 NC_009901.1 PFAM: Domain of unknown function DUF1864; KEGG: sbm:Shew185_0299 domain of unknown function DUF1864; hypothetical protein 4772525 5664307 Spea_3923 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503768.1 4771353 R 398579 CDS YP_001503769.1 157963735 5664308 4772696..4773148 1 NC_009901.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: slo:Shew_3558 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 4773148 5664308 Spea_3924 Shewanella pealeana ATCC 700345 AsnC family transcriptional regulator YP_001503769.1 4772696 D 398579 CDS YP_001503770.1 157963736 5664309 4773308..4774465 1 NC_009901.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: shw:Sputw3181_0227 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 4774465 5664309 Spea_3925 Shewanella pealeana ATCC 700345 iron-containing alcohol dehydrogenase YP_001503770.1 4773308 D 398579 CDS YP_001503771.1 157963737 5664310 4774570..4775247 1 NC_009901.1 PFAM: ThiJ/PfpI domain protein; KEGG: sbm:Shew185_0262 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 4775247 5664310 Spea_3926 Shewanella pealeana ATCC 700345 ThiJ/PfpI domain-containing protein YP_001503771.1 4774570 D 398579 CDS YP_001503772.1 157963738 5664311 complement(4775404..4776048) 1 NC_009901.1 KEGG: ppr:PBPRA1243 hypothetical protein; hypothetical protein 4776048 5664311 Spea_3927 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503772.1 4775404 R 398579 CDS YP_001503773.1 157963739 5664312 4776409..4776954 1 NC_009901.1 KEGG: slo:Shew_3559 hypothetical protein; hypothetical protein 4776954 5664312 Spea_3928 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503773.1 4776409 D 398579 CDS YP_001503774.1 157963740 5664313 4777107..4778147 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sbl:Sbal_0267 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 4778147 5664313 Spea_3929 Shewanella pealeana ATCC 700345 signal transduction histidine kinase, nitrogen specific, NtrB YP_001503774.1 4777107 D 398579 CDS YP_001503775.1 157963741 5664314 4778165..4779574 1 NC_009901.1 KEGG: shm:Shewmr7_3764 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 4779574 5664314 Spea_3930 Shewanella pealeana ATCC 700345 nitrogen metabolism transcriptional regulator NtrC YP_001503775.1 4778165 D 398579 CDS YP_001503776.1 157963742 5664315 complement(4779643..4780512) 1 NC_009901.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: shm:Shewmr7_3767 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 4780512 5664315 Spea_3931 Shewanella pealeana ATCC 700345 cation diffusion facilitator family transporter YP_001503776.1 4779643 R 398579 CDS YP_001503777.1 157963743 5664316 complement(4780672..4781154) 1 NC_009901.1 PFAM: protein of unknown function Spy-related; KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related; hypothetical protein 4781154 5664316 Spea_3932 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503777.1 4780672 R 398579 CDS YP_001503778.1 157963744 5664317 4781386..4782069 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_3570 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4782069 5664317 Spea_3933 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001503778.1 4781386 D 398579 CDS YP_001503779.1 157963745 5664318 4782070..4783446 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_3571 integral membrane sensor signal transduction histidine kinase; histidine kinase 4783446 5664318 Spea_3934 Shewanella pealeana ATCC 700345 histidine kinase YP_001503779.1 4782070 D 398579 CDS YP_001503780.1 157963746 5664319 complement(4783462..4784109) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: sbl:Sbal_0259 putative transcriptional regulator, TetR family; regulatory protein TetR 4784109 5664319 Spea_3935 Shewanella pealeana ATCC 700345 regulatory protein TetR YP_001503780.1 4783462 R 398579 CDS YP_001503781.1 157963747 5664320 4784231..4785118 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: shm:Shewmr7_2226 transcriptional regulator, LysR family; LysR family transcriptional regulator 4785118 5664320 Spea_3936 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503781.1 4784231 D 398579 CDS YP_001503782.1 157963748 5664321 complement(4785588..4786832) 1 NC_009901.1 KEGG: sbl:Sbal_0256 hypothetical protein; hypothetical protein 4786832 5664321 Spea_3937 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503782.1 4785588 R 398579 CDS YP_001503783.1 157963749 5664322 complement(4787112..4787465) 1 NC_009901.1 KEGG: shm:Shewmr7_2229 tetraheme cytochrome c; tetraheme cytochrome c 4787465 5664322 Spea_3938 Shewanella pealeana ATCC 700345 tetraheme cytochrome c YP_001503783.1 4787112 R 398579 CDS YP_001503784.1 157963750 5664323 complement(4787494..4789014) 1 NC_009901.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: spc:Sputcn32_3536 flavocytochrome c; flavocytochrome c 4789014 5664323 Spea_3939 Shewanella pealeana ATCC 700345 flavocytochrome c YP_001503784.1 4787494 R 398579 CDS YP_001503785.1 157963751 5664324 4789486..4790418 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vfi:VF0021 transcriptional regulators, LysR family; LysR family transcriptional regulator 4790418 5664324 Spea_3940 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503785.1 4789486 D 398579 CDS YP_001503786.1 157963752 5664325 complement(4790736..4791716) 1 NC_009901.1 TIGRFAM: Quinone oxidoreductase putative YhdH/YhfP; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sbl:Sbal_0250 alcohol dehydrogenase, zinc-binding domain protein; quinone oxidoreductase 4791716 5664325 Spea_3941 Shewanella pealeana ATCC 700345 quinone oxidoreductase YP_001503786.1 4790736 R 398579 CDS YP_001503787.1 157963753 5664326 4791974..4793494 1 NC_009901.1 PFAM: aldehyde dehydrogenase; KEGG: shm:Shewmr7_3772 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 4793494 5664326 Spea_3942 Shewanella pealeana ATCC 700345 aldehyde dehydrogenase YP_001503787.1 4791974 D 398579 CDS YP_001503788.1 157963754 5664327 4793708..4795261 1 NC_009901.1 KEGG: son:SO_2407 hypothetical protein; hypothetical protein 4795261 5664327 Spea_3943 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503788.1 4793708 D 398579 CDS YP_001503789.1 157963755 5664328 4795292..4796170 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: sbm:Shew185_2284 radical SAM domain protein; radical SAM domain-containing protein 4796170 5664328 Spea_3944 Shewanella pealeana ATCC 700345 radical SAM domain-containing protein YP_001503789.1 4795292 D 398579 CDS YP_001503790.1 157963756 5664329 complement(4798113..4799060) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbm:Shew185_2285 transcriptional regulator, LysR family; LysR family transcriptional regulator 4799060 5664329 Spea_3945 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503790.1 4798113 R 398579 CDS YP_001503791.1 157963757 5664330 4799324..4799785 1 NC_009901.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sbm:Shew185_4126 RNA methyltransferase, TrmH family, group 2; RNA methyltransferase 4799785 5664330 Spea_3946 Shewanella pealeana ATCC 700345 RNA methyltransferase YP_001503791.1 4799324 D 398579 CDS YP_001503792.1 157963758 5664331 complement(4799885..4801330) 1 NC_009901.1 PFAM: peptidase M16 domain protein; KEGG: shn:Shewana3_3939 DNA-directed RNA polymerase; peptidase M16 domain-containing protein 4801330 5664331 Spea_3947 Shewanella pealeana ATCC 700345 peptidase M16 domain-containing protein YP_001503792.1 4799885 R 398579 CDS YP_001503793.1 157963759 5664332 complement(4801327..4802658) 1 NC_009901.1 PFAM: peptidase M16 domain protein; KEGG: slo:Shew_3581 peptidase M16 domain protein; peptidase M16 domain-containing protein 4802658 5664332 Spea_3948 Shewanella pealeana ATCC 700345 peptidase M16 domain-containing protein YP_001503793.1 4801327 R 398579 CDS YP_001503794.1 157963760 5664333 4802932..4803600 1 NC_009901.1 PFAM: type IV pilus assembly PilZ; KEGG: slo:Shew_3582 hypothetical protein; type IV pilus assembly PilZ 4803600 5664333 Spea_3949 Shewanella pealeana ATCC 700345 type IV pilus assembly PilZ YP_001503794.1 4802932 D 398579 CDS YP_001503795.1 157963761 5664334 complement(4803675..4804667) 1 NC_009901.1 KEGG: bfs:BF1302 hypothetical protein; hypothetical protein 4804667 5664334 Spea_3950 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503795.1 4803675 R 398579 CDS YP_001503796.1 157963762 5664335 complement(4804719..4805354) 1 NC_009901.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: slo:Shew_3583 methyltransferase type 12; type 11 methyltransferase 4805354 5664335 Spea_3951 Shewanella pealeana ATCC 700345 type 11 methyltransferase YP_001503796.1 4804719 R 398579 CDS YP_001503797.1 157963763 5664336 complement(4805393..4805707) 1 NC_009901.1 KEGG: slo:Shew_3584 hypothetical protein; hypothetical protein 4805707 5664336 Spea_3952 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503797.1 4805393 R 398579 CDS YP_001503798.1 157963764 5664337 4806122..4808266 1 NC_009901.1 KEGG: shw:Sputw3181_3881 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4808266 5664337 Spea_3953 Shewanella pealeana ATCC 700345 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001503798.1 4806122 D 398579 CDS YP_001503799.1 157963765 5664338 complement(4808529..4809200) 1 NC_009901.1 PFAM: DTW domain containing protein; KEGG: sbm:Shew185_4137 DTW domain containing protein; DTW domain-containing protein 4809200 5664338 Spea_3954 Shewanella pealeana ATCC 700345 DTW domain-containing protein YP_001503799.1 4808529 R 398579 CDS YP_001503800.1 157963766 5664339 4809422..4810438 1 NC_009901.1 KEGG: slo:Shew_3587 hypothetical protein; hypothetical protein 4810438 5664339 Spea_3955 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503800.1 4809422 D 398579 CDS YP_001503801.1 157963767 5664340 complement(4810554..4811756) 1 NC_009901.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: shn:Shewana3_3948 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 4811756 5664340 Spea_3956 Shewanella pealeana ATCC 700345 Bcr/CflA subfamily drug resistance transporter YP_001503801.1 4810554 R 398579 CDS YP_001503802.1 157963768 5664341 4811857..4812825 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbl:Sbal_0195 transcriptional regulator, LysR family; LysR family transcriptional regulator 4812825 5664341 Spea_3957 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503802.1 4811857 D 398579 CDS YP_001503803.1 157963769 5664342 4812990..4813319 1 NC_009901.1 KEGG: slo:Shew_3590 hypothetical protein; hypothetical protein 4813319 5664342 Spea_3958 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503803.1 4812990 D 398579 CDS YP_001503804.1 157963770 5664343 complement(4813337..4814605) 1 NC_009901.1 KEGG: slo:Shew_3591 hypothetical protein; hypothetical protein 4814605 5664343 Spea_3959 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503804.1 4813337 R 398579 CDS YP_001503805.1 157963771 5664344 complement(4814948..4816369) 1 NC_009901.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: slo:Shew_3592 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 4816369 5664344 Spea_3960 Shewanella pealeana ATCC 700345 Sel1 domain-containing protein YP_001503805.1 4814948 R 398579 CDS YP_001503806.1 157963772 5664345 complement(4816487..4817221) 1 NC_009901.1 KEGG: slo:Shew_3593 hypothetical protein; hypothetical protein 4817221 5664345 Spea_3961 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503806.1 4816487 R 398579 CDS YP_001503807.1 157963773 5664346 4817405..4817923 1 NC_009901.1 KEGG: slo:Shew_3594 hypothetical protein; hypothetical protein 4817923 5664346 Spea_3962 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503807.1 4817405 D 398579 CDS YP_001503808.1 157963774 5664347 4818028..4818495 1 NC_009901.1 PFAM: protein of unknown function DUF1332; KEGG: slo:Shew_3595 protein of unknown function DUF1332; hypothetical protein 4818495 5664347 Spea_3963 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503808.1 4818028 D 398579 CDS YP_001503809.1 157963775 5664348 complement(4819023..4819313) 1 NC_009901.1 KEGG: shw:Sputw3181_2184 hypothetical protein; hypothetical protein 4819313 5664348 Spea_3964 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503809.1 4819023 R 398579 CDS YP_001503810.1 157963776 5664349 complement(4819335..4820276) 1 NC_009901.1 PFAM: Polysulphide reductase NrfD; KEGG: shw:Sputw3181_3893 polysulphide reductase, NrfD; polysulfide reductase NrfD 4820276 5664349 Spea_3965 Shewanella pealeana ATCC 700345 polysulfide reductase NrfD YP_001503810.1 4819335 R 398579 CDS YP_001503811.1 157963777 5664350 complement(4820273..4820956) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shw:Sputw3181_3894 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 4820956 5664350 Spea_3966 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503811.1 4820273 R 398579 CDS YP_001503812.1 157963778 5664351 complement(4820971..4821441) 1 NC_009901.1 KEGG: shw:Sputw3181_3895 formate-dependent nitrite reductase; formate-dependent nitrite reductase 4821441 5664351 Spea_3967 Shewanella pealeana ATCC 700345 formate-dependent nitrite reductase YP_001503812.1 4820971 R 398579 CDS YP_001503813.1 157963779 5664352 complement(4821524..4822015) 1 NC_009901.1 KEGG: slo:Shew_3155 hypothetical protein; hypothetical protein 4822015 5664352 Spea_3968 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503813.1 4821524 R 398579 CDS YP_001503814.1 157963780 5664353 4822559..4823524 1 NC_009901.1 PFAM: regulatory protein LysR; KEGG: shn:Shewana3_3964 transcriptional regulator, LysR family; LysR family transcriptional regulator 4823524 5664353 Spea_3969 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503814.1 4822559 D 398579 CDS YP_001503815.1 157963781 5664354 complement(4823602..4824555) 1 NC_009901.1 PFAM: regulatory protein LysR; KEGG: slo:Shew_3153 transcriptional regulator, LysR family; LysR family transcriptional regulator 4824555 5664354 Spea_3970 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503815.1 4823602 R 398579 CDS YP_001503816.1 157963782 5664355 4824773..4826500 1 NC_009901.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 4826500 5664355 Spea_3971 Shewanella pealeana ATCC 700345 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_001503816.1 4824773 D 398579 CDS YP_001503817.1 157963783 5664356 4826500..4827285 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; KEGG: she:Shewmr4_3768 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4827285 5664356 Spea_3972 Shewanella pealeana ATCC 700345 alpha/beta hydrolase fold protein YP_001503817.1 4826500 D 398579 CDS YP_001503818.1 157963784 5664357 4827341..4828414 1 NC_009901.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 4828414 5664357 Spea_3973 Shewanella pealeana ATCC 700345 O-succinylbenzoate synthase YP_001503818.1 4827341 D 398579 CDS YP_001503819.1 157963785 5664358 4828495..4829949 1 NC_009901.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: shm:Shewmr7_3843 O-succinylbenzoate-CoA ligase; o-succinylbenzoate--CoA ligase 4829949 5664358 Spea_3974 Shewanella pealeana ATCC 700345 o-succinylbenzoate--CoA ligase YP_001503819.1 4828495 D 398579 CDS YP_001503820.1 157963786 5664359 complement(4830318..4830599) 1 NC_009901.1 hypothetical protein 4830599 5664359 Spea_3975 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503820.1 4830318 R 398579 CDS YP_001503821.1 157963787 5664360 4831284..4832300 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 4832300 5664360 Spea_3976 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001503821.1 4831284 D 398579 CDS YP_001503822.1 157963788 5664361 complement(4832882..4833739) 1 NC_009901.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 4833739 5664361 Spea_3977 Shewanella pealeana ATCC 700345 RNA polymerase factor sigma-32 YP_001503822.1 4832882 R 398579 CDS YP_001503823.1 157963789 5664362 complement(4833973..4834938) 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: slo:Shew_3604 protein of unknown function DUF214; hypothetical protein 4834938 5664362 Spea_3978 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503823.1 4833973 R 398579 CDS YP_001503824.1 157963790 5664363 complement(4834948..4835640) 1 NC_009901.1 KEGG: sbm:Shew185_4163 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 4835640 5664363 Spea_3979 Shewanella pealeana ATCC 700345 cell division ATP-binding protein FtsE YP_001503824.1 4834948 R 398579 CDS YP_001503825.1 157963791 5664364 complement(4835734..4837665) 1 NC_009901.1 KEGG: sbm:Shew185_4164 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 4837665 5664364 Spea_3980 Shewanella pealeana ATCC 700345 signal recognition particle-docking protein FtsY YP_001503825.1 4835734 R 398579 CDS YP_001503826.1 157963792 5664365 4837891..4838520 1 NC_009901.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein; KEGG: sfr:Sfri_0274 putative methyltransferase; putative methyltransferase 4838520 5664365 Spea_3981 Shewanella pealeana ATCC 700345 putative methyltransferase YP_001503826.1 4837891 D 398579 CDS YP_001503827.1 157963793 5664366 4838521..4838802 1 NC_009901.1 PFAM: protein of unknown function DUF1145; KEGG: spc:Sputcn32_0287 protein of unknown function DUF1145; hypothetical protein 4838802 5664366 Spea_3982 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503827.1 4838521 D 398579 CDS YP_001503828.1 157963794 5664367 complement(4839432..4839995) 1 NC_009901.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: slo:Shew_3540 NapC/NirT cytochrome c domain protein; NapC/NirT cytochrome c domain-containing protein 4839995 5664367 Spea_3983 Shewanella pealeana ATCC 700345 NapC/NirT cytochrome c domain-containing protein YP_001503828.1 4839432 R 398579 CDS YP_001503829.1 157963795 5664368 4840385..4840813 1 NC_009901.1 KEGG: slo:Shew_3539 hypothetical protein; hypothetical protein 4840813 5664368 Spea_3984 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503829.1 4840385 D 398579 CDS YP_001503830.1 157963796 5664369 4841018..4841437 1 NC_009901.1 KEGG: sfr:Sfri_0591 hypothetical protein; hypothetical protein 4841437 5664369 Spea_3985 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503830.1 4841018 D 398579 CDS YP_001503831.1 157963797 5664370 4841556..4841972 1 NC_009901.1 KEGG: slo:Shew_3537 hypothetical protein; hypothetical protein 4841972 5664370 Spea_3986 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503831.1 4841556 D 398579 CDS YP_001503832.1 157963798 5664371 4842116..4842730 1 NC_009901.1 KEGG: slo:Shew_3536 hypothetical protein; hypothetical protein 4842730 5664371 Spea_3987 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503832.1 4842116 D 398579 CDS YP_001503833.1 157963799 5664372 4842755..4844677 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sfr:Sfri_0267 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4844677 5664372 Spea_3988 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001503833.1 4842755 D 398579 CDS YP_001503834.1 157963800 5664373 4844691..4847828 1 NC_009901.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sfr:Sfri_0266 heavy metal efflux pump, CzcA family protein; CzcA family heavy metal efflux protein 4847828 5664373 Spea_3989 Shewanella pealeana ATCC 700345 CzcA family heavy metal efflux protein YP_001503834.1 4844691 D 398579 CDS YP_001503835.1 157963801 5664374 complement(4848365..4849147) 1 NC_009901.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: slo:Shew_3533 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 4849147 5664374 Spea_3990 Shewanella pealeana ATCC 700345 glyoxalase/bleomycin resistance protein/dioxygenase YP_001503835.1 4848365 R 398579 CDS YP_001503836.1 157963802 5664375 4849339..4850529 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sdn:Sden_0245 GGDEF domain; diguanylate cyclase 4850529 5664375 Spea_3991 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503836.1 4849339 D 398579 CDS YP_001503837.1 157963803 5664376 complement(4850613..4851836) 1 NC_009901.1 PFAM: secretion protein HlyD family protein; KEGG: ppr:PBPRB1680 putative multidrug resistance efflux pump; secretion protein HlyD family protein 4851836 5664376 Spea_3992 Shewanella pealeana ATCC 700345 secretion protein HlyD family protein YP_001503837.1 4850613 R 398579 CDS YP_001503838.1 157963804 5664377 complement(4851829..4852176) 1 NC_009901.1 KEGG: ppr:PBPRB1681 putative permease of the major facilitator superfamily; major facilitator superfamily permease 4852176 5664377 Spea_3993 Shewanella pealeana ATCC 700345 major facilitator superfamily permease YP_001503838.1 4851829 R 398579 CDS YP_001503839.1 157963805 5664378 4852314..4853342 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ppr:PBPRB1682 hypothetical AraC-type transcriptional regulator; AraC family transcriptional regulator 4853342 5664378 Spea_3994 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001503839.1 4852314 D 398579 CDS YP_001503840.1 157963806 5664379 complement(4853380..4854636) 1 NC_009901.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter transmembrane; KEGG: slo:Shew_3531 aromatic amino acid transporter; aromatic amino acid transporter 4854636 5664379 Spea_3995 Shewanella pealeana ATCC 700345 aromatic amino acid transporter YP_001503840.1 4853380 R 398579 CDS YP_001503841.1 157963807 5664380 complement(4854636..4857059) 1 NC_009901.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4857059 5664380 Spea_3996 Shewanella pealeana ATCC 700345 glycerol-3-phosphate acyltransferase YP_001503841.1 4854636 R 398579 CDS YP_001503842.1 157963808 5664381 4857468..4858088 1 NC_009901.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 4858088 5664381 Spea_3997 Shewanella pealeana ATCC 700345 LexA repressor YP_001503842.1 4857468 D 398579 CDS YP_001503843.1 157963809 5664382 4858085..4858633 1 NC_009901.1 KEGG: sbm:Shew185_4179 hypothetical protein; hypothetical protein 4858633 5664382 Spea_3998 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503843.1 4858085 D 398579 CDS YP_001503844.1 157963810 5664383 4859111..4860685 1 NC_009901.1 KEGG: slo:Shew_0125 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; cytochrome C oxidase subunit II transmembrane region; cytochrome c oxidase subunit II 4860685 5664383 Spea_3999 Shewanella pealeana ATCC 700345 cytochrome c oxidase subunit II YP_001503844.1 4859111 D 398579 CDS YP_001503845.1 157963811 5664384 4860695..4862299 1 NC_009901.1 KEGG: shn:Shewana3_3992 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase subunit I type; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit I type 4862299 5664384 Spea_4000 Shewanella pealeana ATCC 700345 cytochrome c oxidase subunit I type YP_001503845.1 4860695 D 398579 CDS YP_001503846.1 157963812 5664385 4862302..4862877 1 NC_009901.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 4862877 5664385 Spea_4001 Shewanella pealeana ATCC 700345 cytochrome C oxidase assembly protein YP_001503846.1 4862302 D 398579 CDS YP_001503847.1 157963813 5664386 4862874..4863755 1 NC_009901.1 PFAM: cytochrome c oxidase subunit III; KEGG: slo:Shew_0122 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 4863755 5664386 Spea_4002 Shewanella pealeana ATCC 700345 cytochrome c oxidase subunit III YP_001503847.1 4862874 D 398579 CDS YP_001503848.1 157963814 5664387 4863801..4864727 1 NC_009901.1 KEGG: shw:Sputw3181_0129 hypothetical protein; hypothetical protein 4864727 5664387 Spea_4003 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503848.1 4863801 D 398579 CDS YP_001503849.1 157963815 5664388 4864923..4865465 1 NC_009901.1 KEGG: slo:Shew_0119 hypothetical protein; hypothetical protein 4865465 5664388 Spea_4004 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503849.1 4864923 D 398579 CDS YP_001503850.1 157963816 5664389 4865611..4866594 1 NC_009901.1 PFAM: cytochrome oxidase assembly; KEGG: sdn:Sden_3523 cytochrome oxidase assembly; cytochrome oxidase assembly 4866594 5664389 Spea_4005 Shewanella pealeana ATCC 700345 cytochrome oxidase assembly YP_001503850.1 4865611 D 398579 CDS YP_001503851.1 157963817 5664390 4866661..4867566 1 NC_009901.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 4867566 5664390 Spea_4006 Shewanella pealeana ATCC 700345 protoheme IX farnesyltransferase YP_001503851.1 4866661 D 398579 CDS YP_001503852.1 157963818 5664391 4867601..4868230 1 NC_009901.1 PFAM: electron transport protein SCO1/SenC; KEGG: slo:Shew_0116 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 4868230 5664391 Spea_4007 Shewanella pealeana ATCC 700345 electron transport protein SCO1/SenC YP_001503852.1 4867601 D 398579 CDS YP_001503853.1 157963819 5664392 complement(4868294..4869340) 1 NC_009901.1 PFAM: polysaccharide deacetylase; KEGG: sbl:Sbal_0145 polysaccharide deacetylase; polysaccharide deacetylase 4869340 5664392 Spea_4008 Shewanella pealeana ATCC 700345 polysaccharide deacetylase YP_001503853.1 4868294 R 398579 CDS YP_001503854.1 157963820 5664393 4869359..4870690 1 NC_009901.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sbl:Sbal_0144 MATE efflux family protein; MATE efflux family protein 4870690 5664393 Spea_4009 Shewanella pealeana ATCC 700345 MATE efflux family protein YP_001503854.1 4869359 D 398579 CDS YP_001503855.1 157963821 5664394 complement(4870783..4871361) 1 NC_009901.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 4871361 5664394 Spea_4010 Shewanella pealeana ATCC 700345 putative DNA uptake protein YP_001503855.1 4870783 R 398579 CDS YP_001503856.1 157963822 5664395 4871560..4874112 1 NC_009901.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: slo:Shew_0105 peptidase M14, carboxypeptidase A; peptidase M14 carboxypeptidase A 4874112 5664395 Spea_4011 Shewanella pealeana ATCC 700345 peptidase M14 carboxypeptidase A YP_001503856.1 4871560 D 398579 CDS YP_001503857.1 157963823 5664396 complement(4874147..4874896) 1 NC_009901.1 KEGG: shw:Sputw3181_0113 competence protein ComF; competence protein ComF 4874896 5664396 Spea_4012 Shewanella pealeana ATCC 700345 competence protein ComF YP_001503857.1 4874147 R 398579 CDS YP_001503858.1 157963824 5664397 4874918..4875685 1 NC_009901.1 KEGG: sbm:Shew185_4199 BioH protein; TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; bioH protein 4875685 5664397 Spea_4013 Shewanella pealeana ATCC 700345 bioH protein YP_001503858.1 4874918 D 398579 CDS YP_001503859.1 157963825 5664398 4875808..4876305 1 NC_009901.1 KEGG: saz:Sama_3506 hypothetical protein; hypothetical protein 4876305 5664398 Spea_4014 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503859.1 4875808 D 398579 CDS YP_001503860.1 157963826 5664399 complement(4876362..4878773) 1 NC_009901.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: slo:Shew_3634 RNA binding S1 domain protein; RNA-binding S1 domain-containing protein 4878773 5664399 Spea_4015 Shewanella pealeana ATCC 700345 RNA-binding S1 domain-containing protein YP_001503860.1 4876362 R 398579 CDS YP_001503861.1 157963827 5664400 complement(4878864..4879343) 1 NC_009901.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: stm:STM3503 transcription elongation factor and transcript cleavage; transcription elongation factor GreB 4879343 5664400 Spea_4016 Shewanella pealeana ATCC 700345 transcription elongation factor GreB YP_001503861.1 4878864 R 398579 CDS YP_001503862.1 157963828 5664401 4879682..4880407 1 NC_009901.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 4880407 ompR 5664401 ompR Shewanella pealeana ATCC 700345 osmolarity response regulator YP_001503862.1 4879682 D 398579 CDS YP_001503863.1 157963829 5664402 4880530..4881852 1 NC_009901.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 4881852 envZ 5664402 envZ Shewanella pealeana ATCC 700345 osmolarity sensor protein YP_001503863.1 4880530 D 398579 CDS YP_001503864.1 157963830 5664403 4881979..4883919 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_3904 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4883919 5664403 Spea_4019 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001503864.1 4881979 D 398579 CDS YP_001503865.1 157963831 5664404 complement(4884012..4884986) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: son:SO_3874 transcriptional regulator, LysR family; LysR family transcriptional regulator 4884986 5664404 Spea_4020 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503865.1 4884012 R 398579 CDS YP_001503866.1 157963832 5664405 complement(4885169..4885927) 1 NC_009901.1 KEGG: son:SO_3873 hypothetical protein; hypothetical protein 4885927 5664405 Spea_4021 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503866.1 4885169 R 398579 CDS YP_001503867.1 157963833 5664406 complement(4885978..4887768) 1 NC_009901.1 PFAM: Arylsulfotransferase; KEGG: son:SO_3872 arylsulfate sulfotransferase; arylsulfotransferase 4887768 5664406 Spea_4022 Shewanella pealeana ATCC 700345 arylsulfotransferase YP_001503867.1 4885978 R 398579 CDS YP_001503868.1 157963834 5664407 4888490..4889101 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: son:SO_3871 thiol:disulfide interchange protein, DsbA family; DSBA oxidoreductase 4889101 5664407 Spea_4023 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001503868.1 4888490 D 398579 CDS YP_001503869.1 157963835 5664408 4889111..4889746 1 NC_009901.1 PFAM: Disulphide bond formation protein DsbB; KEGG: son:SO_3870 disulfide bond formation protein; disulfide bond formation protein DsbB 4889746 5664408 Spea_4024 Shewanella pealeana ATCC 700345 disulfide bond formation protein DsbB YP_001503869.1 4889111 D 398579 CDS YP_001503870.1 157963836 5664409 complement(4889945..4890610) 1 NC_009901.1 PFAM: regulatory protein TetR; KEGG: slo:Shew_0277 transcriptional regulator, TetR family; TetR family transcriptional regulator 4890610 5664409 Spea_4025 Shewanella pealeana ATCC 700345 TetR family transcriptional regulator YP_001503870.1 4889945 R 398579 CDS YP_001503871.1 157963837 5664410 4890775..4891521 1 NC_009901.1 KEGG: vfi:VF0719 putative sugar hydrolase; hypothetical protein 4891521 5664410 Spea_4026 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503871.1 4890775 D 398579 CDS YP_001503872.1 157963838 5664411 4891536..4893296 1 NC_009901.1 PFAM: Arylsulfotransferase; KEGG: spt:SPA3941 hypothetical protein; arylsulfotransferase 4893296 5664411 Spea_4027 Shewanella pealeana ATCC 700345 arylsulfotransferase YP_001503872.1 4891536 D 398579 CDS YP_001503873.1 157963839 5664412 4893365..4893976 1 NC_009901.1 PFAM: DSBA oxidoreductase; KEGG: son:SO_3871 thiol:disulfide interchange protein, DsbA family; DSBA oxidoreductase 4893976 5664412 Spea_4028 Shewanella pealeana ATCC 700345 DSBA oxidoreductase YP_001503873.1 4893365 D 398579 CDS YP_001503874.1 157963840 5664413 4893986..4894609 1 NC_009901.1 PFAM: Disulphide bond formation protein DsbB; KEGG: son:SO_3870 disulfide bond formation protein; disulfide bond formation protein DsbB 4894609 5664413 Spea_4029 Shewanella pealeana ATCC 700345 disulfide bond formation protein DsbB YP_001503874.1 4893986 D 398579 CDS YP_001503875.1 157963841 5664414 complement(4894801..4895691) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: slo:Shew_2670 transcriptional regulator, LysR family; LysR family transcriptional regulator 4895691 5664414 Spea_4030 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503875.1 4894801 R 398579 CDS YP_001503876.1 157963842 5664415 complement(4895880..4896818) 1 NC_009901.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: slo:Shew_2671 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 4896818 5664415 Spea_4031 Shewanella pealeana ATCC 700345 alpha/beta hydrolase domain-containing protein YP_001503876.1 4895880 R 398579 CDS YP_001503877.1 157963843 5664416 complement(4896994..4897662) 1 NC_009901.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; carnitine operon protein CaiE 4897662 5664416 Spea_4032 Shewanella pealeana ATCC 700345 carnitine operon protein CaiE YP_001503877.1 4896994 R 398579 CDS YP_001503878.1 157963844 5664417 complement(4897742..4898593) 1 NC_009901.1 PFAM: MaoC domain protein dehydratase; KEGG: drm:Dred_0577 MaoC domain protein dehydratase; 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase 4898593 5664417 Spea_4033 Shewanella pealeana ATCC 700345 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase YP_001503878.1 4897742 R 398579 CDS YP_001503879.1 157963845 5664418 complement(4898687..4899472) 1 NC_009901.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; carnitinyl-CoA dehydratase 4899472 5664418 Spea_4034 Shewanella pealeana ATCC 700345 carnitinyl-CoA dehydratase YP_001503879.1 4898687 R 398579 CDS YP_001503880.1 157963846 5664419 complement(4899535..4901088) 1 NC_009901.1 PFAM: AMP-dependent synthetase and ligase; KEGG: slo:Shew_2673 AMP-dependent synthetase and ligase; putative crotonobetaine/carnitine-CoA ligase 4901088 caiC 5664419 caiC Shewanella pealeana ATCC 700345 putative crotonobetaine/carnitine-CoA ligase YP_001503880.1 4899535 R 398579 CDS YP_001503881.1 157963847 5664420 complement(4901099..4902361) 1 NC_009901.1 catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine; crotonobetainyl-CoA:carnitine CoA-transferase 4902361 5664420 Spea_4036 Shewanella pealeana ATCC 700345 crotonobetainyl-CoA:carnitine CoA-transferase YP_001503881.1 4901099 R 398579 CDS YP_001503882.1 157963848 5664421 complement(4902556..4903692) 1 NC_009901.1 catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; crotonobetainyl-CoA dehydrogenase 4903692 5664421 Spea_4037 Shewanella pealeana ATCC 700345 crotonobetainyl-CoA dehydrogenase YP_001503882.1 4902556 R 398579 CDS YP_001503883.1 157963849 5664422 complement(4903734..4905293) 1 NC_009901.1 catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; L-carnitine/gamma-butyrobetaine antiporter 4905293 5664422 Spea_4038 Shewanella pealeana ATCC 700345 L-carnitine/gamma-butyrobetaine antiporter YP_001503883.1 4903734 R 398579 CDS YP_001503884.1 157963850 5664423 4906269..4907042 1 NC_009901.1 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; putative electron transfer flavoprotein FixA 4907042 5664423 Spea_4039 Shewanella pealeana ATCC 700345 putative electron transfer flavoprotein FixA YP_001503884.1 4906269 D 398579 CDS YP_001503885.1 157963851 5664424 4907056..4907997 1 NC_009901.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: slo:Shew_2678 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 4907997 5664424 Spea_4040 Shewanella pealeana ATCC 700345 electron transfer flavoprotein subunit alpha YP_001503885.1 4907056 D 398579 CDS YP_001503886.1 157963852 5664425 4908089..4909378 1 NC_009901.1 PFAM: monooxygenase FAD-binding; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slo:Shew_2679 FAD dependent oxidoreductase; FAD dependent oxidoreductase 4909378 5664425 Spea_4041 Shewanella pealeana ATCC 700345 FAD dependent oxidoreductase YP_001503886.1 4908089 D 398579 CDS YP_001503887.1 157963853 5664426 4909375..4909662 1 NC_009901.1 KEGG: slo:Shew_2680 putative ferredoxin; putative ferredoxin 4909662 5664426 Spea_4042 Shewanella pealeana ATCC 700345 putative ferredoxin YP_001503887.1 4909375 D 398579 CDS YP_001503888.1 157963854 5664427 4909938..4911296 1 NC_009901.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: slo:Shew_2681 general substrate transporter; general substrate transporter 4911296 5664427 Spea_4043 Shewanella pealeana ATCC 700345 general substrate transporter YP_001503888.1 4909938 D 398579 CDS YP_001503889.1 157963855 5664428 4911516..4912655 1 NC_009901.1 KEGG: slo:Shew_2682 hypothetical protein; hypothetical protein 4912655 5664428 Spea_4044 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503889.1 4911516 D 398579 CDS YP_001503890.1 157963856 5664429 4913065..4914483 1 NC_009901.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: sdn:Sden_2551 magnesium transporter; magnesium transporter 4914483 5664429 Spea_4045 Shewanella pealeana ATCC 700345 magnesium transporter YP_001503890.1 4913065 D 398579 CDS YP_001503891.1 157963857 5664430 complement(4914603..4915862) 1 NC_009901.1 hypothetical protein 4915862 5664430 Spea_4046 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503891.1 4914603 R 398579 CDS YP_001503892.1 157963858 5664431 complement(4916115..4916876) 1 NC_009901.1 PFAM: protein of unknown function DUF548; KEGG: sfr:Sfri_3857 protein of unknown function DUF548; hypothetical protein 4916876 5664431 Spea_4047 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503892.1 4916115 R 398579 CDS YP_001503893.1 157963859 5664432 4917157..4919451 1 NC_009901.1 KEGG: slo:Shew_2521 decaheme cytochrome c MtrF; hypothetical protein 4919451 5664432 Spea_4048 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503893.1 4917157 D 398579 CDS YP_001503894.1 157963860 5664433 4919772..4921013 1 NC_009901.1 PFAM: transcriptional regulator domain protein; KEGG: sbm:Shew185_3867 transcriptional regulator, CadC; transcriptional regulator CadC 4921013 5664433 Spea_4049 Shewanella pealeana ATCC 700345 transcriptional regulator CadC YP_001503894.1 4919772 D 398579 CDS YP_001503895.1 157963861 5664434 4921070..4921912 1 NC_009901.1 PFAM: protein of unknown function DUF519; KEGG: spc:Sputcn32_0098 protein of unknown function DUF519; hypothetical protein 4921912 5664434 Spea_4050 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503895.1 4921070 D 398579 CDS YP_001503896.1 157963862 5664435 complement(4922094..4922333) 1 NC_009901.1 KEGG: son:SO_4342 hypothetical protein; hypothetical protein 4922333 5664435 Spea_4051 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503896.1 4922094 R 398579 CDS YP_001503897.1 157963863 5664436 complement(4922889..4923767) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ppr:PBPRB1939 hypothetical transcriptional regulator; LysR family transcriptional regulator 4923767 5664436 Spea_4052 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001503897.1 4922889 R 398579 CDS YP_001503898.1 157963864 5664437 4924017..4925414 1 NC_009901.1 sodium/drug antiporter; functions as a Na(+)-driven Na(+)/drug antiporter; member of multidrug and toxic compound extrusion (MATE) family; extrudes acriflavines and other compounds by utilizing the sodium gradient; multidrug efflux pump VmrA 4925414 vmrA 5664437 vmrA Shewanella pealeana ATCC 700345 multidrug efflux pump VmrA YP_001503898.1 4924017 D 398579 CDS YP_001503899.1 157963865 5664438 complement(4925574..4926317) 1 NC_009901.1 PFAM: Lytic transglycosylase catalytic; KEGG: shm:Shewmr7_3923 lytic transglycosylase, catalytic; lytic transglycosylase 4926317 5664438 Spea_4054 Shewanella pealeana ATCC 700345 lytic transglycosylase YP_001503899.1 4925574 R 398579 CDS YP_001503900.1 157963866 5664439 complement(4926314..4927336) 1 NC_009901.1 KEGG: slo:Shew_3651 hypothetical protein; hypothetical protein 4927336 5664439 Spea_4055 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503900.1 4926314 R 398579 CDS YP_001503901.1 157963867 5664440 complement(4927424..4927993) 1 NC_009901.1 PFAM: LemA family protein; KEGG: slo:Shew_3652 LemA family protein; LemA family protein 4927993 5664440 Spea_4056 Shewanella pealeana ATCC 700345 LemA family protein YP_001503901.1 4927424 R 398579 CDS YP_001503902.1 157963868 5664441 4929085..4930704 1 NC_009901.1 PFAM: AbgT putative transporter; short chain fatty acid transporter; KEGG: slo:Shew_3654 AbgT putative transporter; putative transporter AbgT 4930704 5664441 Spea_4057 Shewanella pealeana ATCC 700345 putative transporter AbgT YP_001503902.1 4929085 D 398579 CDS YP_001503903.1 157963869 5664442 4931239..4932858 1 NC_009901.1 PFAM: AbgT putative transporter; KEGG: saz:Sama_3559 putative efflux pump component MtrF; putative transporter AbgT 4932858 5664442 Spea_4058 Shewanella pealeana ATCC 700345 putative transporter AbgT YP_001503903.1 4931239 D 398579 CDS YP_001503904.1 157963870 5664443 4933159..4933716 1 NC_009901.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: kpn:KPN_02690 phosphodiesterase; phosphodiesterase 4933716 5664443 Spea_4059 Shewanella pealeana ATCC 700345 phosphodiesterase YP_001503904.1 4933159 D 398579 CDS YP_001503905.1 157963871 5664444 complement(4934084..4937242) 1 NC_009901.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: slo:Shew_0032 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 4937242 5664444 Spea_4060 Shewanella pealeana ATCC 700345 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001503905.1 4934084 R 398579 CDS YP_001503906.1 157963872 5664445 complement(4937252..4938403) 1 NC_009901.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: slo:Shew_0031 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 4938403 5664445 Spea_4061 Shewanella pealeana ATCC 700345 RND family efflux transporter MFP subunit YP_001503906.1 4937252 R 398579 CDS YP_001503907.1 157963873 5664446 complement(4938769..4939458) 1 NC_009901.1 KEGG: sbl:Sbal_0127 conserved hypothetical 3-methyladenine DNA glycosylase; 3-methyladenine DNA glycosylase 4939458 5664446 Spea_4062 Shewanella pealeana ATCC 700345 3-methyladenine DNA glycosylase YP_001503907.1 4938769 R 398579 CDS YP_001503908.1 157963874 5664447 4939601..4940302 1 NC_009901.1 PFAM: Glutathione S-transferase domain; KEGG: son:SO_4697 glutathione S-transferase; glutathione S-transferase domain-containing protein 4940302 5664447 Spea_4063 Shewanella pealeana ATCC 700345 glutathione S-transferase domain-containing protein YP_001503908.1 4939601 D 398579 CDS YP_001503909.1 157963875 5664448 complement(4940533..4941105) 1 NC_009901.1 KEGG: shm:Shewmr7_3934 hypothetical protein; hypothetical protein 4941105 5664448 Spea_4064 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503909.1 4940533 R 398579 CDS YP_001503910.1 157963876 5664449 complement(4941228..4943267) 1 NC_009901.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: slo:Shew_3657 oligopeptidase A; oligopeptidase A 4943267 5664449 Spea_4065 Shewanella pealeana ATCC 700345 oligopeptidase A YP_001503910.1 4941228 R 398579 CDS YP_001503911.1 157963877 5664450 4943450..4944325 1 NC_009901.1 KEGG: slo:Shew_3658 hypothetical protein; hypothetical protein 4944325 5664450 Spea_4066 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503911.1 4943450 D 398579 CDS YP_001503912.1 157963878 5664451 4944484..4944966 1 NC_009901.1 KEGG: sbm:Shew185_4258 hypothetical protein; hypothetical protein 4944966 5664451 Spea_4067 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503912.1 4944484 D 398579 CDS YP_001503913.1 157963879 5664452 4945269..4946624 1 NC_009901.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 4946624 5664452 Spea_4068 Shewanella pealeana ATCC 700345 glutathione reductase YP_001503913.1 4945269 D 398579 CDS YP_001503914.1 157963880 5664453 4946724..4947107 1 NC_009901.1 KEGG: sfr:Sfri_3563 transposase; transposase 4947107 5664453 Spea_4069 Shewanella pealeana ATCC 700345 transposase YP_001503914.1 4946724 D 398579 CDS YP_001503915.1 157963881 5664454 4947224..4947952 1 NC_009901.1 PFAM: Integrase catalytic region; KEGG: sfr:Sfri_3562 integrase, catalytic region; integrase catalytic subunit 4947952 5664454 Spea_4070 Shewanella pealeana ATCC 700345 integrase catalytic subunit YP_001503915.1 4947224 D 398579 CDS YP_001503916.1 157963882 5664455 complement(4948040..4949992) 1 NC_009901.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: vfi:VF1121 BCCT family transporter; choline/carnitine/betaine transporter 4949992 5664455 Spea_4071 Shewanella pealeana ATCC 700345 choline/carnitine/betaine transporter YP_001503916.1 4948040 R 398579 CDS YP_001503917.1 157963883 5664456 complement(4950560..4951660) 1 NC_009901.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ppr:PBPRB1413 putative NADH-dependent flavin oxidoreductase; NADH:flavin oxidoreductase 4951660 5664456 Spea_4072 Shewanella pealeana ATCC 700345 NADH:flavin oxidoreductase YP_001503917.1 4950560 R 398579 CDS YP_001503918.1 157963884 5664457 4952031..4953134 1 NC_009901.1 KEGG: shw:Sputw3181_0952 hypothetical protein; hypothetical protein 4953134 5664457 Spea_4073 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503918.1 4952031 D 398579 CDS YP_001503919.1 157963885 5664458 complement(4954050..4955204) 1 NC_009901.1 KEGG: pin:Ping_2027 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; amidohydrolase 4955204 5664458 Spea_4074 Shewanella pealeana ATCC 700345 amidohydrolase YP_001503919.1 4954050 R 398579 CDS YP_001503920.1 157963886 5664459 complement(4955287..4956273) 1 NC_009901.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rci:RCIX1169 hypothetical protein; hypothetical protein 4956273 5664459 Spea_4075 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503920.1 4955287 R 398579 CDS YP_001503921.1 157963887 5664460 complement(4956313..4957143) 1 NC_009901.1 PFAM: Asp/Glu racemase; KEGG: pin:Ping_2031 Asp/Glu racemase; Asp/Glu racemase 4957143 5664460 Spea_4076 Shewanella pealeana ATCC 700345 Asp/Glu racemase YP_001503921.1 4956313 R 398579 CDS YP_001503922.1 157963888 5664461 complement(4957158..4958324) 1 NC_009901.1 PFAM: creatinase; peptidase M24; KEGG: pin:Ping_2026 peptidase M24; peptidase M24 4958324 5664461 Spea_4077 Shewanella pealeana ATCC 700345 peptidase M24 YP_001503922.1 4957158 R 398579 CDS YP_001503923.1 157963889 5664462 4958664..4959344 1 NC_009901.1 PFAM: YheO domain protein; KEGG: sfr:Sfri_0689 YheO domain protein; YheO domain-containing protein 4959344 5664462 Spea_4078 Shewanella pealeana ATCC 700345 YheO domain-containing protein YP_001503923.1 4958664 D 398579 CDS YP_001503924.1 157963890 5664463 4959364..4959747 1 NC_009901.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: vha:VIBHAR_02784 hypothetical protein; putative endoribonuclease L-PSP 4959747 5664463 Spea_4079 Shewanella pealeana ATCC 700345 putative endoribonuclease L-PSP YP_001503924.1 4959364 D 398579 CDS YP_001503925.1 157963891 5664464 4959855..4961033 1 NC_009901.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate; diaminopropionate ammonia-lyase 4961033 5664464 Spea_4080 Shewanella pealeana ATCC 700345 diaminopropionate ammonia-lyase YP_001503925.1 4959855 D 398579 CDS YP_001503926.1 157963892 5664465 4961634..4962614 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: sbm:Shew185_4296 conserved hypothetical protein 698; hypothetical protein 4962614 5664465 Spea_4081 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503926.1 4961634 D 398579 CDS YP_001503927.1 157963893 5664466 complement(4963119..4963832) 1 NC_009901.1 PFAM: ThiJ/PfpI domain protein; KEGG: slo:Shew_3669 ThiJ/PfpI domain protein; ThiJ/PfpI domain-containing protein 4963832 5664466 Spea_4082 Shewanella pealeana ATCC 700345 ThiJ/PfpI domain-containing protein YP_001503927.1 4963119 R 398579 CDS YP_001503928.1 157963894 5664467 complement(4964040..4965224) 1 NC_009901.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: son:SO_4711 HD domain protein; metal dependent phosphohydrolase 4965224 5664467 Spea_4083 Shewanella pealeana ATCC 700345 metal dependent phosphohydrolase YP_001503928.1 4964040 R 398579 CDS YP_001503929.1 157963895 5664468 complement(4965704..4966462) 1 NC_009901.1 KEGG: slo:Shew_3672 hypothetical protein; hypothetical protein 4966462 5664468 Spea_4084 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503929.1 4965704 R 398579 CDS YP_001503930.1 157963896 5664469 complement(4966547..4967083) 1 NC_009901.1 KEGG: sbm:Shew185_4307 hypothetical protein; hypothetical protein 4967083 5664469 Spea_4085 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503930.1 4966547 R 398579 CDS YP_001503931.1 157963897 5664470 complement(4967080..4967751) 1 NC_009901.1 PFAM: cobalt transport protein; KEGG: sbl:Sbal_0091 cobalt transport protein; cobalt transport protein 4967751 5664470 Spea_4086 Shewanella pealeana ATCC 700345 cobalt transport protein YP_001503931.1 4967080 R 398579 CDS YP_001503932.1 157963898 5664471 complement(4967741..4969105) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3959 ABC transporter related; ABC transporter-like protein 4969105 5664471 Spea_4087 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503932.1 4967741 R 398579 CDS YP_001503933.1 157963899 5664472 complement(4969123..4971075) 1 NC_009901.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbl:Sbal_0089 TonB-dependent receptor, plug; TonB-dependent receptor 4971075 5664472 Spea_4088 Shewanella pealeana ATCC 700345 TonB-dependent receptor YP_001503933.1 4969123 R 398579 CDS YP_001503934.1 157963900 5664473 4971514..4972872 1 NC_009901.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: slo:Shew_3677 isochorismate synthase; isochorismate synthase 4972872 5664473 Spea_4089 Shewanella pealeana ATCC 700345 isochorismate synthase YP_001503934.1 4971514 D 398579 CDS YP_001503935.1 157963901 5664474 4973090..4973749 1 NC_009901.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: shw:Sputw3181_0078 hypothetical protein; hypothetical protein 4973749 5664474 Spea_4090 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503935.1 4973090 D 398579 CDS YP_001503936.1 157963902 5664475 4973872..4974330 1 NC_009901.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shn:Shewana3_4074 acetyltransferase, GNAT family; N-acetyltransferase GCN5 4974330 5664475 Spea_4091 Shewanella pealeana ATCC 700345 N-acetyltransferase GCN5 YP_001503936.1 4973872 D 398579 CDS YP_001503937.1 157963903 5664476 complement(4975105..4977225) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_3681 integral membrane sensor signal transduction histidine kinase; histidine kinase 4977225 5664476 Spea_4092 Shewanella pealeana ATCC 700345 histidine kinase YP_001503937.1 4975105 R 398579 CDS YP_001503938.1 157963904 5664477 complement(4977275..4978648) 1 NC_009901.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: slo:Shew_3682 two component, sigma54 specific, transcriptional regulator, fis family; Fis family two component sigma54 specific transcriptional regulator 4978648 5664477 Spea_4093 Shewanella pealeana ATCC 700345 Fis family two component sigma54 specific transcriptional regulator YP_001503938.1 4977275 R 398579 CDS YP_001503939.1 157963905 5664478 4978937..4979749 1 NC_009901.1 KEGG: slo:Shew_3683 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4979749 5664478 Spea_4094 Shewanella pealeana ATCC 700345 extracellular solute-binding protein YP_001503939.1 4978937 D 398579 CDS YP_001503940.1 157963906 5664479 4979746..4980453 1 NC_009901.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slo:Shew_3684 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4980453 5664479 Spea_4095 Shewanella pealeana ATCC 700345 binding-protein-dependent transport system inner membrane protein YP_001503940.1 4979746 D 398579 CDS YP_001503941.1 157963907 5664480 4980459..4981205 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_3685 ABC transporter-related protein; ABC transporter-like protein 4981205 5664480 Spea_4096 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503941.1 4980459 D 398579 CDS YP_001503942.1 157963908 5664481 4981258..4981860 1 NC_009901.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: slo:Shew_3686 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein A 4981860 5664481 Spea_4097 Shewanella pealeana ATCC 700345 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001503942.1 4981258 D 398579 CDS YP_001503943.1 157963909 5664482 4981869..4983668 1 NC_009901.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin binding domain; molybdopterin-guanine dinucleotide biosynthesis MobB region; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: slo:Shew_3687 molybdopterin-guanine dinucleotide biosynthesis protein B; putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA 4983668 5664482 Spea_4098 Shewanella pealeana ATCC 700345 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA YP_001503943.1 4981869 D 398579 CDS YP_001503944.1 157963910 5664483 4983689..4984675 1 NC_009901.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 4984675 5664483 Spea_4099 Shewanella pealeana ATCC 700345 molybdenum cofactor biosynthesis protein A YP_001503944.1 4983689 D 398579 CDS YP_001503945.1 157963911 5664484 complement(4984821..4985825) 1 NC_009901.1 KEGG: vvu:VV2_1156 membrane-fusion protein; membrane-fusion protein 4985825 5664484 Spea_4100 Shewanella pealeana ATCC 700345 membrane-fusion protein YP_001503945.1 4984821 R 398579 CDS YP_001503946.1 157963912 5664485 complement(4986700..4988730) 1 NC_009901.1 SMART: Ig domain protein group 1 domain protein; KEGG: sdn:Sden_2330 Ig-like, group 1; Ig domain-containing protein 4988730 5664485 Spea_4101 Shewanella pealeana ATCC 700345 Ig domain-containing protein YP_001503946.1 4986700 R 398579 CDS YP_001503947.1 157963913 5664486 complement(4989087..4989473) 1 NC_009901.1 hypothetical protein 4989473 5664486 Spea_4102 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503947.1 4989087 R 398579 CDS YP_001503948.1 157963914 5664487 4990869..4991327 1 NC_009901.1 KEGG: shw:Sputw3181_0068 hypothetical protein; hypothetical protein 4991327 5664487 Spea_4103 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503948.1 4990869 D 398579 CDS YP_001503949.1 157963915 5664488 4991397..4992212 1 NC_009901.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4992212 5664488 Spea_4104 Shewanella pealeana ATCC 700345 formamidopyrimidine-DNA glycosylase YP_001503949.1 4991397 D 398579 CDS YP_001503950.1 157963916 5664489 complement(4992251..4992916) 1 NC_009901.1 PFAM: SNARE associated Golgi protein; KEGG: shm:Shewmr7_3976 hypothetical protein; hypothetical protein 4992916 5664489 Spea_4105 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503950.1 4992251 R 398579 CDS YP_001503951.1 157963917 5664490 complement(4993008..4994507) 1 NC_009901.1 KEGG: sfr:Sfri_3925 hypothetical protein; hypothetical protein 4994507 5664490 Spea_4106 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503951.1 4993008 R 398579 CDS YP_001503952.1 157963918 5664491 complement(4994514..4994993) 1 NC_009901.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 4994993 coaD 5664491 coaD Shewanella pealeana ATCC 700345 phosphopantetheine adenylyltransferase YP_001503952.1 4994514 R 398579 CDS YP_001503953.1 157963919 5664492 complement(4995189..4995878) 1 NC_009901.1 TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: sbl:Sbal_0295 pseudouridine synthase Rlu family protein, TIGR01621; pseudouridine synthase Rlu family protein 4995878 5664492 Spea_4108 Shewanella pealeana ATCC 700345 pseudouridine synthase Rlu family protein YP_001503953.1 4995189 R 398579 CDS YP_001503954.1 157963920 5664493 complement(4995928..4997265) 1 NC_009901.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: slo:Shew_0098 integral membrane sensor signal transduction histidine kinase; histidine kinase 4997265 5664493 Spea_4109 Shewanella pealeana ATCC 700345 histidine kinase YP_001503954.1 4995928 R 398579 CDS YP_001503955.1 157963921 5664494 complement(4997234..4997911) 1 NC_009901.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: slo:Shew_0097 two component transcriptional regulator, winged helix family; two component transcriptional regulator 4997911 5664494 Spea_4110 Shewanella pealeana ATCC 700345 two component transcriptional regulator YP_001503955.1 4997234 R 398579 CDS YP_001503956.1 157963922 5664495 complement(4997915..4998436) 1 NC_009901.1 KEGG: shw:Sputw3181_0250 hypothetical protein; hypothetical protein 4998436 5664495 Spea_4111 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503956.1 4997915 R 398579 CDS YP_001503957.1 157963923 5664496 complement(4998479..4998829) 1 NC_009901.1 PFAM: conserved hypothetical protein; KEGG: slo:Shew_0095 conserved hypothetical protein 156; hypothetical protein 4998829 5664496 Spea_4112 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503957.1 4998479 R 398579 CDS YP_001503958.1 157963924 5664497 complement(4998961..5000067) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_0094 ABC transporter-related protein; ABC transporter-like protein 5000067 5664497 Spea_4113 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001503958.1 4998961 R 398579 CDS YP_001503959.1 157963925 5664498 complement(5000048..5000728) 1 NC_009901.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbm:Shew185_0282 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 5000728 5664498 Spea_4114 Shewanella pealeana ATCC 700345 molybdate ABC transporter inner membrane subunit YP_001503959.1 5000048 R 398579 CDS YP_001503960.1 157963926 5664499 complement(5000728..5001507) 1 NC_009901.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: slo:Shew_0092 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 5001507 5664499 Spea_4115 Shewanella pealeana ATCC 700345 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001503960.1 5000728 R 398579 CDS YP_001503961.1 157963927 5664500 complement(5001551..5001997) 1 NC_009901.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: she:Shewmr4_0276 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE protein 5001997 5664500 Spea_4116 Shewanella pealeana ATCC 700345 molybdopterin biosynthesis MoaE protein YP_001503961.1 5001551 R 398579 CDS YP_001503962.1 157963928 5664501 complement(5001999..5002250) 1 NC_009901.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: shn:Shewana3_0276 molybdopterin converting factor, subunit 1; molybdopterin converting factor subunit 1 5002250 5664501 Spea_4117 Shewanella pealeana ATCC 700345 molybdopterin converting factor subunit 1 YP_001503962.1 5001999 R 398579 CDS YP_001503963.1 157963929 5664502 complement(5002259..5002801) 1 NC_009901.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 5002801 moaC 5664502 moaC Shewanella pealeana ATCC 700345 molybdenum cofactor biosynthesis protein MoaC YP_001503963.1 5002259 R 398579 CDS YP_001503964.1 157963930 5664503 complement(5002816..5003340) 1 NC_009901.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: slo:Shew_0088 molybdenum cofactor biosynthesis protein B; molybdenum cofactor biosynthesis protein B 5003340 5664503 Spea_4119 Shewanella pealeana ATCC 700345 molybdenum cofactor biosynthesis protein B YP_001503964.1 5002816 R 398579 CDS YP_001503965.1 157963931 5664504 complement(5003438..5004418) 1 NC_009901.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 5004418 moaA 5664504 moaA Shewanella pealeana ATCC 700345 molybdenum cofactor biosynthesis protein A YP_001503965.1 5003438 R 398579 CDS YP_001503966.1 157963932 5664505 5004800..5006449 1 NC_009901.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: slo:Shew_0086 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 5006449 5664505 Spea_4121 Shewanella pealeana ATCC 700345 electron-transferring-flavoprotein dehydrogenase YP_001503966.1 5004800 D 398579 CDS YP_001503967.1 157963933 5664506 complement(5006569..5006919) 1 NC_009901.1 KEGG: slo:Shew_0084 hypothetical protein; hypothetical protein 5006919 5664506 Spea_4122 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503967.1 5006569 R 398579 CDS YP_001503968.1 157963934 5664507 complement(5006963..5007661) 1 NC_009901.1 PFAM: 3-alpha domain protein; MOSC domain containing protein; KEGG: shw:Sputw3181_0239 MOSC domain containing protein; MOSC domain-containing protein 5007661 5664507 Spea_4123 Shewanella pealeana ATCC 700345 MOSC domain-containing protein YP_001503968.1 5006963 R 398579 CDS YP_001503969.1 157963935 5664508 complement(5007771..5009228) 1 NC_009901.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: sbl:Sbal_0279 diguanylate cyclase; diguanylate cyclase 5009228 5664508 Spea_4124 Shewanella pealeana ATCC 700345 diguanylate cyclase YP_001503969.1 5007771 R 398579 CDS YP_001503970.1 157963936 5664509 complement(5009988..5010830) 1 NC_009901.1 PFAM: PfkB domain protein; KEGG: she:Shewmr4_0267 PfkB domain protein; ribokinase-like domain-containing protein 5010830 5664509 Spea_4125 Shewanella pealeana ATCC 700345 ribokinase-like domain-containing protein YP_001503970.1 5009988 R 398579 CDS YP_001503971.1 157963937 5664510 complement(5011375..5012703) 1 NC_009901.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 5012703 5664510 Spea_4126 Shewanella pealeana ATCC 700345 coproporphyrinogen III oxidase YP_001503971.1 5011375 R 398579 CDS YP_001503972.1 157963938 5664511 complement(5012969..5013952) 1 NC_009901.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sbm:Shew185_4112 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 5013952 5664511 Spea_4127 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit gamma YP_001503972.1 5012969 R 398579 CDS YP_001503973.1 157963939 5664512 complement(5014033..5014602) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: saz:Sama_3608 formate dehydrogenase, iron-sulfur subunit; 4Fe-4S ferredoxin 5014602 5664512 Spea_4128 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503973.1 5014033 R 398579 CDS YP_001503974.1 157963940 5664513 complement(5014632..5017505) 1 NC_009901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: saz:Sama_3609 formate dehydrogenase, alpha subunit; molybdopterin oxidoreductase 5017505 5664513 Spea_4129 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase YP_001503974.1 5014632 R 398579 CDS YP_001503975.1 157963941 5664514 complement(5017524..5017721) 1 NC_009901.1 TIGRFAM: Formate dehydrogenase region TAT target; KEGG: slo:Shew_0062 hypothetical protein; formate dehydrogenase region TAT target 5017721 5664514 Spea_4130 Shewanella pealeana ATCC 700345 formate dehydrogenase region TAT target YP_001503975.1 5017524 R 398579 CDS YP_001503976.1 157963942 5664515 complement(5019053..5020033) 1 NC_009901.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sbm:Shew185_4112 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 5020033 5664515 Spea_4131 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit gamma YP_001503976.1 5019053 R 398579 CDS YP_001503977.1 157963943 5664516 complement(5020109..5020678) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: saz:Sama_3608 formate dehydrogenase, iron-sulfur subunit; 4Fe-4S ferredoxin 5020678 5664516 Spea_4132 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503977.1 5020109 R 398579 CDS YP_001503978.1 157963944 5664517 complement(5020708..5023563) 1 NC_009901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: slo:Shew_0063 molybdopterin oxidoreductase; molybdopterin oxidoreductase 5023563 5664517 Spea_4133 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase YP_001503978.1 5020708 R 398579 CDS YP_001503979.1 157963945 5664518 complement(5023582..5023779) 1 NC_009901.1 TIGRFAM: Formate dehydrogenase region TAT target; KEGG: slo:Shew_0062 hypothetical protein; formate dehydrogenase region TAT target 5023779 5664518 Spea_4134 Shewanella pealeana ATCC 700345 formate dehydrogenase region TAT target YP_001503979.1 5023582 R 398579 CDS YP_001503980.1 157963946 5664519 complement(5024654..5025661) 1 NC_009901.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: slo:Shew_0061 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 5025661 5664519 Spea_4135 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit gamma YP_001503980.1 5024654 R 398579 CDS YP_001503981.1 157963947 5664520 complement(5025715..5026302) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: shw:Sputw3181_3872 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5026302 5664520 Spea_4136 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503981.1 5025715 R 398579 CDS YP_001503982.1 157963948 5664521 complement(5026329..5029178) 1 NC_009901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: slo:Shew_0059 molybdopterin oxidoreductase; molybdopterin oxidoreductase 5029178 5664521 Spea_4137 Shewanella pealeana ATCC 700345 molybdopterin oxidoreductase YP_001503982.1 5026329 R 398579 CDS YP_001503983.1 157963949 5664522 complement(5029194..5029394) 1 NC_009901.1 TIGRFAM: Formate dehydrogenase region TAT target; KEGG: slo:Shew_0058 twin-arginine translocation pathway signal; formate dehydrogenase region TAT target 5029394 5664522 Spea_4138 Shewanella pealeana ATCC 700345 formate dehydrogenase region TAT target YP_001503983.1 5029194 R 398579 CDS YP_001503984.1 157963950 5664523 complement(5029569..5030243) 1 NC_009901.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: slo:Shew_0057 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 5030243 5664523 Spea_4139 Shewanella pealeana ATCC 700345 cytoplasmic chaperone TorD family protein YP_001503984.1 5029569 R 398579 CDS YP_001503985.1 157963951 5664524 complement(5030254..5031933) 1 NC_009901.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: slo:Shew_0056 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 5031933 5664524 Spea_4140 Shewanella pealeana ATCC 700345 4Fe-4S ferredoxin YP_001503985.1 5030254 R 398579 CDS YP_001503986.1 157963952 5664525 complement(5032081..5032731) 1 NC_009901.1 KEGG: spc:Sputcn32_0341 hypothetical protein; hypothetical protein 5032731 5664525 Spea_4141 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503986.1 5032081 R 398579 CDS YP_001503987.1 157963953 5664526 complement(5032728..5033195) 1 NC_009901.1 KEGG: slo:Shew_0054 hypothetical protein; hypothetical protein 5033195 5664526 Spea_4142 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503987.1 5032728 R 398579 CDS YP_001503988.1 157963954 5664527 5033480..5034322 1 NC_009901.1 PFAM: formate dehydrogenase subunit FdhD; KEGG: slo:Shew_0053 formate dehydrogenase, subunit FdhD; formate dehydrogenase subunit FdhD 5034322 5664527 Spea_4143 Shewanella pealeana ATCC 700345 formate dehydrogenase subunit FdhD YP_001503988.1 5033480 D 398579 CDS YP_001503989.1 157963955 5664528 5034370..5035275 1 NC_009901.1 KEGG: slo:Shew_0052 DNA binding domain, excisionase family; DNA-binding domain-containing protein 5035275 5664528 Spea_4144 Shewanella pealeana ATCC 700345 DNA-binding domain-containing protein YP_001503989.1 5034370 D 398579 CDS YP_001503990.1 157963956 5664529 complement(5035287..5035658) 1 NC_009901.1 KEGG: sdn:Sden_1152 hypothetical protein; hypothetical protein 5035658 5664529 Spea_4145 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503990.1 5035287 R 398579 CDS YP_001503991.1 157963957 5664530 complement(5035780..5036922) 1 NC_009901.1 PFAM: protein of unknown function DUF890; KEGG: slo:Shew_3741 protein of unknown function DUF890; putative SAM-dependent methyltransferase 5036922 5664530 Spea_4146 Shewanella pealeana ATCC 700345 putative SAM-dependent methyltransferase YP_001503991.1 5035780 R 398579 CDS YP_001503992.1 157963958 5664531 complement(5036980..5037381) 1 NC_009901.1 PFAM: flagellar basal body-associated protein FliL; KEGG: sfr:Sfri_0049 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL-like protein 5037381 5664531 Spea_4147 Shewanella pealeana ATCC 700345 flagellar basal body-associated protein FliL-like protein YP_001503992.1 5036980 R 398579 CDS YP_001503993.1 157963959 5664532 5037533..5038090 1 NC_009901.1 PFAM: Chorismate lyase; KEGG: sbl:Sbal_4229 chorismate lyase; chorismate lyase 5038090 5664532 Spea_4148 Shewanella pealeana ATCC 700345 chorismate lyase YP_001503993.1 5037533 D 398579 CDS YP_001503994.1 157963960 5664533 complement(5038145..5040961) 1 NC_009901.1 PFAM: PKD domain containing protein; peptidase M6 immune inhibitor A; KEGG: slo:Shew_3744 peptidase M6, immune inhibitor A; peptidase M6 immune inhibitor A 5040961 5664533 Spea_4149 Shewanella pealeana ATCC 700345 peptidase M6 immune inhibitor A YP_001503994.1 5038145 R 398579 CDS YP_001503995.1 157963961 5664534 complement(5040963..5041262) 1 NC_009901.1 KEGG: sdn:Sden_0093 hypothetical protein; hypothetical protein 5041262 5664534 Spea_4150 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503995.1 5040963 R 398579 CDS YP_001503996.1 157963962 5664535 complement(5041406..5043571) 1 NC_009901.1 PFAM: glycoside hydrolase family 37; KEGG: slo:Shew_3745 glycoside hydrolase, family 37; glycoside hydrolase family protein 5043571 5664535 Spea_4151 Shewanella pealeana ATCC 700345 glycoside hydrolase family protein YP_001503996.1 5041406 R 398579 CDS YP_001503997.1 157963963 5664536 complement(5043761..5044357) 1 NC_009901.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: slo:Shew_3746 multiple antibiotic resistance (MarC)-related protein; multiple antibiotic resistance (MarC)-like protein 5044357 5664536 Spea_4152 Shewanella pealeana ATCC 700345 multiple antibiotic resistance (MarC)-like protein YP_001503997.1 5043761 R 398579 CDS YP_001503998.1 157963964 5664537 5044575..5046227 1 NC_009901.1 KEGG: slo:Shew_3747 hypothetical protein; hypothetical protein 5046227 5664537 Spea_4153 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503998.1 5044575 D 398579 CDS YP_001503999.1 157963965 5664538 5046308..5047084 1 NC_009901.1 PFAM: protein of unknown function DUF833; KEGG: slo:Shew_3748 protein of unknown function DUF833; hypothetical protein 5047084 5664538 Spea_4154 Shewanella pealeana ATCC 700345 hypothetical protein YP_001503999.1 5046308 D 398579 CDS YP_001504000.1 157963966 5664539 complement(5047314..5047736) 1 NC_009901.1 KEGG: slo:Shew_3749 hypothetical protein; hypothetical protein 5047736 5664539 Spea_4155 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504000.1 5047314 R 398579 CDS YP_001504001.1 157963967 5664540 5047871..5048422 1 NC_009901.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: slo:Shew_3750 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 5048422 5664540 Spea_4156 Shewanella pealeana ATCC 700345 phospholipid/glycerol acyltransferase YP_001504001.1 5047871 D 398579 CDS YP_001504002.1 157963968 5664541 5048487..5049113 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: slo:Shew_3751 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 5049113 5664541 Spea_4157 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001504002.1 5048487 D 398579 CDS YP_001504003.1 157963969 5664542 complement(5049203..5050462) 1 NC_009901.1 PFAM: MscS Mechanosensitive ion channel; KEGG: shm:Shewmr7_0112 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 5050462 5664542 Spea_4158 Shewanella pealeana ATCC 700345 mechanosensitive ion channel protein MscS YP_001504003.1 5049203 R 398579 CDS YP_001504004.1 157963970 5664543 5050651..5051187 1 NC_009901.1 KEGG: slo:Shew_3753 hypothetical protein; hypothetical protein 5051187 5664543 Spea_4159 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504004.1 5050651 D 398579 CDS YP_001504005.1 157963971 5664544 5051557..5052708 1 NC_009901.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO_A0164 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 5052708 5664544 Spea_4160 Shewanella pealeana ATCC 700345 iron-containing alcohol dehydrogenase YP_001504005.1 5051557 D 398579 CDS YP_001504006.1 157963972 5664545 5052776..5053171 1 NC_009901.1 KEGG: vfi:VF1351 hypothetical protein; hypothetical protein 5053171 5664545 Spea_4161 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504006.1 5052776 D 398579 CDS YP_001504007.1 157963973 5664546 5053349..5054011 1 NC_009901.1 KEGG: slo:Shew_3754 hypothetical protein; hypothetical protein 5054011 5664546 Spea_4162 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504007.1 5053349 D 398579 CDS YP_001504008.1 157963974 5664547 5054242..5054982 1 NC_009901.1 PFAM: protein of unknown function DUF81; KEGG: bce:BC1620 hypothetical membrane protein; hypothetical protein 5054982 5664547 Spea_4163 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504008.1 5054242 D 398579 CDS YP_001504009.1 157963975 5664548 5055063..5056082 1 NC_009901.1 KEGG: bbr:BB4545 D-cysteine desulfhydrase; 1-aminocyclopropane-1-carboxylate deaminase 5056082 5664548 Spea_4164 Shewanella pealeana ATCC 700345 1-aminocyclopropane-1-carboxylate deaminase YP_001504009.1 5055063 D 398579 CDS YP_001504010.1 157963976 5664549 5056193..5057599 1 NC_009901.1 PFAM: Na+/H+ antiporter NhaC; KEGG: dde:Dde_2580 Na+/H+ antiporter family protein; Na+/H+ antiporter NhaC 5057599 5664549 Spea_4165 Shewanella pealeana ATCC 700345 Na+/H+ antiporter NhaC YP_001504010.1 5056193 D 398579 CDS YP_001504011.1 157963977 5664550 5057672..5058058 1 NC_009901.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: vha:VIBHAR_03649 hypothetical protein; putative endoribonuclease L-PSP 5058058 5664550 Spea_4166 Shewanella pealeana ATCC 700345 putative endoribonuclease L-PSP YP_001504011.1 5057672 D 398579 CDS YP_001504012.1 157963978 5664551 complement(5058192..5059094) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sal:Sala_2416 transcriptional regulator, LysR family; LysR family transcriptional regulator 5059094 5664551 Spea_4167 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001504012.1 5058192 R 398579 CDS YP_001504013.1 157963979 5664552 complement(5059501..5061033) 1 NC_009901.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 5061033 5664552 Spea_4168 Shewanella pealeana ATCC 700345 histidine ammonia-lyase YP_001504013.1 5059501 R 398579 CDS YP_001504014.1 157963980 5664553 complement(5061037..5062725) 1 NC_009901.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 5062725 5664553 Spea_4169 Shewanella pealeana ATCC 700345 urocanate hydratase YP_001504014.1 5061037 R 398579 CDS YP_001504015.1 157963981 5664554 complement(5062857..5063561) 1 NC_009901.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: slo:Shew_3758 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor 5063561 5664554 Spea_4170 Shewanella pealeana ATCC 700345 histidine utilization repressor YP_001504015.1 5062857 R 398579 CDS YP_001504016.1 157963982 5664555 5063725..5064969 1 NC_009901.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 5064969 5664555 Spea_4171 Shewanella pealeana ATCC 700345 imidazolonepropionase YP_001504016.1 5063725 D 398579 CDS YP_001504017.1 157963983 5664556 complement(5065347..5066006) 1 NC_009901.1 KEGG: vpa:VPA0799 hypothetical protein; hypothetical protein 5066006 5664556 Spea_4172 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504017.1 5065347 R 398579 CDS YP_001504018.1 157963984 5664557 complement(5065999..5067246) 1 NC_009901.1 SMART: AAA ATPase; KEGG: vpa:VPA0800 hypothetical protein; ATPase AAA 5067246 5664557 Spea_4173 Shewanella pealeana ATCC 700345 ATPase AAA YP_001504018.1 5065999 R 398579 CDS YP_001504019.1 157963985 5664558 complement(5067715..5070093) 1 NC_009901.1 PFAM: protein of unknown function DUF214; KEGG: sus:Acid_5729 protein of unknown function DUF214; hypothetical protein 5070093 5664558 Spea_4174 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504019.1 5067715 R 398579 CDS YP_001504020.1 157963986 5664559 complement(5070083..5070796) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_0308 ABC transporter ATP-binding protein; ABC transporter-like protein 5070796 5664559 Spea_4175 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001504020.1 5070083 R 398579 CDS YP_001504021.1 157963987 5664560 complement(5070783..5072054) 1 NC_009901.1 KEGG: cps:CPS_2118 efflux transporter, RND family, MFP subunit; hypothetical protein 5072054 5664560 Spea_4176 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504021.1 5070783 R 398579 CDS YP_001504022.1 157963988 5664561 5072226..5072699 1 NC_009901.1 hypothetical protein 5072699 5664561 Spea_4177 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504022.1 5072226 D 398579 CDS YP_001504023.1 157963989 5664562 5072934..5073983 1 NC_009901.1 PFAM: Lytic transglycosylase catalytic; KEGG: ilo:IL0198 membrane-bound lytic murein transglycosylase C; lytic transglycosylase 5073983 5664562 Spea_4178 Shewanella pealeana ATCC 700345 lytic transglycosylase YP_001504023.1 5072934 D 398579 CDS YP_001504024.1 157963990 5664563 complement(5074485..5075696) 1 NC_009901.1 KEGG: sfr:Sfri_3965 hypothetical protein; hypothetical protein 5075696 5664563 Spea_4179 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504024.1 5074485 R 398579 CDS YP_001504025.1 157963991 5664564 5076055..5076735 1 NC_009901.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: shm:Shewmr7_0085 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5076735 5664564 Spea_4180 Shewanella pealeana ATCC 700345 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001504025.1 5076055 D 398579 CDS YP_001504026.1 157963992 5664565 complement(5076788..5077741) 1 NC_009901.1 KEGG: shw:Sputw3181_4009 hypothetical protein; hypothetical protein 5077741 5664565 Spea_4181 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504026.1 5076788 R 398579 CDS YP_001504027.1 157963993 5664566 complement(5077868..5078629) 1 NC_009901.1 KEGG: ppr:PBPRB0920 hypothetical protein; hypothetical protein 5078629 5664566 Spea_4182 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504027.1 5077868 R 398579 CDS YP_001504028.1 157963994 5664567 5078750..5079178 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: sdn:Sden_0074 thioesterase superfamily; thioesterase superfamily protein 5079178 5664567 Spea_4183 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001504028.1 5078750 D 398579 CDS YP_001504029.1 157963995 5664568 5079259..5079507 1 NC_009901.1 KEGG: son:SO_0079 hypothetical protein; hypothetical protein 5079507 5664568 Spea_4184 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504029.1 5079259 D 398579 CDS YP_001504030.1 157963996 5664569 complement(5079545..5079949) 1 NC_009901.1 PFAM: thioesterase superfamily protein; KEGG: sfr:Sfri_3970 thioesterase superfamily protein; thioesterase superfamily protein 5079949 5664569 Spea_4185 Shewanella pealeana ATCC 700345 thioesterase superfamily protein YP_001504030.1 5079545 R 398579 CDS YP_001504031.1 157963997 5664570 complement(5080306..5082102) 1 NC_009901.1 PFAM: AMP-dependent synthetase and ligase; KEGG: she:Shewmr4_0078 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 5082102 5664570 Spea_4186 Shewanella pealeana ATCC 700345 AMP-dependent synthetase and ligase YP_001504031.1 5080306 R 398579 CDS YP_001504032.1 157963998 5664571 complement(5082393..5083697) 1 NC_009901.1 KEGG: slo:Shew_3777 hypothetical protein; hypothetical protein 5083697 5664571 Spea_4187 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504032.1 5082393 R 398579 CDS YP_001504033.1 157963999 5664572 complement(5083694..5084536) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sdn:Sden_0070 ABC transporter related; ABC transporter-like protein 5084536 5664572 Spea_4188 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001504033.1 5083694 R 398579 CDS YP_001504034.1 157964000 5664573 complement(5084582..5084956) 1 NC_009901.1 PFAM: regulatory protein GntR HTH; KEGG: slo:Shew_3779 transcriptional regulator, GntR family; GntR family transcriptional regulator 5084956 5664573 Spea_4189 Shewanella pealeana ATCC 700345 GntR family transcriptional regulator YP_001504034.1 5084582 R 398579 CDS YP_001504035.1 157964001 5664574 5085047..5086606 1 NC_009901.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: slo:Shew_3780 TAP domain protein; TAP domain-containing protein 5086606 5664574 Spea_4190 Shewanella pealeana ATCC 700345 TAP domain-containing protein YP_001504035.1 5085047 D 398579 CDS YP_001504036.1 157964002 5664575 5086617..5087351 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_3781 ABC transporter-related protein; ABC transporter-like protein 5087351 5664575 Spea_4191 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001504036.1 5086617 D 398579 CDS YP_001504037.1 157964003 5664576 5087376..5088521 1 NC_009901.1 KEGG: slo:Shew_3782 ABC-2 type transporter; ABC-2 type transporter 5088521 5664576 Spea_4192 Shewanella pealeana ATCC 700345 ABC-2 type transporter YP_001504037.1 5087376 D 398579 CDS YP_001504038.1 157964004 5664577 5088600..5088830 1 NC_009901.1 KEGG: shw:Sputw3181_4024 hypothetical protein; hypothetical protein 5088830 5664577 Spea_4193 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504038.1 5088600 D 398579 CDS YP_001504039.1 157964005 5664578 complement(5088869..5089876) 1 NC_009901.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: slo:Shew_3785 transcriptional regulator, AraC family; AraC family transcriptional regulator 5089876 5664578 Spea_4194 Shewanella pealeana ATCC 700345 AraC family transcriptional regulator YP_001504039.1 5088869 R 398579 CDS YP_001504040.1 157964006 5664579 5090092..5090274 1 NC_009901.1 KEGG: slo:Shew_3786 hypothetical protein; hypothetical protein 5090274 5664579 Spea_4195 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504040.1 5090092 D 398579 CDS YP_001504041.1 157964007 5664580 complement(5090334..5091992) 1 NC_009901.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: ilo:IL2343 methyl-accepting chemotaxis protein (contains HAMP domain); methyl-accepting chemotaxis sensory transducer 5091992 5664580 Spea_4196 Shewanella pealeana ATCC 700345 methyl-accepting chemotaxis sensory transducer YP_001504041.1 5090334 R 398579 CDS YP_001504042.1 157964008 5664581 complement(5092682..5093215) 1 NC_009901.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 5093215 mogA 5664581 mogA Shewanella pealeana ATCC 700345 molybdenum cofactor biosynthesis protein MogA YP_001504042.1 5092682 R 398579 CDS YP_001504043.1 157964009 5664582 5093613..5094890 1 NC_009901.1 KEGG: bth:BT_1162 hypothetical protein; hypothetical protein 5094890 5664582 Spea_4198 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504043.1 5093613 D 398579 CDS YP_001504044.1 157964010 5664583 5094913..5095860 1 NC_009901.1 KEGG: vpa:VP1357 hypothetical protein; hypothetical protein 5095860 5664583 Spea_4199 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504044.1 5094913 D 398579 CDS YP_001504045.1 157964011 5664584 complement(5095957..5096427) 1 NC_009901.1 PFAM: NLP/P60 protein; KEGG: sbm:Shew185_0058 NLP/P60 protein; NLP/P60 protein 5096427 5664584 Spea_4200 Shewanella pealeana ATCC 700345 NLP/P60 protein YP_001504045.1 5095957 R 398579 CDS YP_001504046.1 157964012 5664585 complement(5097036..5098181) 1 NC_009901.1 PFAM: ABC-2 type transporter; KEGG: cps:CPS_1248 ABC transporter, permease protein; ABC-2 type transporter 5098181 5664585 Spea_4201 Shewanella pealeana ATCC 700345 ABC-2 type transporter YP_001504046.1 5097036 R 398579 CDS YP_001504047.1 157964013 5664586 complement(5098178..5099185) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_1249 ABC transporter, ATP-binding protein; ABC transporter-like protein 5099185 5664586 Spea_4202 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001504047.1 5098178 R 398579 CDS YP_001504048.1 157964014 5664587 complement(5099182..5100132) 1 NC_009901.1 KEGG: cps:CPS_1250 conserved hypothetical protein; hypothetical protein 5100132 5664587 Spea_4203 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504048.1 5099182 R 398579 CDS YP_001504049.1 157964015 5664588 complement(5100691..5101287) 1 NC_009901.1 KEGG: vvy:VVA0335 outer membrane protein; outer membrane protein 5101287 5664588 Spea_4204 Shewanella pealeana ATCC 700345 outer membrane protein YP_001504049.1 5100691 R 398579 CDS YP_001504050.1 157964016 5664589 complement(5101289..5102584) 1 NC_009901.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: vvy:VVA0334 agglutination protein; TolC family type I secretion outer membrane protein 5102584 5664589 Spea_4205 Shewanella pealeana ATCC 700345 TolC family type I secretion outer membrane protein YP_001504050.1 5101289 R 398579 CDS YP_001504051.1 157964017 5664590 complement(5102597..5103910) 1 NC_009901.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: vvu:VV2_1516 secretion protein, HlyD family; HlyD family type I secretion membrane fusion protein 5103910 5664590 Spea_4206 Shewanella pealeana ATCC 700345 HlyD family type I secretion membrane fusion protein YP_001504051.1 5102597 R 398579 CDS YP_001504052.1 157964018 5664591 complement(5103907..5106027) 1 NC_009901.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvy:VVA0332 putative RTX toxin secretion ATP-binding protein; ABC transporter-like protein 5106027 5664591 Spea_4207 Shewanella pealeana ATCC 700345 ABC transporter-like protein YP_001504052.1 5103907 R 398579 CDS YP_001504053.1 157964019 5664592 complement(5106024..5116025) 1 NC_009901.1 KEGG: vvu:VV2_1514 autotransporter adhesin; autotransporter adhesin 5116025 5664592 Spea_4208 Shewanella pealeana ATCC 700345 autotransporter adhesin YP_001504053.1 5106024 R 398579 CDS YP_001504054.1 157964020 5664593 complement(5116263..5117177) 1 NC_009901.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: vpa:VPA0216 putative transcription regulator protein; LysR family transcriptional regulator 5117177 5664593 Spea_4209 Shewanella pealeana ATCC 700345 LysR family transcriptional regulator YP_001504054.1 5116263 R 398579 CDS YP_001504055.1 157964021 5664594 5117312..5117770 1 NC_009901.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sfr:Sfri_1566 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 5117770 5664594 Spea_4210 Shewanella pealeana ATCC 700345 glyoxalase/bleomycin resistance protein/dioxygenase YP_001504055.1 5117312 D 398579 CDS YP_001504056.1 157964022 5664595 5117802..5118182 1 NC_009901.1 KEGG: cps:CPS_3499 hypothetical protein; hypothetical protein 5118182 5664595 Spea_4211 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504056.1 5117802 D 398579 CDS YP_001504057.1 157964023 5664596 complement(5118290..5119474) 1 NC_009901.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: slo:Shew_3802 HI0933 family protein; hypothetical protein 5119474 5664596 Spea_4212 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504057.1 5118290 R 398579 CDS YP_001504058.1 157964024 5664597 5119732..5120748 1 NC_009901.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: sdn:Sden_3445 transposase IS116/IS110/IS902; transposase IS116/IS110/IS902 family protein 5120748 5664597 Spea_4213 Shewanella pealeana ATCC 700345 transposase IS116/IS110/IS902 family protein YP_001504058.1 5119732 D 398579 CDS YP_001504059.1 157964025 5664598 complement(5121506..5122525) 1 NC_009901.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 5122525 gpsA 5664598 gpsA Shewanella pealeana ATCC 700345 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001504059.1 5121506 R 398579 CDS YP_001504060.1 157964026 5664599 complement(5122530..5123015) 1 NC_009901.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 5123015 5664599 Spea_4215 Shewanella pealeana ATCC 700345 preprotein translocase subunit SecB YP_001504060.1 5122530 R 398579 CDS YP_001504061.1 157964027 5664600 complement(5123240..5123674) 1 NC_009901.1 PFAM: Rhodanese domain protein; KEGG: slo:Shew_3805 rhodanese domain protein; rhodanese domain-containing protein 5123674 5664600 Spea_4216 Shewanella pealeana ATCC 700345 rhodanese domain-containing protein YP_001504061.1 5123240 R 398579 CDS YP_001504062.1 157964028 5664601 5123913..5125457 1 NC_009901.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 5125457 5664601 Spea_4217 Shewanella pealeana ATCC 700345 phosphoglyceromutase YP_001504062.1 5123913 D 398579 CDS YP_001504063.1 157964029 5664602 5125468..5126601 1 NC_009901.1 PFAM: peptidase M23B; KEGG: slo:Shew_3807 peptidase M23B; peptidase M23B 5126601 5664602 Spea_4218 Shewanella pealeana ATCC 700345 peptidase M23B YP_001504063.1 5125468 D 398579 CDS YP_001504064.1 157964030 5664603 5126635..5127840 1 NC_009901.1 KEGG: slo:Shew_3808 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; SMART: PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 5127840 5664603 Spea_4219 Shewanella pealeana ATCC 700345 carboxyl-terminal protease YP_001504064.1 5126635 D 398579 CDS YP_001504065.1 157964031 5664604 5127847..5128602 1 NC_009901.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: slo:Shew_3809 protein of unknown function DUF610, YibQ; hypothetical protein 5128602 5664604 Spea_4220 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504065.1 5127847 D 398579 CDS YP_001504066.1 157964032 5664605 complement(5128588..5129037) 1 NC_009901.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: shn:Shewana3_0047 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 5129037 5664605 Spea_4221 Shewanella pealeana ATCC 700345 BadM/Rrf2 family transcriptional regulator YP_001504066.1 5128588 R 398579 CDS YP_001504067.1 157964033 5664606 complement(5129088..5129342) 1 NC_009901.1 PFAM: protein of unknown function UPF0153; KEGG: slo:Shew_3811 protein of unknown function UPF0153; hypothetical protein 5129342 5664606 Spea_4222 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504067.1 5129088 R 398579 CDS YP_001504068.1 157964034 5664839 complement(5135594..5137015) 1 NC_009901.1 TIGRFAM: Cytochrome c oxidase cbb3 type accessory protein FixG; KEGG: slo:Shew_3812 4Fe-4S ferredoxin, iron-sulfur binding domain protein; cytochrome c oxidase cbb3 type accessory protein FixG 5137015 5664839 Spea_4223 Shewanella pealeana ATCC 700345 cytochrome c oxidase cbb3 type accessory protein FixG YP_001504068.1 5135594 R 398579 CDS YP_001504069.1 157964035 5664608 5137104..5137457 1 NC_009901.1 KEGG: sbm:Shew185_4357 hypothetical protein; hypothetical protein 5137457 5664608 Spea_4224 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504069.1 5137104 D 398579 CDS YP_001504070.1 157964036 5664609 5137610..5138512 1 NC_009901.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 5138512 5664609 Spea_4225 Shewanella pealeana ATCC 700345 naphthoate synthase YP_001504070.1 5137610 D 398579 CDS YP_001504071.1 157964037 5664610 5138714..5138911 1 NC_009901.1 KEGG: saz:Sama_3636 hypothetical protein; hypothetical protein 5138911 5664610 Spea_4226 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504071.1 5138714 D 398579 CDS YP_001504072.1 157964038 5664611 complement(5138920..5140116) 1 NC_009901.1 PFAM: sodium/hydrogen exchanger; KEGG: slo:Shew_3170 sodium/hydrogen exchanger; sodium/hydrogen exchanger 5140116 5664611 Spea_4227 Shewanella pealeana ATCC 700345 sodium/hydrogen exchanger YP_001504072.1 5138920 R 398579 CDS YP_001504073.1 157964039 5664612 5140657..5141466 1 NC_009901.1 TIGRFAM: phosphate binding protein; KEGG: son:SO_4292 phosphate ABC transporter, periplasmic phosphate-binding protein; phosphate-binding protein 5141466 5664612 Spea_4228 Shewanella pealeana ATCC 700345 phosphate-binding protein YP_001504073.1 5140657 D 398579 CDS YP_001504074.1 157964040 5664613 5141544..5142449 1 NC_009901.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO_4291 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 5142449 5664613 Spea_4229 Shewanella pealeana ATCC 700345 phosphate ABC transporter permease YP_001504074.1 5141544 D 398579 CDS YP_001504075.1 157964041 5664614 5142449..5143300 1 NC_009901.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO_4290 phosphate ABC transporter, permease protein; phosphate ABC transporter permease 5143300 5664614 Spea_4230 Shewanella pealeana ATCC 700345 phosphate ABC transporter permease YP_001504075.1 5142449 D 398579 CDS YP_001504076.1 157964042 5664615 5143311..5144060 1 NC_009901.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate ABC transporter ATP-binding protein 5144060 5664615 Spea_4231 Shewanella pealeana ATCC 700345 phosphate ABC transporter ATP-binding protein YP_001504076.1 5143311 D 398579 CDS YP_001504077.1 157964043 5664616 5144238..5144513 1 NC_009901.1 KEGG: cps:CPS_2434 hypothetical protein; hypothetical protein 5144513 5664616 Spea_4232 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504077.1 5144238 D 398579 CDS YP_001504078.1 157964044 5664617 5144832..5145875 1 NC_009901.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 5145875 5664617 Spea_4233 Shewanella pealeana ATCC 700345 guanosine 5'-monophosphate oxidoreductase YP_001504078.1 5144832 D 398579 CDS YP_001504079.1 157964045 5664618 complement(5146047..5147876) 1 NC_009901.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 5147876 5664618 Spea_4234 Shewanella pealeana ATCC 700345 glucosamine--fructose-6-phosphate aminotransferase YP_001504079.1 5146047 R 398579 CDS YP_001504080.1 157964046 5664619 complement(5147965..5148771) 1 NC_009901.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: she:Shewmr4_3921 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 5148771 5664619 Spea_4235 Shewanella pealeana ATCC 700345 DeoR family transcriptional regulator YP_001504080.1 5147965 R 398579 CDS YP_001504081.1 157964047 5664620 complement(5148872..5151004) 1 NC_009901.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: slo:Shew_3841 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 5151004 5664620 Spea_4236 Shewanella pealeana ATCC 700345 TonB-dependent siderophore receptor YP_001504081.1 5148872 R 398579 CDS YP_001504082.1 157964048 5664621 complement(5151269..5152633) 1 NC_009901.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: slo:Shew_3842 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 5152633 5664621 Spea_4237 Shewanella pealeana ATCC 700345 UDP-N-acetylglucosamine pyrophosphorylase YP_001504082.1 5151269 R 398579 CDS YP_001504083.1 157964049 5664622 complement(5152750..5153106) 1 NC_009901.1 PFAM: DsrE family protein; KEGG: slo:Shew_3843 DsrE family protein; DsrE family protein 5153106 5664622 Spea_4238 Shewanella pealeana ATCC 700345 DsrE family protein YP_001504083.1 5152750 R 398579 CDS YP_001504084.1 157964050 5664623 complement(5153462..5153890) 1 NC_009901.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 5153890 atpC 5664623 atpC Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit epsilon YP_001504084.1 5153462 R 398579 CDS YP_001504085.1 157964051 5664624 complement(5153922..5155298) 1 NC_009901.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 5155298 5664624 Spea_4240 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit beta YP_001504085.1 5153922 R 398579 CDS YP_001504086.1 157964052 5664625 complement(5155334..5156194) 1 NC_009901.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 5156194 5664625 Spea_4241 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit gamma YP_001504086.1 5155334 R 398579 CDS YP_001504087.1 157964053 5664626 complement(5156243..5157784) 1 NC_009901.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 5157784 5664626 Spea_4242 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit alpha YP_001504087.1 5156243 R 398579 CDS YP_001504088.1 157964054 5664627 complement(5157799..5158332) 1 NC_009901.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 5158332 5664627 Spea_4243 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit delta YP_001504088.1 5157799 R 398579 CDS YP_001504089.1 157964055 5664628 complement(5158349..5158819) 1 NC_009901.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 5158819 5664628 Spea_4244 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit B YP_001504089.1 5158349 R 398579 CDS YP_001504090.1 157964056 5664629 complement(5158847..5159104) 1 NC_009901.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 5159104 5664629 Spea_4245 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit C YP_001504090.1 5158847 R 398579 CDS YP_001504091.1 157964057 5664630 complement(5159138..5159968) 1 NC_009901.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 5159968 5664630 Spea_4246 Shewanella pealeana ATCC 700345 F0F1 ATP synthase subunit A YP_001504091.1 5159138 R 398579 CDS YP_001504092.1 157964058 5664631 complement(5159981..5160364) 1 NC_009901.1 PFAM: ATP synthase I chain; KEGG: slo:Shew_3852 ATP synthase I chain; ATP synthase I chain 5160364 5664631 Spea_4247 Shewanella pealeana ATCC 700345 ATP synthase I chain YP_001504092.1 5159981 R 398579 CDS YP_001504093.1 157964059 5664632 complement(5160588..5161472) 1 NC_009901.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: saz:Sama_3652 ParB family protein; parB-like partition protein 5161472 5664632 Spea_4248 Shewanella pealeana ATCC 700345 parB-like partition protein YP_001504093.1 5160588 R 398579 CDS YP_001504094.1 157964060 5664633 complement(5161482..5162270) 1 NC_009901.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: slo:Shew_3854 cobyrinic acid a,c-diamide synthase; cobyrinic acid ac-diamide synthase 5162270 5664633 Spea_4249 Shewanella pealeana ATCC 700345 cobyrinic acid ac-diamide synthase YP_001504094.1 5161482 R 398579 CDS YP_001504095.1 157964061 5664634 complement(5162498..5163121) 1 NC_009901.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 5163121 gidB 5664634 gidB Shewanella pealeana ATCC 700345 16S rRNA methyltransferase GidB YP_001504095.1 5162498 R 398579 CDS YP_001504096.1 157964062 5664635 complement(5163240..5165129) 1 NC_009901.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5165129 5664635 Spea_4251 Shewanella pealeana ATCC 700345 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001504096.1 5163240 R 398579 CDS YP_001504097.1 157964063 5664636 complement(5165587..5166027) 1 NC_009901.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 5166027 5664636 Spea_4252 Shewanella pealeana ATCC 700345 flavodoxin YP_001504097.1 5165587 R 398579 CDS YP_001504098.1 157964064 5664637 5166414..5167382 1 NC_009901.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: ppr:PBPRB1417 hypothetical inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 5167382 5664637 Spea_4253 Shewanella pealeana ATCC 700345 inosine/uridine-preferring nucleoside hydrolase YP_001504098.1 5166414 D 398579 CDS YP_001504099.1 157964065 5664638 complement(5167442..5168086) 1 NC_009901.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sfr:Sfri_3118 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 5168086 5664638 Spea_4254 Shewanella pealeana ATCC 700345 lysine exporter protein LysE/YggA YP_001504099.1 5167442 R 398579 CDS YP_001504100.1 157964066 5664639 5168386..5168916 1 NC_009901.1 KEGG: slo:Shew_0364 MshA, mannose-sensitive haemaglutinin; MshA, mannose-sensitive hemaglutinin 5168916 5664639 Spea_4255 Shewanella pealeana ATCC 700345 MshA, mannose-sensitive hemaglutinin YP_001504100.1 5168386 D 398579 CDS YP_001504101.1 157964067 5664640 complement(5170510..5171871) 1 NC_009901.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 5171871 trmE 5664640 trmE Shewanella pealeana ATCC 700345 tRNA modification GTPase TrmE YP_001504101.1 5170510 R 398579 CDS YP_001504102.1 157964068 5664641 complement(5171988..5173625) 1 NC_009901.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: slo:Shew_3866 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 5173625 5664641 Spea_4257 Shewanella pealeana ATCC 700345 60 kDa inner membrane insertion protein YP_001504102.1 5171988 R 398579 CDS YP_001504103.1 157964069 5664642 complement(5173629..5173883) 1 NC_009901.1 PFAM: protein of unknown function DUF37; KEGG: shw:Sputw3181_4093 protein of unknown function DUF37; hypothetical protein 5173883 5664642 Spea_4258 Shewanella pealeana ATCC 700345 hypothetical protein YP_001504103.1 5173629 R 398579 CDS YP_001504104.1 157964070 5664643 complement(5173850..5174212) 1 NC_009901.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 5174212 rnpA 5664643 rnpA Shewanella pealeana ATCC 700345 ribonuclease P YP_001504104.1 5173850 R 398579 CDS YP_001504105.1 157964071 5664644 complement(5174221..5174358) 1 NC_009901.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 5174358 rpmH 5664644 rpmH Shewanella pealeana ATCC 700345 50S ribosomal protein L34 YP_001504105.1 5174221 R 398579 CDS