-- dump date 20140620_064450 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_001181536.1 146291112 5079955 147..1532 1 NC_009438.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1532 dnaA 5079955 dnaA Shewanella putrefaciens CN-32 chromosomal replication initiation protein YP_001181536.1 147 D 319224 CDS YP_001181537.1 146291113 5081515 1553..2653 1 NC_009438.1 KEGG: shm:Shewmr7_0002 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 2653 5081515 Sputcn32_0002 Shewanella putrefaciens CN-32 DNA polymerase III subunit beta YP_001181537.1 1553 D 319224 CDS YP_001181538.1 146291114 5081478 2850..3932 1 NC_009438.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 3932 recF 5081478 recF Shewanella putrefaciens CN-32 recombination protein F YP_001181538.1 2850 D 319224 CDS YP_001181539.1 146291115 5081479 3949..6366 1 NC_009438.1 KEGG: son:SO0011 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase, subunit B domain protein; ATP-binding region, ATPase domain protein domain protein; TOPRIM domain protein; DNA topoisomerase, type IIA, subunit B, region 2 domain protein; SMART: DNA topoisomerase II; DNA gyrase subunit B 6366 5081479 Sputcn32_0004 Shewanella putrefaciens CN-32 DNA gyrase subunit B YP_001181539.1 3949 D 319224 CDS YP_001181540.1 146291116 5081480 6568..7614 1 NC_009438.1 PFAM: HDOD; KEGG: shm:Shewmr7_0007 putative signal transduction protein; putative signal transduction protein 7614 5081480 Sputcn32_0005 Shewanella putrefaciens CN-32 putative signal transduction protein YP_001181540.1 6568 D 319224 CDS YP_001181541.1 146291117 5081481 complement(7702..9771) 1 NC_009438.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 9771 glyS 5081481 glyS Shewanella putrefaciens CN-32 glycyl-tRNA synthetase subunit beta YP_001181541.1 7702 R 319224 CDS YP_001181542.1 146291118 5081482 complement(9782..10687) 1 NC_009438.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 10687 glyQ 5081482 glyQ Shewanella putrefaciens CN-32 glycyl-tRNA synthetase subunit alpha YP_001181542.1 9782 R 319224 CDS YP_001181543.1 146291119 5081483 10805..11401 1 NC_009438.1 KEGG: shm:Shewmr7_0010 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I 11401 5081483 Sputcn32_0008 Shewanella putrefaciens CN-32 DNA-3-methyladenine glycosylase I YP_001181543.1 10805 D 319224 CDS YP_001181544.1 146291120 5081484 complement(11525..14713) 1 NC_009438.1 PFAM: peptidase S9B, dipeptidylpeptidase IV domain protein; amidohydrolase; WD40 domain protein beta Propeller; KEGG: she:Shewmr4_0011 amidohydrolase; amidohydrolase 14713 5081484 Sputcn32_0009 Shewanella putrefaciens CN-32 amidohydrolase YP_001181544.1 11525 R 319224 CDS YP_001181545.1 146291121 5081485 complement(14935..15387) 1 NC_009438.1 KEGG: she:Shewmr4_0012 hypothetical protein; hypothetical protein 15387 5081485 Sputcn32_0010 Shewanella putrefaciens CN-32 hypothetical protein YP_001181545.1 14935 R 319224 CDS YP_001181546.1 146291122 5081486 complement(15432..15677) 1 NC_009438.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 15677 5081486 Sputcn32_0011 Shewanella putrefaciens CN-32 sulfur transfer protein SirA YP_001181546.1 15432 R 319224 CDS YP_001181547.1 146291123 5081487 complement(15908..17071) 1 NC_009438.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 17071 fadA 5081487 fadA Shewanella putrefaciens CN-32 3-ketoacyl-CoA thiolase YP_001181547.1 15908 R 319224 CDS YP_001181548.1 146291124 5081488 complement(17094..19244) 1 NC_009438.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 19244 fadB 5081488 fadB Shewanella putrefaciens CN-32 multifunctional fatty acid oxidation complex subunit alpha YP_001181548.1 17094 R 319224 CDS YP_001181549.1 146291125 5081489 19735..21057 1 NC_009438.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 21057 5081489 Sputcn32_0014 Shewanella putrefaciens CN-32 proline dipeptidase YP_001181549.1 19735 D 319224 CDS YP_001181550.1 146291126 5081490 21085..21699 1 NC_009438.1 PFAM: protein of unknown function UPF0029; KEGG: shm:Shewmr7_0018 protein of unknown function UPF0029; hypothetical protein 21699 5081490 Sputcn32_0015 Shewanella putrefaciens CN-32 hypothetical protein YP_001181550.1 21085 D 319224 CDS YP_001181551.1 146291127 5081491 21777..23234 1 NC_009438.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: she:Shewmr4_0021 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 23234 5081491 Sputcn32_0016 Shewanella putrefaciens CN-32 TrkH family potassium uptake protein YP_001181551.1 21777 D 319224 CDS YP_001181552.1 146291128 5081492 23237..23761 1 NC_009438.1 KEGG: shm:Shewmr7_0020 protoporphyrinogen oxidase; protoporphyrinogen oxidase 23761 5081492 Sputcn32_0017 Shewanella putrefaciens CN-32 protoporphyrinogen oxidase YP_001181552.1 23237 D 319224 CDS YP_001181553.1 146291129 5081493 complement(23811..24119) 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: shm:Shewmr7_0021 transcriptional regulator, ArsR family; regulatory protein ArsR 24119 5081493 Sputcn32_0018 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001181553.1 23811 R 319224 CDS YP_001181554.1 146291130 5081494 24322..24876 1 NC_009438.1 KEGG: she:Shewmr4_0024 protoporphyrinogen oxidase; protoporphyrinogen oxidase 24876 5081494 Sputcn32_0019 Shewanella putrefaciens CN-32 protoporphyrinogen oxidase YP_001181554.1 24322 D 319224 CDS YP_001181555.1 146291131 5081495 complement(24916..26358) 1 NC_009438.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: she:Shewmr4_0025 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 26358 5081495 Sputcn32_0020 Shewanella putrefaciens CN-32 TrkH family potassium uptake protein YP_001181555.1 24916 R 319224 CDS YP_001181556.1 146291132 5081496 complement(26379..27788) 1 NC_009438.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 27788 trkA 5081496 trkA Shewanella putrefaciens CN-32 potassium transporter peripheral membrane protein YP_001181556.1 26379 R 319224 CDS YP_001181557.1 146291133 5081497 complement(27804..29093) 1 NC_009438.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: she:Shewmr4_0027 sun protein; sun protein 29093 5081497 Sputcn32_0022 Shewanella putrefaciens CN-32 sun protein YP_001181557.1 27804 R 319224 CDS YP_001181558.1 146291134 5081498 complement(29096..30052) 1 NC_009438.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: shm:Shewmr7_0026 methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 30052 5081498 Sputcn32_0023 Shewanella putrefaciens CN-32 methionyl-tRNA formyltransferase YP_001181558.1 29096 R 319224 CDS YP_001181559.1 146291135 5081499 complement(30062..30574) 1 NC_009438.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 30574 def 5081499 def Shewanella putrefaciens CN-32 peptide deformylase YP_001181559.1 30062 R 319224 CDS YP_001181560.1 146291136 5081500 30700..31824 1 NC_009438.1 PFAM: Peptidoglycan-binding LysM; KEGG: shm:Shewmr7_0028 peptidoglycan-binding LysM; peptidoglycan-binding LysM 31824 5081500 Sputcn32_0025 Shewanella putrefaciens CN-32 peptidoglycan-binding LysM YP_001181560.1 30700 D 319224 CDS YP_001181561.1 146291137 5081501 31903..32925 1 NC_009438.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: she:Shewmr4_0031 DNA protecting protein DprA; DNA protecting protein DprA 32925 5081501 Sputcn32_0026 Shewanella putrefaciens CN-32 DNA protecting protein DprA YP_001181561.1 31903 D 319224 CDS YP_001181562.1 146291138 5081502 32928..33401 1 NC_009438.1 PFAM: protein of unknown function DUF494; KEGG: son:SO0035 Smg protein; hypothetical protein 33401 5081502 Sputcn32_0027 Shewanella putrefaciens CN-32 hypothetical protein YP_001181562.1 32928 D 319224 CDS YP_001181563.1 146291139 5081503 33515..34084 1 NC_009438.1 PFAM: DNA topoisomerase, type IA, zn finger domain protein; KEGG: shm:Shewmr7_0031 DNA topoisomerase, type IA, zn finger domain protein; DNA topoisomerase type IA Zn finger domain-containing protein 34084 5081503 Sputcn32_0028 Shewanella putrefaciens CN-32 DNA topoisomerase type IA Zn finger domain-containing protein YP_001181563.1 33515 D 319224 CDS YP_001181564.1 146291140 5078752 34232..34798 1 NC_009438.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: son:SO0037 Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 34798 5078752 Sputcn32_0029 Shewanella putrefaciens CN-32 Sua5/YciO/YrdC/YwlC family protein YP_001181564.1 34232 D 319224 CDS YP_001181565.1 146291141 5078753 34824..35732 1 NC_009438.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 35732 5078753 Sputcn32_0030 Shewanella putrefaciens CN-32 coproporphyrinogen III oxidase YP_001181565.1 34824 D 319224 CDS YP_001181566.1 146291142 5078754 complement(35767..36204) 1 NC_009438.1 PFAM: globin; KEGG: son:SO0039 hypothetical globin; globin 36204 5078754 Sputcn32_0031 Shewanella putrefaciens CN-32 globin YP_001181566.1 35767 R 319224 CDS YP_001181567.1 146291143 5078755 36358..37206 1 NC_009438.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 37206 aroE 5078755 aroE Shewanella putrefaciens CN-32 shikimate 5-dehydrogenase YP_001181567.1 36358 D 319224 CDS YP_001181568.1 146291144 5078756 37212..37487 1 NC_009438.1 PFAM: protein of unknown function DUF1488; KEGG: shm:Shewmr7_0036 protein of unknown function DUF1488; hypothetical protein 37487 5078756 Sputcn32_0033 Shewanella putrefaciens CN-32 hypothetical protein YP_001181568.1 37212 D 319224 CDS YP_001181569.1 146291145 5078757 complement(37621..38169) 1 NC_009438.1 KEGG: shm:Shewmr7_0037 carbonic anhydrase, family 3; carbonic anhydrase 38169 5078757 Sputcn32_0034 Shewanella putrefaciens CN-32 carbonic anhydrase YP_001181569.1 37621 R 319224 CDS YP_001181570.1 146291146 5078762 44241..44495 1 NC_009438.1 PFAM: protein of unknown function UPF0153; KEGG: son:SO0044 hypothetical protein; hypothetical protein 44495 5078762 Sputcn32_0035 Shewanella putrefaciens CN-32 hypothetical protein YP_001181570.1 44241 D 319224 CDS YP_001181571.1 146291147 5078763 44518..44973 1 NC_009438.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: she:Shewmr4_0041 transcriptional regulator, BadM/Rrf2 family; BadM/Rrf2 family transcriptional regulator 44973 5078763 Sputcn32_0036 Shewanella putrefaciens CN-32 BadM/Rrf2 family transcriptional regulator YP_001181571.1 44518 D 319224 CDS YP_001181572.1 146291148 5078764 complement(44959..45702) 1 NC_009438.1 PFAM: protein of unknown function DUF610, YibQ; KEGG: shm:Shewmr7_0040 protein of unknown function DUF610, YibQ; hypothetical protein 45702 5078764 Sputcn32_0037 Shewanella putrefaciens CN-32 hypothetical protein YP_001181572.1 44959 R 319224 CDS YP_001181573.1 146291149 5078765 complement(45712..46920) 1 NC_009438.1 KEGG: she:Shewmr4_0043 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; carboxyl-terminal protease 46920 5078765 Sputcn32_0038 Shewanella putrefaciens CN-32 carboxyl-terminal protease YP_001181573.1 45712 R 319224 CDS YP_001181574.1 146291150 5078766 complement(46950..48083) 1 NC_009438.1 PFAM: peptidase M23B; KEGG: shm:Shewmr7_0042 peptidase M23B; peptidase M23B 48083 5078766 Sputcn32_0039 Shewanella putrefaciens CN-32 peptidase M23B YP_001181574.1 46950 R 319224 CDS YP_001181575.1 146291151 5078767 complement(48094..49638) 1 NC_009438.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 49638 5078767 Sputcn32_0040 Shewanella putrefaciens CN-32 phosphoglyceromutase YP_001181575.1 48094 R 319224 CDS YP_001181576.1 146291152 5078768 49905..50339 1 NC_009438.1 PFAM: Rhodanese domain protein; KEGG: shm:Shewmr7_0044 rhodanese domain protein; rhodanese domain-containing protein 50339 5078768 Sputcn32_0041 Shewanella putrefaciens CN-32 rhodanese domain-containing protein YP_001181576.1 49905 D 319224 CDS YP_001181577.1 146291153 5078769 50598..51083 1 NC_009438.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 51083 5078769 Sputcn32_0042 Shewanella putrefaciens CN-32 preprotein translocase subunit SecB YP_001181577.1 50598 D 319224 CDS YP_001181578.1 146291154 5078770 51088..52104 1 NC_009438.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 52104 gpsA 5078770 gpsA Shewanella putrefaciens CN-32 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_001181578.1 51088 D 319224 CDS YP_001181579.1 146291155 5078771 52525..53709 1 NC_009438.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: she:Shewmr4_0049 HI0933 family protein; hypothetical protein 53709 5078771 Sputcn32_0044 Shewanella putrefaciens CN-32 hypothetical protein YP_001181579.1 52525 D 319224 CDS YP_001181580.1 146291156 5078772 complement(53783..54247) 1 NC_009438.1 KEGG: sde:Sde_2764 hypothetical protein; hypothetical protein 54247 5078772 Sputcn32_0045 Shewanella putrefaciens CN-32 hypothetical protein YP_001181580.1 53783 R 319224 CDS YP_001181581.1 146291157 5078773 complement(54548..55912) 1 NC_009438.1 TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: shm:Shewmr7_0049 potassium uptake protein, TrkH family; TrkH family potassium uptake protein 55912 5078773 Sputcn32_0046 Shewanella putrefaciens CN-32 TrkH family potassium uptake protein YP_001181581.1 54548 R 319224 CDS YP_001181582.1 146291158 5078774 complement(55914..56612) 1 NC_009438.1 PFAM: TrkA-N domain protein; KEGG: shm:Shewmr7_0050 TrkA-N domain protein; TrkA domain-containing protein 56612 5078774 Sputcn32_0047 Shewanella putrefaciens CN-32 TrkA domain-containing protein YP_001181582.1 55914 R 319224 CDS YP_001181583.1 146291159 5078775 complement(56655..57344) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO0059 transcriptional regulatory protein KdpE; two component transcriptional regulator 57344 5078775 Sputcn32_0048 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001181583.1 56655 R 319224 CDS YP_001181584.1 146291160 5078776 complement(57345..58391) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: shm:Shewmr7_0052 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 58391 5078776 Sputcn32_0049 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001181584.1 57345 R 319224 CDS YP_001181585.1 146291161 5078777 complement(58629..59552) 1 NC_009438.1 PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: shm:Shewmr7_0053 pirin domain protein domain protein; pirin domain-containing protein 59552 5078777 Sputcn32_0050 Shewanella putrefaciens CN-32 pirin domain-containing protein YP_001181585.1 58629 R 319224 CDS YP_001181586.1 146291162 5078778 59840..61030 1 NC_009438.1 KEGG: eca:ECA0549 putative plasmid transfer protein; putative plasmid transfer protein 61030 5078778 Sputcn32_0051 Shewanella putrefaciens CN-32 putative plasmid transfer protein YP_001181586.1 59840 D 319224 CDS YP_001181587.1 146291163 5078779 61217..61681 1 NC_009438.1 PFAM: NLP/P60 protein; KEGG: shm:Shewmr7_0059 NLP/P60 protein; NLP/P60 protein 61681 5078779 Sputcn32_0052 Shewanella putrefaciens CN-32 NLP/P60 protein YP_001181587.1 61217 D 319224 CDS YP_001181588.1 146291164 5078780 61972..62505 1 NC_009438.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 62505 mogA 5078780 mogA Shewanella putrefaciens CN-32 molybdenum cofactor biosynthesis protein MogA YP_001181588.1 61972 D 319224 CDS YP_001181589.1 146291165 5078781 complement(62578..62826) 1 NC_009438.1 KEGG: son:SO0068 hypothetical protein; hypothetical protein 62826 5078781 Sputcn32_0054 Shewanella putrefaciens CN-32 hypothetical protein YP_001181589.1 62578 R 319224 CDS YP_001181590.1 146291166 5078782 complement(62906..64045) 1 NC_009438.1 KEGG: son:SO0069 transport protein, putative; transporter 64045 5078782 Sputcn32_0055 Shewanella putrefaciens CN-32 transporter YP_001181590.1 62906 R 319224 CDS YP_001181591.1 146291167 5078783 complement(64128..64862) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0070 ATP-binding transport protein NatA; ABC transporter-like protein 64862 5078783 Sputcn32_0056 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001181591.1 64128 R 319224 CDS YP_001181592.1 146291168 5078784 complement(64866..66506) 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; TAP domain protein; KEGG: she:Shewmr4_0074 TAP domain protein; TAP domain-containing protein 66506 5078784 Sputcn32_0057 Shewanella putrefaciens CN-32 TAP domain-containing protein YP_001181592.1 64866 R 319224 CDS YP_001181593.1 146291169 5078785 66600..66971 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; KEGG: son:SO0072 transcriptional regulator, GntR family; regulatory protein GntR 66971 5078785 Sputcn32_0058 Shewanella putrefaciens CN-32 regulatory protein GntR YP_001181593.1 66600 D 319224 CDS YP_001181594.1 146291170 5078786 67014..67877 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0073 ABC transporter, ATP-binding protein; ABC transporter-like protein 67877 5078786 Sputcn32_0059 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001181594.1 67014 D 319224 CDS YP_001181595.1 146291171 5078787 67874..69190 1 NC_009438.1 KEGG: son:SO0074 hypothetical protein; hypothetical protein 69190 5078787 Sputcn32_0060 Shewanella putrefaciens CN-32 hypothetical protein YP_001181595.1 67874 D 319224 CDS YP_001181596.1 146291172 5078788 69383..71179 1 NC_009438.1 PFAM: AMP-dependent synthetase and ligase; KEGG: she:Shewmr4_0078 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 71179 5078788 Sputcn32_0061 Shewanella putrefaciens CN-32 AMP-dependent synthetase and ligase YP_001181596.1 69383 D 319224 CDS YP_001181597.1 146291173 5078789 71323..73779 1 NC_009438.1 KEGG: she:Shewmr4_0079 MORN variant repeat protein; MORN repeat-containing protein 73779 5078789 Sputcn32_0062 Shewanella putrefaciens CN-32 MORN repeat-containing protein YP_001181597.1 71323 D 319224 CDS YP_001181598.1 146291174 5078790 73905..74315 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_0078 thioesterase superfamily protein; thioesterase superfamily protein 74315 5078790 Sputcn32_0063 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001181598.1 73905 D 319224 CDS YP_001181599.1 146291175 5078791 74439..74987 1 NC_009438.1 PFAM: HPP family protein+B94; KEGG: shm:Shewmr7_0079 HPP family protein; HPP family protein 74987 5078791 Sputcn32_0064 Shewanella putrefaciens CN-32 HPP family protein YP_001181599.1 74439 D 319224 CDS YP_001181600.1 146291176 5078792 complement(74984..75250) 1 NC_009438.1 KEGG: she:Shewmr4_0083 hypothetical protein; hypothetical protein 75250 5078792 Sputcn32_0065 Shewanella putrefaciens CN-32 hypothetical protein YP_001181600.1 74984 R 319224 CDS YP_001181601.1 146291177 5078793 complement(75320..75760) 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_0081 thioesterase superfamily protein; thioesterase superfamily protein 75760 5078793 Sputcn32_0066 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001181601.1 75320 R 319224 CDS YP_001181602.1 146291178 5078794 75872..76267 1 NC_009438.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: shm:Shewmr7_0084 glutathione-dependent formaldehyde-activating, GFA; glutathione-dependent formaldehyde-activating protein 76267 5078794 Sputcn32_0067 Shewanella putrefaciens CN-32 glutathione-dependent formaldehyde-activating protein YP_001181602.1 75872 D 319224 CDS YP_001181603.1 146291179 5078843 76603..77727 1 NC_009438.1 KEGG: sdn:Sden_0075 hypothetical protein; hypothetical protein 77727 5078843 Sputcn32_0068 Shewanella putrefaciens CN-32 hypothetical protein YP_001181603.1 76603 D 319224 CDS YP_001181604.1 146291180 5078844 complement(77797..78477) 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO0084 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 78477 5078844 Sputcn32_0069 Shewanella putrefaciens CN-32 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YP_001181604.1 77797 R 319224 CDS YP_001181605.1 146291181 5078845 78858..79286 1 NC_009438.1 KEGG: son:SO0085 hypothetical protein; hypothetical protein 79286 5078845 Sputcn32_0070 Shewanella putrefaciens CN-32 hypothetical protein YP_001181605.1 78858 D 319224 CDS YP_001181606.1 146291182 5078846 complement(79288..81111) 1 NC_009438.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: csa:Csal_2061 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 81111 5078846 Sputcn32_0071 Shewanella putrefaciens CN-32 glycerophosphoryl diester phosphodiesterase YP_001181606.1 79288 R 319224 CDS YP_001181607.1 146291183 5078847 81271..81615 1 NC_009438.1 hypothetical protein 81615 5078847 Sputcn32_0072 Shewanella putrefaciens CN-32 hypothetical protein YP_001181607.1 81271 D 319224 CDS YP_001181608.1 146291184 5078848 81838..82374 1 NC_009438.1 KEGG: son:SO0090 hypothetical protein; hypothetical protein 82374 5078848 Sputcn32_0073 Shewanella putrefaciens CN-32 hypothetical protein YP_001181608.1 81838 D 319224 CDS YP_001181609.1 146291185 5078849 82489..82845 1 NC_009438.1 KEGG: shm:Shewmr7_0143 hypothetical protein; hypothetical protein 82845 5078849 Sputcn32_0074 Shewanella putrefaciens CN-32 hypothetical protein YP_001181609.1 82489 D 319224 CDS YP_001181610.1 146291186 5078850 83012..83443 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: shm:Shewmr7_0090 transcriptional regulator, MarR family; MarR family transcriptional regulator 83443 5078850 Sputcn32_0075 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001181610.1 83012 D 319224 CDS YP_001181611.1 146291187 5078851 83522..84277 1 NC_009438.1 PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting domain protein; KEGG: shm:Shewmr7_0091 FAD-binding 9, siderophore-interacting domain protein; siderophore-interacting protein 84277 5078851 Sputcn32_0076 Shewanella putrefaciens CN-32 siderophore-interacting protein YP_001181611.1 83522 D 319224 CDS YP_001181612.1 146291188 5078852 complement(84375..85601) 1 NC_009438.1 catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase 85601 5078852 Sputcn32_0077 Shewanella putrefaciens CN-32 imidazolonepropionase YP_001181612.1 84375 R 319224 CDS YP_001181613.1 146291189 5078853 85836..86543 1 NC_009438.1 TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR, HTH; UbiC transcription regulator-associated domain protein; KEGG: she:Shewmr4_0098 transcriptional regulator, histidine utilization repressor, GntR family; histidine utilization repressor 86543 5078853 Sputcn32_0078 Shewanella putrefaciens CN-32 histidine utilization repressor YP_001181613.1 85836 D 319224 CDS YP_001181614.1 146291190 5078854 86685..88352 1 NC_009438.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase 88352 5078854 Sputcn32_0079 Shewanella putrefaciens CN-32 urocanate hydratase YP_001181614.1 86685 D 319224 CDS YP_001181615.1 146291191 5078855 88405..89946 1 NC_009438.1 catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase 89946 5078855 Sputcn32_0080 Shewanella putrefaciens CN-32 histidine ammonia-lyase YP_001181615.1 88405 D 319224 CDS YP_001181616.1 146291192 5078856 complement(90072..91319) 1 NC_009438.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: shm:Shewmr7_3942 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 91319 5078856 Sputcn32_0081 Shewanella putrefaciens CN-32 gamma-glutamyl phosphate reductase YP_001181616.1 90072 R 319224 CDS YP_001181617.1 146291193 5078857 complement(91337..92437) 1 NC_009438.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 92437 5078857 Sputcn32_0082 Shewanella putrefaciens CN-32 gamma-glutamyl kinase YP_001181617.1 91337 R 319224 CDS YP_001181618.1 146291194 5078858 complement(92446..93942) 1 NC_009438.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: shm:Shewmr7_3940 sodium/proline symporter; sodium/proline symporter 93942 5078858 Sputcn32_0083 Shewanella putrefaciens CN-32 sodium/proline symporter YP_001181618.1 92446 R 319224 CDS YP_001181619.1 146291195 5078859 complement(94554..95909) 1 NC_009438.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 95909 5078859 Sputcn32_0084 Shewanella putrefaciens CN-32 glutathione reductase YP_001181619.1 94554 R 319224 CDS YP_001181620.1 146291196 5078860 complement(96040..96594) 1 NC_009438.1 KEGG: son:SO4701 hypothetical protein; hypothetical protein 96594 5078860 Sputcn32_0085 Shewanella putrefaciens CN-32 hypothetical protein YP_001181620.1 96040 R 319224 CDS YP_001181621.1 146291197 5078861 complement(96810..97508) 1 NC_009438.1 KEGG: son:SO4700 hypothetical protein; hypothetical protein 97508 5078861 Sputcn32_0086 Shewanella putrefaciens CN-32 hypothetical protein YP_001181621.1 96810 R 319224 CDS YP_001181622.1 146291198 5078862 97818..99857 1 NC_009438.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: son:SO4699 oligopeptidase A; oligopeptidase A 99857 5078862 Sputcn32_0087 Shewanella putrefaciens CN-32 oligopeptidase A YP_001181622.1 97818 D 319224 CDS YP_001181623.1 146291199 5078863 100033..100563 1 NC_009438.1 KEGG: shm:Shewmr7_3934 hypothetical protein; hypothetical protein 100563 5078863 Sputcn32_0088 Shewanella putrefaciens CN-32 hypothetical protein YP_001181623.1 100033 D 319224 CDS YP_001181624.1 146291200 5078864 complement(100589..101236) 1 NC_009438.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: she:Shewmr4_3840 glutathione S-transferase, N-terminal domain protein; glutathione S-transferase domain-containing protein 101236 5078864 Sputcn32_0089 Shewanella putrefaciens CN-32 glutathione S-transferase domain-containing protein YP_001181624.1 100589 R 319224 CDS YP_001181625.1 146291201 5078865 102007..103152 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: she:Shewmr4_3837 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 103152 5078865 Sputcn32_0090 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001181625.1 102007 D 319224 CDS YP_001181626.1 146291202 5078866 103162..106296 1 NC_009438.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: son:SO4692 AcrB/AcrD/AcrF family protein; hydrophobe/amphiphile efflux-1 (HAE1) family protein 106296 5078866 Sputcn32_0091 Shewanella putrefaciens CN-32 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001181626.1 103162 D 319224 CDS YP_001181627.1 146291203 5078867 106425..106712 1 NC_009438.1 KEGG: she:Shewmr4_3835 hypothetical protein; hypothetical protein 106712 5078867 Sputcn32_0092 Shewanella putrefaciens CN-32 hypothetical protein YP_001181627.1 106425 D 319224 CDS YP_001181628.1 146291204 5078868 106745..107065 1 NC_009438.1 KEGG: shm:Shewmr7_3927 hypothetical protein; hypothetical protein 107065 5078868 Sputcn32_0093 Shewanella putrefaciens CN-32 hypothetical protein YP_001181628.1 106745 D 319224 CDS YP_001181629.1 146291205 5078869 complement(107146..108681) 1 NC_009438.1 PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; KEGG: she:Shewmr4_3833 AbgT putative transporter; transporter AbgT 108681 5078869 Sputcn32_0094 Shewanella putrefaciens CN-32 transporter AbgT YP_001181629.1 107146 R 319224 CDS YP_001181630.1 146291206 5078870 109245..109808 1 NC_009438.1 PFAM: LemA family protein; KEGG: son:SO4662 lemA protein; LemA family protein 109808 5078870 Sputcn32_0095 Shewanella putrefaciens CN-32 LemA family protein YP_001181630.1 109245 D 319224 CDS YP_001181631.1 146291207 5078871 109915..110664 1 NC_009438.1 PFAM: Lytic transglycosylase, catalytic; KEGG: son:SO4660 transglycosylase SLT domain protein; lytic transglycosylase, catalytic 110664 5078871 Sputcn32_0096 Shewanella putrefaciens CN-32 lytic transglycosylase, catalytic YP_001181631.1 109915 D 319224 CDS YP_001181632.1 146291208 5078872 complement(110661..110825) 1 NC_009438.1 KEGG: she:Shewmr4_1960 hypothetical protein; hypothetical protein 110825 5078872 Sputcn32_0097 Shewanella putrefaciens CN-32 hypothetical protein YP_001181632.1 110661 R 319224 CDS YP_001181633.1 146291209 5078873 complement(110989..111834) 1 NC_009438.1 PFAM: protein of unknown function DUF519; KEGG: shm:Shewmr7_3922 protein of unknown function DUF519; hypothetical protein 111834 5078873 Sputcn32_0098 Shewanella putrefaciens CN-32 hypothetical protein YP_001181633.1 110989 R 319224 CDS YP_001181634.1 146291210 5078874 complement(111971..114235) 1 NC_009438.1 PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: pat:Patl_2246 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 114235 5078874 Sputcn32_0099 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001181634.1 111971 R 319224 CDS YP_001181635.1 146291211 5078875 114456..115235 1 NC_009438.1 PFAM: protein of unknown function DUF548; KEGG: shm:Shewmr7_3921 protein of unknown function DUF548; hypothetical protein 115235 5078875 Sputcn32_0100 Shewanella putrefaciens CN-32 hypothetical protein YP_001181635.1 114456 D 319224 CDS YP_001181636.1 146291212 5078876 115816..116181 1 NC_009438.1 hypothetical protein 116181 5078876 Sputcn32_0101 Shewanella putrefaciens CN-32 hypothetical protein YP_001181636.1 115816 D 319224 CDS YP_001181637.1 146291213 5078877 116375..116800 1 NC_009438.1 KEGG: pol:Bpro_1650 hypothetical protein; hypothetical protein 116800 5078877 Sputcn32_0102 Shewanella putrefaciens CN-32 hypothetical protein YP_001181637.1 116375 D 319224 CDS YP_001181638.1 146291214 5078878 116931..117221 1 NC_009438.1 hypothetical protein 117221 5078878 Sputcn32_0103 Shewanella putrefaciens CN-32 hypothetical protein YP_001181638.1 116931 D 319224 CDS YP_001181639.1 146291215 5078879 complement(117266..120436) 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: csa:Csal_2405 acriflavin resistance protein; acriflavin resistance protein 120436 5078879 Sputcn32_0104 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001181639.1 117266 R 319224 CDS YP_001181640.1 146291216 5078880 complement(120441..121487) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: hne:HNE_2191 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 121487 5078880 Sputcn32_0105 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001181640.1 120441 R 319224 CDS YP_001181641.1 146291217 5078881 complement(121532..123718) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rru:Rru_A1440 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 123718 5078881 Sputcn32_0106 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001181641.1 121532 R 319224 CDS YP_001181642.1 146291218 5078882 complement(124135..125457) 1 NC_009438.1 PFAM: peptidase M48, Ste24p; KEGG: son:SO0110 hypothetical protease; peptidase M48, Ste24p 125457 5078882 Sputcn32_0107 Shewanella putrefaciens CN-32 peptidase M48, Ste24p YP_001181642.1 124135 R 319224 CDS YP_001181643.1 146291219 5078883 125794..126432 1 NC_009438.1 KEGG: shm:Shewmr7_0108 hypothetical protein; hypothetical protein 126432 5078883 Sputcn32_0108 Shewanella putrefaciens CN-32 hypothetical protein YP_001181643.1 125794 D 319224 CDS YP_001181644.1 146291220 5078884 126451..126882 1 NC_009438.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppr:PBPRA1918 putative glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 126882 5078884 Sputcn32_0109 Shewanella putrefaciens CN-32 glyoxalase/bleomycin resistance protein/dioxygenase YP_001181644.1 126451 D 319224 CDS YP_001181645.1 146291221 5078885 complement(126879..127505) 1 NC_009438.1 KEGG: shm:Shewmr7_0110 hypothetical protein; hypothetical protein 127505 5078885 Sputcn32_0110 Shewanella putrefaciens CN-32 hypothetical protein YP_001181645.1 126879 R 319224 CDS YP_001181646.1 146291222 5078886 complement(127621..128583) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: yps:YPTB1207 putative transcriptional regulator, LysR family; LysR family transcriptional regulator 128583 5078886 Sputcn32_0111 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001181646.1 127621 R 319224 CDS YP_001181647.1 146291223 5078887 128733..129482 1 NC_009438.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 129482 fabG 5078887 fabG Shewanella putrefaciens CN-32 3-ketoacyl-ACP reductase YP_001181647.1 128733 D 319224 CDS YP_001181648.1 146291224 5078888 129778..130188 1 NC_009438.1 hypothetical protein 130188 5078888 Sputcn32_0113 Shewanella putrefaciens CN-32 hypothetical protein YP_001181648.1 129778 D 319224 CDS YP_001181649.1 146291225 5078889 130468..132579 1 NC_009438.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: vpa:VP2006 putative suppressor for copper-sensitivity B precursor; cytochrome c biogenesis protein, transmembrane region 132579 5078889 Sputcn32_0114 Shewanella putrefaciens CN-32 cytochrome c biogenesis protein, transmembrane region YP_001181649.1 130468 D 319224 CDS YP_001181650.1 146291226 5078890 132749..133573 1 NC_009438.1 PFAM: DSBA oxidoreductase; KEGG: vfi:VF2492 copper sensitivity protein ScsC; DSBA oxidoreductase 133573 5078890 Sputcn32_0115 Shewanella putrefaciens CN-32 DSBA oxidoreductase YP_001181650.1 132749 D 319224 CDS YP_001181651.1 146291227 5078891 133599..134123 1 NC_009438.1 PFAM: Redoxin domain protein; KEGG: ppr:PBPRB1492 hypothetical thioredoxin; redoxin domain-containing protein 134123 5078891 Sputcn32_0116 Shewanella putrefaciens CN-32 redoxin domain-containing protein YP_001181651.1 133599 D 319224 CDS YP_001181652.1 146291228 5078892 134168..134560 1 NC_009438.1 PFAM: protein of unknown function DUF1090; KEGG: son:SO0119 hypothetical protein; hypothetical protein 134560 5078892 Sputcn32_0117 Shewanella putrefaciens CN-32 hypothetical protein YP_001181652.1 134168 D 319224 CDS YP_001181653.1 146291229 5078944 134709..135977 1 NC_009438.1 PFAM: MscS Mechanosensitive ion channel; KEGG: shm:Shewmr7_0112 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 135977 5078944 Sputcn32_0118 Shewanella putrefaciens CN-32 mechanosensitive ion channel protein MscS YP_001181653.1 134709 D 319224 CDS YP_001181654.1 146291230 5078945 complement(135974..136597) 1 NC_009438.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shm:Shewmr7_0113 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 136597 5078945 Sputcn32_0119 Shewanella putrefaciens CN-32 lysine exporter protein LysE/YggA YP_001181654.1 135974 R 319224 CDS YP_001181655.1 146291231 5078946 complement(136618..137181) 1 NC_009438.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: shm:Shewmr7_0114 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 137181 5078946 Sputcn32_0120 Shewanella putrefaciens CN-32 phospholipid/glycerol acyltransferase YP_001181655.1 136618 R 319224 CDS YP_001181656.1 146291232 5078947 137302..137754 1 NC_009438.1 KEGG: shm:Shewmr7_0115 hypothetical protein; hypothetical protein 137754 5078947 Sputcn32_0121 Shewanella putrefaciens CN-32 hypothetical protein YP_001181656.1 137302 D 319224 CDS YP_001181657.1 146291233 5078948 complement(137763..138545) 1 NC_009438.1 PFAM: protein of unknown function DUF833; KEGG: shm:Shewmr7_0116 protein of unknown function DUF833; hypothetical protein 138545 5078948 Sputcn32_0122 Shewanella putrefaciens CN-32 hypothetical protein YP_001181657.1 137763 R 319224 CDS YP_001181658.1 146291234 5078949 complement(138608..140221) 1 NC_009438.1 KEGG: shm:Shewmr7_0117 hypothetical protein; hypothetical protein 140221 5078949 Sputcn32_0123 Shewanella putrefaciens CN-32 hypothetical protein YP_001181658.1 138608 R 319224 CDS YP_001181659.1 146291235 5078950 140628..141221 1 NC_009438.1 PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: son:SO0129 conserved hypothetical protein TIGR00427; multiple antibiotic resistance (MarC)-like protein 141221 5078950 Sputcn32_0124 Shewanella putrefaciens CN-32 multiple antibiotic resistance (MarC)-like protein YP_001181659.1 140628 D 319224 CDS YP_001181660.1 146291236 5078951 141509..144118 1 NC_009438.1 PFAM: PKD domain containing protein; peptidase M6, immune inhibitor A; KEGG: shm:Shewmr7_0119 peptidase M6, immune inhibitor A; peptidase M6, immune inhibitor A 144118 5078951 Sputcn32_0125 Shewanella putrefaciens CN-32 peptidase M6, immune inhibitor A YP_001181660.1 141509 D 319224 CDS YP_001181661.1 146291237 5078952 complement(144195..144755) 1 NC_009438.1 PFAM: Chorismate lyase; KEGG: son:SO0131 putative chorismate--pyruvate lyase; chorismate lyase 144755 5078952 Sputcn32_0126 Shewanella putrefaciens CN-32 chorismate lyase YP_001181661.1 144195 R 319224 CDS YP_001181662.1 146291238 5078953 144870..145292 1 NC_009438.1 PFAM: flagellar basal body-associated protein FliL; KEGG: she:Shewmr4_0127 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL-like protein 145292 5078953 Sputcn32_0127 Shewanella putrefaciens CN-32 flagellar basal body-associated protein FliL-like protein YP_001181662.1 144870 D 319224 CDS YP_001181663.1 146291239 5078954 145349..146422 1 NC_009438.1 PFAM: protein of unknown function DUF890; KEGG: shm:Shewmr7_0122 protein of unknown function DUF890; putative SAM-dependent methyltransferase 146422 5078954 Sputcn32_0128 Shewanella putrefaciens CN-32 putative SAM-dependent methyltransferase YP_001181663.1 145349 D 319224 CDS YP_001181664.1 146291240 5078955 complement(146543..147205) 1 NC_009438.1 KEGG: she:Shewmr4_0130 hypothetical protein; hypothetical protein 147205 5078955 Sputcn32_0129 Shewanella putrefaciens CN-32 hypothetical protein YP_001181664.1 146543 R 319224 CDS YP_001181665.1 146291241 5078956 complement(147273..148031) 1 NC_009438.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 148031 5078956 Sputcn32_0130 Shewanella putrefaciens CN-32 molybdopterin biosynthesis protein MoeB YP_001181665.1 147273 R 319224 CDS YP_001181666.1 146291242 5078957 complement(148044..149297) 1 NC_009438.1 TIGRFAM: molybdenum cofactor synthesis domain; PFAM: molybdopterin binding domain; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: shm:Shewmr7_0126 molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 149297 5078957 Sputcn32_0131 Shewanella putrefaciens CN-32 molybdenum cofactor synthesis domain-containing protein YP_001181666.1 148044 R 319224 CDS YP_001181667.1 146291243 5078958 149639..150175 1 NC_009438.1 PFAM: Ferritin, Dps family protein; KEGG: son:SO0139 ferritin; Ferritin, Dps family protein 150175 5078958 Sputcn32_0132 Shewanella putrefaciens CN-32 Ferritin, Dps family protein YP_001181667.1 149639 D 319224 CDS YP_001181668.1 146291244 5078959 complement(150238..153471) 1 NC_009438.1 KEGG: shm:Shewmr7_0128 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 153471 5078959 Sputcn32_0133 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001181668.1 150238 R 319224 CDS YP_001181669.1 146291245 5078960 complement(154012..154665) 1 NC_009438.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 154665 ribB 5078960 ribB Shewanella putrefaciens CN-32 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001181669.1 154012 R 319224 CDS YP_001181670.1 146291246 5078961 155253..157388 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: she:Shewmr4_0136 oligopeptidase B; oligopeptidase B 157388 5078961 Sputcn32_0135 Shewanella putrefaciens CN-32 oligopeptidase B YP_001181670.1 155253 D 319224 CDS YP_001181671.1 146291247 5078962 157399..157842 1 NC_009438.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: shm:Shewmr7_0131 excinuclease ABC, C subunit domain protein; excinuclease ABC subunit C 157842 5078962 Sputcn32_0136 Shewanella putrefaciens CN-32 excinuclease ABC subunit C YP_001181671.1 157399 D 319224 CDS YP_001181672.1 146291248 5078963 158259..159137 1 NC_009438.1 KEGG: she:Shewmr4_2140 hypothetical protein; hypothetical protein 159137 5078963 Sputcn32_0137 Shewanella putrefaciens CN-32 hypothetical protein YP_001181672.1 158259 D 319224 CDS YP_001181673.1 146291249 5078964 complement(159624..160316) 1 NC_009438.1 hypothetical protein 160316 5078964 Sputcn32_0138 Shewanella putrefaciens CN-32 hypothetical protein YP_001181673.1 159624 R 319224 CDS YP_001181674.1 146291250 5078965 complement(160379..160621) 1 NC_009438.1 KEGG: shm:Shewmr7_0137 hypothetical protein; hypothetical protein 160621 5078965 Sputcn32_0139 Shewanella putrefaciens CN-32 hypothetical protein YP_001181674.1 160379 R 319224 CDS YP_001181675.1 146291251 5078966 complement(160649..160849) 1 NC_009438.1 KEGG: shm:Shewmr7_0137 hypothetical protein; hypothetical protein 160849 5078966 Sputcn32_0140 Shewanella putrefaciens CN-32 hypothetical protein YP_001181675.1 160649 R 319224 CDS YP_001181676.1 146291252 5078967 complement(161124..161897) 1 NC_009438.1 KEGG: shm:Shewmr7_0138 lipoprotein, putative; putative lipoprotein 161897 5078967 Sputcn32_0141 Shewanella putrefaciens CN-32 putative lipoprotein YP_001181676.1 161124 R 319224 CDS YP_001181677.1 146291253 5078968 162172..162939 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_0139 methyltransferase type 11; type 12 methyltransferase 162939 5078968 Sputcn32_0142 Shewanella putrefaciens CN-32 type 12 methyltransferase YP_001181677.1 162172 D 319224 CDS YP_001181678.1 146291254 5078969 complement(162965..164956) 1 NC_009438.1 PFAM: peptidase M14, carboxypeptidase A; KEGG: she:Shewmr4_0145 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 164956 5078969 Sputcn32_0143 Shewanella putrefaciens CN-32 peptidase M14, carboxypeptidase A YP_001181678.1 162965 R 319224 CDS YP_001181679.1 146291255 5078970 complement(165116..166231) 1 NC_009438.1 KEGG: shm:Shewmr7_0141 hypothetical protein; hypothetical protein 166231 5078970 Sputcn32_0144 Shewanella putrefaciens CN-32 hypothetical protein YP_001181679.1 165116 R 319224 CDS YP_001181680.1 146291256 5078971 complement(166470..167720) 1 NC_009438.1 PFAM: sodium:dicarboxylate symporter; KEGG: she:Shewmr4_0147 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 167720 5078971 Sputcn32_0145 Shewanella putrefaciens CN-32 sodium:dicarboxylate symporter YP_001181680.1 166470 R 319224 CDS YP_001181681.1 146291257 5078972 complement(168175..168672) 1 NC_009438.1 hypothetical protein 168672 5078972 Sputcn32_0146 Shewanella putrefaciens CN-32 hypothetical protein YP_001181681.1 168175 R 319224 CDS YP_001181682.1 146291258 5078973 complement(168674..170233) 1 NC_009438.1 PFAM: AbgT putative transporter; short chain fatty acid transporter; KEGG: son:SO0160 transporter, putative; transporter AbgT 170233 5078973 Sputcn32_0147 Shewanella putrefaciens CN-32 transporter AbgT YP_001181682.1 168674 R 319224 CDS YP_001181683.1 146291259 5078974 170535..172130 1 NC_009438.1 KEGG: gme:Gmet_1465 hypothetical protein; hypothetical protein 172130 5078974 Sputcn32_0148 Shewanella putrefaciens CN-32 hypothetical protein YP_001181683.1 170535 D 319224 CDS YP_001181684.1 146291260 5078975 complement(172225..175374) 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: son:SOA0153 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 175374 5078975 Sputcn32_0149 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001181684.1 172225 R 319224 CDS YP_001181685.1 146291261 5078976 complement(175384..176913) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SOA0154 heavy metal efflux protein, putative; RND family efflux transporter MFP subunit 176913 5078976 Sputcn32_0150 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001181685.1 175384 R 319224 CDS YP_001181686.1 146291262 5078977 complement(176935..177195) 1 NC_009438.1 KEGG: she:Shewmr4_3781 copper-transporting ATPase domain protein; copper-transporting ATPase domain-containing protein 177195 5078977 Sputcn32_0151 Shewanella putrefaciens CN-32 copper-transporting ATPase domain-containing protein YP_001181686.1 176935 R 319224 CDS YP_001181687.1 146291263 5078978 complement(177414..177911) 1 NC_009438.1 KEGG: son:SOA0156 hypothetical protein; hypothetical protein 177911 5078978 Sputcn32_0152 Shewanella putrefaciens CN-32 hypothetical protein YP_001181687.1 177414 R 319224 CDS YP_001181688.1 146291264 5078979 complement(177983..178408) 1 NC_009438.1 KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family; phage integrase family site specific recombinase 178408 5078979 Sputcn32_0153 Shewanella putrefaciens CN-32 phage integrase family site specific recombinase YP_001181688.1 177983 R 319224 CDS YP_001181689.1 146291265 5078980 178519..179223 1 NC_009438.1 KEGG: neu:NE0385 site-specific DNA-methyltransferase, type I modification; site-specific DNA-methyltransferase, type I modification 179223 5078980 Sputcn32_0154 Shewanella putrefaciens CN-32 site-specific DNA-methyltransferase, type I modification YP_001181689.1 178519 D 319224 CDS YP_001181690.1 146291266 5078981 complement(179220..180854) 1 NC_009438.1 SMART: AAA ATPase; KEGG: bps:BPSL3342 putative bacteriophage protein; ATPase AAA 180854 5078981 Sputcn32_0155 Shewanella putrefaciens CN-32 ATPase AAA YP_001181690.1 179220 R 319224 CDS YP_001181691.1 146291267 5078982 complement(180847..181659) 1 NC_009438.1 PFAM: protein of unknown function DUF45; KEGG: yps:YPTB3878 putative predicted metal-dependent hydrolase; hypothetical protein 181659 5078982 Sputcn32_0156 Shewanella putrefaciens CN-32 hypothetical protein YP_001181691.1 180847 R 319224 CDS YP_001181692.1 146291268 5078983 complement(181665..184955) 1 NC_009438.1 KEGG: yps:YPTB3879 possible type I restriction enzyme (restriction subunit); TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 184955 5078983 Sputcn32_0157 Shewanella putrefaciens CN-32 HsdR family type I site-specific deoxyribonuclease YP_001181692.1 181665 R 319224 CDS YP_001181693.1 146291269 5078984 complement(184966..186303) 1 NC_009438.1 PFAM: KAP P-loop domain protein; KEGG: vpa:VP2903 hypothetical protein; KAP P-loop domain-containing protein 186303 5078984 Sputcn32_0158 Shewanella putrefaciens CN-32 KAP P-loop domain-containing protein YP_001181693.1 184966 R 319224 CDS YP_001181694.1 146291270 5078985 complement(186313..187701) 1 NC_009438.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 187701 5078985 Sputcn32_0159 Shewanella putrefaciens CN-32 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001181694.1 186313 R 319224 CDS YP_001181695.1 146291271 5078986 complement(187701..188900) 1 NC_009438.1 PFAM: restriction modification system DNA specificity domain; KEGG: tde:TDE0368 type I restriction-modification system, S subunit, putative; restriction modification system DNA specificity subunit 188900 5078986 Sputcn32_0160 Shewanella putrefaciens CN-32 restriction modification system DNA specificity subunit YP_001181695.1 187701 R 319224 CDS YP_001181696.1 146291272 5079038 complement(188890..190410) 1 NC_009438.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: dvu:DVU1709 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 190410 5079038 Sputcn32_0161 Shewanella putrefaciens CN-32 type I restriction-modification system, M subunit YP_001181696.1 188890 R 319224 CDS YP_001181697.1 146291273 5079039 complement(190451..191065) 1 NC_009438.1 KEGG: xcb:XC_1208 hypothetical protein; hypothetical protein 191065 5079039 Sputcn32_0162 Shewanella putrefaciens CN-32 hypothetical protein YP_001181697.1 190451 R 319224 CDS YP_001181698.1 146291274 5079040 191300..191968 1 NC_009438.1 hypothetical protein 191968 5079040 Sputcn32_0163 Shewanella putrefaciens CN-32 hypothetical protein YP_001181698.1 191300 D 319224 CDS YP_001181699.1 146291275 5079041 complement(192103..192444) 1 NC_009438.1 KEGG: ana:alr8025 unknown protein; hypothetical protein 192444 5079041 Sputcn32_0164 Shewanella putrefaciens CN-32 hypothetical protein YP_001181699.1 192103 R 319224 CDS YP_001181700.1 146291276 5079042 complement(192454..193425) 1 NC_009438.1 SMART: AAA ATPase; KEGG: psp:PSPPH_B0059 ExeA-like protein; ATPase AAA 193425 5079042 Sputcn32_0165 Shewanella putrefaciens CN-32 ATPase AAA YP_001181700.1 192454 R 319224 CDS YP_001181701.1 146291277 5079043 complement(193415..195076) 1 NC_009438.1 KEGG: stm:PSLT044 putative integrase protein; putative integrase protein 195076 5079043 Sputcn32_0166 Shewanella putrefaciens CN-32 putative integrase protein YP_001181701.1 193415 R 319224 CDS YP_001181702.1 146291278 5079044 complement(195081..195671) 1 NC_009438.1 PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: xac:XACb0071 Tn5045 resolvase; resolvase domain-containing protein 195671 5079044 Sputcn32_0167 Shewanella putrefaciens CN-32 resolvase domain-containing protein YP_001181702.1 195081 R 319224 CDS YP_001181703.1 146291279 5079045 complement(195909..197561) 1 NC_009438.1 TIGRFAM: mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; Heavy metal transport/detoxification protein; KEGG: sfr:Sfri_3488 mercuric reductase; putative mercuric reductase 197561 5079045 Sputcn32_0168 Shewanella putrefaciens CN-32 putative mercuric reductase YP_001181703.1 195909 R 319224 CDS YP_001181704.1 146291280 5079046 complement(197674..197949) 1 NC_009438.1 TIGRFAM: mercuric transport protein periplasmic component; PFAM: Heavy metal transport/detoxification protein; KEGG: sfr:Sfri_3490 mercuric transport protein periplasmic component; mercuric transport periplasmic protein 197949 5079046 Sputcn32_0169 Shewanella putrefaciens CN-32 mercuric transport periplasmic protein YP_001181704.1 197674 R 319224 CDS YP_001181705.1 146291281 5079047 complement(198002..198349) 1 NC_009438.1 PFAM: Mercuric transport protein MerT; KEGG: sfr:Sfri_3491 mercuric transport protein MerT; mercuric transporter MerT 198349 5079047 Sputcn32_0170 Shewanella putrefaciens CN-32 mercuric transporter MerT YP_001181705.1 198002 R 319224 CDS YP_001181706.1 146291282 5079048 complement(198429..198833) 1 NC_009438.1 TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: sfr:Sfri_3492 transcriptional regulator, MerR family protein; MerR family transcriptional regulator 198833 5079048 Sputcn32_0171 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001181706.1 198429 R 319224 CDS YP_001181707.1 146291283 5079049 complement(199130..199786) 1 NC_009438.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: son:SOA0012 umuC protein; DNA-repair protein 199786 5079049 Sputcn32_0172 Shewanella putrefaciens CN-32 DNA-repair protein YP_001181707.1 199130 R 319224 CDS YP_001181708.1 146291284 5079050 complement(199833..200648) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vpa:VP1787 putative transposase; integrase catalytic subunit 200648 5079050 Sputcn32_0173 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001181708.1 199833 R 319224 CDS YP_001181709.1 146291285 5079051 complement(200699..200983) 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vpa:VP1788 putative transposase; transposase IS3/IS911 family protein 200983 5079051 Sputcn32_0174 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001181709.1 200699 R 319224 CDS YP_001181710.1 146291286 5079052 complement(201013..201438) 1 NC_009438.1 PFAM: peptidase S24, S26A and S26B; KEGG: son:SOA0013 umuD protein; putative prophage repressor 201438 5079052 Sputcn32_0175 Shewanella putrefaciens CN-32 putative prophage repressor YP_001181710.1 201013 R 319224 CDS YP_001181711.1 146291287 5079053 complement(201597..201944) 1 NC_009438.1 KEGG: psp:PSPPH_A0095 plasmid stabilization system protein, RelE/ParE family; hypothetical protein 201944 5079053 Sputcn32_0176 Shewanella putrefaciens CN-32 hypothetical protein YP_001181711.1 201597 R 319224 CDS YP_001181712.1 146291288 5079054 complement(201946..202203) 1 NC_009438.1 TIGRFAM: prevent-host-death family protein; KEGG: vpa:VP1886 hypothetical protein; prevent-host-death family protein 202203 5079054 Sputcn32_0177 Shewanella putrefaciens CN-32 prevent-host-death family protein YP_001181712.1 201946 R 319224 CDS YP_001181713.1 146291289 5079055 complement(202826..203458) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: jan:Jann_1536 phage integrase; phage integrase family protein 203458 5079055 Sputcn32_0178 Shewanella putrefaciens CN-32 phage integrase family protein YP_001181713.1 202826 R 319224 CDS YP_001181714.1 146291290 5079056 complement(203703..204530) 1 NC_009438.1 KEGG: gme:Gmet_2490 hypothetical protein; hypothetical protein 204530 5079056 Sputcn32_0179 Shewanella putrefaciens CN-32 hypothetical protein YP_001181714.1 203703 R 319224 CDS YP_001181715.1 146291291 5079057 complement(204634..205059) 1 NC_009438.1 hypothetical protein 205059 5079057 Sputcn32_0180 Shewanella putrefaciens CN-32 hypothetical protein YP_001181715.1 204634 R 319224 CDS YP_001181716.1 146291292 5079058 205738..206073 1 NC_009438.1 KEGG: son:SOA0069 hypothetical protein; hypothetical protein 206073 5079058 Sputcn32_0181 Shewanella putrefaciens CN-32 hypothetical protein YP_001181716.1 205738 D 319224 CDS YP_001181717.1 146291293 5079059 206070..206357 1 NC_009438.1 KEGG: son:SOA0068 putative transcriptional regulator; putative transcriptional regulator 206357 5079059 Sputcn32_0182 Shewanella putrefaciens CN-32 putative transcriptional regulator YP_001181717.1 206070 D 319224 CDS YP_001181718.1 146291294 5079060 complement(206732..207031) 1 NC_009438.1 hypothetical protein 207031 5079060 Sputcn32_0183 Shewanella putrefaciens CN-32 hypothetical protein YP_001181718.1 206732 R 319224 CDS YP_001181719.1 146291295 5079061 complement(207047..207349) 1 NC_009438.1 hypothetical protein 207349 5079061 Sputcn32_0184 Shewanella putrefaciens CN-32 hypothetical protein YP_001181719.1 207047 R 319224 CDS YP_001181720.1 146291296 5079062 207856..208014 1 NC_009438.1 KEGG: eca:ECA2757 hypothetical protein; hypothetical protein 208014 5079062 Sputcn32_0185 Shewanella putrefaciens CN-32 hypothetical protein YP_001181720.1 207856 D 319224 CDS YP_001181721.1 146291297 5079063 208506..209996 1 NC_009438.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sfr:Sfri_0790 sulphate transporter; sulfate transporter 209996 5079063 Sputcn32_0186 Shewanella putrefaciens CN-32 sulfate transporter YP_001181721.1 208506 D 319224 CDS YP_001181722.1 146291298 5079064 210031..210885 1 NC_009438.1 PFAM: UspA domain protein; KEGG: sfr:Sfri_0791 UspA domain protein; UspA domain-containing protein 210885 5079064 Sputcn32_0187 Shewanella putrefaciens CN-32 UspA domain-containing protein YP_001181722.1 210031 D 319224 CDS YP_001181723.1 146291299 5079065 210976..211308 1 NC_009438.1 KEGG: sil:SPO2248 DnaK suppressor protein, putative; TraR/DksA family transcriptional regulator 211308 5079065 Sputcn32_0188 Shewanella putrefaciens CN-32 TraR/DksA family transcriptional regulator YP_001181723.1 210976 D 319224 CDS YP_001181724.1 146291300 5079066 complement(211426..212046) 1 NC_009438.1 PFAM: Resolvase, N-terminal domain; KEGG: sfr:Sfri_3477 resolvase, N-terminal domain protein; resolvase domain-containing protein 212046 5079066 Sputcn32_0189 Shewanella putrefaciens CN-32 resolvase domain-containing protein YP_001181724.1 211426 R 319224 CDS YP_001181725.1 146291301 5079067 212216..212476 1 NC_009438.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: sfr:Sfri_3472 prevent-host-death family protein; prevent-host-death family protein 212476 5079067 Sputcn32_0190 Shewanella putrefaciens CN-32 prevent-host-death family protein YP_001181725.1 212216 D 319224 CDS YP_001181726.1 146291302 5079068 212476..212787 1 NC_009438.1 PFAM: plasmid stabilization system; KEGG: sfr:Sfri_3471 plasmid stabilization system; plasmid stabilization system protein 212787 5079068 Sputcn32_0191 Shewanella putrefaciens CN-32 plasmid stabilization system protein YP_001181726.1 212476 D 319224 CDS YP_001181727.1 146291303 5079069 212811..215891 1 NC_009438.1 PFAM: transposase Tn3 family protein; KEGG: sfr:Sfri_3470 transposase Tn3 family protein; transposase Tn3 family protein 215891 5079069 Sputcn32_0192 Shewanella putrefaciens CN-32 transposase Tn3 family protein YP_001181727.1 212811 D 319224 CDS YP_001181728.1 146291304 5079070 215929..216621 1 NC_009438.1 KEGG: pol:Bpro_2488 cointegrate resolution protein T; cointegrate resolution protein T 216621 5079070 Sputcn32_0193 Shewanella putrefaciens CN-32 cointegrate resolution protein T YP_001181728.1 215929 D 319224 CDS YP_001181729.1 146291305 5079071 complement(216839..217246) 1 NC_009438.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: abo:ABO_1367 transcriptional regulator, MerR family; MerR family transcriptional regulator 217246 5079071 Sputcn32_0194 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001181729.1 216839 R 319224 CDS YP_001181730.1 146291306 5079072 217342..218238 1 NC_009438.1 KEGG: abo:ABO_1368 cation efflux system permease, putative; cation efflux system permease 218238 5079072 Sputcn32_0195 Shewanella putrefaciens CN-32 cation efflux system permease YP_001181730.1 217342 D 319224 CDS YP_001181731.1 146291307 5079073 218242..218754 1 NC_009438.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 218754 5079073 Sputcn32_0196 Shewanella putrefaciens CN-32 lipoprotein signal peptidase YP_001181731.1 218242 D 319224 CDS YP_001181732.1 146291308 5079074 218776..220065 1 NC_009438.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase, TnpA; transposase, IS204/IS1001/IS1096/IS1165 family protein 220065 5079074 Sputcn32_0197 Shewanella putrefaciens CN-32 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001181732.1 218776 D 319224 CDS YP_001181733.1 146291309 5079075 complement(220338..221450) 1 NC_009438.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sec:SC2060 propanediol utilization: propanol dehydrogenase; iron-containing alcohol dehydrogenase 221450 5079075 Sputcn32_0198 Shewanella putrefaciens CN-32 iron-containing alcohol dehydrogenase YP_001181733.1 220338 R 319224 CDS YP_001181734.1 146291310 5079076 complement(221466..222860) 1 NC_009438.1 PFAM: aldehyde dehydrogenase; KEGG: stm:STM2051 CoA-dependent propionaldehyde dehydrogenase; aldehyde dehydrogenase 222860 5079076 Sputcn32_0199 Shewanella putrefaciens CN-32 aldehyde dehydrogenase YP_001181734.1 221466 R 319224 CDS YP_001181735.1 146291311 5079077 complement(222857..223366) 1 NC_009438.1 KEGG: ccr:CC2181 GlcG protein, putative; hypothetical protein 223366 5079077 Sputcn32_0200 Shewanella putrefaciens CN-32 hypothetical protein YP_001181735.1 222857 R 319224 CDS YP_001181736.1 146291312 5079078 complement(223399..223677) 1 NC_009438.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: ssn:SSO_2069 putative propanediol utilization protein: polyhedral bodies; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 223677 5079078 Sputcn32_0201 Shewanella putrefaciens CN-32 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_001181736.1 223399 R 319224 CDS YP_001181737.1 146291313 5079079 complement(223682..224161) 1 NC_009438.1 KEGG: sec:SC2056 propanediol utilization; propanediol utilization 224161 5079079 Sputcn32_0202 Shewanella putrefaciens CN-32 propanediol utilization YP_001181737.1 223682 R 319224 CDS YP_001181738.1 146291314 5079080 complement(224175..224810) 1 NC_009438.1 PFAM: Propanediol utilization protein; KEGG: sec:SC2055 propanediol utilization; propanediol utilization protein 224810 5079080 Sputcn32_0203 Shewanella putrefaciens CN-32 propanediol utilization protein YP_001181738.1 224175 R 319224 CDS YP_001181739.1 146291315 5079081 complement(224815..225681) 1 NC_009438.1 PFAM: microcompartments protein; KEGG: stt:t0828 putative propanediol utilization protein PduK; microcompartments protein 225681 5079081 Sputcn32_0204 Shewanella putrefaciens CN-32 microcompartments protein YP_001181739.1 224815 R 319224 CDS YP_001181740.1 146291316 5079082 complement(225709..225999) 1 NC_009438.1 PFAM: microcompartments protein; KEGG: ssn:SSO_2065 putative propanediol utilization protein: polyhedral bodies; microcompartments protein 225999 5079082 Sputcn32_0205 Shewanella putrefaciens CN-32 microcompartments protein YP_001181740.1 225709 R 319224 CDS YP_001181741.1 146291317 5079083 complement(226071..226898) 1 NC_009438.1 TIGRFAM: MIP family channel proteins; PFAM: major intrinsic protein; KEGG: stm:STM2037 Propanediol utilization: propanediol diffusion facilitator; MIP family channel protein 226898 5079083 Sputcn32_0206 Shewanella putrefaciens CN-32 MIP family channel protein YP_001181741.1 226071 R 319224 CDS YP_001181742.1 146291318 5079084 complement(226933..227853) 1 NC_009438.1 TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Radical SAM domain protein; KEGG: ecc:c4538 putative pyruvate formate-lyase 3 activating enzyme; glycyl-radical activating family protein 227853 5079084 Sputcn32_0207 Shewanella putrefaciens CN-32 glycyl-radical activating family protein YP_001181742.1 226933 R 319224 CDS YP_001181743.1 146291319 5079085 complement(227992..230535) 1 NC_009438.1 KEGG: ctc:CTC00936 formate acetyltransferase 2; TIGRFAM: pyruvate formate-lyase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; pyruvate formate-lyase 230535 5079085 Sputcn32_0208 Shewanella putrefaciens CN-32 pyruvate formate-lyase YP_001181743.1 227992 R 319224 CDS YP_001181744.1 146291320 5079086 complement(230560..231375) 1 NC_009438.1 PFAM: microcompartments protein; KEGG: sec:SC2047 propanediol utilization: polyhedral bodies; microcompartments protein 231375 5079086 Sputcn32_0209 Shewanella putrefaciens CN-32 microcompartments protein YP_001181744.1 230560 R 319224 CDS YP_001181745.1 146291321 5079087 complement(231372..231674) 1 NC_009438.1 PFAM: microcompartments protein; KEGG: ssn:SSO_2058 putative propanediol utilization protein: polyhedral bodies; microcompartments protein 231674 5079087 Sputcn32_0210 Shewanella putrefaciens CN-32 microcompartments protein YP_001181745.1 231372 R 319224 CDS YP_001181746.1 146291322 5079137 complement(232687..233547) 1 NC_009438.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: bsu:BG10319 PTS fructose-specific enzyme IID component; PTS system mannose/fructose/sorbose family transporter subunit IID 233547 5079137 Sputcn32_0211 Shewanella putrefaciens CN-32 PTS system mannose/fructose/sorbose family transporter subunit IID YP_001181746.1 232687 R 319224 CDS YP_001181747.1 146291323 5079138 complement(233558..234355) 1 NC_009438.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS, sorbose-specific IIC subunit; KEGG: bld:BLi02829 PTS fructose-specific enzyme IIC component; RBL00186; PTS system mannose/fructose/sorbose family transporter subunit IIC 234355 5079138 Sputcn32_0212 Shewanella putrefaciens CN-32 PTS system mannose/fructose/sorbose family transporter subunit IIC YP_001181747.1 233558 R 319224 CDS YP_001181748.1 146291324 5079139 complement(234371..234685) 1 NC_009438.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: bsu:BG10317 PTS fructose-specific enzyme IIB component; PTS system sorbose subfamily transporter subunit IIB 234685 5079139 Sputcn32_0213 Shewanella putrefaciens CN-32 PTS system sorbose subfamily transporter subunit IIB YP_001181748.1 234371 R 319224 CDS YP_001181749.1 146291325 5079140 complement(234751..235674) 1 NC_009438.1 PFAM: transposase, IS4 family protein; KEGG: sgl:SG1040 transposase; transposase, IS4 family protein 235674 5079140 Sputcn32_0214 Shewanella putrefaciens CN-32 transposase, IS4 family protein YP_001181749.1 234751 R 319224 CDS YP_001181750.1 146291326 5079141 complement(235737..236078) 1 NC_009438.1 PFAM: IS1 transposase; KEGG: sec:SC1834 IS1 transposase; IS1 transposase 236078 5079141 Sputcn32_0215 Shewanella putrefaciens CN-32 IS1 transposase YP_001181750.1 235737 R 319224 CDS YP_001181751.1 146291327 5079142 complement(235997..236272) 1 NC_009438.1 PFAM: Insertion element protein; KEGG: sec:SC062 transposition protein; insertion element protein 236272 5079142 Sputcn32_0216 Shewanella putrefaciens CN-32 insertion element protein YP_001181751.1 235997 R 319224 CDS YP_001181752.1 146291328 5079143 236424..237026 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: ecc:c0291 hypothetical protein; phage integrase family protein 237026 5079143 Sputcn32_0217 Shewanella putrefaciens CN-32 phage integrase family protein YP_001181752.1 236424 D 319224 CDS YP_001181753.1 146291329 5079144 237269..238300 1 NC_009438.1 KEGG: sbo:SBO_P069 IS630 ORF; IS630 orf 238300 5079144 Sputcn32_0218 Shewanella putrefaciens CN-32 IS630 orf YP_001181753.1 237269 D 319224 CDS YP_001181754.1 146291330 5079145 complement(238827..239708) 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: stm:STM2036 Propanediol utilization: transcriptional regulation, AraC family; helix-turn-helix domain-containing protein 239708 5079145 Sputcn32_0219 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001181754.1 238827 R 319224 CDS YP_001181755.1 146291331 5079146 complement(239957..240364) 1 NC_009438.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: abo:ABO_1367 transcriptional regulator, MerR family; MerR family transcriptional regulator 240364 5079146 Sputcn32_0220 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001181755.1 239957 R 319224 CDS YP_001181756.1 146291332 5079147 240460..241356 1 NC_009438.1 KEGG: abo:ABO_1368 cation efflux system permease, putative; cation efflux system permease 241356 5079147 Sputcn32_0221 Shewanella putrefaciens CN-32 cation efflux system permease YP_001181756.1 240460 D 319224 CDS YP_001181757.1 146291333 5079148 241360..241872 1 NC_009438.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 241872 5079148 Sputcn32_0222 Shewanella putrefaciens CN-32 lipoprotein signal peptidase YP_001181757.1 241360 D 319224 CDS YP_001181758.1 146291334 5079149 241894..243183 1 NC_009438.1 PFAM: transposase, IS204/IS1001/IS1096/IS1165 family protein; KEGG: bxe:Bxe_C0885 transposase, TnpA; transposase, IS204/IS1001/IS1096/IS1165 family protein 243183 5079149 Sputcn32_0223 Shewanella putrefaciens CN-32 transposase, IS204/IS1001/IS1096/IS1165 family protein YP_001181758.1 241894 D 319224 CDS YP_001181759.1 146291335 5079150 243253..243663 1 NC_009438.1 KEGG: sdn:Sden_0608 hypothetical protein; hypothetical protein 243663 5079150 Sputcn32_0224 Shewanella putrefaciens CN-32 hypothetical protein YP_001181759.1 243253 D 319224 CDS YP_001181760.1 146291336 5079151 complement(243729..246851) 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sde:Sde_1955 cation efflux system protein; CzcA family heavy metal efflux protein 246851 5079151 Sputcn32_0225 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001181760.1 243729 R 319224 CDS YP_001181761.1 146291337 5079152 complement(246861..247907) 1 NC_009438.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sde:Sde_1956 hypothetical protein; biotin/lipoyl attachment domain-containing protein 247907 5079152 Sputcn32_0226 Shewanella putrefaciens CN-32 biotin/lipoyl attachment domain-containing protein YP_001181761.1 246861 R 319224 CDS YP_001181762.1 146291338 5079153 complement(247986..249230) 1 NC_009438.1 PFAM: outer membrane efflux protein; KEGG: sde:Sde_1958 aconitate hydratase 1; outer membrane efflux protein 249230 5079153 Sputcn32_0227 Shewanella putrefaciens CN-32 outer membrane efflux protein YP_001181762.1 247986 R 319224 CDS YP_001181763.1 146291339 5079154 complement(249282..249647) 1 NC_009438.1 hypothetical protein 249647 5079154 Sputcn32_0228 Shewanella putrefaciens CN-32 hypothetical protein YP_001181763.1 249282 R 319224 CDS YP_001181764.1 146291340 5079155 complement(249734..250639) 1 NC_009438.1 KEGG: abo:ABO_1368 cation efflux system permease, putative; cation efflux system permease 250639 5079155 Sputcn32_0229 Shewanella putrefaciens CN-32 cation efflux system permease YP_001181764.1 249734 R 319224 CDS YP_001181765.1 146291341 5079156 250662..251126 1 NC_009438.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: sde:Sde_1961 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 251126 5079156 Sputcn32_0230 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001181765.1 250662 D 319224 CDS YP_001181766.1 146291342 5079157 251158..252066 1 NC_009438.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: tcx:Tcr_1429 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 252066 5079157 Sputcn32_0231 Shewanella putrefaciens CN-32 cation diffusion facilitator family transporter YP_001181766.1 251158 D 319224 CDS YP_001181767.1 146291343 5079158 252041..252394 1 NC_009438.1 PFAM: protein of unknown function UPF0060; KEGG: abo:ABO_1373 hypothetical protein; hypothetical protein 252394 5079158 Sputcn32_0232 Shewanella putrefaciens CN-32 hypothetical protein YP_001181767.1 252041 D 319224 CDS YP_001181768.1 146291344 5079159 252538..252927 1 NC_009438.1 hypothetical protein 252927 5079159 Sputcn32_0233 Shewanella putrefaciens CN-32 hypothetical protein YP_001181768.1 252538 D 319224 CDS YP_001181769.1 146291345 5079160 252957..253367 1 NC_009438.1 hypothetical protein 253367 5079160 Sputcn32_0234 Shewanella putrefaciens CN-32 hypothetical protein YP_001181769.1 252957 D 319224 CDS YP_001181770.1 146291346 5079161 complement(253541..254446) 1 NC_009438.1 KEGG: ppr:PBPRA1708 hypothetical protein; hypothetical protein 254446 5079161 Sputcn32_0235 Shewanella putrefaciens CN-32 hypothetical protein YP_001181770.1 253541 R 319224 CDS YP_001181771.1 146291347 5079162 complement(254455..254817) 1 NC_009438.1 hypothetical protein 254817 5079162 Sputcn32_0236 Shewanella putrefaciens CN-32 hypothetical protein YP_001181771.1 254455 R 319224 CDS YP_001181772.1 146291348 5079163 complement(254905..255900) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: ppr:PBPRB0929 hypothetical protein; phage integrase family protein 255900 5079163 Sputcn32_0237 Shewanella putrefaciens CN-32 phage integrase family protein YP_001181772.1 254905 R 319224 CDS YP_001181773.1 146291349 5079164 complement(255998..256582) 1 NC_009438.1 KEGG: shm:Shewmr7_2032 hypothetical protein; hypothetical protein 256582 5079164 Sputcn32_0238 Shewanella putrefaciens CN-32 hypothetical protein YP_001181773.1 255998 R 319224 CDS YP_001181774.1 146291350 5079165 complement(256659..257336) 1 NC_009438.1 hypothetical protein 257336 5079165 Sputcn32_0239 Shewanella putrefaciens CN-32 hypothetical protein YP_001181774.1 256659 R 319224 CDS YP_001181775.1 146291351 5079166 complement(257841..258257) 1 NC_009438.1 hypothetical protein 258257 5079166 Sputcn32_0240 Shewanella putrefaciens CN-32 hypothetical protein YP_001181775.1 257841 R 319224 CDS YP_001181776.1 146291352 5079167 complement(258257..258649) 1 NC_009438.1 hypothetical protein 258649 5079167 Sputcn32_0241 Shewanella putrefaciens CN-32 hypothetical protein YP_001181776.1 258257 R 319224 CDS YP_001181777.1 146291353 5079168 complement(258732..260468) 1 NC_009438.1 hypothetical protein 260468 5079168 Sputcn32_0242 Shewanella putrefaciens CN-32 hypothetical protein YP_001181777.1 258732 R 319224 CDS YP_001181778.1 146291354 5079169 complement(261081..261644) 1 NC_009438.1 KEGG: son:SO2875 ISSod10, transposase OrfB; ISSod10, transposase OrfB 261644 5079169 Sputcn32_0243 Shewanella putrefaciens CN-32 ISSod10, transposase OrfB YP_001181778.1 261081 R 319224 CDS YP_001181779.1 146291355 5079170 complement(261628..262107) 1 NC_009438.1 KEGG: son:SO4533 ISSod10, transposase OrfA; ISSod10, transposase OrfA 262107 5079170 Sputcn32_0244 Shewanella putrefaciens CN-32 ISSod10, transposase OrfA YP_001181779.1 261628 R 319224 CDS YP_001181780.1 146291356 5079172 complement(262745..263848) 1 NC_009438.1 PFAM: transposase, IS4 family protein; KEGG: plu:plu3796 hypothetical protein; transposase, IS4 family protein 263848 5079172 Sputcn32_0246 Shewanella putrefaciens CN-32 transposase, IS4 family protein YP_001181780.1 262745 R 319224 CDS YP_001181781.1 146291357 5079173 264071..264493 1 NC_009438.1 KEGG: sfr:Sfri_1967 hypothetical protein; hypothetical protein 264493 5079173 Sputcn32_0247 Shewanella putrefaciens CN-32 hypothetical protein YP_001181781.1 264071 D 319224 CDS YP_001181782.1 146291358 5079174 264630..265145 1 NC_009438.1 PFAM: protein of unknown function DUF411; KEGG: sfr:Sfri_1968 protein of unknown function DUF411; hypothetical protein 265145 5079174 Sputcn32_0248 Shewanella putrefaciens CN-32 hypothetical protein YP_001181782.1 264630 D 319224 CDS YP_001181783.1 146291359 5079175 265142..267160 1 NC_009438.1 TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase, type 1; multicopper oxidase, type 2; multicopper oxidase, type 3; KEGG: sfr:Sfri_1969 copper-resistance protein, CopA family protein; CopA family copper resistance protein 267160 5079175 Sputcn32_0249 Shewanella putrefaciens CN-32 CopA family copper resistance protein YP_001181783.1 265142 D 319224 CDS YP_001181784.1 146291360 5079176 267172..267885 1 NC_009438.1 PFAM: copper resistance B precursor; KEGG: sfr:Sfri_1970 copper resistance B precursor; copper resistance B 267885 5079176 Sputcn32_0250 Shewanella putrefaciens CN-32 copper resistance B YP_001181784.1 267172 D 319224 CDS YP_001181785.1 146291361 5081078 268001..268423 1 NC_009438.1 PFAM: copper resistance protein CopC; KEGG: sfr:Sfri_1971 copper resistance protein CopC; copper resistance protein CopC 268423 5081078 Sputcn32_0251 Shewanella putrefaciens CN-32 copper resistance protein CopC YP_001181785.1 268001 D 319224 CDS YP_001181786.1 146291362 5081079 268438..269334 1 NC_009438.1 PFAM: copper resistance D domain protein; KEGG: sfr:Sfri_1972 copper resistance D domain protein; copper resistance D domain-containing protein 269334 5081079 Sputcn32_0252 Shewanella putrefaciens CN-32 copper resistance D domain-containing protein YP_001181786.1 268438 D 319224 CDS YP_001181787.1 146291363 5081080 269410..269853 1 NC_009438.1 KEGG: sfr:Sfri_1973 putative orphan protein; hypothetical protein 269853 5081080 Sputcn32_0253 Shewanella putrefaciens CN-32 hypothetical protein YP_001181787.1 269410 D 319224 CDS YP_001181788.1 146291364 5081081 complement(270036..270587) 1 NC_009438.1 KEGG: oih:OB3301 hypothetical protein; hypothetical protein 270587 5081081 Sputcn32_0254 Shewanella putrefaciens CN-32 hypothetical protein YP_001181788.1 270036 R 319224 CDS YP_001181789.1 146291365 5081082 271015..272235 1 NC_009438.1 PFAM: outer membrane porin; KEGG: wsu:WS0983 hypothetical protein; outer membrane porin 272235 5081082 Sputcn32_0255 Shewanella putrefaciens CN-32 outer membrane porin YP_001181789.1 271015 D 319224 CDS YP_001181790.1 146291366 5081083 272702..272983 1 NC_009438.1 KEGG: son:SO2129 transposase, putative; hypothetical protein 272983 5081083 Sputcn32_0256 Shewanella putrefaciens CN-32 hypothetical protein YP_001181790.1 272702 D 319224 CDS YP_001181791.1 146291367 5081084 complement(273165..274640) 1 NC_009438.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: ecs:ECs0608 putative 2-component sensor protein; sensor kinase CusS 274640 5081084 Sputcn32_0257 Shewanella putrefaciens CN-32 sensor kinase CusS YP_001181791.1 273165 R 319224 CDS YP_001181792.1 146291368 5081085 complement(274633..275313) 1 NC_009438.1 response regulator in two-component regulatory system with CusS; regulates the copper efflux system; DNA-binding transcriptional activator CusR 275313 5081085 Sputcn32_0258 Shewanella putrefaciens CN-32 DNA-binding transcriptional activator CusR YP_001181792.1 274633 R 319224 CDS YP_001181793.1 146291369 5081086 275503..276888 1 NC_009438.1 with CusA, CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver; copper/silver efflux system outer membrane protein CusC 276888 5081086 Sputcn32_0259 Shewanella putrefaciens CN-32 copper/silver efflux system outer membrane protein CusC YP_001181793.1 275503 D 319224 CDS YP_001181794.1 146291370 5081087 276917..277270 1 NC_009438.1 KEGG: ecj:JW0562 periplasmic copper-binding protein; copper-binding protein 277270 5081087 Sputcn32_0260 Shewanella putrefaciens CN-32 copper-binding protein YP_001181794.1 276917 D 319224 CDS YP_001181795.1 146291371 5081088 277384..278676 1 NC_009438.1 with CusA, CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver; copper/silver efflux system membrane fusion protein CusB 278676 5081088 Sputcn32_0261 Shewanella putrefaciens CN-32 copper/silver efflux system membrane fusion protein CusB YP_001181795.1 277384 D 319224 CDS YP_001181796.1 146291372 5081089 278687..281833 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: ecp:ECP_0606 putative cation efflux system protein CusA; CzcA family heavy metal efflux protein 281833 5081089 Sputcn32_0262 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001181796.1 278687 D 319224 CDS YP_001181797.1 146291373 5081090 281929..282360 1 NC_009438.1 PFAM: protein of unknown function DUF411; KEGG: mca:MCA0560 hypothetical protein; hypothetical protein 282360 5081090 Sputcn32_0263 Shewanella putrefaciens CN-32 hypothetical protein YP_001181797.1 281929 D 319224 CDS YP_001181798.1 146291374 5081091 282487..284934 1 NC_009438.1 KEGG: sal:Sala_2544 heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 284934 5081091 Sputcn32_0264 Shewanella putrefaciens CN-32 heavy metal translocating P-type ATPase YP_001181798.1 282487 D 319224 CDS YP_001181799.1 146291375 5081092 284975..285172 1 NC_009438.1 KEGG: cvi:CV3215 hypothetical protein; hypothetical protein 285172 5081092 Sputcn32_0265 Shewanella putrefaciens CN-32 hypothetical protein YP_001181799.1 284975 D 319224 CDS YP_001181800.1 146291376 5081093 complement(285206..285943) 1 NC_009438.1 PFAM: peptidase M23B; KEGG: stm:STM1890 putative peptidase; peptidase M23B 285943 5081093 Sputcn32_0266 Shewanella putrefaciens CN-32 peptidase M23B YP_001181800.1 285206 R 319224 CDS YP_001181801.1 146291377 5081094 complement(286232..286681) 1 NC_009438.1 KEGG: spt:SPA2166 possible copper-binding protein; hypothetical protein 286681 5081094 Sputcn32_0267 Shewanella putrefaciens CN-32 hypothetical protein YP_001181801.1 286232 R 319224 CDS YP_001181802.1 146291378 5081096 complement(287569..287919) 1 NC_009438.1 KEGG: sfr:Sfri_0213 likely secreted protein containing plastocyanin domain; plastocyanin domain-containing protein 287919 5081096 Sputcn32_0269 Shewanella putrefaciens CN-32 plastocyanin domain-containing protein YP_001181802.1 287569 R 319224 CDS YP_001181803.1 146291379 5081097 complement(287930..290176) 1 NC_009438.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: sfr:Sfri_0212 copper-translocating P-type ATPase; copper-translocating P-type ATPase 290176 5081097 Sputcn32_0270 Shewanella putrefaciens CN-32 copper-translocating P-type ATPase YP_001181803.1 287930 R 319224 CDS YP_001181804.1 146291380 5081098 complement(290176..290646) 1 NC_009438.1 PFAM: regulatory protein, MerR; KEGG: sfr:Sfri_0211 transcriptional regulator, MerR family protein; MerR family transcriptional regulator 290646 5081098 Sputcn32_0271 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001181804.1 290176 R 319224 CDS YP_001181805.1 146291381 5081099 complement(290767..291201) 1 NC_009438.1 KEGG: sfr:Sfri_1966 hypothetical protein; hypothetical protein 291201 5081099 Sputcn32_0272 Shewanella putrefaciens CN-32 hypothetical protein YP_001181805.1 290767 R 319224 CDS YP_001181806.1 146291382 5081100 complement(291293..291637) 1 NC_009438.1 KEGG: sfr:Sfri_1965 hypothetical protein; hypothetical protein 291637 5081100 Sputcn32_0273 Shewanella putrefaciens CN-32 hypothetical protein YP_001181806.1 291293 R 319224 CDS YP_001181807.1 146291383 5081102 complement(292164..293228) 1 NC_009438.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: sme:SMb21045 putative reverse transcriptasematurase protein; RNA-directed DNA polymerase 293228 5081102 Sputcn32_0275 Shewanella putrefaciens CN-32 RNA-directed DNA polymerase YP_001181807.1 292164 R 319224 CDS YP_001181808.1 146291384 5081103 complement(293225..294058) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vch:VCA0791 transposase OrfAB, subunit B; integrase catalytic subunit 294058 5081103 Sputcn32_0276 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001181808.1 293225 R 319224 CDS YP_001181809.1 146291385 5081104 complement(294097..294408) 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vch:VCA0792 transposase OrfAB, subunit A; transposase IS3/IS911 family protein 294408 5081104 Sputcn32_0277 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001181809.1 294097 R 319224 CDS YP_001181810.1 146291386 5081105 complement(294467..295090) 1 NC_009438.1 KEGG: ade:Adeh_2330 hypothetical protein; hypothetical protein 295090 5081105 Sputcn32_0278 Shewanella putrefaciens CN-32 hypothetical protein YP_001181810.1 294467 R 319224 CDS YP_001181811.1 146291387 5081106 complement(295147..295320) 1 NC_009438.1 KEGG: vfi:VFA1085 hypothetical protein; hypothetical protein 295320 5081106 Sputcn32_0279 Shewanella putrefaciens CN-32 hypothetical protein YP_001181811.1 295147 R 319224 CDS YP_001181812.1 146291388 5081107 complement(295331..295531) 1 NC_009438.1 KEGG: cps:CPS_2062 site-specific recombinase, phage integrase family; phage integrase family site specific recombinase 295531 5081107 Sputcn32_0280 Shewanella putrefaciens CN-32 phage integrase family site specific recombinase YP_001181812.1 295331 R 319224 CDS YP_001181813.1 146291389 5081108 295616..296953 1 NC_009438.1 KEGG: gme:Gmet_1465 hypothetical protein; hypothetical protein 296953 5081108 Sputcn32_0281 Shewanella putrefaciens CN-32 hypothetical protein YP_001181813.1 295616 D 319224 CDS YP_001181814.1 146291390 5081109 complement(297048..300197) 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: son:SOA0153 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 300197 5081109 Sputcn32_0282 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001181814.1 297048 R 319224 CDS YP_001181815.1 146291391 5081110 complement(300207..301745) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: son:SOA0154 heavy metal efflux protein, putative; RND family efflux transporter MFP subunit 301745 5081110 Sputcn32_0283 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001181815.1 300207 R 319224 CDS YP_001181816.1 146291392 5081111 complement(301767..302027) 1 NC_009438.1 KEGG: son:SOA0155 hypothetical protein; hypothetical protein 302027 5081111 Sputcn32_0284 Shewanella putrefaciens CN-32 hypothetical protein YP_001181816.1 301767 R 319224 CDS YP_001181817.1 146291393 5081112 complement(302279..302719) 1 NC_009438.1 KEGG: son:SOA0156 hypothetical protein; hypothetical protein 302719 5081112 Sputcn32_0285 Shewanella putrefaciens CN-32 hypothetical protein YP_001181817.1 302279 R 319224 CDS YP_001181818.1 146291394 5081113 303207..303770 1 NC_009438.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: son:SO4591 tetraheme cytochrome c; NapC/NirT cytochrome c domain-containing protein 303770 5081113 Sputcn32_0286 Shewanella putrefaciens CN-32 NapC/NirT cytochrome c domain-containing protein YP_001181818.1 303207 D 319224 CDS YP_001181819.1 146291395 5081114 complement(303844..304119) 1 NC_009438.1 PFAM: protein of unknown function DUF1145; KEGG: son:SO4588 hypothetical protein; hypothetical protein 304119 5081114 Sputcn32_0287 Shewanella putrefaciens CN-32 hypothetical protein YP_001181819.1 303844 R 319224 CDS YP_001181820.1 146291396 5081115 complement(304103..304768) 1 NC_009438.1 TIGRFAM: putative methyltransferase; PFAM: conserved hypothetical protein 95; KEGG: she:Shewmr4_3775 putative methyltransferase; putative methyltransferase 304768 5081115 Sputcn32_0288 Shewanella putrefaciens CN-32 putative methyltransferase YP_001181820.1 304103 R 319224 CDS YP_001181821.1 146291397 5081116 304982..306430 1 NC_009438.1 KEGG: son:SO4586 cell division protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54, G- domain; GTP-binding signal recognition particle SRP54, helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 306430 5081116 Sputcn32_0289 Shewanella putrefaciens CN-32 signal recognition particle-docking protein FtsY YP_001181821.1 304982 D 319224 CDS YP_001181822.1 146291398 5081117 306434..307150 1 NC_009438.1 KEGG: shm:Shewmr7_3846 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 307150 5081117 Sputcn32_0290 Shewanella putrefaciens CN-32 cell division ATP-binding protein FtsE YP_001181822.1 306434 D 319224 CDS YP_001181823.1 146291399 5081118 307147..308112 1 NC_009438.1 PFAM: protein of unknown function DUF214; KEGG: she:Shewmr4_3772 protein of unknown function DUF214; hypothetical protein 308112 5081118 Sputcn32_0291 Shewanella putrefaciens CN-32 hypothetical protein YP_001181823.1 307147 D 319224 CDS YP_001181824.1 146291400 5081119 308360..309217 1 NC_009438.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 309217 5081119 Sputcn32_0292 Shewanella putrefaciens CN-32 RNA polymerase factor sigma-32 YP_001181824.1 308360 D 319224 CDS YP_001181825.1 146291401 5081120 310518..311060 1 NC_009438.1 PFAM: Fimbrial protein; KEGG: bam:Bamb_2833 fimbrial protein; fimbrial protein 311060 5081120 Sputcn32_0293 Shewanella putrefaciens CN-32 fimbrial protein YP_001181825.1 310518 D 319224 CDS YP_001181826.1 146291402 5081122 311981..313354 1 NC_009438.1 KEGG: yps:YPTB0157 hypothetical protein; hypothetical protein 313354 5081122 Sputcn32_0295 Shewanella putrefaciens CN-32 hypothetical protein YP_001181826.1 311981 D 319224 CDS YP_001181827.1 146291403 5081123 313743..314063 1 NC_009438.1 hypothetical protein 314063 5081123 Sputcn32_0296 Shewanella putrefaciens CN-32 hypothetical protein YP_001181827.1 313743 D 319224 CDS YP_001181828.1 146291404 5081124 314187..315530 1 NC_009438.1 KEGG: pau:PA14_59750 fimbrial subunit; fimbrial subunit 315530 5081124 Sputcn32_0297 Shewanella putrefaciens CN-32 fimbrial subunit YP_001181828.1 314187 D 319224 CDS YP_001181829.1 146291405 5081125 315969..316511 1 NC_009438.1 PFAM: Fimbrial protein; KEGG: bam:Bamb_2833 fimbrial protein; fimbrial protein 316511 5081125 Sputcn32_0298 Shewanella putrefaciens CN-32 fimbrial protein YP_001181829.1 315969 D 319224 CDS YP_001181830.1 146291406 5081126 316590..317318 1 NC_009438.1 PFAM: pili assembly chaperone; KEGG: ypn:YPN_0086 fimbrial chaperone; pili assembly chaperone 317318 5081126 Sputcn32_0299 Shewanella putrefaciens CN-32 pili assembly chaperone YP_001181830.1 316590 D 319224 CDS YP_001181831.1 146291407 5081127 317329..319881 1 NC_009438.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pae:PA2130 probable fimbrial biogenesis usher protein; fimbrial biogenesis outer membrane usher protein 319881 5081127 Sputcn32_0300 Shewanella putrefaciens CN-32 fimbrial biogenesis outer membrane usher protein YP_001181831.1 317329 D 319224 CDS YP_001181832.1 146291408 5081180 319895..321265 1 NC_009438.1 KEGG: pau:PA14_59750 fimbrial subunit; fimbrial subunit 321265 5081180 Sputcn32_0301 Shewanella putrefaciens CN-32 fimbrial subunit YP_001181832.1 319895 D 319224 CDS YP_001181833.1 146291409 5081181 321427..322161 1 NC_009438.1 PFAM: pili assembly chaperone; KEGG: rme:Rmet_1663 pili assembly chaperone; pili assembly chaperone 322161 5081181 Sputcn32_0302 Shewanella putrefaciens CN-32 pili assembly chaperone YP_001181833.1 321427 D 319224 CDS YP_001181834.1 146291410 5081182 complement(322756..326346) 1 NC_009438.1 KEGG: psb:Psyr_2113 PAS; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; extracellular solute-binding protein, family 3; multi-sensor hybrid histidine kinase 326346 5081182 Sputcn32_0303 Shewanella putrefaciens CN-32 multi-sensor hybrid histidine kinase YP_001181834.1 322756 R 319224 CDS YP_001181835.1 146291411 5081183 complement(326343..326966) 1 NC_009438.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: pfo:Pfl_4515 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 326966 5081183 Sputcn32_0304 Shewanella putrefaciens CN-32 two component LuxR family transcriptional regulator YP_001181835.1 326343 R 319224 CDS YP_001181836.1 146291412 5081184 327334..328572 1 NC_009438.1 PFAM: EAL domain protein; response regulator receiver; KEGG: pau:PA14_12810 probable two-component response regulator; response regulator receiver modulated diguanylate phosphodiesterase 328572 5081184 Sputcn32_0305 Shewanella putrefaciens CN-32 response regulator receiver modulated diguanylate phosphodiesterase YP_001181836.1 327334 D 319224 CDS YP_001181837.1 146291413 5081185 328682..329380 1 NC_009438.1 KEGG: she:Shewmr4_2113 hypothetical protein; hypothetical protein 329380 5081185 Sputcn32_0306 Shewanella putrefaciens CN-32 hypothetical protein YP_001181837.1 328682 D 319224 CDS YP_001181838.1 146291414 5081186 complement(329452..330870) 1 NC_009438.1 TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO4576 O-succinylbenzoic acid--CoA ligase; o-succinylbenzoate--CoA ligase 330870 5081186 Sputcn32_0307 Shewanella putrefaciens CN-32 o-succinylbenzoate--CoA ligase YP_001181838.1 329452 R 319224 CDS YP_001181839.1 146291415 5081187 complement(330872..331966) 1 NC_009438.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 331966 5081187 Sputcn32_0308 Shewanella putrefaciens CN-32 O-succinylbenzoate synthase YP_001181839.1 330872 R 319224 CDS YP_001181840.1 146291416 5081188 complement(331994..332782) 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; KEGG: she:Shewmr4_3768 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 332782 5081188 Sputcn32_0309 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001181840.1 331994 R 319224 CDS YP_001181841.1 146291417 5081189 complement(332782..334503) 1 NC_009438.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 334503 5081189 Sputcn32_0310 Shewanella putrefaciens CN-32 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_001181841.1 332782 R 319224 CDS YP_001181842.1 146291418 5081190 complement(334686..335654) 1 NC_009438.1 PFAM: regulatory protein, LysR; KEGG: shm:Shewmr7_3839 transcriptional regulator, LysR family; LysR family transcriptional regulator 335654 5081190 Sputcn32_0311 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001181842.1 334686 R 319224 CDS YP_001181843.1 146291419 5081191 336066..336542 1 NC_009438.1 KEGG: she:Shewmr4_3765 hypothetical protein; hypothetical protein 336542 5081191 Sputcn32_0312 Shewanella putrefaciens CN-32 hypothetical protein YP_001181843.1 336066 D 319224 CDS YP_001181844.1 146291420 5081192 336620..337084 1 NC_009438.1 KEGG: she:Shewmr4_3764 formate-dependent nitrite reductase; formate-dependent nitrite reductase 337084 5081192 Sputcn32_0313 Shewanella putrefaciens CN-32 formate-dependent nitrite reductase YP_001181844.1 336620 D 319224 CDS YP_001181845.1 146291421 5081193 337089..337775 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: she:Shewmr4_3763 twin-arginine translocation pathway signal; 4Fe-4S ferredoxin 337775 5081193 Sputcn32_0314 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001181845.1 337089 D 319224 CDS YP_001181846.1 146291422 5081194 337772..338713 1 NC_009438.1 PFAM: Polysulphide reductase, NrfD; KEGG: son:SO4568 formate-dependent nitrite reductase, nrfD protein; polysulfide reductase, NrfD 338713 5081194 Sputcn32_0315 Shewanella putrefaciens CN-32 polysulfide reductase, NrfD YP_001181846.1 337772 D 319224 CDS YP_001181847.1 146291423 5081195 complement(338992..339423) 1 NC_009438.1 PFAM: regulatory protein, AsnC/Lrp family; KEGG: son:SO4567 transcriptional regulator, AsnC family; AsnC family transcriptional regulator 339423 5081195 Sputcn32_0316 Shewanella putrefaciens CN-32 AsnC family transcriptional regulator YP_001181847.1 338992 R 319224 CDS YP_001181848.1 146291424 5081196 339673..340935 1 NC_009438.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; inner membrane protein YjeH 340935 5081196 Sputcn32_0317 Shewanella putrefaciens CN-32 inner membrane protein YjeH YP_001181848.1 339673 D 319224 CDS YP_001181849.1 146291425 5081197 complement(340918..341376) 1 NC_009438.1 PFAM: protein of unknown function DUF1332; KEGG: shm:Shewmr7_3830 protein of unknown function DUF1332; hypothetical protein 341376 5081197 Sputcn32_0318 Shewanella putrefaciens CN-32 hypothetical protein YP_001181849.1 340918 R 319224 CDS YP_001181850.1 146291426 5081198 complement(341474..342004) 1 NC_009438.1 KEGG: she:Shewmr4_3756 hypothetical protein; hypothetical protein 342004 5081198 Sputcn32_0319 Shewanella putrefaciens CN-32 hypothetical protein YP_001181850.1 341474 R 319224 CDS YP_001181851.1 146291427 5081199 342194..342901 1 NC_009438.1 KEGG: shm:Shewmr7_3828 hypothetical protein; hypothetical protein 342901 5081199 Sputcn32_0320 Shewanella putrefaciens CN-32 hypothetical protein YP_001181851.1 342194 D 319224 CDS YP_001181852.1 146291428 5081200 342936..344390 1 NC_009438.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: she:Shewmr4_3754 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 344390 5081200 Sputcn32_0321 Shewanella putrefaciens CN-32 Sel1 domain-containing protein YP_001181852.1 342936 D 319224 CDS YP_001181853.1 146291429 5081201 complement(344400..344729) 1 NC_009438.1 KEGG: shm:Shewmr7_3826 hypothetical protein; hypothetical protein 344729 5081201 Sputcn32_0322 Shewanella putrefaciens CN-32 hypothetical protein YP_001181853.1 344400 R 319224 CDS YP_001181854.1 146291430 5081202 345092..346963 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: son:SO4557 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 346963 5081202 Sputcn32_0323 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001181854.1 345092 D 319224 CDS YP_001181855.1 146291431 5081203 complement(347066..348037) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO4556 transcriptional regulator, LysR family; LysR family transcriptional regulator 348037 5081203 Sputcn32_0324 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001181855.1 347066 R 319224 CDS YP_001181856.1 146291432 5081204 348151..349359 1 NC_009438.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4555 drug resistance transporter, Bcr/CflA family protein; Bcr/CflA subfamily drug resistance transporter 349359 5081204 Sputcn32_0325 Shewanella putrefaciens CN-32 Bcr/CflA subfamily drug resistance transporter YP_001181856.1 348151 D 319224 CDS YP_001181857.1 146291433 5081205 349483..350088 1 NC_009438.1 PFAM: DTW domain containing protein; KEGG: son:SO4554 hypothetical protein; DTW domain-containing protein 350088 5081205 Sputcn32_0326 Shewanella putrefaciens CN-32 DTW domain-containing protein YP_001181857.1 349483 D 319224 CDS YP_001181858.1 146291434 5081206 complement(350449..352569) 1 NC_009438.1 KEGG: son:SO4552 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 352569 5081206 Sputcn32_0327 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001181858.1 350449 R 319224 CDS YP_001181859.1 146291435 5081207 352876..353229 1 NC_009438.1 KEGG: she:Shewmr4_3747 hypothetical protein; hypothetical protein 353229 5081207 Sputcn32_0328 Shewanella putrefaciens CN-32 hypothetical protein YP_001181859.1 352876 D 319224 CDS YP_001181860.1 146291436 5081208 353300..353938 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_3819 methyltransferase type 11; type 11 methyltransferase 353938 5081208 Sputcn32_0329 Shewanella putrefaciens CN-32 type 11 methyltransferase YP_001181860.1 353300 D 319224 CDS YP_001181861.1 146291437 5081209 354269..356326 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_3798 TonB-dependent receptor; TonB-dependent receptor 356326 5081209 Sputcn32_0330 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001181861.1 354269 D 319224 CDS YP_001181862.1 146291438 5081210 complement(356420..357403) 1 NC_009438.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: she:Shewmr4_3726 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 357403 5081210 Sputcn32_0331 Shewanella putrefaciens CN-32 formate dehydrogenase subunit gamma YP_001181862.1 356420 R 319224 CDS YP_001181863.1 146291439 5081211 complement(357483..358052) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_3796 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 358052 5081211 Sputcn32_0332 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001181863.1 357483 R 319224 CDS YP_001181864.1 146291440 5081212 complement(358082..360934) 1 NC_009438.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: shm:Shewmr7_3795 twin-arginine translocation pathway signal; molybdopterin oxidoreductase 360934 5081212 Sputcn32_0333 Shewanella putrefaciens CN-32 molybdopterin oxidoreductase YP_001181864.1 358082 R 319224 CDS YP_001181865.1 146291441 5081213 complement(360952..361152) 1 NC_009438.1 KEGG: shm:Shewmr7_3794 twin-arginine translocation pathway signal; twin-arginine translocation pathway signal 361152 5081213 Sputcn32_0334 Shewanella putrefaciens CN-32 twin-arginine translocation pathway signal YP_001181865.1 360952 R 319224 CDS YP_001181866.1 146291442 5081214 complement(361537..362565) 1 NC_009438.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: shm:Shewmr7_3793 formate dehydrogenase, gamma subunit; formate dehydrogenase subunit gamma 362565 5081214 Sputcn32_0335 Shewanella putrefaciens CN-32 formate dehydrogenase subunit gamma YP_001181866.1 361537 R 319224 CDS YP_001181867.1 146291443 5081215 complement(362615..363211) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4510 formate dehydrogenase, iron-sulfur subunit; 4Fe-4S ferredoxin 363211 5081215 Sputcn32_0336 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001181867.1 362615 R 319224 CDS YP_001181868.1 146291444 5081216 complement(363238..366087) 1 NC_009438.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO4509 formate dehydrogenase, alpha subunit; molybdopterin oxidoreductase 366087 5081216 Sputcn32_0337 Shewanella putrefaciens CN-32 molybdopterin oxidoreductase YP_001181868.1 363238 R 319224 CDS YP_001181869.1 146291445 5081217 complement(366106..366336) 1 NC_009438.1 KEGG: son:SO4508 hypothetical protein; hypothetical protein 366336 5081217 Sputcn32_0338 Shewanella putrefaciens CN-32 hypothetical protein YP_001181869.1 366106 R 319224 CDS YP_001181870.1 146291446 5081218 complement(366463..367140) 1 NC_009438.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: shm:Shewmr7_3789 cytoplasmic chaperone TorD family protein; cytoplasmic chaperone TorD family protein 367140 5081218 Sputcn32_0339 Shewanella putrefaciens CN-32 cytoplasmic chaperone TorD family protein YP_001181870.1 366463 R 319224 CDS YP_001181871.1 146291447 5081219 complement(367151..368812) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4506 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 368812 5081219 Sputcn32_0340 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001181871.1 367151 R 319224 CDS YP_001181872.1 146291448 5081220 complement(369000..369656) 1 NC_009438.1 KEGG: shm:Shewmr7_3787 hypothetical protein; hypothetical protein 369656 5081220 Sputcn32_0341 Shewanella putrefaciens CN-32 hypothetical protein YP_001181872.1 369000 R 319224 CDS YP_001181873.1 146291449 5081221 complement(369656..370120) 1 NC_009438.1 KEGG: son:SO4504 hypothetical protein; hypothetical protein 370120 5081221 Sputcn32_0342 Shewanella putrefaciens CN-32 hypothetical protein YP_001181873.1 369656 R 319224 CDS YP_001181874.1 146291450 5081222 370426..371322 1 NC_009438.1 PFAM: formate dehydrogenase, subunit FdhD; KEGG: she:Shewmr4_3714 formate dehydrogenase, subunit FdhD; formate dehydrogenase subunit FdhD 371322 5081222 Sputcn32_0343 Shewanella putrefaciens CN-32 formate dehydrogenase subunit FdhD YP_001181874.1 370426 D 319224 CDS YP_001181875.1 146291451 5081223 371385..372290 1 NC_009438.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: she:Shewmr4_3713 DNA binding domain, excisionase family; DNA binding domain-containing protein 372290 5081223 Sputcn32_0344 Shewanella putrefaciens CN-32 DNA binding domain-containing protein YP_001181875.1 371385 D 319224 CDS YP_001181876.1 146291452 5081279 378641..379153 1 NC_009438.1 KEGG: shm:Shewmr7_3783 hypothetical protein; hypothetical protein 379153 5081279 Sputcn32_0345 Shewanella putrefaciens CN-32 hypothetical protein YP_001181876.1 378641 D 319224 CDS YP_001181877.1 146291453 5081280 379564..379773 1 NC_009438.1 KEGG: son:SO4490 hypothetical protein; hypothetical protein 379773 5081280 Sputcn32_0346 Shewanella putrefaciens CN-32 hypothetical protein YP_001181877.1 379564 D 319224 CDS YP_001181878.1 146291454 5081281 380239..381642 1 NC_009438.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: bsu:BG12951 similar to 2-oxoglutarate/malate translocator; anion transporter 381642 5081281 Sputcn32_0347 Shewanella putrefaciens CN-32 anion transporter YP_001181878.1 380239 D 319224 CDS YP_001181879.1 146291455 5081282 381710..383218 1 NC_009438.1 TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: ppr:PBPRA2409 putative fumarate hydratase, class I; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 383218 5081282 Sputcn32_0348 Shewanella putrefaciens CN-32 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001181879.1 381710 D 319224 CDS YP_001181880.1 146291456 5081283 complement(383302..383979) 1 NC_009438.1 PFAM: response regulator receiver; Helix-turn-helix, type 11 domain protein; KEGG: vpa:VP1711 response regulator; response regulator receiver 383979 5081283 Sputcn32_0349 Shewanella putrefaciens CN-32 response regulator receiver YP_001181880.1 383302 R 319224 CDS YP_001181881.1 146291457 5081284 complement(383969..385636) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: bld:BLi01245 hypothetical protein; signal transduction histidine kinase regulating citrate/malate metabolism 385636 5081284 Sputcn32_0350 Shewanella putrefaciens CN-32 signal transduction histidine kinase regulating citrate/malate metabolism YP_001181881.1 383969 R 319224 CDS YP_001181882.1 146291458 5081285 complement(385820..386185) 1 NC_009438.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 386185 5081285 Sputcn32_0351 Shewanella putrefaciens CN-32 fumarate reductase subunit D YP_001181882.1 385820 R 319224 CDS YP_001181883.1 146291459 5081286 complement(386198..386581) 1 NC_009438.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 386581 5081286 Sputcn32_0352 Shewanella putrefaciens CN-32 fumarate reductase subunit C YP_001181883.1 386198 R 319224 CDS YP_001181884.1 146291460 5081287 complement(386583..387323) 1 NC_009438.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 387323 5081287 Sputcn32_0353 Shewanella putrefaciens CN-32 fumarate reductase iron-sulfur subunit YP_001181884.1 386583 R 319224 CDS YP_001181885.1 146291461 5081288 complement(387323..389098) 1 NC_009438.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 389098 5081288 Sputcn32_0354 Shewanella putrefaciens CN-32 fumarate reductase flavoprotein subunit YP_001181885.1 387323 R 319224 CDS YP_001181886.1 146291462 5081289 complement(389401..389970) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO4489 acetyltransferase, GNAT family; N-acetyltransferase GCN5 389970 5081289 Sputcn32_0355 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001181886.1 389401 R 319224 CDS YP_001181887.1 146291463 5081290 complement(389991..391307) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: son:SO4488 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 391307 5081290 Sputcn32_0356 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001181887.1 389991 R 319224 CDS YP_001181888.1 146291464 5081291 complement(391312..391971) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4487 DNA-binding response regulator; two component transcriptional regulator 391971 5081291 Sputcn32_0357 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001181888.1 391312 R 319224 CDS YP_001181889.1 146291465 5081292 complement(391971..392237) 1 NC_009438.1 PFAM: Propeptide, PepSY amd peptidase M4; KEGG: shm:Shewmr7_3780 propeptide, PepSY amd peptidase M4; peptidase 392237 5081292 Sputcn32_0358 Shewanella putrefaciens CN-32 peptidase YP_001181889.1 391971 R 319224 CDS YP_001181890.1 146291466 5081293 complement(392230..392793) 1 NC_009438.1 KEGG: son:SO4485 diheme cytochrome c; diheme cytochrome c 392793 5081293 Sputcn32_0359 Shewanella putrefaciens CN-32 diheme cytochrome c YP_001181890.1 392230 R 319224 CDS YP_001181891.1 146291467 5081294 complement(392884..393330) 1 NC_009438.1 KEGG: shm:Shewmr7_3778 cytochrome c-type protein Shp; cytochrome c-type protein Shp 393330 5081294 Sputcn32_0360 Shewanella putrefaciens CN-32 cytochrome c-type protein Shp YP_001181891.1 392884 R 319224 CDS YP_001181892.1 146291468 5081295 complement(393384..393971) 1 NC_009438.1 PFAM: cytochrome B561; KEGG: she:Shewmr4_0244 cytochrome b561; cytochrome B561 393971 5081295 Sputcn32_0361 Shewanella putrefaciens CN-32 cytochrome B561 YP_001181892.1 393384 R 319224 CDS YP_001181893.1 146291469 5081296 394188..394652 1 NC_009438.1 KEGG: she:Shewmr4_0245 hypothetical protein; hypothetical protein 394652 5081296 Sputcn32_0362 Shewanella putrefaciens CN-32 hypothetical protein YP_001181893.1 394188 D 319224 CDS YP_001181894.1 146291470 5081297 394733..395236 1 NC_009438.1 KEGG: son:SO4481 hypothetical protein; hypothetical protein 395236 5081297 Sputcn32_0363 Shewanella putrefaciens CN-32 hypothetical protein YP_001181894.1 394733 D 319224 CDS YP_001181895.1 146291471 5081298 complement(395402..396922) 1 NC_009438.1 PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase; aldehyde dehydrogenase 396922 5081298 Sputcn32_0364 Shewanella putrefaciens CN-32 aldehyde dehydrogenase YP_001181895.1 395402 R 319224 CDS YP_001181896.1 146291472 5081299 397183..399084 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: shm:Shewmr7_3771 GAF modulated sigma54 specific transcriptional regulator, fis family; Fis family GAF modulated sigma54 specific transcriptional regulator 399084 5081299 Sputcn32_0365 Shewanella putrefaciens CN-32 Fis family GAF modulated sigma54 specific transcriptional regulator YP_001181896.1 397183 D 319224 CDS YP_001181897.1 146291473 5081300 complement(399127..400476) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4478 sensor protein CpxA; integral membrane sensor signal transduction histidine kinase 400476 5081300 Sputcn32_0366 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001181897.1 399127 R 319224 CDS YP_001181898.1 146291474 5081301 complement(400491..401177) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4477 transcriptional regulatory protein CpxR; two component transcriptional regulator 401177 5081301 Sputcn32_0367 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001181898.1 400491 R 319224 CDS YP_001181899.1 146291475 5081302 401444..401935 1 NC_009438.1 PFAM: protein of unknown function, Spy-related; KEGG: she:Shewmr4_0253 protein of unknown function, Spy-related; hypothetical protein 401935 5081302 Sputcn32_0368 Shewanella putrefaciens CN-32 hypothetical protein YP_001181899.1 401444 D 319224 CDS YP_001181900.1 146291476 5081303 401986..402867 1 NC_009438.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: shm:Shewmr7_3767 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 402867 5081303 Sputcn32_0369 Shewanella putrefaciens CN-32 cation diffusion facilitator family transporter YP_001181900.1 401986 D 319224 CDS YP_001181901.1 146291477 5081304 402886..403347 1 NC_009438.1 KEGG: she:Shewmr4_0255 hypothetical protein; hypothetical protein 403347 5081304 Sputcn32_0370 Shewanella putrefaciens CN-32 hypothetical protein YP_001181901.1 402886 D 319224 CDS YP_001181902.1 146291478 5081305 complement(403434..404846) 1 NC_009438.1 KEGG: shm:Shewmr7_3764 nitrogen metabolism transcriptional regulator, NtrC, fis family; TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; nitrogen metabolism transcriptional regulator, NtrC, Fis family 404846 5081305 Sputcn32_0371 Shewanella putrefaciens CN-32 nitrogen metabolism transcriptional regulator, NtrC, Fis family YP_001181902.1 403434 R 319224 CDS YP_001181903.1 146291479 5081306 complement(404884..405930) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold-4 domain protein; KEGG: shm:Shewmr7_3763 signal transduction histidine kinase, nitrogen specific, NtrB; signal transduction histidine kinase, nitrogen specific, NtrB 405930 5081306 Sputcn32_0372 Shewanella putrefaciens CN-32 signal transduction histidine kinase, nitrogen specific, NtrB YP_001181903.1 404884 R 319224 CDS YP_001181904.1 146291480 5081307 complement(406052..406591) 1 NC_009438.1 KEGG: shm:Shewmr7_3762 hypothetical protein; hypothetical protein 406591 5081307 Sputcn32_0373 Shewanella putrefaciens CN-32 hypothetical protein YP_001181904.1 406052 R 319224 CDS YP_001181905.1 146291481 5081308 complement(406777..407139) 1 NC_009438.1 KEGG: sdn:Sden_1385 glutathione S-transferase-like protein; glutathione S-transferase-like protein 407139 5081308 Sputcn32_0374 Shewanella putrefaciens CN-32 glutathione S-transferase-like protein YP_001181905.1 406777 R 319224 CDS YP_001181906.1 146291482 5081309 complement(407300..407665) 1 NC_009438.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: vvu:VV20508 glutathione S-transferase; glutathione S-transferase domain-containing protein 407665 5081309 Sputcn32_0375 Shewanella putrefaciens CN-32 glutathione S-transferase domain-containing protein YP_001181906.1 407300 R 319224 CDS YP_001181907.1 146291483 5081310 complement(407799..408491) 1 NC_009438.1 PFAM: ThiJ/PfpI domain protein; KEGG: psb:Psyr_3319 ThiJ/PfpI; ThiJ/PfpI domain-containing protein 408491 5081310 Sputcn32_0376 Shewanella putrefaciens CN-32 ThiJ/PfpI domain-containing protein YP_001181907.1 407799 R 319224 CDS YP_001181908.1 146291484 5081311 complement(408563..409720) 1 NC_009438.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO4469 alcohol dehydrogenase, iron-containing; iron-containing alcohol dehydrogenase 409720 5081311 Sputcn32_0377 Shewanella putrefaciens CN-32 iron-containing alcohol dehydrogenase YP_001181908.1 408563 R 319224 CDS YP_001181909.1 146291485 5081312 complement(409863..410471) 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_3760 transcriptional regulator, TetR family; TetR family transcriptional regulator 410471 5081312 Sputcn32_0378 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001181909.1 409863 R 319224 CDS YP_001181910.1 146291486 5081313 complement(410754..411065) 1 NC_009438.1 PFAM: protein of unknown function DUF1255; KEGG: shm:Shewmr7_3759 protein of unknown function DUF1255; hypothetical protein 411065 5081313 Sputcn32_0379 Shewanella putrefaciens CN-32 hypothetical protein YP_001181910.1 410754 R 319224 CDS YP_001181911.1 146291487 5081314 411424..413379 1 NC_009438.1 PFAM: chemotaxis sensory transducer; KEGG: shm:Shewmr7_3758 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 413379 5081314 Sputcn32_0380 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001181911.1 411424 D 319224 CDS YP_001181912.1 146291488 5081315 complement(413512..415629) 1 NC_009438.1 PFAM: protein of unknown function DUF323; Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_3757 protein of unknown function DUF323; hypothetical protein 415629 5081315 Sputcn32_0381 Shewanella putrefaciens CN-32 hypothetical protein YP_001181912.1 413512 R 319224 CDS YP_001181913.1 146291489 5081316 415995..416390 1 NC_009438.1 KEGG: she:Shewmr4_0265 hypothetical protein; hypothetical protein 416390 5081316 Sputcn32_0382 Shewanella putrefaciens CN-32 hypothetical protein YP_001181913.1 415995 D 319224 CDS YP_001181914.1 146291490 5081317 416767..417621 1 NC_009438.1 PFAM: PfkB domain protein; KEGG: son:SO4458 carbohydrate kinase, PfkB family; ribokinase-like domain-containing protein 417621 5081317 Sputcn32_0383 Shewanella putrefaciens CN-32 ribokinase-like domain-containing protein YP_001181914.1 416767 D 319224 CDS YP_001181915.1 146291491 5081318 417926..419386 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO4457 GGDEF domain protein; diguanylate cyclase 419386 5081318 Sputcn32_0384 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001181915.1 417926 D 319224 CDS YP_001181916.1 146291492 5081319 419515..420210 1 NC_009438.1 PFAM: 3-alpha; MOSC domain containing protein; KEGG: she:Shewmr4_0269 MOSC domain containing protein; MOSC domain-containing protein 420210 5081319 Sputcn32_0385 Shewanella putrefaciens CN-32 MOSC domain-containing protein YP_001181916.1 419515 D 319224 CDS YP_001181917.1 146291493 5081320 420247..420603 1 NC_009438.1 KEGG: shm:Shewmr7_3751 hypothetical protein; hypothetical protein 420603 5081320 Sputcn32_0386 Shewanella putrefaciens CN-32 hypothetical protein YP_001181917.1 420247 D 319224 CDS YP_001181918.1 146291494 5081321 complement(420671..422587) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_3750 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 422587 5081321 Sputcn32_0387 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001181918.1 420671 R 319224 CDS YP_001181919.1 146291495 5081322 complement(422933..424582) 1 NC_009438.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: shm:Shewmr7_3749 electron-transferring-flavoprotein dehydrogenase; electron-transferring-flavoprotein dehydrogenase 424582 5081322 Sputcn32_0388 Shewanella putrefaciens CN-32 electron-transferring-flavoprotein dehydrogenase YP_001181919.1 422933 R 319224 CDS YP_001181920.1 146291496 5081323 424919..425932 1 NC_009438.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 425932 moaA 5081323 moaA Shewanella putrefaciens CN-32 molybdenum cofactor biosynthesis protein A YP_001181920.1 424919 D 319224 CDS YP_001181921.1 146291497 5081324 426030..426506 1 NC_009438.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 426506 moaC 5081324 moaC Shewanella putrefaciens CN-32 molybdenum cofactor biosynthesis protein MoaC YP_001181921.1 426030 D 319224 CDS YP_001181922.1 146291498 5081325 426530..426781 1 NC_009438.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: son:SO4450 molybdenum cofactor biosynthesis protein D; molybdopterin converting factor subunit 1 426781 5081325 Sputcn32_0391 Shewanella putrefaciens CN-32 molybdopterin converting factor subunit 1 YP_001181922.1 426530 D 319224 CDS YP_001181923.1 146291499 5081326 426783..427244 1 NC_009438.1 PFAM: molybdopterin biosynthesis MoaE; KEGG: she:Shewmr4_0276 molybdopterin biosynthesis MoaE; molybdopterin biosynthesis MoaE 427244 5081326 Sputcn32_0392 Shewanella putrefaciens CN-32 molybdopterin biosynthesis MoaE YP_001181923.1 426783 D 319224 CDS YP_001181924.1 146291500 5081377 427301..428113 1 NC_009438.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: she:Shewmr4_0277 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdenum ABC transporter periplasmic molybdate-binding protein 428113 5081377 Sputcn32_0393 Shewanella putrefaciens CN-32 molybdenum ABC transporter periplasmic molybdate-binding protein YP_001181924.1 427301 D 319224 CDS YP_001181925.1 146291501 5081378 428110..428793 1 NC_009438.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_3743 molybdate ABC transporter, inner membrane subunit; molybdate ABC transporter inner membrane subunit 428793 5081378 Sputcn32_0394 Shewanella putrefaciens CN-32 molybdate ABC transporter inner membrane subunit YP_001181925.1 428110 D 319224 CDS YP_001181926.1 146291502 5081379 428774..429877 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3742 ABC transporter related; ABC transporter-like protein 429877 5081379 Sputcn32_0395 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001181926.1 428774 D 319224 CDS YP_001181927.1 146291503 5081380 430094..430615 1 NC_009438.1 KEGG: shm:Shewmr7_3741 hypothetical protein; hypothetical protein 430615 5081380 Sputcn32_0396 Shewanella putrefaciens CN-32 hypothetical protein YP_001181927.1 430094 D 319224 CDS YP_001181928.1 146291504 5081381 430657..431334 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4428 DNA-binding response regulator; two component transcriptional regulator 431334 5081381 Sputcn32_0397 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001181928.1 430657 D 319224 CDS YP_001181929.1 146291505 5081382 431384..432640 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4427 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 432640 5081382 Sputcn32_0398 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001181929.1 431384 D 319224 CDS YP_001181930.1 146291506 5081383 432674..433363 1 NC_009438.1 TIGRFAM: pseudouridine synthase Rlu family protein, TIGR01621; PFAM: pseudouridine synthase; KEGG: she:Shewmr4_0283 pseudouridine synthase Rlu family protein, TIGR01621; pseudouridine synthase Rlu family protein 433363 5081383 Sputcn32_0399 Shewanella putrefaciens CN-32 pseudouridine synthase Rlu family protein YP_001181930.1 432674 D 319224 CDS YP_001181931.1 146291507 5081384 433484..433651 1 NC_009438.1 PFAM: protein of unknown function UPF0057; KEGG: shm:Shewmr7_3736 protein of unknown function UPF0057; hypothetical protein 433651 5081384 Sputcn32_0400 Shewanella putrefaciens CN-32 hypothetical protein YP_001181931.1 433484 D 319224 CDS YP_001181932.1 146291508 5081385 complement(433725..435896) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_0286 TonB-dependent receptor; TonB-dependent receptor 435896 5081385 Sputcn32_0401 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001181932.1 433725 R 319224 CDS YP_001181933.1 146291509 5081386 436216..436380 1 NC_009438.1 KEGG: son:SO4421 hypothetical protein; hypothetical protein 436380 5081386 Sputcn32_0402 Shewanella putrefaciens CN-32 hypothetical protein YP_001181933.1 436216 D 319224 CDS YP_001181934.1 146291510 5081387 complement(436397..436909) 1 NC_009438.1 PFAM: peptidase M23B; KEGG: son:SO4420 peptidase, M23/M37 family; peptidase M23B 436909 5081387 Sputcn32_0403 Shewanella putrefaciens CN-32 peptidase M23B YP_001181934.1 436397 R 319224 CDS YP_001181935.1 146291511 5081388 complement(436949..437527) 1 NC_009438.1 KEGG: son:SO4419 hypothetical protein; hypothetical protein 437527 5081388 Sputcn32_0404 Shewanella putrefaciens CN-32 hypothetical protein YP_001181935.1 436949 R 319224 CDS YP_001181936.1 146291512 5081389 complement(437533..438180) 1 NC_009438.1 PFAM: CHAP domain containing protein; KEGG: son:SO4418 trypanothione synthetase domain protein; CHAP domain-containing protein 438180 5081389 Sputcn32_0405 Shewanella putrefaciens CN-32 CHAP domain-containing protein YP_001181936.1 437533 R 319224 CDS YP_001181937.1 146291513 5081390 438489..439667 1 NC_009438.1 KEGG: she:Shewmr4_0294 hypothetical protein; hypothetical protein 439667 5081390 Sputcn32_0406 Shewanella putrefaciens CN-32 hypothetical protein YP_001181937.1 438489 D 319224 CDS YP_001181938.1 146291514 5081391 439672..440793 1 NC_009438.1 PFAM: aminotransferase, class V; KEGG: shm:Shewmr7_3724 aminotransferase, class V; class V aminotransferase 440793 5081391 Sputcn32_0407 Shewanella putrefaciens CN-32 class V aminotransferase YP_001181938.1 439672 D 319224 CDS YP_001181939.1 146291515 5081392 complement(440882..441205) 1 NC_009438.1 KEGG: son:SO4412 hypothetical protein; hypothetical protein 441205 5081392 Sputcn32_0408 Shewanella putrefaciens CN-32 hypothetical protein YP_001181939.1 440882 R 319224 CDS YP_001181940.1 146291516 5081393 441571..441765 1 NC_009438.1 KEGG: she:Shewmr4_1960 hypothetical protein; hypothetical protein 441765 5081393 Sputcn32_0409 Shewanella putrefaciens CN-32 hypothetical protein YP_001181940.1 441571 D 319224 CDS YP_001181941.1 146291517 5081394 441963..442835 1 NC_009438.1 KEGG: vch:VCA0021 hypothetical protein; hypothetical protein 442835 5081394 Sputcn32_0410 Shewanella putrefaciens CN-32 hypothetical protein YP_001181941.1 441963 D 319224 CDS YP_001181942.1 146291518 5081395 443018..443890 1 NC_009438.1 KEGG: vch:VCA0021 hypothetical protein; hypothetical protein 443890 5081395 Sputcn32_0411 Shewanella putrefaciens CN-32 hypothetical protein YP_001181942.1 443018 D 319224 CDS YP_001181943.1 146291519 5081396 complement(444209..445618) 1 NC_009438.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 445618 glnA 5081396 glnA Shewanella putrefaciens CN-32 glutamine synthetase YP_001181943.1 444209 R 319224 CDS YP_001181944.1 146291520 5081397 446653..448464 1 NC_009438.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor, GTP-binding; elongation factor Tu, domain 2 protein; KEGG: son:SO4408 virulence regulator BipA; GTP-binding protein TypA 448464 5081397 Sputcn32_0413 Shewanella putrefaciens CN-32 GTP-binding protein TypA YP_001181944.1 446653 D 319224 CDS YP_001181945.1 146291521 5081398 complement(448536..449576) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO4407 GGDEF family protein; diguanylate cyclase 449576 5081398 Sputcn32_0414 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001181945.1 448536 R 319224 CDS YP_001181946.1 146291522 5081399 449985..452171 1 NC_009438.1 KEGG: she:Shewmr4_0311 catalase/peroxidase HPI; TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI 452171 5081399 Sputcn32_0415 Shewanella putrefaciens CN-32 catalase/peroxidase HPI YP_001181946.1 449985 D 319224 CDS YP_001181947.1 146291523 5081400 complement(452242..453456) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_3712 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 453456 5081400 Sputcn32_0416 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001181947.1 452242 R 319224 CDS YP_001181948.1 146291524 5081401 complement(453975..454196) 1 NC_009438.1 KEGG: shm:Shewmr7_3709 hypothetical protein; hypothetical protein 454196 5081401 Sputcn32_0417 Shewanella putrefaciens CN-32 hypothetical protein YP_001181948.1 453975 R 319224 CDS YP_001181949.1 146291525 5081402 454278..455162 1 NC_009438.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 455162 rbn 5081402 rbn Shewanella putrefaciens CN-32 ribonuclease BN YP_001181949.1 454278 D 319224 CDS YP_001181950.1 146291526 5081403 455234..455671 1 NC_009438.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 455671 5081403 Sputcn32_0419 Shewanella putrefaciens CN-32 D-tyrosyl-tRNA(Tyr) deacylase YP_001181950.1 455234 D 319224 CDS YP_001181951.1 146291527 5081404 455761..456210 1 NC_009438.1 TIGRFAM: thioesterase domain, putative; KEGG: son:SO4397 hypothetical acetyltransferase; thioesterase domain-containing protein 456210 5081404 Sputcn32_0420 Shewanella putrefaciens CN-32 thioesterase domain-containing protein YP_001181951.1 455761 D 319224 CDS YP_001181952.1 146291528 5081405 456367..457587 1 NC_009438.1 PFAM: peptidase S1 and S6, chymotrypsin/Hap; KEGG: mag:amb2240 TPR repeat; peptidase S1 and S6, chymotrypsin/Hap 457587 5081405 Sputcn32_0421 Shewanella putrefaciens CN-32 peptidase S1 and S6, chymotrypsin/Hap YP_001181952.1 456367 D 319224 CDS YP_001181953.1 146291529 5081406 457599..458132 1 NC_009438.1 hypothetical protein 458132 5081406 Sputcn32_0422 Shewanella putrefaciens CN-32 hypothetical protein YP_001181953.1 457599 D 319224 CDS YP_001181954.1 146291530 5081407 458321..458917 1 NC_009438.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 458917 5081407 Sputcn32_0423 Shewanella putrefaciens CN-32 azoreductase YP_001181954.1 458321 D 319224 CDS YP_001181955.1 146291531 5081408 complement(459054..459620) 1 NC_009438.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: shm:Shewmr7_3700 transcriptional regulator, XRE family; XRE family transcriptional regulator 459620 5081408 Sputcn32_0424 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001181955.1 459054 R 319224 CDS YP_001181956.1 146291532 5081409 459784..460971 1 NC_009438.1 TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; Xanthine/uracil/vitamin C permease; KEGG: shm:Shewmr7_3699 benzoate transporter; benzoate transporter 460971 5081409 Sputcn32_0425 Shewanella putrefaciens CN-32 benzoate transporter YP_001181956.1 459784 D 319224 CDS YP_001181957.1 146291533 5081410 complement(461022..461498) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_3696 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 461498 5081410 Sputcn32_0426 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001181957.1 461022 R 319224 CDS YP_001181958.1 146291534 5081411 461819..462571 1 NC_009438.1 KEGG: she:Shewmr4_3023 hypothetical protein; hypothetical protein 462571 5081411 Sputcn32_0427 Shewanella putrefaciens CN-32 hypothetical protein YP_001181958.1 461819 D 319224 CDS YP_001181959.1 146291535 5081412 complement(463101..463400) 1 NC_009438.1 PFAM: plasmid stabilization system; KEGG: she:Shewmr4_0332 plasmid stabilization system; plasmid stabilization system protein 463400 5081412 Sputcn32_0428 Shewanella putrefaciens CN-32 plasmid stabilization system protein YP_001181959.1 463101 R 319224 CDS YP_001181960.1 146291536 5081413 complement(463409..463651) 1 NC_009438.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: shm:Shewmr7_3693 prevent-host-death family protein; prevent-host-death family protein 463651 5081413 Sputcn32_0429 Shewanella putrefaciens CN-32 prevent-host-death family protein YP_001181960.1 463409 R 319224 CDS YP_001181961.1 146291537 5081414 complement(463931..464674) 1 NC_009438.1 KEGG: she:Shewmr4_0334 hypothetical protein; hypothetical protein 464674 5081414 Sputcn32_0430 Shewanella putrefaciens CN-32 hypothetical protein YP_001181961.1 463931 R 319224 CDS YP_001181962.1 146291538 5081415 complement(464706..465965) 1 NC_009438.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 465965 5081415 Sputcn32_0431 Shewanella putrefaciens CN-32 3-oxoacyl-(acyl carrier protein) synthase II YP_001181962.1 464706 R 319224 CDS YP_001181963.1 146291539 5081416 complement(465966..466691) 1 NC_009438.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 466691 fabG 5081416 fabG Shewanella putrefaciens CN-32 3-ketoacyl-ACP reductase YP_001181963.1 465966 R 319224 CDS YP_001181964.1 146291540 5081417 complement(466804..467337) 1 NC_009438.1 KEGG: son:SO4381 thioester dehydrase family protein; thioester dehydrase family protein 467337 5081417 Sputcn32_0433 Shewanella putrefaciens CN-32 thioester dehydrase family protein YP_001181964.1 466804 R 319224 CDS YP_001181965.1 146291541 5081418 complement(467342..468559) 1 NC_009438.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 468559 5081418 Sputcn32_0434 Shewanella putrefaciens CN-32 3-oxoacyl-ACP synthase YP_001181965.1 467342 R 319224 CDS YP_001181966.1 146291542 5081419 complement(468588..469352) 1 NC_009438.1 KEGG: she:Shewmr4_0339 hypothetical protein; hypothetical protein 469352 5081419 Sputcn32_0435 Shewanella putrefaciens CN-32 hypothetical protein YP_001181966.1 468588 R 319224 CDS YP_001181967.1 146291543 5081420 complement(469357..470646) 1 NC_009438.1 PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: shm:Shewmr7_3686 monooxygenase, FAD-binding protein; FAD dependent oxidoreductase 470646 5081420 Sputcn32_0436 Shewanella putrefaciens CN-32 FAD dependent oxidoreductase YP_001181967.1 469357 R 319224 CDS YP_001181968.1 146291544 5081421 complement(470670..473111) 1 NC_009438.1 KEGG: she:Shewmr4_0341 hypothetical protein; hypothetical protein 473111 5081421 Sputcn32_0437 Shewanella putrefaciens CN-32 hypothetical protein YP_001181968.1 470670 R 319224 CDS YP_001181969.1 146291545 5081422 complement(473114..473881) 1 NC_009438.1 KEGG: son:SO4376 hypothetical protein; hypothetical protein 473881 5081422 Sputcn32_0438 Shewanella putrefaciens CN-32 hypothetical protein YP_001181969.1 473114 R 319224 CDS YP_001181970.1 146291546 5081423 complement(473878..474312) 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_3683 thioesterase superfamily protein; thioesterase superfamily protein 474312 5081423 Sputcn32_0439 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001181970.1 473878 R 319224 CDS YP_001181971.1 146291547 5081424 complement(474309..475883) 1 NC_009438.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: she:Shewmr4_0344 histidine ammonia-lyase; histidine ammonia-lyase 475883 5081424 Sputcn32_0440 Shewanella putrefaciens CN-32 histidine ammonia-lyase YP_001181971.1 474309 R 319224 CDS YP_001181972.1 146291548 5081425 complement(475880..477769) 1 NC_009438.1 PFAM: glycosyl transferase, family 2; lipid A biosynthesis acyltransferase; KEGG: shm:Shewmr7_3681 glycosyl transferase, family 2; glycosyl transferase family protein 477769 5081425 Sputcn32_0441 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001181972.1 475880 R 319224 CDS YP_001181973.1 146291549 5081426 complement(477763..478176) 1 NC_009438.1 KEGG: son:SO4372 thioester dehydrase family protein; thioester dehydrase family protein 478176 5081426 Sputcn32_0442 Shewanella putrefaciens CN-32 thioester dehydrase family protein YP_001181973.1 477763 R 319224 CDS YP_001181974.1 146291550 5080698 complement(478169..479533) 1 NC_009438.1 KEGG: shm:Shewmr7_3679 hypothetical protein; hypothetical protein 479533 5080698 Sputcn32_0443 Shewanella putrefaciens CN-32 hypothetical protein YP_001181974.1 478169 R 319224 CDS YP_001181975.1 146291551 5080699 complement(479530..480078) 1 NC_009438.1 KEGG: son:SO4370 hypothetical protein; hypothetical protein 480078 5080699 Sputcn32_0444 Shewanella putrefaciens CN-32 hypothetical protein YP_001181975.1 479530 R 319224 CDS YP_001181976.1 146291552 5080700 complement(480078..480326) 1 NC_009438.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 480326 5080700 Sputcn32_0445 Shewanella putrefaciens CN-32 acyl carrier protein YP_001181976.1 480078 R 319224 CDS YP_001181977.1 146291553 5080701 complement(480336..480590) 1 NC_009438.1 KEGG: son:SO4368 acyl carrier protein, putative; acyl carrier protein 480590 5080701 Sputcn32_0446 Shewanella putrefaciens CN-32 acyl carrier protein YP_001181977.1 480336 R 319224 CDS YP_001181978.1 146291554 5080702 complement(480574..481449) 1 NC_009438.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_0351 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 481449 5080702 Sputcn32_0447 Shewanella putrefaciens CN-32 phospholipid/glycerol acyltransferase YP_001181978.1 480574 R 319224 CDS YP_001181979.1 146291555 5080703 complement(481442..482185) 1 NC_009438.1 KEGG: she:Shewmr4_0352 hypothetical protein; hypothetical protein 482185 5080703 Sputcn32_0448 Shewanella putrefaciens CN-32 hypothetical protein YP_001181979.1 481442 R 319224 CDS YP_001181980.1 146291556 5080704 complement(482525..483424) 1 NC_009438.1 KEGG: son:SO4365 hypothetical protein; hypothetical protein 483424 5080704 Sputcn32_0449 Shewanella putrefaciens CN-32 hypothetical protein YP_001181980.1 482525 R 319224 CDS YP_001181981.1 146291557 5080705 complement(483607..485697) 1 NC_009438.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 485697 5080705 Sputcn32_0450 Shewanella putrefaciens CN-32 ATP-dependent DNA helicase RecG YP_001181981.1 483607 R 319224 CDS YP_001181982.1 146291558 5080706 485930..486643 1 NC_009438.1 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 486643 5080706 Sputcn32_0451 Shewanella putrefaciens CN-32 multiple drug resistance protein MarC YP_001181982.1 485930 D 319224 CDS YP_001181983.1 146291559 5080707 complement(486761..488206) 1 NC_009438.1 PFAM: OmpA/MotB domain protein; KEGG: she:Shewmr4_0916 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 488206 5080707 Sputcn32_0452 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001181983.1 486761 R 319224 CDS YP_001181984.1 146291560 5080708 488359..488712 1 NC_009438.1 hypothetical protein 488712 5080708 Sputcn32_0453 Shewanella putrefaciens CN-32 hypothetical protein YP_001181984.1 488359 D 319224 CDS YP_001181985.1 146291561 5080709 489267..489623 1 NC_009438.1 hypothetical protein 489623 5080709 Sputcn32_0454 Shewanella putrefaciens CN-32 hypothetical protein YP_001181985.1 489267 D 319224 CDS YP_001181986.1 146291562 5080710 complement(489949..490812) 1 NC_009438.1 PFAM: YicC N-terminal domain protein; domain of unknown function DUF1732; KEGG: shm:Shewmr7_0351 hypothetical protein; hypothetical protein 490812 5080710 Sputcn32_0455 Shewanella putrefaciens CN-32 hypothetical protein YP_001181986.1 489949 R 319224 CDS YP_001181987.1 146291563 5080711 491350..492063 1 NC_009438.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 492063 rph 5080711 rph Shewanella putrefaciens CN-32 ribonuclease PH YP_001181987.1 491350 D 319224 CDS YP_001181988.1 146291564 5080712 492231..492872 1 NC_009438.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 492872 pyrE 5080712 pyrE Shewanella putrefaciens CN-32 orotate phosphoribosyltransferase YP_001181988.1 492231 D 319224 CDS YP_001181989.1 146291565 5080713 complement(492931..493575) 1 NC_009438.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 493575 folE 5080713 folE Shewanella putrefaciens CN-32 GTP cyclohydrolase I YP_001181989.1 492931 R 319224 CDS YP_001181990.1 146291566 5080714 complement(493799..494392) 1 NC_009438.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 494392 slmA 5080714 slmA Shewanella putrefaciens CN-32 nucleoid occlusion protein YP_001181990.1 493799 R 319224 CDS YP_001181991.1 146291567 5080715 complement(494425..494883) 1 NC_009438.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 494883 dut 5080715 dut Shewanella putrefaciens CN-32 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_001181991.1 494425 R 319224 CDS YP_001181992.1 146291568 5080716 complement(494880..496100) 1 NC_009438.1 KEGG: shm:Shewmr7_0358 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 496100 5080716 Sputcn32_0461 Shewanella putrefaciens CN-32 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001181992.1 494880 R 319224 CDS YP_001181993.1 146291569 5080717 496223..496900 1 NC_009438.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 496900 radC 5080717 radC Shewanella putrefaciens CN-32 DNA repair protein RadC YP_001181993.1 496223 D 319224 CDS YP_001181994.1 146291570 5080718 497022..497258 1 NC_009438.1 required for 70S ribosome assembly; 50S ribosomal protein L28 497258 rpmB 5080718 rpmB Shewanella putrefaciens CN-32 50S ribosomal protein L28 YP_001181994.1 497022 D 319224 CDS YP_001181995.1 146291571 5080719 497265..497438 1 NC_009438.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 497438 rpmG 5080719 rpmG Shewanella putrefaciens CN-32 50S ribosomal protein L33 YP_001181995.1 497265 D 319224 CDS YP_001181996.1 146291572 5080720 497762..499081 1 NC_009438.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 499081 5080720 Sputcn32_0465 Shewanella putrefaciens CN-32 N-acetylglutamate synthase YP_001181996.1 497762 D 319224 CDS YP_001181997.1 146291573 5080721 499197..499715 1 NC_009438.1 KEGG: son:SO4244 hypothetical protein; hypothetical protein 499715 5080721 Sputcn32_0466 Shewanella putrefaciens CN-32 hypothetical protein YP_001181997.1 499197 D 319224 CDS YP_001181998.1 146291574 5080722 complement(499762..500646) 1 NC_009438.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4243 rarD protein; transporter DMT superfamily protein 500646 5080722 Sputcn32_0467 Shewanella putrefaciens CN-32 transporter DMT superfamily protein YP_001181998.1 499762 R 319224 CDS YP_001181999.1 146291575 5080723 complement(500839..501303) 1 NC_009438.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: she:Shewmr4_3591 uncharacterized domain 1; hypothetical protein 501303 5080723 Sputcn32_0468 Shewanella putrefaciens CN-32 hypothetical protein YP_001181999.1 500839 R 319224 CDS YP_001182000.1 146291576 5080724 501600..503423 1 NC_009438.1 KEGG: she:Shewmr4_3590 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 503423 5080724 Sputcn32_0469 Shewanella putrefaciens CN-32 ATP-dependent DNA helicase RecQ YP_001182000.1 501600 D 319224 CDS YP_001182001.1 146291577 5080725 complement(503405..505183) 1 NC_009438.1 SMART: Tetratricopeptide domain protein; KEGG: she:Shewmr4_3589 response regulator receiver protein; hypothetical protein 505183 5080725 Sputcn32_0470 Shewanella putrefaciens CN-32 hypothetical protein YP_001182001.1 503405 R 319224 CDS YP_001182002.1 146291578 5080726 505691..507259 1 NC_009438.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 507259 5080726 Sputcn32_0471 Shewanella putrefaciens CN-32 2-isopropylmalate synthase YP_001182002.1 505691 D 319224 CDS YP_001182003.1 146291579 5080727 507330..508424 1 NC_009438.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 508424 5080727 Sputcn32_0472 Shewanella putrefaciens CN-32 3-isopropylmalate dehydrogenase YP_001182003.1 507330 D 319224 CDS YP_001182004.1 146291580 5080728 508424..509848 1 NC_009438.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 509848 5080728 Sputcn32_0473 Shewanella putrefaciens CN-32 isopropylmalate isomerase large subunit YP_001182004.1 508424 D 319224 CDS YP_001182005.1 146291581 5080729 509876..510481 1 NC_009438.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 510481 leuD 5080729 leuD Shewanella putrefaciens CN-32 isopropylmalate isomerase small subunit YP_001182005.1 509876 D 319224 CDS YP_001182006.1 146291582 5080730 511001..512356 1 NC_009438.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: shm:Shewmr7_0372 membrane protein involved in aromatic hydrocarbon degradation; aromatic hydrocarbon degradation membrane protein 512356 5080730 Sputcn32_0475 Shewanella putrefaciens CN-32 aromatic hydrocarbon degradation membrane protein YP_001182006.1 511001 D 319224 CDS YP_001182007.1 146291583 5080731 512536..514020 1 NC_009438.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: son:SO4230 glycerol kinase; glycerol kinase 514020 5080731 Sputcn32_0476 Shewanella putrefaciens CN-32 glycerol kinase YP_001182007.1 512536 D 319224 CDS YP_001182008.1 146291584 5080732 complement(514127..514456) 1 NC_009438.1 KEGG: shm:Shewmr7_0374 hypothetical protein; hypothetical protein 514456 5080732 Sputcn32_0477 Shewanella putrefaciens CN-32 hypothetical protein YP_001182008.1 514127 R 319224 CDS YP_001182009.1 146291585 5080733 514915..515373 1 NC_009438.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 515373 5080733 Sputcn32_0478 Shewanella putrefaciens CN-32 cell division protein MraZ YP_001182009.1 514915 D 319224 CDS YP_001182010.1 146291586 5080734 515405..516346 1 NC_009438.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: shm:Shewmr7_0378 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 516346 mraW 5080734 mraW Shewanella putrefaciens CN-32 S-adenosyl-methyltransferase MraW YP_001182010.1 515405 D 319224 CDS YP_001182011.1 146291587 5080735 516357..516671 1 NC_009438.1 PFAM: cell division protein FtsL; KEGG: she:Shewmr4_3577 cell division protein FtsL; cell division protein FtsL 516671 5080735 Sputcn32_0480 Shewanella putrefaciens CN-32 cell division protein FtsL YP_001182011.1 516357 D 319224 CDS YP_001182012.1 146291588 5080736 516685..518436 1 NC_009438.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: son:SO4225 peptidoglycan synthetase FtsI; peptidoglycan glycosyltransferase 518436 5080736 Sputcn32_0481 Shewanella putrefaciens CN-32 peptidoglycan glycosyltransferase YP_001182012.1 516685 D 319224 CDS YP_001182013.1 146291589 5080737 518433..519935 1 NC_009438.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 519935 murE 5080737 murE Shewanella putrefaciens CN-32 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_001182013.1 518433 D 319224 CDS YP_001182014.1 146291590 5080738 519932..521314 1 NC_009438.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: son:SO4223 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 521314 5080738 Sputcn32_0483 Shewanella putrefaciens CN-32 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase YP_001182014.1 519932 D 319224 CDS YP_001182015.1 146291591 5080739 521315..522397 1 NC_009438.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 522397 mraY 5080739 mraY Shewanella putrefaciens CN-32 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_001182015.1 521315 D 319224 CDS YP_001182016.1 146291592 5080740 522404..523723 1 NC_009438.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 523723 murD 5080740 murD Shewanella putrefaciens CN-32 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_001182016.1 522404 D 319224 CDS YP_001182017.1 146291593 5080741 523713..524924 1 NC_009438.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: son:SO4220 cell division protein FtsW; cell division protein FtsW 524924 5080741 Sputcn32_0486 Shewanella putrefaciens CN-32 cell division protein FtsW YP_001182017.1 523713 D 319224 CDS YP_001182018.1 146291594 5080742 524924..526012 1 NC_009438.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 526012 murG 5080742 murG Shewanella putrefaciens CN-32 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_001182018.1 524924 D 319224 CDS YP_001182019.1 146291595 5080743 526015..527481 1 NC_009438.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 527481 murC 5080743 murC Shewanella putrefaciens CN-32 UDP-N-acetylmuramate--L-alanine ligase YP_001182019.1 526015 D 319224 CDS YP_001182020.1 146291596 5080744 527633..528382 1 NC_009438.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein, FtsQ-type; KEGG: shm:Shewmr7_0388 polypeptide-transport-associated domain protein, FtsQ-type; polypeptide-transport-associated domain-containing protein 528382 5080744 Sputcn32_0489 Shewanella putrefaciens CN-32 polypeptide-transport-associated domain-containing protein YP_001182020.1 527633 D 319224 CDS YP_001182021.1 146291597 5080745 528363..529598 1 NC_009438.1 PFAM: cell division protein FtsA; KEGG: shm:Shewmr7_0389 cell division protein FtsA; cell division protein FtsA 529598 5080745 Sputcn32_0490 Shewanella putrefaciens CN-32 cell division protein FtsA YP_001182021.1 528363 D 319224 CDS YP_001182022.1 146291598 5080746 529632..530819 1 NC_009438.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 530819 5080746 Sputcn32_0491 Shewanella putrefaciens CN-32 cell division protein FtsZ YP_001182022.1 529632 D 319224 CDS YP_001182023.1 146291599 5080747 531000..531920 1 NC_009438.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 531920 lpxC 5080747 lpxC Shewanella putrefaciens CN-32 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_001182023.1 531000 D 319224 CDS YP_001182024.1 146291600 5078434 complement(531932..532378) 1 NC_009438.1 KEGG: shm:Shewmr7_0392 hypothetical protein; hypothetical protein 532378 5078434 Sputcn32_0493 Shewanella putrefaciens CN-32 hypothetical protein YP_001182024.1 531932 R 319224 CDS YP_001182025.1 146291601 5078435 532406..533305 1 NC_009438.1 PFAM: peptidase M23B; KEGG: shm:Shewmr7_0393 peptidase M23B; peptidase M23B 533305 5078435 Sputcn32_0494 Shewanella putrefaciens CN-32 peptidase M23B YP_001182025.1 532406 D 319224 CDS YP_001182026.1 146291602 5078436 533366..536095 1 NC_009438.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 536095 5078436 Sputcn32_0495 Shewanella putrefaciens CN-32 preprotein translocase subunit SecA YP_001182026.1 533366 D 319224 CDS YP_001182027.1 146291603 5078444 complement(542884..543285) 1 NC_009438.1 KEGG: sfr:Sfri_1559 ISSod10, transposase OrfB; hypothetical protein 543285 5078444 Sputcn32_0496 Shewanella putrefaciens CN-32 hypothetical protein YP_001182027.1 542884 R 319224 CDS YP_001182028.1 146291604 5078445 complement(543297..544304) 1 NC_009438.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 544304 5078445 Sputcn32_0497 Shewanella putrefaciens CN-32 delta-aminolevulinic acid dehydratase YP_001182028.1 543297 R 319224 CDS YP_001182029.1 146291605 5078446 complement(544314..546188) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; Diverse 7TM receptor, extracellular region 2; Diverse 7TM receptor, transmembrane region; KEGG: son:SO4207 GGDEF domain protein; diguanylate cyclase 546188 5078446 Sputcn32_0498 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001182029.1 544314 R 319224 CDS YP_001182030.1 146291606 5078447 complement(546181..546984) 1 NC_009438.1 PFAM: TatD-related deoxyribonuclease; KEGG: shm:Shewmr7_0398 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 546984 5078447 Sputcn32_0499 Shewanella putrefaciens CN-32 TatD-related deoxyribonuclease YP_001182030.1 546181 R 319224 CDS YP_001182031.1 146291607 5078448 complement(546984..547511) 1 NC_009438.1 KEGG: son:SO4205 hypothetical protein; hypothetical protein 547511 5078448 Sputcn32_0500 Shewanella putrefaciens CN-32 hypothetical protein YP_001182031.1 546984 R 319224 CDS YP_001182032.1 146291608 5078449 complement(547558..548307) 1 NC_009438.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: she:Shewmr4_3556 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 548307 5078449 Sputcn32_0501 Shewanella putrefaciens CN-32 Sec-independent protein translocase subunit TatC YP_001182032.1 547558 R 319224 CDS YP_001182033.1 146291609 5078450 complement(548311..548787) 1 NC_009438.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: shm:Shewmr7_0401 twin-arginine translocation protein, TatB subunit; twin-arginine translocation protein subunit TatB 548787 5078450 Sputcn32_0502 Shewanella putrefaciens CN-32 twin-arginine translocation protein subunit TatB YP_001182033.1 548311 R 319224 CDS YP_001182034.1 146291610 5078451 complement(548795..549034) 1 NC_009438.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: shm:Shewmr7_0402 twin-arginine translocation protein, TatA/E family subunit; twin arginine-targeting protein translocase 549034 5078451 Sputcn32_0503 Shewanella putrefaciens CN-32 twin arginine-targeting protein translocase YP_001182034.1 548795 R 319224 CDS YP_001182035.1 146291611 5078452 complement(549094..550743) 1 NC_009438.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: shm:Shewmr7_0403 2-polyprenylphenol 6-hydroxylase; 2-polyprenylphenol 6-hydroxylase 550743 5078452 Sputcn32_0504 Shewanella putrefaciens CN-32 2-polyprenylphenol 6-hydroxylase YP_001182035.1 549094 R 319224 CDS YP_001182036.1 146291612 5078453 complement(550740..551360) 1 NC_009438.1 PFAM: protein of unknown function DUF1243; KEGG: she:Shewmr4_3552 protein of unknown function DUF1243; hypothetical protein 551360 5078453 Sputcn32_0505 Shewanella putrefaciens CN-32 hypothetical protein YP_001182036.1 550740 R 319224 CDS YP_001182037.1 146291613 5078454 complement(551360..552115) 1 NC_009438.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO4199 ubiquinone/menaquinone biosynthesis methlytransferase UbiE; ubiquinone/menaquinone biosynthesis methyltransferase 552115 5078454 Sputcn32_0506 Shewanella putrefaciens CN-32 ubiquinone/menaquinone biosynthesis methyltransferase YP_001182037.1 551360 R 319224 CDS YP_001182038.1 146291614 5078455 complement(552360..553424) 1 NC_009438.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: she:Shewmr4_3550 arginase/agmatinase/formiminoglutamase; arginase/agmatinase/formiminoglutamase 553424 5078455 Sputcn32_0507 Shewanella putrefaciens CN-32 arginase/agmatinase/formiminoglutamase YP_001182038.1 552360 R 319224 CDS YP_001182039.1 146291615 5078456 complement(553552..554037) 1 NC_009438.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 554037 5078456 Sputcn32_0508 Shewanella putrefaciens CN-32 ribonuclease activity regulator protein RraA YP_001182039.1 553552 R 319224 CDS YP_001182040.1 146291616 5078457 554356..554610 1 NC_009438.1 KEGG: shm:Shewmr7_0408 hypothetical protein; hypothetical protein 554610 5078457 Sputcn32_0509 Shewanella putrefaciens CN-32 hypothetical protein YP_001182040.1 554356 D 319224 CDS YP_001182041.1 146291617 5078036 554971..555483 1 NC_009438.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: son:SO4195 PAP2 family protein; PA-phosphatase-like phosphoesterase 555483 5078036 Sputcn32_0510 Shewanella putrefaciens CN-32 PA-phosphatase-like phosphoesterase YP_001182041.1 554971 D 319224 CDS YP_001182042.1 146291618 5078037 555557..556597 1 NC_009438.1 KEGG: shm:Shewmr7_0410 hypothetical protein; hypothetical protein 556597 5078037 Sputcn32_0511 Shewanella putrefaciens CN-32 hypothetical protein YP_001182042.1 555557 D 319224 CDS YP_001182043.1 146291619 5078038 556739..558157 1 NC_009438.1 KEGG: she:Shewmr4_3545 hypothetical protein; hypothetical protein 558157 5078038 Sputcn32_0512 Shewanella putrefaciens CN-32 hypothetical protein YP_001182043.1 556739 D 319224 CDS YP_001182044.1 146291620 5078039 complement(558265..559893) 1 NC_009438.1 PFAM: chemotaxis sensory transducer; KEGG: ilo:IL1068 methyl-accepting chemotaxis protein with ligand-binding sensor domain and HAMP domain; methyl-accepting chemotaxis sensory transducer 559893 5078039 Sputcn32_0513 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182044.1 558265 R 319224 CDS YP_001182045.1 146291621 5078040 complement(560099..560713) 1 NC_009438.1 KEGG: shm:Shewmr7_0412 DedA family protein; DedA family protein 560713 5078040 Sputcn32_0514 Shewanella putrefaciens CN-32 DedA family protein YP_001182045.1 560099 R 319224 CDS YP_001182046.1 146291622 5078041 complement(560912..561832) 1 NC_009438.1 catalyzes the hydrolysis of pyrophosphate to phosphate; putative manganese-dependent inorganic pyrophosphatase 561832 5078041 Sputcn32_0515 Shewanella putrefaciens CN-32 putative manganese-dependent inorganic pyrophosphatase YP_001182046.1 560912 R 319224 CDS YP_001182047.1 146291623 5078042 complement(561969..562430) 1 NC_009438.1 PFAM: conserved hypothetical protein 22; KEGG: shm:Shewmr7_0414 conserved hypothetical protein 22; hypothetical protein 562430 5078042 Sputcn32_0516 Shewanella putrefaciens CN-32 hypothetical protein YP_001182047.1 561969 R 319224 CDS YP_001182048.1 146291624 5078043 complement(562566..565019) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_3540 TonB-dependent receptor; TonB-dependent receptor 565019 5078043 Sputcn32_0517 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001182048.1 562566 R 319224 CDS YP_001182049.1 146291625 5078044 565272..565847 1 NC_009438.1 KEGG: son:SO4182 ATP-dependent protease La (LON) domain protein, putative; ATP-dependent protease La 565847 5078044 Sputcn32_0518 Shewanella putrefaciens CN-32 ATP-dependent protease La YP_001182049.1 565272 D 319224 CDS YP_001182050.1 146291626 5078045 565901..566818 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: shm:Shewmr7_0418 pseudouridine synthase; pseudouridine synthase 566818 5078045 Sputcn32_0519 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001182050.1 565901 D 319224 CDS YP_001182051.1 146291627 5078046 566933..568237 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: she:Shewmr4_3530 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 568237 5078046 Sputcn32_0520 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001182051.1 566933 D 319224 CDS YP_001182052.1 146291628 5078047 568234..568785 1 NC_009438.1 PFAM: response regulator receiver; helix-turn-helix, Fis-type; KEGG: she:Shewmr4_3529 response regulator receiver protein; two component Fis family transcriptional regulator 568785 5078047 Sputcn32_0521 Shewanella putrefaciens CN-32 two component Fis family transcriptional regulator YP_001182052.1 568234 D 319224 CDS YP_001182053.1 146291629 5078048 568817..569293 1 NC_009438.1 KEGG: she:Shewmr4_3528 hypothetical protein; hypothetical protein 569293 5078048 Sputcn32_0522 Shewanella putrefaciens CN-32 hypothetical protein YP_001182053.1 568817 D 319224 CDS YP_001182054.1 146291630 5078049 complement(569342..570049) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: she:Shewmr4_3527 short-chain dehydrogenase/reductase SDR; C factor cell-cell signaling protein 570049 5078049 Sputcn32_0523 Shewanella putrefaciens CN-32 C factor cell-cell signaling protein YP_001182054.1 569342 R 319224 CDS YP_001182055.1 146291631 5078050 complement(570093..571658) 1 NC_009438.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: son:SO4169 hypothetical protein; deoxyribodipyrimidine photolyase-like protein 571658 5078050 Sputcn32_0524 Shewanella putrefaciens CN-32 deoxyribodipyrimidine photolyase-like protein YP_001182055.1 570093 R 319224 CDS YP_001182056.1 146291632 5078051 572243..572953 1 NC_009438.1 hypothetical protein 572953 5078051 Sputcn32_0525 Shewanella putrefaciens CN-32 hypothetical protein YP_001182056.1 572243 D 319224 CDS YP_001182057.1 146291633 5078052 complement(573432..574019) 1 NC_009438.1 KEGG: shm:Shewmr7_0431 hypothetical protein; hypothetical protein 574019 5078052 Sputcn32_0526 Shewanella putrefaciens CN-32 hypothetical protein YP_001182057.1 573432 R 319224 CDS YP_001182058.1 146291634 5078053 complement(574118..574504) 1 NC_009438.1 PFAM: protein of unknown function DUF971; KEGG: she:Shewmr4_3523 protein of unknown function DUF971; hypothetical protein 574504 5078053 Sputcn32_0527 Shewanella putrefaciens CN-32 hypothetical protein YP_001182058.1 574118 R 319224 CDS YP_001182059.1 146291635 5078054 complement(574711..576039) 1 NC_009438.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 576039 hslU 5078054 hslU Shewanella putrefaciens CN-32 ATP-dependent protease ATP-binding subunit HslU YP_001182059.1 574711 R 319224 CDS YP_001182060.1 146291636 5078055 complement(576059..576583) 1 NC_009438.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 576583 5078055 Sputcn32_0529 Shewanella putrefaciens CN-32 ATP-dependent protease peptidase subunit YP_001182060.1 576059 R 319224 CDS YP_001182061.1 146291637 5078056 complement(576734..577312) 1 NC_009438.1 KEGG: son:SO4159 hypothetical protein; hypothetical protein 577312 5078056 Sputcn32_0530 Shewanella putrefaciens CN-32 hypothetical protein YP_001182061.1 576734 R 319224 CDS YP_001182062.1 146291638 5078057 complement(577478..578029) 1 NC_009438.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: lpn:lpg1988 dihydrofolate reductase; deaminase-reductase domain-containing protein 578029 5078057 Sputcn32_0531 Shewanella putrefaciens CN-32 deaminase-reductase domain-containing protein YP_001182062.1 577478 R 319224 CDS YP_001182063.1 146291639 5078058 complement(578040..578321) 1 NC_009438.1 KEGG: she:Shewmr4_3518 hypothetical protein; hypothetical protein 578321 5078058 Sputcn32_0532 Shewanella putrefaciens CN-32 hypothetical protein YP_001182063.1 578040 R 319224 CDS YP_001182064.1 146291640 5078059 complement(578755..579939) 1 NC_009438.1 KEGG: son:SO4160 flagellar biosynthesis protein, putative; flagellar biosynthesis protein 579939 5078059 Sputcn32_0533 Shewanella putrefaciens CN-32 flagellar biosynthesis protein YP_001182064.1 578755 R 319224 CDS YP_001182065.1 146291641 5078060 complement(580151..580753) 1 NC_009438.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: shm:Shewmr7_0436 two component transcriptional regulator, LuxR family; response regulator receiver protein 580753 5078060 Sputcn32_0534 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001182065.1 580151 R 319224 CDS YP_001182066.1 146291642 5078061 581017..582825 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: she:Shewmr4_3516 histidine kinase; histidine kinase 582825 5078061 Sputcn32_0535 Shewanella putrefaciens CN-32 histidine kinase YP_001182066.1 581017 D 319224 CDS YP_001182067.1 146291643 5078062 complement(582855..584012) 1 NC_009438.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO4150 transporter, putative; sulfate transporter 584012 5078062 Sputcn32_0536 Shewanella putrefaciens CN-32 sulfate transporter YP_001182067.1 582855 R 319224 CDS YP_001182068.1 146291644 5078063 complement(584204..584995) 1 NC_009438.1 KEGG: pat:Patl_1924 hypothetical protein; hypothetical protein 584995 5078063 Sputcn32_0537 Shewanella putrefaciens CN-32 hypothetical protein YP_001182068.1 584204 R 319224 CDS YP_001182069.1 146291645 5078064 complement(585195..586733) 1 NC_009438.1 KEGG: son:SO4139 hypothetical protein; hypothetical protein 586733 5078064 Sputcn32_0538 Shewanella putrefaciens CN-32 hypothetical protein YP_001182069.1 585195 R 319224 CDS YP_001182070.1 146291646 5078065 complement(586850..587686) 1 NC_009438.1 PFAM: MscS Mechanosensitive ion channel; KEGG: she:Shewmr4_3509 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 587686 5078065 Sputcn32_0539 Shewanella putrefaciens CN-32 mechanosensitive ion channel protein MscS YP_001182070.1 586850 R 319224 CDS YP_001182071.1 146291647 5078066 587856..588335 1 NC_009438.1 KEGG: shm:Shewmr7_0444 hypothetical protein; hypothetical protein 588335 5078066 Sputcn32_0540 Shewanella putrefaciens CN-32 hypothetical protein YP_001182071.1 587856 D 319224 CDS YP_001182072.1 146291648 5078067 588679..589854 1 NC_009438.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: son:SO4136 decarboxylase, pyridoxal-dependent; diaminopimelate decarboxylase 589854 5078067 Sputcn32_0541 Shewanella putrefaciens CN-32 diaminopimelate decarboxylase YP_001182072.1 588679 D 319224 CDS YP_001182073.1 146291649 5078068 complement(589917..590129) 1 NC_009438.1 PFAM: protein of unknown function DUF465; KEGG: son:SO4134 hypothetical protein; hypothetical protein 590129 5078068 Sputcn32_0542 Shewanella putrefaciens CN-32 hypothetical protein YP_001182073.1 589917 R 319224 CDS YP_001182074.1 146291650 5078069 590665..591423 1 NC_009438.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 591423 5078069 Sputcn32_0543 Shewanella putrefaciens CN-32 uridine phosphorylase YP_001182074.1 590665 D 319224 CDS YP_001182075.1 146291651 5078070 complement(591526..592278) 1 NC_009438.1 KEGG: shm:Shewmr7_0448 hypothetical protein; hypothetical protein 592278 5078070 Sputcn32_0544 Shewanella putrefaciens CN-32 hypothetical protein YP_001182075.1 591526 R 319224 CDS YP_001182076.1 146291652 5078071 592755..593225 1 NC_009438.1 PFAM: protein of unknown function DUF107; KEGG: shm:Shewmr7_0449 protein of unknown function DUF107; hypothetical protein 593225 5078071 Sputcn32_0545 Shewanella putrefaciens CN-32 hypothetical protein YP_001182076.1 592755 D 319224 CDS YP_001182077.1 146291653 5078072 593237..594172 1 NC_009438.1 PFAM: band 7 protein; KEGG: son:SO4129 SPFH domain/Band 7 family protein; hypothetical protein 594172 5078072 Sputcn32_0546 Shewanella putrefaciens CN-32 hypothetical protein YP_001182077.1 593237 D 319224 CDS YP_001182078.1 146291654 5078073 594172..595116 1 NC_009438.1 PFAM: band 7 protein; KEGG: son:SO4128 SPFH domain/Band 7 family protein; hypothetical protein 595116 5078073 Sputcn32_0547 Shewanella putrefaciens CN-32 hypothetical protein YP_001182078.1 594172 D 319224 CDS YP_001182079.1 146291655 5078074 complement(595307..595531) 1 NC_009438.1 KEGG: son:SO4126 hypothetical protein; hypothetical protein 595531 5078074 Sputcn32_0548 Shewanella putrefaciens CN-32 hypothetical protein YP_001182079.1 595307 R 319224 CDS YP_001182080.1 146291656 5078075 complement(595826..596518) 1 NC_009438.1 PFAM: Sporulation domain protein; KEGG: son:SO4124 cell division protein FtsN, putative; sporulation domain-containing protein 596518 5078075 Sputcn32_0549 Shewanella putrefaciens CN-32 sporulation domain-containing protein YP_001182080.1 595826 R 319224 CDS YP_001182081.1 146291657 5078076 complement(596522..598267) 1 NC_009438.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 598267 argS 5078076 argS Shewanella putrefaciens CN-32 arginyl-tRNA synthetase YP_001182081.1 596522 R 319224 CDS YP_001182082.1 146291658 5078077 complement(598378..600573) 1 NC_009438.1 KEGG: she:Shewmr4_3495 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; primosomal protein N' 600573 5078077 Sputcn32_0551 Shewanella putrefaciens CN-32 primosomal protein N' YP_001182082.1 598378 R 319224 CDS YP_001182083.1 146291659 5078078 600641..601543 1 NC_009438.1 KEGG: son:SO4121 hypothetical protein; hypothetical protein 601543 5078078 Sputcn32_0552 Shewanella putrefaciens CN-32 hypothetical protein YP_001182083.1 600641 D 319224 CDS YP_001182084.2 162139380 5078079 601722..601934 1 NC_009438.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 601934 rpmE 5078079 rpmE Shewanella putrefaciens CN-32 50S ribosomal protein L31 YP_001182084.2 601722 D 319224 CDS YP_001182085.1 146291661 5078080 602448..603692 1 NC_009438.1 PFAM: malic enzyme domain protein; malic enzyme, NAD-binding; KEGG: shm:Shewmr7_0460 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); malate dehydrogenase 603692 5078080 Sputcn32_0554 Shewanella putrefaciens CN-32 malate dehydrogenase YP_001182085.1 602448 D 319224 CDS YP_001182086.1 146291662 5078081 603879..605783 1 NC_009438.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 605783 5078081 Sputcn32_0555 Shewanella putrefaciens CN-32 regulatory protein CsrD YP_001182086.1 603879 D 319224 CDS YP_001182087.1 146291663 5078082 606009..606887 1 NC_009438.1 KEGG: son:SO4114.2 hypothetical biogenesis protein MshI; biogenesis protein MshI 606887 5078082 Sputcn32_0556 Shewanella putrefaciens CN-32 biogenesis protein MshI YP_001182087.1 606009 D 319224 CDS YP_001182088.1 146291664 5078083 606884..607486 1 NC_009438.1 KEGG: shm:Shewmr7_0463 hypothetical protein; hypothetical protein 607486 5078083 Sputcn32_0557 Shewanella putrefaciens CN-32 hypothetical protein YP_001182088.1 606884 D 319224 CDS YP_001182089.1 146291665 5078084 607483..608133 1 NC_009438.1 KEGG: shm:Shewmr7_0464 MSHA biogenesis protein MshJ; MSHA biogenesis protein MshJ 608133 5078084 Sputcn32_0558 Shewanella putrefaciens CN-32 MSHA biogenesis protein MshJ YP_001182089.1 607483 D 319224 CDS YP_001182090.1 146291666 5078085 608120..608437 1 NC_009438.1 KEGG: shm:Shewmr7_0465 MSHA biogenesis protein MshK; MSHA biogenesis protein MshK 608437 5078085 Sputcn32_0559 Shewanella putrefaciens CN-32 MSHA biogenesis protein MshK YP_001182090.1 608120 D 319224 CDS YP_001182091.1 146291667 5080598 608452..610128 1 NC_009438.1 TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; Secretin domain protein; Secretin/TonB, short N-terminal domain; KEGG: she:Shewmr4_3486 pilus (MSHA type) biogenesis protein MshL; pilus (MSHA type) biogenesis protein MshL 610128 5080598 Sputcn32_0560 Shewanella putrefaciens CN-32 pilus (MSHA type) biogenesis protein MshL YP_001182091.1 608452 D 319224 CDS YP_001182092.1 146291668 5080599 610135..611061 1 NC_009438.1 KEGG: she:Shewmr4_3485 MSHA biogenesis protein MshM; MSHA biogenesis protein MshM 611061 5080599 Sputcn32_0561 Shewanella putrefaciens CN-32 MSHA biogenesis protein MshM YP_001182092.1 610135 D 319224 CDS YP_001182093.1 146291669 5080600 611058..612248 1 NC_009438.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO4110 MSHA biogenesis protein MshN, putative; hypothetical protein 612248 5080600 Sputcn32_0562 Shewanella putrefaciens CN-32 hypothetical protein YP_001182093.1 611058 D 319224 CDS YP_001182094.1 146291670 5080601 612245..614005 1 NC_009438.1 PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: shm:Shewmr7_0469 type II secretion system protein E; type II secretion system protein E 614005 5080601 Sputcn32_0563 Shewanella putrefaciens CN-32 type II secretion system protein E YP_001182094.1 612245 D 319224 CDS YP_001182095.1 146291671 5080602 614008..615228 1 NC_009438.1 PFAM: type II secretion system protein; KEGG: son:SO4108 MSHA biogenesis protein MshG; type II secretion system protein 615228 5080602 Sputcn32_0564 Shewanella putrefaciens CN-32 type II secretion system protein YP_001182095.1 614008 D 319224 CDS YP_001182096.1 146291672 5080603 615272..615766 1 NC_009438.1 KEGG: son:SO4107 hypothetical protein; hypothetical protein 615766 5080603 Sputcn32_0565 Shewanella putrefaciens CN-32 hypothetical protein YP_001182096.1 615272 D 319224 CDS YP_001182097.1 146291673 5080604 615843..616460 1 NC_009438.1 KEGG: son:SO4106 MSHA pilin protein MshB; MSHA pilin protein MshB 616460 5080604 Sputcn32_0566 Shewanella putrefaciens CN-32 MSHA pilin protein MshB YP_001182097.1 615843 D 319224 CDS YP_001182098.1 146291674 5080605 616512..617021 1 NC_009438.1 KEGG: she:Shewmr4_3479 methylation site containing protein; methylation site containing protein 617021 5080605 Sputcn32_0567 Shewanella putrefaciens CN-32 methylation site containing protein YP_001182098.1 616512 D 319224 CDS YP_001182099.1 146291675 5080606 617035..617544 1 NC_009438.1 KEGG: she:Shewmr4_3478 methylation site containing protein; methylation site containing protein 617544 5080606 Sputcn32_0568 Shewanella putrefaciens CN-32 methylation site containing protein YP_001182099.1 617035 D 319224 CDS YP_001182100.1 146291676 5080607 617752..618240 1 NC_009438.1 KEGG: son:SO4104 MSHA pilin protein MshC; MSHA pilin protein MshC 618240 5080607 Sputcn32_0569 Shewanella putrefaciens CN-32 MSHA pilin protein MshC YP_001182100.1 617752 D 319224 CDS YP_001182101.1 146291677 5080608 618230..618778 1 NC_009438.1 KEGG: shm:Shewmr7_0475 methylation site containing protein; methylation site containing protein 618778 5080608 Sputcn32_0570 Shewanella putrefaciens CN-32 methylation site containing protein YP_001182101.1 618230 D 319224 CDS YP_001182102.1 146291678 5080609 618778..619623 1 NC_009438.1 KEGG: son:SO4102 MSHA biogenesis protein MshO; MSHA biogenesis protein MshO 619623 5080609 Sputcn32_0571 Shewanella putrefaciens CN-32 MSHA biogenesis protein MshO YP_001182102.1 618778 D 319224 CDS YP_001182103.1 146291679 5080610 619658..620101 1 NC_009438.1 KEGG: shm:Shewmr7_0477 MSHA biogenesis protein MshP; MSHA biogenesis protein MshP 620101 5080610 Sputcn32_0572 Shewanella putrefaciens CN-32 MSHA biogenesis protein MshP YP_001182103.1 619658 D 319224 CDS YP_001182104.1 146291680 5080611 620094..623870 1 NC_009438.1 KEGG: shm:Shewmr7_0478 MSHA biogenesis protein MshQ; MSHA biogenesis protein MshQ 623870 5080611 Sputcn32_0573 Shewanella putrefaciens CN-32 MSHA biogenesis protein MshQ YP_001182104.1 620094 D 319224 CDS YP_001182105.1 146291681 5080612 624214..625263 1 NC_009438.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 625263 5080612 Sputcn32_0574 Shewanella putrefaciens CN-32 rod shape-determining protein MreB YP_001182105.1 624214 D 319224 CDS YP_001182106.1 146291682 5080613 625307..626311 1 NC_009438.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 626311 5080613 Sputcn32_0575 Shewanella putrefaciens CN-32 rod shape-determining protein MreC YP_001182106.1 625307 D 319224 CDS YP_001182107.1 146291683 5080614 626311..626799 1 NC_009438.1 PFAM: Rod shape-determining protein MreD; KEGG: son:SO4096 rod shape-determining protein MreD; rod shape-determining protein MreD 626799 5080614 Sputcn32_0576 Shewanella putrefaciens CN-32 rod shape-determining protein MreD YP_001182107.1 626311 D 319224 CDS YP_001182108.1 146291684 5080615 626802..627398 1 NC_009438.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: shm:Shewmr7_0482 maf protein; maf protein 627398 5080615 Sputcn32_0577 Shewanella putrefaciens CN-32 maf protein YP_001182108.1 626802 D 319224 CDS YP_001182109.1 146291685 5080616 627580..629088 1 NC_009438.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 629088 5080616 Sputcn32_0578 Shewanella putrefaciens CN-32 ribonuclease G YP_001182109.1 627580 D 319224 CDS YP_001182110.1 146291686 5080617 629088..633239 1 NC_009438.1 KEGG: she:Shewmr4_3467 hypothetical protein; hypothetical protein 633239 5080617 Sputcn32_0579 Shewanella putrefaciens CN-32 hypothetical protein YP_001182110.1 629088 D 319224 CDS YP_001182111.1 146291687 5080618 633163..633993 1 NC_009438.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: son:SO4092 hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 633993 5080618 Sputcn32_0580 Shewanella putrefaciens CN-32 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001182111.1 633163 D 319224 CDS YP_001182112.1 146291688 5080619 634127..635575 1 NC_009438.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: son:SO4091 TldD protein; C69 family peptidase 635575 5080619 Sputcn32_0581 Shewanella putrefaciens CN-32 C69 family peptidase YP_001182112.1 634127 D 319224 CDS YP_001182113.1 146291689 5080620 635694..637088 1 NC_009438.1 PFAM: outer membrane efflux protein; KEGG: shm:Shewmr7_0487 outer membrane efflux protein; outer membrane efflux protein 637088 5080620 Sputcn32_0582 Shewanella putrefaciens CN-32 outer membrane efflux protein YP_001182113.1 635694 D 319224 CDS YP_001182114.1 146291690 5080621 637078..638052 1 NC_009438.1 PFAM: secretion protein HlyD family protein; KEGG: son:SO4089 HlyD family secretion protein; secretion protein HlyD family protein 638052 5080621 Sputcn32_0583 Shewanella putrefaciens CN-32 secretion protein HlyD family protein YP_001182114.1 637078 D 319224 CDS YP_001182115.1 146291691 5080622 638121..639347 1 NC_009438.1 PFAM: ABC-2 type transporter; KEGG: son:SO4088 conserved hypothetical protein; ABC transporter 639347 5080622 Sputcn32_0584 Shewanella putrefaciens CN-32 ABC transporter YP_001182115.1 638121 D 319224 CDS YP_001182116.1 146291692 5080623 639349..640497 1 NC_009438.1 PFAM: ABC-2 type transporter; KEGG: she:Shewmr4_3461 ABC-2 type transporter; ABC transporter 640497 5080623 Sputcn32_0585 Shewanella putrefaciens CN-32 ABC transporter YP_001182116.1 639349 D 319224 CDS YP_001182117.1 146291693 5080624 640729..641616 1 NC_009438.1 PFAM: Ion transport protein; KEGG: sde:Sde_1761 cold shock protein; Ion transport protein 641616 5080624 Sputcn32_0586 Shewanella putrefaciens CN-32 Ion transport protein YP_001182117.1 640729 D 319224 CDS YP_001182118.1 146291694 5080625 642040..643371 1 NC_009438.1 PFAM: amino acid permease-associated region; KEGG: she:Shewmr4_3458 amino acid permease-associated region; amino acid permease-associated protein 643371 5080625 Sputcn32_0587 Shewanella putrefaciens CN-32 amino acid permease-associated protein YP_001182118.1 642040 D 319224 CDS YP_001182119.1 146291695 5080626 complement(643572..644642) 1 NC_009438.1 KEGG: pfo:Pfl_3517 hypothetical protein; hypothetical protein 644642 5080626 Sputcn32_0588 Shewanella putrefaciens CN-32 hypothetical protein YP_001182119.1 643572 R 319224 CDS YP_001182120.1 146291696 5080627 complement(644791..645411) 1 NC_009438.1 KEGG: bam:Bamb_5633 hypothetical protein; hypothetical protein 645411 5080627 Sputcn32_0589 Shewanella putrefaciens CN-32 hypothetical protein YP_001182120.1 644791 R 319224 CDS YP_001182121.1 146291697 5080628 complement(645496..647880) 1 NC_009438.1 PFAM: Catalase domain protein; KEGG: nmu:Nmul_A1515 catalase; catalase 647880 5080628 Sputcn32_0590 Shewanella putrefaciens CN-32 catalase YP_001182121.1 645496 R 319224 CDS YP_001182122.1 146291698 5080629 648173..648640 1 NC_009438.1 PFAM: MgtC/SapB transporter; KEGG: pcr:Pcryo_2508 MgtC/SapB transporter; MgtC/SapB transporter 648640 5080629 Sputcn32_0591 Shewanella putrefaciens CN-32 MgtC/SapB transporter YP_001182122.1 648173 D 319224 CDS YP_001182123.1 146291699 5080630 complement(648789..651311) 1 NC_009438.1 PFAM: Ig domain protein, group 1 domain protein; KEGG: shm:Shewmr7_0493 Ig domain protein, group 1 domain protein; Ig domain-containing protein 651311 5080630 Sputcn32_0592 Shewanella putrefaciens CN-32 Ig domain-containing protein YP_001182123.1 648789 R 319224 CDS YP_001182124.1 146291700 5080631 complement(651341..651877) 1 NC_009438.1 PFAM: protein of unknown function DUF615; KEGG: shm:Shewmr7_0494 protein of unknown function DUF615; hypothetical protein 651877 5080631 Sputcn32_0593 Shewanella putrefaciens CN-32 hypothetical protein YP_001182124.1 651341 R 319224 CDS YP_001182125.1 146291701 5080632 652064..653407 1 NC_009438.1 PFAM: peptidase U62, modulator of DNA gyrase; KEGG: she:Shewmr4_3455 peptidase U62, modulator of DNA gyrase; C69 family peptidase 653407 5080632 Sputcn32_0594 Shewanella putrefaciens CN-32 C69 family peptidase YP_001182125.1 652064 D 319224 CDS YP_001182126.1 146291702 5080633 complement(653587..655728) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4077 TonB-dependent receptor, putative; TonB-dependent receptor 655728 5080633 Sputcn32_0595 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001182126.1 653587 R 319224 CDS YP_001182127.1 146291703 5080634 complement(655894..656742) 1 NC_009438.1 KEGG: shm:Shewmr7_0497 hypothetical protein; hypothetical protein 656742 5080634 Sputcn32_0596 Shewanella putrefaciens CN-32 hypothetical protein YP_001182127.1 655894 R 319224 CDS YP_001182128.1 146291704 5080635 656981..657217 1 NC_009438.1 PFAM: protein of unknown function DUF331; KEGG: shm:Shewmr7_0498 protein of unknown function DUF331; hypothetical protein 657217 5080635 Sputcn32_0597 Shewanella putrefaciens CN-32 hypothetical protein YP_001182128.1 656981 D 319224 CDS YP_001182129.1 146291705 5080636 657426..658829 1 NC_009438.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: chu:CHU_3664 fumarate hydratase/aspartate ammonia-lyase; class II fumarate hydratase 658829 5080636 Sputcn32_0598 Shewanella putrefaciens CN-32 class II fumarate hydratase YP_001182129.1 657426 D 319224 CDS YP_001182130.1 146291706 5080637 complement(658973..660391) 1 NC_009438.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 660391 rimO 5080637 rimO Shewanella putrefaciens CN-32 30S ribosomal protein S12 methylthiotransferase YP_001182130.1 658973 R 319224 CDS YP_001182131.1 146291707 5080638 660773..661486 1 NC_009438.1 PFAM: protein of unknown function DUF541; KEGG: shm:Shewmr7_0500 protein of unknown function DUF541; hypothetical protein 661486 5080638 Sputcn32_0600 Shewanella putrefaciens CN-32 hypothetical protein YP_001182131.1 660773 D 319224 CDS YP_001182132.1 146291708 5080639 661690..662466 1 NC_009438.1 PFAM: EAL domain protein; KEGG: ilo:IL0500 Signalling protein containing EAL domain; diguanylate phosphodiesterase 662466 5080639 Sputcn32_0601 Shewanella putrefaciens CN-32 diguanylate phosphodiesterase YP_001182132.1 661690 D 319224 CDS YP_001182133.1 146291709 5080640 662607..663398 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_0501 methyltransferase type 11; type 11 methyltransferase 663398 5080640 Sputcn32_0602 Shewanella putrefaciens CN-32 type 11 methyltransferase YP_001182133.1 662607 D 319224 CDS YP_001182134.1 146291710 5080641 complement(663442..665592) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sfr:Sfri_3717 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 665592 5080641 Sputcn32_0603 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001182134.1 663442 R 319224 CDS YP_001182135.1 146291711 5080642 666155..666733 1 NC_009438.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: sfr:Sfri_0734 OmpA domain protein transmembrane region-containing protein; OmpA domain-containing protein 666733 5080642 Sputcn32_0604 Shewanella putrefaciens CN-32 OmpA domain-containing protein YP_001182135.1 666155 D 319224 CDS YP_001182136.1 146291712 5080643 667327..668202 1 NC_009438.1 PFAM: MORN variant repeat protein; KEGG: fnu:FN2119 hypothetical exported 24-amino acid repeat protein; MORN repeat-containing protein 668202 5080643 Sputcn32_0605 Shewanella putrefaciens CN-32 MORN repeat-containing protein YP_001182136.1 667327 D 319224 CDS YP_001182137.1 146291713 5080644 complement(668546..669523) 1 NC_009438.1 PFAM: protein of unknown function DUF1568; KEGG: son:SO1241 hypothetical protein; hypothetical protein 669523 5080644 Sputcn32_0606 Shewanella putrefaciens CN-32 hypothetical protein YP_001182137.1 668546 R 319224 CDS YP_001182138.1 146291714 5080645 669635..669937 1 NC_009438.1 PFAM: transposase Tn5, dimerisation domain protein; KEGG: plu:plu4494 transposase, IS4 family; transposase Tn5 dimerisation subunit 669937 5080645 Sputcn32_0607 Shewanella putrefaciens CN-32 transposase Tn5 dimerisation subunit YP_001182138.1 669635 D 319224 CDS YP_001182139.1 146291715 5080646 complement(670021..671124) 1 NC_009438.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 671124 5080646 Sputcn32_0608 Shewanella putrefaciens CN-32 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001182139.1 670021 R 319224 CDS YP_001182140.1 146291716 5080647 complement(671111..671527) 1 NC_009438.1 KEGG: shm:Shewmr7_0505 hypothetical protein; hypothetical protein 671527 5080647 Sputcn32_0609 Shewanella putrefaciens CN-32 hypothetical protein YP_001182140.1 671111 R 319224 CDS YP_001182141.1 146291717 5080400 671645..672262 1 NC_009438.1 KEGG: she:Shewmr4_3445 pentapeptide repeat protein; pentapeptide repeat-containing protein 672262 5080400 Sputcn32_0610 Shewanella putrefaciens CN-32 pentapeptide repeat-containing protein YP_001182141.1 671645 D 319224 CDS YP_001182142.1 146291718 5080402 674937..675503 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4061 polysulfide reductase, subunit B; 4Fe-4S ferredoxin 675503 5080402 Sputcn32_0612 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001182142.1 674937 D 319224 CDS YP_001182143.1 146291719 5080403 675506..676453 1 NC_009438.1 PFAM: Polysulphide reductase, NrfD; KEGG: son:SO4060 polysulfide reductase, subunit C; polysulfide reductase, NrfD 676453 5080403 Sputcn32_0613 Shewanella putrefaciens CN-32 polysulfide reductase, NrfD YP_001182143.1 675506 D 319224 CDS YP_001182144.1 146291720 5080404 complement(676559..677302) 1 NC_009438.1 PFAM: protein of unknown function DUF81; KEGG: son:SO4058 hypothetical protein; hypothetical protein 677302 5080404 Sputcn32_0614 Shewanella putrefaciens CN-32 hypothetical protein YP_001182144.1 676559 R 319224 CDS YP_001182145.1 146291721 5080405 complement(677445..677759) 1 NC_009438.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 677759 5080405 Sputcn32_0615 Shewanella putrefaciens CN-32 transcriptional repressor protein MetJ YP_001182145.1 677445 R 319224 CDS YP_001182146.1 146291722 5080406 677972..679135 1 NC_009438.1 KEGG: son:SO4056 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-succinylhomoserine (thiol)-lyase 679135 5080406 Sputcn32_0616 Shewanella putrefaciens CN-32 O-succinylhomoserine (thiol)-lyase YP_001182146.1 677972 D 319224 CDS YP_001182147.1 146291723 5080407 679147..681540 1 NC_009438.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 681540 metL 5080407 metL Shewanella putrefaciens CN-32 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_001182147.1 679147 D 319224 CDS YP_001182148.1 146291724 5080408 681777..682664 1 NC_009438.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 682664 metF 5080408 metF Shewanella putrefaciens CN-32 5,10-methylenetetrahydrofolate reductase YP_001182148.1 681777 D 319224 CDS YP_001182149.1 146291725 5080409 complement(682727..684631) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: son:SO4053 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 684631 5080409 Sputcn32_0619 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182149.1 682727 R 319224 CDS YP_001182150.1 146291726 5080410 684819..685325 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: she:Shewmr4_3435 transcriptional regulator, MarR family; MarR family transcriptional regulator 685325 5080410 Sputcn32_0620 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001182150.1 684819 D 319224 CDS YP_001182151.1 146291727 5080411 685334..686392 1 NC_009438.1 PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_0517 secretion protein HlyD family protein; secretion protein HlyD family protein 686392 5080411 Sputcn32_0621 Shewanella putrefaciens CN-32 secretion protein HlyD family protein YP_001182151.1 685334 D 319224 CDS YP_001182152.1 146291728 5080412 686560..687588 1 NC_009438.1 KEGG: she:Shewmr4_3433 hypothetical protein; hypothetical protein 687588 5080412 Sputcn32_0622 Shewanella putrefaciens CN-32 hypothetical protein YP_001182152.1 686560 D 319224 CDS YP_001182153.1 146291729 5080413 687731..688357 1 NC_009438.1 KEGG: shm:Shewmr7_0519 cytochrome c family protein; cytochrome c family protein 688357 5080413 Sputcn32_0623 Shewanella putrefaciens CN-32 cytochrome c family protein YP_001182153.1 687731 D 319224 CDS YP_001182154.1 146291730 5080414 688368..689435 1 NC_009438.1 PFAM: cytochrome c, class I; KEGG: son:SO4047 cytochrome c family protein; cytochrome c, class I 689435 5080414 Sputcn32_0624 Shewanella putrefaciens CN-32 cytochrome c, class I YP_001182154.1 688368 D 319224 CDS YP_001182155.1 146291731 5080416 691195..693183 1 NC_009438.1 KEGG: son:SO1428 outer membrane protein; outer membrane protein 693183 5080416 Sputcn32_0626 Shewanella putrefaciens CN-32 outer membrane protein YP_001182155.1 691195 D 319224 CDS YP_001182156.1 146291732 5080417 693203..695713 1 NC_009438.1 TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: son:SO1429 anaerobic dimethyl sulfoxide reductase, A subunit; anaerobic dimethyl sulfoxide reductase subunit A 695713 5080417 Sputcn32_0627 Shewanella putrefaciens CN-32 anaerobic dimethyl sulfoxide reductase subunit A YP_001182156.1 693203 D 319224 CDS YP_001182157.1 146291733 5080418 695727..696401 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO1430 anaerobic dimethyl sulfoxide reductase, B subunit; 4Fe-4S ferredoxin 696401 5080418 Sputcn32_0628 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001182157.1 695727 D 319224 CDS YP_001182158.1 146291734 5080419 696458..697123 1 NC_009438.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: son:SO1431 hypothetical protein; cytoplasmic chaperone TorD family protein 697123 5080419 Sputcn32_0629 Shewanella putrefaciens CN-32 cytoplasmic chaperone TorD family protein YP_001182158.1 696458 D 319224 CDS YP_001182159.1 146291735 5080420 697134..697601 1 NC_009438.1 KEGG: son:SO1432 hypothetical protein; hypothetical protein 697601 5080420 Sputcn32_0630 Shewanella putrefaciens CN-32 hypothetical protein YP_001182159.1 697134 D 319224 CDS YP_001182160.1 146291736 5080421 697828..698157 1 NC_009438.1 KEGG: son:SO4044 hypothetical protein; hypothetical protein 698157 5080421 Sputcn32_0631 Shewanella putrefaciens CN-32 hypothetical protein YP_001182160.1 697828 D 319224 CDS YP_001182161.1 146291737 5080422 complement(698197..699309) 1 NC_009438.1 TIGRFAM: TonB family protein; KEGG: son:SO4043 TonB domain protein; TonB family protein 699309 5080422 Sputcn32_0632 Shewanella putrefaciens CN-32 TonB family protein YP_001182161.1 698197 R 319224 CDS YP_001182162.1 146291738 5080423 complement(699489..700295) 1 NC_009438.1 KEGG: son:SO4042 hydratase/decarboxylase family protein; hydratase/decarboxylase family protein 700295 5080423 Sputcn32_0633 Shewanella putrefaciens CN-32 hydratase/decarboxylase family protein YP_001182162.1 699489 R 319224 CDS YP_001182163.1 146291739 5080424 700568..701587 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO4040 integral membrane domain protein; hypothetical protein 701587 5080424 Sputcn32_0634 Shewanella putrefaciens CN-32 hypothetical protein YP_001182163.1 700568 D 319224 CDS YP_001182164.1 146291740 5080425 701617..702231 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO4039 hydrolase, haloacid dehalogenase-like family; HAD family hydrolase 702231 5080425 Sputcn32_0635 Shewanella putrefaciens CN-32 HAD family hydrolase YP_001182164.1 701617 D 319224 CDS YP_001182165.1 146291741 5080426 complement(702228..702599) 1 NC_009438.1 KEGG: she:Shewmr4_3425 hypothetical protein; hypothetical protein 702599 5080426 Sputcn32_0636 Shewanella putrefaciens CN-32 hypothetical protein YP_001182165.1 702228 R 319224 CDS YP_001182166.1 146291742 5080427 complement(702738..704660) 1 NC_009438.1 PFAM: helicase domain protein; DbpA, RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: son:SO4034 ATP-dependent RNA helicase DeaD; DEAD/DEAH box helicase 704660 5080427 Sputcn32_0637 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001182166.1 702738 R 319224 CDS YP_001182167.1 146291743 5080428 complement(704965..707841) 1 NC_009438.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: son:SO4030 excinuclease ABC, A subunit; excinuclease ABC subunit A 707841 5080428 Sputcn32_0638 Shewanella putrefaciens CN-32 excinuclease ABC subunit A YP_001182167.1 704965 R 319224 CDS YP_001182168.1 146291744 5080429 708241..709608 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: son:SO4029 transporter, putative; major facilitator superfamily transporter 709608 5080429 Sputcn32_0639 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001182168.1 708241 D 319224 CDS YP_001182169.1 146291745 5080430 709716..710426 1 NC_009438.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: son:SO4028 single-strand binding protein; single-strand binding protein 710426 5080430 Sputcn32_0640 Shewanella putrefaciens CN-32 single-strand binding protein YP_001182169.1 709716 D 319224 CDS YP_001182170.1 146291746 5080431 710545..711123 1 NC_009438.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: she:Shewmr4_0607 glutamine amidotransferase of anthranilate synthase; glutamine amidotransferase of anthranilate synthase 711123 5080431 Sputcn32_0641 Shewanella putrefaciens CN-32 glutamine amidotransferase of anthranilate synthase YP_001182170.1 710545 D 319224 CDS YP_001182171.1 146291747 5080432 711290..713770 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: shm:Shewmr7_3422 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 713770 5080432 Sputcn32_0642 Shewanella putrefaciens CN-32 peptidase S9 prolyl oligopeptidase YP_001182171.1 711290 D 319224 CDS YP_001182172.1 146291748 5080433 713958..715103 1 NC_009438.1 PFAM: HDOD; KEGG: she:Shewmr4_0609 putative signal transduction protein; putative signal transduction protein 715103 5080433 Sputcn32_0643 Shewanella putrefaciens CN-32 putative signal transduction protein YP_001182172.1 713958 D 319224 CDS YP_001182173.1 146291749 5080434 715151..716062 1 NC_009438.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: shm:Shewmr7_3420 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 716062 5080434 Sputcn32_0644 Shewanella putrefaciens CN-32 alpha/beta hydrolase domain-containing protein YP_001182173.1 715151 D 319224 CDS YP_001182174.1 146291750 5080435 716371..717588 1 NC_009438.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 717588 argD 5080435 argD Shewanella putrefaciens CN-32 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_001182174.1 716371 D 319224 CDS YP_001182175.1 146291751 5080436 717715..718734 1 NC_009438.1 PFAM: arginine N-succinyltransferase beta subunit; KEGG: shm:Shewmr7_3418 arginine N-succinyltransferase; arginine N-succinyltransferase 718734 5080436 Sputcn32_0646 Shewanella putrefaciens CN-32 arginine N-succinyltransferase YP_001182175.1 717715 D 319224 CDS YP_001182176.1 146291752 5080437 718745..720205 1 NC_009438.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; succinylglutamic semialdehyde dehydrogenase 720205 astD 5080437 astD Shewanella putrefaciens CN-32 succinylglutamic semialdehyde dehydrogenase YP_001182176.1 718745 D 319224 CDS YP_001182177.1 146291753 5080438 720401..721204 1 NC_009438.1 KEGG: she:Shewmr4_0614 hypothetical protein; hypothetical protein 721204 5080438 Sputcn32_0648 Shewanella putrefaciens CN-32 hypothetical protein YP_001182177.1 720401 D 319224 CDS YP_001182178.1 146291754 5080439 complement(721289..722617) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: shm:Shewmr7_3415 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 722617 5080439 Sputcn32_0649 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001182178.1 721289 R 319224 CDS YP_001182179.1 146291755 5080440 complement(722614..723288) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shm:Shewmr7_3414 two component transcriptional regulator, winged helix family; two component transcriptional regulator 723288 5080440 Sputcn32_0650 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001182179.1 722614 R 319224 CDS YP_001182180.1 146291756 5080441 complement(723269..723616) 1 NC_009438.1 KEGG: shm:Shewmr7_3413 hypothetical protein; hypothetical protein 723616 5080441 Sputcn32_0651 Shewanella putrefaciens CN-32 hypothetical protein YP_001182180.1 723269 R 319224 CDS YP_001182181.1 146291757 5080442 complement(723699..724334) 1 NC_009438.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 724334 5080442 Sputcn32_0652 Shewanella putrefaciens CN-32 cAMP-regulatory protein YP_001182181.1 723699 R 319224 CDS YP_001182182.1 146291758 5080443 724757..725536 1 NC_009438.1 KEGG: son:SO0625 hypothetical protein; hypothetical protein 725536 5080443 Sputcn32_0653 Shewanella putrefaciens CN-32 hypothetical protein YP_001182182.1 724757 D 319224 CDS YP_001182183.1 146291759 5080444 725815..728022 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: son:SO0628 GGDEF domain protein; diguanylate cyclase/phosphodiesterase 728022 5080444 Sputcn32_0654 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001182183.1 725815 D 319224 CDS YP_001182184.1 146291760 5080445 728080..730620 1 NC_009438.1 KEGG: shm:Shewmr7_3407 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; Helicase ATP-dependent, C-terminal domain protein; SMART: DEAD-like helicases-like; ATP-dependent helicase HrpB 730620 5080445 Sputcn32_0655 Shewanella putrefaciens CN-32 ATP-dependent helicase HrpB YP_001182184.1 728080 D 319224 CDS YP_001182185.1 146291761 5080446 730663..733002 1 NC_009438.1 KEGG: she:Shewmr4_0624 penicillin-binding protein 1B; TIGRFAM: penicillin-binding protein 1B; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; penicillin-binding protein 1B 733002 5080446 Sputcn32_0656 Shewanella putrefaciens CN-32 penicillin-binding protein 1B YP_001182185.1 730663 D 319224 CDS YP_001182186.1 146291762 5080447 733153..733431 1 NC_009438.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: son:SO0635 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 733431 5080447 Sputcn32_0657 Shewanella putrefaciens CN-32 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001182186.1 733153 D 319224 CDS YP_001182187.1 146291763 5080448 733511..733906 1 NC_009438.1 KEGG: shm:Shewmr7_3401 hypothetical protein; hypothetical protein 733906 5080448 Sputcn32_0658 Shewanella putrefaciens CN-32 hypothetical protein YP_001182187.1 733511 D 319224 CDS YP_001182188.1 146291764 5080449 734051..734281 1 NC_009438.1 KEGG: son:SO4012 hypothetical protein; hypothetical protein 734281 5080449 Sputcn32_0659 Shewanella putrefaciens CN-32 hypothetical protein YP_001182188.1 734051 D 319224 CDS YP_001182189.1 146291765 5082068 734481..735182 1 NC_009438.1 KEGG: son:SO4011 hypothetical protein; hypothetical protein 735182 5082068 Sputcn32_0660 Shewanella putrefaciens CN-32 hypothetical protein YP_001182189.1 734481 D 319224 CDS YP_001182190.1 146291766 5082069 complement(735271..736578) 1 NC_009438.1 KEGG: she:Shewmr4_0632 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer 736578 5082069 Sputcn32_0661 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182190.1 735271 R 319224 CDS YP_001182191.1 146291767 5082070 complement(736897..740004) 1 NC_009438.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: she:Shewmr4_0633 molydopterin dinucleotide-binding region; molybdopterin oxidoreductase 740004 5082070 Sputcn32_0662 Shewanella putrefaciens CN-32 molybdopterin oxidoreductase YP_001182191.1 736897 R 319224 CDS YP_001182192.1 146291768 5082071 complement(740040..741122) 1 NC_009438.1 PFAM: Polysulphide reductase, NrfD; KEGG: she:Shewmr4_0634 polysulphide reductase, NrfD; polysulfide reductase, NrfD 741122 5082071 Sputcn32_0663 Shewanella putrefaciens CN-32 polysulfide reductase, NrfD YP_001182192.1 740040 R 319224 CDS YP_001182193.1 146291769 5082072 complement(741112..741894) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: she:Shewmr4_0635 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 741894 5082072 Sputcn32_0664 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001182193.1 741112 R 319224 CDS YP_001182194.1 146291770 5082073 742175..744187 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: she:Shewmr4_0636 periplasmic sensor signal transduction histidine kinase; histidine kinase 744187 5082073 Sputcn32_0665 Shewanella putrefaciens CN-32 histidine kinase YP_001182194.1 742175 D 319224 CDS YP_001182195.1 146291771 5082074 744187..744798 1 NC_009438.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: she:Shewmr4_0637 two component transcriptional regulator, LuxR family; response regulator receiver protein 744798 5082074 Sputcn32_0666 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001182195.1 744187 D 319224 CDS YP_001182196.1 146291772 5082075 745115..748786 1 NC_009438.1 KEGG: she:Shewmr4_0638 hypothetical protein; hypothetical protein 748786 5082075 Sputcn32_0667 Shewanella putrefaciens CN-32 hypothetical protein YP_001182196.1 745115 D 319224 CDS YP_001182197.1 146291773 5082076 748899..749552 1 NC_009438.1 KEGG: shm:Shewmr7_3381 hypothetical protein; hypothetical protein 749552 5082076 Sputcn32_0668 Shewanella putrefaciens CN-32 hypothetical protein YP_001182197.1 748899 D 319224 CDS YP_001182198.1 146291774 5082077 749601..750821 1 NC_009438.1 KEGG: shm:Shewmr7_3380 hypothetical protein; hypothetical protein 750821 5082077 Sputcn32_0669 Shewanella putrefaciens CN-32 hypothetical protein YP_001182198.1 749601 D 319224 CDS YP_001182199.1 146291775 5082078 750809..751681 1 NC_009438.1 KEGG: son:SO4005 hypothetical protein; hypothetical protein 751681 5082078 Sputcn32_0670 Shewanella putrefaciens CN-32 hypothetical protein YP_001182199.1 750809 D 319224 CDS YP_001182200.1 146291776 5082079 752073..753317 1 NC_009438.1 PFAM: sodium:dicarboxylate symporter; KEGG: she:Shewmr4_0642 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 753317 5082079 Sputcn32_0671 Shewanella putrefaciens CN-32 sodium:dicarboxylate symporter YP_001182200.1 752073 D 319224 CDS YP_001182201.1 146291777 5082080 753633..755339 1 NC_009438.1 PFAM: chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: pha:PSHAa2387 chemotaxis sensory protein; methyl-accepting chemotaxis sensory transducer 755339 5082080 Sputcn32_0672 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182201.1 753633 D 319224 CDS YP_001182202.1 146291778 5082081 complement(755675..756163) 1 NC_009438.1 PFAM: Uncharacterized protein UPF0114; KEGG: son:SO3997 hypothetical protein; hypothetical protein 756163 5082081 Sputcn32_0673 Shewanella putrefaciens CN-32 hypothetical protein YP_001182202.1 755675 R 319224 CDS YP_001182203.1 146291779 5082082 756443..756790 1 NC_009438.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: nmu:Nmul_A1193 transport-associated; transport-associated 756790 5082082 Sputcn32_0674 Shewanella putrefaciens CN-32 transport-associated YP_001182203.1 756443 D 319224 CDS YP_001182204.1 146291780 5082083 complement(757789..758778) 1 NC_009438.1 PFAM: NERD domain protein; KEGG: she:Shewmr4_0648 NERD domain protein; NERD domain-containing protein 758778 5082083 Sputcn32_0675 Shewanella putrefaciens CN-32 NERD domain-containing protein YP_001182204.1 757789 R 319224 CDS YP_001182205.1 146291781 5082084 complement(759468..760460) 1 NC_009438.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 760460 5082084 Sputcn32_0676 Shewanella putrefaciens CN-32 fructose-1,6-bisphosphatase YP_001182205.1 759468 R 319224 CDS YP_001182206.1 146291782 5082085 760765..763047 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9B, dipeptidylpeptidase IV domain protein; KEGG: shm:Shewmr7_3372 peptidase S9B, dipeptidylpeptidase IV domain protein; peptidase S9B dipeptidylpeptidase IV subunit 763047 5082085 Sputcn32_0677 Shewanella putrefaciens CN-32 peptidase S9B dipeptidylpeptidase IV subunit YP_001182206.1 760765 D 319224 CDS YP_001182207.1 146291783 5082086 complement(763112..763828) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shm:Shewmr7_3371 two component transcriptional regulator, winged helix family; two-component response regulator 763828 5082086 Sputcn32_0678 Shewanella putrefaciens CN-32 two-component response regulator YP_001182207.1 763112 R 319224 CDS YP_001182208.1 146291784 5082087 764412..764846 1 NC_009438.1 KEGG: son:SO3987 hypothetical protein; hypothetical protein 764846 5082087 Sputcn32_0679 Shewanella putrefaciens CN-32 hypothetical protein YP_001182208.1 764412 D 319224 CDS YP_001182209.1 146291785 5082088 765270..766625 1 NC_009438.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase III 766625 5082088 Sputcn32_0680 Shewanella putrefaciens CN-32 aspartate kinase III YP_001182209.1 765270 D 319224 CDS YP_001182210.1 146291786 5082089 complement(766705..767697) 1 NC_009438.1 PFAM: Mg2+ transporter protein, CorA family protein; KEGG: shm:Shewmr7_3367 Mg2 transporter protein, CorA family protein; Mg2+ transporter protein, CorA family protein 767697 5082089 Sputcn32_0681 Shewanella putrefaciens CN-32 Mg2+ transporter protein, CorA family protein YP_001182210.1 766705 R 319224 CDS YP_001182211.1 146291787 5082090 767861..768235 1 NC_009438.1 PFAM: Uncharacterized conserved protein UCP006287; KEGG: she:Shewmr4_0656 uncharacterized conserved protein UCP006287; hypothetical protein 768235 5082090 Sputcn32_0682 Shewanella putrefaciens CN-32 hypothetical protein YP_001182211.1 767861 D 319224 CDS YP_001182212.1 146291788 5082091 complement(768324..768953) 1 NC_009438.1 PFAM: regulatory protein, LuxR; response regulator receiver; KEGG: shm:Shewmr7_3365 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 768953 5082091 Sputcn32_0683 Shewanella putrefaciens CN-32 two component LuxR family transcriptional regulator YP_001182212.1 768324 R 319224 CDS YP_001182213.1 146291789 5082092 complement(768946..770748) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase, dimerisation and phosphoacceptor region; KEGG: shm:Shewmr7_3364 signal transduction histidine kinase, nitrate/nitrite-specific, NarQ; nitrate/nitrite sensor protein NarQ 770748 5082092 Sputcn32_0684 Shewanella putrefaciens CN-32 nitrate/nitrite sensor protein NarQ YP_001182213.1 768946 R 319224 CDS YP_001182214.1 146291790 5082093 770990..772393 1 NC_009438.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 772393 nrfA 5082093 nrfA Shewanella putrefaciens CN-32 cytochrome c552 YP_001182214.1 770990 D 319224 CDS YP_001182215.1 146291791 5082094 772579..774057 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: she:Shewmr4_3377 ABC transporter related; ABC transporter-like protein 774057 5082094 Sputcn32_0686 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182215.1 772579 D 319224 CDS YP_001182216.1 146291792 5082095 774345..774641 1 NC_009438.1 PFAM: protein of unknown function DUF134; Sigma-70, region 4 type 2; KEGG: son:SO0727 hypothetical protein; hypothetical protein 774641 5082095 Sputcn32_0687 Shewanella putrefaciens CN-32 hypothetical protein YP_001182216.1 774345 D 319224 CDS YP_001182217.1 146291793 5082096 774638..775150 1 NC_009438.1 KEGG: son:SO0728 hypothetical protein; hypothetical protein 775150 5082096 Sputcn32_0688 Shewanella putrefaciens CN-32 hypothetical protein YP_001182217.1 774638 D 319224 CDS YP_001182218.1 146291794 5082097 complement(775169..775534) 1 NC_009438.1 KEGG: she:Shewmr4_3375 thioredoxin domain; thioredoxin domain-containing protein 775534 5082097 Sputcn32_0689 Shewanella putrefaciens CN-32 thioredoxin domain-containing protein YP_001182218.1 775169 R 319224 CDS YP_001182219.1 146291795 5082098 775871..776269 1 NC_009438.1 PFAM: transcriptional regulator PadR family protein; KEGG: son:SO0734 hypothetical protein; PadR-like family transcriptional regulator 776269 5082098 Sputcn32_0690 Shewanella putrefaciens CN-32 PadR-like family transcriptional regulator YP_001182219.1 775871 D 319224 CDS YP_001182220.1 146291796 5082099 776271..777209 1 NC_009438.1 KEGG: son:SO0735 hypothetical protein; hypothetical protein 777209 5082099 Sputcn32_0691 Shewanella putrefaciens CN-32 hypothetical protein YP_001182220.1 776271 D 319224 CDS YP_001182221.1 146291797 5082100 777433..779469 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO0737 TonB-dependent receptor, putative; TonB-dependent receptor 779469 5082100 Sputcn32_0692 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001182221.1 777433 D 319224 CDS YP_001182222.1 146291798 5082101 779641..780471 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: shm:Shewmr7_0586 transcriptional regulator, AraC family; AraC family transcriptional regulator 780471 5082101 Sputcn32_0693 Shewanella putrefaciens CN-32 AraC family transcriptional regulator YP_001182222.1 779641 D 319224 CDS YP_001182223.1 146291799 5082102 780581..781264 1 NC_009438.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: she:Shewmr4_3366 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 781264 5082102 Sputcn32_0694 Shewanella putrefaciens CN-32 lysine exporter protein LysE/YggA YP_001182223.1 780581 D 319224 CDS YP_001182224.1 146291800 5082103 781334..782179 1 NC_009438.1 KEGG: son:SO0764 hypothetical protein; hypothetical protein 782179 5082103 Sputcn32_0695 Shewanella putrefaciens CN-32 hypothetical protein YP_001182224.1 781334 D 319224 CDS YP_001182225.1 146291801 5082104 complement(782287..785370) 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_0550 acriflavin resistance protein; acriflavin resistance protein 785370 5082104 Sputcn32_0696 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001182225.1 782287 R 319224 CDS YP_001182226.1 146291802 5082105 complement(785374..786453) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_0551 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 786453 5082105 Sputcn32_0697 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001182226.1 785374 R 319224 CDS YP_001182227.1 146291803 5082106 786580..787569 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO0701 transcriptional regulator, LysR family; LysR family transcriptional regulator 787569 5082106 Sputcn32_0698 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001182227.1 786580 D 319224 CDS YP_001182228.1 146291804 5082107 complement(787572..788942) 1 NC_009438.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO0702 MATE efflux family protein; MATE efflux family protein 788942 5082107 Sputcn32_0699 Shewanella putrefaciens CN-32 MATE efflux family protein YP_001182228.1 787572 R 319224 CDS YP_001182229.1 146291805 5082108 789168..789458 1 NC_009438.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 789458 groES 5082108 groES Shewanella putrefaciens CN-32 co-chaperonin GroES YP_001182229.1 789168 D 319224 CDS YP_001182230.1 146291806 5082109 789516..791153 1 NC_009438.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 791153 groEL 5082109 groEL Shewanella putrefaciens CN-32 chaperonin GroEL YP_001182230.1 789516 D 319224 CDS YP_001182231.1 146291807 5082110 791324..791572 1 NC_009438.1 hypothetical protein 791572 5082110 Sputcn32_0702 Shewanella putrefaciens CN-32 hypothetical protein YP_001182231.1 791324 D 319224 CDS YP_001182232.1 146291808 5082111 complement(791844..794150) 1 NC_009438.1 hypothetical protein 794150 5082111 Sputcn32_0703 Shewanella putrefaciens CN-32 hypothetical protein YP_001182232.1 791844 R 319224 CDS YP_001182233.1 146291809 5082112 complement(794232..795038) 1 NC_009438.1 PFAM: protein of unknown function DUF88; KEGG: sfr:Sfri_3658 protein of unknown function DUF88; hypothetical protein 795038 5082112 Sputcn32_0704 Shewanella putrefaciens CN-32 hypothetical protein YP_001182233.1 794232 R 319224 CDS YP_001182234.1 146291810 5082113 complement(795726..796274) 1 NC_009438.1 KEGG: shm:Shewmr7_3360 hypothetical protein; hypothetical protein 796274 5082113 Sputcn32_0705 Shewanella putrefaciens CN-32 hypothetical protein YP_001182234.1 795726 R 319224 CDS YP_001182235.1 146291811 5082114 796632..797489 1 NC_009438.1 PFAM: protein of unknown function RIO1; KEGG: shm:Shewmr7_3358 protein of unknown function RIO1; hypothetical protein 797489 5082114 Sputcn32_0706 Shewanella putrefaciens CN-32 hypothetical protein YP_001182235.1 796632 D 319224 CDS YP_001182236.1 146291812 5082115 complement(798332..798565) 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: shm:Shewmr7_3357 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 798565 5082115 Sputcn32_0707 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001182236.1 798332 R 319224 CDS YP_001182237.1 146291813 5082116 799204..799890 1 NC_009438.1 PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: she:Shewmr4_0666 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 799890 5082116 Sputcn32_0708 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001182237.1 799204 D 319224 CDS YP_001182238.1 146291814 5082117 800125..800949 1 NC_009438.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; KEGG: she:Shewmr4_0667 molybdenum ABC transporter, periplasmic molybdate-binding protein; molybdate ABC transporter substrate-binding protein 800949 5082117 Sputcn32_0709 Shewanella putrefaciens CN-32 molybdate ABC transporter substrate-binding protein YP_001182238.1 800125 D 319224 CDS YP_001182239.1 146291815 5082018 complement(801062..802426) 1 NC_009438.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: son:SO3966 magnesium transporter; magnesium transporter 802426 5082018 Sputcn32_0710 Shewanella putrefaciens CN-32 magnesium transporter YP_001182239.1 801062 R 319224 CDS YP_001182240.1 146291816 5082019 complement(802639..802914) 1 NC_009438.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: she:Shewmr4_0669 phosphocarrier, HPr family; phosphotransferase system, phosphocarrier protein HPr 802914 5082019 Sputcn32_0711 Shewanella putrefaciens CN-32 phosphotransferase system, phosphocarrier protein HPr YP_001182240.1 802639 R 319224 CDS YP_001182241.1 146291817 5082020 complement(802901..803755) 1 NC_009438.1 PFAM: Uncharacterized P-loop ATPase protein UPF0042; KEGG: shm:Shewmr7_3352 uncharacterized P-loop ATPase protein UPF0042; hypothetical protein 803755 5082020 Sputcn32_0712 Shewanella putrefaciens CN-32 hypothetical protein YP_001182241.1 802901 R 319224 CDS YP_001182242.1 146291818 5082021 complement(803752..804195) 1 NC_009438.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: shm:Shewmr7_3351 PTS IIA-like nitrogen-regulatory protein PtsN; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 804195 5082021 Sputcn32_0713 Shewanella putrefaciens CN-32 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_001182242.1 803752 R 319224 CDS YP_001182243.1 146291819 5082022 complement(804198..804485) 1 NC_009438.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: shm:Shewmr7_3350 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 804485 5082022 Sputcn32_0714 Shewanella putrefaciens CN-32 sigma 54 modulation protein/ribosomal protein S30EA YP_001182243.1 804198 R 319224 CDS YP_001182244.1 146291820 5082023 complement(804514..805989) 1 NC_009438.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 805989 5082023 Sputcn32_0715 Shewanella putrefaciens CN-32 RNA polymerase factor sigma-54 YP_001182244.1 804514 R 319224 CDS YP_001182245.1 146291821 5082024 complement(806093..806824) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3348 ABC transporter related; ABC transporter-like protein 806824 5082024 Sputcn32_0716 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182245.1 806093 R 319224 CDS YP_001182246.1 146291822 5082025 complement(806821..807375) 1 NC_009438.1 PFAM: OstA family protein; KEGG: shm:Shewmr7_3347 OstA family protein; OstA family protein 807375 5082025 Sputcn32_0717 Shewanella putrefaciens CN-32 OstA family protein YP_001182246.1 806821 R 319224 CDS YP_001182247.1 146291823 5082026 complement(807362..807922) 1 NC_009438.1 PFAM: protein of unknown function DUF1239; KEGG: son:SO3958 hypothetical protein; hypothetical protein 807922 5082026 Sputcn32_0718 Shewanella putrefaciens CN-32 hypothetical protein YP_001182247.1 807362 R 319224 CDS YP_001182248.1 146291824 5082027 complement(807919..808470) 1 NC_009438.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 808470 5082027 Sputcn32_0719 Shewanella putrefaciens CN-32 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_001182248.1 807919 R 319224 CDS YP_001182249.1 146291825 5082028 complement(808470..809447) 1 NC_009438.1 KEGG: shm:Shewmr7_3344 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS); KpsF/GutQ family protein 809447 5082028 Sputcn32_0720 Shewanella putrefaciens CN-32 KpsF/GutQ family protein YP_001182249.1 808470 R 319224 CDS YP_001182250.1 146291826 5082029 810101..810919 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3343 ABC transporter related; ABC transporter-like protein 810919 5082029 Sputcn32_0721 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182250.1 810101 D 319224 CDS YP_001182251.1 146291827 5082030 810916..811701 1 NC_009438.1 PFAM: protein of unknown function DUF140; KEGG: son:SO3953 putative membrane protein; hypothetical protein 811701 5082030 Sputcn32_0722 Shewanella putrefaciens CN-32 hypothetical protein YP_001182251.1 810916 D 319224 CDS YP_001182252.1 146291828 5082031 811758..812231 1 NC_009438.1 PFAM: Mammalian cell entry related domain protein; KEGG: son:SO3952 mce-related protein; hypothetical protein 812231 5082031 Sputcn32_0723 Shewanella putrefaciens CN-32 hypothetical protein YP_001182252.1 811758 D 319224 CDS YP_001182253.1 146291829 5082032 812243..812908 1 NC_009438.1 PFAM: toluene tolerance family protein; KEGG: shm:Shewmr7_3340 toluene tolerance family protein; toluene tolerance family protein 812908 5082032 Sputcn32_0724 Shewanella putrefaciens CN-32 toluene tolerance family protein YP_001182253.1 812243 D 319224 CDS YP_001182254.1 146291830 5082033 812905..813189 1 NC_009438.1 KEGG: son:SO3950 SpoIIAA family protein; SpoIIAA family protein 813189 5082033 Sputcn32_0725 Shewanella putrefaciens CN-32 SpoIIAA family protein YP_001182254.1 812905 D 319224 CDS YP_001182255.1 146291831 5082034 813209..813466 1 NC_009438.1 PFAM: BolA family protein; KEGG: shm:Shewmr7_3338 BolA family protein; BolA family protein 813466 5082034 Sputcn32_0726 Shewanella putrefaciens CN-32 BolA family protein YP_001182255.1 813209 D 319224 CDS YP_001182256.1 146291832 5082035 813476..814735 1 NC_009438.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 814735 5082035 Sputcn32_0727 Shewanella putrefaciens CN-32 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001182256.1 813476 D 319224 CDS YP_001182257.1 146291833 5082036 815165..816169 1 NC_009438.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: ilo:IL0163 2OG-Fe(II) oxygenase superfamily protein; 2OG-Fe(II) oxygenase 816169 5082036 Sputcn32_0728 Shewanella putrefaciens CN-32 2OG-Fe(II) oxygenase YP_001182257.1 815165 D 319224 CDS YP_001182258.1 146291834 5082037 816188..817348 1 NC_009438.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; KEGG: dge:Dgeo_0011 methionine gamma-lyase; methionine gamma-lyase 817348 5082037 Sputcn32_0729 Shewanella putrefaciens CN-32 methionine gamma-lyase YP_001182258.1 816188 D 319224 CDS YP_001182259.1 146291835 5082038 complement(817447..818511) 1 NC_009438.1 KEGG: son:SO4655 sulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 818511 5082038 Sputcn32_0730 Shewanella putrefaciens CN-32 sulfate ABC transporter ATPase YP_001182259.1 817447 R 319224 CDS YP_001182260.1 146291836 5082039 complement(818539..819390) 1 NC_009438.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4654 sulfate ABC transporter, permease protein; sulfate ABC transporter permease 819390 5082039 Sputcn32_0731 Shewanella putrefaciens CN-32 sulfate ABC transporter permease YP_001182260.1 818539 R 319224 CDS YP_001182261.1 146291837 5082040 complement(819395..820219) 1 NC_009438.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO4653 sulfate ABC transporter, permease protein; sulfate ABC transporter permease 820219 5082040 Sputcn32_0732 Shewanella putrefaciens CN-32 sulfate ABC transporter permease YP_001182261.1 819395 R 319224 CDS YP_001182262.1 146291838 5082041 complement(820288..821301) 1 NC_009438.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO4652 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter substrate-binding protein 821301 5082041 Sputcn32_0733 Shewanella putrefaciens CN-32 sulfate ABC transporter substrate-binding protein YP_001182262.1 820288 R 319224 CDS YP_001182263.1 146291839 5082042 complement(821390..821563) 1 NC_009438.1 KEGG: son:SO4651 hypothetical protein; hypothetical protein 821563 5082042 Sputcn32_0734 Shewanella putrefaciens CN-32 hypothetical protein YP_001182263.1 821390 R 319224 CDS YP_001182264.1 146291840 5082043 complement(821633..822283) 1 NC_009438.1 PFAM: protein of unknown function DUF1234; KEGG: son:SO4650 hypothetical protein; hypothetical protein 822283 5082043 Sputcn32_0735 Shewanella putrefaciens CN-32 hypothetical protein YP_001182264.1 821633 R 319224 CDS YP_001182265.1 146291841 5082044 822794..823099 1 NC_009438.1 hypothetical protein 823099 5082044 Sputcn32_0736 Shewanella putrefaciens CN-32 hypothetical protein YP_001182265.1 822794 D 319224 CDS YP_001182266.1 146291842 5082045 823099..824541 1 NC_009438.1 PFAM: Radical SAM domain protein; KEGG: vpa:VPA0442 hypothetical protein; radical SAM domain-containing protein 824541 5082045 Sputcn32_0737 Shewanella putrefaciens CN-32 radical SAM domain-containing protein YP_001182266.1 823099 D 319224 CDS YP_001182267.1 146291843 5082046 complement(824545..825378) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vch:VCA0791 transposase OrfAB, subunit B; integrase catalytic subunit 825378 5082046 Sputcn32_0738 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001182267.1 824545 R 319224 CDS YP_001182268.1 146291844 5082047 complement(825417..825728) 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vch:VCA0792 transposase OrfAB, subunit A; transposase IS3/IS911 family protein 825728 5082047 Sputcn32_0739 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001182268.1 825417 R 319224 CDS YP_001182269.1 146291845 5082048 825842..827044 1 NC_009438.1 PFAM: Radical SAM domain protein; KEGG: vpa:VPA0443 hypothetical protein; radical SAM domain-containing protein 827044 5082048 Sputcn32_0740 Shewanella putrefaciens CN-32 radical SAM domain-containing protein YP_001182269.1 825842 D 319224 CDS YP_001182270.1 146291846 5082049 complement(827850..828932) 1 NC_009438.1 TIGRFAM: periplasmic serine protease DegS; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: son:SO3943 protease DegS; periplasmic serine protease DegS 828932 5082049 Sputcn32_0741 Shewanella putrefaciens CN-32 periplasmic serine protease DegS YP_001182270.1 827850 R 319224 CDS YP_001182271.1 146291847 5082050 complement(829060..830415) 1 NC_009438.1 TIGRFAM: protease Do; PFAM: peptidase S1 and S6, chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: she:Shewmr4_3271 protease Do; protease Do 830415 5082050 Sputcn32_0742 Shewanella putrefaciens CN-32 protease Do YP_001182271.1 829060 R 319224 CDS YP_001182272.1 146291848 5082051 830834..831946 1 NC_009438.1 PFAM: AFG1-family ATPase; KEGG: she:Shewmr4_3270 AFG1-family ATPase; AFG1 family ATPase 831946 5082051 Sputcn32_0743 Shewanella putrefaciens CN-32 AFG1 family ATPase YP_001182272.1 830834 D 319224 CDS YP_001182273.1 146291849 5082052 832235..832663 1 NC_009438.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 832663 rplM 5082052 rplM Shewanella putrefaciens CN-32 50S ribosomal protein L13 YP_001182273.1 832235 D 319224 CDS YP_001182274.1 146291850 5082053 832678..833070 1 NC_009438.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 833070 rpsI 5082053 rpsI Shewanella putrefaciens CN-32 30S ribosomal protein S9 YP_001182274.1 832678 D 319224 CDS YP_001182275.1 146291851 5082054 833164..833364 1 NC_009438.1 KEGG: shm:Shewmr7_0680 hypothetical protein; hypothetical protein 833364 5082054 Sputcn32_0746 Shewanella putrefaciens CN-32 hypothetical protein YP_001182275.1 833164 D 319224 CDS YP_001182276.1 146291852 5082055 833431..834726 1 NC_009438.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 834726 5082055 Sputcn32_0747 Shewanella putrefaciens CN-32 adenylosuccinate synthetase YP_001182276.1 833431 D 319224 CDS YP_001182277.1 146291853 5082056 834836..835492 1 NC_009438.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: shm:Shewmr7_0682 Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein 835492 5082056 Sputcn32_0748 Shewanella putrefaciens CN-32 Sel1 domain-containing protein YP_001182277.1 834836 D 319224 CDS YP_001182278.1 146291854 5082057 835532..837955 1 NC_009438.1 KEGG: shm:Shewmr7_0683 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonucleases; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B, OB region N-terminal domain; Ribonuclease R winged-helix domain protein; SMART: Cold shock protein; ribonuclease R 837955 5082057 Sputcn32_0749 Shewanella putrefaciens CN-32 ribonuclease R YP_001182278.1 835532 D 319224 CDS YP_001182279.1 146291855 5082058 837956..838696 1 NC_009438.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 838696 5082058 Sputcn32_0750 Shewanella putrefaciens CN-32 23S rRNA (guanosine-2'-O-)-methyltransferase YP_001182279.1 837956 D 319224 CDS YP_001182280.1 146291856 5082059 complement(838761..840206) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_3262 major facilitator superfamily MFS_1; major facilitator superfamily transporter 840206 5082059 Sputcn32_0751 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001182280.1 838761 R 319224 CDS YP_001182281.1 146291857 5082060 complement(840527..841270) 1 NC_009438.1 PFAM: protein of unknown function DUF481; KEGG: she:Shewmr4_3261 protein of unknown function DUF481; hypothetical protein 841270 5082060 Sputcn32_0752 Shewanella putrefaciens CN-32 hypothetical protein YP_001182281.1 840527 R 319224 CDS YP_001182282.1 146291858 5082061 841484..841879 1 NC_009438.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 841879 rpsF 5082061 rpsF Shewanella putrefaciens CN-32 30S ribosomal protein S6 YP_001182282.1 841484 D 319224 CDS YP_001182283.1 146291859 5082062 841888..842193 1 NC_009438.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 842193 5082062 Sputcn32_0754 Shewanella putrefaciens CN-32 primosomal replication protein N YP_001182283.1 841888 D 319224 CDS YP_001182284.1 146291860 5082063 842205..842432 1 NC_009438.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 842432 rpsR 5082063 rpsR Shewanella putrefaciens CN-32 30S ribosomal protein S18 YP_001182284.1 842205 D 319224 CDS YP_001182285.1 146291861 5082064 842469..842921 1 NC_009438.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 842921 rplI 5082064 rplI Shewanella putrefaciens CN-32 50S ribosomal protein L9 YP_001182285.1 842469 D 319224 CDS YP_001182286.1 146291862 5082065 complement(843162..845360) 1 NC_009438.1 KEGG: shm:Shewmr7_0691 hypothetical protein; hypothetical protein 845360 5082065 Sputcn32_0757 Shewanella putrefaciens CN-32 hypothetical protein YP_001182286.1 843162 R 319224 CDS YP_001182287.1 146291863 5082066 845479..846885 1 NC_009438.1 KEGG: son:SO3917 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase, N-terminal domain protein; DnaB domain protein helicase, C-terminal domain protein; SMART: AAA ATPase; replicative DNA helicase 846885 5082066 Sputcn32_0758 Shewanella putrefaciens CN-32 replicative DNA helicase YP_001182287.1 845479 D 319224 CDS YP_001182288.1 146291864 5082067 847028..848104 1 NC_009438.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 848104 alr 5082067 alr Shewanella putrefaciens CN-32 alanine racemase YP_001182288.1 847028 D 319224 CDS YP_001182289.1 146291865 5081969 complement(848178..848642) 1 NC_009438.1 KEGG: shm:Shewmr7_0696 putative chemotaxis protein CheX; putative chemotaxis protein CheX 848642 5081969 Sputcn32_0760 Shewanella putrefaciens CN-32 putative chemotaxis protein CheX YP_001182289.1 848178 R 319224 CDS YP_001182290.1 146291866 5081970 849155..850186 1 NC_009438.1 TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase, DuS; KEGG: she:Shewmr4_3243 TIM-barrel protein, YjbN family; tRNA-dihydrouridine synthase A 850186 5081970 Sputcn32_0761 Shewanella putrefaciens CN-32 tRNA-dihydrouridine synthase A YP_001182290.1 849155 D 319224 CDS YP_001182291.1 146291867 5081971 850384..850674 1 NC_009438.1 KEGG: shm:Shewmr7_0747 hypothetical protein; hypothetical protein 850674 5081971 Sputcn32_0762 Shewanella putrefaciens CN-32 hypothetical protein YP_001182291.1 850384 D 319224 CDS YP_001182292.1 146291868 5081972 850828..851028 1 NC_009438.1 KEGG: she:Shewmr4_3241 phage shock protein C, PspC; phage shock protein C, PspC 851028 5081972 Sputcn32_0763 Shewanella putrefaciens CN-32 phage shock protein C, PspC YP_001182292.1 850828 D 319224 CDS YP_001182293.1 146291869 5081973 complement(851141..851878) 1 NC_009438.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: shm:Shewmr7_0749 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 851878 5081973 Sputcn32_0764 Shewanella putrefaciens CN-32 enoyl-CoA hydratase/isomerase YP_001182293.1 851141 R 319224 CDS YP_001182294.1 146291870 5081974 851913..852398 1 NC_009438.1 PFAM: protein of unknown function DUF461; KEGG: son:SO3907 hypothetical protein; hypothetical protein 852398 5081974 Sputcn32_0765 Shewanella putrefaciens CN-32 hypothetical protein YP_001182294.1 851913 D 319224 CDS YP_001182295.1 146291871 5081975 852410..853378 1 NC_009438.1 KEGG: shm:Shewmr7_0751 hypothetical protein; hypothetical protein 853378 5081975 Sputcn32_0766 Shewanella putrefaciens CN-32 hypothetical protein YP_001182295.1 852410 D 319224 CDS YP_001182296.1 146291872 5081976 853423..854118 1 NC_009438.1 KEGG: she:Shewmr4_3237 hypothetical protein; hypothetical protein 854118 5081976 Sputcn32_0767 Shewanella putrefaciens CN-32 hypothetical protein YP_001182296.1 853423 D 319224 CDS YP_001182297.1 146291873 5081977 complement(854186..855493) 1 NC_009438.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 855493 tolC 5081977 tolC Shewanella putrefaciens CN-32 outer membrane channel protein YP_001182297.1 854186 R 319224 CDS YP_001182298.1 146291874 5081978 855737..856339 1 NC_009438.1 PFAM: NUDIX hydrolase; KEGG: son:SO3903 ADP-ribose pyrophosphatase; ADP-ribose diphosphatase 856339 5081978 Sputcn32_0769 Shewanella putrefaciens CN-32 ADP-ribose diphosphatase YP_001182298.1 855737 D 319224 CDS YP_001182299.1 146291875 5081979 856352..856792 1 NC_009438.1 PFAM: protein of unknown function DUF1249; KEGG: son:SO3902 hypothetical protein; hypothetical protein 856792 5081979 Sputcn32_0770 Shewanella putrefaciens CN-32 hypothetical protein YP_001182299.1 856352 D 319224 CDS YP_001182300.1 146291876 5081980 856809..857648 1 NC_009438.1 PFAM: metallophosphoesterase; Calcineurin phosphoesterase C-terminal domain protein; KEGG: she:Shewmr4_3233 calcineurin phosphoesterase C-terminal domain protein; calcineurin phosphoesterase C-terminal domain-containing protein 857648 5081980 Sputcn32_0771 Shewanella putrefaciens CN-32 calcineurin phosphoesterase C-terminal domain-containing protein YP_001182300.1 856809 D 319224 CDS YP_001182301.1 146291877 5081981 857675..858250 1 NC_009438.1 PFAM: protein of unknown function UPF0227; KEGG: she:Shewmr4_3232 protein of unknown function UPF0227; hypothetical protein 858250 5081981 Sputcn32_0772 Shewanella putrefaciens CN-32 hypothetical protein YP_001182301.1 857675 D 319224 CDS YP_001182302.1 146291878 5081982 858307..860193 1 NC_009438.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 860193 5081982 Sputcn32_0773 Shewanella putrefaciens CN-32 DNA topoisomerase IV subunit B YP_001182302.1 858307 D 319224 CDS YP_001182303.1 146291879 5081983 860246..861421 1 NC_009438.1 KEGG: shm:Shewmr7_0759 L-sorbosone dehydrogenase, putative; L-sorbosone dehydrogenase 861421 5081983 Sputcn32_0774 Shewanella putrefaciens CN-32 L-sorbosone dehydrogenase YP_001182303.1 860246 D 319224 CDS YP_001182304.1 146291880 5081984 861414..863690 1 NC_009438.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 863690 5081984 Sputcn32_0775 Shewanella putrefaciens CN-32 DNA topoisomerase IV subunit A YP_001182304.1 861414 D 319224 CDS YP_001182305.1 146291881 5081986 complement(864127..865707) 1 NC_009438.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: chemotaxis sensory transducer; Hemerythrin HHE cation binding domain protein; KEGG: son:SO3890 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 865707 5081986 Sputcn32_0776 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182305.1 864127 R 319224 CDS YP_001182306.1 146291882 5081987 866011..866142 1 NC_009438.1 KEGG: sfr:Sfri_0507 hypothetical protein; hypothetical protein 866142 5081987 Sputcn32_0777 Shewanella putrefaciens CN-32 hypothetical protein YP_001182306.1 866011 D 319224 CDS YP_001182307.1 146291883 5081988 complement(866259..866870) 1 NC_009438.1 KEGG: she:Shewmr4_3224 hypothetical protein; hypothetical protein 866870 5081988 Sputcn32_0778 Shewanella putrefaciens CN-32 hypothetical protein YP_001182307.1 866259 R 319224 CDS YP_001182308.1 146291884 5081989 867040..868686 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3894 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 868686 5081989 Sputcn32_0779 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001182308.1 867040 D 319224 CDS YP_001182309.1 146291885 5081990 complement(868704..869516) 1 NC_009438.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: she:Shewmr4_3226 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 869516 5081990 Sputcn32_0780 Shewanella putrefaciens CN-32 UBA/THIF-type NAD/FAD binding protein YP_001182309.1 868704 R 319224 CDS YP_001182310.1 146291886 5081991 870454..871515 1 NC_009438.1 PFAM: porin, Gram-negative type; KEGG: shm:Shewmr7_0761 porin, gram-negative type; porin 871515 5081991 Sputcn32_0781 Shewanella putrefaciens CN-32 porin YP_001182310.1 870454 D 319224 CDS YP_001182311.1 146291887 5081992 complement(871620..872822) 1 NC_009438.1 TIGRFAM: putative iron-sulfur cluster binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: shm:Shewmr7_0771 putative iron-sulfur cluster binding protein; putative iron-sulfur cluster binding protein 872822 5081992 Sputcn32_0782 Shewanella putrefaciens CN-32 putative iron-sulfur cluster binding protein YP_001182311.1 871620 R 319224 CDS YP_001182312.1 146291888 5081993 873052..873486 1 NC_009438.1 KEGG: son:SO3856 hypothetical protein; hypothetical protein 873486 5081993 Sputcn32_0783 Shewanella putrefaciens CN-32 hypothetical protein YP_001182312.1 873052 D 319224 CDS YP_001182313.1 146291889 5081994 complement(873652..875340) 1 NC_009438.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 875340 5081994 Sputcn32_0784 Shewanella putrefaciens CN-32 malate dehydrogenase YP_001182313.1 873652 R 319224 CDS YP_001182314.1 146291890 5081995 complement(875609..876079) 1 NC_009438.1 PFAM: protein of unknown function DUF1456; KEGG: shm:Shewmr7_0779 protein of unknown function DUF1456; hypothetical protein 876079 5081995 Sputcn32_0785 Shewanella putrefaciens CN-32 hypothetical protein YP_001182314.1 875609 R 319224 CDS YP_001182315.1 146291891 5081996 complement(876223..877497) 1 NC_009438.1 KEGG: she:Shewmr4_3186 putative manganese transporter; putative manganese transporter 877497 5081996 Sputcn32_0786 Shewanella putrefaciens CN-32 putative manganese transporter YP_001182315.1 876223 R 319224 CDS YP_001182316.1 146291892 5081997 complement(877556..878086) 1 NC_009438.1 PFAM: membrane-flanked domain; KEGG: son:SO3849 hypothetical protein; membrane-flanked domain-containing protein 878086 5081997 Sputcn32_0787 Shewanella putrefaciens CN-32 membrane-flanked domain-containing protein YP_001182316.1 877556 R 319224 CDS YP_001182317.1 146291893 5081998 complement(878593..879093) 1 NC_009438.1 KEGG: shm:Shewmr7_0784 hypothetical protein; hypothetical protein 879093 5081998 Sputcn32_0788 Shewanella putrefaciens CN-32 hypothetical protein YP_001182317.1 878593 R 319224 CDS YP_001182318.1 146291894 5081999 complement(879124..879531) 1 NC_009438.1 KEGG: she:Shewmr4_3181 hypothetical protein; hypothetical protein 879531 5081999 Sputcn32_0789 Shewanella putrefaciens CN-32 hypothetical protein YP_001182318.1 879124 R 319224 CDS YP_001182319.1 146291895 5082000 complement(879687..880472) 1 NC_009438.1 KEGG: she:Shewmr4_3180 hypothetical protein; hypothetical protein 880472 5082000 Sputcn32_0790 Shewanella putrefaciens CN-32 hypothetical protein YP_001182319.1 879687 R 319224 CDS YP_001182320.1 146291896 5082001 complement(880692..882776) 1 NC_009438.1 PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: she:Shewmr4_3179 endothelin-converting enzyme 1; endothelin-converting protein 1 882776 5082001 Sputcn32_0791 Shewanella putrefaciens CN-32 endothelin-converting protein 1 YP_001182320.1 880692 R 319224 CDS YP_001182321.1 146291897 5082002 883169..883858 1 NC_009438.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: shm:Shewmr7_0788 pseudouridine synthase, Rsu; pseudouridine synthase 883858 5082002 Sputcn32_0792 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001182321.1 883169 D 319224 CDS YP_001182322.1 146291898 5082003 complement(883933..884889) 1 NC_009438.1 KEGG: she:Shewmr4_3177 hypothetical protein; hypothetical protein 884889 5082003 Sputcn32_0793 Shewanella putrefaciens CN-32 hypothetical protein YP_001182322.1 883933 R 319224 CDS YP_001182323.1 146291899 5082004 complement(884886..885461) 1 NC_009438.1 KEGG: she:Shewmr4_3176 hypothetical protein; hypothetical protein 885461 5082004 Sputcn32_0794 Shewanella putrefaciens CN-32 hypothetical protein YP_001182323.1 884886 R 319224 CDS YP_001182324.1 146291900 5082005 complement(885461..885994) 1 NC_009438.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO3840 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 885994 5082005 Sputcn32_0795 Shewanella putrefaciens CN-32 ECF subfamily RNA polymerase sigma-24 factor YP_001182324.1 885461 R 319224 CDS YP_001182325.1 146291901 5082006 886409..888271 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_0792 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 888271 5082006 Sputcn32_0796 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182325.1 886409 D 319224 CDS YP_001182326.1 146291902 5082007 complement(888334..889281) 1 NC_009438.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 889281 5082007 Sputcn32_0797 Shewanella putrefaciens CN-32 ribose-phosphate pyrophosphokinase YP_001182326.1 888334 R 319224 CDS YP_001182327.1 146291903 5082008 complement(889392..890246) 1 NC_009438.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 890246 ipk 5082008 ipk Shewanella putrefaciens CN-32 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001182327.1 889392 R 319224 CDS YP_001182328.1 146291904 5082009 complement(890248..890892) 1 NC_009438.1 PFAM: outer membrane lipoprotein LolB; KEGG: son:SO3835 outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 890892 5082009 Sputcn32_0799 Shewanella putrefaciens CN-32 outer membrane lipoprotein LolB YP_001182328.1 890248 R 319224 CDS YP_001182329.1 146291905 5082010 891145..892395 1 NC_009438.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 892395 hemA 5082010 hemA Shewanella putrefaciens CN-32 glutamyl-tRNA reductase YP_001182329.1 891145 D 319224 CDS YP_001182330.1 146291906 5082011 892410..893501 1 NC_009438.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 893501 prfA 5082011 prfA Shewanella putrefaciens CN-32 peptide chain release factor 1 YP_001182330.1 892410 D 319224 CDS YP_001182331.1 146291907 5082012 893504..894352 1 NC_009438.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: she:Shewmr4_3168 modification methylase, HemK family; HemK family modification methylase 894352 5082012 Sputcn32_0802 Shewanella putrefaciens CN-32 HemK family modification methylase YP_001182331.1 893504 D 319224 CDS YP_001182332.1 146291908 5082013 894746..895189 1 NC_009438.1 KEGG: cgb:cg1190 hypothetical protein; hypothetical protein 895189 5082013 Sputcn32_0803 Shewanella putrefaciens CN-32 hypothetical protein YP_001182332.1 894746 D 319224 CDS YP_001182333.1 146291909 5082014 895244..895573 1 NC_009438.1 hypothetical protein 895573 5082014 Sputcn32_0804 Shewanella putrefaciens CN-32 hypothetical protein YP_001182333.1 895244 D 319224 CDS YP_001182334.1 146291910 5082015 complement(895827..896246) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_0799 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 896246 5082015 Sputcn32_0805 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182334.1 895827 R 319224 CDS YP_001182335.1 146291911 5082016 896360..896755 1 NC_009438.1 PFAM: Invasion gene expression up-regulator, SirB; KEGG: shm:Shewmr7_0800 invasion gene expression up-regulator, SirB; invasion gene expression up-regulator, SirB 896755 5082016 Sputcn32_0806 Shewanella putrefaciens CN-32 invasion gene expression up-regulator, SirB YP_001182335.1 896360 D 319224 CDS YP_001182336.1 146291912 5082017 896755..897543 1 NC_009438.1 KEGG: shm:Shewmr7_0801 hypothetical protein; hypothetical protein 897543 5082017 Sputcn32_0807 Shewanella putrefaciens CN-32 hypothetical protein YP_001182336.1 896755 D 319224 CDS YP_001182337.1 146291913 5081919 897705..898952 1 NC_009438.1 PFAM: protein of unknown function DUF819; KEGG: shm:Shewmr7_0802 protein of unknown function DUF819; hypothetical protein 898952 5081919 Sputcn32_0808 Shewanella putrefaciens CN-32 hypothetical protein YP_001182337.1 897705 D 319224 CDS YP_001182338.1 146291914 5081920 899008..899856 1 NC_009438.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 899856 5081920 Sputcn32_0809 Shewanella putrefaciens CN-32 2-dehydro-3-deoxyphosphooctonate aldolase YP_001182338.1 899008 D 319224 CDS YP_001182339.1 146291915 5081921 complement(900070..901839) 1 NC_009438.1 TIGRFAM: flavocytochrome c; PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfr:Sfri_2586 flavocytochrome c; flavocytochrome c 901839 5081921 Sputcn32_0810 Shewanella putrefaciens CN-32 flavocytochrome c YP_001182339.1 900070 R 319224 CDS YP_001182340.1 146291916 5081922 902064..903092 1 NC_009438.1 KEGG: she:Shewmr4_3227 outer membrane porin, putative; outer membrane porin 903092 5081922 Sputcn32_0811 Shewanella putrefaciens CN-32 outer membrane porin YP_001182340.1 902064 D 319224 CDS YP_001182341.1 146291917 5081923 903216..904112 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sfr:Sfri_2588 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 904112 5081923 Sputcn32_0812 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001182341.1 903216 D 319224 CDS YP_001182342.1 146291918 5081924 904135..905361 1 NC_009438.1 PFAM: protein of unknown function DUF819; KEGG: sfr:Sfri_2589 protein of unknown function DUF819; hypothetical protein 905361 5081924 Sputcn32_0813 Shewanella putrefaciens CN-32 hypothetical protein YP_001182342.1 904135 D 319224 CDS YP_001182343.1 146291919 5081925 905477..907021 1 NC_009438.1 PFAM: EAL domain protein; KEGG: son:SO3821 rtn protein; EAL domain-containing protein 907021 5081925 Sputcn32_0814 Shewanella putrefaciens CN-32 EAL domain-containing protein YP_001182343.1 905477 D 319224 CDS YP_001182344.1 146291920 5081926 complement(907056..907466) 1 NC_009438.1 PFAM: nitrogen regulatory protein P-II; KEGG: shm:Shewmr7_0808 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 907466 5081926 Sputcn32_0815 Shewanella putrefaciens CN-32 nitrogen regulatory protein P-II YP_001182344.1 907056 R 319224 CDS YP_001182345.1 146291921 5081927 complement(907578..908540) 1 NC_009438.1 KEGG: she:Shewmr4_3158 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal domain protein; Ketopantoate reductase ApbA/PanE, C-terminal domain protein; 2-dehydropantoate 2-reductase 908540 5081927 Sputcn32_0816 Shewanella putrefaciens CN-32 2-dehydropantoate 2-reductase YP_001182345.1 907578 R 319224 CDS YP_001182346.1 146291922 5081928 complement(908585..908944) 1 NC_009438.1 PFAM: VanZ family protein; KEGG: she:Shewmr4_3157 VanZ family protein; VanZ family protein 908944 5081928 Sputcn32_0817 Shewanella putrefaciens CN-32 VanZ family protein YP_001182346.1 908585 R 319224 CDS YP_001182347.1 146291923 5081929 909108..909593 1 NC_009438.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 909593 5081929 Sputcn32_0818 Shewanella putrefaciens CN-32 putative nucleotide-binding protein YP_001182347.1 909108 D 319224 CDS YP_001182348.1 146291924 5081930 complement(909701..911116) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3814 AmpG protein, putative; major facilitator superfamily transporter 911116 5081930 Sputcn32_0819 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001182348.1 909701 R 319224 CDS YP_001182349.1 146291925 5081931 complement(911309..911629) 1 NC_009438.1 KEGG: shm:Shewmr7_0813 hypothetical protein; hypothetical protein 911629 5081931 Sputcn32_0820 Shewanella putrefaciens CN-32 hypothetical protein YP_001182349.1 911309 R 319224 CDS YP_001182350.1 146291926 5081932 complement(911697..912281) 1 NC_009438.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: shm:Shewmr7_0814 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 912281 5081932 Sputcn32_0821 Shewanella putrefaciens CN-32 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001182350.1 911697 R 319224 CDS YP_001182351.1 146291927 5081933 complement(912312..912878) 1 NC_009438.1 PFAM: Uncharacterized lipoprotein; KEGG: shm:Shewmr7_0815 uncharacterized lipoprotein; hypothetical protein 912878 5081933 Sputcn32_0822 Shewanella putrefaciens CN-32 hypothetical protein YP_001182351.1 912312 R 319224 CDS YP_001182352.1 146291928 5081934 913296..913871 1 NC_009438.1 PFAM: OmpA domain protein transmembrane region-containing protein; KEGG: son:SO3810 OmpA-like transmembrane domain protein; OmpA domain-containing protein 913871 5081934 Sputcn32_0823 Shewanella putrefaciens CN-32 OmpA domain-containing protein YP_001182352.1 913296 D 319224 CDS YP_001182353.1 146291929 5081935 914094..915125 1 NC_009438.1 KEGG: she:Shewmr4_3150 hypothetical protein; hypothetical protein 915125 5081935 Sputcn32_0824 Shewanella putrefaciens CN-32 hypothetical protein YP_001182353.1 914094 D 319224 CDS YP_001182354.1 146291930 5081936 915260..916123 1 NC_009438.1 KEGG: shm:Shewmr7_0818 sterol desaturase family protein; sterol desaturase family protein 916123 5081936 Sputcn32_0825 Shewanella putrefaciens CN-32 sterol desaturase family protein YP_001182354.1 915260 D 319224 CDS YP_001182355.1 146291931 5081937 916272..916907 1 NC_009438.1 KEGG: she:Shewmr4_3148 hypothetical protein; hypothetical protein 916907 5081937 Sputcn32_0826 Shewanella putrefaciens CN-32 hypothetical protein YP_001182355.1 916272 D 319224 CDS YP_001182356.1 146291932 5081938 917076..918470 1 NC_009438.1 TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; KEGG: shm:Shewmr7_0820 UDP-N-acetylmuramate; UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 918470 5081938 Sputcn32_0827 Shewanella putrefaciens CN-32 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_001182356.1 917076 D 319224 CDS YP_001182357.1 146291933 5081939 918472..919131 1 NC_009438.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: shm:Shewmr7_0821 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; aromatic acid decarboxylase 919131 5081939 Sputcn32_0828 Shewanella putrefaciens CN-32 aromatic acid decarboxylase YP_001182357.1 918472 D 319224 CDS YP_001182358.1 146291934 5081940 919139..919669 1 NC_009438.1 KEGG: shm:Shewmr7_0822 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 919669 5081940 Sputcn32_0829 Shewanella putrefaciens CN-32 hypoxanthine phosphoribosyltransferase YP_001182358.1 919139 D 319224 CDS YP_001182359.1 146291935 5081941 919807..920745 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO3802 ABC transporter, ATP-binding protein; ABC transporter-like protein 920745 5081941 Sputcn32_0830 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182359.1 919807 D 319224 CDS YP_001182360.1 146291936 5081942 920742..921512 1 NC_009438.1 PFAM: ABC-2 type transporter; KEGG: she:Shewmr4_3143 ABC-2 type transporter; ABC transporter 921512 5081942 Sputcn32_0831 Shewanella putrefaciens CN-32 ABC transporter YP_001182360.1 920742 D 319224 CDS YP_001182361.1 146291937 5081943 complement(921581..925459) 1 NC_009438.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; protease-associated PA domain protein; KEGG: son:SO1915 serine protease, subtilase family; peptidase S8/S53 subtilisin kexin sedolisin 925459 5081943 Sputcn32_0832 Shewanella putrefaciens CN-32 peptidase S8/S53 subtilisin kexin sedolisin YP_001182361.1 921581 R 319224 CDS YP_001182362.1 146291938 5081944 complement(925659..926153) 1 NC_009438.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 926153 5081944 Sputcn32_0833 Shewanella putrefaciens CN-32 DNA-binding transcriptional regulator AsnC YP_001182362.1 925659 R 319224 CDS YP_001182363.1 146291939 5081945 complement(926216..926896) 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: shm:Shewmr7_0827 pseudouridylate synthase; pseudouridylate synthase 926896 5081945 Sputcn32_0834 Shewanella putrefaciens CN-32 pseudouridylate synthase YP_001182363.1 926216 R 319224 CDS YP_001182364.1 146291940 5081946 927099..929015 1 NC_009438.1 PFAM: peptidase U32; KEGG: shm:Shewmr7_0828 peptidase U32; peptidase U32 929015 5081946 Sputcn32_0835 Shewanella putrefaciens CN-32 peptidase U32 YP_001182364.1 927099 D 319224 CDS YP_001182365.1 146291941 5081947 complement(929084..931324) 1 NC_009438.1 KEGG: shm:Shewmr7_0831 hypothetical protein; hypothetical protein 931324 5081947 Sputcn32_0836 Shewanella putrefaciens CN-32 hypothetical protein YP_001182365.1 929084 R 319224 CDS YP_001182366.1 146291942 5081948 931476..931793 1 NC_009438.1 PFAM: Cupin 2, conserved barrel domain protein; KEGG: shm:Shewmr7_0832 cupin 2, conserved barrel domain protein; cupin 931793 5081948 Sputcn32_0837 Shewanella putrefaciens CN-32 cupin YP_001182366.1 931476 D 319224 CDS YP_001182367.1 146291943 5081949 complement(931803..932969) 1 NC_009438.1 PFAM: peptidase M19, renal dipeptidase; KEGG: shm:Shewmr7_0834 twin-arginine translocation pathway signal; peptidase M19 932969 5081949 Sputcn32_0838 Shewanella putrefaciens CN-32 peptidase M19 YP_001182367.1 931803 R 319224 CDS YP_001182368.1 146291944 5081950 complement(933088..933534) 1 NC_009438.1 PFAM: Fe-S metabolism associated SufE; KEGG: she:Shewmr4_3132 Fe-S metabolism associated SufE; Fe-S metabolism associated SufE 933534 5081950 Sputcn32_0839 Shewanella putrefaciens CN-32 Fe-S metabolism associated SufE YP_001182368.1 933088 R 319224 CDS YP_001182369.1 146291945 5081951 complement(933609..934922) 1 NC_009438.1 TIGRFAM: cysteine desulfurases, SufS subfamily; PFAM: aminotransferase, class V; aminotransferase, class I and II; KEGG: son:SO3789 aminotransferase, class V; SufS subfamily cysteine desulfurase 934922 5081951 Sputcn32_0840 Shewanella putrefaciens CN-32 SufS subfamily cysteine desulfurase YP_001182369.1 933609 R 319224 CDS YP_001182370.1 146291946 5081953 935404..936249 1 NC_009438.1 PFAM: MltA-interacting MipA family protein; KEGG: sfr:Sfri_3064 MltA-interacting MipA family protein; MltA-interacting MipA family protein 936249 5081953 Sputcn32_0842 Shewanella putrefaciens CN-32 MltA-interacting MipA family protein YP_001182370.1 935404 D 319224 CDS YP_001182371.1 146291947 5081954 936259..936648 1 NC_009438.1 KEGG: sfr:Sfri_3063 hypothetical protein; hypothetical protein 936648 5081954 Sputcn32_0843 Shewanella putrefaciens CN-32 hypothetical protein YP_001182371.1 936259 D 319224 CDS YP_001182372.1 146291948 5081955 936650..937345 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: sdn:Sden_0557 response regulator receiver; two component transcriptional regulator 937345 5081955 Sputcn32_0844 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001182372.1 936650 D 319224 CDS YP_001182373.1 146291949 5081956 937351..938646 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: sdn:Sden_0558 ATP-binding region, ATPase-like protein; integral membrane sensor signal transduction histidine kinase 938646 5081956 Sputcn32_0845 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001182373.1 937351 D 319224 CDS YP_001182374.1 146291950 5081957 complement(938762..939220) 1 NC_009438.1 KEGG: sfr:Sfri_3059 hypothetical protein; hypothetical protein 939220 5081957 Sputcn32_0846 Shewanella putrefaciens CN-32 hypothetical protein YP_001182374.1 938762 R 319224 CDS YP_001182375.1 146291951 5081958 complement(939242..940015) 1 NC_009438.1 PFAM: MltA-interacting MipA family protein; KEGG: sfr:Sfri_3058 MltA-interacting MipA family protein; MltA-interacting MipA family protein 940015 5081958 Sputcn32_0847 Shewanella putrefaciens CN-32 MltA-interacting MipA family protein YP_001182375.1 939242 R 319224 CDS YP_001182376.1 146291952 5081959 complement(940249..941289) 1 NC_009438.1 PFAM: aldo/keto reductase; KEGG: shm:Shewmr7_3273 aldo/keto reductase; aldo/keto reductase 941289 5081959 Sputcn32_0848 Shewanella putrefaciens CN-32 aldo/keto reductase YP_001182376.1 940249 R 319224 CDS YP_001182377.1 146291953 5081960 941744..943114 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 943114 5081960 Sputcn32_0849 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit A YP_001182377.1 941744 D 319224 CDS YP_001182378.1 146291954 5081961 943114..944346 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 944346 5081961 Sputcn32_0850 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit B YP_001182378.1 943114 D 319224 CDS YP_001182379.1 146291955 5081962 944336..945130 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 945130 5081962 Sputcn32_0851 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit C YP_001182379.1 944336 D 319224 CDS YP_001182380.1 146291956 5081963 945127..945747 1 NC_009438.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 945747 5081963 Sputcn32_0852 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit D YP_001182380.1 945127 D 319224 CDS YP_001182381.1 146291957 5081964 945757..946365 1 NC_009438.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 946365 5081964 Sputcn32_0853 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit E YP_001182381.1 945757 D 319224 CDS YP_001182382.1 146291958 5081965 946443..947660 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 947660 5081965 Sputcn32_0854 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit F YP_001182382.1 946443 D 319224 CDS YP_001182383.1 146291959 5081966 complement(947779..948117) 1 NC_009438.1 PFAM: Ankyrin; KEGG: son:SO0908 hypothetical protein; ankyrin 948117 5081966 Sputcn32_0855 Shewanella putrefaciens CN-32 ankyrin YP_001182383.1 947779 R 319224 CDS YP_001182384.1 146291960 5081967 948535..949734 1 NC_009438.1 PFAM: beta-lactamase; KEGG: son:SO0914 hypothetical protein; beta-lactamase 949734 5081967 Sputcn32_0856 Shewanella putrefaciens CN-32 beta-lactamase YP_001182384.1 948535 D 319224 CDS YP_001182385.1 146291961 5081968 complement(949872..950309) 1 NC_009438.1 hypothetical protein 950309 5081968 Sputcn32_0857 Shewanella putrefaciens CN-32 hypothetical protein YP_001182385.1 949872 R 319224 CDS YP_001182386.1 146291962 5081869 complement(950728..951690) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein, MarR; KEGG: shm:Shewmr7_3265 transcriptional regulator, MarR family with acetyltransferase activity; MarR family transcriptional regulator 951690 5081869 Sputcn32_0858 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001182386.1 950728 R 319224 CDS YP_001182387.1 146291963 5081870 complement(951813..952367) 1 NC_009438.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 952367 5081870 Sputcn32_0859 Shewanella putrefaciens CN-32 NTPase YP_001182387.1 951813 R 319224 CDS YP_001182388.1 146291964 5081871 952626..955190 1 NC_009438.1 PFAM: peptidase S45, penicillin amidase; KEGG: shm:Shewmr7_3263 peptidase S45, penicillin amidase; peptidase S45, penicillin amidase 955190 5081871 Sputcn32_0860 Shewanella putrefaciens CN-32 peptidase S45, penicillin amidase YP_001182388.1 952626 D 319224 CDS YP_001182389.1 146291965 5081872 955657..956952 1 NC_009438.1 PFAM: aromatic amino acid permease; KEGG: son:SO0919 serine transporter, putative; aromatic amino acid permease 956952 5081872 Sputcn32_0861 Shewanella putrefaciens CN-32 aromatic amino acid permease YP_001182389.1 955657 D 319224 CDS YP_001182390.1 146291966 5081873 complement(957046..957489) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_3261 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 957489 5081873 Sputcn32_0862 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182390.1 957046 R 319224 CDS YP_001182391.1 146291967 5081874 957829..959160 1 NC_009438.1 PFAM: sodium:dicarboxylate symporter; KEGG: shm:Shewmr7_3259 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 959160 5081874 Sputcn32_0863 Shewanella putrefaciens CN-32 sodium:dicarboxylate symporter YP_001182391.1 957829 D 319224 CDS YP_001182392.1 146291968 5081875 complement(959260..959676) 1 NC_009438.1 PFAM: protein of unknown function DUF306, Meta and HslJ; KEGG: shm:Shewmr7_3258 protein of unknown function DUF306, MetA and HslJ; hypothetical protein 959676 5081875 Sputcn32_0864 Shewanella putrefaciens CN-32 hypothetical protein YP_001182392.1 959260 R 319224 CDS YP_001182393.1 146291969 5081876 959748..959972 1 NC_009438.1 KEGG: she:Shewmr4_0766 hypothetical protein; hypothetical protein 959972 5081876 Sputcn32_0865 Shewanella putrefaciens CN-32 hypothetical protein YP_001182393.1 959748 D 319224 CDS YP_001182394.1 146291970 5081877 960057..960629 1 NC_009438.1 KEGG: shm:Shewmr7_3255 acetyltransferase, GNAT family; acetyltransferase 960629 5081877 Sputcn32_0866 Shewanella putrefaciens CN-32 acetyltransferase YP_001182394.1 960057 D 319224 CDS YP_001182395.1 146291971 5081878 960696..961046 1 NC_009438.1 KEGG: shm:Shewmr7_3253 hypothetical protein; hypothetical protein 961046 5081878 Sputcn32_0867 Shewanella putrefaciens CN-32 hypothetical protein YP_001182395.1 960696 D 319224 CDS YP_001182396.1 146291972 5081879 complement(961201..962235) 1 NC_009438.1 PFAM: protein of unknown function DUF1568; KEGG: shm:Shewmr7_1178 protein of unknown function DUF1568; hypothetical protein 962235 5081879 Sputcn32_0868 Shewanella putrefaciens CN-32 hypothetical protein YP_001182396.1 961201 R 319224 CDS YP_001182397.1 146291973 5081880 962609..963199 1 NC_009438.1 KEGG: bfr:BF2853 hypothetical protein; hypothetical protein 963199 5081880 Sputcn32_0869 Shewanella putrefaciens CN-32 hypothetical protein YP_001182397.1 962609 D 319224 CDS YP_001182398.1 146291974 5081881 complement(964410..964895) 1 NC_009438.1 KEGG: shm:Shewmr7_3252 hypothetical protein; hypothetical protein 964895 5081881 Sputcn32_0870 Shewanella putrefaciens CN-32 hypothetical protein YP_001182398.1 964410 R 319224 CDS YP_001182399.1 146291975 5081882 complement(965027..966178) 1 NC_009438.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 966178 5081882 Sputcn32_0871 Shewanella putrefaciens CN-32 S-adenosylmethionine synthetase YP_001182399.1 965027 R 319224 CDS YP_001182400.1 146291976 5081883 966657..968651 1 NC_009438.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 968651 5081883 Sputcn32_0872 Shewanella putrefaciens CN-32 transketolase YP_001182400.1 966657 D 319224 CDS YP_001182401.1 146291977 5081884 968768..969784 1 NC_009438.1 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 969784 5081884 Sputcn32_0873 Shewanella putrefaciens CN-32 erythrose 4-phosphate dehydrogenase YP_001182401.1 968768 D 319224 CDS YP_001182402.1 146291978 5081885 969912..971087 1 NC_009438.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 971087 pgk 5081885 pgk Shewanella putrefaciens CN-32 phosphoglycerate kinase YP_001182402.1 969912 D 319224 CDS YP_001182403.1 146291979 5081886 971301..972368 1 NC_009438.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 972368 5081886 Sputcn32_0875 Shewanella putrefaciens CN-32 fructose-1,6-bisphosphate aldolase YP_001182403.1 971301 D 319224 CDS YP_001182404.1 146291980 5081887 972565..973302 1 NC_009438.1 PFAM: protein of unknown function DUF481; KEGG: shm:Shewmr7_3246 protein of unknown function DUF481; hypothetical protein 973302 5081887 Sputcn32_0876 Shewanella putrefaciens CN-32 hypothetical protein YP_001182404.1 972565 D 319224 CDS YP_001182405.1 146291981 5081888 973516..974952 1 NC_009438.1 KEGG: she:Shewmr4_0778 Na+/H+ antiporter; Na+/H+ antiporter 974952 5081888 Sputcn32_0877 Shewanella putrefaciens CN-32 Na+/H+ antiporter YP_001182405.1 973516 D 319224 CDS YP_001182406.1 146291982 5081889 complement(975036..975566) 1 NC_009438.1 KEGG: she:Shewmr4_0781 hypothetical protein; hypothetical protein 975566 5081889 Sputcn32_0878 Shewanella putrefaciens CN-32 hypothetical protein YP_001182406.1 975036 R 319224 CDS YP_001182407.1 146291983 5081890 complement(975577..976398) 1 NC_009438.1 KEGG: shm:Shewmr7_3241 cytochrome c, putative; cytochrome c 976398 5081890 Sputcn32_0879 Shewanella putrefaciens CN-32 cytochrome c YP_001182407.1 975577 R 319224 CDS YP_001182408.1 146291984 5081891 976845..977588 1 NC_009438.1 PFAM: transcriptional regulator domain protein; KEGG: son:SO0940 transcriptional regulator-related protein; transcriptional regulator CadC 977588 5081891 Sputcn32_0880 Shewanella putrefaciens CN-32 transcriptional regulator CadC YP_001182408.1 976845 D 319224 CDS YP_001182409.1 146291985 5081892 977581..978111 1 NC_009438.1 KEGG: she:Shewmr4_0784 hypothetical protein; hypothetical protein 978111 5081892 Sputcn32_0881 Shewanella putrefaciens CN-32 hypothetical protein YP_001182409.1 977581 D 319224 CDS YP_001182410.1 146291986 5081893 978207..979610 1 NC_009438.1 KEGG: shm:Shewmr7_3238 hypothetical protein; hypothetical protein 979610 5081893 Sputcn32_0882 Shewanella putrefaciens CN-32 hypothetical protein YP_001182410.1 978207 D 319224 CDS YP_001182411.1 146291987 5081894 complement(979591..981828) 1 NC_009438.1 KEGG: she:Shewmr4_0786 putative PAS/PAC sensor protein; putative PAS/PAC sensor protein 981828 5081894 Sputcn32_0883 Shewanella putrefaciens CN-32 putative PAS/PAC sensor protein YP_001182411.1 979591 R 319224 CDS YP_001182412.1 146291988 5081895 complement(981997..982704) 1 NC_009438.1 PFAM: Radical SAM domain protein; KEGG: son:SO0944 hypothetical protein; radical SAM domain-containing protein 982704 5081895 Sputcn32_0884 Shewanella putrefaciens CN-32 radical SAM domain-containing protein YP_001182412.1 981997 R 319224 CDS YP_001182413.1 146291989 5081896 complement(982880..986071) 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_3235 acriflavin resistance protein; acriflavin resistance protein 986071 5081896 Sputcn32_0885 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001182413.1 982880 R 319224 CDS YP_001182414.1 146291990 5081897 complement(986071..987282) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_3234 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 987282 5081897 Sputcn32_0886 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001182414.1 986071 R 319224 CDS YP_001182415.1 146291991 5081898 complement(987648..988907) 1 NC_009438.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 988907 5081898 Sputcn32_0887 Shewanella putrefaciens CN-32 ATP-dependent RNA helicase SrmB YP_001182415.1 987648 R 319224 CDS YP_001182416.1 146291992 5081899 complement(989021..989737) 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: she:Shewmr4_0793 methyltransferase small; type 12 methyltransferase 989737 5081899 Sputcn32_0888 Shewanella putrefaciens CN-32 type 12 methyltransferase YP_001182416.1 989021 R 319224 CDS YP_001182417.1 146291993 5081900 990269..991672 1 NC_009438.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: she:Shewmr4_0794 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 991672 5081900 Sputcn32_0889 Shewanella putrefaciens CN-32 branched-chain amino acid transport system II carrier protein YP_001182417.1 990269 D 319224 CDS YP_001182418.1 146291994 5081901 991762..992664 1 NC_009438.1 TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: shm:Shewmr7_3228 tyrosine recombinase XerD; tyrosine recombinase XerD 992664 5081901 Sputcn32_0890 Shewanella putrefaciens CN-32 tyrosine recombinase XerD YP_001182418.1 991762 D 319224 CDS YP_001182419.1 146291995 5081902 992798..993523 1 NC_009438.1 KEGG: shm:Shewmr7_3227 thiol:disulfide interchange protein DsbC; thiol:disulfide interchange protein DsbC 993523 5081902 Sputcn32_0891 Shewanella putrefaciens CN-32 thiol:disulfide interchange protein DsbC YP_001182419.1 992798 D 319224 CDS YP_001182420.1 146291996 5081903 993587..995341 1 NC_009438.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase, RecJ domain protein; phosphoesterase, DHHA1; KEGG: shm:Shewmr7_3226 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 995341 5081903 Sputcn32_0892 Shewanella putrefaciens CN-32 single-stranded-DNA-specific exonuclease RecJ YP_001182420.1 993587 D 319224 CDS YP_001182421.1 146291997 5081904 995365..995694 1 NC_009438.1 KEGG: son:SO0953 hypothetical protein; hypothetical protein 995694 5081904 Sputcn32_0893 Shewanella putrefaciens CN-32 hypothetical protein YP_001182421.1 995365 D 319224 CDS YP_001182422.1 146291998 5081905 995730..996158 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_0799 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 996158 5081905 Sputcn32_0894 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182422.1 995730 D 319224 CDS YP_001182423.1 146291999 5081906 complement(996227..997798) 1 NC_009438.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutaredoxin; KEGG: she:Shewmr4_0800 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 997798 5081906 Sputcn32_0895 Shewanella putrefaciens CN-32 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001182423.1 996227 R 319224 CDS YP_001182424.1 146292000 5081907 complement(997909..998478) 1 NC_009438.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: son:SO0958 alkyl hydroperoxide reductase, C subunit; alkyl hydroperoxide reductase 998478 5081907 Sputcn32_0896 Shewanella putrefaciens CN-32 alkyl hydroperoxide reductase YP_001182424.1 997909 R 319224 CDS YP_001182425.1 146292001 5081908 complement(998854..1000410) 1 NC_009438.1 PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: shm:Shewmr7_3221 leucyl aminopeptidase; leucyl aminopeptidase 1000410 5081908 Sputcn32_0897 Shewanella putrefaciens CN-32 leucyl aminopeptidase YP_001182425.1 998854 R 319224 CDS YP_001182426.1 146292002 5081909 complement(1000500..1001243) 1 NC_009438.1 PFAM: Spermine synthase; KEGG: shm:Shewmr7_3220 spermine synthase; spermine synthase 1001243 5081909 Sputcn32_0898 Shewanella putrefaciens CN-32 spermine synthase YP_001182426.1 1000500 R 319224 CDS YP_001182427.1 146292003 5081910 1001347..1001892 1 NC_009438.1 KEGG: shm:Shewmr7_3219 hypothetical protein; hypothetical protein 1001892 5081910 Sputcn32_0899 Shewanella putrefaciens CN-32 hypothetical protein YP_001182427.1 1001347 D 319224 CDS YP_001182428.1 146292004 5081911 1001909..1002352 1 NC_009438.1 KEGG: psb:Psyr_4989 hypothetical protein; hypothetical protein 1002352 5081911 Sputcn32_0900 Shewanella putrefaciens CN-32 hypothetical protein YP_001182428.1 1001909 D 319224 CDS YP_001182429.1 146292005 5081912 1002444..1002905 1 NC_009438.1 hypothetical protein 1002905 5081912 Sputcn32_0901 Shewanella putrefaciens CN-32 hypothetical protein YP_001182429.1 1002444 D 319224 CDS YP_001182430.1 146292006 5081913 complement(1003044..1003331) 1 NC_009438.1 hypothetical protein 1003331 5081913 Sputcn32_0902 Shewanella putrefaciens CN-32 hypothetical protein YP_001182430.1 1003044 R 319224 CDS YP_001182431.1 146292007 5081914 complement(1003382..1004119) 1 NC_009438.1 PFAM: dienelactone hydrolase; KEGG: she:Shewmr4_0806 dienelactone hydrolase; dienelactone hydrolase 1004119 5081914 Sputcn32_0903 Shewanella putrefaciens CN-32 dienelactone hydrolase YP_001182431.1 1003382 R 319224 CDS YP_001182432.1 146292008 5081915 complement(1004188..1005177) 1 NC_009438.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: shm:Shewmr7_3216 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein; D-isomer specific 2-hydroxyacid dehydrogenase 1005177 5081915 Sputcn32_0904 Shewanella putrefaciens CN-32 D-isomer specific 2-hydroxyacid dehydrogenase YP_001182432.1 1004188 R 319224 CDS YP_001182433.1 146292009 5081916 complement(1005433..1007226) 1 NC_009438.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO0970 fumarate reductase flavoprotein subunit precursor; flavocytochrome c 1007226 5081916 Sputcn32_0905 Shewanella putrefaciens CN-32 flavocytochrome c YP_001182433.1 1005433 R 319224 CDS YP_001182434.1 146292010 5081917 1007724..1008134 1 NC_009438.1 KEGG: she:Shewmr4_0809 hypothetical protein; hypothetical protein 1008134 5081917 Sputcn32_0906 Shewanella putrefaciens CN-32 hypothetical protein YP_001182434.1 1007724 D 319224 CDS YP_001182435.1 146292011 5081918 1008134..1008664 1 NC_009438.1 PFAM: Methyltransferase type 12; KEGG: son:SO0972 hypothetical protein; type 12 methyltransferase 1008664 5081918 Sputcn32_0907 Shewanella putrefaciens CN-32 type 12 methyltransferase YP_001182435.1 1008134 D 319224 CDS YP_001182436.1 146292012 5081820 1008725..1009015 1 NC_009438.1 KEGG: son:SO0973 hypothetical protein; hypothetical protein 1009015 5081820 Sputcn32_0908 Shewanella putrefaciens CN-32 hypothetical protein YP_001182436.1 1008725 D 319224 CDS YP_001182437.1 146292013 5081821 1009072..1010643 1 NC_009438.1 PFAM: Rhomboid family protein; KEGG: son:SO1000 rhomboid family protein; rhomboid family protein 1010643 5081821 Sputcn32_0909 Shewanella putrefaciens CN-32 rhomboid family protein YP_001182437.1 1009072 D 319224 CDS YP_001182438.1 146292014 5081822 complement(1010682..1011779) 1 NC_009438.1 PFAM: sodium/calcium exchanger membrane region; KEGG: son:SO1001 calcium/proton antiporter; sodium/calcium exchanger membrane region 1011779 5081822 Sputcn32_0910 Shewanella putrefaciens CN-32 sodium/calcium exchanger membrane region YP_001182438.1 1010682 R 319224 CDS YP_001182439.1 146292015 5081823 1012008..1012325 1 NC_009438.1 hypothetical protein 1012325 5081823 Sputcn32_0911 Shewanella putrefaciens CN-32 hypothetical protein YP_001182439.1 1012008 D 319224 CDS YP_001182440.1 146292016 5081824 complement(1012474..1014216) 1 NC_009438.1 KEGG: son:SO1003 hypothetical protein; hypothetical protein 1014216 5081824 Sputcn32_0912 Shewanella putrefaciens CN-32 hypothetical protein YP_001182440.1 1012474 R 319224 CDS YP_001182441.1 146292017 5081825 complement(1014226..1016499) 1 NC_009438.1 KEGG: son:SO1004 hypothetical protein; hypothetical protein 1016499 5081825 Sputcn32_0913 Shewanella putrefaciens CN-32 hypothetical protein YP_001182441.1 1014226 R 319224 CDS YP_001182442.1 146292018 5081826 complement(1016700..1017254) 1 NC_009438.1 PFAM: protein of unknown function UPF0016; KEGG: she:Shewmr4_3028 protein of unknown function UPF0016; hypothetical protein 1017254 5081826 Sputcn32_0914 Shewanella putrefaciens CN-32 hypothetical protein YP_001182442.1 1016700 R 319224 CDS YP_001182443.1 146292019 5081827 1017493..1017762 1 NC_009438.1 hypothetical protein 1017762 5081827 Sputcn32_0915 Shewanella putrefaciens CN-32 hypothetical protein YP_001182443.1 1017493 D 319224 CDS YP_001182444.1 146292020 5081828 1017958..1019145 1 NC_009438.1 PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane; KEGG: shm:Shewmr7_0948 aromatic amino acid permease; aromatic amino acid permease 1019145 5081828 Sputcn32_0916 Shewanella putrefaciens CN-32 aromatic amino acid permease YP_001182444.1 1017958 D 319224 CDS YP_001182445.1 146292021 5081829 1019408..1021564 1 NC_009438.1 KEGG: shm:Shewmr7_0949 hypothetical protein; hypothetical protein 1021564 5081829 Sputcn32_0917 Shewanella putrefaciens CN-32 hypothetical protein YP_001182445.1 1019408 D 319224 CDS YP_001182446.1 146292022 5081830 complement(1022344..1022547) 1 NC_009438.1 KEGG: son:SO4411 hypothetical protein; hypothetical protein 1022547 5081830 Sputcn32_0918 Shewanella putrefaciens CN-32 hypothetical protein YP_001182446.1 1022344 R 319224 CDS YP_001182447.1 146292023 5081831 complement(1023125..1023823) 1 NC_009438.1 KEGG: son:SOA0150 hypothetical protein; hypothetical protein 1023823 5081831 Sputcn32_0919 Shewanella putrefaciens CN-32 hypothetical protein YP_001182447.1 1023125 R 319224 CDS YP_001182448.1 146292024 5081832 complement(1024314..1024775) 1 NC_009438.1 hypothetical protein 1024775 5081832 Sputcn32_0920 Shewanella putrefaciens CN-32 hypothetical protein YP_001182448.1 1024314 R 319224 CDS YP_001182449.1 146292025 5081833 complement(1025306..1025560) 1 NC_009438.1 KEGG: son:SO0729 hypothetical protein; hypothetical protein 1025560 5081833 Sputcn32_0921 Shewanella putrefaciens CN-32 hypothetical protein YP_001182449.1 1025306 R 319224 CDS YP_001182450.1 146292026 5081834 complement(1025836..1026564) 1 NC_009438.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: shm:Shewmr7_0952 pseudouridine synthase, Rsu; pseudouridine synthase 1026564 5081834 Sputcn32_0922 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001182450.1 1025836 R 319224 CDS YP_001182451.1 146292027 5081835 complement(1026573..1027271) 1 NC_009438.1 KEGG: she:Shewmr4_0918 hypothetical protein; hypothetical protein 1027271 5081835 Sputcn32_0923 Shewanella putrefaciens CN-32 hypothetical protein YP_001182451.1 1026573 R 319224 CDS YP_001182452.1 146292028 5081836 complement(1027449..1028786) 1 NC_009438.1 PFAM: Na+/H+ antiporter NhaC; KEGG: shm:Shewmr7_0954 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 1028786 5081836 Sputcn32_0924 Shewanella putrefaciens CN-32 Na+/H+ antiporter NhaC YP_001182452.1 1027449 R 319224 CDS YP_001182453.1 146292029 5081837 complement(1029132..1030763) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_0924 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1030763 5081837 Sputcn32_0925 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182453.1 1029132 R 319224 CDS YP_001182454.1 146292030 5081838 complement(1030921..1031808) 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: son:SO1091 hypothetical protein; hypothetical protein 1031808 5081838 Sputcn32_0926 Shewanella putrefaciens CN-32 hypothetical protein YP_001182454.1 1030921 R 319224 CDS YP_001182455.1 146292031 5081839 1031991..1032770 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: shm:Shewmr7_0961 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 1032770 5081839 Sputcn32_0927 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001182455.1 1031991 D 319224 CDS YP_001182456.1 146292032 5081840 complement(1033389..1033796) 1 NC_009438.1 KEGG: son:SO1094 hypothetical transcription elongation factor; GreA/GreB family elongation factor 1033796 5081840 Sputcn32_0928 Shewanella putrefaciens CN-32 GreA/GreB family elongation factor YP_001182456.1 1033389 R 319224 CDS YP_001182457.1 146292033 5081841 complement(1034498..1035505) 1 NC_009438.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: shm:Shewmr7_0963 cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 1035505 5081841 Sputcn32_0929 Shewanella putrefaciens CN-32 cytochrome d ubiquinol oxidase subunit II YP_001182457.1 1034498 R 319224 CDS YP_001182458.1 146292034 5081842 complement(1035566..1036900) 1 NC_009438.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: shm:Shewmr7_0964 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1036900 5081842 Sputcn32_0930 Shewanella putrefaciens CN-32 cytochrome bd ubiquinol oxidase subunit I YP_001182458.1 1035566 R 319224 CDS YP_001182459.1 146292035 5081843 1037059..1038498 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: shm:Shewmr7_0965 transcriptional regulator, GntR family; GntR family transcriptional regulator 1038498 5081843 Sputcn32_0931 Shewanella putrefaciens CN-32 GntR family transcriptional regulator YP_001182459.1 1037059 D 319224 CDS YP_001182460.1 146292036 5081844 1038622..1039920 1 NC_009438.1 KEGG: shm:Shewmr7_0966 O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; O-acetylhomoserine/O-acetylserine sulfhydrylase 1039920 5081844 Sputcn32_0932 Shewanella putrefaciens CN-32 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001182460.1 1038622 D 319224 CDS YP_001182461.1 146292037 5081845 complement(1040041..1043232) 1 NC_009438.1 KEGG: son:SO1096 hypothetical protein; hypothetical protein 1043232 5081845 Sputcn32_0933 Shewanella putrefaciens CN-32 hypothetical protein YP_001182461.1 1040041 R 319224 CDS YP_001182462.1 146292038 5081846 complement(1043437..1044645) 1 NC_009438.1 PFAM: methyltransferase small; Methyltransferase type 12; KEGG: son:SO1097 putative ribosomal RNA small subunit methyltransferase D; rRNA (guanine-N(2)-)-methyltransferase 1044645 5081846 Sputcn32_0934 Shewanella putrefaciens CN-32 rRNA (guanine-N(2)-)-methyltransferase YP_001182462.1 1043437 R 319224 CDS YP_001182463.1 146292039 5081847 1044657..1045271 1 NC_009438.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: shm:Shewmr7_0969 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 1045271 5081847 Sputcn32_0935 Shewanella putrefaciens CN-32 2OG-Fe(II) oxygenase YP_001182463.1 1044657 D 319224 CDS YP_001182464.1 146292040 5081848 1045397..1045717 1 NC_009438.1 PFAM: BolA family protein; KEGG: shm:Shewmr7_0970 BolA family protein; BolA family protein 1045717 5081848 Sputcn32_0936 Shewanella putrefaciens CN-32 BolA family protein YP_001182464.1 1045397 D 319224 CDS YP_001182465.1 146292041 5081849 1045916..1047025 1 NC_009438.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: shm:Shewmr7_0971 TRAP dicarboxylate transporter-DctP subunit; TRAP dicarboxylate transporter- DctP subunit 1047025 5081849 Sputcn32_0937 Shewanella putrefaciens CN-32 TRAP dicarboxylate transporter- DctP subunit YP_001182465.1 1045916 D 319224 CDS YP_001182466.1 146292042 5081850 1047152..1047661 1 NC_009438.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 1047661 5081850 Sputcn32_0938 Shewanella putrefaciens CN-32 S-ribosylhomocysteinase YP_001182466.1 1047152 D 319224 CDS YP_001182467.1 146292043 5081851 1047827..1049878 1 NC_009438.1 PFAM: TonB-dependent receptor; KEGG: she:Shewmr4_0935 TonB-dependent receptor; TonB-dependent receptor 1049878 5081851 Sputcn32_0939 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001182467.1 1047827 D 319224 CDS YP_001182468.1 146292044 5081852 1050280..1051614 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 1051614 5081852 Sputcn32_0940 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit A YP_001182468.1 1050280 D 319224 CDS YP_001182469.1 146292045 5081853 1051614..1052813 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 1052813 5081853 Sputcn32_0941 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit B YP_001182469.1 1051614 D 319224 CDS YP_001182470.1 146292046 5081854 1052806..1053594 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit C 1053594 5081854 Sputcn32_0942 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit C YP_001182470.1 1052806 D 319224 CDS YP_001182471.1 146292047 5081855 1053594..1054226 1 NC_009438.1 Part of the NQR complex which catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit D 1054226 5081855 Sputcn32_0943 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit D YP_001182471.1 1053594 D 319224 CDS YP_001182472.1 146292048 5081856 1054232..1054840 1 NC_009438.1 Part of the NQR complex which consists of NqrA, NqrB, NqrC, NqrD, NqrE and NqrF; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm; NqrE is probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.; Na(+)-translocating NADH-quinone reductase subunit E 1054840 5081856 Sputcn32_0944 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit E YP_001182472.1 1054232 D 319224 CDS YP_001182473.1 146292049 5081857 1054887..1056143 1 NC_009438.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 1056143 5081857 Sputcn32_0945 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit F YP_001182473.1 1054887 D 319224 CDS YP_001182474.1 146292050 5081858 1056243..1057286 1 NC_009438.1 PFAM: ApbE family lipoprotein; KEGG: she:Shewmr4_0942 ApbE family lipoprotein; ApbE family lipoprotein 1057286 5081858 Sputcn32_0946 Shewanella putrefaciens CN-32 ApbE family lipoprotein YP_001182474.1 1056243 D 319224 CDS YP_001182475.1 146292051 5081859 1057298..1057522 1 NC_009438.1 PFAM: protein of unknown function DUF539; KEGG: shm:Shewmr7_0981 protein of unknown function DUF539; hypothetical protein 1057522 5081859 Sputcn32_0947 Shewanella putrefaciens CN-32 hypothetical protein YP_001182475.1 1057298 D 319224 CDS YP_001182476.1 146292052 5081860 1057767..1058240 1 NC_009438.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: shm:Shewmr7_0982 bacterioferritin; bacterioferritin 1058240 5081860 Sputcn32_0948 Shewanella putrefaciens CN-32 bacterioferritin YP_001182476.1 1057767 D 319224 CDS YP_001182477.1 146292053 5081861 1058250..1058717 1 NC_009438.1 TIGRFAM: bacterioferritin; PFAM: Ferritin, Dps family protein; KEGG: son:SO1112 bacterioferritin subunit 1; bacterioferritin 1058717 5081861 Sputcn32_0949 Shewanella putrefaciens CN-32 bacterioferritin YP_001182477.1 1058250 D 319224 CDS YP_001182478.1 146292054 5081862 1059013..1061016 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_0946 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1061016 5081862 Sputcn32_0950 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182478.1 1059013 D 319224 CDS YP_001182479.1 146292055 5081863 1061087..1062226 1 NC_009438.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1062226 5081863 Sputcn32_0951 Shewanella putrefaciens CN-32 DNA polymerase IV YP_001182479.1 1061087 D 319224 CDS YP_001182480.1 146292056 5081864 complement(1062269..1063168) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: ilo:IL2190 transcriptional regulator, LysR family; LysR family transcriptional regulator 1063168 5081864 Sputcn32_0952 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001182480.1 1062269 R 319224 CDS YP_001182481.1 146292057 5081865 1063261..1064193 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: ilo:IL2191 predicted permease, DMT superfamily; hypothetical protein 1064193 5081865 Sputcn32_0953 Shewanella putrefaciens CN-32 hypothetical protein YP_001182481.1 1063261 D 319224 CDS YP_001182482.1 146292058 5081866 complement(1064349..1065824) 1 NC_009438.1 KEGG: she:Shewmr4_0948 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 1065824 5081866 Sputcn32_0954 Shewanella putrefaciens CN-32 aminoacyl-histidine dipeptidase YP_001182482.1 1064349 R 319224 CDS YP_001182483.1 146292059 5081867 1066029..1067567 1 NC_009438.1 PFAM: peptidase M17, leucyl aminopeptidase domain protein; KEGG: shm:Shewmr7_0987 peptidase M17, leucyl aminopeptidase domain protein; peptidase M17, leucyl aminopeptidase domain-containing protein 1067567 5081867 Sputcn32_0955 Shewanella putrefaciens CN-32 peptidase M17, leucyl aminopeptidase domain-containing protein YP_001182483.1 1066029 D 319224 CDS YP_001182484.1 146292060 5081868 1067851..1068027 1 NC_009438.1 KEGG: sfr:Sfri_0964 hypothetical protein; hypothetical protein 1068027 5081868 Sputcn32_0956 Shewanella putrefaciens CN-32 hypothetical protein YP_001182484.1 1067851 D 319224 CDS YP_001182485.1 146292061 5081770 1068434..1069411 1 NC_009438.1 PFAM: protein of unknown function DUF1568; KEGG: son:SO1890 hypothetical protein; hypothetical protein 1069411 5081770 Sputcn32_0957 Shewanella putrefaciens CN-32 hypothetical protein YP_001182485.1 1068434 D 319224 CDS YP_001182486.1 146292062 5081771 1069768..1070139 1 NC_009438.1 KEGG: sdn:Sden_1152 hypothetical protein; hypothetical protein 1070139 5081771 Sputcn32_0958 Shewanella putrefaciens CN-32 hypothetical protein YP_001182486.1 1069768 D 319224 CDS YP_001182487.1 146292063 5081772 complement(1070643..1070987) 1 NC_009438.1 KEGG: son:SO3676 hypothetical protein; hypothetical protein 1070987 5081772 Sputcn32_0959 Shewanella putrefaciens CN-32 hypothetical protein YP_001182487.1 1070643 R 319224 CDS YP_001182488.1 146292064 5081773 complement(1071101..1071925) 1 NC_009438.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 1071925 hmuV 5081773 hmuV Shewanella putrefaciens CN-32 hemin importer ATP-binding subunit YP_001182488.1 1071101 R 319224 CDS YP_001182489.1 146292065 5081774 complement(1071938..1072969) 1 NC_009438.1 PFAM: transport system permease protein; KEGG: son:SO3674 hemin ABC transporter, permease protein; transport system permease 1072969 5081774 Sputcn32_0961 Shewanella putrefaciens CN-32 transport system permease YP_001182489.1 1071938 R 319224 CDS YP_001182490.1 146292066 5081775 complement(1072981..1074027) 1 NC_009438.1 PFAM: periplasmic binding protein; KEGG: son:SO3673 hemin ABC transporter, periplasmic hemin-binding protein; periplasmic binding protein 1074027 5081775 Sputcn32_0962 Shewanella putrefaciens CN-32 periplasmic binding protein YP_001182490.1 1072981 R 319224 CDS YP_001182491.1 146292067 5081776 complement(1074113..1074550) 1 NC_009438.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: son:SO3672 TonB system transport protein ExbD1; biopolymer transport protein ExbD/TolR 1074550 5081776 Sputcn32_0963 Shewanella putrefaciens CN-32 biopolymer transport protein ExbD/TolR YP_001182491.1 1074113 R 319224 CDS YP_001182492.1 146292068 5081777 complement(1074547..1075281) 1 NC_009438.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: son:SO3671 TonB system transport protein ExbB1; MotA/TolQ/ExbB proton channel 1075281 5081777 Sputcn32_0964 Shewanella putrefaciens CN-32 MotA/TolQ/ExbB proton channel YP_001182492.1 1074547 R 319224 CDS YP_001182493.1 146292069 5081778 complement(1075344..1076195) 1 NC_009438.1 TIGRFAM: TonB family protein; KEGG: son:SO3670 TonB1 protein; TonB family protein 1076195 5081778 Sputcn32_0965 Shewanella putrefaciens CN-32 TonB family protein YP_001182493.1 1075344 R 319224 CDS YP_001182494.1 146292070 5081779 1076428..1078518 1 NC_009438.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO3669 heme transport protein; TonB-dependent heme/hemoglobin receptor family protein 1078518 5081779 Sputcn32_0966 Shewanella putrefaciens CN-32 TonB-dependent heme/hemoglobin receptor family protein YP_001182494.1 1076428 D 319224 CDS YP_001182495.1 146292071 5081780 1078545..1079117 1 NC_009438.1 PFAM: protein of unknown function DUF1008; KEGG: son:SO3668 hypothetical protein; hypothetical protein 1079117 5081780 Sputcn32_0967 Shewanella putrefaciens CN-32 hypothetical protein YP_001182495.1 1078545 D 319224 CDS YP_001182496.1 146292072 5081781 1079153..1079710 1 NC_009438.1 PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: son:SO3667 hypothetical protein; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1079710 5081781 Sputcn32_0968 Shewanella putrefaciens CN-32 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_001182496.1 1079153 D 319224 CDS YP_001182497.1 146292073 5081782 1079902..1081743 1 NC_009438.1 KEGG: she:Shewmr4_0882 lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein 1081743 5081782 Sputcn32_0969 Shewanella putrefaciens CN-32 lipid ABC transporter ATPase/inner membrane protein YP_001182497.1 1079902 D 319224 CDS YP_001182498.1 146292074 5081783 complement(1081844..1083445) 1 NC_009438.1 PFAM: AMP-dependent synthetase and ligase; KEGG: shm:Shewmr7_3139 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1083445 5081783 Sputcn32_0970 Shewanella putrefaciens CN-32 AMP-dependent synthetase and ligase YP_001182498.1 1081844 R 319224 CDS YP_001182499.1 146292075 5081784 complement(1083852..1085315) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_3136 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1085315 5081784 Sputcn32_0971 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001182499.1 1083852 R 319224 CDS YP_001182500.1 146292076 5081785 complement(1085486..1086952) 1 NC_009438.1 KEGG: she:Shewmr4_0887 transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase; Fis family transcriptional regulator 1086952 5081785 Sputcn32_0972 Shewanella putrefaciens CN-32 Fis family transcriptional regulator YP_001182500.1 1085486 R 319224 CDS YP_001182501.1 146292077 5081786 complement(1087167..1087766) 1 NC_009438.1 KEGG: she:Shewmr4_0888 thiol:disulfide interchange protein, putative; thiol:disulfide interchange protein 1087766 5081786 Sputcn32_0973 Shewanella putrefaciens CN-32 thiol:disulfide interchange protein YP_001182501.1 1087167 R 319224 CDS YP_001182502.1 146292078 5081787 1087949..1088563 1 NC_009438.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shm:Shewmr7_3132 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1088563 5081787 Sputcn32_0974 Shewanella putrefaciens CN-32 lysine exporter protein LysE/YggA YP_001182502.1 1087949 D 319224 CDS YP_001182503.1 146292079 5081788 complement(1088629..1088952) 1 NC_009438.1 KEGG: son:SO3656 hypothetical protein; hypothetical protein 1088952 5081788 Sputcn32_0975 Shewanella putrefaciens CN-32 hypothetical protein YP_001182503.1 1088629 R 319224 CDS YP_001182504.1 146292080 5081789 complement(1089026..1089568) 1 NC_009438.1 KEGG: son:SO3655 pilin, putative; pilin 1089568 5081789 Sputcn32_0976 Shewanella putrefaciens CN-32 pilin YP_001182504.1 1089026 R 319224 CDS YP_001182505.1 146292081 5081790 1089752..1090417 1 NC_009438.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1090417 5081790 Sputcn32_0977 Shewanella putrefaciens CN-32 uracil-DNA glycosylase YP_001182505.1 1089752 D 319224 CDS YP_001182506.1 146292082 5081791 complement(1090480..1091475) 1 NC_009438.1 PFAM: Polyprenyl synthetase; KEGG: shm:Shewmr7_3126 trans-hexaprenyltranstransferase; trans-hexaprenyltranstransferase 1091475 5081791 Sputcn32_0978 Shewanella putrefaciens CN-32 trans-hexaprenyltranstransferase YP_001182506.1 1090480 R 319224 CDS YP_001182507.1 146292083 5081792 1091727..1092038 1 NC_009438.1 PFAM: ribosomal protein L21; KEGG: sdn:Sden_2927 ribosomal protein L21; 50S ribosomal protein L21 1092038 rplU 5081792 rplU Shewanella putrefaciens CN-32 50S ribosomal protein L21 YP_001182507.1 1091727 D 319224 CDS YP_001182508.1 146292084 5081793 1092053..1092307 1 NC_009438.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1092307 rpmA 5081793 rpmA Shewanella putrefaciens CN-32 50S ribosomal protein L27 YP_001182508.1 1092053 D 319224 CDS YP_001182509.1 146292085 5081794 1092523..1093689 1 NC_009438.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1093689 obgE 5081794 obgE Shewanella putrefaciens CN-32 GTPase ObgE YP_001182509.1 1092523 D 319224 CDS YP_001182510.1 146292086 5081795 1093717..1094478 1 NC_009438.1 PFAM: protein of unknown function DUF1212; KEGG: she:Shewmr4_0898 protein of unknown function DUF1212; hypothetical protein 1094478 5081795 Sputcn32_0982 Shewanella putrefaciens CN-32 hypothetical protein YP_001182510.1 1093717 D 319224 CDS YP_001182511.1 146292087 5081796 1094475..1094948 1 NC_009438.1 KEGG: son:SO3647 hypothetical protein; hypothetical protein 1094948 5081796 Sputcn32_0983 Shewanella putrefaciens CN-32 hypothetical protein YP_001182511.1 1094475 D 319224 CDS YP_001182512.1 146292088 5081797 1094978..1095460 1 NC_009438.1 PFAM: dihydrofolate reductase region; KEGG: shm:Shewmr7_3120 dihydrofolate reductase; dihydrofolate reductase 1095460 5081797 Sputcn32_0984 Shewanella putrefaciens CN-32 dihydrofolate reductase YP_001182512.1 1094978 D 319224 CDS YP_001182513.1 146292089 5081798 1095676..1096092 1 NC_009438.1 KEGG: son:SO3645 hypothetical protein; hypothetical protein 1096092 5081798 Sputcn32_0985 Shewanella putrefaciens CN-32 hypothetical protein YP_001182513.1 1095676 D 319224 CDS YP_001182514.1 146292090 5081799 complement(1096277..1098298) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_0902 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1098298 5081799 Sputcn32_0986 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182514.1 1096277 R 319224 CDS YP_001182515.1 146292091 5081800 complement(1098394..1099218) 1 NC_009438.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1099218 apaH 5081800 apaH Shewanella putrefaciens CN-32 diadenosine tetraphosphatase YP_001182515.1 1098394 R 319224 CDS YP_001182516.1 146292092 5081801 complement(1099240..1099620) 1 NC_009438.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 1099620 apaG 5081801 apaG Shewanella putrefaciens CN-32 ApaG protein YP_001182516.1 1099240 R 319224 CDS YP_001182517.1 146292093 5081802 complement(1099672..1100478) 1 NC_009438.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1100478 ksgA 5081802 ksgA Shewanella putrefaciens CN-32 dimethyladenosine transferase YP_001182517.1 1099672 R 319224 CDS YP_001182518.1 146292094 5081803 complement(1100494..1101480) 1 NC_009438.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1101480 pdxA 5081803 pdxA Shewanella putrefaciens CN-32 4-hydroxythreonine-4-phosphate dehydrogenase YP_001182518.1 1100494 R 319224 CDS YP_001182519.1 146292095 5081804 complement(1101487..1102791) 1 NC_009438.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: she:Shewmr4_0907 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1102791 5081804 Sputcn32_0991 Shewanella putrefaciens CN-32 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001182519.1 1101487 R 319224 CDS YP_001182520.1 146292096 5081805 complement(1103035..1105332) 1 NC_009438.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: shm:Shewmr7_3112 organic solvent tolerance protein; organic solvent tolerance protein 1105332 5081805 Sputcn32_0992 Shewanella putrefaciens CN-32 organic solvent tolerance protein YP_001182520.1 1103035 R 319224 CDS YP_001182521.1 146292097 5081759 1105449..1106528 1 NC_009438.1 PFAM: aminoglycoside phosphotransferase; KEGG: she:Shewmr4_0909 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 1106528 5081759 Sputcn32_0993 Shewanella putrefaciens CN-32 aminoglycoside phosphotransferase YP_001182521.1 1105449 D 319224 CDS YP_001182522.1 146292098 5081760 1106529..1107206 1 NC_009438.1 PFAM: Nucleotidyl transferase; KEGG: son:SO3634 nucleotidyltransferase family protein; nucleotidyl transferase 1107206 5081760 Sputcn32_0994 Shewanella putrefaciens CN-32 nucleotidyl transferase YP_001182522.1 1106529 D 319224 CDS YP_001182523.1 146292099 5081761 1107273..1108061 1 NC_009438.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 1108061 djlA 5081761 djlA Shewanella putrefaciens CN-32 Dna-J like membrane chaperone protein YP_001182523.1 1107273 D 319224 CDS YP_001182524.1 146292100 5081762 1108103..1108741 1 NC_009438.1 KEGG: shm:Shewmr7_3108 hypothetical protein; hypothetical protein 1108741 5081762 Sputcn32_0996 Shewanella putrefaciens CN-32 hypothetical protein YP_001182524.1 1108103 D 319224 CDS YP_001182525.1 146292101 5081763 1108766..1109719 1 NC_009438.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: shm:Shewmr7_3107 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein; D-isomer specific 2-hydroxyacid dehydrogenase 1109719 5081763 Sputcn32_0997 Shewanella putrefaciens CN-32 D-isomer specific 2-hydroxyacid dehydrogenase YP_001182525.1 1108766 D 319224 CDS YP_001182526.1 146292102 5081764 complement(1109789..1112062) 1 NC_009438.1 PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: shm:Shewmr7_3103 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1112062 5081764 Sputcn32_0998 Shewanella putrefaciens CN-32 hypothetical protein YP_001182526.1 1109789 R 319224 CDS YP_001182527.1 146292103 5081765 complement(1112052..1113533) 1 NC_009438.1 KEGG: she:Shewmr4_3021 hypothetical protein; hypothetical protein 1113533 5081765 Sputcn32_0999 Shewanella putrefaciens CN-32 hypothetical protein YP_001182527.1 1112052 R 319224 CDS YP_001182528.1 146292104 5081766 complement(1113688..1115412) 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: sdn:Sden_0688 pseudouridine synthase; pseudouridine synthase 1115412 5081766 Sputcn32_1000 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001182528.1 1113688 R 319224 CDS YP_001182529.1 146292105 5081767 complement(1115663..1116838) 1 NC_009438.1 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 1116838 purT 5081767 purT Shewanella putrefaciens CN-32 phosphoribosylglycinamide formyltransferase 2 YP_001182529.1 1115663 R 319224 CDS YP_001182530.1 146292106 5081768 complement(1117161..1118291) 1 NC_009438.1 KEGG: son:SO3602 sulfate ABC transporter, ATP-binding protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; sulfate ABC transporter ATPase 1118291 5081768 Sputcn32_1002 Shewanella putrefaciens CN-32 sulfate ABC transporter ATPase YP_001182530.1 1117161 R 319224 CDS YP_001182531.1 146292107 5081769 complement(1118288..1119157) 1 NC_009438.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO3601 sulfate ABC transporter, permease protein; sulfate ABC transporter permease 1119157 5081769 Sputcn32_1003 Shewanella putrefaciens CN-32 sulfate ABC transporter permease YP_001182531.1 1118288 R 319224 CDS YP_001182532.1 146292108 5081806 complement(1119167..1120012) 1 NC_009438.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO3600 sulfate ABC transporter, permease protein; sulfate ABC transporter permease 1120012 5081806 Sputcn32_1004 Shewanella putrefaciens CN-32 sulfate ABC transporter permease YP_001182532.1 1119167 R 319224 CDS YP_001182533.1 146292109 5081807 complement(1120199..1121206) 1 NC_009438.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein, family 1; KEGG: she:Shewmr4_3012 sulfate ABC transporter, periplasmic sulfate-binding protein; sulfate ABC transporter substrate-binding protein 1121206 5081807 Sputcn32_1005 Shewanella putrefaciens CN-32 sulfate ABC transporter substrate-binding protein YP_001182533.1 1120199 R 319224 CDS YP_001182534.1 146292110 5081808 1121418..1122296 1 NC_009438.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 1122296 cysM 5081808 cysM Shewanella putrefaciens CN-32 cysteine synthase B YP_001182534.1 1121418 D 319224 CDS YP_001182535.1 146292111 5081809 complement(1122372..1122908) 1 NC_009438.1 KEGG: she:Shewmr4_3009 hypothetical protein; hypothetical protein 1122908 5081809 Sputcn32_1007 Shewanella putrefaciens CN-32 hypothetical protein YP_001182535.1 1122372 R 319224 CDS YP_001182536.1 146292112 5081810 1123080..1123388 1 NC_009438.1 PFAM: protein of unknown function DUF1289; KEGG: shm:Shewmr7_3089 protein of unknown function DUF1289; hypothetical protein 1123388 5081810 Sputcn32_1008 Shewanella putrefaciens CN-32 hypothetical protein YP_001182536.1 1123080 D 319224 CDS YP_001182537.1 146292113 5081811 complement(1123488..1124756) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: she:Shewmr4_3007 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1124756 5081811 Sputcn32_1009 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001182537.1 1123488 R 319224 CDS YP_001182538.1 146292114 5081812 complement(1124766..1125479) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shm:Shewmr7_3087 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1125479 5081812 Sputcn32_1010 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001182538.1 1124766 R 319224 CDS YP_001182539.1 146292115 5081813 complement(1125479..1125892) 1 NC_009438.1 KEGG: shm:Shewmr7_3086 hypothetical protein; hypothetical protein 1125892 5081813 Sputcn32_1011 Shewanella putrefaciens CN-32 hypothetical protein YP_001182539.1 1125479 R 319224 CDS YP_001182540.1 146292116 5081814 complement(1125898..1126764) 1 NC_009438.1 PFAM: MltA-interacting MipA family protein; KEGG: son:SO3592 putative outer membrane protein; MltA-interacting MipA family protein 1126764 5081814 Sputcn32_1012 Shewanella putrefaciens CN-32 MltA-interacting MipA family protein YP_001182540.1 1125898 R 319224 CDS YP_001182541.1 146292117 5081815 complement(1127143..1127379) 1 NC_009438.1 KEGG: shm:Shewmr7_3084 hypothetical protein; hypothetical protein 1127379 5081815 Sputcn32_1013 Shewanella putrefaciens CN-32 hypothetical protein YP_001182541.1 1127143 R 319224 CDS YP_001182542.1 146292118 5081816 1128142..1128705 1 NC_009438.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: son:SO3588 gpr1/fun34/YaaH family protein; GPR1/FUN34/yaaH family protein 1128705 5081816 Sputcn32_1014 Shewanella putrefaciens CN-32 GPR1/FUN34/yaaH family protein YP_001182542.1 1128142 D 319224 CDS YP_001182543.1 146292119 5081817 complement(1128759..1129229) 1 NC_009438.1 KEGG: son:SO3587 hypothetical protein; hypothetical protein 1129229 5081817 Sputcn32_1015 Shewanella putrefaciens CN-32 hypothetical protein YP_001182543.1 1128759 R 319224 CDS YP_001182544.1 146292120 5081818 complement(1129424..1129840) 1 NC_009438.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shm:Shewmr7_3081 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1129840 5081818 Sputcn32_1016 Shewanella putrefaciens CN-32 glyoxalase/bleomycin resistance protein/dioxygenase YP_001182544.1 1129424 R 319224 CDS YP_001182545.1 146292121 5081819 complement(1129897..1130511) 1 NC_009438.1 PFAM: NADPH-dependent FMN reductase; KEGG: shm:Shewmr7_3080 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1130511 5081819 Sputcn32_1017 Shewanella putrefaciens CN-32 NADPH-dependent FMN reductase YP_001182545.1 1129897 R 319224 CDS YP_001182546.1 146292122 5081714 1130658..1131290 1 NC_009438.1 PFAM: Helix-turn-helix, type 11 domain protein; KEGG: she:Shewmr4_2998 putative transcriptional regulator; putative transcriptional regulator 1131290 5081714 Sputcn32_1018 Shewanella putrefaciens CN-32 putative transcriptional regulator YP_001182546.1 1130658 D 319224 CDS YP_001182547.1 146292123 5081715 1131352..1132062 1 NC_009438.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: she:Shewmr4_2997 pseudouridine synthase, Rsu; pseudouridine synthase 1132062 5081715 Sputcn32_1019 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001182547.1 1131352 D 319224 CDS YP_001182548.1 146292124 5081716 complement(1132084..1133709) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_3076 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1133709 5081716 Sputcn32_1020 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182548.1 1132084 R 319224 CDS YP_001182549.1 146292125 5081720 complement(1134461..1135222) 1 NC_009438.1 KEGG: shm:Shewmr7_3075 putative lipoprotein; putative lipoprotein 1135222 5081720 Sputcn32_1021 Shewanella putrefaciens CN-32 putative lipoprotein YP_001182549.1 1134461 R 319224 CDS YP_001182550.1 146292126 5081721 1135345..1136319 1 NC_009438.1 KEGG: shm:Shewmr7_3074 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1136319 5081721 Sputcn32_1022 Shewanella putrefaciens CN-32 RluA family pseudouridine synthase YP_001182550.1 1135345 D 319224 CDS YP_001182551.1 146292127 5081722 1136320..1137054 1 NC_009438.1 PFAM: protein of unknown function DUF152; KEGG: son:SO3578 conserved hypothetical protein TIGR00726; hypothetical protein 1137054 5081722 Sputcn32_1023 Shewanella putrefaciens CN-32 hypothetical protein YP_001182551.1 1136320 D 319224 CDS YP_001182552.1 146292128 5081723 1137253..1139826 1 NC_009438.1 PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: shm:Shewmr7_3072 ATPase AAA-2 domain protein; ATPase 1139826 5081723 Sputcn32_1024 Shewanella putrefaciens CN-32 ATPase YP_001182552.1 1137253 D 319224 CDS YP_001182553.1 146292129 5081724 complement(1139930..1140397) 1 NC_009438.1 KEGG: shm:Shewmr7_3071 hypothetical protein; hypothetical protein 1140397 5081724 Sputcn32_1025 Shewanella putrefaciens CN-32 hypothetical protein YP_001182553.1 1139930 R 319224 CDS YP_001182554.1 146292130 5081725 1140493..1141344 1 NC_009438.1 KEGG: son:SO3575 CDP-diacylglycerol--serine O-phosphatidyltransferase, putative; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--serine O-phosphatidyltransferase 1141344 5081725 Sputcn32_1026 Shewanella putrefaciens CN-32 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001182554.1 1140493 D 319224 CDS YP_001182555.1 146292131 5081730 1147970..1148344 1 NC_009438.1 KEGG: sfr:Sfri_1559 ISSod10, transposase OrfB; ISSod10, transposase OrfB 1148344 5081730 Sputcn32_1028 Shewanella putrefaciens CN-32 ISSod10, transposase OrfB YP_001182555.1 1147970 D 319224 CDS YP_001182556.1 146292132 5081731 1148793..1149059 1 NC_009438.1 TIGRFAM: sodium pump decarboxylases, gamma subunit; PFAM: sodium pump decarboxylase, gamma subunit; KEGG: she:Shewmr4_2987 sodium pump decarboxylases, gamma subunit; sodium pump decarboxylase subunit gamma 1149059 5081731 Sputcn32_1029 Shewanella putrefaciens CN-32 sodium pump decarboxylase subunit gamma YP_001182556.1 1148793 D 319224 CDS YP_001182557.1 146292133 5081732 1149071..1150897 1 NC_009438.1 catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 1150897 5081732 Sputcn32_1030 Shewanella putrefaciens CN-32 oxaloacetate decarboxylase YP_001182557.1 1149071 D 319224 CDS YP_001182558.1 146292134 5081733 1150906..1152036 1 NC_009438.1 KEGG: she:Shewmr4_2985 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta 1152036 5081733 Sputcn32_1031 Shewanella putrefaciens CN-32 sodium ion-translocating decarboxylase subunit beta YP_001182558.1 1150906 D 319224 CDS YP_001182559.1 146292135 5081734 complement(1152077..1152244) 1 NC_009438.1 KEGG: shm:Shewmr7_3066 hypothetical protein; hypothetical protein 1152244 5081734 Sputcn32_1032 Shewanella putrefaciens CN-32 hypothetical protein YP_001182559.1 1152077 R 319224 CDS YP_001182560.1 146292136 5081735 complement(1152418..1153677) 1 NC_009438.1 PFAM: sodium:dicarboxylate symporter; KEGG: shm:Shewmr7_3065 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1153677 5081735 Sputcn32_1033 Shewanella putrefaciens CN-32 sodium:dicarboxylate symporter YP_001182560.1 1152418 R 319224 CDS YP_001182561.1 146292137 5081736 1154052..1154477 1 NC_009438.1 KEGG: she:Shewmr4_2982 hypothetical protein; hypothetical protein 1154477 5081736 Sputcn32_1034 Shewanella putrefaciens CN-32 hypothetical protein YP_001182561.1 1154052 D 319224 CDS YP_001182562.1 146292138 5081737 1154627..1157461 1 NC_009438.1 PFAM: peptidase M16 domain protein; KEGG: she:Shewmr4_2981 peptidase M16 domain protein; peptidase M16 domain-containing protein 1157461 5081737 Sputcn32_1035 Shewanella putrefaciens CN-32 peptidase M16 domain-containing protein YP_001182562.1 1154627 D 319224 CDS YP_001182563.1 146292139 5081738 1157647..1159296 1 NC_009438.1 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 1159296 5081738 Sputcn32_1036 Shewanella putrefaciens CN-32 glutamate--cysteine ligase YP_001182563.1 1157647 D 319224 CDS YP_001182564.1 146292140 5081739 1159314..1159757 1 NC_009438.1 KEGG: shm:Shewmr7_3061 hypothetical protein; hypothetical protein 1159757 5081739 Sputcn32_1037 Shewanella putrefaciens CN-32 hypothetical protein YP_001182564.1 1159314 D 319224 CDS YP_001182565.1 146292141 5081740 1159765..1160382 1 NC_009438.1 KEGG: she:Shewmr4_2978 hypothetical protein; hypothetical protein 1160382 5081740 Sputcn32_1038 Shewanella putrefaciens CN-32 hypothetical protein YP_001182565.1 1159765 D 319224 CDS YP_001182566.1 146292142 5081741 complement(1160475..1161743) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: shm:Shewmr7_3059 diguanylate cyclase with GAF sensor; diguanylate cyclase 1161743 5081741 Sputcn32_1039 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001182566.1 1160475 R 319224 CDS YP_001182567.1 146292143 5081742 complement(1161896..1162993) 1 NC_009438.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1162993 5081742 Sputcn32_1040 Shewanella putrefaciens CN-32 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_001182567.1 1161896 R 319224 CDS YP_001182568.1 146292144 5081743 complement(1162993..1163484) 1 NC_009438.1 KEGG: she:Shewmr4_2975 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1163484 5081743 Sputcn32_1041 Shewanella putrefaciens CN-32 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_001182568.1 1162993 R 319224 CDS YP_001182569.1 146292145 5081744 complement(1163764..1165521) 1 NC_009438.1 putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM 1165521 5081744 Sputcn32_1042 Shewanella putrefaciens CN-32 putative sulfate transporter YchM YP_001182569.1 1163764 R 319224 CDS YP_001182570.1 146292146 5081745 1165724..1167625 1 NC_009438.1 PFAM: von Willebrand factor, type A; KEGG: son:SO3552 von Willebrand factor type A domain protein; von Willebrand factor type A domain-containing protein 1167625 5081745 Sputcn32_1043 Shewanella putrefaciens CN-32 von Willebrand factor type A domain-containing protein YP_001182570.1 1165724 D 319224 CDS YP_001182571.1 146292147 5081746 1167712..1168317 1 NC_009438.1 PFAM: sigma-70 region 2 domain protein; Sigma-70, region 4 type 2; KEGG: shm:Shewmr7_3054 RNA polymerase, sigma-24 subunit, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 1168317 5081746 Sputcn32_1044 Shewanella putrefaciens CN-32 ECF subfamily RNA polymerase sigma-24 factor YP_001182571.1 1167712 D 319224 CDS YP_001182572.1 146292148 5081747 1168310..1169065 1 NC_009438.1 KEGG: she:Shewmr4_2971 hypothetical protein; hypothetical protein 1169065 5081747 Sputcn32_1045 Shewanella putrefaciens CN-32 hypothetical protein YP_001182572.1 1168310 D 319224 CDS YP_001182573.1 146292149 5081748 1169287..1169823 1 NC_009438.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: shm:Shewmr7_3052 hemerythrin HHE cation binding domain protein; hemerythrin HHE cation binding domain-containing protein 1169823 5081748 Sputcn32_1046 Shewanella putrefaciens CN-32 hemerythrin HHE cation binding domain-containing protein YP_001182573.1 1169287 D 319224 CDS YP_001182574.1 146292150 5081749 complement(1169917..1170102) 1 NC_009438.1 KEGG: shm:Shewmr7_3051 hypothetical protein; hypothetical protein 1170102 5081749 Sputcn32_1047 Shewanella putrefaciens CN-32 hypothetical protein YP_001182574.1 1169917 R 319224 CDS YP_001182575.1 146292151 5081750 complement(1170319..1171956) 1 NC_009438.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1171956 pgi 5081750 pgi Shewanella putrefaciens CN-32 glucose-6-phosphate isomerase YP_001182575.1 1170319 R 319224 CDS YP_001182576.1 146292152 5081751 complement(1171977..1172933) 1 NC_009438.1 KEGG: shm:Shewmr7_3049 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B 1172933 5081751 Sputcn32_1049 Shewanella putrefaciens CN-32 transaldolase B YP_001182576.1 1171977 R 319224 CDS YP_001182577.1 146292153 5081752 complement(1173183..1174283) 1 NC_009438.1 PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: son:SO3545 OmpA family protein; OmpA/MotB domain-containing protein 1174283 5081752 Sputcn32_1050 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001182577.1 1173183 R 319224 CDS YP_001182578.1 146292154 5081753 complement(1174537..1176903) 1 NC_009438.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: son:SO3542 putative phosphoketolase; putative phosphoketolase 1176903 5081753 Sputcn32_1051 Shewanella putrefaciens CN-32 putative phosphoketolase YP_001182578.1 1174537 R 319224 CDS YP_001182579.1 146292155 5081754 1177331..1178776 1 NC_009438.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: she:Shewmr4_2964 amino acid carrier protein; amino acid carrier protein 1178776 5081754 Sputcn32_1052 Shewanella putrefaciens CN-32 amino acid carrier protein YP_001182579.1 1177331 D 319224 CDS YP_001182580.1 146292156 5081755 1178906..1179679 1 NC_009438.1 PFAM: protein of unknown function DUF328; KEGG: shm:Shewmr7_3045 protein of unknown function DUF328; hypothetical protein 1179679 5081755 Sputcn32_1053 Shewanella putrefaciens CN-32 hypothetical protein YP_001182580.1 1178906 D 319224 CDS YP_001182581.1 146292157 5081756 complement(1179739..1181148) 1 NC_009438.1 PFAM: peptidase M20; peptidase M28; KEGG: she:Shewmr4_2962 peptidase M28; peptidase M28 1181148 5081756 Sputcn32_1054 Shewanella putrefaciens CN-32 peptidase M28 YP_001182581.1 1179739 R 319224 CDS YP_001182582.1 146292158 5081757 1181284..1181580 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: shm:Shewmr7_3043 transcriptional regulator, ArsR family; regulatory protein ArsR 1181580 5081757 Sputcn32_1055 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001182582.1 1181284 D 319224 CDS YP_001182583.1 146292159 5081758 complement(1181636..1181902) 1 NC_009438.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1181902 rpsT 5081758 rpsT Shewanella putrefaciens CN-32 30S ribosomal protein S20 YP_001182583.1 1181636 R 319224 CDS YP_001182584.1 146292160 5081665 1182155..1183714 1 NC_009438.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: she:Shewmr4_2959 integral membrane protein MviN; integral membrane protein MviN 1183714 5081665 Sputcn32_1057 Shewanella putrefaciens CN-32 integral membrane protein MviN YP_001182584.1 1182155 D 319224 CDS YP_001182585.1 146292161 5081666 1183780..1184715 1 NC_009438.1 KEGG: she:Shewmr4_2958 riboflavin biosynthesis protein RibF; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase / FAD synthetase; riboflavin biosynthesis protein RibF 1184715 5081666 Sputcn32_1058 Shewanella putrefaciens CN-32 riboflavin biosynthesis protein RibF YP_001182585.1 1183780 D 319224 CDS YP_001182586.1 146292162 5081667 1184748..1187570 1 NC_009438.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1187570 ileS 5081667 ileS Shewanella putrefaciens CN-32 isoleucyl-tRNA synthetase YP_001182586.1 1184748 D 319224 CDS YP_001182587.1 146292163 5081668 1187580..1188095 1 NC_009438.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1188095 lspA 5081668 lspA Shewanella putrefaciens CN-32 lipoprotein signal peptidase YP_001182587.1 1187580 D 319224 CDS YP_001182588.1 146292164 5081669 1188092..1188514 1 NC_009438.1 KEGG: shm:Shewmr7_3037 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 1188514 5081669 Sputcn32_1061 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001182588.1 1188092 D 319224 CDS YP_001182589.1 146292165 5081670 1188516..1189472 1 NC_009438.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1189472 ispH 5081670 ispH Shewanella putrefaciens CN-32 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_001182589.1 1188516 D 319224 CDS YP_001182590.1 146292166 5081671 1189689..1190240 1 NC_009438.1 TIGRFAM: type IV pilus modification protein PilV; KEGG: shm:Shewmr7_3035 type IV pilus modification protein PilV; type IV pilus modification protein PilV 1190240 5081671 Sputcn32_1063 Shewanella putrefaciens CN-32 type IV pilus modification protein PilV YP_001182590.1 1189689 D 319224 CDS YP_001182591.1 146292167 5081672 1190241..1191224 1 NC_009438.1 KEGG: shm:Shewmr7_3034 prepilin-type cleavage/methylation-like protein; prepilin-type cleavage/methylation-like protein 1191224 5081672 Sputcn32_1064 Shewanella putrefaciens CN-32 prepilin-type cleavage/methylation-like protein YP_001182591.1 1190241 D 319224 CDS YP_001182592.1 146292168 5081673 1191237..1191671 1 NC_009438.1 KEGG: she:Shewmr4_2951 type IV pilus assembly protein PilX; type IV pilus assembly protein PilX 1191671 5081673 Sputcn32_1065 Shewanella putrefaciens CN-32 type IV pilus assembly protein PilX YP_001182592.1 1191237 D 319224 CDS YP_001182593.1 146292169 5081674 1191676..1195173 1 NC_009438.1 KEGG: she:Shewmr4_2950 type IV pilin biogenesis protein, putative; type IV pilin biogenesis protein 1195173 5081674 Sputcn32_1066 Shewanella putrefaciens CN-32 type IV pilin biogenesis protein YP_001182593.1 1191676 D 319224 CDS YP_001182594.1 146292170 5081675 1195180..1195572 1 NC_009438.1 KEGG: shm:Shewmr7_3031 methylation site containing protein; methylation site containing protein 1195572 5081675 Sputcn32_1067 Shewanella putrefaciens CN-32 methylation site containing protein YP_001182594.1 1195180 D 319224 CDS YP_001182595.1 146292171 5081676 1195569..1195865 1 NC_009438.1 KEGG: she:Shewmr4_2948 hypothetical protein; hypothetical protein 1195865 5081676 Sputcn32_1068 Shewanella putrefaciens CN-32 hypothetical protein YP_001182595.1 1195569 D 319224 CDS YP_001182596.1 146292172 5081677 complement(1195969..1196454) 1 NC_009438.1 KEGG: shm:Shewmr7_3029 methylation site containing protein; methylation site containing protein 1196454 5081677 Sputcn32_1069 Shewanella putrefaciens CN-32 methylation site containing protein YP_001182596.1 1195969 R 319224 CDS YP_001182597.1 146292173 5081678 complement(1196604..1197116) 1 NC_009438.1 KEGG: shm:Shewmr7_3028 methylation site containing protein; methylation site containing protein 1197116 5081678 Sputcn32_1070 Shewanella putrefaciens CN-32 methylation site containing protein YP_001182597.1 1196604 R 319224 CDS YP_001182598.1 146292174 5081679 1197367..1197705 1 NC_009438.1 PFAM: nitrogen regulatory protein P-II; KEGG: shm:Shewmr7_3027 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 1197705 5081679 Sputcn32_1071 Shewanella putrefaciens CN-32 nitrogen regulatory protein P-II YP_001182598.1 1197367 D 319224 CDS YP_001182599.1 146292175 5081680 1197893..1199182 1 NC_009438.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: shm:Shewmr7_3026 NADH dehydrogenase; NADH dehydrogenase 1199182 5081680 Sputcn32_1072 Shewanella putrefaciens CN-32 NADH dehydrogenase YP_001182599.1 1197893 D 319224 CDS YP_001182600.1 146292176 5081681 complement(1199246..1200262) 1 NC_009438.1 PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: shm:Shewmr7_3025 transcriptional regulator, LacI family; regulatory protein, LacI 1200262 5081681 Sputcn32_1073 Shewanella putrefaciens CN-32 regulatory protein, LacI YP_001182600.1 1199246 R 319224 CDS YP_001182601.1 146292177 5081682 1200687..1203305 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_3024 TonB-dependent receptor; TonB-dependent receptor 1203305 5081682 Sputcn32_1074 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001182601.1 1200687 D 319224 CDS YP_001182602.1 146292178 5081683 1203560..1206262 1 NC_009438.1 PFAM: glycoside hydrolase, family 20; Carbohydrate-binding, chitobiase/hexosaminidase-type domain protein; glycoside hydrolase, family 20 domain protein; KEGG: she:Shewmr4_2936 beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 1206262 5081683 Sputcn32_1075 Shewanella putrefaciens CN-32 beta-N-acetylhexosaminidase YP_001182602.1 1203560 D 319224 CDS YP_001182603.1 146292179 5081684 1206463..1207419 1 NC_009438.1 PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: shm:Shewmr7_3017 ATPase, BadF/BadG/BcrA/BcrD type; BadF/BadG/BcrA/BcrD type ATPase 1207419 5081684 Sputcn32_1076 Shewanella putrefaciens CN-32 BadF/BadG/BcrA/BcrD type ATPase YP_001182603.1 1206463 D 319224 CDS YP_001182604.1 146292180 5081685 1207437..1208435 1 NC_009438.1 PFAM: sugar isomerase (SIS); KEGG: shm:Shewmr7_3016 glutamine--fructose-6-phosphate transaminase (isomerizing); glutamine--fructose-6-phosphate transaminase (isomerizing) 1208435 5081685 Sputcn32_1077 Shewanella putrefaciens CN-32 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_001182604.1 1207437 D 319224 CDS YP_001182605.1 146292181 5081686 1208569..1209738 1 NC_009438.1 KEGG: she:Shewmr4_2933 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 1209738 5081686 Sputcn32_1078 Shewanella putrefaciens CN-32 N-acetylglucosamine-6-phosphate deacetylase YP_001182605.1 1208569 D 319224 CDS YP_001182606.1 146292182 5081687 1209895..1211049 1 NC_009438.1 KEGG: she:Shewmr4_2932 hypothetical protein; hypothetical protein 1211049 5081687 Sputcn32_1079 Shewanella putrefaciens CN-32 hypothetical protein YP_001182606.1 1209895 D 319224 CDS YP_001182607.1 146292183 5081688 1211367..1212665 1 NC_009438.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: son:SO3503 glucose/galactose transporter; glucose/galactose transporter 1212665 5081688 Sputcn32_1080 Shewanella putrefaciens CN-32 glucose/galactose transporter YP_001182607.1 1211367 D 319224 CDS YP_001182608.1 146292184 5081689 complement(1212789..1213511) 1 NC_009438.1 KEGG: shm:Shewmr7_3012 hypothetical protein; hypothetical protein 1213511 5081689 Sputcn32_1081 Shewanella putrefaciens CN-32 hypothetical protein YP_001182608.1 1212789 R 319224 CDS YP_001182609.1 146292185 5081690 complement(1213695..1214060) 1 NC_009438.1 PFAM: protein of unknown function DUF861, cupin_3; KEGG: shm:Shewmr7_3011 protein of unknown function DUF861, cupin_3; hypothetical protein 1214060 5081690 Sputcn32_1082 Shewanella putrefaciens CN-32 hypothetical protein YP_001182609.1 1213695 R 319224 CDS YP_001182610.1 146292186 5081691 complement(1214091..1215581) 1 NC_009438.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: she:Shewmr4_2928 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1215581 5081691 Sputcn32_1083 Shewanella putrefaciens CN-32 methylmalonate-semialdehyde dehydrogenase YP_001182610.1 1214091 R 319224 CDS YP_001182611.1 146292187 5081692 complement(1215651..1216988) 1 NC_009438.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1216988 5081692 Sputcn32_1084 Shewanella putrefaciens CN-32 beta alanine--pyruvate transaminase YP_001182611.1 1215651 R 319224 CDS YP_001182612.1 146292188 5081693 1217269..1218765 1 NC_009438.1 PFAM: aldehyde dehydrogenase; KEGG: she:Shewmr4_2926 aldehyde dehydrogenase (NAD(+)); aldehyde dehydrogenase 1218765 5081693 Sputcn32_1085 Shewanella putrefaciens CN-32 aldehyde dehydrogenase YP_001182612.1 1217269 D 319224 CDS YP_001182613.1 146292189 5081694 1219469..1219672 1 NC_009438.1 KEGG: son:SO4411 hypothetical protein; hypothetical protein 1219672 5081694 Sputcn32_1086 Shewanella putrefaciens CN-32 hypothetical protein YP_001182613.1 1219469 D 319224 CDS YP_001182614.1 146292190 5081695 1220859..1221272 1 NC_009438.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: shm:Shewmr7_3007 rare lipoprotein A; rare lipoprotein A 1221272 5081695 Sputcn32_1087 Shewanella putrefaciens CN-32 rare lipoprotein A YP_001182614.1 1220859 D 319224 CDS YP_001182615.1 146292191 5081696 1221466..1222323 1 NC_009438.1 PFAM: Rhodanese domain protein; KEGG: son:SO1261 mercaptopyruvate sulfurtransferase; 3-mercaptopyruvate sulfurtransferase 1222323 5081696 Sputcn32_1088 Shewanella putrefaciens CN-32 3-mercaptopyruvate sulfurtransferase YP_001182615.1 1221466 D 319224 CDS YP_001182616.1 146292192 5081697 1222383..1222892 1 NC_009438.1 KEGG: son:SO1262 hypothetical protein; hypothetical protein 1222892 5081697 Sputcn32_1089 Shewanella putrefaciens CN-32 hypothetical protein YP_001182616.1 1222383 D 319224 CDS YP_001182617.1 146292193 5081698 complement(1223019..1224326) 1 NC_009438.1 PFAM: FAD dependent oxidoreductase; KEGG: son:SO1264 hypothetical oxidoreductase; FAD dependent oxidoreductase 1224326 5081698 Sputcn32_1090 Shewanella putrefaciens CN-32 FAD dependent oxidoreductase YP_001182617.1 1223019 R 319224 CDS YP_001182618.1 146292194 5081699 1224563..1225111 1 NC_009438.1 PFAM: helix-turn-helix domain protein; Cupin 2, conserved barrel domain protein; KEGG: son:SO1265 transcriptional regulator, putative; XRE family transcriptional regulator 1225111 5081699 Sputcn32_1091 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001182618.1 1224563 D 319224 CDS YP_001182619.1 146292195 5081700 1225519..1226280 1 NC_009438.1 PFAM: peptidase C26; KEGG: she:Shewmr4_2920 peptidase C26; peptidase C26 1226280 5081700 Sputcn32_1092 Shewanella putrefaciens CN-32 peptidase C26 YP_001182619.1 1225519 D 319224 CDS YP_001182620.1 146292196 5081701 1226283..1227638 1 NC_009438.1 PFAM: glutamine synthetase, catalytic region; KEGG: she:Shewmr4_2919 glutamate--ammonia ligase; glutamate--ammonia ligase 1227638 5081701 Sputcn32_1093 Shewanella putrefaciens CN-32 glutamate--ammonia ligase YP_001182620.1 1226283 D 319224 CDS YP_001182621.1 146292197 5081702 1228259..1229359 1 NC_009438.1 PFAM: extracellular solute-binding protein, family 1; KEGG: she:Shewmr4_2918 extracellular solute-binding protein, family 1; extracellular solute-binding protein 1229359 5081702 Sputcn32_1094 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001182621.1 1228259 D 319224 CDS YP_001182622.1 146292198 5081703 1229534..1230670 1 NC_009438.1 KEGG: shm:Shewmr7_2999 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1230670 5081703 Sputcn32_1095 Shewanella putrefaciens CN-32 spermidine/putrescine ABC transporter ATPase YP_001182622.1 1229534 D 319224 CDS YP_001182623.1 146292199 5081704 1230667..1231572 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_2998 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1231572 5081704 Sputcn32_1096 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001182623.1 1230667 D 319224 CDS YP_001182624.1 146292200 5081705 1231569..1232384 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_2997 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1232384 5081705 Sputcn32_1097 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001182624.1 1231569 D 319224 CDS YP_001182625.1 146292201 5081706 1232642..1233928 1 NC_009438.1 PFAM: FAD dependent oxidoreductase; KEGG: shm:Shewmr7_2996 FAD dependent oxidoreductase; FAD dependent oxidoreductase 1233928 5081706 Sputcn32_1098 Shewanella putrefaciens CN-32 FAD dependent oxidoreductase YP_001182625.1 1232642 D 319224 CDS YP_001182626.1 146292202 5081707 1233979..1235427 1 NC_009438.1 KEGG: son:SO1275 succinate-semialdehyde dehydrogenase (NADP+); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; succinate-semialdehyde dehydrogenase 1235427 5081707 Sputcn32_1099 Shewanella putrefaciens CN-32 succinate-semialdehyde dehydrogenase YP_001182626.1 1233979 D 319224 CDS YP_001182627.1 146292203 5081708 1235460..1236737 1 NC_009438.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 1236737 5081708 Sputcn32_1100 Shewanella putrefaciens CN-32 4-aminobutyrate aminotransferase YP_001182627.1 1235460 D 319224 CDS YP_001182628.1 146292204 5081709 complement(1236884..1237891) 1 NC_009438.1 PFAM: luciferase family protein; KEGG: she:Shewmr4_2911 luciferase family protein; luciferase family protein 1237891 5081709 Sputcn32_1101 Shewanella putrefaciens CN-32 luciferase family protein YP_001182628.1 1236884 R 319224 CDS YP_001182629.1 146292205 5081710 complement(1238409..1240049) 1 NC_009438.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: shm:Shewmr7_2992 amino acid/peptide transporter; amino acid/peptide transporter 1240049 5081710 Sputcn32_1102 Shewanella putrefaciens CN-32 amino acid/peptide transporter YP_001182629.1 1238409 R 319224 CDS YP_001182630.1 146292206 5081711 1240308..1242428 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_2991 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1242428 5081711 Sputcn32_1103 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182630.1 1240308 D 319224 CDS YP_001182631.1 146292207 5081713 complement(1242929..1244779) 1 NC_009438.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor RpoD domain protein; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70, non-essential domain protein; sigma-70 region 1.2; KEGG: she:Shewmr4_2908 RNA polymerase, sigma 70 subunit, RpoD; RpoD family RNA polymerase sigma factor 1244779 5081713 Sputcn32_1104 Shewanella putrefaciens CN-32 RpoD family RNA polymerase sigma factor YP_001182631.1 1242929 R 319224 CDS YP_001182632.1 146292208 5081615 complement(1244910..1246634) 1 NC_009438.1 KEGG: shm:Shewmr7_2989 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger, CHC2-family protein; TOPRIM domain protein; DNA primase DnaG, DnaB-binding; DNA primase catalytic core, N-terminal domain; SMART: Toprim sub domain protein; DNA primase 1246634 5081615 Sputcn32_1105 Shewanella putrefaciens CN-32 DNA primase YP_001182632.1 1244910 R 319224 CDS YP_001182633.1 146292209 5081616 complement(1246718..1247161) 1 NC_009438.1 PFAM: GatB/Yqey domain protein; KEGG: she:Shewmr4_2906 GatB/YqeY domain protein; GatB/Yqey domain-containing protein 1247161 5081616 Sputcn32_1106 Shewanella putrefaciens CN-32 GatB/Yqey domain-containing protein YP_001182633.1 1246718 R 319224 CDS YP_001182634.1 146292210 5081617 complement(1247168..1247383) 1 NC_009438.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1247383 rpsU 5081617 rpsU Shewanella putrefaciens CN-32 30S ribosomal protein S21 YP_001182634.1 1247168 R 319224 CDS YP_001182635.1 146292211 5081618 1247602..1248618 1 NC_009438.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1248618 5081618 Sputcn32_1108 Shewanella putrefaciens CN-32 putative DNA-binding/iron metalloprotein/AP endonuclease YP_001182635.1 1247602 D 319224 CDS YP_001182636.1 146292212 5081619 complement(1248697..1249308) 1 NC_009438.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 1249308 5081619 Sputcn32_1109 Shewanella putrefaciens CN-32 putative glycerol-3-phosphate acyltransferase PlsY YP_001182636.1 1248697 R 319224 CDS YP_001182637.1 146292213 5081620 1249577..1249927 1 NC_009438.1 TIGRFAM: dihydroneopterin aldolase; KEGG: shm:Shewmr7_2984 dihydroneopterin aldolase; dihydroneopterin aldolase 1249927 5081620 Sputcn32_1110 Shewanella putrefaciens CN-32 dihydroneopterin aldolase YP_001182637.1 1249577 D 319224 CDS YP_001182638.1 146292214 5081621 1250012..1250515 1 NC_009438.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: she:Shewmr4_2901 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1250515 5081621 Sputcn32_1111 Shewanella putrefaciens CN-32 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001182638.1 1250012 D 319224 CDS YP_001182639.1 146292215 5081622 1250534..1251334 1 NC_009438.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 1251334 5081622 Sputcn32_1112 Shewanella putrefaciens CN-32 undecaprenyl pyrophosphate phosphatase YP_001182639.1 1250534 D 319224 CDS YP_001182640.1 146292216 5081623 1251419..1252276 1 NC_009438.1 KEGG: shm:Shewmr7_2981 rRNA (guanine-N(1)-)-methyltransferase; rRNA (guanine-N(1)-)-methyltransferase 1252276 5081623 Sputcn32_1113 Shewanella putrefaciens CN-32 rRNA (guanine-N(1)-)-methyltransferase YP_001182640.1 1251419 D 319224 CDS YP_001182641.1 146292217 5081624 complement(1252482..1252748) 1 NC_009438.1 KEGG: shm:Shewmr7_2980 major outer membrane lipoprotein, putative; major outer membrane lipoprotein 1252748 5081624 Sputcn32_1114 Shewanella putrefaciens CN-32 major outer membrane lipoprotein YP_001182641.1 1252482 R 319224 CDS YP_001182642.1 146292218 5081625 complement(1252995..1254257) 1 NC_009438.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase, HD sub domain; KEGG: shm:Shewmr7_2979 metal dependent phosphohydrolase; metal dependent phosphohydrolase 1254257 5081625 Sputcn32_1115 Shewanella putrefaciens CN-32 metal dependent phosphohydrolase YP_001182642.1 1252995 R 319224 CDS YP_001182643.1 146292219 5081626 1254412..1256091 1 NC_009438.1 PFAM: Peptidoglycan-binding domain 1 protein; SMART: AAA ATPase; KEGG: she:Shewmr4_2896 peptidoglycan-binding domain 1 protein; peptidoglycan binding domain-containing protein 1256091 5081626 Sputcn32_1116 Shewanella putrefaciens CN-32 peptidoglycan binding domain-containing protein YP_001182643.1 1254412 D 319224 CDS YP_001182644.1 146292220 5081627 1256091..1257158 1 NC_009438.1 KEGG: she:Shewmr4_2895 general secretion pathway protein B; general secretion pathway protein B 1257158 5081627 Sputcn32_1117 Shewanella putrefaciens CN-32 general secretion pathway protein B YP_001182644.1 1256091 D 319224 CDS YP_001182645.1 146292221 5081628 complement(1257219..1258466) 1 NC_009438.1 PFAM: Citrate transporter; KEGG: she:Shewmr4_2894 citrate transporter; citrate transporter 1258466 5081628 Sputcn32_1118 Shewanella putrefaciens CN-32 citrate transporter YP_001182645.1 1257219 R 319224 CDS YP_001182646.1 146292222 5081629 complement(1258880..1260172) 1 NC_009438.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1260172 5081629 Sputcn32_1119 Shewanella putrefaciens CN-32 glutamate-1-semialdehyde aminotransferase YP_001182646.1 1258880 R 319224 CDS YP_001182647.1 146292223 5081630 complement(1260199..1261218) 1 NC_009438.1 Catalyzes the conversion of carbamoyl phosphate and l-aspartate to yield orthophosphate and n-carbamoyl-l-aspartate; aspartate carbamoyltransferase 1261218 5081630 Sputcn32_1120 Shewanella putrefaciens CN-32 aspartate carbamoyltransferase YP_001182647.1 1260199 R 319224 CDS YP_001182648.1 146292224 5081631 complement(1261442..1263166) 1 NC_009438.1 PFAM: Cl- channel, voltage-gated family protein; KEGG: shm:Shewmr7_2973 Cl-channel, voltage-gated family protein; Cl- channel voltage-gated family protein 1263166 5081631 Sputcn32_1121 Shewanella putrefaciens CN-32 Cl- channel voltage-gated family protein YP_001182648.1 1261442 R 319224 CDS YP_001182649.1 146292225 5081632 1263240..1264046 1 NC_009438.1 KEGG: she:Shewmr4_2890 hypothetical protein; hypothetical protein 1264046 5081632 Sputcn32_1122 Shewanella putrefaciens CN-32 hypothetical protein YP_001182649.1 1263240 D 319224 CDS YP_001182650.1 146292226 5081633 1264039..1264389 1 NC_009438.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 1264389 5081633 Sputcn32_1123 Shewanella putrefaciens CN-32 iron-sulfur cluster insertion protein ErpA YP_001182650.1 1264039 D 319224 CDS YP_001182651.1 146292227 5081634 complement(1264487..1264930) 1 NC_009438.1 KEGG: she:Shewmr4_2888 hypothetical protein; hypothetical protein 1264930 5081634 Sputcn32_1124 Shewanella putrefaciens CN-32 hypothetical protein YP_001182651.1 1264487 R 319224 CDS YP_001182652.1 146292228 5081635 complement(1264959..1265339) 1 NC_009438.1 KEGG: shm:Shewmr7_2969 hypothetical protein; hypothetical protein 1265339 5081635 Sputcn32_1125 Shewanella putrefaciens CN-32 hypothetical protein YP_001182652.1 1264959 R 319224 CDS YP_001182653.1 146292229 5081636 complement(1265593..1266702) 1 NC_009438.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1266702 anmK 5081636 anmK Shewanella putrefaciens CN-32 anhydro-N-acetylmuramic acid kinase YP_001182653.1 1265593 R 319224 CDS YP_001182654.1 146292230 5081637 complement(1266724..1268130) 1 NC_009438.1 PFAM: peptidase M23B; Opacity-associated protein A, N-terminal domain protein; KEGG: she:Shewmr4_2881 peptidase M23B; peptidase M23B 1268130 5081637 Sputcn32_1127 Shewanella putrefaciens CN-32 peptidase M23B YP_001182654.1 1266724 R 319224 CDS YP_001182655.1 146292231 5081638 1268257..1269450 1 NC_009438.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1269450 5081638 Sputcn32_1128 Shewanella putrefaciens CN-32 tyrosyl-tRNA synthetase YP_001182655.1 1268257 D 319224 CDS YP_001182656.1 146292232 5081639 complement(1269573..1270001) 1 NC_009438.1 KEGG: son:SO1317 hypothetical protein; hypothetical protein 1270001 5081639 Sputcn32_1129 Shewanella putrefaciens CN-32 hypothetical protein YP_001182656.1 1269573 R 319224 CDS YP_001182657.1 146292233 5081640 complement(1270122..1270583) 1 NC_009438.1 KEGG: she:Shewmr4_2878 hypothetical protein; hypothetical protein 1270583 5081640 Sputcn32_1130 Shewanella putrefaciens CN-32 hypothetical protein YP_001182657.1 1270122 R 319224 CDS YP_001182658.1 146292234 5081641 complement(1270615..1271241) 1 NC_009438.1 PFAM: protein of unknown function UPF0126; KEGG: shm:Shewmr7_2959 protein of unknown function UPF0126; hypothetical protein 1271241 5081641 Sputcn32_1131 Shewanella putrefaciens CN-32 hypothetical protein YP_001182658.1 1270615 R 319224 CDS YP_001182659.1 146292235 5081642 complement(1271238..1271615) 1 NC_009438.1 KEGG: shm:Shewmr7_2958 hypothetical protein; hypothetical protein 1271615 5081642 Sputcn32_1132 Shewanella putrefaciens CN-32 hypothetical protein YP_001182659.1 1271238 R 319224 CDS YP_001182660.1 146292236 5081643 complement(1271671..1272660) 1 NC_009438.1 PFAM: cobalamin biosynthesis protein CbiB; KEGG: son:SO1321 CobD-related protein; cobalamin biosynthesis protein CbiB 1272660 5081643 Sputcn32_1133 Shewanella putrefaciens CN-32 cobalamin biosynthesis protein CbiB YP_001182660.1 1271671 R 319224 CDS YP_001182661.1 146292237 5081644 complement(1272698..1273393) 1 NC_009438.1 PFAM: purine and other phosphorylases, family 1; KEGG: she:Shewmr4_2874 methylthioadenosine nucleosidase; adenosylhomocysteine nucleosidase 1273393 5081644 Sputcn32_1134 Shewanella putrefaciens CN-32 adenosylhomocysteine nucleosidase YP_001182661.1 1272698 R 319224 CDS YP_001182662.1 146292238 5081645 complement(1273725..1275131) 1 NC_009438.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1275131 gltD 5081645 gltD Shewanella putrefaciens CN-32 glutamate synthase subunit beta YP_001182662.1 1273725 R 319224 CDS YP_001182663.1 146292239 5081646 complement(1275138..1279586) 1 NC_009438.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 1279586 gltB 5081646 gltB Shewanella putrefaciens CN-32 glutamate synthase subunit alpha YP_001182663.1 1275138 R 319224 CDS YP_001182664.1 146292240 5081647 1280171..1281100 1 NC_009438.1 KEGG: shm:Shewmr7_2952 conserved hypothetical radical SAM protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; putative radical SAM protein 1281100 5081647 Sputcn32_1137 Shewanella putrefaciens CN-32 putative radical SAM protein YP_001182664.1 1280171 D 319224 CDS YP_001182665.1 146292241 5081648 1281291..1281656 1 NC_009438.1 PFAM: Hpt domain protein; KEGG: shm:Shewmr7_2951 Hpt protein; Hpt protein 1281656 5081648 Sputcn32_1138 Shewanella putrefaciens CN-32 Hpt protein YP_001182665.1 1281291 D 319224 CDS YP_001182666.1 146292242 5081649 1282022..1282933 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_2950 transcriptional regulator, LysR family; LysR family transcriptional regulator 1282933 5081649 Sputcn32_1139 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001182666.1 1282022 D 319224 CDS YP_001182667.1 146292243 5081650 complement(1282988..1284055) 1 NC_009438.1 KEGG: shm:Shewmr7_2949 putative adenylate/guanylate cyclase; putative adenylate/guanylate cyclase 1284055 5081650 Sputcn32_1140 Shewanella putrefaciens CN-32 putative adenylate/guanylate cyclase YP_001182667.1 1282988 R 319224 CDS YP_001182668.1 146292244 5081651 complement(1284178..1284849) 1 NC_009438.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 1284849 5081651 Sputcn32_1141 Shewanella putrefaciens CN-32 DNA mismatch repair protein YP_001182668.1 1284178 R 319224 CDS YP_001182669.1 146292245 5081652 1285537..1286061 1 NC_009438.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1286061 5081652 Sputcn32_1142 Shewanella putrefaciens CN-32 dinucleoside polyphosphate hydrolase YP_001182669.1 1285537 D 319224 CDS YP_001182670.1 146292246 5081653 1286084..1288318 1 NC_009438.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; GAF domain protein; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: she:Shewmr4_2864 PTSINtr with GAF domain, PtsP; phosphoenolpyruvate-protein phosphotransferase PtsP 1288318 5081653 Sputcn32_1143 Shewanella putrefaciens CN-32 phosphoenolpyruvate-protein phosphotransferase PtsP YP_001182670.1 1286084 D 319224 CDS YP_001182671.1 146292247 5081654 1288377..1289177 1 NC_009438.1 PFAM: protein of unknown function DUF81; KEGG: son:SO1333 hypothetical protein; hypothetical protein 1289177 5081654 Sputcn32_1144 Shewanella putrefaciens CN-32 hypothetical protein YP_001182671.1 1288377 D 319224 CDS YP_001182672.1 146292248 5081655 1289217..1290023 1 NC_009438.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1290023 5081655 Sputcn32_1145 Shewanella putrefaciens CN-32 prolipoprotein diacylglyceryl transferase YP_001182672.1 1289217 D 319224 CDS YP_001182673.1 146292249 5081656 1290023..1290817 1 NC_009438.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1290817 thyA 5081656 thyA Shewanella putrefaciens CN-32 thymidylate synthase YP_001182673.1 1290023 D 319224 CDS YP_001182674.1 146292250 5081657 1290934..1292109 1 NC_009438.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1292109 nhaA 5081657 nhaA Shewanella putrefaciens CN-32 pH-dependent sodium/proton antiporter YP_001182674.1 1290934 D 319224 CDS YP_001182675.1 146292251 5081658 1292106..1292492 1 NC_009438.1 KEGG: son:SO1337 hypothetical protein; hypothetical protein 1292492 5081658 Sputcn32_1148 Shewanella putrefaciens CN-32 hypothetical protein YP_001182675.1 1292106 D 319224 CDS YP_001182676.1 146292252 5081659 1292600..1293508 1 NC_009438.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 1293508 nhaR 5081659 nhaR Shewanella putrefaciens CN-32 transcriptional activator NhaR YP_001182676.1 1292600 D 319224 CDS YP_001182677.1 146292253 5081660 1293603..1293842 1 NC_009438.1 PFAM: protein of unknown function DUF339; KEGG: shm:Shewmr7_2939 protein of unknown function DUF339; hypothetical protein 1293842 5081660 Sputcn32_1150 Shewanella putrefaciens CN-32 hypothetical protein YP_001182677.1 1293603 D 319224 CDS YP_001182678.1 146292254 5081661 1293892..1294263 1 NC_009438.1 KEGG: son:SO1340 hypothetical protein; hypothetical protein 1294263 5081661 Sputcn32_1151 Shewanella putrefaciens CN-32 hypothetical protein YP_001182678.1 1293892 D 319224 CDS YP_001182679.1 146292255 5081662 complement(1294300..1295913) 1 NC_009438.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 1295913 5081662 Sputcn32_1152 Shewanella putrefaciens CN-32 L-aspartate oxidase YP_001182679.1 1294300 R 319224 CDS YP_001182680.1 146292256 5081663 1296103..1296681 1 NC_009438.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1296681 5081663 Sputcn32_1153 Shewanella putrefaciens CN-32 RNA polymerase sigma factor RpoE YP_001182680.1 1296103 D 319224 CDS YP_001182681.1 146292257 5081664 1296708..1297328 1 NC_009438.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: she:Shewmr4_2853 anti sigma-E protein, RseA; anti sigma-E protein, RseA 1297328 5081664 Sputcn32_1154 Shewanella putrefaciens CN-32 anti sigma-E protein, RseA YP_001182681.1 1296708 D 319224 CDS YP_001182682.1 146292258 5081565 1297341..1298273 1 NC_009438.1 PFAM: MucB/RseB family protein; KEGG: son:SO1344 sigma-E factor regulatory protein RseB; sigma E regulatory protein MucB/RseB 1298273 5081565 Sputcn32_1155 Shewanella putrefaciens CN-32 sigma E regulatory protein MucB/RseB YP_001182682.1 1297341 D 319224 CDS YP_001182683.1 146292259 5081566 1298284..1298757 1 NC_009438.1 PFAM: Positive regulator of sigma(E), RseC/MucC; KEGG: she:Shewmr4_2851 positive regulator of sigma E, RseC/MucC; sigma E positive regulator RseC/MucC 1298757 5081566 Sputcn32_1156 Shewanella putrefaciens CN-32 sigma E positive regulator RseC/MucC YP_001182683.1 1298284 D 319224 CDS YP_001182684.1 146292260 5081567 1298924..1300714 1 NC_009438.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1300714 5081567 Sputcn32_1157 Shewanella putrefaciens CN-32 GTP-binding protein LepA YP_001182684.1 1298924 D 319224 CDS YP_001182685.1 146292261 5081568 1300887..1301804 1 NC_009438.1 KEGG: shm:Shewmr7_2931 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24, S26A and S26B; signal peptidase I 1301804 5081568 Sputcn32_1158 Shewanella putrefaciens CN-32 signal peptidase I YP_001182685.1 1300887 D 319224 CDS YP_001182686.1 146292262 5081569 1301806..1302486 1 NC_009438.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1302486 rnc 5081569 rnc Shewanella putrefaciens CN-32 ribonuclease III YP_001182686.1 1301806 D 319224 CDS YP_001182687.1 146292263 5081570 1302483..1303499 1 NC_009438.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1303499 era 5081570 era Shewanella putrefaciens CN-32 GTP-binding protein Era YP_001182687.1 1302483 D 319224 CDS YP_001182688.1 146292264 5081571 1303527..1304237 1 NC_009438.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O, RecO; KEGG: son:SO1350 DNA repair protein RecO; DNA repair protein RecO 1304237 5081571 Sputcn32_1161 Shewanella putrefaciens CN-32 DNA repair protein RecO YP_001182688.1 1303527 D 319224 CDS YP_001182689.1 146292265 5081572 1304329..1305066 1 NC_009438.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1305066 5081572 Sputcn32_1162 Shewanella putrefaciens CN-32 pyridoxine 5'-phosphate synthase YP_001182689.1 1304329 D 319224 CDS YP_001182690.1 146292266 5081573 1305066..1305449 1 NC_009438.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1305449 acpS 5081573 acpS Shewanella putrefaciens CN-32 4'-phosphopantetheinyl transferase YP_001182690.1 1305066 D 319224 CDS YP_001182691.1 146292267 5081574 1305637..1306161 1 NC_009438.1 PFAM: protein of unknown function DUF962; KEGG: shm:Shewmr7_2925 protein of unknown function DUF962; hypothetical protein 1306161 5081574 Sputcn32_1164 Shewanella putrefaciens CN-32 hypothetical protein YP_001182691.1 1305637 D 319224 CDS YP_001182692.1 146292268 5081575 complement(1306226..1307497) 1 NC_009438.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: she:Shewmr4_2841 protein of unknown function DUF21; hypothetical protein 1307497 5081575 Sputcn32_1165 Shewanella putrefaciens CN-32 hypothetical protein YP_001182692.1 1306226 R 319224 CDS YP_001182693.1 146292269 5081576 complement(1307598..1308386) 1 NC_009438.1 PFAM: cytochrome c assembly protein; KEGG: shm:Shewmr7_2922 cytochrome c assembly protein; cytochrome c assembly protein 1308386 5081576 Sputcn32_1166 Shewanella putrefaciens CN-32 cytochrome c assembly protein YP_001182693.1 1307598 R 319224 CDS YP_001182694.1 146292270 5081577 1308715..1310088 1 NC_009438.1 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 1310088 5081577 Sputcn32_1167 Shewanella putrefaciens CN-32 signal recognition particle protein YP_001182694.1 1308715 D 319224 CDS YP_001182695.1 146292271 5081578 1310307..1310558 1 NC_009438.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1310558 rpsP 5081578 rpsP Shewanella putrefaciens CN-32 30S ribosomal protein S16 YP_001182695.1 1310307 D 319224 CDS YP_001182696.1 146292272 5081579 1310579..1311109 1 NC_009438.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1311109 rimM 5081579 rimM Shewanella putrefaciens CN-32 16S rRNA-processing protein RimM YP_001182696.1 1310579 D 319224 CDS YP_001182697.1 146292273 5081580 1311125..1311871 1 NC_009438.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1311871 trmD 5081580 trmD Shewanella putrefaciens CN-32 tRNA (guanine-N(1)-)-methyltransferase YP_001182697.1 1311125 D 319224 CDS YP_001182698.1 146292274 5081581 1311906..1312259 1 NC_009438.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1312259 rplS 5081581 rplS Shewanella putrefaciens CN-32 50S ribosomal protein L19 YP_001182698.1 1311906 D 319224 CDS YP_001182699.1 146292275 5081582 1312512..1313603 1 NC_009438.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1313603 5081582 Sputcn32_1172 Shewanella putrefaciens CN-32 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001182699.1 1312512 D 319224 CDS YP_001182700.1 146292276 5081583 1313619..1314770 1 NC_009438.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1314770 tyrA 5081583 tyrA Shewanella putrefaciens CN-32 bifunctional chorismate mutase/prephenate dehydrogenase YP_001182700.1 1313619 D 319224 CDS YP_001182701.1 146292277 5081584 1314988..1316652 1 NC_009438.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1316652 5081584 Sputcn32_1174 Shewanella putrefaciens CN-32 hydroxylamine reductase YP_001182701.1 1314988 D 319224 CDS YP_001182702.1 146292278 5081585 1316729..1317844 1 NC_009438.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: shm:Shewmr7_2913 oxidoreductase FAD-binding domain protein; oxidoreductase FAD-binding subunit 1317844 5081585 Sputcn32_1175 Shewanella putrefaciens CN-32 oxidoreductase FAD-binding subunit YP_001182702.1 1316729 D 319224 CDS YP_001182703.1 146292279 5081586 1317986..1318321 1 NC_009438.1 KEGG: she:Shewmr4_2830 hypothetical protein; hypothetical protein 1318321 5081586 Sputcn32_1176 Shewanella putrefaciens CN-32 hypothetical protein YP_001182703.1 1317986 D 319224 CDS YP_001182704.1 146292280 5081587 complement(1318450..1320429) 1 NC_009438.1 TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase; KEGG: she:Shewmr4_2828 chorismate mutase; chorismate mutase 1320429 5081587 Sputcn32_1177 Shewanella putrefaciens CN-32 chorismate mutase YP_001182704.1 1318450 R 319224 CDS YP_001182705.1 146292281 5081588 complement(1320779..1322287) 1 NC_009438.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1322287 5081588 Sputcn32_1178 Shewanella putrefaciens CN-32 leucyl aminopeptidase YP_001182705.1 1320779 R 319224 CDS YP_001182706.1 146292282 5081589 1322544..1323656 1 NC_009438.1 PFAM: permease YjgP/YjgQ family protein; KEGG: she:Shewmr4_2826 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1323656 5081589 Sputcn32_1179 Shewanella putrefaciens CN-32 YjgP/YjgQ family permease YP_001182706.1 1322544 D 319224 CDS YP_001182707.1 146292283 5081590 1323653..1324711 1 NC_009438.1 PFAM: permease YjgP/YjgQ family protein; KEGG: shm:Shewmr7_2907 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 1324711 5081590 Sputcn32_1180 Shewanella putrefaciens CN-32 YjgP/YjgQ family permease YP_001182707.1 1323653 D 319224 CDS YP_001182708.1 146292284 5081591 complement(1324787..1325296) 1 NC_009438.1 PFAM: RDD domain containing protein; KEGG: she:Shewmr4_2823 RDD domain containing protein; RDD domain-containing protein 1325296 5081591 Sputcn32_1181 Shewanella putrefaciens CN-32 RDD domain-containing protein YP_001182708.1 1324787 R 319224 CDS YP_001182709.1 146292285 5081592 complement(1325343..1325600) 1 NC_009438.1 KEGG: shm:Shewmr7_2905 hypothetical protein; hypothetical protein 1325600 5081592 Sputcn32_1182 Shewanella putrefaciens CN-32 hypothetical protein YP_001182709.1 1325343 R 319224 CDS YP_001182710.1 146292286 5081593 complement(1325619..1325969) 1 NC_009438.1 PFAM: protein of unknown function DUF486; KEGG: she:Shewmr4_2821 protein of unknown function DUF486; hypothetical protein 1325969 5081593 Sputcn32_1183 Shewanella putrefaciens CN-32 hypothetical protein YP_001182710.1 1325619 R 319224 CDS YP_001182711.1 146292287 5081594 complement(1325972..1326463) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1374 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1326463 5081594 Sputcn32_1184 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182711.1 1325972 R 319224 CDS YP_001182712.1 146292288 5081595 1326852..1327484 1 NC_009438.1 PFAM: protein of unknown function DUF1449; KEGG: shm:Shewmr7_2900 protein of unknown function DUF1449; hypothetical protein 1327484 5081595 Sputcn32_1185 Shewanella putrefaciens CN-32 hypothetical protein YP_001182712.1 1326852 D 319224 CDS YP_001182713.1 146292289 5081596 1327521..1329293 1 NC_009438.1 PFAM: band 7 protein; KEGG: son:SO1377 hypothetical protein; hypothetical protein 1329293 5081596 Sputcn32_1186 Shewanella putrefaciens CN-32 hypothetical protein YP_001182713.1 1327521 D 319224 CDS YP_001182714.1 146292290 5081597 complement(1329431..1331767) 1 NC_009438.1 KEGG: shm:Shewmr7_2577 decaheme cytochrome c; hypothetical protein 1331767 5081597 Sputcn32_1187 Shewanella putrefaciens CN-32 hypothetical protein YP_001182714.1 1329431 R 319224 CDS YP_001182715.1 146292291 5081598 1332117..1332761 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: sbo:SBO_1458 putative oxidoreductase, Fe-S subunit; 4Fe-4S ferredoxin 1332761 5081598 Sputcn32_1188 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001182715.1 1332117 D 319224 CDS YP_001182716.1 146292292 5081599 1332778..1334901 1 NC_009438.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase-like; KEGG: ecj:JW5272 predicted oxidoreductase; putative oxidoreductase 1334901 5081599 Sputcn32_1189 Shewanella putrefaciens CN-32 putative oxidoreductase YP_001182716.1 1332778 D 319224 CDS YP_001182717.1 146292293 5081600 1334920..1335441 1 NC_009438.1 hypothetical protein 1335441 5081600 Sputcn32_1190 Shewanella putrefaciens CN-32 hypothetical protein YP_001182717.1 1334920 D 319224 CDS YP_001182718.1 146292294 5081601 1335618..1336181 1 NC_009438.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: son:SO1378 ThiJ/PfpI family protein; PfpI family intracellular peptidase 1336181 5081601 Sputcn32_1191 Shewanella putrefaciens CN-32 PfpI family intracellular peptidase YP_001182718.1 1335618 D 319224 CDS YP_001182719.1 146292295 5081602 1336347..1336664 1 NC_009438.1 KEGG: son:SO1379 hypothetical protein; hypothetical protein 1336664 5081602 Sputcn32_1192 Shewanella putrefaciens CN-32 hypothetical protein YP_001182719.1 1336347 D 319224 CDS YP_001182720.1 146292296 5081603 complement(1336763..1337398) 1 NC_009438.1 KEGG: shm:Shewmr7_2895 hypothetical protein; hypothetical protein 1337398 5081603 Sputcn32_1193 Shewanella putrefaciens CN-32 hypothetical protein YP_001182720.1 1336763 R 319224 CDS YP_001182721.1 146292297 5081604 1337613..1338503 1 NC_009438.1 KEGG: shm:Shewmr7_2893 hypothetical protein; hypothetical protein 1338503 5081604 Sputcn32_1194 Shewanella putrefaciens CN-32 hypothetical protein YP_001182721.1 1337613 D 319224 CDS YP_001182722.1 146292298 5081605 complement(1338622..1339923) 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: shm:Shewmr7_2892 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1339923 5081605 Sputcn32_1195 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001182722.1 1338622 R 319224 CDS YP_001182723.1 146292299 5081606 complement(1340248..1341816) 1 NC_009438.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: shm:Shewmr7_2891 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer 1341816 5081606 Sputcn32_1196 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182723.1 1340248 R 319224 CDS YP_001182724.1 146292300 5081607 1342379..1342573 1 NC_009438.1 KEGG: son:SO1387 HD domain protein; hypothetical protein 1342573 5081607 Sputcn32_1197 Shewanella putrefaciens CN-32 hypothetical protein YP_001182724.1 1342379 D 319224 CDS YP_001182725.1 146292301 5081608 complement(1342715..1344502) 1 NC_009438.1 PFAM: peptidase M24; KEGG: shm:Shewmr7_2890 peptidase M24; peptidase M24 1344502 5081608 Sputcn32_1198 Shewanella putrefaciens CN-32 peptidase M24 YP_001182725.1 1342715 R 319224 CDS YP_001182726.1 146292302 5081609 1344868..1345653 1 NC_009438.1 PFAM: ROK family protein; KEGG: son:SO1389 ROK family protein; ROK family protein 1345653 5081609 Sputcn32_1199 Shewanella putrefaciens CN-32 ROK family protein YP_001182726.1 1344868 D 319224 CDS YP_001182727.1 146292303 5081610 complement(1345724..1346194) 1 NC_009438.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1390 peptidyl-prolyl cis-trans isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 1346194 5081610 Sputcn32_1200 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001182727.1 1345724 R 319224 CDS YP_001182728.1 146292304 5081611 1346436..1347779 1 NC_009438.1 PFAM: short chain fatty acid transporter; KEGG: shm:Shewmr7_2886 short chain fatty acid transporter; short chain fatty acid transporter 1347779 5081611 Sputcn32_1201 Shewanella putrefaciens CN-32 short chain fatty acid transporter YP_001182728.1 1346436 D 319224 CDS YP_001182729.1 146292305 5081612 complement(1347860..1348288) 1 NC_009438.1 PFAM: protein of unknown function DUF1294; KEGG: son:SO1395 membrane protein,putative; hypothetical protein 1348288 5081612 Sputcn32_1202 Shewanella putrefaciens CN-32 hypothetical protein YP_001182729.1 1347860 R 319224 CDS YP_001182730.1 146292306 5081613 complement(1348316..1349512) 1 NC_009438.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: son:SO1396 hypothetical protein; hypothetical protein 1349512 5081613 Sputcn32_1203 Shewanella putrefaciens CN-32 hypothetical protein YP_001182730.1 1348316 R 319224 CDS YP_001182731.1 146292307 5081614 complement(1349662..1350099) 1 NC_009438.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: son:SO1397 cytosine deaminase; cytosine deaminase 1350099 5081614 Sputcn32_1204 Shewanella putrefaciens CN-32 cytosine deaminase YP_001182731.1 1349662 R 319224 CDS YP_001182732.1 146292308 5081516 complement(1350234..1350725) 1 NC_009438.1 KEGG: shm:Shewmr7_2880 hypothetical protein; hypothetical protein 1350725 5081516 Sputcn32_1205 Shewanella putrefaciens CN-32 hypothetical protein YP_001182732.1 1350234 R 319224 CDS YP_001182733.1 146292309 5081517 1350963..1351877 1 NC_009438.1 PFAM: protein of unknown function DUF368; KEGG: shm:Shewmr7_2879 protein of unknown function DUF368; hypothetical protein 1351877 5081517 Sputcn32_1206 Shewanella putrefaciens CN-32 hypothetical protein YP_001182733.1 1350963 D 319224 CDS YP_001182734.1 146292310 5081518 1352106..1353707 1 NC_009438.1 KEGG: shm:Shewmr7_2878 hypothetical protein; hypothetical protein 1353707 5081518 Sputcn32_1207 Shewanella putrefaciens CN-32 hypothetical protein YP_001182734.1 1352106 D 319224 CDS YP_001182735.1 146292311 5081519 complement(1353761..1354444) 1 NC_009438.1 PFAM: YheO domain protein; KEGG: son:SO1402 hypothetical protein; YheO domain-containing protein 1354444 5081519 Sputcn32_1208 Shewanella putrefaciens CN-32 YheO domain-containing protein YP_001182735.1 1353761 R 319224 CDS YP_001182736.1 146292312 5081520 complement(1354492..1355766) 1 NC_009438.1 PFAM: protein of unknown function DUF1063; KEGG: shm:Shewmr7_2876 protein of unknown function DUF1063; hypothetical protein 1355766 5081520 Sputcn32_1209 Shewanella putrefaciens CN-32 hypothetical protein YP_001182736.1 1354492 R 319224 CDS YP_001182737.1 146292313 5081521 1356001..1356309 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: dps:DP0944 similar to ArsR-family transcription regulator; regulatory protein ArsR 1356309 5081521 Sputcn32_1210 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001182737.1 1356001 D 319224 CDS YP_001182738.1 146292314 5081522 1356370..1356612 1 NC_009438.1 TIGRFAM: redox-active disulfide protein 2; KEGG: plt:Plut_1705 redox-active disulfide protein 2; redox-active disulfide protein 2 1356612 5081522 Sputcn32_1211 Shewanella putrefaciens CN-32 redox-active disulfide protein 2 YP_001182738.1 1356370 D 319224 CDS YP_001182739.1 146292315 5081523 1356631..1357119 1 NC_009438.1 KEGG: mhu:Mhun_0869 hypothetical protein; hypothetical protein 1357119 5081523 Sputcn32_1212 Shewanella putrefaciens CN-32 hypothetical protein YP_001182739.1 1356631 D 319224 CDS YP_001182740.1 146292316 5081524 1357112..1357816 1 NC_009438.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: bth:BT0800 hypothetical protein; cytochrome c biogenesis protein, transmembrane region 1357816 5081524 Sputcn32_1213 Shewanella putrefaciens CN-32 cytochrome c biogenesis protein, transmembrane region YP_001182740.1 1357112 D 319224 CDS YP_001182741.1 146292317 5081525 complement(1357900..1358355) 1 NC_009438.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sbo:SBO_3501 arsenate reductase; arsenate reductase 1358355 5081525 Sputcn32_1214 Shewanella putrefaciens CN-32 arsenate reductase YP_001182741.1 1357900 R 319224 CDS YP_001182742.1 146292318 5081526 complement(1358436..1359719) 1 NC_009438.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sbo:SBO_3500 arsenical pump membrane protein; arsenical pump membrane protein 1359719 5081526 Sputcn32_1215 Shewanella putrefaciens CN-32 arsenical pump membrane protein YP_001182742.1 1358436 R 319224 CDS YP_001182743.1 146292319 5081527 complement(1359922..1361349) 1 NC_009438.1 PFAM: glutathione synthase, ATP-binding; KEGG: vfi:VF0976 glutathione synthetase; glutathione synthase 1361349 5081527 Sputcn32_1216 Shewanella putrefaciens CN-32 glutathione synthase YP_001182743.1 1359922 R 319224 CDS YP_001182744.1 146292320 5081528 complement(1361526..1362524) 1 NC_009438.1 PFAM: permease; KEGG: son:SO0503 hypothetical protein; permease 1362524 5081528 Sputcn32_1217 Shewanella putrefaciens CN-32 permease YP_001182744.1 1361526 R 319224 CDS YP_001182745.1 146292321 5081529 1362748..1363050 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: son:SO0502 transcriptional regulator, ArsR family; regulatory protein ArsR 1363050 5081529 Sputcn32_1218 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001182745.1 1362748 D 319224 CDS YP_001182746.1 146292322 5081530 1363148..1363564 1 NC_009438.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sfr:Sfri_4004 transcriptional regulator, ArsR family protein; protein tyrosine phosphatase 1363564 5081530 Sputcn32_1219 Shewanella putrefaciens CN-32 protein tyrosine phosphatase YP_001182746.1 1363148 D 319224 CDS YP_001182747.1 146292323 5081531 1363557..1363904 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: son:SO0532 arsenical resistence operon repressor; regulatory protein ArsR 1363904 5081531 Sputcn32_1220 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001182747.1 1363557 D 319224 CDS YP_001182748.1 146292324 5081532 1363996..1364994 1 NC_009438.1 PFAM: permease; KEGG: sfr:Sfri_1725 permease; permease 1364994 5081532 Sputcn32_1221 Shewanella putrefaciens CN-32 permease YP_001182748.1 1363996 D 319224 CDS YP_001182749.1 146292325 5081533 1365007..1365243 1 NC_009438.1 KEGG: cps:CPS_3356 redox-active disulfide protein 2; redox-active disulfide protein 2 1365243 5081533 Sputcn32_1222 Shewanella putrefaciens CN-32 redox-active disulfide protein 2 YP_001182749.1 1365007 D 319224 CDS YP_001182750.1 146292326 5081534 1365382..1366392 1 NC_009438.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 1366392 5081534 Sputcn32_1223 Shewanella putrefaciens CN-32 glyceraldehyde-3-phosphate dehydrogenase YP_001182750.1 1365382 D 319224 CDS YP_001182751.1 146292327 5081535 1366398..1367636 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfr:Sfri_4001 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1367636 5081535 Sputcn32_1224 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001182751.1 1366398 D 319224 CDS YP_001182752.1 146292328 5081536 1367768..1368043 1 NC_009438.1 KEGG: hch:HCH_00506 hypothetical protein; hypothetical protein 1368043 5081536 Sputcn32_1225 Shewanella putrefaciens CN-32 hypothetical protein YP_001182752.1 1367768 D 319224 CDS YP_001182753.1 146292329 5081537 1368484..1369974 1 NC_009438.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sfr:Sfri_0790 sulphate transporter; sulfate transporter 1369974 5081537 Sputcn32_1226 Shewanella putrefaciens CN-32 sulfate transporter YP_001182753.1 1368484 D 319224 CDS YP_001182754.1 146292330 5081538 1370008..1370862 1 NC_009438.1 PFAM: UspA domain protein; KEGG: sfr:Sfri_0791 UspA domain protein; UspA domain-containing protein 1370862 5081538 Sputcn32_1227 Shewanella putrefaciens CN-32 UspA domain-containing protein YP_001182754.1 1370008 D 319224 CDS YP_001182755.1 146292331 5081539 complement(1370901..1371173) 1 NC_009438.1 hypothetical protein 1371173 5081539 Sputcn32_1228 Shewanella putrefaciens CN-32 hypothetical protein YP_001182755.1 1370901 R 319224 CDS YP_001182756.1 146292332 5081541 complement(1371649..1372140) 1 NC_009438.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1372140 smpB 5081541 smpB Shewanella putrefaciens CN-32 SsrA-binding protein YP_001182756.1 1371649 R 319224 CDS YP_001182757.1 146292333 5081542 1372415..1372852 1 NC_009438.1 PFAM: cyclase/dehydrase; KEGG: shm:Shewmr7_2853 cyclase/dehydrase; cyclase/dehydrase 1372852 5081542 Sputcn32_1230 Shewanella putrefaciens CN-32 cyclase/dehydrase YP_001182757.1 1372415 D 319224 CDS YP_001182758.1 146292334 5081543 1372842..1373174 1 NC_009438.1 PFAM: protein of unknown function UPF0125; KEGG: shm:Shewmr7_2852 protein of unknown function UPF0125; hypothetical protein 1373174 5081543 Sputcn32_1231 Shewanella putrefaciens CN-32 hypothetical protein YP_001182758.1 1372842 D 319224 CDS YP_001182759.1 146292335 5081544 complement(1373253..1373777) 1 NC_009438.1 PFAM: SmpA/OmlA domain protein; KEGG: shm:Shewmr7_2851 SmpA/OmlA domain protein; SmpA/OmlA domain-containing protein 1373777 5081544 Sputcn32_1232 Shewanella putrefaciens CN-32 SmpA/OmlA domain-containing protein YP_001182759.1 1373253 R 319224 CDS YP_001182760.1 146292336 5081545 1374352..1375143 1 NC_009438.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: she:Shewmr4_2772 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole methyltransferase 1375143 5081545 Sputcn32_1233 Shewanella putrefaciens CN-32 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001182760.1 1374352 D 319224 CDS YP_001182761.1 146292337 5081546 1375189..1375401 1 NC_009438.1 KEGG: shm:Shewmr7_2849 hypothetical protein; hypothetical protein 1375401 5081546 Sputcn32_1234 Shewanella putrefaciens CN-32 hypothetical protein YP_001182761.1 1375189 D 319224 CDS YP_001182762.1 146292338 5081547 1375465..1377198 1 NC_009438.1 KEGG: she:Shewmr4_2770 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: Tetratricopeptide domain protein; diguanylate cyclase 1377198 5081547 Sputcn32_1235 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001182762.1 1375465 D 319224 CDS YP_001182763.1 146292339 5081548 1377460..1379229 1 NC_009438.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: shm:Shewmr7_2847 potassium efflux system protein; potassium efflux system protein 1379229 5081548 Sputcn32_1236 Shewanella putrefaciens CN-32 potassium efflux system protein YP_001182763.1 1377460 D 319224 CDS YP_001182764.1 146292340 5081549 complement(1379302..1381746) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1482 TonB-dependent receptor, putative; TonB-dependent receptor, plug 1381746 5081549 Sputcn32_1237 Shewanella putrefaciens CN-32 TonB-dependent receptor, plug YP_001182764.1 1379302 R 319224 CDS YP_001182765.1 146292341 5081550 1382530..1384257 1 NC_009438.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 1384257 5081550 Sputcn32_1238 Shewanella putrefaciens CN-32 malate synthase YP_001182765.1 1382530 D 319224 CDS YP_001182766.1 146292342 5081551 1384392..1385714 1 NC_009438.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: son:SO1484 isocitrate lyase; isocitrate lyase 1385714 5081551 Sputcn32_1239 Shewanella putrefaciens CN-32 isocitrate lyase YP_001182766.1 1384392 D 319224 CDS YP_001182767.1 146292343 5081552 1386107..1386475 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_2843 thioesterase superfamily protein; thioesterase superfamily protein 1386475 5081552 Sputcn32_1240 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001182767.1 1386107 D 319224 CDS YP_001182768.1 146292344 5081553 complement(1386543..1386764) 1 NC_009438.1 KEGG: son:SO1487 hypothetical protein; hypothetical protein 1386764 5081553 Sputcn32_1241 Shewanella putrefaciens CN-32 hypothetical protein YP_001182768.1 1386543 R 319224 CDS YP_001182769.1 146292345 5081554 complement(1386855..1388153) 1 NC_009438.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfr:Sfri_3431 NADH dehydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1388153 5081554 Sputcn32_1242 Shewanella putrefaciens CN-32 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_001182769.1 1386855 R 319224 CDS YP_001182770.1 146292346 5081555 complement(1388531..1388902) 1 NC_009438.1 KEGG: shm:Shewmr7_2841 hypothetical protein; hypothetical protein 1388902 5081555 Sputcn32_1243 Shewanella putrefaciens CN-32 hypothetical protein YP_001182770.1 1388531 R 319224 CDS YP_001182771.1 146292347 5081556 complement(1389665..1390813) 1 NC_009438.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: son:SO1490 alcohol dehydrogenase II; iron-containing alcohol dehydrogenase 1390813 5081556 Sputcn32_1244 Shewanella putrefaciens CN-32 iron-containing alcohol dehydrogenase YP_001182771.1 1389665 R 319224 CDS YP_001182772.1 146292348 5081557 1391151..1391627 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: she:Shewmr4_2761 transcriptional regulator, MarR family; MarR family transcriptional regulator 1391627 5081557 Sputcn32_1245 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001182772.1 1391151 D 319224 CDS YP_001182773.1 146292349 5081558 complement(1391723..1392355) 1 NC_009438.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: shm:Shewmr7_2838 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 1392355 5081558 Sputcn32_1246 Shewanella putrefaciens CN-32 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001182773.1 1391723 R 319224 CDS YP_001182774.1 146292350 5081559 1392868..1395105 1 NC_009438.1 KEGG: shm:Shewmr7_2837 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase, family 77; 4-alpha-glucanotransferase 1395105 5081559 Sputcn32_1247 Shewanella putrefaciens CN-32 4-alpha-glucanotransferase YP_001182774.1 1392868 D 319224 CDS YP_001182775.1 146292351 5081560 1395170..1397407 1 NC_009438.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1397407 5081560 Sputcn32_1248 Shewanella putrefaciens CN-32 glycogen branching protein YP_001182775.1 1395170 D 319224 CDS YP_001182776.1 146292352 5081561 1397404..1399611 1 NC_009438.1 KEGG: son:SO1495 glycogen operon protein; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase, family 13 domain protein; alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; glycogen debranching protein GlgX 1399611 5081561 Sputcn32_1249 Shewanella putrefaciens CN-32 glycogen debranching protein GlgX YP_001182776.1 1397404 D 319224 CDS YP_001182777.1 146292353 5081562 1399614..1402142 1 NC_009438.1 KEGG: she:Shewmr4_2756 glycogen/starch/alpha-glucan phosphorylases; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; PFAM: glycosyl transferase, family 35; glycogen/starch/alpha-glucan phosphorylase 1402142 5081562 Sputcn32_1250 Shewanella putrefaciens CN-32 glycogen/starch/alpha-glucan phosphorylase YP_001182777.1 1399614 D 319224 CDS YP_001182778.1 146292354 5081563 1402193..1403455 1 NC_009438.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 1403455 glgC 5081563 glgC Shewanella putrefaciens CN-32 glucose-1-phosphate adenylyltransferase YP_001182778.1 1402193 D 319224 CDS YP_001182779.1 146292355 5081564 1403526..1405133 1 NC_009438.1 PFAM: glycosyl transferase, group 1; Starch synthase catalytic domain protein; KEGG: shm:Shewmr7_2832 starch synthase; starch synthase 1405133 5081564 Sputcn32_1252 Shewanella putrefaciens CN-32 starch synthase YP_001182779.1 1403526 D 319224 CDS YP_001182780.1 146292356 5080980 1405242..1408298 1 NC_009438.1 KEGG: shm:Shewmr7_2831 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; 5TM Receptors of the LytS-YhcK type, transmembrane region; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 1408298 5080980 Sputcn32_1253 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001182780.1 1405242 D 319224 CDS YP_001182781.1 146292357 5080981 1408419..1409864 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: son:SO1501 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase 1409864 5080981 Sputcn32_1254 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001182781.1 1408419 D 319224 CDS YP_001182782.1 146292358 5080982 1409979..1411061 1 NC_009438.1 PFAM: cobalamin synthesis protein, P47K; cobalamin synthesis CobW domain protein; KEGG: son:SO1502 cobalamin synthesis protein/P47K family protein; cobalamin synthesis protein, P47K 1411061 5080982 Sputcn32_1255 Shewanella putrefaciens CN-32 cobalamin synthesis protein, P47K YP_001182782.1 1409979 D 319224 CDS YP_001182783.1 146292359 5080983 complement(1411075..1411836) 1 NC_009438.1 KEGG: son:SO1503 ABC transporter, periplasmic substrate-binding protein, putative; ABC transporter substrate-binding protein 1411836 5080983 Sputcn32_1256 Shewanella putrefaciens CN-32 ABC transporter substrate-binding protein YP_001182783.1 1411075 R 319224 CDS YP_001182784.1 146292360 5080984 1412201..1412722 1 NC_009438.1 KEGG: son:SO1504 hypothetical protein; hypothetical protein 1412722 5080984 Sputcn32_1257 Shewanella putrefaciens CN-32 hypothetical protein YP_001182784.1 1412201 D 319224 CDS YP_001182785.1 146292361 5080985 complement(1412801..1414342) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_2748 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1414342 5080985 Sputcn32_1258 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001182785.1 1412801 R 319224 CDS YP_001182786.1 146292362 5080986 1414742..1416091 1 NC_009438.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO1506 MATE efflux family protein; multi anti extrusion protein MatE 1416091 5080986 Sputcn32_1259 Shewanella putrefaciens CN-32 multi anti extrusion protein MatE YP_001182786.1 1414742 D 319224 CDS YP_001182787.1 146292363 5080987 1416336..1417847 1 NC_009438.1 KEGG: shm:Shewmr7_2824 hypothetical protein; hypothetical protein 1417847 5080987 Sputcn32_1260 Shewanella putrefaciens CN-32 hypothetical protein YP_001182787.1 1416336 D 319224 CDS YP_001182788.1 146292364 5080988 1417967..1418437 1 NC_009438.1 hypothetical protein 1418437 5080988 Sputcn32_1261 Shewanella putrefaciens CN-32 hypothetical protein YP_001182788.1 1417967 D 319224 CDS YP_001182789.1 146292365 5080989 1418726..1419139 1 NC_009438.1 hypothetical protein 1419139 5080989 Sputcn32_1262 Shewanella putrefaciens CN-32 hypothetical protein YP_001182789.1 1418726 D 319224 CDS YP_001182790.1 146292366 5080990 1419270..1420004 1 NC_009438.1 KEGG: bpa:BPP0522 hypothetical protein; hypothetical protein 1420004 5080990 Sputcn32_1263 Shewanella putrefaciens CN-32 hypothetical protein YP_001182790.1 1419270 D 319224 CDS YP_001182791.1 146292367 5080991 1420167..1421144 1 NC_009438.1 PFAM: protein of unknown function DUF1568; KEGG: son:SO1890 hypothetical protein; hypothetical protein 1421144 5080991 Sputcn32_1264 Shewanella putrefaciens CN-32 hypothetical protein YP_001182791.1 1420167 D 319224 CDS YP_001182792.1 146292368 5080992 1421491..1422354 1 NC_009438.1 PFAM: putative esterase; KEGG: sdn:Sden_3719 putative esterase; putative esterase 1422354 5080992 Sputcn32_1265 Shewanella putrefaciens CN-32 putative esterase YP_001182792.1 1421491 D 319224 CDS YP_001182793.1 146292369 5080993 1422460..1422957 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdn:Sden_3086 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1422957 5080993 Sputcn32_1266 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182793.1 1422460 D 319224 CDS YP_001182794.1 146292370 5080994 complement(1423427..1424605) 1 NC_009438.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: shm:Shewmr7_2812 AAA ATPase, central domain protein; ATPase central domain-containing protein 1424605 5080994 Sputcn32_1267 Shewanella putrefaciens CN-32 ATPase central domain-containing protein YP_001182794.1 1423427 R 319224 CDS YP_001182795.1 146292371 5080995 complement(1425170..1425739) 1 NC_009438.1 PFAM: protein of unknown function DUF162; KEGG: she:Shewmr4_2738 protein of unknown function DUF162; hypothetical protein 1425739 5080995 Sputcn32_1268 Shewanella putrefaciens CN-32 hypothetical protein YP_001182795.1 1425170 R 319224 CDS YP_001182796.1 146292372 5080996 complement(1425741..1427135) 1 NC_009438.1 KEGG: shm:Shewmr7_2810 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 1427135 5080996 Sputcn32_1269 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001182796.1 1425741 R 319224 CDS YP_001182797.1 146292373 5080997 complement(1427146..1427889) 1 NC_009438.1 PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: she:Shewmr4_2736 protein of unknown function DUF224, cysteine-rich region domain protein; hypothetical protein 1427889 5080997 Sputcn32_1270 Shewanella putrefaciens CN-32 hypothetical protein YP_001182797.1 1427146 R 319224 CDS YP_001182798.1 146292374 5080998 complement(1428202..1431006) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; FAD linked oxidase domain protein; KEGG: son:SO1521 iron-sulfur cluster-binding protein; FAD linked oxidase domain-containing protein 1431006 5080998 Sputcn32_1271 Shewanella putrefaciens CN-32 FAD linked oxidase domain-containing protein YP_001182798.1 1428202 R 319224 CDS YP_001182799.1 146292375 5080999 complement(1431086..1432729) 1 NC_009438.1 PFAM: L-lactate permease; KEGG: son:SO1522 L-lactate permease, putative; L-lactate permease 1432729 5080999 Sputcn32_1272 Shewanella putrefaciens CN-32 L-lactate permease YP_001182799.1 1431086 R 319224 CDS YP_001182800.1 146292376 5081000 complement(1433576..1434505) 1 NC_009438.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1434505 ppnK 5081000 ppnK Shewanella putrefaciens CN-32 inorganic polyphosphate/ATP-NAD kinase YP_001182800.1 1433576 R 319224 CDS YP_001182801.1 146292377 5081001 1434555..1435175 1 NC_009438.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 1435175 5081001 Sputcn32_1274 Shewanella putrefaciens CN-32 heat shock protein GrpE YP_001182801.1 1434555 D 319224 CDS YP_001182802.1 146292378 5081002 complement(1435280..1437148) 1 NC_009438.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1437148 5081002 Sputcn32_1275 Shewanella putrefaciens CN-32 1-deoxy-D-xylulose-5-phosphate synthase YP_001182802.1 1435280 R 319224 CDS YP_001182803.1 146292379 5081003 complement(1437170..1438051) 1 NC_009438.1 PFAM: Polyprenyl synthetase; KEGG: son:SO1526 geranyltranstransferase; polyprenyl synthetase 1438051 5081003 Sputcn32_1276 Shewanella putrefaciens CN-32 polyprenyl synthetase YP_001182803.1 1437170 R 319224 CDS YP_001182804.1 146292380 5081004 complement(1438054..1438293) 1 NC_009438.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; KEGG: shm:Shewmr7_2802 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 1438293 5081004 Sputcn32_1277 Shewanella putrefaciens CN-32 exodeoxyribonuclease VII small subunit YP_001182804.1 1438054 R 319224 CDS YP_001182805.1 146292381 5081005 1438605..1439372 1 NC_009438.1 Homologous to MotA in E. coli and Salmonella. With PomB forms the ion channels that couple flagellar rotation to sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.; flagellar motor protein PomA 1439372 5081005 Sputcn32_1278 Shewanella putrefaciens CN-32 flagellar motor protein PomA YP_001182805.1 1438605 D 319224 CDS YP_001182806.1 146292382 5081006 1439376..1440302 1 NC_009438.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar motor protein MotB 1440302 motB 5081006 motB Shewanella putrefaciens CN-32 flagellar motor protein MotB YP_001182806.1 1439376 D 319224 CDS YP_001182807.1 146292383 5081007 1440516..1441970 1 NC_009438.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1441970 5081007 Sputcn32_1280 Shewanella putrefaciens CN-32 thiamine biosynthesis protein ThiI YP_001182807.1 1440516 D 319224 CDS YP_001182808.1 146292384 5081008 complement(1442056..1442295) 1 NC_009438.1 KEGG: shm:Shewmr7_2796 hypothetical protein; hypothetical protein 1442295 5081008 Sputcn32_1281 Shewanella putrefaciens CN-32 hypothetical protein YP_001182808.1 1442056 R 319224 CDS YP_001182809.1 146292385 5081009 1442473..1443384 1 NC_009438.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 1443384 5081009 Sputcn32_1282 Shewanella putrefaciens CN-32 DNA-binding transcriptional activator GcvA YP_001182809.1 1442473 D 319224 CDS YP_001182810.1 146292386 5081010 1443365..1444039 1 NC_009438.1 KEGG: shm:Shewmr7_2794 hypothetical protein; hypothetical protein 1444039 5081010 Sputcn32_1283 Shewanella putrefaciens CN-32 hypothetical protein YP_001182810.1 1443365 D 319224 CDS YP_001182811.1 146292387 5081011 1444068..1444460 1 NC_009438.1 PFAM: protein of unknown function DUF423; KEGG: son:SO1535 hypothetical protein; hypothetical protein 1444460 5081011 Sputcn32_1284 Shewanella putrefaciens CN-32 hypothetical protein YP_001182811.1 1444068 D 319224 CDS YP_001182812.1 146292388 5081012 1444638..1445723 1 NC_009438.1 KEGG: she:Shewmr4_2721 hypothetical protein; putative RNA 2'-O-ribose methyltransferase 1445723 5081012 Sputcn32_1285 Shewanella putrefaciens CN-32 putative RNA 2'-O-ribose methyltransferase YP_001182812.1 1444638 D 319224 CDS YP_001182813.1 146292389 5081013 complement(1445822..1446832) 1 NC_009438.1 catalyzes the formation of 2-oxoglutarate from isocitrate; isocitrate dehydrogenase 1446832 5081013 Sputcn32_1286 Shewanella putrefaciens CN-32 isocitrate dehydrogenase YP_001182813.1 1445822 R 319224 CDS YP_001182814.1 146292390 5081014 1447086..1449911 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: she:Shewmr4_2719 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1449911 5081014 Sputcn32_1287 Shewanella putrefaciens CN-32 peptidase S9 prolyl oligopeptidase YP_001182814.1 1447086 D 319224 CDS YP_001182815.1 146292391 5081015 complement(1449994..1450419) 1 NC_009438.1 KEGG: she:Shewmr4_2717 hypothetical protein; hypothetical protein 1450419 5081015 Sputcn32_1288 Shewanella putrefaciens CN-32 hypothetical protein YP_001182815.1 1449994 R 319224 CDS YP_001182816.1 146292392 5081016 complement(1450530..1451318) 1 NC_009438.1 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 1451318 xni 5081016 xni Shewanella putrefaciens CN-32 exonuclease IX YP_001182816.1 1450530 R 319224 CDS YP_001182817.1 146292393 5081017 complement(1451340..1452695) 1 NC_009438.1 PFAM: conserved hypothetical protein 730; KEGG: shm:Shewmr7_2783 conserved hypothetical protein 730; hypothetical protein 1452695 5081017 Sputcn32_1290 Shewanella putrefaciens CN-32 hypothetical protein YP_001182817.1 1451340 R 319224 CDS YP_001182818.1 146292394 5081018 complement(1452751..1454307) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shm:Shewmr7_2782 diguanylate cyclase; diguanylate cyclase 1454307 5081018 Sputcn32_1291 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001182818.1 1452751 R 319224 CDS YP_001182819.1 146292395 5081019 complement(1454460..1456631) 1 NC_009438.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: shm:Shewmr7_2781 TPR repeat-containing protein; hypothetical protein 1456631 5081019 Sputcn32_1292 Shewanella putrefaciens CN-32 hypothetical protein YP_001182819.1 1454460 R 319224 CDS YP_001182820.1 146292396 5081020 1456786..1458597 1 NC_009438.1 PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: she:Shewmr4_2712 peptidase M61 domain protein; peptidase M61 domain-containing protein 1458597 5081020 Sputcn32_1293 Shewanella putrefaciens CN-32 peptidase M61 domain-containing protein YP_001182820.1 1456786 D 319224 CDS YP_001182821.1 146292397 5081021 complement(1458679..1459593) 1 NC_009438.1 Required for efficient pilin antigenic variation; recombination associated protein 1459593 rdgC 5081021 rdgC Shewanella putrefaciens CN-32 recombination associated protein YP_001182821.1 1458679 R 319224 CDS YP_001182822.1 146292398 5081022 1459885..1460835 1 NC_009438.1 PFAM: porin, Gram-negative type; KEGG: she:Shewmr4_2710 porin, gram-negative type; porin 1460835 5081022 Sputcn32_1295 Shewanella putrefaciens CN-32 porin YP_001182822.1 1459885 D 319224 CDS YP_001182823.1 146292399 5081023 1461022..1461711 1 NC_009438.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shm:Shewmr7_2777 two component transcriptional regulator, winged helix family; two component transcriptional regulator 1461711 5081023 Sputcn32_1296 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001182823.1 1461022 D 319224 CDS YP_001182824.1 146292400 5081024 1461791..1463089 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: son:SO1559 phosphate regulon sensor protein PhoR; PAS/PAC sensor signal transduction histidine kinase 1463089 5081024 Sputcn32_1297 Shewanella putrefaciens CN-32 PAS/PAC sensor signal transduction histidine kinase YP_001182824.1 1461791 D 319224 CDS YP_001182825.1 146292401 5081025 1463316..1464287 1 NC_009438.1 TIGRFAM: phosphate binding protein; KEGG: she:Shewmr4_2707 phosphate binding protein; phosphate binding protein 1464287 5081025 Sputcn32_1298 Shewanella putrefaciens CN-32 phosphate binding protein YP_001182825.1 1463316 D 319224 CDS YP_001182826.1 146292402 5081026 1464754..1466592 1 NC_009438.1 PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: son:SO1561 peptidase, M1 family; peptidase M1, membrane alanine aminopeptidase 1466592 5081026 Sputcn32_1299 Shewanella putrefaciens CN-32 peptidase M1, membrane alanine aminopeptidase YP_001182826.1 1464754 D 319224 CDS YP_001182827.1 146292403 5081027 complement(1467157..1467642) 1 NC_009438.1 PFAM: glutathione peroxidase; KEGG: she:Shewmr4_2705 glutathione peroxidase; glutathione peroxidase 1467642 5081027 Sputcn32_1300 Shewanella putrefaciens CN-32 glutathione peroxidase YP_001182827.1 1467157 R 319224 CDS YP_001182828.1 146292404 5081028 1467706..1469160 1 NC_009438.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: she:Shewmr4_2704 MgtE intracellular region; magnesium transporter 1469160 5081028 Sputcn32_1301 Shewanella putrefaciens CN-32 magnesium transporter YP_001182828.1 1467706 D 319224 CDS YP_001182829.1 146292405 5081029 1469205..1469726 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_2703 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1469726 5081029 Sputcn32_1302 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182829.1 1469205 D 319224 CDS YP_001182830.1 146292406 5080930 1469891..1470430 1 NC_009438.1 PFAM: YfaZ family protein; KEGG: she:Shewmr4_2702 YfaZ family protein; hypothetical protein 1470430 5080930 Sputcn32_1303 Shewanella putrefaciens CN-32 hypothetical protein YP_001182830.1 1469891 D 319224 CDS YP_001182831.1 146292407 5080931 complement(1470728..1470925) 1 NC_009438.1 KEGG: she:Shewmr4_2698 hypothetical protein; hypothetical protein 1470925 5080931 Sputcn32_1304 Shewanella putrefaciens CN-32 hypothetical protein YP_001182831.1 1470728 R 319224 CDS YP_001182832.1 146292408 5080932 complement(1471175..1472566) 1 NC_009438.1 PFAM: Fmu (Sun) domain protein; KEGG: son:SO1575 NOL1/NOP2/sun family putative RNA methylase; Fmu (Sun) domain-containing protein 1472566 5080932 Sputcn32_1305 Shewanella putrefaciens CN-32 Fmu (Sun) domain-containing protein YP_001182832.1 1471175 R 319224 CDS YP_001182833.1 146292409 5080933 complement(1472805..1473473) 1 NC_009438.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: shm:Shewmr7_2764 glutathione S-transferase, N-terminal domain protein; glutathione S-transferase domain-containing protein 1473473 5080933 Sputcn32_1306 Shewanella putrefaciens CN-32 glutathione S-transferase domain-containing protein YP_001182833.1 1472805 R 319224 CDS YP_001182834.1 146292410 5080934 complement(1473491..1474204) 1 NC_009438.1 KEGG: she:Shewmr4_2693 hypothetical protein; hypothetical protein 1474204 5080934 Sputcn32_1307 Shewanella putrefaciens CN-32 hypothetical protein YP_001182834.1 1473491 R 319224 CDS YP_001182835.1 146292411 5080935 1474519..1476732 1 NC_009438.1 TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1580 TonB-dependent heme receptor; TonB-dependent heme/hemoglobin receptor family protein 1476732 5080935 Sputcn32_1308 Shewanella putrefaciens CN-32 TonB-dependent heme/hemoglobin receptor family protein YP_001182835.1 1474519 D 319224 CDS YP_001182836.1 146292412 5080936 1476867..1477430 1 NC_009438.1 PFAM: PhnA protein-like; SMART: PhnA protein N-terminal, proteobacterial; KEGG: son:SO1581 PhnA protein; PhnA-like protein 1477430 5080936 Sputcn32_1309 Shewanella putrefaciens CN-32 PhnA-like protein YP_001182836.1 1476867 D 319224 CDS YP_001182837.1 146292413 5080937 complement(1477529..1478734) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: pau:PA14_03550 putative MFS transporter; major facilitator superfamily transporter 1478734 5080937 Sputcn32_1310 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001182837.1 1477529 R 319224 CDS YP_001182838.1 146292414 5080938 1478965..1479543 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: shm:Shewmr7_2759 transcriptional regulator, MarR family; MarR family transcriptional regulator 1479543 5080938 Sputcn32_1311 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001182838.1 1478965 D 319224 CDS YP_001182839.1 146292415 5080939 1479669..1480682 1 NC_009438.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: son:SO1583 hypothetical protein; succinylglutamate desuccinylase/aspartoacylase 1480682 5080939 Sputcn32_1312 Shewanella putrefaciens CN-32 succinylglutamate desuccinylase/aspartoacylase YP_001182839.1 1479669 D 319224 CDS YP_001182840.1 146292416 5080940 complement(1480688..1482715) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: sdn:Sden_2638 chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1482715 5080940 Sputcn32_1313 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182840.1 1480688 R 319224 CDS YP_001182841.1 146292417 5080941 1482887..1483513 1 NC_009438.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: son:SO1585 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 1483513 5080941 Sputcn32_1314 Shewanella putrefaciens CN-32 fumarylacetoacetate (FAA) hydrolase YP_001182841.1 1482887 D 319224 CDS YP_001182842.1 146292418 5080942 complement(1483624..1483866) 1 NC_009438.1 KEGG: she:Shewmr4_2686 hypothetical protein; hypothetical protein 1483866 5080942 Sputcn32_1315 Shewanella putrefaciens CN-32 hypothetical protein YP_001182842.1 1483624 R 319224 CDS YP_001182843.1 146292419 5080943 1484197..1484985 1 NC_009438.1 KEGG: son:SO1589 hypothetical protein; hypothetical protein 1484985 5080943 Sputcn32_1316 Shewanella putrefaciens CN-32 hypothetical protein YP_001182843.1 1484197 D 319224 CDS YP_001182844.1 146292420 5080944 complement(1485147..1485692) 1 NC_009438.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: shm:Shewmr7_2744 transport-associated; transport-associated 1485692 5080944 Sputcn32_1317 Shewanella putrefaciens CN-32 transport-associated YP_001182844.1 1485147 R 319224 CDS YP_001182845.1 146292421 5080945 complement(1485920..1486369) 1 NC_009438.1 KEGG: shm:Shewmr7_2743 hypothetical protein; hypothetical protein 1486369 5080945 Sputcn32_1318 Shewanella putrefaciens CN-32 hypothetical protein YP_001182845.1 1485920 R 319224 CDS YP_001182846.1 146292422 5080946 1486605..1487978 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: shm:Shewmr7_2742 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 1487978 5080946 Sputcn32_1319 Shewanella putrefaciens CN-32 sigma-54 dependent trancsriptional regulator YP_001182846.1 1486605 D 319224 CDS YP_001182847.1 146292423 5080947 complement(1488056..1489738) 1 NC_009438.1 PFAM: Dual specificity protein phosphatase; diacylglycerol kinase, catalytic region; KEGG: she:Shewmr4_2673 dual specificity protein phosphatase; hypothetical protein 1489738 5080947 Sputcn32_1320 Shewanella putrefaciens CN-32 hypothetical protein YP_001182847.1 1488056 R 319224 CDS YP_001182848.1 146292424 5080948 complement(1489890..1490084) 1 NC_009438.1 KEGG: shm:Shewmr7_2740 hypothetical protein; hypothetical protein 1490084 5080948 Sputcn32_1321 Shewanella putrefaciens CN-32 hypothetical protein YP_001182848.1 1489890 R 319224 CDS YP_001182849.1 146292425 5080949 complement(1490109..1490285) 1 NC_009438.1 PFAM: protein of unknown function DUF1328; KEGG: shm:Shewmr7_2739 protein of unknown function DUF1328; hypothetical protein 1490285 5080949 Sputcn32_1322 Shewanella putrefaciens CN-32 hypothetical protein YP_001182849.1 1490109 R 319224 CDS YP_001182850.1 146292426 5080950 complement(1490597..1492255) 1 NC_009438.1 KEGG: shm:Shewmr7_2736 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 1492255 5080950 Sputcn32_1323 Shewanella putrefaciens CN-32 2-nitropropane dioxygenase YP_001182850.1 1490597 R 319224 CDS YP_001182851.1 146292427 5080951 complement(1492360..1498317) 1 NC_009438.1 PFAM: beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: she:Shewmr4_2668 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ 1498317 5080951 Sputcn32_1324 Shewanella putrefaciens CN-32 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_001182851.1 1492360 R 319224 CDS YP_001182852.1 146292428 5080952 complement(1498314..1500623) 1 NC_009438.1 KEGG: shm:Shewmr7_2734 omega-3 polyunsaturated fatty acid synthase PfaB; omega-3 polyunsaturated fatty acid synthase PfaB 1500623 5080952 Sputcn32_1325 Shewanella putrefaciens CN-32 omega-3 polyunsaturated fatty acid synthase PfaB YP_001182852.1 1498314 R 319224 CDS YP_001182853.1 146292429 5080953 complement(1500620..1508548) 1 NC_009438.1 PFAM: beta-ketoacyl synthase; acyl transferase domain protein; short-chain dehydrogenase/reductase SDR; KR; KEGG: shm:Shewmr7_2733 beta-ketoacyl synthase; erythronolide synthase 1508548 5080953 Sputcn32_1326 Shewanella putrefaciens CN-32 erythronolide synthase YP_001182853.1 1500620 R 319224 CDS YP_001182854.1 146292430 5080954 complement(1508545..1509414) 1 NC_009438.1 KEGG: shm:Shewmr7_2732 transcriptional regulator, putative; transcriptional regulator 1509414 5080954 Sputcn32_1327 Shewanella putrefaciens CN-32 transcriptional regulator YP_001182854.1 1508545 R 319224 CDS YP_001182855.1 146292431 5080955 1509807..1510730 1 NC_009438.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: shm:Shewmr7_2731 4'-phosphopantetheinyl transferase; 4'-phosphopantetheinyl transferase 1510730 5080955 Sputcn32_1328 Shewanella putrefaciens CN-32 4'-phosphopantetheinyl transferase YP_001182855.1 1509807 D 319224 CDS YP_001182856.1 146292432 5080956 complement(1510835..1511725) 1 NC_009438.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1511725 queF 5080956 queF Shewanella putrefaciens CN-32 7-cyano-7-deazaguanine reductase YP_001182856.1 1510835 R 319224 CDS YP_001182857.1 146292433 5080957 1511752..1512402 1 NC_009438.1 putative SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 1512402 5080957 Sputcn32_1330 Shewanella putrefaciens CN-32 SecY interacting protein Syd YP_001182857.1 1511752 D 319224 CDS YP_001182858.1 146292434 5080958 complement(1512520..1513293) 1 NC_009438.1 KEGG: son:SO1610 hypothetical protein; hypothetical protein 1513293 5080958 Sputcn32_1331 Shewanella putrefaciens CN-32 hypothetical protein YP_001182858.1 1512520 R 319224 CDS YP_001182859.1 146292435 5080959 complement(1513293..1513676) 1 NC_009438.1 KEGG: shm:Shewmr7_2725 hypothetical protein; hypothetical protein 1513676 5080959 Sputcn32_1332 Shewanella putrefaciens CN-32 hypothetical protein YP_001182859.1 1513293 R 319224 CDS YP_001182860.1 146292436 5080960 1513822..1514217 1 NC_009438.1 KEGG: shm:Shewmr7_2724 hypothetical protein; hypothetical protein 1514217 5080960 Sputcn32_1333 Shewanella putrefaciens CN-32 hypothetical protein YP_001182860.1 1513822 D 319224 CDS YP_001182861.1 146292437 5080961 complement(1514249..1514482) 1 NC_009438.1 KEGG: son:SO1613 hypothetical protein; hypothetical protein 1514482 5080961 Sputcn32_1334 Shewanella putrefaciens CN-32 hypothetical protein YP_001182861.1 1514249 R 319224 CDS YP_001182862.1 146292438 5080962 1514633..1515271 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1614 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1515271 5080962 Sputcn32_1335 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182862.1 1514633 D 319224 CDS YP_001182863.1 146292439 5080963 complement(1516543..1516929) 1 NC_009438.1 KEGG: son:SO1617 hypothetical protein; hypothetical protein 1516929 5080963 Sputcn32_1336 Shewanella putrefaciens CN-32 hypothetical protein YP_001182863.1 1516543 R 319224 CDS YP_001182864.1 146292440 5080964 complement(1516926..1517939) 1 NC_009438.1 KEGG: she:Shewmr4_2652 hypothetical protein; hypothetical protein 1517939 5080964 Sputcn32_1337 Shewanella putrefaciens CN-32 hypothetical protein YP_001182864.1 1516926 R 319224 CDS YP_001182865.1 146292441 5080965 1518089..1518409 1 NC_009438.1 PFAM: protein of unknown function DUF446; KEGG: shm:Shewmr7_2718 protein of unknown function DUF446; hypothetical protein 1518409 5080965 Sputcn32_1338 Shewanella putrefaciens CN-32 hypothetical protein YP_001182865.1 1518089 D 319224 CDS YP_001182866.1 146292442 5080966 1518411..1519238 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: shm:Shewmr7_2717 pseudouridylate synthase; pseudouridylate synthase 1519238 5080966 Sputcn32_1339 Shewanella putrefaciens CN-32 pseudouridylate synthase YP_001182866.1 1518411 D 319224 CDS YP_001182867.1 146292443 5080967 complement(1519322..1519504) 1 NC_009438.1 hypothetical protein 1519504 5080967 Sputcn32_1340 Shewanella putrefaciens CN-32 hypothetical protein YP_001182867.1 1519322 R 319224 CDS YP_001182868.1 146292444 5080968 1519629..1520093 1 NC_009438.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1520093 5080968 Sputcn32_1341 Shewanella putrefaciens CN-32 flavodoxin YP_001182868.1 1519629 D 319224 CDS YP_001182869.1 146292445 5080969 1520045..1521526 1 NC_009438.1 TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: shm:Shewmr7_2715 PTS system, glucose-like IIB subunint; PTS system glucose-like transporter subunit IIB 1521526 5080969 Sputcn32_1342 Shewanella putrefaciens CN-32 PTS system glucose-like transporter subunit IIB YP_001182869.1 1520045 D 319224 CDS YP_001182870.1 146292446 5080970 1521641..1522591 1 NC_009438.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1522591 purU 5080970 purU Shewanella putrefaciens CN-32 formyltetrahydrofolate deformylase YP_001182870.1 1521641 D 319224 CDS YP_001182871.1 146292447 5080971 1522765..1524696 1 NC_009438.1 KEGG: shm:Shewmr7_2713 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: CBS domain containing protein; GAF domain protein; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 1524696 5080971 Sputcn32_1344 Shewanella putrefaciens CN-32 metal dependent phosphohydrolase YP_001182871.1 1522765 D 319224 CDS YP_001182872.1 146292448 5080972 complement(1524766..1525590) 1 NC_009438.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1525590 dapD 5080972 dapD Shewanella putrefaciens CN-32 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_001182872.1 1524766 R 319224 CDS YP_001182873.1 146292449 5080973 complement(1525616..1528198) 1 NC_009438.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 1528198 5080973 Sputcn32_1346 Shewanella putrefaciens CN-32 PII uridylyl-transferase YP_001182873.1 1525616 R 319224 CDS YP_001182874.1 146292450 5080974 complement(1528221..1529057) 1 NC_009438.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1529057 5080974 Sputcn32_1347 Shewanella putrefaciens CN-32 methionine aminopeptidase YP_001182874.1 1528221 R 319224 CDS YP_001182875.1 146292451 5080975 1529330..1530058 1 NC_009438.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1530058 rpsB 5080975 rpsB Shewanella putrefaciens CN-32 30S ribosomal protein S2 YP_001182875.1 1529330 D 319224 CDS YP_001182876.1 146292452 5080976 1530179..1531030 1 NC_009438.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1531030 tsf 5080976 tsf Shewanella putrefaciens CN-32 elongation factor Ts YP_001182876.1 1530179 D 319224 CDS YP_001182877.1 146292453 5080977 1531099..1531836 1 NC_009438.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1531836 pyrH 5080977 pyrH Shewanella putrefaciens CN-32 uridylate kinase YP_001182877.1 1531099 D 319224 CDS YP_001182878.1 146292454 5080978 1531858..1532415 1 NC_009438.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1532415 frr 5080978 frr Shewanella putrefaciens CN-32 ribosome recycling factor YP_001182878.1 1531858 D 319224 CDS YP_001182879.1 146292455 5080979 1532498..1533325 1 NC_009438.1 KEGG: son:SO1633 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1533325 5080979 Sputcn32_1352 Shewanella putrefaciens CN-32 undecaprenyl diphosphate synthase YP_001182879.1 1532498 D 319224 CDS YP_001182880.1 146292456 5080548 1533346..1534203 1 NC_009438.1 PFAM: phosphatidate cytidylyltransferase; KEGG: shm:Shewmr7_2703 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1534203 5080548 Sputcn32_1353 Shewanella putrefaciens CN-32 phosphatidate cytidylyltransferase YP_001182880.1 1533346 D 319224 CDS YP_001182881.1 146292457 5080549 1534217..1535398 1 NC_009438.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1535398 5080549 Sputcn32_1354 Shewanella putrefaciens CN-32 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_001182881.1 1534217 D 319224 CDS YP_001182882.1 146292458 5080550 1535441..1536811 1 NC_009438.1 TIGRFAM: putative membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: shm:Shewmr7_2701 putative membrane-associated zinc metalloprotease; putative membrane-associated zinc metalloprotease 1536811 5080550 Sputcn32_1355 Shewanella putrefaciens CN-32 putative membrane-associated zinc metalloprotease YP_001182882.1 1535441 D 319224 CDS YP_001182883.1 146292459 5080551 1536843..1539323 1 NC_009438.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: shm:Shewmr7_2700 surface antigen (D15); surface antigen (D15) 1539323 5080551 Sputcn32_1356 Shewanella putrefaciens CN-32 surface antigen (D15) YP_001182883.1 1536843 D 319224 CDS YP_001182884.1 146292460 5080552 1539388..1539885 1 NC_009438.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: shm:Shewmr7_2699 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 1539885 5080552 Sputcn32_1357 Shewanella putrefaciens CN-32 outer membrane chaperone Skp YP_001182884.1 1539388 D 319224 CDS YP_001182885.1 146292461 5080553 1539889..1540914 1 NC_009438.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1540914 lpxD 5080553 lpxD Shewanella putrefaciens CN-32 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_001182885.1 1539889 D 319224 CDS YP_001182886.1 146292462 5080554 1540944..1541408 1 NC_009438.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1541408 fabZ 5080554 fabZ Shewanella putrefaciens CN-32 (3R)-hydroxymyristoyl-ACP dehydratase YP_001182886.1 1540944 D 319224 CDS YP_001182887.1 146292463 5080555 1541405..1542175 1 NC_009438.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1542175 5080555 Sputcn32_1360 Shewanella putrefaciens CN-32 UDP-N-acetylglucosamine acyltransferase YP_001182887.1 1541405 D 319224 CDS YP_001182888.1 146292464 5080556 1542298..1543452 1 NC_009438.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1543452 lpxB 5080556 lpxB Shewanella putrefaciens CN-32 lipid-A-disaccharide synthase YP_001182888.1 1542298 D 319224 CDS YP_001182889.1 146292465 5080557 1543455..1544084 1 NC_009438.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1544084 rnhB 5080557 rnhB Shewanella putrefaciens CN-32 ribonuclease HII YP_001182889.1 1543455 D 319224 CDS YP_001182890.1 146292466 5080558 1544202..1547675 1 NC_009438.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1547675 dnaE 5080558 dnaE Shewanella putrefaciens CN-32 DNA polymerase III subunit alpha YP_001182890.1 1544202 D 319224 CDS YP_001182891.1 146292467 5080559 1547735..1549132 1 NC_009438.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: she:Shewmr4_2625 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 1549132 5080559 Sputcn32_1364 Shewanella putrefaciens CN-32 tRNA(Ile)-lysidine synthetase YP_001182891.1 1547735 D 319224 CDS YP_001182892.1 146292468 5080560 complement(1549195..1550073) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO1646 GGDEF family protein; diguanylate cyclase 1550073 5080560 Sputcn32_1365 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001182892.1 1549195 R 319224 CDS YP_001182893.1 146292469 5080561 complement(1550427..1550636) 1 NC_009438.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: shm:Shewmr7_2689 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1550636 5080561 Sputcn32_1366 Shewanella putrefaciens CN-32 cold-shock DNA-binding domain-containing protein YP_001182893.1 1550427 R 319224 CDS YP_001182894.1 146292470 5080562 1551413..1553257 1 NC_009438.1 PFAM: protein of unknown function DUF885; KEGG: she:Shewmr4_2621 protein of unknown function DUF885; hypothetical protein 1553257 5080562 Sputcn32_1367 Shewanella putrefaciens CN-32 hypothetical protein YP_001182894.1 1551413 D 319224 CDS YP_001182895.1 146292471 5080563 1553486..1556707 1 NC_009438.1 PFAM: SNF2-related protein; helicase domain protein; zinc finger, SWIM domain protein; SMART: DEAD-like helicases-like; KEGG: shm:Shewmr7_2687 SNF2-related protein; SNF2-like protein 1556707 5080563 Sputcn32_1368 Shewanella putrefaciens CN-32 SNF2-like protein YP_001182895.1 1553486 D 319224 CDS YP_001182896.1 146292472 5080564 1556756..1557511 1 NC_009438.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: she:Shewmr4_2619 PHP C-terminal domain protein; putative hydrolase 1557511 5080564 Sputcn32_1369 Shewanella putrefaciens CN-32 putative hydrolase YP_001182896.1 1556756 D 319224 CDS YP_001182897.1 146292473 5080565 1557605..1558426 1 NC_009438.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: shm:Shewmr7_2684 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 1558426 5080565 Sputcn32_1370 Shewanella putrefaciens CN-32 3'(2'),5'-bisphosphate nucleotidase YP_001182897.1 1557605 D 319224 CDS YP_001182898.1 146292474 5080566 1558499..1559416 1 NC_009438.1 catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 1559416 5080566 Sputcn32_1371 Shewanella putrefaciens CN-32 fructokinase YP_001182898.1 1558499 D 319224 CDS YP_001182899.1 146292475 5080567 1559564..1560259 1 NC_009438.1 PFAM: protein of unknown function DUF218; KEGG: son:SO1657 hypothetical protein; hypothetical protein 1560259 5080567 Sputcn32_1372 Shewanella putrefaciens CN-32 hypothetical protein YP_001182899.1 1559564 D 319224 CDS YP_001182900.1 146292476 5080568 1560263..1560937 1 NC_009438.1 KEGG: shm:Shewmr7_2681 hypothetical protein; hypothetical protein 1560937 5080568 Sputcn32_1373 Shewanella putrefaciens CN-32 hypothetical protein YP_001182900.1 1560263 D 319224 CDS YP_001182901.1 146292477 5080569 1560984..1561253 1 NC_009438.1 KEGG: son:SO0729 hypothetical protein; hypothetical protein 1561253 5080569 Sputcn32_1374 Shewanella putrefaciens CN-32 hypothetical protein YP_001182901.1 1560984 D 319224 CDS YP_001182902.1 146292478 5080570 1561833..1562270 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pat:Patl_0928 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1562270 5080570 Sputcn32_1375 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001182902.1 1561833 D 319224 CDS YP_001182903.1 146292479 5080571 1562351..1563238 1 NC_009438.1 KEGG: ccr:CC3235 hypothetical protein; hypothetical protein 1563238 5080571 Sputcn32_1376 Shewanella putrefaciens CN-32 hypothetical protein YP_001182903.1 1562351 D 319224 CDS YP_001182904.1 146292480 5080573 1564622..1565065 1 NC_009438.1 KEGG: son:SO2212 transposase, IS91 family, putative; IS91 family transposase 1565065 5080573 Sputcn32_1378 Shewanella putrefaciens CN-32 IS91 family transposase YP_001182904.1 1564622 D 319224 CDS YP_001182905.1 146292481 5080574 1565786..1566019 1 NC_009438.1 hypothetical protein 1566019 5080574 Sputcn32_1379 Shewanella putrefaciens CN-32 hypothetical protein YP_001182905.1 1565786 D 319224 CDS YP_001182906.1 146292482 5080575 complement(1566825..1569122) 1 NC_009438.1 KEGG: son:SO1659 decaheme cytochrome c; decaheme cytochrome c 1569122 5080575 Sputcn32_1380 Shewanella putrefaciens CN-32 decaheme cytochrome c YP_001182906.1 1566825 R 319224 CDS YP_001182907.1 146292483 5080576 complement(1569530..1570504) 1 NC_009438.1 PFAM: regulatory protein, LysR; KEGG: son:SO1661 transcriptional regulator, LysR family; LysR family transcriptional regulator 1570504 5080576 Sputcn32_1381 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001182907.1 1569530 R 319224 CDS YP_001182908.1 146292484 5080577 complement(1570820..1571233) 1 NC_009438.1 PFAM: protein of unknown function DUF583; KEGG: shm:Shewmr7_2678 protein of unknown function DUF583; hypothetical protein 1571233 5080577 Sputcn32_1382 Shewanella putrefaciens CN-32 hypothetical protein YP_001182908.1 1570820 R 319224 CDS YP_001182909.1 146292485 5080578 complement(1571322..1571828) 1 NC_009438.1 TIGRFAM: ferredoxin-type protein NapF; PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_2677 ferredoxin-type protein NapF; ferredoxin-type protein NapF 1571828 5080578 Sputcn32_1383 Shewanella putrefaciens CN-32 ferredoxin-type protein NapF YP_001182909.1 1571322 R 319224 CDS YP_001182910.1 146292486 5080579 complement(1571899..1572912) 1 NC_009438.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: she:Shewmr4_2609 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1572912 5080579 Sputcn32_1384 Shewanella putrefaciens CN-32 UDP-glucose 4-epimerase YP_001182910.1 1571899 R 319224 CDS YP_001182911.1 146292487 5080580 complement(1572912..1573820) 1 NC_009438.1 KEGG: shm:Shewmr7_2675 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase GalU 1573820 5080580 Sputcn32_1385 Shewanella putrefaciens CN-32 UTP-glucose-1-phosphate uridylyltransferase GalU YP_001182911.1 1572912 R 319224 CDS YP_001182912.1 146292488 5080581 1574132..1574932 1 NC_009438.1 phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 1574932 phhA 5080581 phhA Shewanella putrefaciens CN-32 phenylalanine 4-monooxygenase YP_001182912.1 1574132 D 319224 CDS YP_001182913.1 146292489 5080582 1575027..1575365 1 NC_009438.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 1575365 phhB 5080582 phhB Shewanella putrefaciens CN-32 pterin-4-alpha-carbinolamine dehydratase YP_001182913.1 1575027 D 319224 CDS YP_001182914.1 146292490 5080583 1575624..1577162 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; KEGG: shm:Shewmr7_2672 transcriptional regulator, TyrR; transcriptional regulator TyrR 1577162 5080583 Sputcn32_1388 Shewanella putrefaciens CN-32 transcriptional regulator TyrR YP_001182914.1 1575624 D 319224 CDS YP_001182915.1 146292491 5080584 1577543..1578529 1 NC_009438.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: son:SO1670 fumarylacetoacetate hydrolase family protein; fumarylacetoacetate (FAA) hydrolase 1578529 5080584 Sputcn32_1389 Shewanella putrefaciens CN-32 fumarylacetoacetate (FAA) hydrolase YP_001182915.1 1577543 D 319224 CDS YP_001182916.1 146292492 5080585 1578616..1579266 1 NC_009438.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; KEGG: son:SO1671 glutathione S-transferase family protein; maleylacetoacetate isomerase 1579266 5080585 Sputcn32_1390 Shewanella putrefaciens CN-32 maleylacetoacetate isomerase YP_001182916.1 1578616 D 319224 CDS YP_001182917.1 146292493 5080586 1579296..1579949 1 NC_009438.1 PFAM: protein of unknown function DUF925; KEGG: she:Shewmr4_2602 protein of unknown function DUF925; hypothetical protein 1579949 5080586 Sputcn32_1391 Shewanella putrefaciens CN-32 hypothetical protein YP_001182917.1 1579296 D 319224 CDS YP_001182918.1 146292494 5080587 1580321..1580968 1 NC_009438.1 receptor for colicin S4; outer membrane protein W 1580968 5080587 Sputcn32_1392 Shewanella putrefaciens CN-32 outer membrane protein W YP_001182918.1 1580321 D 319224 CDS YP_001182919.1 146292495 5080588 complement(1581048..1581791) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO1674 short chain dehydrogenase family protein; short-chain dehydrogenase/reductase SDR 1581791 5080588 Sputcn32_1393 Shewanella putrefaciens CN-32 short-chain dehydrogenase/reductase SDR YP_001182919.1 1581048 R 319224 CDS YP_001182920.1 146292496 5080589 1581909..1582343 1 NC_009438.1 KEGG: shm:Shewmr7_2666 hypothetical protein; hypothetical protein 1582343 5080589 Sputcn32_1394 Shewanella putrefaciens CN-32 hypothetical protein YP_001182920.1 1581909 D 319224 CDS YP_001182921.1 146292497 5080590 1582410..1583366 1 NC_009438.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 1583366 5080590 Sputcn32_1395 Shewanella putrefaciens CN-32 homoserine O-succinyltransferase YP_001182921.1 1582410 D 319224 CDS YP_001182922.1 146292498 5080591 complement(1583431..1585077) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: vch:VCA0220 hemolysin secretion protein HylB; methyl-accepting chemotaxis sensory transducer 1585077 5080591 Sputcn32_1396 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182922.1 1583431 R 319224 CDS YP_001182923.1 146292499 5080592 1585513..1586703 1 NC_009438.1 KEGG: shm:Shewmr7_2664 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferases; PFAM: Thiolase; acetyl-CoA acetyltransferase 1586703 5080592 Sputcn32_1397 Shewanella putrefaciens CN-32 acetyl-CoA acetyltransferase YP_001182923.1 1585513 D 319224 CDS YP_001182924.1 146292500 5080593 1586836..1588335 1 NC_009438.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: she:Shewmr4_2596 methylmalonate-semialdehyde dehydrogenase; methylmalonate-semialdehyde dehydrogenase 1588335 5080593 Sputcn32_1398 Shewanella putrefaciens CN-32 methylmalonate-semialdehyde dehydrogenase YP_001182924.1 1586836 D 319224 CDS YP_001182925.1 146292501 5080594 1588423..1589580 1 NC_009438.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: shm:Shewmr7_2662 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1589580 5080594 Sputcn32_1399 Shewanella putrefaciens CN-32 acyl-CoA dehydrogenase domain-containing protein YP_001182925.1 1588423 D 319224 CDS YP_001182926.1 146292502 5080595 1589640..1590413 1 NC_009438.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1590413 5080595 Sputcn32_1400 Shewanella putrefaciens CN-32 enoyl-CoA hydratase YP_001182926.1 1589640 D 319224 CDS YP_001182927.1 146292503 5080596 1590413..1591582 1 NC_009438.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: shm:Shewmr7_2660 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1591582 5080596 Sputcn32_1401 Shewanella putrefaciens CN-32 enoyl-CoA hydratase/isomerase YP_001182927.1 1590413 D 319224 CDS YP_001182928.1 146292504 5080597 1591717..1592619 1 NC_009438.1 KEGG: shm:Shewmr7_2659 3-hydroxyisobutyrate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 1592619 5080597 Sputcn32_1402 Shewanella putrefaciens CN-32 3-hydroxyisobutyrate dehydrogenase YP_001182928.1 1591717 D 319224 CDS YP_001182929.1 146292505 5079653 1592644..1593402 1 NC_009438.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1593402 fabG 5079653 fabG Shewanella putrefaciens CN-32 3-ketoacyl-ACP reductase YP_001182929.1 1592644 D 319224 CDS YP_001182930.1 146292506 5079655 1593874..1594116 1 NC_009438.1 KEGG: shm:Shewmr7_2657 hypothetical protein; hypothetical protein 1594116 5079655 Sputcn32_1405 Shewanella putrefaciens CN-32 hypothetical protein YP_001182930.1 1593874 D 319224 CDS YP_001182931.1 146292507 5079656 1594177..1596207 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; KEGG: she:Shewmr4_2589 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 1596207 5079656 Sputcn32_1406 Shewanella putrefaciens CN-32 peptidase S9 prolyl oligopeptidase YP_001182931.1 1594177 D 319224 CDS YP_001182932.1 146292508 5079657 complement(1596215..1596616) 1 NC_009438.1 PFAM: regulatory protein, MerR; KEGG: she:Shewmr4_2588 transcriptional regulator, MerR family; MerR family transcriptional regulator 1596616 5079657 Sputcn32_1407 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001182932.1 1596215 R 319224 CDS YP_001182933.1 146292509 5079658 1596747..1598981 1 NC_009438.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: she:Shewmr4_2587 copper-translocating P-type ATPase; copper-translocating P-type ATPase 1598981 5079658 Sputcn32_1408 Shewanella putrefaciens CN-32 copper-translocating P-type ATPase YP_001182933.1 1596747 D 319224 CDS YP_001182934.1 146292510 5079659 1599281..1600921 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_2653 ABC transporter related; ABC transporter-like protein 1600921 5079659 Sputcn32_1409 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182934.1 1599281 D 319224 CDS YP_001182935.1 146292511 5079660 complement(1601028..1601543) 1 NC_009438.1 PFAM: Lipocalin-related protein and Bos/Can/Equ allergen; Lipocalin family protein; KEGG: son:SO1691 lipoprotein Blc; lipocalin family protein 1601543 5079660 Sputcn32_1410 Shewanella putrefaciens CN-32 lipocalin family protein YP_001182935.1 1601028 R 319224 CDS YP_001182936.1 146292512 5079661 complement(1601732..1604407) 1 NC_009438.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: shm:Shewmr7_2650 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 1604407 5079661 Sputcn32_1411 Shewanella putrefaciens CN-32 FAD linked oxidase domain-containing protein YP_001182936.1 1601732 R 319224 CDS YP_001182937.1 146292513 5079662 complement(1604514..1605533) 1 NC_009438.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: she:Shewmr4_2582 diguanylate cyclase; PAS/PAC sensor-containing diguanylate cyclase 1605533 5079662 Sputcn32_1412 Shewanella putrefaciens CN-32 PAS/PAC sensor-containing diguanylate cyclase YP_001182937.1 1604514 R 319224 CDS YP_001182938.1 146292514 5079664 complement(1606607..1606981) 1 NC_009438.1 KEGG: she:Shewmr4_2581 hypothetical protein; hypothetical protein 1606981 5079664 Sputcn32_1414 Shewanella putrefaciens CN-32 hypothetical protein YP_001182938.1 1606607 R 319224 CDS YP_001182939.1 146292515 5079665 complement(1607003..1610281) 1 NC_009438.1 PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; KEGG: shm:Shewmr7_2647 transcriptional regulator, CadC; transcriptional regulator CadC 1610281 5079665 Sputcn32_1415 Shewanella putrefaciens CN-32 transcriptional regulator CadC YP_001182939.1 1607003 R 319224 CDS YP_001182940.1 146292516 5079666 complement(1610679..1612007) 1 NC_009438.1 KEGG: son:SO1700 hypothetical protein; hypothetical protein 1612007 5079666 Sputcn32_1416 Shewanella putrefaciens CN-32 hypothetical protein YP_001182940.1 1610679 R 319224 CDS YP_001182941.1 146292517 5079667 complement(1612019..1612882) 1 NC_009438.1 KEGG: shm:Shewmr7_2645 hypothetical protein; hypothetical protein 1612882 5079667 Sputcn32_1417 Shewanella putrefaciens CN-32 hypothetical protein YP_001182941.1 1612019 R 319224 CDS YP_001182942.1 146292518 5079668 1613381..1613728 1 NC_009438.1 KEGG: shm:Shewmr7_2644 hypothetical protein; hypothetical protein 1613728 5079668 Sputcn32_1418 Shewanella putrefaciens CN-32 hypothetical protein YP_001182942.1 1613381 D 319224 CDS YP_001182943.1 146292519 5079669 1613914..1614612 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_2643 transcriptional regulator, TetR family; TetR family transcriptional regulator 1614612 5079669 Sputcn32_1419 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001182943.1 1613914 D 319224 CDS YP_001182944.1 146292520 5079670 1614612..1615610 1 NC_009438.1 PFAM: secretion protein HlyD family protein; KEGG: she:Shewmr4_2575 secretion protein HlyD family protein; secretion protein HlyD family protein 1615610 5079670 Sputcn32_1420 Shewanella putrefaciens CN-32 secretion protein HlyD family protein YP_001182944.1 1614612 D 319224 CDS YP_001182945.1 146292521 5079671 1615607..1616560 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: she:Shewmr4_2574 ABC transporter related; ABC transporter-like protein 1616560 5079671 Sputcn32_1421 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182945.1 1615607 D 319224 CDS YP_001182946.1 146292522 5079672 1616550..1617671 1 NC_009438.1 PFAM: ABC-2 type transporter; KEGG: shm:Shewmr7_2640 ABC-2 type transporter; ABC transporter 1617671 5079672 Sputcn32_1422 Shewanella putrefaciens CN-32 ABC transporter YP_001182946.1 1616550 D 319224 CDS YP_001182947.1 146292523 5079673 1617936..1619222 1 NC_009438.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: son:SO1708 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase 1619222 5079673 Sputcn32_1423 Shewanella putrefaciens CN-32 acetyl-CoA hydrolase/transferase YP_001182947.1 1617936 D 319224 CDS YP_001182948.1 146292524 5079674 1619408..1619881 1 NC_009438.1 KEGG: son:SO1710 hypothetical protein; hypothetical protein 1619881 5079674 Sputcn32_1424 Shewanella putrefaciens CN-32 hypothetical protein YP_001182948.1 1619408 D 319224 CDS YP_001182949.1 146292525 5079675 1620004..1620534 1 NC_009438.1 KEGG: son:SO1711 hypothetical protein; hypothetical protein 1620534 5079675 Sputcn32_1425 Shewanella putrefaciens CN-32 hypothetical protein YP_001182949.1 1620004 D 319224 CDS YP_001182950.1 146292526 5079676 1620857..1622761 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ppu:PP_5020 methyl-accepting chemotaxis transducer; methyl-accepting chemotaxis sensory transducer 1622761 5079676 Sputcn32_1426 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182950.1 1620857 D 319224 CDS YP_001182951.1 146292527 5079677 complement(1622862..1623350) 1 NC_009438.1 hypothetical protein 1623350 5079677 Sputcn32_1427 Shewanella putrefaciens CN-32 hypothetical protein YP_001182951.1 1622862 R 319224 CDS YP_001182952.1 146292528 5079678 complement(1623423..1623977) 1 NC_009438.1 PFAM: protein of unknown function DUF1415; KEGG: shm:Shewmr7_2635 protein of unknown function DUF1415; hypothetical protein 1623977 5079678 Sputcn32_1428 Shewanella putrefaciens CN-32 hypothetical protein YP_001182952.1 1623423 R 319224 CDS YP_001182953.1 146292529 5079679 complement(1624004..1624597) 1 NC_009438.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: shm:Shewmr7_2634 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1624597 5079679 Sputcn32_1429 Shewanella putrefaciens CN-32 lysine exporter protein LysE/YggA YP_001182953.1 1624004 R 319224 CDS YP_001182954.1 146292530 5079680 1625047..1625445 1 NC_009438.1 KEGG: shm:Shewmr7_2632 hypothetical protein; hypothetical protein 1625445 5079680 Sputcn32_1430 Shewanella putrefaciens CN-32 hypothetical protein YP_001182954.1 1625047 D 319224 CDS YP_001182955.1 146292531 5079681 complement(1625567..1626139) 1 NC_009438.1 hypothetical protein 1626139 5079681 Sputcn32_1431 Shewanella putrefaciens CN-32 hypothetical protein YP_001182955.1 1625567 R 319224 CDS YP_001182956.1 146292532 5079682 complement(1626454..1627278) 1 NC_009438.1 KEGG: shm:Shewmr7_2631 hypothetical protein; hypothetical protein 1627278 5079682 Sputcn32_1432 Shewanella putrefaciens CN-32 hypothetical protein YP_001182956.1 1626454 R 319224 CDS YP_001182957.1 146292533 5079683 complement(1627537..1628037) 1 NC_009438.1 PFAM: amino acid-binding ACT domain protein; KEGG: son:SO1722 ACT domain protein; amino acid-binding ACT domain-containing protein 1628037 5079683 Sputcn32_1433 Shewanella putrefaciens CN-32 amino acid-binding ACT domain-containing protein YP_001182957.1 1627537 R 319224 CDS YP_001182958.1 146292534 5079684 1628236..1630494 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_2627 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1630494 5079684 Sputcn32_1434 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001182958.1 1628236 D 319224 CDS YP_001182959.1 146292535 5079685 1630554..1632212 1 NC_009438.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: she:Shewmr4_2559 phosphate ABC transporter, inner membrane subunit PstA; phosphate ABC transporter permease 1632212 5079685 Sputcn32_1435 Shewanella putrefaciens CN-32 phosphate ABC transporter permease YP_001182959.1 1630554 D 319224 CDS YP_001182960.1 146292536 5079686 1632246..1633064 1 NC_009438.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 1633064 5079686 Sputcn32_1436 Shewanella putrefaciens CN-32 phosphate transporter ATP-binding protein YP_001182960.1 1632246 D 319224 CDS YP_001182961.1 146292537 5079687 1633138..1633848 1 NC_009438.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 1633848 5079687 Sputcn32_1437 Shewanella putrefaciens CN-32 transcriptional regulator PhoU YP_001182961.1 1633138 D 319224 CDS YP_001182962.1 146292538 5079688 1634393..1636015 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: ilo:IL0610 methyl-accepting chemotaxis protein (contains HAMP domain); methyl-accepting chemotaxis sensory transducer 1636015 5079688 Sputcn32_1438 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001182962.1 1634393 D 319224 CDS YP_001182963.1 146292539 5079689 complement(1636231..1636626) 1 NC_009438.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO1734 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 1636626 5079689 Sputcn32_1439 Shewanella putrefaciens CN-32 glyoxalase/bleomycin resistance protein/dioxygenase YP_001182963.1 1636231 R 319224 CDS YP_001182964.1 146292540 5079690 1636787..1637371 1 NC_009438.1 KEGG: son:SO1736 hypothetical protein; hypothetical protein 1637371 5079690 Sputcn32_1440 Shewanella putrefaciens CN-32 hypothetical protein YP_001182964.1 1636787 D 319224 CDS YP_001182965.1 146292541 5079691 1637766..1639742 1 NC_009438.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: she:Shewmr4_2552 choline/carnitine/betaine transporter; choline/carnitine/betaine transporter 1639742 5079691 Sputcn32_1441 Shewanella putrefaciens CN-32 choline/carnitine/betaine transporter YP_001182965.1 1637766 D 319224 CDS YP_001182966.1 146292542 5079692 1639878..1640240 1 NC_009438.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: son:SO1738 hypothetical protein; hypothetical protein 1640240 5079692 Sputcn32_1442 Shewanella putrefaciens CN-32 hypothetical protein YP_001182966.1 1639878 D 319224 CDS YP_001182967.1 146292543 5079693 complement(1640261..1640494) 1 NC_009438.1 PFAM: protein of unknown function DUF1289; KEGG: shm:Shewmr7_2617 protein of unknown function DUF1289; hypothetical protein 1640494 5079693 Sputcn32_1443 Shewanella putrefaciens CN-32 hypothetical protein YP_001182967.1 1640261 R 319224 CDS YP_001182968.1 146292544 5079694 1640711..1642009 1 NC_009438.1 KEGG: son:SO1741 hypothetical protein; hypothetical protein 1642009 5079694 Sputcn32_1444 Shewanella putrefaciens CN-32 hypothetical protein YP_001182968.1 1640711 D 319224 CDS YP_001182969.1 146292545 5079695 1642262..1643311 1 NC_009438.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1643311 5079695 Sputcn32_1445 Shewanella putrefaciens CN-32 3-oxoacyl-ACP synthase YP_001182969.1 1642262 D 319224 CDS YP_001182970.1 146292546 5079696 1643408..1644319 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; KEGG: she:Shewmr4_2547 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 1644319 5079696 Sputcn32_1446 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001182970.1 1643408 D 319224 CDS YP_001182971.1 146292547 5079697 1644319..1646145 1 NC_009438.1 Catalyzes the specific recognition and activation of amino acids during peptide synthesis; peptide synthase 1646145 5079697 Sputcn32_1447 Shewanella putrefaciens CN-32 peptide synthase YP_001182971.1 1644319 D 319224 CDS YP_001182972.1 146292548 5079698 1646295..1647422 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KEGG: shm:Shewmr7_2612 3-beta hydroxysteroid dehydrogenase/isomerase; 3-beta hydroxysteroid dehydrogenase/isomerase 1647422 5079698 Sputcn32_1448 Shewanella putrefaciens CN-32 3-beta hydroxysteroid dehydrogenase/isomerase YP_001182972.1 1646295 D 319224 CDS YP_001182973.1 146292549 5079699 complement(1647462..1649225) 1 NC_009438.1 KEGG: pfo:Pfl_2272 hypothetical protein; hypothetical protein 1649225 5079699 Sputcn32_1449 Shewanella putrefaciens CN-32 hypothetical protein YP_001182973.1 1647462 R 319224 CDS YP_001182974.1 146292550 5079700 1649533..1649781 1 NC_009438.1 KEGG: shm:Shewmr7_2611 hypothetical protein; hypothetical protein 1649781 5079700 Sputcn32_1450 Shewanella putrefaciens CN-32 hypothetical protein YP_001182974.1 1649533 D 319224 CDS YP_001182975.1 146292551 5079701 1650049..1651035 1 NC_009438.1 PFAM: Integral membrane protein TerC; KEGG: son:SO1747 membrane protein, putative; integral membrane protein TerC 1651035 5079701 Sputcn32_1451 Shewanella putrefaciens CN-32 integral membrane protein TerC YP_001182975.1 1650049 D 319224 CDS YP_001182976.1 146292552 5079702 1651524..1652402 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1750 ABC transporter, ATP-binding protein; ABC transporter-like protein 1652402 5079702 Sputcn32_1452 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001182976.1 1651524 D 319224 CDS YP_001182977.1 146292553 5079605 1652415..1655972 1 NC_009438.1 KEGG: son:SO1751 hypothetical protein; hypothetical protein 1655972 5079605 Sputcn32_1453 Shewanella putrefaciens CN-32 hypothetical protein YP_001182977.1 1652415 D 319224 CDS YP_001182978.1 146292554 5079606 1656145..1657866 1 NC_009438.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: she:Shewmr4_2541 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/subunit 1657866 5079606 Sputcn32_1454 Shewanella putrefaciens CN-32 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_001182978.1 1656145 D 319224 CDS YP_001182979.1 146292555 5079607 1658041..1658424 1 NC_009438.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: shm:Shewmr7_2607 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1658424 5079607 Sputcn32_1455 Shewanella putrefaciens CN-32 glyoxalase/bleomycin resistance protein/dioxygenase YP_001182979.1 1658041 D 319224 CDS YP_001182980.1 146292556 5079608 1658511..1658975 1 NC_009438.1 PFAM: transcription activator, effector binding; KEGG: son:SO1757 hypothetical protein; transcription activator, effector binding 1658975 5079608 Sputcn32_1456 Shewanella putrefaciens CN-32 transcription activator, effector binding YP_001182980.1 1658511 D 319224 CDS YP_001182981.1 146292557 5079609 1659028..1659705 1 NC_009438.1 PFAM: Helix-turn-helix, type 11 domain protein; KEGG: she:Shewmr4_2538 helix-turn-helix, type 11 domain protein; helix-turn-helix, type 11 domain-containing protein 1659705 5079609 Sputcn32_1457 Shewanella putrefaciens CN-32 helix-turn-helix, type 11 domain-containing protein YP_001182981.1 1659028 D 319224 CDS YP_001182982.1 146292558 5079610 complement(1659685..1659987) 1 NC_009438.1 PFAM: branched-chain amino acid transport; KEGG: she:Shewmr4_2529 branched-chain amino acid transport; branched-chain amino acid transport 1659987 5079610 Sputcn32_1458 Shewanella putrefaciens CN-32 branched-chain amino acid transport YP_001182982.1 1659685 R 319224 CDS YP_001182983.1 146292559 5079611 complement(1659984..1660865) 1 NC_009438.1 PFAM: AzlC family protein; KEGG: she:Shewmr4_2528 AzlC family protein; AzlC family protein 1660865 5079611 Sputcn32_1459 Shewanella putrefaciens CN-32 AzlC family protein YP_001182983.1 1659984 R 319224 CDS YP_001182984.1 146292560 5079612 complement(1660994..1661830) 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO1762 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator 1661830 5079612 Sputcn32_1460 Shewanella putrefaciens CN-32 AraC family transcriptional regulator YP_001182984.1 1660994 R 319224 CDS YP_001182985.1 146292561 5079613 complement(1662019..1662675) 1 NC_009438.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: son:SO1763 streptogramin A acetyl transferase; hexapaptide repeat-containing transferase 1662675 5079613 Sputcn32_1461 Shewanella putrefaciens CN-32 hexapaptide repeat-containing transferase YP_001182985.1 1662019 R 319224 CDS YP_001182986.1 146292562 5079614 complement(1662706..1663221) 1 NC_009438.1 PFAM: protein of unknown function DUF1706; KEGG: son:SO1764 hypothetical protein; hypothetical protein 1663221 5079614 Sputcn32_1462 Shewanella putrefaciens CN-32 hypothetical protein YP_001182986.1 1662706 R 319224 CDS YP_001182987.1 146292563 5079615 complement(1663279..1663638) 1 NC_009438.1 KEGG: son:SO1765 hypothetical protein; hypothetical protein 1663638 5079615 Sputcn32_1463 Shewanella putrefaciens CN-32 hypothetical protein YP_001182987.1 1663279 R 319224 CDS YP_001182988.1 146292564 5079616 1663793..1664752 1 NC_009438.1 KEGG: cps:CPS_2655 hypothetical protein; hypothetical protein 1664752 5079616 Sputcn32_1464 Shewanella putrefaciens CN-32 hypothetical protein YP_001182988.1 1663793 D 319224 CDS YP_001182989.1 146292565 5079617 complement(1665128..1665943) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vpa:VP1787 putative transposase; integrase catalytic subunit 1665943 5079617 Sputcn32_1465 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001182989.1 1665128 R 319224 CDS YP_001182990.1 146292566 5079618 complement(1665994..1666278) 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vpa:VP1788 putative transposase; transposase IS3/IS911 family protein 1666278 5079618 Sputcn32_1466 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001182990.1 1665994 R 319224 CDS YP_001182991.1 146292567 5079619 complement(1666241..1666498) 1 NC_009438.1 KEGG: son:SO1765 hypothetical protein; hypothetical protein 1666498 5079619 Sputcn32_1467 Shewanella putrefaciens CN-32 hypothetical protein YP_001182991.1 1666241 R 319224 CDS YP_001182992.1 146292568 5079620 complement(1666827..1669565) 1 NC_009438.1 KEGG: mxa:MXAN_2894 hypothetical protein; hypothetical protein 1669565 5079620 Sputcn32_1468 Shewanella putrefaciens CN-32 hypothetical protein YP_001182992.1 1666827 R 319224 CDS YP_001182993.1 146292569 5079621 complement(1670175..1671824) 1 NC_009438.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: she:Shewmr4_2520 pyridoxal-dependent decarboxylase; pyridoxal-dependent decarboxylase 1671824 5079621 Sputcn32_1469 Shewanella putrefaciens CN-32 pyridoxal-dependent decarboxylase YP_001182993.1 1670175 R 319224 CDS YP_001182994.1 146292570 5079622 complement(1672058..1673242) 1 NC_009438.1 PFAM: glycerate kinase; KEGG: shm:Shewmr7_2587 glycerate kinase; glycerate kinase 1673242 5079622 Sputcn32_1470 Shewanella putrefaciens CN-32 glycerate kinase YP_001182994.1 1672058 R 319224 CDS YP_001182995.1 146292571 5079623 complement(1673302..1674660) 1 NC_009438.1 PFAM: Gluconate transporter; Citrate transporter; KEGG: shm:Shewmr7_2586 gluconate transporter; gluconate transporter 1674660 5079623 Sputcn32_1471 Shewanella putrefaciens CN-32 gluconate transporter YP_001182995.1 1673302 R 319224 CDS YP_001182996.1 146292572 5079624 complement(1674956..1675963) 1 NC_009438.1 PFAM: Catalase domain protein; KEGG: she:Shewmr4_2517 catalase domain protein; catalase domain-containing protein 1675963 5079624 Sputcn32_1472 Shewanella putrefaciens CN-32 catalase domain-containing protein YP_001182996.1 1674956 R 319224 CDS YP_001182997.1 146292573 5079625 complement(1676088..1677329) 1 NC_009438.1 PFAM: sugar diacid recognition domain protein; KEGG: shm:Shewmr7_2584 transcriptional regulator, CdaR; transcriptional regulator CdaR 1677329 5079625 Sputcn32_1473 Shewanella putrefaciens CN-32 transcriptional regulator CdaR YP_001182997.1 1676088 R 319224 CDS YP_001182998.1 146292574 5079626 complement(1677338..1678024) 1 NC_009438.1 KEGG: shm:Shewmr7_2582 phage SPO1 DNA polymerase domain protein; phage SPO1 DNA polymerase domain-containing protein 1678024 5079626 Sputcn32_1474 Shewanella putrefaciens CN-32 phage SPO1 DNA polymerase domain-containing protein YP_001182998.1 1677338 R 319224 CDS YP_001182999.1 146292575 5079627 complement(1678057..1678662) 1 NC_009438.1 KEGG: she:Shewmr4_2513 hypothetical protein; hypothetical protein 1678662 5079627 Sputcn32_1475 Shewanella putrefaciens CN-32 hypothetical protein YP_001182999.1 1678057 R 319224 CDS YP_001183000.1 146292576 5079628 complement(1678847..1680961) 1 NC_009438.1 KEGG: son:SO1776 outer membrane protein precursor MtrB; outer membrane protein MtrB 1680961 5079628 Sputcn32_1476 Shewanella putrefaciens CN-32 outer membrane protein MtrB YP_001183000.1 1678847 R 319224 CDS YP_001183001.1 146292577 5079629 complement(1680974..1681978) 1 NC_009438.1 TIGRFAM: cytochrome C family protein; KEGG: son:SO1777 decaheme cytochrome c MtrA; cytochrome C family protein 1681978 5079629 Sputcn32_1477 Shewanella putrefaciens CN-32 cytochrome C family protein YP_001183001.1 1680974 R 319224 CDS YP_001183002.1 146292578 5079630 complement(1682048..1684039) 1 NC_009438.1 KEGG: shm:Shewmr7_2578 decaheme cytochrome c; decaheme cytochrome c 1684039 5079630 Sputcn32_1478 Shewanella putrefaciens CN-32 decaheme cytochrome c YP_001183002.1 1682048 R 319224 CDS YP_001183003.1 146292579 5079631 complement(1684430..1686931) 1 NC_009438.1 KEGG: son:SO1779 decaheme cytochrome c; hypothetical protein 1686931 5079631 Sputcn32_1479 Shewanella putrefaciens CN-32 hypothetical protein YP_001183003.1 1684430 R 319224 CDS YP_001183004.1 146292580 5079632 1687770..1688009 1 NC_009438.1 PFAM: FeoA family protein; KEGG: shm:Shewmr7_2573 FeoA family protein; FeoA family protein 1688009 5079632 Sputcn32_1480 Shewanella putrefaciens CN-32 FeoA family protein YP_001183004.1 1687770 D 319224 CDS YP_001183005.1 146292581 5079633 1688002..1690296 1 NC_009438.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: son:SO1784 ferrous iron transport protein B; ferrous iron transport protein B 1690296 5079633 Sputcn32_1481 Shewanella putrefaciens CN-32 ferrous iron transport protein B YP_001183005.1 1688002 D 319224 CDS YP_001183006.1 146292582 5079634 1690487..1692157 1 NC_009438.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1692157 5079634 Sputcn32_1482 Shewanella putrefaciens CN-32 glutaminyl-tRNA synthetase YP_001183006.1 1690487 D 319224 CDS YP_001183007.1 146292583 5079635 complement(1692257..1692853) 1 NC_009438.1 PFAM: protein of unknown function DUF1282; KEGG: she:Shewmr4_2502 protein of unknown function DUF1282; hypothetical protein 1692853 5079635 Sputcn32_1483 Shewanella putrefaciens CN-32 hypothetical protein YP_001183007.1 1692257 R 319224 CDS YP_001183008.1 146292584 5079636 1693091..1693900 1 NC_009438.1 PFAM: tRNA--hydroxylase; KEGG: she:Shewmr4_2501 tRNA--hydroxylase; tRNA--hydroxylase 1693900 5079636 Sputcn32_1484 Shewanella putrefaciens CN-32 tRNA--hydroxylase YP_001183008.1 1693091 D 319224 CDS YP_001183009.1 146292585 5079637 complement(1693971..1694696) 1 NC_009438.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 1694696 5079637 Sputcn32_1485 Shewanella putrefaciens CN-32 UDP-2,3-diacylglucosamine hydrolase YP_001183009.1 1693971 R 319224 CDS YP_001183010.1 146292586 5079638 complement(1694706..1695200) 1 NC_009438.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: son:SO1790 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase 1695200 5079638 Sputcn32_1486 Shewanella putrefaciens CN-32 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001183010.1 1694706 R 319224 CDS YP_001183011.1 146292587 5079639 1695335..1696720 1 NC_009438.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1696720 cysS 5079639 cysS Shewanella putrefaciens CN-32 cysteinyl-tRNA synthetase YP_001183011.1 1695335 D 319224 CDS YP_001183012.1 146292588 5079640 complement(1696856..1697710) 1 NC_009438.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1697710 5079640 Sputcn32_1488 Shewanella putrefaciens CN-32 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_001183012.1 1696856 R 319224 CDS YP_001183013.1 146292589 5079644 1698687..1699991 1 NC_009438.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1699991 tig 5079644 tig Shewanella putrefaciens CN-32 trigger factor YP_001183013.1 1698687 D 319224 CDS YP_001183014.1 146292590 5079645 1700081..1700689 1 NC_009438.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1700689 clpP 5079645 clpP Shewanella putrefaciens CN-32 ATP-dependent Clp protease proteolytic subunit YP_001183014.1 1700081 D 319224 CDS YP_001183015.1 146292591 5079646 1700775..1702055 1 NC_009438.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1702055 clpX 5079646 clpX Shewanella putrefaciens CN-32 ATP-dependent protease ATP-binding subunit ClpX YP_001183015.1 1700775 D 319224 CDS YP_001183016.1 146292592 5079647 1702188..1704545 1 NC_009438.1 KEGG: shm:Shewmr7_2561 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16, lon domain protein; AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent protease La 1704545 5079647 Sputcn32_1492 Shewanella putrefaciens CN-32 ATP-dependent protease La YP_001183016.1 1702188 D 319224 CDS YP_001183017.1 146292593 5079648 1704805..1705077 1 NC_009438.1 PFAM: histone family protein DNA-binding protein; KEGG: shm:Shewmr7_2560 histone family protein DNA-binding protein; histone family protein DNA-binding protein 1705077 5079648 Sputcn32_1493 Shewanella putrefaciens CN-32 histone family protein DNA-binding protein YP_001183017.1 1704805 D 319224 CDS YP_001183018.1 146292594 5079649 1705305..1707161 1 NC_009438.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: she:Shewmr4_2491 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1707161 5079649 Sputcn32_1494 Shewanella putrefaciens CN-32 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001183018.1 1705305 D 319224 CDS YP_001183019.1 146292595 5079650 complement(1707744..1708949) 1 NC_009438.1 enzyme from Treponema denticola exhibits NADH-dependent trans-2-enoyl-CoA reductase activity; trans-2-enoyl-CoA reductase 1708949 5079650 Sputcn32_1495 Shewanella putrefaciens CN-32 trans-2-enoyl-CoA reductase YP_001183019.1 1707744 R 319224 CDS YP_001183020.1 146292596 5079651 complement(1709055..1709840) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1801 peptide ABC transporter, ATP-binding protein; ABC transporter-like protein 1709840 5079651 Sputcn32_1496 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001183020.1 1709055 R 319224 CDS YP_001183021.1 146292597 5079652 complement(1709821..1710828) 1 NC_009438.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; KEGG: shm:Shewmr7_2555 oligopeptide/dipeptide ABC transporter, ATPase subunit; oligopeptide/dipeptide ABC transporter ATPase 1710828 5079652 Sputcn32_1497 Shewanella putrefaciens CN-32 oligopeptide/dipeptide ABC transporter ATPase YP_001183021.1 1709821 R 319224 CDS YP_001183022.1 146292598 5079556 complement(1710832..1711722) 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_2554 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1711722 5079556 Sputcn32_1498 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001183022.1 1710832 R 319224 CDS YP_001183023.1 146292599 5079557 complement(1711709..1712740) 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: she:Shewmr4_2485 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 1712740 5079557 Sputcn32_1499 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001183023.1 1711709 R 319224 CDS YP_001183024.1 146292600 5079558 complement(1712740..1714365) 1 NC_009438.1 PFAM: extracellular solute-binding protein, family 5; KEGG: shm:Shewmr7_2552 extracellular solute-binding protein, family 5; extracellular solute-binding protein 1714365 5079558 Sputcn32_1500 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001183024.1 1712740 R 319224 CDS YP_001183025.1 146292601 5079559 complement(1714435..1715523) 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: shm:Shewmr7_2551 transcriptional regulator, fis family; Fis family transcriptional regulator 1715523 5079559 Sputcn32_1501 Shewanella putrefaciens CN-32 Fis family transcriptional regulator YP_001183025.1 1714435 R 319224 CDS YP_001183026.1 146292602 5079560 1715701..1716384 1 NC_009438.1 PFAM: PspA/IM30 family protein; KEGG: son:SO1807 phage shock protein A; phage shock protein A, PspA 1716384 5079560 Sputcn32_1502 Shewanella putrefaciens CN-32 phage shock protein A, PspA YP_001183026.1 1715701 D 319224 CDS YP_001183027.1 146292603 5079561 1716408..1716641 1 NC_009438.1 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B 1716641 pspB 5079561 pspB Shewanella putrefaciens CN-32 phage shock protein B YP_001183027.1 1716408 D 319224 CDS YP_001183028.1 146292604 5079562 1716628..1717014 1 NC_009438.1 PFAM: PspC domain protein; KEGG: shm:Shewmr7_2548 phage shock protein C, PspC; phage shock protein C, PspC 1717014 5079562 Sputcn32_1504 Shewanella putrefaciens CN-32 phage shock protein C, PspC YP_001183028.1 1716628 D 319224 CDS YP_001183029.1 146292605 5079563 1717096..1718568 1 NC_009438.1 PFAM: protein of unknown function DUF463, YcjX family protein; KEGG: shm:Shewmr7_2547 protein of unknown function DUF463, YcjX family protein; hypothetical protein 1718568 5079563 Sputcn32_1505 Shewanella putrefaciens CN-32 hypothetical protein YP_001183029.1 1717096 D 319224 CDS YP_001183030.1 146292606 5079564 1718565..1719797 1 NC_009438.1 PFAM: conserved hypothetical protein 1620; KEGG: she:Shewmr4_2478 conserved hypothetical protein 1620; hypothetical protein 1719797 5079564 Sputcn32_1506 Shewanella putrefaciens CN-32 hypothetical protein YP_001183030.1 1718565 D 319224 CDS YP_001183031.1 146292607 5079565 1720141..1721334 1 NC_009438.1 KEGG: she:Shewmr4_2477 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent enzymes; aromatic amino acid beta-eliminating lyase/threonine aldolase; methionine gamma-lyase 1721334 5079565 Sputcn32_1507 Shewanella putrefaciens CN-32 methionine gamma-lyase YP_001183031.1 1720141 D 319224 CDS YP_001183032.1 146292608 5079566 1721560..1721943 1 NC_009438.1 KEGG: shm:Shewmr7_2544 competence protein ComEA helix-hairpin-helix repeat protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding, class 1; helix-hairpin-helix repeat-containing competence protein ComEA 1721943 5079566 Sputcn32_1508 Shewanella putrefaciens CN-32 helix-hairpin-helix repeat-containing competence protein ComEA YP_001183032.1 1721560 D 319224 CDS YP_001183033.1 146292609 5079568 complement(1722371..1722661) 1 NC_009438.1 KEGG: son:SO1814 hypothetical protein; hypothetical protein 1722661 5079568 Sputcn32_1509 Shewanella putrefaciens CN-32 hypothetical protein YP_001183033.1 1722371 R 319224 CDS YP_001183034.1 146292610 5079569 complement(1722960..1723664) 1 NC_009438.1 KEGG: she:Shewmr4_2473 hypothetical protein; hypothetical protein 1723664 5079569 Sputcn32_1510 Shewanella putrefaciens CN-32 hypothetical protein YP_001183034.1 1722960 R 319224 CDS YP_001183035.1 146292611 5079570 complement(1723674..1724336) 1 NC_009438.1 KEGG: she:Shewmr4_2472 primosomal replication protein N'', putative; primosomal replication protein N'' 1724336 5079570 Sputcn32_1511 Shewanella putrefaciens CN-32 primosomal replication protein N'' YP_001183035.1 1723674 R 319224 CDS YP_001183036.1 146292612 5079571 complement(1724333..1725106) 1 NC_009438.1 PFAM: protein of unknown function DUF81; KEGG: shm:Shewmr7_2539 protein of unknown function DUF81; hypothetical protein 1725106 5079571 Sputcn32_1512 Shewanella putrefaciens CN-32 hypothetical protein YP_001183036.1 1724333 R 319224 CDS YP_001183037.1 146292613 5079572 complement(1725116..1727188) 1 NC_009438.1 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 1727188 dinG 5079572 dinG Shewanella putrefaciens CN-32 ATP-dependent DNA helicase DinG YP_001183037.1 1725116 R 319224 CDS YP_001183038.1 146292614 5079573 1727288..1729681 1 NC_009438.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 1729681 5079573 Sputcn32_1514 Shewanella putrefaciens CN-32 DNA polymerase II YP_001183038.1 1727288 D 319224 CDS YP_001183039.1 146292615 5079574 1729902..1731110 1 NC_009438.1 PFAM: porin, Gram-negative type; KEGG: she:Shewmr4_2468 porin, gram-negative type; porin 1731110 5079574 Sputcn32_1515 Shewanella putrefaciens CN-32 porin YP_001183039.1 1729902 D 319224 CDS YP_001183040.1 146292616 5079575 1731880..1734681 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO1822 TonB-dependent receptor, putative; TonB-dependent receptor 1734681 5079575 Sputcn32_1516 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183040.1 1731880 D 319224 CDS YP_001183041.1 146292617 5079576 1735113..1735895 1 NC_009438.1 KEGG: shm:Shewmr7_2534 hypothetical protein; hypothetical protein 1735895 5079576 Sputcn32_1517 Shewanella putrefaciens CN-32 hypothetical protein YP_001183041.1 1735113 D 319224 CDS YP_001183042.1 146292618 5079577 1735895..1737250 1 NC_009438.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: shm:Shewmr7_2533 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1737250 5079577 Sputcn32_1518 Shewanella putrefaciens CN-32 MotA/TolQ/ExbB proton channel YP_001183042.1 1735895 D 319224 CDS YP_001183043.1 146292619 5079578 1737250..1737777 1 NC_009438.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: she:Shewmr4_2462 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1737777 5079578 Sputcn32_1519 Shewanella putrefaciens CN-32 MotA/TolQ/ExbB proton channel YP_001183043.1 1737250 D 319224 CDS YP_001183044.1 146292620 5079579 1737791..1738195 1 NC_009438.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: shm:Shewmr7_2531 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1738195 5079579 Sputcn32_1520 Shewanella putrefaciens CN-32 biopolymer transport protein ExbD/TolR YP_001183044.1 1737791 D 319224 CDS YP_001183045.1 146292621 5079580 1738197..1738817 1 NC_009438.1 TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: shm:Shewmr7_2530 TonB family protein; TonB family protein 1738817 5079580 Sputcn32_1521 Shewanella putrefaciens CN-32 TonB family protein YP_001183045.1 1738197 D 319224 CDS YP_001183046.1 146292622 5079581 1738820..1740064 1 NC_009438.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: shm:Shewmr7_2529 TPR repeat-containing protein; hypothetical protein 1740064 5079581 Sputcn32_1522 Shewanella putrefaciens CN-32 hypothetical protein YP_001183046.1 1738820 D 319224 CDS YP_001183047.1 146292623 5079582 complement(1740132..1740641) 1 NC_009438.1 PFAM: GGDEF domain containing protein; KEGG: son:SO1830 GGDEF domain protein; diguanylate cyclase 1740641 5079582 Sputcn32_1523 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001183047.1 1740132 R 319224 CDS YP_001183048.1 146292624 5079583 1740721..1742550 1 NC_009438.1 PFAM: protein of unknown function DUF885; KEGG: she:Shewmr4_2457 protein of unknown function DUF885; hypothetical protein 1742550 5079583 Sputcn32_1524 Shewanella putrefaciens CN-32 hypothetical protein YP_001183048.1 1740721 D 319224 CDS YP_001183049.1 146292625 5079584 1742728..1743006 1 NC_009438.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: shm:Shewmr7_2526 PpiC-type peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 1743006 5079584 Sputcn32_1525 Shewanella putrefaciens CN-32 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001183049.1 1742728 D 319224 CDS YP_001183050.1 146292626 5079585 1743074..1743610 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1834 acetyltransferase, GNAT family; N-acetyltransferase GCN5 1743610 5079585 Sputcn32_1526 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183050.1 1743074 D 319224 CDS YP_001183051.1 146292627 5079586 1743765..1744004 1 NC_009438.1 KEGG: shm:Shewmr7_2524 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1744004 5079586 Sputcn32_1527 Shewanella putrefaciens CN-32 RNA-binding S4 domain-containing protein YP_001183051.1 1743765 D 319224 CDS YP_001183052.1 146292628 5079587 1744027..1744416 1 NC_009438.1 PFAM: protein of unknown function DUF1260; KEGG: son:SO1836 hypothetical protein; hypothetical protein 1744416 5079587 Sputcn32_1528 Shewanella putrefaciens CN-32 hypothetical protein YP_001183052.1 1744027 D 319224 CDS YP_001183053.1 146292629 5079588 complement(1744611..1745516) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_2522 transcriptional regulator, LysR family; LysR family transcriptional regulator 1745516 5079588 Sputcn32_1529 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183053.1 1744611 R 319224 CDS YP_001183054.1 146292630 5079589 1745674..1746447 1 NC_009438.1 PFAM: protein of unknown function DUF81; KEGG: son:SO2846 hypothetical protein; hypothetical protein 1746447 5079589 Sputcn32_1530 Shewanella putrefaciens CN-32 hypothetical protein YP_001183054.1 1745674 D 319224 CDS YP_001183055.1 146292631 5079590 1746830..1747975 1 NC_009438.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: shm:Shewmr7_2520 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 1747975 5079590 Sputcn32_1531 Shewanella putrefaciens CN-32 nuclease SbcCD subunit D YP_001183055.1 1746830 D 319224 CDS YP_001183056.1 146292632 5079591 1747972..1751028 1 NC_009438.1 PFAM: SMC domain protein; KEGG: she:Shewmr4_2449 SMC domain protein; SMC domain-containing protein 1751028 5079591 Sputcn32_1532 Shewanella putrefaciens CN-32 SMC domain-containing protein YP_001183056.1 1747972 D 319224 CDS YP_001183057.1 146292633 5079592 1751294..1752589 1 NC_009438.1 PFAM: peptidase M23B; Opacity-associated protein A; KEGG: shm:Shewmr7_2518 peptidase M23B; peptidase M23B 1752589 5079592 Sputcn32_1533 Shewanella putrefaciens CN-32 peptidase M23B YP_001183057.1 1751294 D 319224 CDS YP_001183058.1 146292634 5079593 complement(1752914..1753384) 1 NC_009438.1 KEGG: son:SO2841 hypothetical protein; hypothetical protein 1753384 5079593 Sputcn32_1534 Shewanella putrefaciens CN-32 hypothetical protein YP_001183058.1 1752914 R 319224 CDS YP_001183059.1 146292635 5079594 complement(1753482..1753991) 1 NC_009438.1 PFAM: protein of unknown function DUF45; KEGG: son:SO2840 hypothetical protein; hypothetical protein 1753991 5079594 Sputcn32_1535 Shewanella putrefaciens CN-32 hypothetical protein YP_001183059.1 1753482 R 319224 CDS YP_001183060.1 146292636 5079595 complement(1754033..1754470) 1 NC_009438.1 KEGG: son:SO2839 hypothetical protein; hypothetical protein 1754470 5079595 Sputcn32_1536 Shewanella putrefaciens CN-32 hypothetical protein YP_001183060.1 1754033 R 319224 CDS YP_001183061.1 146292637 5079596 complement(1754610..1755959) 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: she:Shewmr4_2444 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 1755959 5079596 Sputcn32_1537 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001183061.1 1754610 R 319224 CDS YP_001183062.1 146292638 5079597 1756206..1757168 1 NC_009438.1 PFAM: Patatin; KEGG: son:SO2836 hypothetical protein; patatin 1757168 5079597 Sputcn32_1538 Shewanella putrefaciens CN-32 patatin YP_001183062.1 1756206 D 319224 CDS YP_001183063.1 146292639 5079598 1757255..1757944 1 NC_009438.1 KEGG: shm:Shewmr7_2512 hypothetical protein; hypothetical protein 1757944 5079598 Sputcn32_1539 Shewanella putrefaciens CN-32 hypothetical protein YP_001183063.1 1757255 D 319224 CDS YP_001183064.1 146292640 5079599 1758212..1760329 1 NC_009438.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1760329 5079599 Sputcn32_1540 Shewanella putrefaciens CN-32 anaerobic ribonucleoside triphosphate reductase YP_001183064.1 1758212 D 319224 CDS YP_001183065.1 146292641 5079600 1760445..1760906 1 NC_009438.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 1760906 nrdG 5079600 nrdG Shewanella putrefaciens CN-32 anaerobic ribonucleotide reductase-activating protein YP_001183065.1 1760445 D 319224 CDS YP_001183066.1 146292642 5079601 1761021..1761377 1 NC_009438.1 KEGG: she:Shewmr4_2439 hypothetical protein; hypothetical protein 1761377 5079601 Sputcn32_1542 Shewanella putrefaciens CN-32 hypothetical protein YP_001183066.1 1761021 D 319224 CDS YP_001183067.1 146292643 5079602 1761633..1762244 1 NC_009438.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1762244 ribA 5079602 ribA Shewanella putrefaciens CN-32 GTP cyclohydrolase II YP_001183067.1 1761633 D 319224 CDS YP_001183068.1 146292644 5079603 1762341..1763207 1 NC_009438.1 KEGG: son:SO2830 hypothetical protein; hypothetical protein 1763207 5079603 Sputcn32_1544 Shewanella putrefaciens CN-32 hypothetical protein YP_001183068.1 1762341 D 319224 CDS YP_001183069.1 146292645 5079604 complement(1763302..1763754) 1 NC_009438.1 KEGG: son:SO2829 hypothetical protein; hypothetical protein 1763754 5079604 Sputcn32_1545 Shewanella putrefaciens CN-32 hypothetical protein YP_001183069.1 1763302 R 319224 CDS YP_001183070.1 146292646 5079506 complement(1763907..1764275) 1 NC_009438.1 KEGG: she:Shewmr4_2434 hypothetical protein; hypothetical protein 1764275 5079506 Sputcn32_1546 Shewanella putrefaciens CN-32 hypothetical protein YP_001183070.1 1763907 R 319224 CDS YP_001183071.1 146292647 5079507 complement(1764414..1765862) 1 NC_009438.1 PFAM: carbon starvation protein CstA; KEGG: she:Shewmr4_2433 carbon starvation protein CstA; carbon starvation protein CstA 1765862 5079507 Sputcn32_1547 Shewanella putrefaciens CN-32 carbon starvation protein CstA YP_001183071.1 1764414 R 319224 CDS YP_001183072.1 146292648 5079508 complement(1766025..1766735) 1 NC_009438.1 unknown function; when overproduced it confers drug-resistance; putative two-component response-regulatory protein YehT 1766735 5079508 Sputcn32_1548 Shewanella putrefaciens CN-32 putative two-component response-regulatory protein YehT YP_001183072.1 1766025 R 319224 CDS YP_001183073.1 146292649 5079509 complement(1766732..1768414) 1 NC_009438.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; histidine kinase internal region; 5TM Receptors of the LytS-YhcK type, transmembrane region; KEGG: son:SO2822 sensor histidine kinase; signal transduction histidine kinase LytS 1768414 5079509 Sputcn32_1549 Shewanella putrefaciens CN-32 signal transduction histidine kinase LytS YP_001183073.1 1766732 R 319224 CDS YP_001183074.1 146292650 5079510 1768543..1768785 1 NC_009438.1 KEGG: shm:Shewmr7_2500 hypothetical protein; hypothetical protein 1768785 5079510 Sputcn32_1550 Shewanella putrefaciens CN-32 hypothetical protein YP_001183074.1 1768543 D 319224 CDS YP_001183075.1 146292651 5079511 complement(1768870..1769211) 1 NC_009438.1 KEGG: shm:Shewmr7_2499 RepA domain protein; RepA domain-containing protein 1769211 5079511 Sputcn32_1551 Shewanella putrefaciens CN-32 RepA domain-containing protein YP_001183075.1 1768870 R 319224 CDS YP_001183076.1 146292652 5079512 complement(1769198..1769866) 1 NC_009438.1 KEGG: son:SO2808 hypothetical protein; hypothetical protein 1769866 5079512 Sputcn32_1552 Shewanella putrefaciens CN-32 hypothetical protein YP_001183076.1 1769198 R 319224 CDS YP_001183077.1 146292653 5079513 complement(1769944..1770246) 1 NC_009438.1 PFAM: type IV pilus assembly PilZ; KEGG: shm:Shewmr7_2497 type IV pilus assembly PilZ; type IV pilus assembly PilZ 1770246 5079513 Sputcn32_1553 Shewanella putrefaciens CN-32 type IV pilus assembly PilZ YP_001183077.1 1769944 R 319224 CDS YP_001183078.1 146292654 5079514 complement(1770401..1770805) 1 NC_009438.1 PFAM: phosphate-starvation-inducible E; KEGG: shm:Shewmr7_2496 phosphate-starvation-inducible E; phosphate-starvation-inducible E 1770805 5079514 Sputcn32_1554 Shewanella putrefaciens CN-32 phosphate-starvation-inducible E YP_001183078.1 1770401 R 319224 CDS YP_001183079.1 146292655 5079515 complement(1771089..1771598) 1 NC_009438.1 KEGG: shm:Shewmr7_2494 hypothetical protein; hypothetical protein 1771598 5079515 Sputcn32_1555 Shewanella putrefaciens CN-32 hypothetical protein YP_001183079.1 1771089 R 319224 CDS YP_001183080.1 146292656 5079516 1771630..1773954 1 NC_009438.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: shm:Shewmr7_2493 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 1773954 5079516 Sputcn32_1556 Shewanella putrefaciens CN-32 DNA internalization-related competence protein ComEC/Rec2 YP_001183080.1 1771630 D 319224 CDS YP_001183081.1 146292657 5079517 1773987..1775795 1 NC_009438.1 KEGG: son:SO2802 ABC transporter, ATP-binding protein MsbA; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1775795 5079517 Sputcn32_1557 Shewanella putrefaciens CN-32 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_001183081.1 1773987 D 319224 CDS YP_001183082.1 146292658 5079518 1775796..1776809 1 NC_009438.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 1776809 lpxK 5079518 lpxK Shewanella putrefaciens CN-32 tetraacyldisaccharide 4'-kinase YP_001183082.1 1775796 D 319224 CDS YP_001183083.1 146292659 5079519 1776796..1776975 1 NC_009438.1 PFAM: protein of unknown function DUF343; KEGG: son:SO2800 hypothetical protein; hypothetical protein 1776975 5079519 Sputcn32_1559 Shewanella putrefaciens CN-32 hypothetical protein YP_001183083.1 1776796 D 319224 CDS YP_001183084.1 146292660 5079520 complement(1777036..1777500) 1 NC_009438.1 KEGG: son:SO2799 lipoprotein, putative; putative lipoprotein 1777500 5079520 Sputcn32_1560 Shewanella putrefaciens CN-32 putative lipoprotein YP_001183084.1 1777036 R 319224 CDS YP_001183085.1 146292661 5079521 1777651..1778340 1 NC_009438.1 KEGG: she:Shewmr4_2418 hypothetical protein; hypothetical protein 1778340 5079521 Sputcn32_1561 Shewanella putrefaciens CN-32 hypothetical protein YP_001183085.1 1777651 D 319224 CDS YP_001183086.1 146292662 5079522 complement(1778398..1778754) 1 NC_009438.1 PFAM: glutaredoxin; Glutathione S-transferase, N-terminal domain; KEGG: shm:Shewmr7_2487 glutaredoxin; glutaredoxin 1778754 5079522 Sputcn32_1562 Shewanella putrefaciens CN-32 glutaredoxin YP_001183086.1 1778398 R 319224 CDS YP_001183087.1 146292663 5079523 complement(1779045..1782308) 1 NC_009438.1 PFAM: protein of unknown function DUF748; KEGG: she:Shewmr4_2416 protein of unknown function DUF748; hypothetical protein 1782308 5079523 Sputcn32_1563 Shewanella putrefaciens CN-32 hypothetical protein YP_001183087.1 1779045 R 319224 CDS YP_001183088.1 146292664 5079524 complement(1782544..1782924) 1 NC_009438.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: son:SO2795 glyoxalase family protein; glyoxalase/bleomycin resistance protein/dioxygenase 1782924 5079524 Sputcn32_1564 Shewanella putrefaciens CN-32 glyoxalase/bleomycin resistance protein/dioxygenase YP_001183088.1 1782544 R 319224 CDS YP_001183089.1 146292665 5079525 1783296..1784000 1 NC_009438.1 KEGG: she:Shewmr4_2414 hypothetical protein; hypothetical protein 1784000 5079525 Sputcn32_1565 Shewanella putrefaciens CN-32 hypothetical protein YP_001183089.1 1783296 D 319224 CDS YP_001183090.1 146292666 5079526 1784102..1784452 1 NC_009438.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: she:Shewmr4_2413 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase 1784452 5079526 Sputcn32_1566 Shewanella putrefaciens CN-32 glyoxalase/bleomycin resistance protein/dioxygenase YP_001183090.1 1784102 D 319224 CDS YP_001183091.1 146292667 5079527 1784427..1784639 1 NC_009438.1 PFAM: protein of unknown function DUF1289; KEGG: son:SO2792 hypothetical protein; hypothetical protein 1784639 5079527 Sputcn32_1567 Shewanella putrefaciens CN-32 hypothetical protein YP_001183091.1 1784427 D 319224 CDS YP_001183092.1 146292668 5079528 complement(1784679..1785569) 1 NC_009438.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 1785569 5079528 Sputcn32_1568 Shewanella putrefaciens CN-32 cytidine deaminase YP_001183092.1 1784679 R 319224 CDS YP_001183093.1 146292669 5079529 complement(1785735..1787147) 1 NC_009438.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 1787147 sbcB 5079529 sbcB Shewanella putrefaciens CN-32 exonuclease I YP_001183093.1 1785735 R 319224 CDS YP_001183094.1 146292670 5079530 1787326..1788126 1 NC_009438.1 KEGG: son:SO2789 hypothetical protein; hypothetical protein 1788126 5079530 Sputcn32_1570 Shewanella putrefaciens CN-32 hypothetical protein YP_001183094.1 1787326 D 319224 CDS YP_001183095.1 146292671 5079531 1788167..1788982 1 NC_009438.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase A 1788982 rrmA 5079531 rrmA Shewanella putrefaciens CN-32 23S rRNA methyltransferase A YP_001183095.1 1788167 D 319224 CDS YP_001183096.1 146292672 5079532 1789282..1789491 1 NC_009438.1 PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; KEGG: shm:Shewmr7_2477 cold-shock DNA-binding domain protein; cold-shock DNA-binding domain-containing protein 1789491 5079532 Sputcn32_1572 Shewanella putrefaciens CN-32 cold-shock DNA-binding domain-containing protein YP_001183096.1 1789282 D 319224 CDS YP_001183097.1 146292673 5079533 complement(1790320..1793706) 1 NC_009438.1 TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; KEGG: she:Shewmr4_2405 ribonuclease, Rne/Rng family; ribonuclease 1793706 5079533 Sputcn32_1573 Shewanella putrefaciens CN-32 ribonuclease YP_001183097.1 1790320 R 319224 CDS YP_001183098.1 146292674 5079534 1794215..1795207 1 NC_009438.1 KEGG: shm:Shewmr7_2474 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; RluA family pseudouridine synthase 1795207 5079534 Sputcn32_1574 Shewanella putrefaciens CN-32 RluA family pseudouridine synthase YP_001183098.1 1794215 D 319224 CDS YP_001183099.1 146292675 5079535 1795230..1795946 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: she:Shewmr4_2403 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 1795946 5079535 Sputcn32_1575 Shewanella putrefaciens CN-32 HAD family hydrolase YP_001183099.1 1795230 D 319224 CDS YP_001183100.1 146292676 5079536 complement(1796110..1796724) 1 NC_009438.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: son:SO2782 maf protein, putative; maf protein 1796724 5079536 Sputcn32_1576 Shewanella putrefaciens CN-32 maf protein YP_001183100.1 1796110 R 319224 CDS YP_001183101.1 146292677 5079537 1796957..1797481 1 NC_009438.1 PFAM: protein of unknown function DUF177; KEGG: shm:Shewmr7_2471 protein of unknown function DUF177; hypothetical protein 1797481 5079537 Sputcn32_1577 Shewanella putrefaciens CN-32 hypothetical protein YP_001183101.1 1796957 D 319224 CDS YP_001183102.1 146292678 5079538 1797499..1797669 1 NC_009438.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1797669 rpmF 5079538 rpmF Shewanella putrefaciens CN-32 50S ribosomal protein L32 YP_001183102.1 1797499 D 319224 CDS YP_001183103.1 146292679 5079539 1797685..1798713 1 NC_009438.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 1798713 5079539 Sputcn32_1579 Shewanella putrefaciens CN-32 putative glycerol-3-phosphate acyltransferase PlsX YP_001183103.1 1797685 D 319224 CDS YP_001183104.1 146292680 5079540 1798723..1799682 1 NC_009438.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1799682 5079540 Sputcn32_1580 Shewanella putrefaciens CN-32 3-oxoacyl-ACP synthase YP_001183104.1 1798723 D 319224 CDS YP_001183105.1 146292681 5079541 1799770..1800696 1 NC_009438.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: acyl transferase domain protein; KEGG: shm:Shewmr7_2467 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1800696 5079541 Sputcn32_1581 Shewanella putrefaciens CN-32 malonyl CoA-acyl carrier protein transacylase YP_001183105.1 1799770 D 319224 CDS YP_001183106.1 146292682 5079542 1800706..1801452 1 NC_009438.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: son:SO2776 3-oxoacyl-[acyl-carrier protein] reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1801452 5079542 Sputcn32_1582 Shewanella putrefaciens CN-32 3-oxoacyl-(acyl-carrier-protein) reductase YP_001183106.1 1800706 D 319224 CDS YP_001183107.1 146292683 5079543 1801617..1801850 1 NC_009438.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1801850 acpP 5079543 acpP Shewanella putrefaciens CN-32 acyl carrier protein YP_001183107.1 1801617 D 319224 CDS YP_001183108.1 146292684 5079544 1802076..1803314 1 NC_009438.1 PFAM: beta-ketoacyl synthase; KEGG: son:SO2774 3-oxoacyl-(acyl-carrier-protein) synthase II; beta-ketoacyl synthase 1803314 5079544 Sputcn32_1584 Shewanella putrefaciens CN-32 beta-ketoacyl synthase YP_001183108.1 1802076 D 319224 CDS YP_001183109.1 146292685 5079545 1803478..1803846 1 NC_009438.1 KEGG: shm:Shewmr7_2463 hypothetical protein; hypothetical protein 1803846 5079545 Sputcn32_1585 Shewanella putrefaciens CN-32 hypothetical protein YP_001183109.1 1803478 D 319224 CDS YP_001183110.1 146292686 5079546 1803965..1804444 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_2462 thioesterase superfamily protein; thioesterase superfamily protein 1804444 5079546 Sputcn32_1586 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001183110.1 1803965 D 319224 CDS YP_001183111.1 146292687 5079547 1804752..1805627 1 NC_009438.1 PFAM: oxidoreductase domain protein; NADP oxidoreductase, coenzyme F420-dependent; 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: she:Shewmr4_2391 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase 1805627 5079547 Sputcn32_1587 Shewanella putrefaciens CN-32 6-phosphogluconate dehydrogenase YP_001183111.1 1804752 D 319224 CDS YP_001183112.1 146292688 5079548 complement(1805746..1806594) 1 NC_009438.1 PFAM: Aldose 1-epimerase; KEGG: shm:Shewmr7_2460 aldose 1-epimerase; aldose 1-epimerase 1806594 5079548 Sputcn32_1588 Shewanella putrefaciens CN-32 aldose 1-epimerase YP_001183112.1 1805746 R 319224 CDS YP_001183113.1 146292689 5079549 1806842..1808632 1 NC_009438.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: she:Shewmr4_2387 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 1808632 5079549 Sputcn32_1589 Shewanella putrefaciens CN-32 acyl-CoA dehydrogenase domain-containing protein YP_001183113.1 1806842 D 319224 CDS YP_001183114.1 146292690 5079550 1808942..1811155 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_2386 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 1811155 5079550 Sputcn32_1590 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001183114.1 1808942 D 319224 CDS YP_001183115.1 146292691 5079551 1811398..1812549 1 NC_009438.1 PFAM: Patatin; KEGG: she:Shewmr4_2385 patatin; patatin 1812549 5079551 Sputcn32_1591 Shewanella putrefaciens CN-32 patatin YP_001183115.1 1811398 D 319224 CDS YP_001183116.1 146292692 5079552 complement(1812741..1814405) 1 NC_009438.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 1814405 asnB 5079552 asnB Shewanella putrefaciens CN-32 asparagine synthetase B YP_001183116.1 1812741 R 319224 CDS YP_001183117.1 146292693 5079553 complement(1814988..1816661) 1 NC_009438.1 PFAM: peptidase M28; KEGG: shm:Shewmr7_2455 peptidase M28; peptidase M28 1816661 5079553 Sputcn32_1593 Shewanella putrefaciens CN-32 peptidase M28 YP_001183117.1 1814988 R 319224 CDS YP_001183118.1 146292694 5079554 complement(1816862..1817608) 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: son:SO2762 nagD protein; UMP phosphatase 1817608 5079554 Sputcn32_1594 Shewanella putrefaciens CN-32 UMP phosphatase YP_001183118.1 1816862 R 319224 CDS YP_001183119.1 146292695 5079555 complement(1817765..1818409) 1 NC_009438.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 1818409 purN 5079555 purN Shewanella putrefaciens CN-32 phosphoribosylglycinamide formyltransferase YP_001183119.1 1817765 R 319224 CDS YP_001183120.1 146292696 5079412 complement(1818409..1819446) 1 NC_009438.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1819446 5079412 Sputcn32_1596 Shewanella putrefaciens CN-32 phosphoribosylaminoimidazole synthetase YP_001183120.1 1818409 R 319224 CDS YP_001183121.1 146292697 5079413 1819779..1820405 1 NC_009438.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1820405 upp 5079413 upp Shewanella putrefaciens CN-32 uracil phosphoribosyltransferase YP_001183121.1 1819779 D 319224 CDS YP_001183122.1 146292698 5079414 complement(1820531..1821850) 1 NC_009438.1 PFAM: Gluconate transporter; Na+/H+ antiporter NhaC; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: son:SO2757 membrane protein, putative; Na+/H+ antiporter NhaC 1821850 5079414 Sputcn32_1598 Shewanella putrefaciens CN-32 Na+/H+ antiporter NhaC YP_001183122.1 1820531 R 319224 CDS YP_001183123.1 146292699 5079415 1822237..1822842 1 NC_009438.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shm:Shewmr7_2448 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1822842 5079415 Sputcn32_1599 Shewanella putrefaciens CN-32 alkyl hydroperoxide reductase YP_001183123.1 1822237 D 319224 CDS YP_001183124.1 146292700 5079416 complement(1822925..1823599) 1 NC_009438.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 1823599 5079416 Sputcn32_1600 Shewanella putrefaciens CN-32 ribonuclease T YP_001183124.1 1822925 R 319224 CDS YP_001183125.1 146292701 5079417 1823742..1824611 1 NC_009438.1 PFAM: OmpA/MotB domain protein; KEGG: she:Shewmr4_2374 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 1824611 5079417 Sputcn32_1601 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001183125.1 1823742 D 319224 CDS YP_001183126.1 146292702 5079418 1825167..1827356 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: shm:Shewmr7_2445 prolyl oligopeptidase; prolyl oligopeptidase 1827356 5079418 Sputcn32_1602 Shewanella putrefaciens CN-32 prolyl oligopeptidase YP_001183126.1 1825167 D 319224 CDS YP_001183127.1 146292703 5079419 1827526..1827927 1 NC_009438.1 TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_2444 4-hydroxybenzoyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 1827927 5079419 Sputcn32_1603 Shewanella putrefaciens CN-32 4-hydroxybenzoyl-CoA thioesterase YP_001183127.1 1827526 D 319224 CDS YP_001183128.1 146292704 5079420 1827917..1828603 1 NC_009438.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: shm:Shewmr7_2443 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 1828603 5079420 Sputcn32_1604 Shewanella putrefaciens CN-32 MotA/TolQ/ExbB proton channel YP_001183128.1 1827917 D 319224 CDS YP_001183129.1 146292705 5079421 1828603..1829037 1 NC_009438.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: she:Shewmr4_2370 biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 1829037 5079421 Sputcn32_1605 Shewanella putrefaciens CN-32 biopolymer transport protein ExbD/TolR YP_001183129.1 1828603 D 319224 CDS YP_001183130.1 146292706 5079422 1829038..1830027 1 NC_009438.1 PFAM: TolA family protein; KEGG: she:Shewmr4_2369 TolA family protein; TolA family protein 1830027 5079422 Sputcn32_1606 Shewanella putrefaciens CN-32 TolA family protein YP_001183130.1 1829038 D 319224 CDS YP_001183131.1 146292707 5079423 1830037..1831365 1 NC_009438.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1831365 tolB 5079423 tolB Shewanella putrefaciens CN-32 translocation protein TolB YP_001183131.1 1830037 D 319224 CDS YP_001183132.1 146292708 5079424 1831412..1831948 1 NC_009438.1 TIGRFAM: OmpA domain protein; PFAM: OmpA/MotB domain protein; KEGG: shm:Shewmr7_2439 OmpA/MotB domain protein; OmpA domain-containing protein 1831948 5079424 Sputcn32_1608 Shewanella putrefaciens CN-32 OmpA domain-containing protein YP_001183132.1 1831412 D 319224 CDS YP_001183133.1 146292709 5079425 1831973..1832722 1 NC_009438.1 TIGRFAM: Tetratricopeptide domain protein; KEGG: shm:Shewmr7_2438 hypothetical protein; hypothetical protein 1832722 5079425 Sputcn32_1609 Shewanella putrefaciens CN-32 hypothetical protein YP_001183133.1 1831973 D 319224 CDS YP_001183134.1 146292710 5079432 complement(1833636..1834391) 1 NC_009438.1 KEGG: shm:Shewmr7_1590 hypothetical protein; hypothetical protein 1834391 5079432 Sputcn32_1610 Shewanella putrefaciens CN-32 hypothetical protein YP_001183134.1 1833636 R 319224 CDS YP_001183135.1 146292711 5079433 complement(1834595..1836661) 1 NC_009438.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 1836661 cpdB 5079433 cpdB Shewanella putrefaciens CN-32 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_001183135.1 1834595 R 319224 CDS YP_001183136.1 146292712 5079434 1837369..1839513 1 NC_009438.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: shm:Shewmr7_1592 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 1839513 5079434 Sputcn32_1612 Shewanella putrefaciens CN-32 peptidyl-dipeptidase Dcp YP_001183136.1 1837369 D 319224 CDS YP_001183137.1 146292713 5079435 1839732..1840355 1 NC_009438.1 SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: shm:Shewmr7_1593 prolyl 4-hydroxylase, alpha subunit; prolyl 4-hydroxylase subunit alpha 1840355 5079435 Sputcn32_1613 Shewanella putrefaciens CN-32 prolyl 4-hydroxylase subunit alpha YP_001183137.1 1839732 D 319224 CDS YP_001183138.1 146292714 5079436 1840709..1841311 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_1594 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1841311 5079436 Sputcn32_1614 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183138.1 1840709 D 319224 CDS YP_001183139.1 146292715 5079437 1841344..1841808 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_1595 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1841808 5079437 Sputcn32_1615 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183139.1 1841344 D 319224 CDS YP_001183140.1 146292716 5079438 1841846..1842241 1 NC_009438.1 KEGG: shm:Shewmr7_1596 hypothetical protein; hypothetical protein 1842241 5079438 Sputcn32_1616 Shewanella putrefaciens CN-32 hypothetical protein YP_001183140.1 1841846 D 319224 CDS YP_001183141.1 146292717 5079439 1842397..1842795 1 NC_009438.1 KEGG: shm:Shewmr7_1597 hypothetical protein; hypothetical protein 1842795 5079439 Sputcn32_1617 Shewanella putrefaciens CN-32 hypothetical protein YP_001183141.1 1842397 D 319224 CDS YP_001183142.1 146292718 5079440 complement(1842808..1843614) 1 NC_009438.1 KEGG: son:SO1839 hypothetical protein; hypothetical protein 1843614 5079440 Sputcn32_1618 Shewanella putrefaciens CN-32 hypothetical protein YP_001183142.1 1842808 R 319224 CDS YP_001183143.1 146292719 5079441 1843751..1844842 1 NC_009438.1 KEGG: son:SO1840 hypothetical protein; hypothetical protein 1844842 5079441 Sputcn32_1619 Shewanella putrefaciens CN-32 hypothetical protein YP_001183143.1 1843751 D 319224 CDS YP_001183144.1 146292720 5079442 1844829..1845992 1 NC_009438.1 KEGG: shm:Shewmr7_1599 hypothetical protein; hypothetical protein 1845992 5079442 Sputcn32_1620 Shewanella putrefaciens CN-32 hypothetical protein YP_001183144.1 1844829 D 319224 CDS YP_001183145.1 146292721 5079443 1845992..1846507 1 NC_009438.1 KEGG: shm:Shewmr7_1600 hypothetical protein; hypothetical protein 1846507 5079443 Sputcn32_1621 Shewanella putrefaciens CN-32 hypothetical protein YP_001183145.1 1845992 D 319224 CDS YP_001183146.1 146292722 5079444 1846801..1849635 1 NC_009438.1 PFAM: PKD domain containing protein; Endonuclease/exonuclease/phosphatase; KEGG: son:SO1844 extracellular nuclease, putative; endonuclease/exonuclease/phosphatase 1849635 5079444 Sputcn32_1622 Shewanella putrefaciens CN-32 endonuclease/exonuclease/phosphatase YP_001183146.1 1846801 D 319224 CDS YP_001183147.1 146292723 5079445 1849955..1850212 1 NC_009438.1 hypothetical protein 1850212 5079445 Sputcn32_1623 Shewanella putrefaciens CN-32 hypothetical protein YP_001183147.1 1849955 D 319224 CDS YP_001183148.1 146292724 5079446 1850457..1851164 1 NC_009438.1 PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO2528 site-specific recombinase, phage integrase family; phage integrase family protein 1851164 5079446 Sputcn32_1624 Shewanella putrefaciens CN-32 phage integrase family protein YP_001183148.1 1850457 D 319224 CDS YP_001183149.1 146292725 5079447 1851299..1852360 1 NC_009438.1 PFAM: putative transposase; KEGG: son:SO2212 transposase, IS91 family, putative; putative transposase 1852360 5079447 Sputcn32_1625 Shewanella putrefaciens CN-32 putative transposase YP_001183149.1 1851299 D 319224 CDS YP_001183150.1 146292726 5079448 1853530..1853895 1 NC_009438.1 hypothetical protein 1853895 5079448 Sputcn32_1626 Shewanella putrefaciens CN-32 hypothetical protein YP_001183150.1 1853530 D 319224 CDS YP_001183151.1 146292727 5079449 1854700..1855092 1 NC_009438.1 KEGG: son:SO1845 hypothetical protein; hypothetical protein 1855092 5079449 Sputcn32_1627 Shewanella putrefaciens CN-32 hypothetical protein YP_001183151.1 1854700 D 319224 CDS YP_001183152.1 146292728 5079450 complement(1855290..1856186) 1 NC_009438.1 KEGG: shm:Shewmr7_1603 hypothetical protein; hypothetical protein 1856186 5079450 Sputcn32_1628 Shewanella putrefaciens CN-32 hypothetical protein YP_001183152.1 1855290 R 319224 CDS YP_001183153.1 146292729 5079451 complement(1856198..1856956) 1 NC_009438.1 KEGG: she:Shewmr4_1537 hypothetical protein; hypothetical protein 1856956 5079451 Sputcn32_1629 Shewanella putrefaciens CN-32 hypothetical protein YP_001183153.1 1856198 R 319224 CDS YP_001183154.1 146292730 5079452 complement(1856956..1857486) 1 NC_009438.1 KEGG: son:SO1849 hypothetical protein; hypothetical protein 1857486 5079452 Sputcn32_1630 Shewanella putrefaciens CN-32 hypothetical protein YP_001183154.1 1856956 R 319224 CDS YP_001183155.1 146292731 5079453 complement(1857509..1857793) 1 NC_009438.1 PFAM: heat shock protein DnaJ domain protein; KEGG: son:SO1850 DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1857793 5079453 Sputcn32_1631 Shewanella putrefaciens CN-32 heat shock protein DnaJ domain-containing protein YP_001183155.1 1857509 R 319224 CDS YP_001183156.1 146292732 5079374 1859003..1861132 1 NC_009438.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 1861132 rlmL 5079374 rlmL Shewanella putrefaciens CN-32 23S rRNA m(2)G2445 methyltransferase YP_001183156.1 1859003 D 319224 CDS YP_001183157.1 146292733 5079375 1861125..1861388 1 NC_009438.1 PFAM: glutaredoxin 2; KEGG: she:Shewmr4_1541 glutaredoxin 2; glutaredoxin 1861388 5079375 Sputcn32_1633 Shewanella putrefaciens CN-32 glutaredoxin YP_001183157.1 1861125 D 319224 CDS YP_001183158.1 146292734 5079376 1861390..1863315 1 NC_009438.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1863315 5079376 Sputcn32_1634 Shewanella putrefaciens CN-32 ABC transporter ATPase YP_001183158.1 1861390 D 319224 CDS YP_001183159.1 146292735 5079377 1863344..1865173 1 NC_009438.1 KEGG: shm:Shewmr7_1610 hypothetical protein; hypothetical protein 1865173 5079377 Sputcn32_1635 Shewanella putrefaciens CN-32 hypothetical protein YP_001183159.1 1863344 D 319224 CDS YP_001183160.1 146292736 5079378 1865360..1865536 1 NC_009438.1 PFAM: ribosome modulation factor; KEGG: shm:Shewmr7_1611 ribosome modulation factor; ribosome modulation factor 1865536 5079378 Sputcn32_1636 Shewanella putrefaciens CN-32 ribosome modulation factor YP_001183160.1 1865360 D 319224 CDS YP_001183161.1 146292737 5079379 complement(1865643..1866158) 1 NC_009438.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1866158 5079379 Sputcn32_1637 Shewanella putrefaciens CN-32 3-hydroxydecanoyl-ACP dehydratase YP_001183161.1 1865643 R 319224 CDS YP_001183162.1 146292738 5079380 complement(1866233..1867966) 1 NC_009438.1 KEGG: shm:Shewmr7_1613 conserved hypothetical ATP-dependent protease; ATP-dependent protease 1867966 5079380 Sputcn32_1638 Shewanella putrefaciens CN-32 ATP-dependent protease YP_001183162.1 1866233 R 319224 CDS YP_001183163.1 146292739 5079383 1869104..1869784 1 NC_009438.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 1869784 5079383 Sputcn32_1639 Shewanella putrefaciens CN-32 response regulator YP_001183163.1 1869104 D 319224 CDS YP_001183164.1 146292740 5079384 1869851..1871680 1 NC_009438.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1871680 uvrC 5079384 uvrC Shewanella putrefaciens CN-32 excinuclease ABC subunit C YP_001183164.1 1869851 D 319224 CDS YP_001183165.1 146292741 5079385 1871728..1872276 1 NC_009438.1 KEGG: she:Shewmr4_1549 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1872276 5079385 Sputcn32_1641 Shewanella putrefaciens CN-32 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001183165.1 1871728 D 319224 CDS YP_001183166.1 146292742 5079390 complement(1873595..1874521) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1865 ABC transporter, ATP-binding protein; ABC transporter-like protein 1874521 5079390 Sputcn32_1642 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001183166.1 1873595 R 319224 CDS YP_001183167.1 146292743 5079391 complement(1874518..1875348) 1 NC_009438.1 KEGG: son:SO1866 hypothetical protein; hypothetical protein 1875348 5079391 Sputcn32_1643 Shewanella putrefaciens CN-32 hypothetical protein YP_001183167.1 1874518 R 319224 CDS YP_001183168.1 146292744 5079392 complement(1875421..1876086) 1 NC_009438.1 PFAM: protein of unknown function DUF480; KEGG: son:SO1867 hypothetical protein; hypothetical protein 1876086 5079392 Sputcn32_1644 Shewanella putrefaciens CN-32 hypothetical protein YP_001183168.1 1875421 R 319224 CDS YP_001183169.1 146292745 5079393 complement(1876212..1877054) 1 NC_009438.1 KEGG: she:Shewmr4_1555 hypothetical protein; hypothetical protein 1877054 5079393 Sputcn32_1645 Shewanella putrefaciens CN-32 hypothetical protein YP_001183169.1 1876212 R 319224 CDS YP_001183170.1 146292746 5079394 1877602..1877754 1 NC_009438.1 KEGG: shm:Shewmr7_1631 hypothetical protein; hypothetical protein 1877754 5079394 Sputcn32_1646 Shewanella putrefaciens CN-32 hypothetical protein YP_001183170.1 1877602 D 319224 CDS YP_001183171.1 146292747 5079395 1878226..1880139 1 NC_009438.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1880139 5079395 Sputcn32_1647 Shewanella putrefaciens CN-32 arginine decarboxylase YP_001183171.1 1878226 D 319224 CDS YP_001183172.1 146292748 5079396 1880269..1881240 1 NC_009438.1 PFAM: S-adenosylmethionine decarboxylase; KEGG: son:SO1871 S-adenosylmethionine decarboxylase proenzyme, putative; adenosylmethionine decarboxylase 1881240 5079396 Sputcn32_1648 Shewanella putrefaciens CN-32 adenosylmethionine decarboxylase YP_001183172.1 1880269 D 319224 CDS YP_001183173.1 146292749 5079397 1881429..1882067 1 NC_009438.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 1882067 5079397 Sputcn32_1649 Shewanella putrefaciens CN-32 pyridoxamine 5'-phosphate oxidase YP_001183173.1 1881429 D 319224 CDS YP_001183174.1 146292750 5079398 1882182..1882649 1 NC_009438.1 PFAM: protein of unknown function DUF188; KEGG: she:Shewmr4_1560 protein of unknown function DUF188; hypothetical protein 1882649 5079398 Sputcn32_1650 Shewanella putrefaciens CN-32 hypothetical protein YP_001183174.1 1882182 D 319224 CDS YP_001183175.1 146292751 5079399 1882770..1883345 1 NC_009438.1 PFAM: YceI family protein; KEGG: shm:Shewmr7_1636 YceI family protein; hypothetical protein 1883345 5079399 Sputcn32_1651 Shewanella putrefaciens CN-32 hypothetical protein YP_001183175.1 1882770 D 319224 CDS YP_001183176.1 146292752 5079400 1883523..1883876 1 NC_009438.1 KEGG: shm:Shewmr7_1637 hypothetical protein; hypothetical protein 1883876 5079400 Sputcn32_1652 Shewanella putrefaciens CN-32 hypothetical protein YP_001183176.1 1883523 D 319224 CDS YP_001183177.1 146292753 5079401 complement(1883973..1885751) 1 NC_009438.1 PFAM: peptidase M61 domain protein; KEGG: shm:Shewmr7_2385 peptidase M61 domain protein; peptidase M61 domain-containing protein 1885751 5079401 Sputcn32_1653 Shewanella putrefaciens CN-32 peptidase M61 domain-containing protein YP_001183177.1 1883973 R 319224 CDS YP_001183178.1 146292754 5079402 1885896..1886252 1 NC_009438.1 PFAM: histidine triad (HIT) protein; KEGG: shm:Shewmr7_2384 histidine triad (HIT) protein; histidine triad (HIT) protein 1886252 5079402 Sputcn32_1654 Shewanella putrefaciens CN-32 histidine triad (HIT) protein YP_001183178.1 1885896 D 319224 CDS YP_001183179.1 146292755 5079403 1886249..1887256 1 NC_009438.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_2383 uncharacterized domain 1; hypothetical protein 1887256 5079403 Sputcn32_1655 Shewanella putrefaciens CN-32 hypothetical protein YP_001183179.1 1886249 D 319224 CDS YP_001183180.1 146292756 5079404 1887390..1887785 1 NC_009438.1 PFAM: protein of unknown function DUF1425; KEGG: son:SO2720 hypothetical protein; hypothetical protein 1887785 5079404 Sputcn32_1656 Shewanella putrefaciens CN-32 hypothetical protein YP_001183180.1 1887390 D 319224 CDS YP_001183181.1 146292757 5079405 1888340..1889044 1 NC_009438.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 1889044 5079405 Sputcn32_1657 Shewanella putrefaciens CN-32 purine nucleoside phosphorylase YP_001183181.1 1888340 D 319224 CDS YP_001183182.1 146292758 5079406 1889095..1890249 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: son:SO2718 hypothetical protein; hypothetical protein 1890249 5079406 Sputcn32_1658 Shewanella putrefaciens CN-32 hypothetical protein YP_001183182.1 1889095 D 319224 CDS YP_001183183.1 146292759 5079407 complement(1890326..1891006) 1 NC_009438.1 PFAM: cyclic nucleotide-binding; KEGG: son:SO2717 cyclic nucleotide binding protein, putative; cyclic nucleotide-binding protein 1891006 5079407 Sputcn32_1659 Shewanella putrefaciens CN-32 cyclic nucleotide-binding protein YP_001183183.1 1890326 R 319224 CDS YP_001183184.1 146292760 5079408 1891411..1893600 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO2715 TonB-dependent receptor; TonB-dependent receptor 1893600 5079408 Sputcn32_1660 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183184.1 1891411 D 319224 CDS YP_001183185.1 146292761 5079409 1893703..1893963 1 NC_009438.1 KEGG: son:SO2714 hypothetical protein; hypothetical protein 1893963 5079409 Sputcn32_1661 Shewanella putrefaciens CN-32 hypothetical protein YP_001183185.1 1893703 D 319224 CDS YP_001183186.1 146292762 5079410 1893993..1894694 1 NC_009438.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: shm:Shewmr7_2378 nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1894694 5079410 Sputcn32_1662 Shewanella putrefaciens CN-32 nicotinamide mononucleotide transporter PnuC YP_001183186.1 1893993 D 319224 CDS YP_001183187.1 146292763 5079411 1894725..1895828 1 NC_009438.1 PFAM: aminoglycoside phosphotransferase; KEGG: son:SO2712 hypothetical protein; aminoglycoside phosphotransferase 1895828 5079411 Sputcn32_1663 Shewanella putrefaciens CN-32 aminoglycoside phosphotransferase YP_001183187.1 1894725 D 319224 CDS YP_001183188.1 146292764 5079322 1896027..1896908 1 NC_009438.1 KEGG: son:SO2711 hypothetical protein; hypothetical protein 1896908 5079322 Sputcn32_1664 Shewanella putrefaciens CN-32 hypothetical protein YP_001183188.1 1896027 D 319224 CDS YP_001183189.1 146292765 5079323 1897105..1897653 1 NC_009438.1 PFAM: nitroreductase; KEGG: shm:Shewmr7_2374 nitroreductase; nitroreductase 1897653 5079323 Sputcn32_1665 Shewanella putrefaciens CN-32 nitroreductase YP_001183189.1 1897105 D 319224 CDS YP_001183190.1 146292766 5079324 1897675..1898187 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_2373 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1898187 5079324 Sputcn32_1666 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183190.1 1897675 D 319224 CDS YP_001183191.1 146292767 5079325 complement(1898462..1900201) 1 NC_009438.1 KEGG: shm:Shewmr7_2369 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1900201 5079325 Sputcn32_1667 Shewanella putrefaciens CN-32 gamma-glutamyltransferase YP_001183191.1 1898462 R 319224 CDS YP_001183192.1 146292768 5079326 1900310..1901593 1 NC_009438.1 PFAM: protein of unknown function DUF482; KEGG: son:SO1953 hypothetical protein; hypothetical protein 1901593 5079326 Sputcn32_1668 Shewanella putrefaciens CN-32 hypothetical protein YP_001183192.1 1900310 D 319224 CDS YP_001183193.1 146292769 5079327 complement(1901668..1902291) 1 NC_009438.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: she:Shewmr4_2295 lysine exporter protein (LysE/YggA); lysine exporter protein LysE/YggA 1902291 5079327 Sputcn32_1669 Shewanella putrefaciens CN-32 lysine exporter protein LysE/YggA YP_001183193.1 1901668 R 319224 CDS YP_001183194.1 146292770 5079328 complement(1902453..1903493) 1 NC_009438.1 KEGG: son:SO1962 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 1903493 5079328 Sputcn32_1670 Shewanella putrefaciens CN-32 4-hydroxyphenylpyruvate dioxygenase YP_001183194.1 1902453 R 319224 CDS YP_001183195.1 146292771 5079329 complement(1903570..1904730) 1 NC_009438.1 PFAM: homogentisate 1,2-dioxygenase; KEGG: shm:Shewmr7_2363 homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygenase 1904730 5079329 Sputcn32_1671 Shewanella putrefaciens CN-32 homogentisate 1,2-dioxygenase YP_001183195.1 1903570 R 319224 CDS YP_001183196.1 146292772 5079330 1904923..1905837 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1965 transcriptional regulator, LysR family; LysR family transcriptional regulator 1905837 5079330 Sputcn32_1672 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183196.1 1904923 D 319224 CDS YP_001183197.1 146292773 5079331 1906038..1906832 1 NC_009438.1 PFAM: protein of unknown function DUF124; KEGG: she:Shewmr4_2289 protein of unknown function DUF124; hypothetical protein 1906832 5079331 Sputcn32_1673 Shewanella putrefaciens CN-32 hypothetical protein YP_001183197.1 1906038 D 319224 CDS YP_001183198.1 146292774 5079332 complement(1906927..1909782) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sfr:Sfri_2471 TonB-dependent receptor; TonB-dependent receptor 1909782 5079332 Sputcn32_1674 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183198.1 1906927 R 319224 CDS YP_001183199.1 146292775 5079333 complement(1910194..1911459) 1 NC_009438.1 KEGG: son:SO1967 hypothetical protein; hypothetical protein 1911459 5079333 Sputcn32_1675 Shewanella putrefaciens CN-32 hypothetical protein YP_001183199.1 1910194 R 319224 CDS YP_001183200.1 146292776 5079334 complement(1911770..1912108) 1 NC_009438.1 KEGG: shm:Shewmr7_2360 hypothetical protein; hypothetical protein 1912108 5079334 Sputcn32_1676 Shewanella putrefaciens CN-32 hypothetical protein YP_001183200.1 1911770 R 319224 CDS YP_001183201.1 146292777 5079335 complement(1912194..1912655) 1 NC_009438.1 PFAM: protein of unknown function DUF55; KEGG: son:SO1969 hypothetical protein; hypothetical protein 1912655 5079335 Sputcn32_1677 Shewanella putrefaciens CN-32 hypothetical protein YP_001183201.1 1912194 R 319224 CDS YP_001183202.1 146292778 5079336 1912942..1913322 1 NC_009438.1 KEGG: son:SO1970 hypothetical protein; hypothetical protein 1913322 5079336 Sputcn32_1678 Shewanella putrefaciens CN-32 hypothetical protein YP_001183202.1 1912942 D 319224 CDS YP_001183203.1 146292779 5079337 1913462..1915174 1 NC_009438.1 activates fatty acids by binding to coenzyme A; AMP-binding protein 1915174 5079337 Sputcn32_1679 Shewanella putrefaciens CN-32 AMP-binding protein YP_001183203.1 1913462 D 319224 CDS YP_001183204.1 146292780 5079338 complement(1915276..1917915) 1 NC_009438.1 KEGG: she:Shewmr4_1565 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 1917915 5079338 Sputcn32_1680 Shewanella putrefaciens CN-32 putative PAS/PAC sensor protein YP_001183204.1 1915276 R 319224 CDS YP_001183205.1 146292781 5079339 complement(1918052..1918618) 1 NC_009438.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 1918618 5079339 Sputcn32_1681 Shewanella putrefaciens CN-32 disulfide bond formation protein B YP_001183205.1 1918052 R 319224 CDS YP_001183206.1 146292782 5079340 complement(1918678..1920264) 1 NC_009438.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 1920264 nhaB 5079340 nhaB Shewanella putrefaciens CN-32 sodium/proton antiporter YP_001183206.1 1918678 R 319224 CDS YP_001183207.1 146292783 5079341 1920578..1921294 1 NC_009438.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 1921294 5079341 Sputcn32_1683 Shewanella putrefaciens CN-32 fatty acid metabolism regulator YP_001183207.1 1920578 D 319224 CDS YP_001183208.1 146292784 5079342 complement(1921381..1922898) 1 NC_009438.1 PFAM: SpoVR family protein; KEGG: son:SO2884 hypothetical protein; SpoVR family protein 1922898 5079342 Sputcn32_1684 Shewanella putrefaciens CN-32 SpoVR family protein YP_001183208.1 1921381 R 319224 CDS YP_001183209.1 146292785 5079343 complement(1922908..1924182) 1 NC_009438.1 PFAM: protein of unknown function DUF444; KEGG: shm:Shewmr7_1645 protein of unknown function DUF444; hypothetical protein 1924182 5079343 Sputcn32_1685 Shewanella putrefaciens CN-32 hypothetical protein YP_001183209.1 1922908 R 319224 CDS YP_001183210.1 146292786 5079344 complement(1924243..1926177) 1 NC_009438.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: shm:Shewmr7_1646 putative serine protein kinase, PrkA; putative serine protein kinase PrkA 1926177 5079344 Sputcn32_1686 Shewanella putrefaciens CN-32 putative serine protein kinase PrkA YP_001183210.1 1924243 R 319224 CDS YP_001183211.1 146292787 5079345 complement(1926439..1927023) 1 NC_009438.1 PFAM: manganese and iron superoxide dismutase; KEGG: shm:Shewmr7_1647 superoxide dismutase; superoxide dismutase 1927023 5079345 Sputcn32_1687 Shewanella putrefaciens CN-32 superoxide dismutase YP_001183211.1 1926439 R 319224 CDS YP_001183212.1 146292788 5079346 1927249..1927581 1 NC_009438.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: shm:Shewmr7_1648 glutaredoxin-like protein; glutaredoxin-like protein 1927581 5079346 Sputcn32_1688 Shewanella putrefaciens CN-32 glutaredoxin-like protein YP_001183212.1 1927249 D 319224 CDS YP_001183213.1 146292789 5079347 complement(1927710..1928948) 1 NC_009438.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: son:SO2879 uracil permease; uracil-xanthine permease 1928948 5079347 Sputcn32_1689 Shewanella putrefaciens CN-32 uracil-xanthine permease YP_001183213.1 1927710 R 319224 CDS YP_001183214.1 146292790 5079348 1929154..1930245 1 NC_009438.1 KEGG: she:Shewmr4_1575 hypothetical protein; hypothetical protein 1930245 5079348 Sputcn32_1690 Shewanella putrefaciens CN-32 hypothetical protein YP_001183214.1 1929154 D 319224 CDS YP_001183215.1 146292791 5079349 1930335..1931045 1 NC_009438.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 1931045 5079349 Sputcn32_1691 Shewanella putrefaciens CN-32 DNA replication initiation factor YP_001183215.1 1930335 D 319224 CDS YP_001183216.1 146292792 5079350 complement(1931127..1933076) 1 NC_009438.1 KEGG: son:SO2876 hypothetical protein; hypothetical protein 1933076 5079350 Sputcn32_1692 Shewanella putrefaciens CN-32 hypothetical protein YP_001183216.1 1931127 R 319224 CDS YP_001183217.1 146292793 5079351 complement(1933303..1933725) 1 NC_009438.1 KEGG: shm:Shewmr7_2421 hypothetical protein; hypothetical protein 1933725 5079351 Sputcn32_1693 Shewanella putrefaciens CN-32 hypothetical protein YP_001183217.1 1933303 R 319224 CDS YP_001183218.1 146292794 5079352 complement(1933729..1934079) 1 NC_009438.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: son:SO2871 arsenate reductase, putative; arsenate reductase 1934079 5079352 Sputcn32_1694 Shewanella putrefaciens CN-32 arsenate reductase YP_001183218.1 1933729 R 319224 CDS YP_001183219.1 146292795 5079353 complement(1934197..1935654) 1 NC_009438.1 PFAM: peptidase M48, Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: shm:Shewmr7_2419 peptidase M48, Ste24p; peptidase M48, Ste24p 1935654 5079353 Sputcn32_1695 Shewanella putrefaciens CN-32 peptidase M48, Ste24p YP_001183219.1 1934197 R 319224 CDS YP_001183220.1 146292796 5079354 1935782..1936015 1 NC_009438.1 PFAM: SirA family protein; KEGG: shm:Shewmr7_2418 SirA family protein; SirA family protein 1936015 5079354 Sputcn32_1696 Shewanella putrefaciens CN-32 SirA family protein YP_001183220.1 1935782 D 319224 CDS YP_001183221.1 146292797 5079355 1936193..1937275 1 NC_009438.1 PFAM: protein of unknown function UPF0118; KEGG: shm:Shewmr7_2417 protein of unknown function UPF0118; hypothetical protein 1937275 5079355 Sputcn32_1697 Shewanella putrefaciens CN-32 hypothetical protein YP_001183221.1 1936193 D 319224 CDS YP_001183222.1 146292798 5079356 complement(1937354..1938283) 1 NC_009438.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 1938283 5079356 Sputcn32_1698 Shewanella putrefaciens CN-32 chromosome replication initiation inhibitor protein YP_001183222.1 1937354 R 319224 CDS YP_001183223.1 146292799 5079357 1938395..1939036 1 NC_009438.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: son:SO2865 L-lysine exporter, putative; lysine exporter protein LysE/YggA 1939036 5079357 Sputcn32_1699 Shewanella putrefaciens CN-32 lysine exporter protein LysE/YggA YP_001183223.1 1938395 D 319224 CDS YP_001183224.1 146292800 5079358 complement(1939234..1939701) 1 NC_009438.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 1939701 bcp 5079358 bcp Shewanella putrefaciens CN-32 thioredoxin-dependent thiol peroxidase YP_001183224.1 1939234 R 319224 CDS YP_001183225.1 146292801 5079359 complement(1939705..1940256) 1 NC_009438.1 KEGG: son:SO1878 glycine cleavage system transcriptional repressor, putative; glycine cleavage system transcriptional repressor 1940256 5079359 Sputcn32_1701 Shewanella putrefaciens CN-32 glycine cleavage system transcriptional repressor YP_001183225.1 1939705 R 319224 CDS YP_001183226.1 146292802 5079360 1940429..1941313 1 NC_009438.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1941313 5079360 Sputcn32_1702 Shewanella putrefaciens CN-32 dihydrodipicolinate synthase YP_001183226.1 1940429 D 319224 CDS YP_001183227.1 146292803 5079361 1941317..1942414 1 NC_009438.1 PFAM: NlpBDapX family lipoprotein; KEGG: son:SO1880 lipoprotein-34 NlpB; NlpB/DapX family lipoprotein 1942414 5079361 Sputcn32_1703 Shewanella putrefaciens CN-32 NlpB/DapX family lipoprotein YP_001183227.1 1941317 D 319224 CDS YP_001183228.1 146292804 5079362 1942770..1943855 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_2410 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 1943855 5079362 Sputcn32_1704 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001183228.1 1942770 D 319224 CDS YP_001183229.1 146292805 5079363 1943852..1946947 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_2409 acriflavin resistance protein; acriflavin resistance protein 1946947 5079363 Sputcn32_1705 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001183229.1 1943852 D 319224 CDS YP_001183230.1 146292806 5079364 complement(1947081..1947521) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_2335 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1947521 5079364 Sputcn32_1706 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183230.1 1947081 R 319224 CDS YP_001183231.1 146292807 5079365 complement(1947629..1948795) 1 NC_009438.1 PFAM: glucose sorbosone dehydrogenase; KEGG: ilo:IL2579 glucose dehydrogenase, putative; glucose sorbosone dehydrogenase 1948795 5079365 Sputcn32_1707 Shewanella putrefaciens CN-32 glucose sorbosone dehydrogenase YP_001183231.1 1947629 R 319224 CDS YP_001183232.1 146292808 5079366 complement(1948912..1949670) 1 NC_009438.1 PFAM: protein of unknown function DUF81; KEGG: she:Shewmr4_2333 protein of unknown function DUF81; hypothetical protein 1949670 5079366 Sputcn32_1708 Shewanella putrefaciens CN-32 hypothetical protein YP_001183232.1 1948912 R 319224 CDS YP_001183233.1 146292809 5079367 complement(1949862..1950179) 1 NC_009438.1 KEGG: shm:Shewmr7_2405 hypothetical protein; hypothetical protein 1950179 5079367 Sputcn32_1709 Shewanella putrefaciens CN-32 hypothetical protein YP_001183233.1 1949862 R 319224 CDS YP_001183234.1 146292810 5079368 complement(1950218..1950820) 1 NC_009438.1 PFAM: ThiJ/PfpI domain protein; KEGG: son:SO1887 hypothetical protein; ThiJ/PfpI domain-containing protein 1950820 5079368 Sputcn32_1710 Shewanella putrefaciens CN-32 ThiJ/PfpI domain-containing protein YP_001183234.1 1950218 R 319224 CDS YP_001183235.1 146292811 5079369 complement(1950957..1951979) 1 NC_009438.1 hypothetical protein 1951979 5079369 Sputcn32_1711 Shewanella putrefaciens CN-32 hypothetical protein YP_001183235.1 1950957 R 319224 CDS YP_001183236.1 146292812 5079370 1952170..1952487 1 NC_009438.1 hypothetical protein 1952487 5079370 Sputcn32_1712 Shewanella putrefaciens CN-32 hypothetical protein YP_001183236.1 1952170 D 319224 CDS YP_001183237.1 146292813 5079371 complement(1952587..1953243) 1 NC_009438.1 KEGG: shm:Shewmr7_2400 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B 1953243 5079371 Sputcn32_1713 Shewanella putrefaciens CN-32 3-oxoacid CoA-transferase subunit B YP_001183237.1 1952587 R 319224 CDS YP_001183238.1 146292814 5079272 complement(1953372..1954076) 1 NC_009438.1 KEGG: son:SO1892 acetate CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A 1954076 5079272 Sputcn32_1714 Shewanella putrefaciens CN-32 3-oxoacid CoA-transferase subunit A YP_001183238.1 1953372 R 319224 CDS YP_001183239.1 146292815 5079273 complement(1954123..1955070) 1 NC_009438.1 PFAM: pyruvate carboxyltransferase; KEGG: shm:Shewmr7_2398 pyruvate carboxyltransferase; pyruvate carboxyltransferase 1955070 5079273 Sputcn32_1715 Shewanella putrefaciens CN-32 pyruvate carboxyltransferase YP_001183239.1 1954123 R 319224 CDS YP_001183240.1 146292816 5079274 complement(1955071..1957140) 1 NC_009438.1 PFAM: biotin/lipoyl attachment domain-containing protein; phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO1894 3-methylcrotonyl-CoA carboxylase alpha subunit; carbamoyl-phosphate synthase subunit L 1957140 5079274 Sputcn32_1716 Shewanella putrefaciens CN-32 carbamoyl-phosphate synthase subunit L YP_001183240.1 1955071 R 319224 CDS YP_001183241.1 146292817 5079275 complement(1957140..1958006) 1 NC_009438.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: son:SO1895 enoyl-CoA hydratase; enoyl-CoA hydratase/isomerase 1958006 5079275 Sputcn32_1717 Shewanella putrefaciens CN-32 enoyl-CoA hydratase/isomerase YP_001183241.1 1957140 R 319224 CDS YP_001183242.1 146292818 5079276 complement(1958068..1959675) 1 NC_009438.1 PFAM: carboxyl transferase; KEGG: she:Shewmr4_2323 propionyl-CoA carboxylase; propionyl-CoA carboxylase 1959675 5079276 Sputcn32_1718 Shewanella putrefaciens CN-32 propionyl-CoA carboxylase YP_001183242.1 1958068 R 319224 CDS YP_001183243.1 146292819 5079277 complement(1959779..1960948) 1 NC_009438.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: son:SO1897 isovaleryl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 1960948 5079277 Sputcn32_1719 Shewanella putrefaciens CN-32 acyl-CoA dehydrogenase domain-containing protein YP_001183243.1 1959779 R 319224 CDS YP_001183244.1 146292820 5079278 complement(1961101..1961505) 1 NC_009438.1 PFAM: regulatory protein, MerR; KEGG: shm:Shewmr7_2393 transcriptional regulator, MerR family; MerR family transcriptional regulator 1961505 5079278 Sputcn32_1720 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001183244.1 1961101 R 319224 CDS YP_001183245.1 146292821 5079279 1961785..1963743 1 NC_009438.1 PFAM: AMP-dependent synthetase and ligase; KEGG: she:Shewmr4_2319 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1963743 5079279 Sputcn32_1721 Shewanella putrefaciens CN-32 AMP-dependent synthetase and ligase YP_001183245.1 1961785 D 319224 CDS YP_001183246.1 146292822 5079280 1964041..1964355 1 NC_009438.1 PFAM: small multidrug resistance protein; KEGG: son:SO1901 sugE protein; small multidrug resistance protein 1964355 5079280 Sputcn32_1722 Shewanella putrefaciens CN-32 small multidrug resistance protein YP_001183246.1 1964041 D 319224 CDS YP_001183247.1 146292823 5079281 1964506..1966032 1 NC_009438.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1966032 5079281 Sputcn32_1723 Shewanella putrefaciens CN-32 6-phosphogluconate dehydrogenase YP_001183247.1 1964506 D 319224 CDS YP_001183248.1 146292824 5079282 complement(1966186..1967076) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_1689 transcriptional regulator, LysR family; LysR family transcriptional regulator 1967076 5079282 Sputcn32_1724 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183248.1 1966186 R 319224 CDS YP_001183249.1 146292825 5079283 1967422..1968234 1 NC_009438.1 PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: shm:Shewmr7_1691 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; extradiol ring-cleavage dioxygenase III subunit B 1968234 5079283 Sputcn32_1725 Shewanella putrefaciens CN-32 extradiol ring-cleavage dioxygenase III subunit B YP_001183249.1 1967422 D 319224 CDS YP_001183250.1 146292826 5079284 complement(1968380..1969255) 1 NC_009438.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: son:SO1910 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1969255 5079284 Sputcn32_1726 Shewanella putrefaciens CN-32 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001183250.1 1968380 R 319224 CDS YP_001183251.1 146292827 5079285 1969652..1970593 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: she:Shewmr4_1618 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1970593 5079285 Sputcn32_1727 Shewanella putrefaciens CN-32 short-chain dehydrogenase/reductase SDR YP_001183251.1 1969652 D 319224 CDS YP_001183252.1 146292828 5079286 1970711..1971577 1 NC_009438.1 KEGG: she:Shewmr4_1619 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 1971577 5079286 Sputcn32_1728 Shewanella putrefaciens CN-32 acyl-CoA thioesterase II YP_001183252.1 1970711 D 319224 CDS YP_001183253.1 146292829 5079287 1971579..1971983 1 NC_009438.1 KEGG: son:SO1913 hypothetical protein; hypothetical protein 1971983 5079287 Sputcn32_1729 Shewanella putrefaciens CN-32 hypothetical protein YP_001183253.1 1971579 D 319224 CDS YP_001183254.1 146292830 5079288 complement(1972030..1972911) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: she:Shewmr4_1621 transcriptional regulator, LysR family; LysR family transcriptional regulator 1972911 5079288 Sputcn32_1730 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183254.1 1972030 R 319224 CDS YP_001183255.1 146292831 5079289 1973030..1974298 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: shm:Shewmr7_1697 major facilitator superfamily MFS_1; major facilitator superfamily transporter 1974298 5079289 Sputcn32_1731 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001183255.1 1973030 D 319224 CDS YP_001183256.1 146292832 5079290 complement(1974433..1975986) 1 NC_009438.1 PFAM: Ppx/GppA phosphatase; KEGG: she:Shewmr4_2208 Ppx/GppA phosphatase; Ppx/GppA phosphatase 1975986 5079290 Sputcn32_1732 Shewanella putrefaciens CN-32 Ppx/GppA phosphatase YP_001183256.1 1974433 R 319224 CDS YP_001183257.1 146292833 5079291 complement(1976030..1978192) 1 NC_009438.1 PFAM: Polyphosphate kinase; KEGG: she:Shewmr4_2207 polyphosphate kinase; polyphosphate kinase 1978192 5079291 Sputcn32_1733 Shewanella putrefaciens CN-32 polyphosphate kinase YP_001183257.1 1976030 R 319224 CDS YP_001183258.1 146292834 5079292 1978640..1980106 1 NC_009438.1 KEGG: she:Shewmr4_2206 hypothetical protein; putative chaperone 1980106 5079292 Sputcn32_1734 Shewanella putrefaciens CN-32 putative chaperone YP_001183258.1 1978640 D 319224 CDS YP_001183259.1 146292835 5079293 1980138..1980626 1 NC_009438.1 PFAM: CreA family protein; KEGG: she:Shewmr4_2205 CreA family protein; CreA family protein 1980626 5079293 Sputcn32_1735 Shewanella putrefaciens CN-32 CreA family protein YP_001183259.1 1980138 D 319224 CDS YP_001183260.1 146292836 5079294 complement(1980741..1981940) 1 NC_009438.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 1981940 5079294 Sputcn32_1736 Shewanella putrefaciens CN-32 cystathionine beta-lyase YP_001183260.1 1980741 R 319224 CDS YP_001183261.1 146292837 5079295 complement(1982162..1984321) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: shm:Shewmr7_2280 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1984321 5079295 Sputcn32_1737 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001183261.1 1982162 R 319224 CDS YP_001183262.1 146292838 5079296 complement(1984354..1985046) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2193 DNA-binding response regulator; two component transcriptional regulator 1985046 5079296 Sputcn32_1738 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001183262.1 1984354 R 319224 CDS YP_001183263.1 146292839 5079297 1985322..1987595 1 NC_009438.1 KEGG: shm:Shewmr7_2277 vault protein inter-alpha-trypsin domain protein; TIGRFAM: LPXTG-motif cell wall anchor domain; PFAM: von Willebrand factor, type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; cell wall anchor domain-containing protein 1987595 5079297 Sputcn32_1739 Shewanella putrefaciens CN-32 cell wall anchor domain-containing protein YP_001183263.1 1985322 D 319224 CDS YP_001183264.1 146292840 5079298 1987608..1988222 1 NC_009438.1 TIGRFAM: sortase family protein; PFAM: peptidase C60, sortase A and B; KEGG: she:Shewmr4_2199 sortase family protein; sortase family protein 1988222 5079298 Sputcn32_1740 Shewanella putrefaciens CN-32 sortase family protein YP_001183264.1 1987608 D 319224 CDS YP_001183265.1 146292841 5079299 complement(1988290..1989315) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: she:Shewmr4_2198 diguanylate cyclase; diguanylate cyclase 1989315 5079299 Sputcn32_1741 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001183265.1 1988290 R 319224 CDS YP_001183266.1 146292842 5079300 1989504..1991102 1 NC_009438.1 PFAM: peptidase M28; KEGG: she:Shewmr4_2197 peptidase M28; peptidase M28 1991102 5079300 Sputcn32_1742 Shewanella putrefaciens CN-32 peptidase M28 YP_001183266.1 1989504 D 319224 CDS YP_001183267.1 146292843 5079301 complement(1991160..1992023) 1 NC_009438.1 KEGG: shm:Shewmr7_2273 hypothetical protein; hypothetical protein 1992023 5079301 Sputcn32_1743 Shewanella putrefaciens CN-32 hypothetical protein YP_001183267.1 1991160 R 319224 CDS YP_001183268.1 146292844 5079302 complement(1992349..1993344) 1 NC_009438.1 TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO2200 ribosomal protein S6 modification protein, putative; alpha-L-glutamate ligase 1993344 5079302 Sputcn32_1744 Shewanella putrefaciens CN-32 alpha-L-glutamate ligase YP_001183268.1 1992349 R 319224 CDS YP_001183269.1 146292845 5079303 complement(1993365..1993811) 1 NC_009438.1 PFAM: protein of unknown function DUF413; KEGG: she:Shewmr4_2194 protein of unknown function DUF413; hypothetical protein 1993811 5079303 Sputcn32_1745 Shewanella putrefaciens CN-32 hypothetical protein YP_001183269.1 1993365 R 319224 CDS YP_001183270.1 146292846 5079304 1993920..1994768 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2202 transcriptional regulator, LysR family; LysR family transcriptional regulator 1994768 5079304 Sputcn32_1746 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183270.1 1993920 D 319224 CDS YP_001183271.1 146292847 5079305 complement(1994848..1995219) 1 NC_009438.1 PFAM: diacylglycerol kinase; KEGG: shm:Shewmr7_2269 diacylglycerol kinase; diacylglycerol kinase 1995219 5079305 Sputcn32_1747 Shewanella putrefaciens CN-32 diacylglycerol kinase YP_001183271.1 1994848 R 319224 CDS YP_001183272.1 146292848 5079306 1995539..1996468 1 NC_009438.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 1996468 5079306 Sputcn32_1748 Shewanella putrefaciens CN-32 DNA ligase YP_001183272.1 1995539 D 319224 CDS YP_001183273.1 146292849 5079307 1996522..1997004 1 NC_009438.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: she:Shewmr4_2189 protein tyrosine phosphatase; protein tyrosine phosphatase 1997004 5079307 Sputcn32_1749 Shewanella putrefaciens CN-32 protein tyrosine phosphatase YP_001183273.1 1996522 D 319224 CDS YP_001183274.1 146292850 5079308 1997068..1997370 1 NC_009438.1 KEGG: shm:Shewmr7_3172 hypothetical protein; hypothetical protein 1997370 5079308 Sputcn32_1750 Shewanella putrefaciens CN-32 hypothetical protein YP_001183274.1 1997068 D 319224 CDS YP_001183275.1 146292851 5079309 1997668..1998135 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ppr:PBPRB1061 hypothetical protein; N-acetyltransferase GCN5 1998135 5079309 Sputcn32_1751 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183275.1 1997668 D 319224 CDS YP_001183276.1 146292852 5079310 complement(1998526..1999467) 1 NC_009438.1 essential GTPase; functions in ribosome assembly; binds a unique part of the 23S rRNA; interacts with ribosomal protein L25(Ctc); ribosomal biogenesis GTPase 1999467 rbgA 5079310 rbgA Shewanella putrefaciens CN-32 ribosomal biogenesis GTPase YP_001183276.1 1998526 R 319224 CDS YP_001183277.1 146292853 5079311 complement(1999618..2000457) 1 NC_009438.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: shm:Shewmr7_2262 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2000457 5079311 Sputcn32_1753 Shewanella putrefaciens CN-32 2OG-Fe(II) oxygenase YP_001183277.1 1999618 R 319224 CDS YP_001183278.1 146292854 5079312 2000838..2001743 1 NC_009438.1 this fusion consists of methionine sulfoxide B reductase at the N-terminus and A at the C-terminus; A and B are stereospecific enzymes that recognize the damaged produces of oxidative stress, S and R epimers of methionine sulfoxide, respectively; a fusion protein of these enzymes with thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; bifunctional methionine sulfoxide reductase B/A protein 2001743 5079312 Sputcn32_1754 Shewanella putrefaciens CN-32 bifunctional methionine sulfoxide reductase B/A protein YP_001183278.1 2000838 D 319224 CDS YP_001183279.1 146292855 5079313 complement(2001839..2002822) 1 NC_009438.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2002822 5079313 Sputcn32_1755 Shewanella putrefaciens CN-32 delta-aminolevulinic acid dehydratase YP_001183279.1 2001839 R 319224 CDS YP_001183280.1 146292856 5079314 2003214..2003924 1 NC_009438.1 PFAM: peptidase M22, glycoprotease; KEGG: son:SO2586 hypothetical protein; peptidase M22, glycoprotease 2003924 5079314 Sputcn32_1756 Shewanella putrefaciens CN-32 peptidase M22, glycoprotease YP_001183280.1 2003214 D 319224 CDS YP_001183281.1 146292857 5079315 2004049..2004354 1 NC_009438.1 KEGG: shm:Shewmr7_2258 hypothetical protein; hypothetical protein 2004354 5079315 Sputcn32_1757 Shewanella putrefaciens CN-32 hypothetical protein YP_001183281.1 2004049 D 319224 CDS YP_001183282.1 146292858 5079316 2004347..2005063 1 NC_009438.1 KEGG: she:Shewmr4_2180 hypothetical protein; hypothetical protein 2005063 5079316 Sputcn32_1758 Shewanella putrefaciens CN-32 hypothetical protein YP_001183282.1 2004347 D 319224 CDS YP_001183283.1 146292859 5079317 2005266..2006078 1 NC_009438.1 KEGG: shm:Shewmr7_2256 hypothetical protein; hypothetical protein 2006078 5079317 Sputcn32_1759 Shewanella putrefaciens CN-32 hypothetical protein YP_001183283.1 2005266 D 319224 CDS YP_001183284.1 146292860 5079318 2006100..2006966 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: shm:Shewmr7_2255 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 2006966 5079318 Sputcn32_1760 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001183284.1 2006100 D 319224 CDS YP_001183285.1 146292861 5079319 2007165..2008838 1 NC_009438.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2008838 5079319 Sputcn32_1761 Shewanella putrefaciens CN-32 long-chain-fatty-acid--CoA ligase YP_001183285.1 2007165 D 319224 CDS YP_001183286.1 146292862 5079320 2008916..2010019 1 NC_009438.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: she:Shewmr4_2176 ribonuclease D; ribonuclease D 2010019 5079320 Sputcn32_1762 Shewanella putrefaciens CN-32 ribonuclease D YP_001183286.1 2008916 D 319224 CDS YP_001183287.1 146292863 5079321 complement(2010092..2010349) 1 NC_009438.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2010349 minE 5079321 minE Shewanella putrefaciens CN-32 cell division topological specificity factor MinE YP_001183287.1 2010092 R 319224 CDS YP_001183288.1 146292864 5079223 complement(2010352..2011161) 1 NC_009438.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: shm:Shewmr7_2251 septum site-determining protein MinD; septum site-determining protein MinD 2011161 5079223 Sputcn32_1764 Shewanella putrefaciens CN-32 septum site-determining protein MinD YP_001183288.1 2010352 R 319224 CDS YP_001183289.1 146292865 5079224 complement(2011189..2011854) 1 NC_009438.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 2011854 minC 5079224 minC Shewanella putrefaciens CN-32 septum formation inhibitor YP_001183289.1 2011189 R 319224 CDS YP_001183290.1 146292866 5079225 2011978..2012256 1 NC_009438.1 PFAM: protein of unknown function DUF709; KEGG: son:SO2575 hypothetical protein; hypothetical protein 2012256 5079225 Sputcn32_1766 Shewanella putrefaciens CN-32 hypothetical protein YP_001183290.1 2011978 D 319224 CDS YP_001183291.1 146292867 5079226 2012411..2012884 1 NC_009438.1 PFAM: protein of unknown function UPF0153; KEGG: she:Shewmr4_2170 protein of unknown function UPF0153; hypothetical protein 2012884 5079226 Sputcn32_1767 Shewanella putrefaciens CN-32 hypothetical protein YP_001183291.1 2012411 D 319224 CDS YP_001183292.1 146292868 5079227 complement(2012952..2013446) 1 NC_009438.1 PFAM: peptidyl-prolyl cis-trans isomerase, cyclophilin type; KEGG: she:Shewmr4_2169 peptidyl-prolyl cis-trans isomerase, cyclophilin type; cyclophilin type peptidyl-prolyl cis-trans isomerase 2013446 5079227 Sputcn32_1768 Shewanella putrefaciens CN-32 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_001183292.1 2012952 R 319224 CDS YP_001183293.1 146292869 5079228 complement(2013471..2014874) 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: son:SO2571 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase 2014874 5079228 Sputcn32_1769 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001183293.1 2013471 R 319224 CDS YP_001183294.1 146292870 5079229 2015254..2017026 1 NC_009438.1 PFAM: protein of unknown function DUF885; KEGG: son:SO2570 lipoprotein, putative; hypothetical protein 2017026 5079229 Sputcn32_1770 Shewanella putrefaciens CN-32 hypothetical protein YP_001183294.1 2015254 D 319224 CDS YP_001183295.1 146292871 5079230 complement(2017285..2017605) 1 NC_009438.1 KEGG: son:SO2569 hypothetical protein; hypothetical protein 2017605 5079230 Sputcn32_1771 Shewanella putrefaciens CN-32 hypothetical protein YP_001183295.1 2017285 R 319224 CDS YP_001183296.1 146292872 5079231 2017839..2018333 1 NC_009438.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 2018333 5079231 Sputcn32_1772 Shewanella putrefaciens CN-32 ribonuclease activity regulator protein RraA YP_001183296.1 2017839 D 319224 CDS YP_001183297.1 146292873 5079232 2018376..2020202 1 NC_009438.1 PFAM: AsmA family protein; KEGG: shm:Shewmr7_2241 AsmA family protein; AsmA family protein 2020202 5079232 Sputcn32_1773 Shewanella putrefaciens CN-32 AsmA family protein YP_001183297.1 2018376 D 319224 CDS YP_001183298.1 146292874 5079233 2020202..2020807 1 NC_009438.1 KEGG: shm:Shewmr7_2240 intracellular proteinase inhibitor domain protein; intracellular proteinase inhibitor domain-containing protein 2020807 5079233 Sputcn32_1774 Shewanella putrefaciens CN-32 intracellular proteinase inhibitor domain-containing protein YP_001183298.1 2020202 D 319224 CDS YP_001183299.1 146292875 5079234 complement(2020914..2022458) 1 NC_009438.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: shm:Shewmr7_2239 MLTD_N domain protein; MltD domain-containing protein 2022458 5079234 Sputcn32_1775 Shewanella putrefaciens CN-32 MltD domain-containing protein YP_001183299.1 2020914 R 319224 CDS YP_001183300.1 146292876 5079235 complement(2022701..2023504) 1 NC_009438.1 PFAM: beta-lactamase domain protein; KEGG: shm:Shewmr7_2238 hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 2023504 5079235 Sputcn32_1776 Shewanella putrefaciens CN-32 hydroxyacylglutathione hydrolase YP_001183300.1 2022701 R 319224 CDS YP_001183301.1 146292877 5079236 2023670..2024404 1 NC_009438.1 PFAM: Methyltransferase type 11; KEGG: she:Shewmr4_2160 methyltransferase type 11; type 11 methyltransferase 2024404 5079236 Sputcn32_1777 Shewanella putrefaciens CN-32 type 11 methyltransferase YP_001183301.1 2023670 D 319224 CDS YP_001183302.1 146292878 5079237 2024428..2025324 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_2236 transcriptional regulator, LysR family; LysR family transcriptional regulator 2025324 5079237 Sputcn32_1778 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183302.1 2024428 D 319224 CDS YP_001183303.1 146292879 5079238 complement(2025488..2025958) 1 NC_009438.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2025958 rnhA 5079238 rnhA Shewanella putrefaciens CN-32 ribonuclease H YP_001183303.1 2025488 R 319224 CDS YP_001183304.1 146292880 5079239 2026029..2026757 1 NC_009438.1 KEGG: son:SO2559 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2026757 5079239 Sputcn32_1780 Shewanella putrefaciens CN-32 DNA polymerase III subunit epsilon YP_001183304.1 2026029 D 319224 CDS YP_001183305.1 146292881 5079240 2026768..2028135 1 NC_009438.1 KEGG: shm:Shewmr7_2233 hypothetical protein; hypothetical protein 2028135 5079240 Sputcn32_1781 Shewanella putrefaciens CN-32 hypothetical protein YP_001183305.1 2026768 D 319224 CDS YP_001183306.1 146292882 5079243 complement(2028708..2029574) 1 NC_009438.1 PFAM: OmpA/MotB domain protein; KEGG: noc:Noc_2042 OmpA/MotB; OmpA/MotB domain-containing protein 2029574 5079243 Sputcn32_1782 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001183306.1 2028708 R 319224 CDS YP_001183307.1 146292883 5079244 complement(2029571..2029996) 1 NC_009438.1 KEGG: son:SO2554 hypothetical protein; hypothetical protein 2029996 5079244 Sputcn32_1783 Shewanella putrefaciens CN-32 hypothetical protein YP_001183307.1 2029571 R 319224 CDS YP_001183308.1 146292884 5079245 complement(2030112..2030939) 1 NC_009438.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: son:SO2553 hyperosmotically inducible periplasmic protein; transport-associated 2030939 5079245 Sputcn32_1784 Shewanella putrefaciens CN-32 transport-associated YP_001183308.1 2030112 R 319224 CDS YP_001183309.1 146292885 5079246 complement(2031031..2031399) 1 NC_009438.1 KEGG: son:SO2552 hypothetical protein; hypothetical protein 2031399 5079246 Sputcn32_1785 Shewanella putrefaciens CN-32 hypothetical protein YP_001183309.1 2031031 R 319224 CDS YP_001183310.1 146292886 5079247 complement(2031780..2032547) 1 NC_009438.1 PFAM: cyclic nucleotide-binding; KEGG: son:SO2551 transcriptional regulator-related protein; cyclic nucleotide-binding protein 2032547 5079247 Sputcn32_1786 Shewanella putrefaciens CN-32 cyclic nucleotide-binding protein YP_001183310.1 2031780 R 319224 CDS YP_001183311.1 146292887 5079248 complement(2032671..2033369) 1 NC_009438.1 KEGG: son:SO2550 transcriptional regulator-related protein; CRP/FNR family transcriptional regulator 2033369 5079248 Sputcn32_1787 Shewanella putrefaciens CN-32 CRP/FNR family transcriptional regulator YP_001183311.1 2032671 R 319224 CDS YP_001183312.1 146292888 5079249 complement(2033506..2033817) 1 NC_009438.1 PFAM: transport-associated; KEGG: son:SO2549 hypothetical protein; transport-associated 2033817 5079249 Sputcn32_1788 Shewanella putrefaciens CN-32 transport-associated YP_001183312.1 2033506 R 319224 CDS YP_001183313.1 146292889 5079250 complement(2033860..2034069) 1 NC_009438.1 KEGG: rfr:Rfer_1879 hypothetical protein; hypothetical protein 2034069 5079250 Sputcn32_1789 Shewanella putrefaciens CN-32 hypothetical protein YP_001183313.1 2033860 R 319224 CDS YP_001183314.1 146292890 5079251 2034311..2034730 1 NC_009438.1 PFAM: PRC-barrel domain protein; KEGG: net:Neut_2352 PRC-barrel domain protein; PRC-barrel domain-containing protein 2034730 5079251 Sputcn32_1790 Shewanella putrefaciens CN-32 PRC-barrel domain-containing protein YP_001183314.1 2034311 D 319224 CDS YP_001183315.1 146292891 5079252 complement(2034992..2037439) 1 NC_009438.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2037439 fadE 5079252 fadE Shewanella putrefaciens CN-32 acyl-CoA dehydrogenase YP_001183315.1 2034992 R 319224 CDS YP_001183316.1 146292892 5079253 2037683..2038462 1 NC_009438.1 PFAM: glutamine amidotransferase, class-II; KEGG: shm:Shewmr7_2222 glutamine amidotransferase, class-II; glutamine amidotransferase, class-II 2038462 5079253 Sputcn32_1792 Shewanella putrefaciens CN-32 glutamine amidotransferase, class-II YP_001183316.1 2037683 D 319224 CDS YP_001183317.1 146292893 5079254 complement(2038627..2039517) 1 NC_009438.1 KEGG: son:SO2533 hypothetical protein; hypothetical protein 2039517 5079254 Sputcn32_1793 Shewanella putrefaciens CN-32 hypothetical protein YP_001183317.1 2038627 R 319224 CDS YP_001183318.1 146292894 5079255 complement(2039625..2040050) 1 NC_009438.1 PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; KEGG: shm:Shewmr7_2220 methylated-DNA-(protein)-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2040050 5079255 Sputcn32_1794 Shewanella putrefaciens CN-32 methylated-DNA--protein-cysteine methyltransferase YP_001183318.1 2039625 R 319224 CDS YP_001183319.1 146292895 5079256 2040319..2040810 1 NC_009438.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 2040810 def 5079256 def Shewanella putrefaciens CN-32 peptide deformylase YP_001183319.1 2040319 D 319224 CDS YP_001183320.1 146292896 5079257 2041041..2041886 1 NC_009438.1 KEGG: shm:Shewmr7_2218 hypothetical protein; hypothetical protein 2041886 5079257 Sputcn32_1796 Shewanella putrefaciens CN-32 hypothetical protein YP_001183320.1 2041041 D 319224 CDS YP_001183321.1 146292897 5079258 2042029..2042469 1 NC_009438.1 KEGG: cgb:cg2479 hypothetical protein; hypothetical protein 2042469 5079258 Sputcn32_1797 Shewanella putrefaciens CN-32 hypothetical protein YP_001183321.1 2042029 D 319224 CDS YP_001183322.1 146292898 5079260 2042812..2044026 1 NC_009438.1 PFAM: Fmu (Sun) domain protein; KEGG: she:Shewmr4_2131 Fmu (Sun) domain protein; Fmu (Sun) domain-containing protein 2044026 5079260 Sputcn32_1799 Shewanella putrefaciens CN-32 Fmu (Sun) domain-containing protein YP_001183322.1 2042812 D 319224 CDS YP_001183323.1 146292899 5079261 2044164..2046413 1 NC_009438.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold domain protein; KEGG: she:Shewmr4_2130 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2046413 5079261 Sputcn32_1800 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001183323.1 2044164 D 319224 CDS YP_001183324.1 146292900 5079262 complement(2046504..2047517) 1 NC_009438.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 2047517 ddl 5079262 ddl Shewanella putrefaciens CN-32 D-alanyl-alanine synthetase A YP_001183324.1 2046504 R 319224 CDS YP_001183325.1 146292901 5079263 2047864..2048649 1 NC_009438.1 SMART: extracellular solute-binding protein, family 3; KEGG: dvu:DVU0852 extracellular solute-binding protein, putative; extracellular solute-binding protein 2048649 5079263 Sputcn32_1802 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001183325.1 2047864 D 319224 CDS YP_001183326.1 146292902 5079264 complement(2048787..2050187) 1 NC_009438.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2050187 asnC 5079264 asnC Shewanella putrefaciens CN-32 asparaginyl-tRNA synthetase YP_001183326.1 2048787 R 319224 CDS YP_001183327.1 146292903 5079265 2050338..2050673 1 NC_009438.1 KEGG: shm:Shewmr7_2203 hypothetical protein; hypothetical protein 2050673 5079265 Sputcn32_1804 Shewanella putrefaciens CN-32 hypothetical protein YP_001183327.1 2050338 D 319224 CDS YP_001183328.1 146292904 5079266 complement(2050694..2051278) 1 NC_009438.1 PFAM: NUDIX hydrolase; KEGG: she:Shewmr4_2126 NUDIX hydrolase; NUDIX hydrolase 2051278 5079266 Sputcn32_1805 Shewanella putrefaciens CN-32 NUDIX hydrolase YP_001183328.1 2050694 R 319224 CDS YP_001183329.1 146292905 5079267 complement(2051318..2052718) 1 NC_009438.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I and chorismate binding protein; Anthranilate synthase component I domain protein; KEGG: son:SO2221 para-aminobenzoate synthase, component I; para-aminobenzoate synthase subunit I 2052718 5079267 Sputcn32_1806 Shewanella putrefaciens CN-32 para-aminobenzoate synthase subunit I YP_001183329.1 2051318 R 319224 CDS YP_001183330.1 146292906 5079268 2052838..2054382 1 NC_009438.1 TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type hydro-lyases tartrate/fumarate beta region; KEGG: son:SO2222 fumarate hydratase, class I, anaerobic, putative; tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha 2054382 5079268 Sputcn32_1807 Shewanella putrefaciens CN-32 tartrate/fumarate subfamily Fe-S type hydro-lyase subunit alpha YP_001183330.1 2052838 D 319224 CDS YP_001183331.1 146292907 5079269 2054642..2056705 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: shm:Shewmr7_2199 peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9 prolyl oligopeptidase 2056705 5079269 Sputcn32_1808 Shewanella putrefaciens CN-32 peptidase S9 prolyl oligopeptidase YP_001183331.1 2054642 D 319224 CDS YP_001183332.1 146292908 5079270 2056901..2057359 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_2122 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 2057359 5079270 Sputcn32_1809 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183332.1 2056901 D 319224 CDS YP_001183333.1 146292909 5079271 2057430..2058365 1 NC_009438.1 KEGG: she:Shewmr4_2121 hypothetical protein; hypothetical protein 2058365 5079271 Sputcn32_1810 Shewanella putrefaciens CN-32 hypothetical protein YP_001183333.1 2057430 D 319224 CDS YP_001183334.1 146292910 5079177 complement(2058566..2061178) 1 NC_009438.1 PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: she:Shewmr4_1683 iron-containing alcohol dehydrogenase; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2061178 5079177 Sputcn32_1811 Shewanella putrefaciens CN-32 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_001183334.1 2058566 R 319224 CDS YP_001183335.1 146292911 5079178 2061496..2062128 1 NC_009438.1 PFAM: multiple antibiotic resistance (MarC)-related proteins; KEGG: son:SO2137 multiple antibiotic resistance protein; hypothetical protein 2062128 5079178 Sputcn32_1812 Shewanella putrefaciens CN-32 hypothetical protein YP_001183335.1 2061496 D 319224 CDS YP_001183336.1 146292912 5079179 2062385..2064379 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: shm:Shewmr7_1760 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2064379 5079179 Sputcn32_1813 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183336.1 2062385 D 319224 CDS YP_001183337.1 146292913 5079182 complement(2065072..2066220) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_A4906 major facilitator superfamily (MFS_1) transporter; major facilitator superfamily transporter 2066220 5079182 Sputcn32_1815 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001183337.1 2065072 R 319224 CDS YP_001183338.1 146292914 5079183 complement(2066223..2067440) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: pfl:PFL_3980 major facilitator family transporter; major facilitator superfamily transporter 2067440 5079183 Sputcn32_1816 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001183338.1 2066223 R 319224 CDS YP_001183339.1 146292915 5079184 complement(2067437..2068630) 1 NC_009438.1 PFAM: beta-lactamase; KEGG: pae:PA2315 hypothetical protein; beta-lactamase 2068630 5079184 Sputcn32_1817 Shewanella putrefaciens CN-32 beta-lactamase YP_001183339.1 2067437 R 319224 CDS YP_001183340.1 146292916 5079185 2068767..2069660 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: pae:PA2316 probable transcriptional regulator; LysR family transcriptional regulator 2069660 5079185 Sputcn32_1818 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183340.1 2068767 D 319224 CDS YP_001183341.1 146292917 5079186 2070103..2071080 1 NC_009438.1 TIGRFAM: CRISPR-associated protein Cas1; KEGG: ppr:PBPRB1995 hypothetical protein; CRISPR-associated Cas1 family protein 2071080 5079186 Sputcn32_1819 Shewanella putrefaciens CN-32 CRISPR-associated Cas1 family protein YP_001183341.1 2070103 D 319224 CDS YP_001183342.1 146292918 5079187 2071093..2074029 1 NC_009438.1 SMART: DEAD-like helicases-like; KEGG: ppr:PBPRB1994 hypothetical protein; DEAD/DEAH box helicase 2074029 5079187 Sputcn32_1820 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001183342.1 2071093 D 319224 CDS YP_001183343.1 146292919 5079188 2074033..2074980 1 NC_009438.1 KEGG: ppr:PBPRB1993 hypothetical protein; hypothetical protein 2074980 5079188 Sputcn32_1821 Shewanella putrefaciens CN-32 hypothetical protein YP_001183343.1 2074033 D 319224 CDS YP_001183344.1 146292920 5079189 2074989..2075999 1 NC_009438.1 KEGG: ppr:PBPRB1992 hypothetical protein; hypothetical protein 2075999 5079189 Sputcn32_1822 Shewanella putrefaciens CN-32 hypothetical protein YP_001183344.1 2074989 D 319224 CDS YP_001183345.1 146292921 5079190 2076008..2076559 1 NC_009438.1 TIGRFAM: CRISPR-associated protein, Csy4 family; KEGG: ppr:PBPRB1991 hypothetical protein; CRISPR-associated Csy4 family protein 2076559 5079190 Sputcn32_1823 Shewanella putrefaciens CN-32 CRISPR-associated Csy4 family protein YP_001183345.1 2076008 D 319224 CDS YP_001183346.1 146292922 5079191 2081819..2083813 1 NC_009438.1 SMART: helicase c2; KEGG: shm:Shewmr7_2172 helicase C2; helicase c2 2083813 5079191 Sputcn32_1824 Shewanella putrefaciens CN-32 helicase c2 YP_001183346.1 2081819 D 319224 CDS YP_001183347.1 146292923 5079192 complement(2083987..2084277) 1 NC_009438.1 KEGG: shm:Shewmr7_2388 cytochrome c3; cytochrome c3 2084277 5079192 Sputcn32_1825 Shewanella putrefaciens CN-32 cytochrome c3 YP_001183347.1 2083987 R 319224 CDS YP_001183348.1 146292924 5079193 complement(2084864..2086849) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_1806 TonB-dependent receptor; TonB-dependent receptor 2086849 5079193 Sputcn32_1826 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183348.1 2084864 R 319224 CDS YP_001183349.1 146292925 5079194 complement(2087039..2088547) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_2170 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2088547 5079194 Sputcn32_1827 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183349.1 2087039 R 319224 CDS YP_001183350.1 146292926 5079195 2089072..2090055 1 NC_009438.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2090055 pheS 5079195 pheS Shewanella putrefaciens CN-32 phenylalanyl-tRNA synthetase subunit alpha YP_001183350.1 2089072 D 319224 CDS YP_001183351.1 146292927 5079196 2090071..2092458 1 NC_009438.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2092458 pheT 5079196 pheT Shewanella putrefaciens CN-32 phenylalanyl-tRNA synthetase subunit beta YP_001183351.1 2090071 D 319224 CDS YP_001183352.1 146292928 5079197 2092462..2092758 1 NC_009438.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2092758 ihfA 5079197 ihfA Shewanella putrefaciens CN-32 integration host factor subunit alpha YP_001183352.1 2092462 D 319224 CDS YP_001183353.1 146292929 5079198 2092855..2093796 1 NC_009438.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2093796 5079198 Sputcn32_1831 Shewanella putrefaciens CN-32 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_001183353.1 2092855 D 319224 CDS YP_001183354.1 146292930 5079199 complement(2093933..2094280) 1 NC_009438.1 TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis, HypA; KEGG: shm:Shewmr7_2165 hydrogenase nickel insertion protein HypA; hydrogenase nickel incorporation protein HypA 2094280 5079199 Sputcn32_1832 Shewanella putrefaciens CN-32 hydrogenase nickel incorporation protein HypA YP_001183354.1 2093933 R 319224 CDS YP_001183355.1 146292931 5079200 complement(2094280..2095296) 1 NC_009438.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: shm:Shewmr7_2164 hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypE 2095296 5079200 Sputcn32_1833 Shewanella putrefaciens CN-32 hydrogenase expression/formation protein HypE YP_001183355.1 2094280 R 319224 CDS YP_001183356.1 146292932 5079201 complement(2095289..2096428) 1 NC_009438.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: son:SO2091 hydrogenase expression/formation protein HypD; hydrogenase expression/formation protein HypD 2096428 5079201 Sputcn32_1834 Shewanella putrefaciens CN-32 hydrogenase expression/formation protein HypD YP_001183356.1 2095289 R 319224 CDS YP_001183357.1 146292933 5079202 complement(2096490..2096735) 1 NC_009438.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: son:SO2092 hydrogenase assembly chaperone hypC/hupF; hydrogenase assembly chaperone HypC/HupF 2096735 5079202 Sputcn32_1835 Shewanella putrefaciens CN-32 hydrogenase assembly chaperone HypC/HupF YP_001183357.1 2096490 R 319224 CDS YP_001183358.1 146292934 5079203 complement(2096735..2097517) 1 NC_009438.1 TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein, P47K; KEGG: son:SO2093 hydrogenase accessory protein HypB; hydrogenase nickel incorporation protein HypB 2097517 5079203 Sputcn32_1836 Shewanella putrefaciens CN-32 hydrogenase nickel incorporation protein HypB YP_001183358.1 2096735 R 319224 CDS YP_001183359.1 146292935 5079204 complement(2097792..2100491) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: she:Shewmr4_2098 CoA-binding domain protein; CoA-binding domain-containing protein 2100491 5079204 Sputcn32_1837 Shewanella putrefaciens CN-32 CoA-binding domain-containing protein YP_001183359.1 2097792 R 319224 CDS YP_001183360.1 146292936 5079205 2100693..2101280 1 NC_009438.1 KEGG: pfl:PFL_3338 hypothetical protein; hypothetical protein 2101280 5079205 Sputcn32_1838 Shewanella putrefaciens CN-32 hypothetical protein YP_001183360.1 2100693 D 319224 CDS YP_001183361.1 146292937 5079206 complement(2101406..2103016) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2525 ABC transporter, ATP-binding protein; ABC transporter-like protein 2103016 5079206 Sputcn32_1839 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001183361.1 2101406 R 319224 CDS YP_001183362.1 146292938 5079207 2103228..2104016 1 NC_009438.1 KEGG: shm:Shewmr7_1896 hypothetical protein; hypothetical protein 2104016 5079207 Sputcn32_1840 Shewanella putrefaciens CN-32 hypothetical protein YP_001183362.1 2103228 D 319224 CDS YP_001183363.1 146292939 5079208 complement(2104218..2106308) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: ilo:IL2511 outer membrane receptor for ferric siderophore; TonB-dependent siderophore receptor 2106308 5079208 Sputcn32_1841 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001183363.1 2104218 R 319224 CDS YP_001183364.1 146292940 5079209 2106437..2107606 1 NC_009438.1 PFAM: Propeptide, PepSY amd peptidase M4; PepSY-associated TM helix domain protein; KEGG: shm:Shewmr7_1899 PepSY-associated TM helix domain protein; peptidase 2107606 5079209 Sputcn32_1842 Shewanella putrefaciens CN-32 peptidase YP_001183364.1 2106437 D 319224 CDS YP_001183365.1 146292941 5079210 2107606..2108073 1 NC_009438.1 KEGG: she:Shewmr4_2075 hypothetical protein; hypothetical protein 2108073 5079210 Sputcn32_1843 Shewanella putrefaciens CN-32 hypothetical protein YP_001183365.1 2107606 D 319224 CDS YP_001183366.1 146292942 5079211 complement(2108124..2108765) 1 NC_009438.1 KEGG: she:Shewmr4_2070 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop; endonuclease III 2108765 5079211 Sputcn32_1844 Shewanella putrefaciens CN-32 endonuclease III YP_001183366.1 2108124 R 319224 CDS YP_001183367.1 146292943 5079212 complement(2108781..2109479) 1 NC_009438.1 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex protein RsxE 2109479 5079212 Sputcn32_1845 Shewanella putrefaciens CN-32 electron transport complex protein RsxE YP_001183367.1 2108781 R 319224 CDS YP_001183368.1 146292944 5079213 complement(2109472..2110098) 1 NC_009438.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2110098 5079213 Sputcn32_1846 Shewanella putrefaciens CN-32 electron transport complex protein RnfG YP_001183368.1 2109472 R 319224 CDS YP_001183369.1 146292945 5079214 complement(2110165..2111214) 1 NC_009438.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 2111214 rnfD 5079214 rnfD Shewanella putrefaciens CN-32 electron transport complex protein RnfD YP_001183369.1 2110165 R 319224 CDS YP_001183370.1 146292946 5079215 complement(2111280..2113661) 1 NC_009438.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 2113661 5079215 Sputcn32_1848 Shewanella putrefaciens CN-32 electron transport complex protein RnfC YP_001183370.1 2111280 R 319224 CDS YP_001183371.1 146292947 5079216 complement(2113655..2114254) 1 NC_009438.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2114254 5079216 Sputcn32_1849 Shewanella putrefaciens CN-32 electron transport complex protein RnfB YP_001183371.1 2113655 R 319224 CDS YP_001183372.1 146292948 5079217 complement(2114256..2114834) 1 NC_009438.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: shm:Shewmr7_1911 electron transport complex, RnfABCDGE type, A subunit; Na(+)-translocating NADH-quinone reductase subunit E 2114834 5079217 Sputcn32_1850 Shewanella putrefaciens CN-32 Na(+)-translocating NADH-quinone reductase subunit E YP_001183372.1 2114256 R 319224 CDS YP_001183373.1 146292949 5079218 complement(2114960..2116864) 1 NC_009438.1 PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: shm:Shewmr7_1912 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 2116864 5079218 Sputcn32_1851 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001183373.1 2114960 R 319224 CDS YP_001183374.1 146292950 5080160 2118525..2120531 1 NC_009438.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2120531 5080160 Sputcn32_1852 Shewanella putrefaciens CN-32 excinuclease ABC subunit B YP_001183374.1 2118525 D 319224 CDS YP_001183375.1 146292951 5080161 complement(2120613..2121179) 1 NC_009438.1 PFAM: Rhomboid family protein; KEGG: she:Shewmr4_2060 rhomboid family protein; rhomboid family protein 2121179 5080161 Sputcn32_1853 Shewanella putrefaciens CN-32 rhomboid family protein YP_001183375.1 2120613 R 319224 CDS YP_001183376.1 146292952 5080162 complement(2121206..2121943) 1 NC_009438.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC 2121943 5080162 Sputcn32_1854 Shewanella putrefaciens CN-32 queuosine biosynthesis protein QueC YP_001183376.1 2121206 R 319224 CDS YP_001183377.1 146292953 5080163 2122115..2122783 1 NC_009438.1 KEGG: son:SO2501 radical activating enzyme; radical activating enzyme 2122783 5080163 Sputcn32_1855 Shewanella putrefaciens CN-32 radical activating enzyme YP_001183377.1 2122115 D 319224 CDS YP_001183378.1 146292954 5080167 2123520..2124008 1 NC_009438.1 KEGG: she:Shewmr4_2057 hypothetical protein; hypothetical protein 2124008 5080167 Sputcn32_1856 Shewanella putrefaciens CN-32 hypothetical protein YP_001183378.1 2123520 D 319224 CDS YP_001183379.1 146292955 5080168 2124153..2124488 1 NC_009438.1 KEGG: son:SO2499 hypothetical protein; hypothetical protein 2124488 5080168 Sputcn32_1857 Shewanella putrefaciens CN-32 hypothetical protein YP_001183379.1 2124153 D 319224 CDS YP_001183380.1 146292956 5080169 2124679..2126862 1 NC_009438.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; PAS fold domain protein; KEGG: she:Shewmr4_2055 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2126862 5080169 Sputcn32_1858 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001183380.1 2124679 D 319224 CDS YP_001183381.1 146292957 5080170 complement(2126953..2127444) 1 NC_009438.1 PFAM: SEC-C motif domain protein; KEGG: shm:Shewmr7_1921 sec-C motif domain protein; SecC motif-containing protein 2127444 5080170 Sputcn32_1859 Shewanella putrefaciens CN-32 SecC motif-containing protein YP_001183381.1 2126953 R 319224 CDS YP_001183382.1 146292958 5080171 complement(2127473..2128057) 1 NC_009438.1 KEGG: she:Shewmr4_2053 hypothetical protein; hypothetical protein 2128057 5080171 Sputcn32_1860 Shewanella putrefaciens CN-32 hypothetical protein YP_001183382.1 2127473 R 319224 CDS YP_001183383.1 146292959 5080172 2128192..2128782 1 NC_009438.1 PFAM: Smr protein/MutS2; KEGG: she:Shewmr4_2052 Smr protein/MutS2; Smr protein/MutS2 2128782 5080172 Sputcn32_1861 Shewanella putrefaciens CN-32 Smr protein/MutS2 YP_001183383.1 2128192 D 319224 CDS YP_001183384.1 146292960 5080173 2129059..2129700 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_1925 transcriptional regulator, TetR family; TetR family transcriptional regulator 2129700 5080173 Sputcn32_1862 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001183384.1 2129059 D 319224 CDS YP_001183385.1 146292961 5080174 2129713..2131992 1 NC_009438.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 2131992 5080174 Sputcn32_1863 Shewanella putrefaciens CN-32 acyl-CoA dehydrogenase YP_001183385.1 2129713 D 319224 CDS YP_001183386.1 146292962 5080175 complement(2132146..2133585) 1 NC_009438.1 PFAM: pyruvate kinase; KEGG: shm:Shewmr7_1927 pyruvate kinase; pyruvate kinase 2133585 5080175 Sputcn32_1864 Shewanella putrefaciens CN-32 pyruvate kinase YP_001183386.1 2132146 R 319224 CDS YP_001183387.1 146292963 5080176 complement(2133770..2134624) 1 NC_009438.1 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2134624 5080176 Sputcn32_1865 Shewanella putrefaciens CN-32 DNA-binding transcriptional regulator HexR YP_001183387.1 2133770 R 319224 CDS YP_001183388.1 146292964 5080177 2134935..2136407 1 NC_009438.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2136407 5080177 Sputcn32_1866 Shewanella putrefaciens CN-32 glucose-6-phosphate 1-dehydrogenase YP_001183388.1 2134935 D 319224 CDS YP_001183389.1 146292965 5080178 2136417..2137115 1 NC_009438.1 TIGRFAM: 6-phosphogluconolactonase; KEGG: son:SO2488 6-phosphogluconolactonase; 6-phosphogluconolactonase 2137115 5080178 Sputcn32_1867 Shewanella putrefaciens CN-32 6-phosphogluconolactonase YP_001183389.1 2136417 D 319224 CDS YP_001183390.1 146292966 5080179 2137125..2138966 1 NC_009438.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 2138966 5080179 Sputcn32_1868 Shewanella putrefaciens CN-32 phosphogluconate dehydratase YP_001183390.1 2137125 D 319224 CDS YP_001183391.1 146292967 5080180 2138944..2139627 1 NC_009438.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2139627 5080180 Sputcn32_1869 Shewanella putrefaciens CN-32 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_001183391.1 2138944 D 319224 CDS YP_001183392.1 146292968 5080181 complement(2139817..2141166) 1 NC_009438.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 2141166 5080181 Sputcn32_1870 Shewanella putrefaciens CN-32 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_001183392.1 2139817 R 319224 CDS YP_001183393.1 146292969 5080182 complement(2141192..2141779) 1 NC_009438.1 KEGG: shm:Shewmr7_1934 metal dependent phosphohydrolase; hypothetical protein 2141779 5080182 Sputcn32_1871 Shewanella putrefaciens CN-32 hypothetical protein YP_001183393.1 2141192 R 319224 CDS YP_001183394.1 146292970 5080183 complement(2142062..2143276) 1 NC_009438.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 2143276 5080183 Sputcn32_1872 Shewanella putrefaciens CN-32 aminotransferase AlaT YP_001183394.1 2142062 R 319224 CDS YP_001183395.1 146292971 5080184 2144062..2145444 1 NC_009438.1 PFAM: Na+/H+ antiporter NhaC; KEGG: shm:Shewmr7_1936 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 2145444 5080184 Sputcn32_1873 Shewanella putrefaciens CN-32 Na+/H+ antiporter NhaC YP_001183395.1 2144062 D 319224 CDS YP_001183396.1 146292972 5080185 2145658..2146479 1 NC_009438.1 KEGG: she:Shewmr4_1801 hypothetical protein; hypothetical protein 2146479 5080185 Sputcn32_1874 Shewanella putrefaciens CN-32 hypothetical protein YP_001183396.1 2145658 D 319224 CDS YP_001183397.1 146292973 5080186 complement(2146661..2147221) 1 NC_009438.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2147221 5080186 Sputcn32_1875 Shewanella putrefaciens CN-32 elongation factor P YP_001183397.1 2146661 R 319224 CDS YP_001183398.1 146292974 5080187 complement(2147266..2148444) 1 NC_009438.1 KEGG: shm:Shewmr7_1938 hypothetical protein; hypothetical protein 2148444 5080187 Sputcn32_1876 Shewanella putrefaciens CN-32 hypothetical protein YP_001183398.1 2147266 R 319224 CDS YP_001183399.1 146292975 5080188 complement(2148554..2149081) 1 NC_009438.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 2149081 5080188 Sputcn32_1877 Shewanella putrefaciens CN-32 flavodoxin FldA YP_001183399.1 2148554 R 319224 CDS YP_001183400.1 146292976 5080189 complement(2149138..2149410) 1 NC_009438.1 KEGG: shm:Shewmr7_1940 CopG domain protein DNA-binding domain protein; LexA regulated protein 2149410 5080189 Sputcn32_1878 Shewanella putrefaciens CN-32 LexA regulated protein YP_001183400.1 2149138 R 319224 CDS YP_001183401.1 146292977 5080190 complement(2149422..2149643) 1 NC_009438.1 KEGG: shm:Shewmr7_1941 hypothetical protein; hypothetical protein 2149643 5080190 Sputcn32_1879 Shewanella putrefaciens CN-32 hypothetical protein YP_001183401.1 2149422 R 319224 CDS YP_001183402.1 146292978 5080191 complement(2149745..2150521) 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: shm:Shewmr7_1942 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 2150521 5080191 Sputcn32_1880 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001183402.1 2149745 R 319224 CDS YP_001183403.1 146292979 5080192 2150804..2151361 1 NC_009438.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 2151361 5080192 Sputcn32_1881 Shewanella putrefaciens CN-32 replication initiation regulator SeqA YP_001183403.1 2150804 D 319224 CDS YP_001183404.1 146292980 5080193 2151408..2153060 1 NC_009438.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2153060 5080193 Sputcn32_1882 Shewanella putrefaciens CN-32 phosphoglucomutase YP_001183404.1 2151408 D 319224 CDS YP_001183405.1 146292981 5080194 complement(2153144..2153623) 1 NC_009438.1 KEGG: son:SO2337 peptide methionine sulfoxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 2153623 5080194 Sputcn32_1883 Shewanella putrefaciens CN-32 peptide methionine sulfoxide reductase YP_001183405.1 2153144 R 319224 CDS YP_001183406.1 146292982 5080195 2153920..2154954 1 NC_009438.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; succinylglutamate desuccinylase 2154954 5080195 Sputcn32_1884 Shewanella putrefaciens CN-32 succinylglutamate desuccinylase YP_001183406.1 2153920 D 319224 CDS YP_001183407.1 146292983 5080196 2155117..2156295 1 NC_009438.1 PFAM: dehydrogenase, E1 component; KEGG: shm:Shewmr7_1947 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); 3-methyl-2-oxobutanoate dehydrogenase 2156295 5080196 Sputcn32_1885 Shewanella putrefaciens CN-32 3-methyl-2-oxobutanoate dehydrogenase YP_001183407.1 2155117 D 319224 CDS YP_001183408.1 146292984 5080197 2156299..2157276 1 NC_009438.1 PFAM: Transketolase, central region; Transketolase domain protein; KEGG: shm:Shewmr7_1948 transketolase, central region; transketolase, central region 2157276 5080197 Sputcn32_1886 Shewanella putrefaciens CN-32 transketolase, central region YP_001183408.1 2156299 D 319224 CDS YP_001183409.1 146292985 5080198 2157286..2158908 1 NC_009438.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: shm:Shewmr7_1949 catalytic domain of components of various dehydrogenase complexes; dihydrolipoamide acetyltransferase 2158908 5080198 Sputcn32_1887 Shewanella putrefaciens CN-32 dihydrolipoamide acetyltransferase YP_001183409.1 2157286 D 319224 CDS YP_001183410.1 146292986 5080199 2159041..2160123 1 NC_009438.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2160123 5080199 Sputcn32_1888 Shewanella putrefaciens CN-32 quinolinate synthetase YP_001183410.1 2159041 D 319224 CDS YP_001183411.1 146292987 5080200 complement(2160282..2161292) 1 NC_009438.1 KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I 2161292 5080200 Sputcn32_1889 Shewanella putrefaciens CN-32 glyceraldehyde-3-phosphate dehydrogenase, type I YP_001183411.1 2160282 R 319224 CDS YP_001183412.1 146292988 5080201 complement(2161499..2162344) 1 NC_009438.1 KEGG: she:Shewmr4_2022 hypothetical protein; hypothetical protein 2162344 5080201 Sputcn32_1890 Shewanella putrefaciens CN-32 hypothetical protein YP_001183412.1 2161499 R 319224 CDS YP_001183413.1 146292989 5080202 2162590..2164023 1 NC_009438.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; involved in growth under gluconeogenic conditions and in glycolytic activity at high ATP concentrations in Corynebacterium; NAD and NADP dependent; glyceraldehyde-3-phosphate dehydrogenase 2164023 5080202 Sputcn32_1891 Shewanella putrefaciens CN-32 glyceraldehyde-3-phosphate dehydrogenase YP_001183413.1 2162590 D 319224 CDS YP_001183414.1 146292990 5078512 2165570..2167024 1 NC_009438.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: son:SO2109 hypothetical protein; peptidoglycan binding domain-containing protein 2167024 5078512 Sputcn32_1892 Shewanella putrefaciens CN-32 peptidoglycan binding domain-containing protein YP_001183414.1 2165570 D 319224 CDS YP_001183415.1 146292991 5078513 2167148..2167696 1 NC_009438.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: son:SO2110 hypothetical protein; hypothetical protein 2167696 5078513 Sputcn32_1893 Shewanella putrefaciens CN-32 hypothetical protein YP_001183415.1 2167148 D 319224 CDS YP_001183416.1 146292992 5078514 complement(2167647..2168093) 1 NC_009438.1 KEGG: son:SO2111 hypothetical protein; hypothetical protein 2168093 5078514 Sputcn32_1894 Shewanella putrefaciens CN-32 hypothetical protein YP_001183416.1 2167647 R 319224 CDS YP_001183417.1 146292993 5078515 2168383..2168670 1 NC_009438.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 2168670 5078515 Sputcn32_1895 Shewanella putrefaciens CN-32 50S ribosomal protein L25 YP_001183417.1 2168383 D 319224 CDS YP_001183418.1 146292994 5078516 complement(2168810..2172727) 1 NC_009438.1 PFAM: protein of unknown function DUF490; KEGG: she:Shewmr4_1835 protein of unknown function DUF490; hypothetical protein 2172727 5078516 Sputcn32_1896 Shewanella putrefaciens CN-32 hypothetical protein YP_001183418.1 2168810 R 319224 CDS YP_001183419.1 146292995 5078517 complement(2172724..2174589) 1 NC_009438.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: son:SO2114 hypothetical protein; surface antigen (D15) 2174589 5078517 Sputcn32_1897 Shewanella putrefaciens CN-32 surface antigen (D15) YP_001183419.1 2172724 R 319224 CDS YP_001183420.1 146292996 5078518 2174698..2175729 1 NC_009438.1 PFAM: peptidase T2, asparaginase 2; KEGG: shm:Shewmr7_2140 peptidase T2, asparaginase 2; peptidase T2, asparaginase 2 2175729 5078518 Sputcn32_1898 Shewanella putrefaciens CN-32 peptidase T2, asparaginase 2 YP_001183420.1 2174698 D 319224 CDS YP_001183421.1 146292997 5078519 2175852..2176268 1 NC_009438.1 PFAM: CBS domain containing protein; KEGG: shm:Shewmr7_2139 putative signal transduction protein with CBS domains; signal transduction protein 2176268 5078519 Sputcn32_1899 Shewanella putrefaciens CN-32 signal transduction protein YP_001183421.1 2175852 D 319224 CDS YP_001183422.1 146292998 5078520 2176363..2180244 1 NC_009438.1 KEGG: shm:Shewmr7_2138 ATP-dependent helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase domain protein; helicase-associated domain protein; protein of unknown function DUF1605; SMART: AAA ATPase; DEAD-like helicases-like; ATP-dependent helicase HrpA 2180244 5078520 Sputcn32_1900 Shewanella putrefaciens CN-32 ATP-dependent helicase HrpA YP_001183422.1 2176363 D 319224 CDS YP_001183423.1 146292999 5078521 2180768..2180926 1 NC_009438.1 PFAM: periplasmic nitrate reductase NapE; KEGG: shm:Shewmr7_2137 periplasmic nitrate reductase NapE; periplasmic nitrate reductase NapE 2180926 5078521 Sputcn32_1901 Shewanella putrefaciens CN-32 periplasmic nitrate reductase NapE YP_001183423.1 2180768 D 319224 CDS YP_001183424.1 146293000 5078522 2180970..2181227 1 NC_009438.1 PFAM: NapD family protein; KEGG: shm:Shewmr7_2136 NapD family protein; NapD family protein 2181227 5078522 Sputcn32_1902 Shewanella putrefaciens CN-32 NapD family protein YP_001183424.1 2180970 D 319224 CDS YP_001183425.1 146293001 5078523 2181230..2183719 1 NC_009438.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2183719 5078523 Sputcn32_1903 Shewanella putrefaciens CN-32 nitrate reductase catalytic subunit YP_001183425.1 2181230 D 319224 CDS YP_001183426.1 146293002 5078524 2183730..2184215 1 NC_009438.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: she:Shewmr4_1843 nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit 2184215 5078524 Sputcn32_1904 Shewanella putrefaciens CN-32 nitrate reductase cytochrome c-type subunit YP_001183426.1 2183730 D 319224 CDS YP_001183427.1 146293003 5078525 2184224..2184811 1 NC_009438.1 TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; KEGG: shm:Shewmr7_2133 periplasmic nitrate (or nitrite) reductase C-type cytochrome, NapC/NirT family; NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome 2184811 5078525 Sputcn32_1905 Shewanella putrefaciens CN-32 NapC/NirT family periplasmic nitrate (or nitrite) reductase c-type cytochrome YP_001183427.1 2184224 D 319224 CDS YP_001183428.1 146293004 5078526 2184956..2185336 1 NC_009438.1 KEGG: rba:RB11509 hypothetical protein; hypothetical protein 2185336 5078526 Sputcn32_1906 Shewanella putrefaciens CN-32 hypothetical protein YP_001183428.1 2184956 D 319224 CDS YP_001183429.1 146293005 5078527 2185333..2185683 1 NC_009438.1 KEGG: son:SO2234 hypothetical protein; hypothetical protein 2185683 5078527 Sputcn32_1907 Shewanella putrefaciens CN-32 hypothetical protein YP_001183429.1 2185333 D 319224 CDS YP_001183430.1 146293006 5078528 2185771..2186931 1 NC_009438.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: cps:CPS_2133 hypothetical protein; cupin 4 family protein 2186931 5078528 Sputcn32_1908 Shewanella putrefaciens CN-32 cupin 4 family protein YP_001183430.1 2185771 D 319224 CDS YP_001183431.1 146293007 5078529 complement(2187050..2188441) 1 NC_009438.1 PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: shm:Shewmr7_2111 sodium/sulphate symporter; sodium/sulfate symporter 2188441 5078529 Sputcn32_1909 Shewanella putrefaciens CN-32 sodium/sulfate symporter YP_001183431.1 2187050 R 319224 CDS YP_001183432.1 146293008 5078530 2188522..2189322 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: shm:Shewmr7_2110 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 2189322 5078530 Sputcn32_1910 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001183432.1 2188522 D 319224 CDS YP_001183433.1 146293009 5078531 2189376..2189669 1 NC_009438.1 PFAM: YCII-related; KEGG: son:SO2457 hypothetical protein; hypothetical protein 2189669 5078531 Sputcn32_1911 Shewanella putrefaciens CN-32 hypothetical protein YP_001183433.1 2189376 D 319224 CDS YP_001183434.1 146293010 5078532 2190283..2191248 1 NC_009438.1 KEGG: son:SO2451 hypothetical protein; hypothetical protein 2191248 5078532 Sputcn32_1912 Shewanella putrefaciens CN-32 hypothetical protein YP_001183434.1 2190283 D 319224 CDS YP_001183435.1 146293011 5078533 complement(2191317..2191766) 1 NC_009438.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: shm:Shewmr7_2104 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase 2191766 5078533 Sputcn32_1913 Shewanella putrefaciens CN-32 alkylhydroperoxidase YP_001183435.1 2191317 R 319224 CDS YP_001183436.1 146293012 5078534 complement(2191804..2192700) 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; KEGG: she:Shewmr4_1875 transcriptional regulator, AraC family; helix-turn-helix domain-containing protein 2192700 5078534 Sputcn32_1914 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001183436.1 2191804 R 319224 CDS YP_001183437.1 146293013 5078535 complement(2192945..2193814) 1 NC_009438.1 PFAM: UspA domain protein; KEGG: sfr:Sfri_2734 hypothetical protein; UspA domain-containing protein 2193814 5078535 Sputcn32_1915 Shewanella putrefaciens CN-32 UspA domain-containing protein YP_001183437.1 2192945 R 319224 CDS YP_001183438.1 146293014 5078536 2194131..2194868 1 NC_009438.1 KEGG: son:SO2449 hypothetical protein; hypothetical protein 2194868 5078536 Sputcn32_1916 Shewanella putrefaciens CN-32 hypothetical protein YP_001183438.1 2194131 D 319224 CDS YP_001183439.1 146293015 5078537 2195123..2198209 1 NC_009438.1 KEGG: cvi:CV2953 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2198209 5078537 Sputcn32_1917 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001183439.1 2195123 D 319224 CDS YP_001183440.1 146293016 5078538 2198330..2198863 1 NC_009438.1 PFAM: NUDIX hydrolase; KEGG: son:SO2448 MutT/nudix family protein; NUDIX hydrolase 2198863 5078538 Sputcn32_1918 Shewanella putrefaciens CN-32 NUDIX hydrolase YP_001183440.1 2198330 D 319224 CDS YP_001183441.1 146293017 5078539 2198919..2199413 1 NC_009438.1 PFAM: DTW domain containing protein; KEGG: sfr:Sfri_1306 DTW domain containing protein; DTW domain-containing protein 2199413 5078539 Sputcn32_1919 Shewanella putrefaciens CN-32 DTW domain-containing protein YP_001183441.1 2198919 D 319224 CDS YP_001183442.1 146293018 5078540 complement(2199464..2200147) 1 NC_009438.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: she:Shewmr4_1879 channel protein, hemolysin III family; hemolysin III family channel protein 2200147 5078540 Sputcn32_1920 Shewanella putrefaciens CN-32 hemolysin III family channel protein YP_001183442.1 2199464 R 319224 CDS YP_001183443.1 146293019 5078541 2200525..2201613 1 NC_009438.1 KEGG: son:SO2446 hypothetical protein; hypothetical protein 2201613 5078541 Sputcn32_1921 Shewanella putrefaciens CN-32 hypothetical protein YP_001183443.1 2200525 D 319224 CDS YP_001183444.1 146293020 5078542 2202079..2204217 1 NC_009438.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2204217 5078542 Sputcn32_1922 Shewanella putrefaciens CN-32 thiamine biosynthesis protein ThiC YP_001183444.1 2202079 D 319224 CDS YP_001183445.1 146293021 5078543 2204250..2206163 1 NC_009438.1 KEGG: shm:Shewmr7_2096 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Phosphomethylpyrimidine kinase type-1; thiamine-phosphate pyrophosphorylase 2206163 5078543 Sputcn32_1923 Shewanella putrefaciens CN-32 thiamine-phosphate pyrophosphorylase YP_001183445.1 2204250 D 319224 CDS YP_001183446.1 146293022 5078544 2206147..2207058 1 NC_009438.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: she:Shewmr4_1883 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 2207058 5078544 Sputcn32_1924 Shewanella putrefaciens CN-32 UBA/THIF-type NAD/FAD binding protein YP_001183446.1 2206147 D 319224 CDS YP_001183447.1 146293023 5078545 2207060..2207263 1 NC_009438.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: son:SO2442 thiS protein, putative; thiamine biosynthesis protein ThiS 2207263 5078545 Sputcn32_1925 Shewanella putrefaciens CN-32 thiamine biosynthesis protein ThiS YP_001183447.1 2207060 D 319224 CDS YP_001183448.1 146293024 5078546 2207265..2208029 1 NC_009438.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2208029 thiG 5078546 thiG Shewanella putrefaciens CN-32 thiazole synthase YP_001183448.1 2207265 D 319224 CDS YP_001183449.1 146293025 5078547 2208026..2209141 1 NC_009438.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 2209141 thiH 5078547 thiH Shewanella putrefaciens CN-32 thiamine biosynthesis protein ThiH YP_001183449.1 2208026 D 319224 CDS YP_001183450.1 146293026 5078548 2209243..2209506 1 NC_009438.1 KEGG: son:SO2439.2 hypothetical methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 2209506 5078548 Sputcn32_1928 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis protein YP_001183450.1 2209243 D 319224 CDS YP_001183451.1 146293027 5078549 2209512..2211308 1 NC_009438.1 KEGG: she:Shewmr4_1888 SrpA-related protein; SrpA-like protein 2211308 5078549 Sputcn32_1929 Shewanella putrefaciens CN-32 SrpA-like protein YP_001183451.1 2209512 D 319224 CDS YP_001183452.1 146293028 5078550 complement(2211352..2212263) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO2438 transcriptional regulator, LysR family; LysR family transcriptional regulator 2212263 5078550 Sputcn32_1930 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183452.1 2211352 R 319224 CDS YP_001183453.1 146293029 5078551 complement(2212370..2214121) 1 NC_009438.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: shm:Shewmr7_2087 hypothetical protein; peptidase M3A and M3B, thimet/oligopeptidase F 2214121 5078551 Sputcn32_1931 Shewanella putrefaciens CN-32 peptidase M3A and M3B, thimet/oligopeptidase F YP_001183453.1 2212370 R 319224 CDS YP_001183454.1 146293030 5078552 complement(2214114..2215112) 1 NC_009438.1 TIGRFAM: putative methyltransferase; PFAM: methyltransferase, putative; Methyltransferase type 11; Methyltransferase type 12; KEGG: shm:Shewmr7_2083 putative methyltransferase; putative methyltransferase 2215112 5078552 Sputcn32_1932 Shewanella putrefaciens CN-32 putative methyltransferase YP_001183454.1 2214114 R 319224 CDS YP_001183455.1 146293031 5078553 complement(2215109..2215840) 1 NC_009438.1 TIGRFAM: putative methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: she:Shewmr4_1896 putative methyltransferase; putative methyltransferase 2215840 5078553 Sputcn32_1933 Shewanella putrefaciens CN-32 putative methyltransferase YP_001183455.1 2215109 R 319224 CDS YP_001183456.1 146293032 5078554 2215990..2218803 1 NC_009438.1 KEGG: she:Shewmr4_1897 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: extracellular solute-binding protein, family 3; diguanylate cyclase 2218803 5078554 Sputcn32_1934 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001183456.1 2215990 D 319224 CDS YP_001183457.1 146293033 5078555 2218988..2220766 1 NC_009438.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2220766 aspS 5078555 aspS Shewanella putrefaciens CN-32 aspartyl-tRNA synthetase YP_001183457.1 2218988 D 319224 CDS YP_001183458.1 146293034 5078384 2221006..2221752 1 NC_009438.1 PFAM: protein of unknown function DUF28; KEGG: shm:Shewmr7_2079 protein of unknown function DUF28; hypothetical protein 2221752 5078384 Sputcn32_1936 Shewanella putrefaciens CN-32 hypothetical protein YP_001183458.1 2221006 D 319224 CDS YP_001183459.1 146293035 5078385 2221856..2222377 1 NC_009438.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2222377 ruvC 5078385 ruvC Shewanella putrefaciens CN-32 Holliday junction resolvase YP_001183459.1 2221856 D 319224 CDS YP_001183460.1 146293036 5078386 2222374..2222991 1 NC_009438.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2222991 ruvA 5078386 ruvA Shewanella putrefaciens CN-32 Holliday junction DNA helicase RuvA YP_001183460.1 2222374 D 319224 CDS YP_001183461.1 146293037 5078387 2223005..2224009 1 NC_009438.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2224009 ruvB 5078387 ruvB Shewanella putrefaciens CN-32 Holliday junction DNA helicase RuvB YP_001183461.1 2223005 D 319224 CDS YP_001183462.1 146293038 5078388 2224931..2227447 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_1903 TonB-dependent receptor; TonB-dependent receptor 2227447 5078388 Sputcn32_1940 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183462.1 2224931 D 319224 CDS YP_001183463.1 146293039 5078389 2227617..2228327 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2426 DNA-binding response regulator; two component transcriptional regulator 2228327 5078389 Sputcn32_1941 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001183463.1 2227617 D 319224 CDS YP_001183464.1 146293040 5078390 2228523..2229650 1 NC_009438.1 PFAM: peptidase M14, carboxypeptidase A; KEGG: shm:Shewmr7_2073 peptidase M14, carboxypeptidase A; peptidase M14, carboxypeptidase A 2229650 5078390 Sputcn32_1942 Shewanella putrefaciens CN-32 peptidase M14, carboxypeptidase A YP_001183464.1 2228523 D 319224 CDS YP_001183465.1 146293041 5078391 2229662..2229979 1 NC_009438.1 KEGG: shm:Shewmr7_2072 hypothetical protein; hypothetical protein 2229979 5078391 Sputcn32_1943 Shewanella putrefaciens CN-32 hypothetical protein YP_001183465.1 2229662 D 319224 CDS YP_001183466.1 146293042 5078392 2229976..2230257 1 NC_009438.1 PFAM: protein of unknown function DUF1315; KEGG: son:SO2422 hypothetical protein; hypothetical protein 2230257 5078392 Sputcn32_1944 Shewanella putrefaciens CN-32 hypothetical protein YP_001183466.1 2229976 D 319224 CDS YP_001183467.1 146293043 5078393 2230560..2231753 1 NC_009438.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2231753 5078393 Sputcn32_1945 Shewanella putrefaciens CN-32 aromatic amino acid aminotransferase YP_001183467.1 2230560 D 319224 CDS YP_001183468.1 146293044 5078394 complement(2231813..2232736) 1 NC_009438.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: shm:Shewmr7_1956 hypothetical protein; hypothetical protein 2232736 5078394 Sputcn32_1946 Shewanella putrefaciens CN-32 hypothetical protein YP_001183468.1 2231813 R 319224 CDS YP_001183469.1 146293045 5078395 2233067..2233879 1 NC_009438.1 KEGG: she:Shewmr4_2018 bax protein, putative; bax protein 2233879 5078395 Sputcn32_1947 Shewanella putrefaciens CN-32 bax protein YP_001183469.1 2233067 D 319224 CDS YP_001183470.1 146293046 5078396 2233866..2234495 1 NC_009438.1 KEGG: son:SO2353 hypothetical protein; hypothetical protein 2234495 5078396 Sputcn32_1948 Shewanella putrefaciens CN-32 hypothetical protein YP_001183470.1 2233866 D 319224 CDS YP_001183471.1 146293047 5078397 complement(2234582..2235514) 1 NC_009438.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2235514 5078397 Sputcn32_1949 Shewanella putrefaciens CN-32 C32 tRNA thiolase YP_001183471.1 2234582 R 319224 CDS YP_001183472.1 146293048 5078398 complement(2235603..2236535) 1 NC_009438.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2236535 5078398 Sputcn32_1950 Shewanella putrefaciens CN-32 universal stress protein UspE YP_001183472.1 2235603 R 319224 CDS YP_001183473.1 146293049 5078399 complement(2236711..2237463) 1 NC_009438.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2237463 5078399 Sputcn32_1951 Shewanella putrefaciens CN-32 fumarate/nitrate reduction transcriptional regulator YP_001183473.1 2236711 R 319224 CDS YP_001183474.1 146293050 5078400 complement(2237519..2238211) 1 NC_009438.1 KEGG: son:SO2357 hypothetical protein; hypothetical protein 2238211 5078400 Sputcn32_1952 Shewanella putrefaciens CN-32 hypothetical protein YP_001183474.1 2237519 R 319224 CDS YP_001183475.1 146293051 5078401 complement(2238208..2238456) 1 NC_009438.1 TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type; KEGG: shm:Shewmr7_1963 cytochrome oxidase maturation protein, cbb3-type; cbb3-type cytochrome oxidase maturation protein 2238456 5078401 Sputcn32_1953 Shewanella putrefaciens CN-32 cbb3-type cytochrome oxidase maturation protein YP_001183475.1 2238208 R 319224 CDS YP_001183476.1 146293052 5078402 complement(2238496..2240895) 1 NC_009438.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: she:Shewmr4_2011 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 2240895 5078402 Sputcn32_1954 Shewanella putrefaciens CN-32 heavy metal translocating P-type ATPase YP_001183476.1 2238496 R 319224 CDS YP_001183477.1 146293053 5078403 complement(2240918..2241397) 1 NC_009438.1 KEGG: son:SO2360 hypothetical protein; hypothetical protein 2241397 5078403 Sputcn32_1955 Shewanella putrefaciens CN-32 hypothetical protein YP_001183477.1 2240918 R 319224 CDS YP_001183478.1 146293054 5078404 complement(2241506..2242474) 1 NC_009438.1 TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; PFAM: cytochrome c, class I; KEGG: shm:Shewmr7_1966 cytochrome c oxidase, cbb3-type, subunit III; cytochrome c oxidase, cbb3-type subunit III 2242474 5078404 Sputcn32_1956 Shewanella putrefaciens CN-32 cytochrome c oxidase, cbb3-type subunit III YP_001183478.1 2241506 R 319224 CDS YP_001183479.1 146293055 5078405 complement(2242474..2242650) 1 NC_009438.1 PFAM: Cbb3-type cytochrome oxidase component; KEGG: shm:Shewmr7_1967 Cbb3-type cytochrome oxidase component; cbb3-type cytochrome oxidase subunit 2242650 5078405 Sputcn32_1957 Shewanella putrefaciens CN-32 cbb3-type cytochrome oxidase subunit YP_001183479.1 2242474 R 319224 CDS YP_001183480.1 146293056 5078406 complement(2242662..2243288) 1 NC_009438.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 2243288 5078406 Sputcn32_1958 Shewanella putrefaciens CN-32 cbb3-type cytochrome c oxidase subunit II YP_001183480.1 2242662 R 319224 CDS YP_001183481.1 146293057 5078407 complement(2243301..2244737) 1 NC_009438.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 2244737 5078407 Sputcn32_1959 Shewanella putrefaciens CN-32 cbb3-type cytochrome c oxidase subunit I YP_001183481.1 2243301 R 319224 CDS YP_001183482.1 146293058 5078408 2244994..2245449 1 NC_009438.1 KEGG: son:SO2365 hypothetical protein; hypothetical protein 2245449 5078408 Sputcn32_1960 Shewanella putrefaciens CN-32 hypothetical protein YP_001183482.1 2244994 D 319224 CDS YP_001183483.1 146293059 5078410 complement(2245675..2248464) 1 NC_009438.1 PFAM: transposase Tn3 family protein; KEGG: sfr:Sfri_3470 transposase Tn3 family protein; transposase Tn3 family protein 2248464 5078410 Sputcn32_1962 Shewanella putrefaciens CN-32 transposase Tn3 family protein YP_001183483.1 2245675 R 319224 CDS YP_001183484.1 146293060 5078411 2248484..2248768 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vpa:VP1788 putative transposase; transposase IS3/IS911 family protein 2248768 5078411 Sputcn32_1963 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001183484.1 2248484 D 319224 CDS YP_001183485.1 146293061 5078412 2248819..2249634 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vpa:VP1787 putative transposase; integrase catalytic subunit 2249634 5078412 Sputcn32_1964 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001183485.1 2248819 D 319224 CDS YP_001183486.1 146293062 5078413 complement(2249791..2250759) 1 NC_009438.1 PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2614 putative efflux protein; bile acid:sodium symporter 2250759 5078413 Sputcn32_1965 Shewanella putrefaciens CN-32 bile acid:sodium symporter YP_001183486.1 2249791 R 319224 CDS YP_001183487.1 146293063 5078414 complement(2250873..2252921) 1 NC_009438.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: chu:CHU_1510 cation-transporting ATPase; possible zinc-transporting ATPase; heavy metal translocating P-type ATPase 2252921 5078414 Sputcn32_1966 Shewanella putrefaciens CN-32 heavy metal translocating P-type ATPase YP_001183487.1 2250873 R 319224 CDS YP_001183488.1 146293064 5078415 complement(2252978..2253484) 1 NC_009438.1 hypothetical protein 2253484 5078415 Sputcn32_1967 Shewanella putrefaciens CN-32 hypothetical protein YP_001183488.1 2252978 R 319224 CDS YP_001183489.1 146293065 5078416 complement(2253506..2256628) 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: sde:Sde_1955 cation efflux system protein; CzcA family heavy metal efflux protein 2256628 5078416 Sputcn32_1968 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001183489.1 2253506 R 319224 CDS YP_001183490.1 146293066 5078417 complement(2256638..2257657) 1 NC_009438.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: sde:Sde_1956 hypothetical protein; biotin/lipoyl attachment domain-containing protein 2257657 5078417 Sputcn32_1969 Shewanella putrefaciens CN-32 biotin/lipoyl attachment domain-containing protein YP_001183490.1 2256638 R 319224 CDS YP_001183491.1 146293067 5078418 complement(2257736..2258980) 1 NC_009438.1 PFAM: outer membrane efflux protein; KEGG: sde:Sde_1958 aconitate hydratase 1; outer membrane efflux protein 2258980 5078418 Sputcn32_1970 Shewanella putrefaciens CN-32 outer membrane efflux protein YP_001183491.1 2257736 R 319224 CDS YP_001183492.1 146293068 5078419 complement(2259032..2259397) 1 NC_009438.1 hypothetical protein 2259397 5078419 Sputcn32_1971 Shewanella putrefaciens CN-32 hypothetical protein YP_001183492.1 2259032 R 319224 CDS YP_001183493.1 146293069 5078420 complement(2259451..2260356) 1 NC_009438.1 KEGG: abo:ABO_1368 cation efflux system permease, putative; cation efflux system permease 2260356 5078420 Sputcn32_1972 Shewanella putrefaciens CN-32 cation efflux system permease YP_001183493.1 2259451 R 319224 CDS YP_001183494.1 146293070 5078421 2260379..2260843 1 NC_009438.1 TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: sde:Sde_1961 putative transcriptional regulator, MerR family; MerR family transcriptional regulator 2260843 5078421 Sputcn32_1973 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001183494.1 2260379 D 319224 CDS YP_001183495.1 146293071 5078422 2260875..2261783 1 NC_009438.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: tcx:Tcr_1429 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2261783 5078422 Sputcn32_1974 Shewanella putrefaciens CN-32 cation diffusion facilitator family transporter YP_001183495.1 2260875 D 319224 CDS YP_001183496.1 146293072 5078423 2261785..2262111 1 NC_009438.1 PFAM: protein of unknown function UPF0060; KEGG: abo:ABO_1373 hypothetical protein; hypothetical protein 2262111 5078423 Sputcn32_1975 Shewanella putrefaciens CN-32 hypothetical protein YP_001183496.1 2261785 D 319224 CDS YP_001183497.1 146293073 5078425 2262587..2262940 1 NC_009438.1 hypothetical protein 2262940 5078425 Sputcn32_1977 Shewanella putrefaciens CN-32 hypothetical protein YP_001183497.1 2262587 D 319224 CDS YP_001183498.1 146293074 5078426 complement(2263084..2264721) 1 NC_009438.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: ilo:IL1649 membrane hydrolase of alkaline phosphatase superfamily; sulfatase 2264721 5078426 Sputcn32_1978 Shewanella putrefaciens CN-32 sulfatase YP_001183498.1 2263084 R 319224 CDS YP_001183499.1 146293075 5078427 complement(2265107..2267098) 1 NC_009438.1 PFAM: sulfatase; KEGG: mfa:Mfla_1399 sulfatase; sulfatase 2267098 5078427 Sputcn32_1979 Shewanella putrefaciens CN-32 sulfatase YP_001183499.1 2265107 R 319224 CDS YP_001183500.1 146293076 5078428 2267201..2267557 1 NC_009438.1 PFAM: diacylglycerol kinase; KEGG: sdy:SDY_4532 diacylglycerol kinase; diacylglycerol kinase 2267557 5078428 Sputcn32_1980 Shewanella putrefaciens CN-32 diacylglycerol kinase YP_001183500.1 2267201 D 319224 CDS YP_001183501.1 146293077 5078429 2267575..2268243 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ilo:IL1648 response regulator (CheY, wHTH domains); two component transcriptional regulator 2268243 5078429 Sputcn32_1981 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001183501.1 2267575 D 319224 CDS YP_001183502.1 146293078 5078430 2268233..2269627 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: ilo:IL1647 signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2269627 5078430 Sputcn32_1982 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001183502.1 2268233 D 319224 CDS YP_001183503.1 146293079 5078431 complement(2269845..2270813) 1 NC_009438.1 PFAM: Bile acid:sodium symporter; KEGG: dar:Daro_2614 putative efflux protein; bile acid:sodium symporter 2270813 5078431 Sputcn32_1983 Shewanella putrefaciens CN-32 bile acid:sodium symporter YP_001183503.1 2269845 R 319224 CDS YP_001183504.1 146293080 5078432 complement(2271082..2272257) 1 NC_009438.1 KEGG: psp:PSPPH_2263 cointegrate resolution protein T; cointegrate resolution protein T 2272257 5078432 Sputcn32_1984 Shewanella putrefaciens CN-32 cointegrate resolution protein T YP_001183504.1 2271082 R 319224 CDS YP_001183505.1 146293081 5078433 2272473..2272802 1 NC_009438.1 KEGG: vch:VCA0486 hypothetical protein; hypothetical protein 2272802 5078433 Sputcn32_1985 Shewanella putrefaciens CN-32 hypothetical protein YP_001183505.1 2272473 D 319224 CDS YP_001183506.1 146293082 5078188 2272803..2273318 1 NC_009438.1 KEGG: vch:VCA0487 hypothetical protein; hypothetical protein 2273318 5078188 Sputcn32_1986 Shewanella putrefaciens CN-32 hypothetical protein YP_001183506.1 2272803 D 319224 CDS YP_001183507.1 146293083 5078189 2273343..2274302 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: pfo:Pfl_2926 phage integrase; phage integrase family protein 2274302 5078189 Sputcn32_1987 Shewanella putrefaciens CN-32 phage integrase family protein YP_001183507.1 2273343 D 319224 CDS YP_001183508.1 146293084 5078190 complement(2274417..2275730) 1 NC_009438.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: shm:Shewmr7_1971 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 2275730 5078190 Sputcn32_1988 Shewanella putrefaciens CN-32 response regulator receiver modulated metal dependent phosphohydrolase YP_001183508.1 2274417 R 319224 CDS YP_001183509.1 146293085 5078191 complement(2275768..2278848) 1 NC_009438.1 PFAM: transposase Tn3 family protein; KEGG: sfr:Sfri_3470 transposase Tn3 family protein; transposase Tn3 family protein 2278848 5078191 Sputcn32_1989 Shewanella putrefaciens CN-32 transposase Tn3 family protein YP_001183509.1 2275768 R 319224 CDS YP_001183510.1 146293086 5078192 complement(2278872..2279183) 1 NC_009438.1 PFAM: plasmid stabilization system; KEGG: sfr:Sfri_3471 plasmid stabilization system; plasmid stabilization system protein 2279183 5078192 Sputcn32_1990 Shewanella putrefaciens CN-32 plasmid stabilization system protein YP_001183510.1 2278872 R 319224 CDS YP_001183511.1 146293087 5078193 complement(2279183..2279443) 1 NC_009438.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: sfr:Sfri_3472 prevent-host-death family protein; prevent-host-death family protein 2279443 5078193 Sputcn32_1991 Shewanella putrefaciens CN-32 prevent-host-death family protein YP_001183511.1 2279183 R 319224 CDS YP_001183512.1 146293088 5078194 2279613..2280233 1 NC_009438.1 PFAM: Resolvase, N-terminal domain; KEGG: sfr:Sfri_3477 resolvase, N-terminal domain protein; resolvase domain-containing protein 2280233 5078194 Sputcn32_1992 Shewanella putrefaciens CN-32 resolvase domain-containing protein YP_001183512.1 2279613 D 319224 CDS YP_001183513.1 146293089 5078195 complement(2280351..2280683) 1 NC_009438.1 KEGG: sil:SPO2248 DnaK suppressor protein, putative; TraR/DksA family transcriptional regulator 2280683 5078195 Sputcn32_1993 Shewanella putrefaciens CN-32 TraR/DksA family transcriptional regulator YP_001183513.1 2280351 R 319224 CDS YP_001183514.1 146293090 5078196 complement(2280774..2281628) 1 NC_009438.1 PFAM: UspA domain protein; KEGG: sfr:Sfri_0791 UspA domain protein; UspA domain-containing protein 2281628 5078196 Sputcn32_1994 Shewanella putrefaciens CN-32 UspA domain-containing protein YP_001183514.1 2280774 R 319224 CDS YP_001183515.1 146293091 5078197 complement(2281663..2283153) 1 NC_009438.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: sfr:Sfri_0790 sulphate transporter; sulfate transporter 2283153 5078197 Sputcn32_1995 Shewanella putrefaciens CN-32 sulfate transporter YP_001183515.1 2281663 R 319224 CDS YP_001183516.1 146293092 5078198 complement(2283645..2283881) 1 NC_009438.1 KEGG: shm:Shewmr7_1971 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver protein 2283881 5078198 Sputcn32_1996 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001183516.1 2283645 R 319224 CDS YP_001183517.1 146293093 5078199 2284054..2284284 1 NC_009438.1 KEGG: shm:Shewmr7_1972 hypothetical protein; hypothetical protein 2284284 5078199 Sputcn32_1997 Shewanella putrefaciens CN-32 hypothetical protein YP_001183517.1 2284054 D 319224 CDS YP_001183518.1 146293094 5078200 complement(2284546..2284731) 1 NC_009438.1 hypothetical protein 2284731 5078200 Sputcn32_1998 Shewanella putrefaciens CN-32 hypothetical protein YP_001183518.1 2284546 R 319224 CDS YP_001183519.1 146293095 5078202 complement(2285128..2286402) 1 NC_009438.1 uncharacterized member of the major facilitator superfamily (MFS); inner membrane transport protein YdhC 2286402 5078202 Sputcn32_1999 Shewanella putrefaciens CN-32 inner membrane transport protein YdhC YP_001183519.1 2285128 R 319224 CDS YP_001183520.1 146293096 5078203 2286431..2287420 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: she:Shewmr4_1974 transcriptional regulator, LysR family; putative DNA-binding transcriptional regulator 2287420 5078203 Sputcn32_2000 Shewanella putrefaciens CN-32 putative DNA-binding transcriptional regulator YP_001183520.1 2286431 D 319224 CDS YP_001183521.1 146293097 5078204 2287659..2288318 1 NC_009438.1 PFAM: protein of unknown function UPF0005; KEGG: son:SO2375 membrane protein, putative; hypothetical protein 2288318 5078204 Sputcn32_2001 Shewanella putrefaciens CN-32 hypothetical protein YP_001183521.1 2287659 D 319224 CDS YP_001183522.1 146293098 5078205 2288379..2288768 1 NC_009438.1 PFAM: DsrE family protein; KEGG: shm:Shewmr7_2004 DsrE family protein; DsrE family protein 2288768 5078205 Sputcn32_2002 Shewanella putrefaciens CN-32 DsrE family protein YP_001183522.1 2288379 D 319224 CDS YP_001183523.1 146293099 5078206 2288783..2289139 1 NC_009438.1 PFAM: DsrE family protein; KEGG: shm:Shewmr7_2005 DsrE family protein; DsrE family protein 2289139 5078206 Sputcn32_2003 Shewanella putrefaciens CN-32 DsrE family protein YP_001183523.1 2288783 D 319224 CDS YP_001183524.1 146293100 5078207 2289139..2289420 1 NC_009438.1 PFAM: DsrH family protein; KEGG: son:SO2378 putative uncharacterized protein involved in oxidation of intracellular sulfur; DsrH family protein 2289420 5078207 Sputcn32_2004 Shewanella putrefaciens CN-32 DsrH family protein YP_001183524.1 2289139 D 319224 CDS YP_001183525.1 146293101 5078208 2289414..2289752 1 NC_009438.1 PFAM: DsrC family protein; KEGG: she:Shewmr4_1969 DsrC family protein; DsrC family protein 2289752 5078208 Sputcn32_2005 Shewanella putrefaciens CN-32 DsrC family protein YP_001183525.1 2289414 D 319224 CDS YP_001183526.1 146293102 5078209 complement(2289858..2289980) 1 NC_009438.1 KEGG: shm:Shewmr7_2008 hypothetical protein; hypothetical protein 2289980 5078209 Sputcn32_2006 Shewanella putrefaciens CN-32 hypothetical protein YP_001183526.1 2289858 R 319224 CDS YP_001183527.1 146293103 5078210 complement(2289998..2291284) 1 NC_009438.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2291284 5078210 Sputcn32_2007 Shewanella putrefaciens CN-32 seryl-tRNA synthetase YP_001183527.1 2289998 R 319224 CDS YP_001183528.1 146293104 5078211 complement(2291303..2291677) 1 NC_009438.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 2291677 5078211 Sputcn32_2008 Shewanella putrefaciens CN-32 camphor resistance protein CrcB YP_001183528.1 2291303 R 319224 CDS YP_001183529.1 146293105 5078212 complement(2291670..2293001) 1 NC_009438.1 PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; KEGG: son:SO2308 ATPase, AAA family; recombination factor protein RarA 2293001 5078212 Sputcn32_2009 Shewanella putrefaciens CN-32 recombination factor protein RarA YP_001183529.1 2291670 R 319224 CDS YP_001183530.1 146293106 5078213 complement(2293010..2293636) 1 NC_009438.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: shm:Shewmr7_2012 outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA 2293636 5078213 Sputcn32_2010 Shewanella putrefaciens CN-32 outer membrane lipoprotein carrier protein LolA YP_001183530.1 2293010 R 319224 CDS YP_001183531.1 146293107 5078214 complement(2293713..2296403) 1 NC_009438.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: shm:Shewmr7_2013 cell divisionFtsK/SpoIIIE; cell division protein FtsK 2296403 5078214 Sputcn32_2011 Shewanella putrefaciens CN-32 cell division protein FtsK YP_001183531.1 2293713 R 319224 CDS YP_001183532.1 146293108 5078215 complement(2296733..2297239) 1 NC_009438.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 2297239 5078215 Sputcn32_2012 Shewanella putrefaciens CN-32 leucine-responsive transcriptional regulator YP_001183532.1 2296733 R 319224 CDS YP_001183533.1 146293109 5078216 2297419..2298534 1 NC_009438.1 TIGRFAM: alanine dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Shikimate/quinate 5-dehydrogenase; alanine dehydrogenase/PNT domain protein; KEGG: shm:Shewmr7_2015 alanine dehydrogenase; alanine dehydrogenase 2298534 5078216 Sputcn32_2013 Shewanella putrefaciens CN-32 alanine dehydrogenase YP_001183533.1 2297419 D 319224 CDS YP_001183534.1 146293110 5078217 2298788..2299741 1 NC_009438.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO2303 thioredoxin reductase; thioredoxin reductase 2299741 5078217 Sputcn32_2014 Shewanella putrefaciens CN-32 thioredoxin reductase YP_001183534.1 2298788 D 319224 CDS YP_001183535.1 146293111 5078218 complement(2299991..2300347) 1 NC_009438.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2300347 rplT 5078218 rplT Shewanella putrefaciens CN-32 50S ribosomal protein L20 YP_001183535.1 2299991 R 319224 CDS YP_001183536.1 146293112 5078219 complement(2300364..2300558) 1 NC_009438.1 PFAM: ribosomal protein L35; KEGG: sfr:Sfri_2026 ribosomal protein L35; 50S ribosomal protein L35 2300558 rpmI 5078219 rpmI Shewanella putrefaciens CN-32 50S ribosomal protein L35 YP_001183536.1 2300364 R 319224 CDS YP_001183537.1 146293113 5078220 complement(2300642..2301073) 1 NC_009438.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2301073 infC 5078220 infC Shewanella putrefaciens CN-32 translation initiation factor IF-3 YP_001183537.1 2300642 R 319224 CDS YP_001183538.1 146293114 5078221 complement(2301188..2303116) 1 NC_009438.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2303116 5078221 Sputcn32_2018 Shewanella putrefaciens CN-32 threonyl-tRNA synthetase YP_001183538.1 2301188 R 319224 CDS YP_001183539.1 146293115 5078222 2303517..2303717 1 NC_009438.1 KEGG: shm:Shewmr7_2023 hypothetical protein; hypothetical protein 2303717 5078222 Sputcn32_2019 Shewanella putrefaciens CN-32 hypothetical protein YP_001183539.1 2303517 D 319224 CDS YP_001183540.1 146293116 5078223 complement(2303714..2304343) 1 NC_009438.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2304343 5078223 Sputcn32_2020 Shewanella putrefaciens CN-32 riboflavin synthase subunit alpha YP_001183540.1 2303714 R 319224 CDS YP_001183541.1 146293117 5078224 2304378..2305757 1 NC_009438.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: shm:Shewmr7_2025 MATE efflux family protein; MATE efflux family protein 2305757 5078224 Sputcn32_2021 Shewanella putrefaciens CN-32 MATE efflux family protein YP_001183541.1 2304378 D 319224 CDS YP_001183542.1 146293118 5078225 2305757..2306008 1 NC_009438.1 hypothetical protein 2306008 5078225 Sputcn32_2022 Shewanella putrefaciens CN-32 hypothetical protein YP_001183542.1 2305757 D 319224 CDS YP_001183543.1 146293119 5078228 2306746..2307297 1 NC_009438.1 serine protease inhibitor, inhibits trypsin and other proteases; ecotin 2307297 5078228 Sputcn32_2023 Shewanella putrefaciens CN-32 ecotin YP_001183543.1 2306746 D 319224 CDS YP_001183544.1 146293120 5078229 complement(2307378..2307653) 1 NC_009438.1 KEGG: vfi:VF0709 hypothetical protein; hypothetical protein 2307653 5078229 Sputcn32_2024 Shewanella putrefaciens CN-32 hypothetical protein YP_001183544.1 2307378 R 319224 CDS YP_001183545.1 146293121 5078230 complement(2307672..2309651) 1 NC_009438.1 KEGG: shm:Shewmr7_2030 ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; ATP-dependent DNA helicase RecQ 2309651 5078230 Sputcn32_2025 Shewanella putrefaciens CN-32 ATP-dependent DNA helicase RecQ YP_001183545.1 2307672 R 319224 CDS YP_001183546.1 146293122 5078231 complement(2309863..2310186) 1 NC_009438.1 KEGG: she:Shewmr4_1945 hypothetical protein; hypothetical protein 2310186 5078231 Sputcn32_2026 Shewanella putrefaciens CN-32 hypothetical protein YP_001183546.1 2309863 R 319224 CDS YP_001183547.1 146293123 5078232 2310441..2312498 1 NC_009438.1 PFAM: protein of unknown function DUF839; KEGG: shm:Shewmr7_2034 twin-arginine translocation pathway signal; hypothetical protein 2312498 5078232 Sputcn32_2027 Shewanella putrefaciens CN-32 hypothetical protein YP_001183547.1 2310441 D 319224 CDS YP_001183548.1 146293124 5078233 complement(2312593..2313363) 1 NC_009438.1 PFAM: DTW domain containing protein; KEGG: son:SO2387 conserved hypothetical protein; DTW domain-containing protein 2313363 5078233 Sputcn32_2028 Shewanella putrefaciens CN-32 DTW domain-containing protein YP_001183548.1 2312593 R 319224 CDS YP_001183549.1 146293125 5078234 2313524..2314708 1 NC_009438.1 PFAM: beta-lactamase; KEGG: shm:Shewmr7_2039 beta-lactamase; beta-lactamase 2314708 ampC 5078234 ampC Shewanella putrefaciens CN-32 beta-lactamase YP_001183549.1 2313524 D 319224 CDS YP_001183550.1 146293126 5079456 2315052..2316320 1 NC_009438.1 multidrug efflux protein involved in adaptation to low energy shock; multidrug resistance protein D 2316320 emrD 5079456 emrD Shewanella putrefaciens CN-32 multidrug resistance protein D YP_001183550.1 2315052 D 319224 CDS YP_001183551.1 146293127 5079457 complement(2316377..2317690) 1 NC_009438.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 2317690 pssA 5079457 pssA Shewanella putrefaciens CN-32 phosphatidylserine synthase YP_001183551.1 2316377 R 319224 CDS YP_001183552.1 146293128 5079458 complement(2317702..2318034) 1 NC_009438.1 KEGG: shm:Shewmr7_2042 hypothetical protein; hypothetical protein 2318034 5079458 Sputcn32_2032 Shewanella putrefaciens CN-32 hypothetical protein YP_001183552.1 2317702 R 319224 CDS YP_001183553.1 146293129 5079459 2318334..2318510 1 NC_009438.1 KEGG: shm:Shewmr7_2043 hypothetical protein; hypothetical protein 2318510 5079459 Sputcn32_2033 Shewanella putrefaciens CN-32 hypothetical protein YP_001183553.1 2318334 D 319224 CDS YP_001183554.1 146293130 5079460 2318536..2320050 1 NC_009438.1 KEGG: shm:Shewmr7_2044 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13, D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2320050 5079460 Sputcn32_2034 Shewanella putrefaciens CN-32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_001183554.1 2318536 D 319224 CDS YP_001183555.1 146293131 5079461 complement(2320116..2321873) 1 NC_009438.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: she:Shewmr4_1931 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 2321873 5079461 Sputcn32_2035 Shewanella putrefaciens CN-32 acyl-CoA dehydrogenase domain-containing protein YP_001183555.1 2320116 R 319224 CDS YP_001183556.1 146293132 5079462 complement(2322088..2322630) 1 NC_009438.1 KEGG: she:Shewmr4_1930 hypothetical protein; hypothetical protein 2322630 5079462 Sputcn32_2036 Shewanella putrefaciens CN-32 hypothetical protein YP_001183556.1 2322088 R 319224 CDS YP_001183557.1 146293133 5079463 complement(2322701..2323522) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: shm:Shewmr7_2049 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2323522 5079463 Sputcn32_2037 Shewanella putrefaciens CN-32 short chain dehydrogenase YP_001183557.1 2322701 R 319224 CDS YP_001183558.1 146293134 5079464 complement(2323574..2324269) 1 NC_009438.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2324269 5079464 Sputcn32_2038 Shewanella putrefaciens CN-32 orotidine 5'-phosphate decarboxylase YP_001183558.1 2323574 R 319224 CDS YP_001183559.1 146293135 5079465 complement(2324315..2325475) 1 NC_009438.1 KEGG: son:SO2399 hypothetical protein; hypothetical protein 2325475 5079465 Sputcn32_2039 Shewanella putrefaciens CN-32 hypothetical protein YP_001183559.1 2324315 R 319224 CDS YP_001183560.1 146293136 5079466 complement(2325477..2325752) 1 NC_009438.1 PFAM: protein of unknown function DUF1049; KEGG: shm:Shewmr7_2052 protein of unknown function DUF1049; hypothetical protein 2325752 5079466 Sputcn32_2040 Shewanella putrefaciens CN-32 hypothetical protein YP_001183560.1 2325477 R 319224 CDS YP_001183561.1 146293137 5079467 complement(2325875..2326162) 1 NC_009438.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2326162 ihfB 5079467 ihfB Shewanella putrefaciens CN-32 integration host factor subunit beta YP_001183561.1 2325875 R 319224 CDS YP_001183562.1 146293138 5079468 complement(2326238..2327905) 1 NC_009438.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2327905 rpsA 5079468 rpsA Shewanella putrefaciens CN-32 30S ribosomal protein S1 YP_001183562.1 2326238 R 319224 CDS YP_001183563.1 146293139 5079469 complement(2328009..2328701) 1 NC_009438.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2328701 cmk 5079469 cmk Shewanella putrefaciens CN-32 cytidylate kinase YP_001183563.1 2328009 R 319224 CDS YP_001183564.1 146293140 5079470 complement(2328887..2330167) 1 NC_009438.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2330167 5079470 Sputcn32_2044 Shewanella putrefaciens CN-32 3-phosphoshikimate 1-carboxyvinyltransferase YP_001183564.1 2328887 R 319224 CDS YP_001183565.1 146293141 5079471 2330603..2331793 1 NC_009438.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2331793 5079471 Sputcn32_2045 Shewanella putrefaciens CN-32 aromatic amino acid aminotransferase YP_001183565.1 2330603 D 319224 CDS YP_001183566.1 146293142 5079472 complement(2331841..2332749) 1 NC_009438.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: shm:Shewmr7_1974 SMP-30/gluconolaconase/LRE domain protein; SMP-30/gluconolaconase/LRE domain-containing protein 2332749 5079472 Sputcn32_2046 Shewanella putrefaciens CN-32 SMP-30/gluconolaconase/LRE domain-containing protein YP_001183566.1 2331841 R 319224 CDS YP_001183567.1 146293143 5079473 complement(2332911..2336249) 1 NC_009438.1 PFAM: glycoside hydrolase, family 43; KEGG: she:Shewmr4_1999 glycoside hydrolase, family 43; glycoside hydrolase 2336249 5079473 Sputcn32_2047 Shewanella putrefaciens CN-32 glycoside hydrolase YP_001183567.1 2332911 R 319224 CDS YP_001183568.1 146293144 5079474 2336822..2339656 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_1977 TonB-dependent receptor; TonB-dependent receptor 2339656 5079474 Sputcn32_2048 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183568.1 2336822 D 319224 CDS YP_001183569.1 146293145 5079475 2339911..2340675 1 NC_009438.1 PFAM: protein of unknown function DUF81; KEGG: she:Shewmr4_1997 protein of unknown function DUF81; hypothetical protein 2340675 5079475 Sputcn32_2049 Shewanella putrefaciens CN-32 hypothetical protein YP_001183569.1 2339911 D 319224 CDS YP_001183570.1 146293146 5079476 complement(2340898..2342784) 1 NC_009438.1 PFAM: glycoside hydrolase, family 43; KEGG: she:Shewmr4_1996 glycoside hydrolase, family 43; alpha-N-arabinofuranosidase 2342784 5079476 Sputcn32_2050 Shewanella putrefaciens CN-32 alpha-N-arabinofuranosidase YP_001183570.1 2340898 R 319224 CDS YP_001183571.1 146293147 5079477 complement(2342787..2343860) 1 NC_009438.1 PFAM: glycoside hydrolase, family 43; KEGG: shm:Shewmr7_1980 arabinan endo-1,5-alpha-L-arabinosidase; arabinan endo-1,5-alpha-L-arabinosidase 2343860 5079477 Sputcn32_2051 Shewanella putrefaciens CN-32 arabinan endo-1,5-alpha-L-arabinosidase YP_001183571.1 2342787 R 319224 CDS YP_001183572.1 146293148 5079478 2344074..2345489 1 NC_009438.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_1994 sugar (glycoside-pentoside-hexuronide) transporter; sugar (glycoside-Pentoside-hexuronide) transporter 2345489 5079478 Sputcn32_2052 Shewanella putrefaciens CN-32 sugar (glycoside-Pentoside-hexuronide) transporter YP_001183572.1 2344074 D 319224 CDS YP_001183573.1 146293149 5079479 2345517..2346464 1 NC_009438.1 PFAM: glycoside hydrolase, family 43; KEGG: sde:Sde_0777 ribosomal protein L11 methyltransferase; alpha-N-arabinofuranosidase 2346464 5079479 Sputcn32_2053 Shewanella putrefaciens CN-32 alpha-N-arabinofuranosidase YP_001183573.1 2345517 D 319224 CDS YP_001183574.1 146293150 5079480 complement(2346523..2348142) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: pfl:PFL_1735 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2348142 5079480 Sputcn32_2054 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183574.1 2346523 R 319224 CDS YP_001183575.1 146293151 5079481 complement(2348364..2349473) 1 NC_009438.1 PFAM: glycoside hydrolase, family 43; KEGG: shm:Shewmr7_1984 alpha-N-arabinofuranosidase; alpha-N-arabinofuranosidase 2349473 5079481 Sputcn32_2055 Shewanella putrefaciens CN-32 alpha-N-arabinofuranosidase YP_001183575.1 2348364 R 319224 CDS YP_001183576.1 146293152 5079482 complement(2349448..2350410) 1 NC_009438.1 membrane component of a putative sugar ABC transporter system; inner membrane ABC transporter permease YjfF 2350410 5079482 Sputcn32_2056 Shewanella putrefaciens CN-32 inner membrane ABC transporter permease YjfF YP_001183576.1 2349448 R 319224 CDS YP_001183577.1 146293153 5079483 complement(2350407..2351525) 1 NC_009438.1 PFAM: inner-membrane translocator; KEGG: shm:Shewmr7_1986 inner-membrane translocator; inner-membrane translocator 2351525 5079483 Sputcn32_2057 Shewanella putrefaciens CN-32 inner-membrane translocator YP_001183577.1 2350407 R 319224 CDS YP_001183578.1 146293154 5079484 complement(2351526..2353025) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_1987 ABC transporter related; ABC transporter-like protein 2353025 5079484 Sputcn32_2058 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001183578.1 2351526 R 319224 CDS YP_001183579.1 146293155 5079485 complement(2353059..2354000) 1 NC_009438.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: shm:Shewmr7_1988 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 2354000 5079485 Sputcn32_2059 Shewanella putrefaciens CN-32 periplasmic binding protein/LacI transcriptional regulator YP_001183579.1 2353059 R 319224 CDS YP_001183580.1 146293156 5079486 complement(2354124..2355179) 1 NC_009438.1 PFAM: Aldose 1-epimerase; KEGG: shm:Shewmr7_1989 aldose 1-epimerase; aldose 1-epimerase 2355179 5079486 Sputcn32_2060 Shewanella putrefaciens CN-32 aldose 1-epimerase YP_001183580.1 2354124 R 319224 CDS YP_001183581.1 146293157 5079487 complement(2355282..2356052) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: she:Shewmr4_1984 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 2356052 5079487 Sputcn32_2061 Shewanella putrefaciens CN-32 short-chain dehydrogenase/reductase SDR YP_001183581.1 2355282 R 319224 CDS YP_001183582.1 146293158 5079488 complement(2356112..2357845) 1 NC_009438.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2357845 5079488 Sputcn32_2062 Shewanella putrefaciens CN-32 dihydroxy-acid dehydratase YP_001183582.1 2356112 R 319224 CDS YP_001183583.1 146293159 5079489 2358050..2358985 1 NC_009438.1 PFAM: glycoside hydrolase, family 43; KEGG: she:Shewmr4_1982 glycoside hydrolase, family 43; glycoside hydrolase 2358985 5079489 Sputcn32_2063 Shewanella putrefaciens CN-32 glycoside hydrolase YP_001183583.1 2358050 D 319224 CDS YP_001183584.1 146293160 5079490 complement(2359059..2359775) 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: shm:Shewmr7_1993 GntR domain protein; GntR family transcriptional regulator 2359775 5079490 Sputcn32_2064 Shewanella putrefaciens CN-32 GntR family transcriptional regulator YP_001183584.1 2359059 R 319224 CDS YP_001183585.1 146293161 5079491 complement(2359979..2360584) 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: shm:Shewmr7_1994 HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase family hydrolase 2360584 5079491 Sputcn32_2065 Shewanella putrefaciens CN-32 beta-phosphoglucomutase family hydrolase YP_001183585.1 2359979 R 319224 CDS YP_001183586.1 146293162 5079492 complement(2360692..2362209) 1 NC_009438.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2362209 5079492 Sputcn32_2066 Shewanella putrefaciens CN-32 L-arabinose isomerase YP_001183586.1 2360692 R 319224 CDS YP_001183587.1 146293163 5079493 complement(2362240..2362935) 1 NC_009438.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2362935 araD 5079493 araD Shewanella putrefaciens CN-32 L-ribulose-5-phosphate 4-epimerase YP_001183587.1 2362240 R 319224 CDS YP_001183588.1 146293164 5079494 complement(2362937..2364610) 1 NC_009438.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2364610 5079494 Sputcn32_2068 Shewanella putrefaciens CN-32 ribulokinase YP_001183588.1 2362937 R 319224 CDS YP_001183589.1 146293165 5079495 complement(2364950..2366041) 1 NC_009438.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2366041 5079495 Sputcn32_2069 Shewanella putrefaciens CN-32 phosphoserine aminotransferase YP_001183589.1 2364950 R 319224 CDS YP_001183590.1 146293166 5079496 complement(2366144..2368897) 1 NC_009438.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal repeat, beta-propeller; KEGG: she:Shewmr4_1919 DNA gyrase, A subunit; DNA gyrase subunit A 2368897 5079496 Sputcn32_2070 Shewanella putrefaciens CN-32 DNA gyrase subunit A YP_001183590.1 2366144 R 319224 CDS YP_001183591.1 146293167 5079497 2369282..2369992 1 NC_009438.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 2369992 5079497 Sputcn32_2071 Shewanella putrefaciens CN-32 3-demethylubiquinone-9 3-methyltransferase YP_001183591.1 2369282 D 319224 CDS YP_001183592.1 146293168 5079498 2369994..2370662 1 NC_009438.1 KEGG: shm:Shewmr7_2061 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD family hydrolase 2370662 5079498 Sputcn32_2072 Shewanella putrefaciens CN-32 HAD family hydrolase YP_001183592.1 2369994 D 319224 CDS YP_001183593.1 146293169 5079499 2371056..2373344 1 NC_009438.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2373344 5079499 Sputcn32_2073 Shewanella putrefaciens CN-32 ribonucleotide-diphosphate reductase subunit alpha YP_001183593.1 2371056 D 319224 CDS YP_001183594.1 146293170 5079500 2373409..2374539 1 NC_009438.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 2374539 nrdB 5079500 nrdB Shewanella putrefaciens CN-32 ribonucleotide-diphosphate reductase subunit beta YP_001183594.1 2373409 D 319224 CDS YP_001183595.1 146293171 5079501 2374551..2375006 1 NC_009438.1 PFAM: ferredoxin; KEGG: shm:Shewmr7_2064 ferredoxin; ferredoxin 2375006 5079501 Sputcn32_2075 Shewanella putrefaciens CN-32 ferredoxin YP_001183595.1 2374551 D 319224 CDS YP_001183596.1 146293172 5079502 complement(2375038..2375520) 1 NC_009438.1 KEGG: hne:HNE_0837 YCII domain protein; YCII domain-containing protein 2375520 5079502 Sputcn32_2076 Shewanella putrefaciens CN-32 YCII domain-containing protein YP_001183596.1 2375038 R 319224 CDS YP_001183597.1 146293173 5079503 complement(2375681..2377699) 1 NC_009438.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: she:Shewmr4_1910 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2377699 5079503 Sputcn32_2077 Shewanella putrefaciens CN-32 NADH:flavin oxidoreductase YP_001183597.1 2375681 R 319224 CDS YP_001183598.1 146293174 5079504 2377865..2379712 1 NC_009438.1 TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: she:Shewmr4_1909 signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 67K type 2379712 5079504 Sputcn32_2078 Shewanella putrefaciens CN-32 signal peptide peptidase SppA, 67K type YP_001183598.1 2377865 D 319224 CDS YP_001183599.1 146293175 5079505 2379852..2380865 1 NC_009438.1 converts asparagine to aspartate and ammonia; asparaginase 2380865 ansA 5079505 ansA Shewanella putrefaciens CN-32 asparaginase YP_001183599.1 2379852 D 319224 CDS YP_001183600.1 146293176 5078285 complement(2381039..2383222) 1 NC_009438.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2383222 5078285 Sputcn32_2080 Shewanella putrefaciens CN-32 glucosyltransferase MdoH YP_001183600.1 2381039 R 319224 CDS YP_001183601.1 146293177 5078286 complement(2383246..2384880) 1 NC_009438.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2384880 mdoG 5078286 mdoG Shewanella putrefaciens CN-32 glucan biosynthesis protein G YP_001183601.1 2383246 R 319224 CDS YP_001183602.1 146293178 5078287 complement(2385329..2386723) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2105 sensor protein YgiY, putative; integral membrane sensor signal transduction histidine kinase 2386723 5078287 Sputcn32_2082 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001183602.1 2385329 R 319224 CDS YP_001183603.1 146293179 5078288 complement(2386795..2387454) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO2104 DNA-binding response regulator YgiX, putative; two component transcriptional regulator 2387454 5078288 Sputcn32_2083 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001183603.1 2386795 R 319224 CDS YP_001183604.1 146293180 5078289 complement(2387465..2388292) 1 NC_009438.1 PFAM: ApbE family lipoprotein; KEGG: shm:Shewmr7_2151 ApbE family lipoprotein; ApbE family lipoprotein 2388292 5078289 Sputcn32_2084 Shewanella putrefaciens CN-32 ApbE family lipoprotein YP_001183604.1 2387465 R 319224 CDS YP_001183605.1 146293181 5078290 complement(2388531..2389850) 1 NC_009438.1 KEGG: shm:Shewmr7_2152 hypothetical protein; hypothetical protein 2389850 5078290 Sputcn32_2085 Shewanella putrefaciens CN-32 hypothetical protein YP_001183605.1 2388531 R 319224 CDS YP_001183606.1 146293182 5078291 complement(2389929..2390147) 1 NC_009438.1 KEGG: shm:Shewmr7_2153 lipoprotein, putative; putative lipoprotein 2390147 5078291 Sputcn32_2086 Shewanella putrefaciens CN-32 putative lipoprotein YP_001183606.1 2389929 R 319224 CDS YP_001183607.1 146293183 5078292 complement(2390151..2390618) 1 NC_009438.1 PFAM: Redoxin domain protein; KEGG: shm:Shewmr7_2154 redoxin domain protein; redoxin domain-containing protein 2390618 5078292 Sputcn32_2087 Shewanella putrefaciens CN-32 redoxin domain-containing protein YP_001183607.1 2390151 R 319224 CDS YP_001183608.1 146293184 5078293 2390983..2392119 1 NC_009438.1 KEGG: son:SO2099 hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: NADH ubiquinone oxidoreductase, 20 kDa subunit; Nickel-iron dehydrogenase small subunit, N-terminal domain protein; hydrogenase (NiFe) small subunit HydA 2392119 5078293 Sputcn32_2088 Shewanella putrefaciens CN-32 hydrogenase (NiFe) small subunit HydA YP_001183608.1 2390983 D 319224 CDS YP_001183609.1 146293185 5078294 2392123..2393826 1 NC_009438.1 PFAM: nickel-dependent hydrogenase, large subunit; KEGG: son:SO2098 hydrogenase large chain; nickel-dependent hydrogenase, large subunit 2393826 5078294 Sputcn32_2089 Shewanella putrefaciens CN-32 nickel-dependent hydrogenase, large subunit YP_001183609.1 2392123 D 319224 CDS YP_001183610.1 146293186 5078295 2393846..2394520 1 NC_009438.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; PFAM: cytochrome B561; KEGG: shm:Shewmr7_2157 Ni/Fe-hydrogenase, b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 2394520 5078295 Sputcn32_2090 Shewanella putrefaciens CN-32 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_001183610.1 2393846 D 319224 CDS YP_001183611.1 146293187 5078296 2394528..2395091 1 NC_009438.1 TIGRFAM: hydrogenase maturation protease; hydrogenase expression/formation protein; PFAM: peptidase M52, hydrogen uptake protein; KEGG: son:SO2096 hydrogenase expression/formation protein; hydrogenase expression/formation protein 2395091 5078296 Sputcn32_2091 Shewanella putrefaciens CN-32 hydrogenase expression/formation protein YP_001183611.1 2394528 D 319224 CDS YP_001183612.1 146293188 5078297 2395072..2396925 1 NC_009438.1 KEGG: son:SO2095 hypothetical protein; hypothetical protein 2396925 5078297 Sputcn32_2092 Shewanella putrefaciens CN-32 hypothetical protein YP_001183612.1 2395072 D 319224 CDS YP_001183613.1 146293189 5078298 2396956..2399361 1 NC_009438.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC, N-terminal domain; zinc finger, HypF domain protein; KEGG: son:SO2094 hydrogenase maturation protein HypF; (NiFe) hydrogenase maturation protein HypF 2399361 5078298 Sputcn32_2093 Shewanella putrefaciens CN-32 (NiFe) hydrogenase maturation protein HypF YP_001183613.1 2396956 D 319224 CDS YP_001183614.1 146293190 5078299 2399585..2401210 1 NC_009438.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: pat:Patl_2284 sodium/hydrogen exchanger; sodium/hydrogen exchanger 2401210 5078299 Sputcn32_2094 Shewanella putrefaciens CN-32 sodium/hydrogen exchanger YP_001183614.1 2399585 D 319224 CDS YP_001183615.1 146293191 5078300 2401241..2402203 1 NC_009438.1 PFAM: UspA domain protein; KEGG: pat:Patl_2285 UspA; UspA domain-containing protein 2402203 5078300 Sputcn32_2095 Shewanella putrefaciens CN-32 UspA domain-containing protein YP_001183615.1 2401241 D 319224 CDS YP_001183616.1 146293192 5078301 complement(2402272..2403378) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shm:Shewmr7_1872 diguanylate cyclase; diguanylate cyclase 2403378 5078301 Sputcn32_2096 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001183616.1 2402272 R 319224 CDS YP_001183617.1 146293193 5078302 complement(2403446..2405071) 1 NC_009438.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: she:Shewmr4_2103 sulfatase; sulfatase 2405071 5078302 Sputcn32_2097 Shewanella putrefaciens CN-32 sulfatase YP_001183617.1 2403446 R 319224 CDS YP_001183618.1 146293194 5078303 complement(2405360..2407465) 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; peptidase S9A, prolyl oligopeptidase domain protein beta-propeller; KEGG: son:SO2047 prolyl oligopeptidase family protein; prolyl oligopeptidase 2407465 5078303 Sputcn32_2098 Shewanella putrefaciens CN-32 prolyl oligopeptidase YP_001183618.1 2405360 R 319224 CDS YP_001183619.1 146293195 5078304 complement(2407677..2408126) 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: shm:Shewmr7_1869 transcriptional regulator, MarR family; MarR family transcriptional regulator 2408126 5078304 Sputcn32_2099 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001183619.1 2407677 R 319224 CDS YP_001183620.1 146293196 5078305 complement(2408126..2409289) 1 NC_009438.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: shm:Shewmr7_1868 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2409289 5078305 Sputcn32_2100 Shewanella putrefaciens CN-32 cation diffusion facilitator family transporter YP_001183620.1 2408126 R 319224 CDS YP_001183621.1 146293197 5078306 2409824..2410321 1 NC_009438.1 KEGG: son:SO2044 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase 2410321 5078306 Sputcn32_2101 Shewanella putrefaciens CN-32 lactoylglutathione lyase YP_001183621.1 2409824 D 319224 CDS YP_001183622.1 146293198 5078307 complement(2410395..2411018) 1 NC_009438.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; putative sulfite oxidase subunit YedZ 2411018 5078307 Sputcn32_2102 Shewanella putrefaciens CN-32 putative sulfite oxidase subunit YedZ YP_001183622.1 2410395 R 319224 CDS YP_001183623.1 146293199 5078308 complement(2411041..2412075) 1 NC_009438.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; putative sulfite oxidase subunit YedY 2412075 5078308 Sputcn32_2103 Shewanella putrefaciens CN-32 putative sulfite oxidase subunit YedY YP_001183623.1 2411041 R 319224 CDS YP_001183624.1 146293200 5078309 2412318..2413874 1 NC_009438.1 PFAM: protein of unknown function DUF195; KEGG: son:SO2041 hypothetical protein; hypothetical protein 2413874 5078309 Sputcn32_2104 Shewanella putrefaciens CN-32 hypothetical protein YP_001183624.1 2412318 D 319224 CDS YP_001183625.1 146293201 5078310 2413952..2415877 1 NC_009438.1 PFAM: Lytic transglycosylase, catalytic; KEGG: shm:Shewmr7_1863 lytic transglycosylase, catalytic; lytic transglycosylase, catalytic 2415877 5078310 Sputcn32_2105 Shewanella putrefaciens CN-32 lytic transglycosylase, catalytic YP_001183625.1 2413952 D 319224 CDS YP_001183626.1 146293202 5078311 2416093..2416797 1 NC_009438.1 PFAM: EAL domain protein; KEGG: she:Shewmr4_2112 diguanylate phosphodiesterase; diguanylate phosphodiesterase 2416797 5078311 Sputcn32_2106 Shewanella putrefaciens CN-32 diguanylate phosphodiesterase YP_001183626.1 2416093 D 319224 CDS YP_001183627.1 146293203 5078312 2416944..2417855 1 NC_009438.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: son:SO2153 MoxR protein; ATPase 2417855 5078312 Sputcn32_2107 Shewanella putrefaciens CN-32 ATPase YP_001183627.1 2416944 D 319224 CDS YP_001183628.1 146293204 5078313 2417927..2418991 1 NC_009438.1 PFAM: protein of unknown function DUF58; KEGG: shm:Shewmr7_1855 protein of unknown function DUF58; hypothetical protein 2418991 5078313 Sputcn32_2108 Shewanella putrefaciens CN-32 hypothetical protein YP_001183628.1 2417927 D 319224 CDS YP_001183629.1 146293205 5078314 2418988..2421117 1 NC_009438.1 PFAM: transglutaminase domain protein; KEGG: son:SO2150 transglutaminase family protein; transglutaminase domain-containing protein 2421117 5078314 Sputcn32_2109 Shewanella putrefaciens CN-32 transglutaminase domain-containing protein YP_001183629.1 2418988 D 319224 CDS YP_001183630.1 146293206 5078315 2421269..2424949 1 NC_009438.1 TIGRFAM: exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; KEGG: she:Shewmr4_1775 exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 2424949 5078315 Sputcn32_2110 Shewanella putrefaciens CN-32 exodeoxyribonuclease V subunit gamma YP_001183630.1 2421269 D 319224 CDS YP_001183631.1 146293207 5078316 2424967..2428722 1 NC_009438.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; PFAM: UvrD/REP helicase; KEGG: shm:Shewmr7_1852 exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit beta 2428722 5078316 Sputcn32_2111 Shewanella putrefaciens CN-32 exodeoxyribonuclease V subunit beta YP_001183631.1 2424967 D 319224 CDS YP_001183632.1 146293208 5078317 2428719..2430779 1 NC_009438.1 KEGG: shm:Shewmr7_1851 exodeoxyribonuclease V, alpha subunit; TIGRFAM: exodeoxyribonuclease V, alpha subunit; SMART: AAA ATPase; exodeoxyribonuclease V subunit alpha 2430779 5078317 Sputcn32_2112 Shewanella putrefaciens CN-32 exodeoxyribonuclease V subunit alpha YP_001183632.1 2428719 D 319224 CDS YP_001183633.1 146293209 5078318 2430792..2431184 1 NC_009438.1 KEGG: son:SO2146 hypothetical protein; hypothetical protein 2431184 5078318 Sputcn32_2113 Shewanella putrefaciens CN-32 hypothetical protein YP_001183633.1 2430792 D 319224 CDS YP_001183634.1 146293210 5078319 2431265..2431903 1 NC_009438.1 KEGG: son:SO2245 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 2431903 5078319 Sputcn32_2114 Shewanella putrefaciens CN-32 DNA polymerase III subunit epsilon YP_001183634.1 2431265 D 319224 CDS YP_001183635.1 146293211 5078320 complement(2431976..2432698) 1 NC_009438.1 KEGG: son:SO2241 hypothetical protein; hypothetical protein 2432698 5078320 Sputcn32_2115 Shewanella putrefaciens CN-32 hypothetical protein YP_001183635.1 2431976 R 319224 CDS YP_001183636.1 146293212 5078321 2433058..2434695 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: shm:Shewmr7_1845 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2434695 5078321 Sputcn32_2116 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183636.1 2433058 D 319224 CDS YP_001183637.1 146293213 5078322 2434828..2435223 1 NC_009438.1 KEGG: shm:Shewmr7_1844 hypothetical protein; hypothetical protein 2435223 5078322 Sputcn32_2117 Shewanella putrefaciens CN-32 hypothetical protein YP_001183637.1 2434828 D 319224 CDS YP_001183638.1 146293214 5078323 2435246..2435503 1 NC_009438.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: son:SO2238 phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 2435503 5078323 Sputcn32_2118 Shewanella putrefaciens CN-32 phosphotransferase system, phosphocarrier protein HPr YP_001183638.1 2435246 D 319224 CDS YP_001183639.1 146293215 5078324 2435547..2437250 1 NC_009438.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing enzyme; PEP-utilising enzyme, mobile region; PEP-utilising enzyme domain protein; KEGG: she:Shewmr4_1764 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2437250 5078324 Sputcn32_2119 Shewanella putrefaciens CN-32 phosphoenolpyruvate-protein phosphotransferase YP_001183639.1 2435547 D 319224 CDS YP_001183640.1 146293216 5078325 2437324..2437833 1 NC_009438.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 2437833 5078325 Sputcn32_2120 Shewanella putrefaciens CN-32 PTS system glucose-specific transporter YP_001183640.1 2437324 D 319224 CDS YP_001183641.1 146293217 5078326 2438150..2440018 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; methyl-accepting chemotaxis protein domain protein; KEGG: vvu:VV21623 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2440018 5078326 Sputcn32_2121 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183641.1 2438150 D 319224 CDS YP_001183642.1 146293218 5078327 2440069..2440476 1 NC_009438.1 PFAM: arsenate reductase and related; KEGG: shm:Shewmr7_2120 hypothetical protein; arsenate reductase-like protein 2440476 5078327 Sputcn32_2122 Shewanella putrefaciens CN-32 arsenate reductase-like protein YP_001183642.1 2440069 D 319224 CDS YP_001183643.1 146293219 5078328 2440476..2441615 1 NC_009438.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 2441615 5078328 Sputcn32_2123 Shewanella putrefaciens CN-32 succinyl-diaminopimelate desuccinylase YP_001183643.1 2440476 D 319224 CDS YP_001183644.1 146293220 5078329 2441609..2442325 1 NC_009438.1 PFAM: peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; KEGG: son:SO2472 D-alanyl-D-alanine carboxypeptidase-related protein; peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin 2442325 5078329 Sputcn32_2124 Shewanella putrefaciens CN-32 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysin YP_001183644.1 2441609 D 319224 CDS YP_001183645.1 146293221 5078330 2442381..2443223 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; KEGG: son:SO2473 hydrolase, alpha/beta fold family; alpha/beta hydrolase fold domain-containing protein 2443223 5078330 Sputcn32_2125 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001183645.1 2442381 D 319224 CDS YP_001183646.1 146293222 5078331 2443343..2443960 1 NC_009438.1 PFAM: carbonic anhydrase; KEGG: she:Shewmr4_1854 carbonate dehydratase; carbonate dehydratase 2443960 5078331 Sputcn32_2126 Shewanella putrefaciens CN-32 carbonate dehydratase YP_001183646.1 2443343 D 319224 CDS YP_001183647.1 146293223 5078332 2444193..2444930 1 NC_009438.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2444930 5078332 Sputcn32_2127 Shewanella putrefaciens CN-32 3-deoxy-manno-octulosonate cytidylyltransferase YP_001183647.1 2444193 D 319224 CDS YP_001183648.1 146293224 5078333 2444966..2445217 1 NC_009438.1 KEGG: son:SO2479 hypothetical protein; hypothetical protein 2445217 5078333 Sputcn32_2128 Shewanella putrefaciens CN-32 hypothetical protein YP_001183648.1 2444966 D 319224 CDS YP_001183649.1 146293225 5078334 complement(2445331..2445801) 1 NC_009438.1 KEGG: shm:Shewmr7_1839 hypothetical protein; hypothetical protein 2445801 5078334 Sputcn32_2129 Shewanella putrefaciens CN-32 hypothetical protein YP_001183649.1 2445331 R 319224 CDS YP_001183650.1 146293226 5078335 complement(2446001..2447005) 1 NC_009438.1 PFAM: Rhodanese domain protein; KEGG: she:Shewmr4_1760 rhodanese domain protein; hypothetical protein 2447005 5078335 Sputcn32_2130 Shewanella putrefaciens CN-32 hypothetical protein YP_001183650.1 2446001 R 319224 CDS YP_001183651.1 146293227 5080007 2447409..2447615 1 NC_009438.1 KEGG: shm:Shewmr7_1836 hypothetical protein; hypothetical protein 2447615 5080007 Sputcn32_2131 Shewanella putrefaciens CN-32 hypothetical protein YP_001183651.1 2447409 D 319224 CDS YP_001183652.1 146293228 5080008 complement(2447681..2449453) 1 NC_009438.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: she:Shewmr4_1755 sulphate transporter; sulfate transporter 2449453 5080008 Sputcn32_2132 Shewanella putrefaciens CN-32 sulfate transporter YP_001183652.1 2447681 R 319224 CDS YP_001183653.1 146293229 5080009 complement(2449634..2450260) 1 NC_009438.1 KEGG: shm:Shewmr7_1834 lysine exporter protein (LysE/YggA); lysine exporter protein (LysE/YggA) 2450260 5080009 Sputcn32_2133 Shewanella putrefaciens CN-32 lysine exporter protein (LysE/YggA) YP_001183653.1 2449634 R 319224 CDS YP_001183654.1 146293230 5080010 2450353..2451717 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: she:Shewmr4_1753 transcriptional regulator, GntR family; GntR family transcriptional regulator 2451717 5080010 Sputcn32_2134 Shewanella putrefaciens CN-32 GntR family transcriptional regulator YP_001183654.1 2450353 D 319224 CDS YP_001183655.1 146293231 5080011 complement(2451844..2453718) 1 NC_009438.1 KEGG: she:Shewmr4_1752 alkaline phosphatase; alkaline phosphatase 2453718 5080011 Sputcn32_2135 Shewanella putrefaciens CN-32 alkaline phosphatase YP_001183655.1 2451844 R 319224 CDS YP_001183656.1 146293232 5080012 2454190..2455410 1 NC_009438.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_1751 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 2455410 5080012 Sputcn32_2136 Shewanella putrefaciens CN-32 Bcr/CflA subfamily drug resistance transporter YP_001183656.1 2454190 D 319224 CDS YP_001183657.1 146293233 5080013 2455456..2455692 1 NC_009438.1 hypothetical protein 2455692 5080013 Sputcn32_2137 Shewanella putrefaciens CN-32 hypothetical protein YP_001183657.1 2455456 D 319224 CDS YP_001183658.1 146293234 5080014 2455825..2457543 1 NC_009438.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: she:Shewmr4_1750 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase 3 catalytic subunit 2457543 5080014 Sputcn32_2138 Shewanella putrefaciens CN-32 acetolactate synthase 3 catalytic subunit YP_001183658.1 2455825 D 319224 CDS YP_001183659.1 146293235 5080015 2457543..2458037 1 NC_009438.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2458037 ilvH 5080015 ilvH Shewanella putrefaciens CN-32 acetolactate synthase 3 regulatory subunit YP_001183659.1 2457543 D 319224 CDS YP_001183660.1 146293236 5080016 complement(2458108..2458551) 1 NC_009438.1 PFAM: heat shock protein Hsp20; KEGG: son:SO2277 16 kDa heat shock protein A; heat shock protein Hsp20 2458551 5080016 Sputcn32_2140 Shewanella putrefaciens CN-32 heat shock protein Hsp20 YP_001183660.1 2458108 R 319224 CDS YP_001183661.1 146293237 5080017 complement(2458789..2459220) 1 NC_009438.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2459220 ndk 5080017 ndk Shewanella putrefaciens CN-32 nucleoside diphosphate kinase YP_001183661.1 2458789 R 319224 CDS YP_001183662.1 146293238 5080018 complement(2459816..2460013) 1 NC_009438.1 PFAM: protein of unknown function DUF528; KEGG: shm:Shewmr7_1826 protein of unknown function DUF528; hypothetical protein 2460013 5080018 Sputcn32_2142 Shewanella putrefaciens CN-32 hypothetical protein YP_001183662.1 2459816 R 319224 CDS YP_001183663.1 146293239 5080019 complement(2460085..2460990) 1 NC_009438.1 TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: shm:Shewmr7_1825 alpha-L-glutamate ligases, RimK family; alpha-L-glutamate ligase 2460990 5080019 Sputcn32_2143 Shewanella putrefaciens CN-32 alpha-L-glutamate ligase YP_001183663.1 2460085 R 319224 CDS YP_001183664.1 146293240 5080020 complement(2461149..2461487) 1 NC_009438.1 TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: shm:Shewmr7_1824 ferredoxin, 2Fe-2S type, ISC system; ferredoxin, 2Fe-2S type, ISC system 2461487 5080020 Sputcn32_2144 Shewanella putrefaciens CN-32 ferredoxin, 2Fe-2S type, ISC system YP_001183664.1 2461149 R 319224 CDS YP_001183665.1 146293241 5080021 complement(2461496..2463358) 1 NC_009438.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 2463358 hscA 5080021 hscA Shewanella putrefaciens CN-32 chaperone protein HscA YP_001183665.1 2461496 R 319224 CDS YP_001183666.1 146293242 5080022 complement(2463426..2463950) 1 NC_009438.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 2463950 hscB 5080022 hscB Shewanella putrefaciens CN-32 co-chaperone HscB YP_001183666.1 2463426 R 319224 CDS YP_001183667.1 146293243 5080023 complement(2463967..2464290) 1 NC_009438.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly protein IscA; PFAM: HesB/YadR/YfhF-family protein; KEGG: shm:Shewmr7_1821 iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly protein IscA 2464290 5080023 Sputcn32_2147 Shewanella putrefaciens CN-32 iron-sulfur cluster assembly protein IscA YP_001183667.1 2463967 R 319224 CDS YP_001183668.1 146293244 5080024 complement(2464305..2464688) 1 NC_009438.1 TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: shm:Shewmr7_1820 FeS cluster assembly scaffold IscU; scaffold protein 2464688 5080024 Sputcn32_2148 Shewanella putrefaciens CN-32 scaffold protein YP_001183668.1 2464305 R 319224 CDS YP_001183669.1 146293245 5080025 complement(2464727..2465941) 1 NC_009438.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 2465941 5080025 Sputcn32_2149 Shewanella putrefaciens CN-32 cysteine desulfurase YP_001183669.1 2464727 R 319224 CDS YP_001183670.1 146293246 5080026 complement(2466018..2466479) 1 NC_009438.1 TIGRFAM: putative transcriptional regulator, Rrf2 family; iron-sulfur cluster assembly transcription factor IscR; PFAM: protein of unknown function UPF0074; KEGG: son:SO2263 Rrf2 family protein; BadM/Rrf2 family transcriptional regulator 2466479 5080026 Sputcn32_2150 Shewanella putrefaciens CN-32 BadM/Rrf2 family transcriptional regulator YP_001183670.1 2466018 R 319224 CDS YP_001183671.1 146293247 5080027 complement(2466829..2467650) 1 NC_009438.1 TIGRFAM: serine O-acetyltransferase; KEGG: shm:Shewmr7_1817 serine O-acetyltransferase; serine O-acetyltransferase 2467650 5080027 Sputcn32_2151 Shewanella putrefaciens CN-32 serine O-acetyltransferase YP_001183671.1 2466829 R 319224 CDS YP_001183672.1 146293248 5080028 complement(2467692..2468417) 1 NC_009438.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: son:SO2261 RNA methyltransferase, TrmH family, group 1; RNA methyltransferase 2468417 5080028 Sputcn32_2152 Shewanella putrefaciens CN-32 RNA methyltransferase YP_001183672.1 2467692 R 319224 CDS YP_001183673.1 146293249 5080029 2468571..2469374 1 NC_009438.1 PFAM: inositol monophosphatase; KEGG: shm:Shewmr7_1815 inositol-phosphate phosphatase; inositol-phosphate phosphatase 2469374 5080029 Sputcn32_2153 Shewanella putrefaciens CN-32 inositol-phosphate phosphatase YP_001183673.1 2468571 D 319224 CDS YP_001183674.1 146293250 5080030 complement(2469478..2470728) 1 NC_009438.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: she:Shewmr4_1734 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 2470728 5080030 Sputcn32_2154 Shewanella putrefaciens CN-32 LolC/E family lipoprotein releasing system, transmembrane protein YP_001183674.1 2469478 R 319224 CDS YP_001183675.1 146293251 5080031 complement(2470725..2471420) 1 NC_009438.1 KEGG: shm:Shewmr7_1813 lipoprotein releasing system, ATP-binding protein; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 2471420 5080031 Sputcn32_2155 Shewanella putrefaciens CN-32 lipoprotein releasing system, ATP-binding protein YP_001183675.1 2470725 R 319224 CDS YP_001183676.1 146293252 5080032 complement(2471502..2472734) 1 NC_009438.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: shm:Shewmr7_1812 lipoprotein releasing system, transmembrane protein, LolC/E family; LolC/E family lipoprotein releasing system, transmembrane protein 2472734 5080032 Sputcn32_2156 Shewanella putrefaciens CN-32 LolC/E family lipoprotein releasing system, transmembrane protein YP_001183676.1 2471502 R 319224 CDS YP_001183677.1 146293253 5080033 2472829..2473434 1 NC_009438.1 KEGG: son:SO2256 hypothetical protein; hypothetical protein 2473434 5080033 Sputcn32_2157 Shewanella putrefaciens CN-32 hypothetical protein YP_001183677.1 2472829 D 319224 CDS YP_001183678.1 146293254 5080034 2473522..2477010 1 NC_009438.1 KEGG: shm:Shewmr7_1810 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; transcription-repair coupling factor 2477010 5080034 Sputcn32_2158 Shewanella putrefaciens CN-32 transcription-repair coupling factor YP_001183678.1 2473522 D 319224 CDS YP_001183679.1 146293255 5080035 2477010..2478020 1 NC_009438.1 KEGG: son:SO2254 hypothetical protein; hypothetical protein 2478020 5080035 Sputcn32_2159 Shewanella putrefaciens CN-32 hypothetical protein YP_001183679.1 2477010 D 319224 CDS YP_001183680.1 146293256 5080036 complement(2478106..2478381) 1 NC_009438.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 2478381 5080036 Sputcn32_2160 Shewanella putrefaciens CN-32 acylphosphatase YP_001183680.1 2478106 R 319224 CDS YP_001183681.1 146293257 5080037 complement(2479016..2480716) 1 NC_009438.1 KEGG: son:SO1425 hypothetical protein; hypothetical protein 2480716 5080037 Sputcn32_2161 Shewanella putrefaciens CN-32 hypothetical protein YP_001183681.1 2479016 R 319224 CDS YP_001183682.1 146293258 5080038 complement(2480726..2483002) 1 NC_009438.1 KEGG: son:SO1424 hypothetical protein; hypothetical protein 2483002 5080038 Sputcn32_2162 Shewanella putrefaciens CN-32 hypothetical protein YP_001183682.1 2480726 R 319224 CDS YP_001183683.1 146293259 5080039 complement(2483291..2483452) 1 NC_009438.1 KEGG: son:SO2209 hypothetical protein; hypothetical protein 2483452 5080039 Sputcn32_2163 Shewanella putrefaciens CN-32 hypothetical protein YP_001183683.1 2483291 R 319224 CDS YP_001183684.1 146293260 5080040 2483589..2484185 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: shm:Shewmr7_3899 phage integrase family protein; phage integrase family protein 2484185 5080040 Sputcn32_2164 Shewanella putrefaciens CN-32 phage integrase family protein YP_001183684.1 2483589 D 319224 CDS YP_001183685.1 146293261 5080041 2484404..2491750 1 NC_009438.1 TIGRFAM: YD repeat protein; PFAM: Fibronectin, type III domain protein; YD repeat-containing protein; FG-GAP repeat protein; KEGG: shm:Shewmr7_1124 YD repeat protein; YD repeat-containing protein 2491750 5080041 Sputcn32_2165 Shewanella putrefaciens CN-32 YD repeat-containing protein YP_001183685.1 2484404 D 319224 CDS YP_001183686.1 146293262 5080042 2491753..2492133 1 NC_009438.1 hypothetical protein 2492133 5080042 Sputcn32_2166 Shewanella putrefaciens CN-32 hypothetical protein YP_001183686.1 2491753 D 319224 CDS YP_001183687.1 146293263 5080043 2492217..2494085 1 NC_009438.1 TIGRFAM: YD repeat protein; KEGG: shm:Shewmr7_1180 YD repeat protein; YD repeat-containing protein 2494085 5080043 Sputcn32_2167 Shewanella putrefaciens CN-32 YD repeat-containing protein YP_001183687.1 2492217 D 319224 CDS YP_001183688.1 146293264 5080044 2494063..2494596 1 NC_009438.1 hypothetical protein 2494596 5080044 Sputcn32_2168 Shewanella putrefaciens CN-32 hypothetical protein YP_001183688.1 2494063 D 319224 CDS YP_001183689.1 146293265 5080045 complement(2495738..2496295) 1 NC_009438.1 PFAM: protein of unknown function UPF0227; KEGG: son:SO2251 conserved hypothetical protein; hypothetical protein 2496295 5080045 Sputcn32_2169 Shewanella putrefaciens CN-32 hypothetical protein YP_001183689.1 2495738 R 319224 CDS YP_001183690.1 146293266 5080046 complement(2496353..2497381) 1 NC_009438.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2497381 5080046 Sputcn32_2170 Shewanella putrefaciens CN-32 beta-hexosaminidase YP_001183690.1 2496353 R 319224 CDS YP_001183691.1 146293267 5080047 2497771..2499147 1 NC_009438.1 KEGG: shm:Shewmr7_1804 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 2499147 5080047 Sputcn32_2171 Shewanella putrefaciens CN-32 L-serine dehydratase 1 YP_001183691.1 2497771 D 319224 CDS YP_001183692.1 146293268 5080048 complement(2499284..2500009) 1 NC_009438.1 KEGG: son:SO2247 hypothetical protein; hypothetical protein 2500009 5080048 Sputcn32_2172 Shewanella putrefaciens CN-32 hypothetical protein YP_001183692.1 2499284 R 319224 CDS YP_001183693.1 146293269 5080049 complement(2500211..2501053) 1 NC_009438.1 PFAM: putative esterase; KEGG: shm:Shewmr7_2190 carboxylesterase; carboxylesterase 2501053 5080049 Sputcn32_2173 Shewanella putrefaciens CN-32 carboxylesterase YP_001183693.1 2500211 R 319224 CDS YP_001183694.1 146293270 5080050 complement(2501193..2502332) 1 NC_009438.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: shm:Shewmr7_2191 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 2502332 5080050 Sputcn32_2174 Shewanella putrefaciens CN-32 alcohol dehydrogenase YP_001183694.1 2501193 R 319224 CDS YP_001183695.1 146293271 5080051 2502508..2503386 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_2192 transcriptional regulator, LysR family; LysR family transcriptional regulator 2503386 5080051 Sputcn32_2175 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183695.1 2502508 D 319224 CDS YP_001183696.1 146293272 5080052 complement(2503439..2504728) 1 NC_009438.1 PFAM: FAD dependent oxidoreductase; KEGG: shm:Shewmr7_2193 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2504728 5080052 Sputcn32_2176 Shewanella putrefaciens CN-32 FAD dependent oxidoreductase YP_001183696.1 2503439 R 319224 CDS YP_001183697.1 146293273 5080053 2505233..2505868 1 NC_009438.1 PFAM: protein of unknown function DUF938; KEGG: son:SO2050 hypothetical protein; hypothetical protein 2505868 5080053 Sputcn32_2177 Shewanella putrefaciens CN-32 hypothetical protein YP_001183697.1 2505233 D 319224 CDS YP_001183698.1 146293274 5080054 2506275..2507270 1 NC_009438.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2507270 hisG 5080054 hisG Shewanella putrefaciens CN-32 ATP phosphoribosyltransferase YP_001183698.1 2506275 D 319224 CDS YP_001183699.1 146293275 5080055 2507274..2508575 1 NC_009438.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2508575 hisD 5080055 hisD Shewanella putrefaciens CN-32 histidinol dehydrogenase YP_001183699.1 2507274 D 319224 CDS YP_001183700.1 146293276 5080056 2508666..2509787 1 NC_009438.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2509787 5080056 Sputcn32_2180 Shewanella putrefaciens CN-32 histidinol-phosphate aminotransferase YP_001183700.1 2508666 D 319224 CDS YP_001183701.1 146293277 5080303 2509817..2510908 1 NC_009438.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2510908 5080303 Sputcn32_2181 Shewanella putrefaciens CN-32 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_001183701.1 2509817 D 319224 CDS YP_001183702.1 146293278 5080304 2510940..2511767 1 NC_009438.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2511767 hisH 5080304 hisH Shewanella putrefaciens CN-32 imidazole glycerol phosphate synthase subunit HisH YP_001183702.1 2510940 D 319224 CDS YP_001183703.1 146293279 5080305 2511838..2512575 1 NC_009438.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2512575 5080305 Sputcn32_2183 Shewanella putrefaciens CN-32 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_001183703.1 2511838 D 319224 CDS YP_001183704.1 146293280 5080306 2512557..2513330 1 NC_009438.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2513330 5080306 Sputcn32_2184 Shewanella putrefaciens CN-32 imidazole glycerol phosphate synthase subunit HisF YP_001183704.1 2512557 D 319224 CDS YP_001183705.1 146293281 5080307 2513469..2514110 1 NC_009438.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 2514110 5080307 Sputcn32_2185 Shewanella putrefaciens CN-32 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_001183705.1 2513469 D 319224 CDS YP_001183706.1 146293282 5080308 2514628..2515815 1 NC_009438.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane; KEGG: she:Shewmr4_1792 aromatic amino acid transporter; aromatic amino acid transporter 2515815 5080308 Sputcn32_2186 Shewanella putrefaciens CN-32 aromatic amino acid transporter YP_001183706.1 2514628 D 319224 CDS YP_001183707.1 146293283 5080309 2516119..2519445 1 NC_009438.1 KEGG: she:Shewmr4_1791 hypothetical protein; hypothetical protein 2519445 5080309 Sputcn32_2187 Shewanella putrefaciens CN-32 hypothetical protein YP_001183707.1 2516119 D 319224 CDS YP_001183708.1 146293284 5080310 2519459..2519677 1 NC_009438.1 KEGG: son:SO2063 hypothetical protein; hypothetical protein 2519677 5080310 Sputcn32_2188 Shewanella putrefaciens CN-32 hypothetical protein YP_001183708.1 2519459 D 319224 CDS YP_001183709.1 146293285 5080311 2519703..2520068 1 NC_009438.1 PFAM: Uncharacterized conserved protein UCP025560; KEGG: shm:Shewmr7_2188 uncharacterized conserved protein UCP025560; hypothetical protein 2520068 5080311 Sputcn32_2189 Shewanella putrefaciens CN-32 hypothetical protein YP_001183709.1 2519703 D 319224 CDS YP_001183710.1 146293286 5080312 complement(2520384..2520896) 1 NC_009438.1 hypothetical protein 2520896 5080312 Sputcn32_2190 Shewanella putrefaciens CN-32 hypothetical protein YP_001183710.1 2520384 R 319224 CDS YP_001183711.1 146293287 5080313 complement(2520969..2521298) 1 NC_009438.1 hypothetical protein 2521298 5080313 Sputcn32_2191 Shewanella putrefaciens CN-32 hypothetical protein YP_001183711.1 2520969 R 319224 CDS YP_001183712.1 146293288 5080314 2521482..2521574 1 NC_009438.1 KEGG: vpa:VP1842 RelB protein; RelB protein 2521574 5080314 Sputcn32_2192 Shewanella putrefaciens CN-32 RelB protein YP_001183712.1 2521482 D 319224 CDS YP_001183713.1 146293289 5080315 complement(2521646..2522179) 1 NC_009438.1 PFAM: protein of unknown function DUF1379; KEGG: she:Shewmr4_1682 protein of unknown function DUF1379; hypothetical protein 2522179 5080315 Sputcn32_2193 Shewanella putrefaciens CN-32 hypothetical protein YP_001183713.1 2521646 R 319224 CDS YP_001183714.1 146293290 5080316 complement(2522380..2523399) 1 NC_009438.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2523399 5080316 Sputcn32_2194 Shewanella putrefaciens CN-32 dihydroorotate dehydrogenase 2 YP_001183714.1 2522380 R 319224 CDS YP_001183715.1 146293291 5080317 complement(2523462..2528306) 1 NC_009438.1 PFAM: NAD-glutamate dehydrogenase; KEGG: shm:Shewmr7_1755 NAD-glutamate dehydrogenase; NAD-glutamate dehydrogenase 2528306 5080317 Sputcn32_2195 Shewanella putrefaciens CN-32 NAD-glutamate dehydrogenase YP_001183715.1 2523462 R 319224 CDS YP_001183716.1 146293292 5080318 complement(2528571..2530886) 1 NC_009438.1 KEGG: shm:Shewmr7_1754 hypothetical protein; hypothetical protein 2530886 5080318 Sputcn32_2196 Shewanella putrefaciens CN-32 hypothetical protein YP_001183716.1 2528571 R 319224 CDS YP_001183717.1 146293293 5080319 complement(2530919..2531932) 1 NC_009438.1 KEGG: son:SO2595 BNR repeat protein; BNR repeat-containing protein 2531932 5080319 Sputcn32_2197 Shewanella putrefaciens CN-32 BNR repeat-containing protein YP_001183717.1 2530919 R 319224 CDS YP_001183718.1 146293294 5080320 complement(2531986..2533350) 1 NC_009438.1 PFAM: protein of unknown function DUF1329; KEGG: she:Shewmr4_1677 protein of unknown function DUF1329; hypothetical protein 2533350 5080320 Sputcn32_2198 Shewanella putrefaciens CN-32 hypothetical protein YP_001183718.1 2531986 R 319224 CDS YP_001183719.1 146293295 5080321 complement(2533364..2535406) 1 NC_009438.1 PFAM: protein of unknown function DUF1302; KEGG: son:SO2597 hypothetical protein; hypothetical protein 2535406 5080321 Sputcn32_2199 Shewanella putrefaciens CN-32 hypothetical protein YP_001183719.1 2533364 R 319224 CDS YP_001183720.1 146293296 5080322 complement(2535745..2535978) 1 NC_009438.1 KEGG: son:SO2598 hypothetical protein; hypothetical protein 2535978 5080322 Sputcn32_2200 Shewanella putrefaciens CN-32 hypothetical protein YP_001183720.1 2535745 R 319224 CDS YP_001183721.1 146293297 5080323 complement(2536006..2538555) 1 NC_009438.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: shm:Shewmr7_1749 aminopeptidase N; aminopeptidase N 2538555 pepN 5080323 pepN Shewanella putrefaciens CN-32 aminopeptidase N YP_001183721.1 2536006 R 319224 CDS YP_001183722.1 146293298 5080324 complement(2538638..2540683) 1 NC_009438.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2540683 5080324 Sputcn32_2202 Shewanella putrefaciens CN-32 carboxy-terminal protease YP_001183722.1 2538638 R 319224 CDS YP_001183723.1 146293299 5080325 complement(2540712..2541353) 1 NC_009438.1 affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 2541353 5080325 Sputcn32_2203 Shewanella putrefaciens CN-32 putative solute/DNA competence effector YP_001183723.1 2540712 R 319224 CDS YP_001183724.1 146293300 5080326 complement(2541633..2542091) 1 NC_009438.1 PFAM: GAF domain protein; KEGG: shm:Shewmr7_1746 putative GAF sensor protein; putative GAF sensor protein 2542091 5080326 Sputcn32_2204 Shewanella putrefaciens CN-32 putative GAF sensor protein YP_001183724.1 2541633 R 319224 CDS YP_001183725.1 146293301 5080327 complement(2542110..2542409) 1 NC_009438.1 PFAM: YebG family protein; KEGG: shm:Shewmr7_1745 YebG family protein; hypothetical protein 2542409 5080327 Sputcn32_2205 Shewanella putrefaciens CN-32 hypothetical protein YP_001183725.1 2542110 R 319224 CDS YP_001183726.1 146293302 5080328 2542617..2543249 1 NC_009438.1 PFAM: Paraquat-inducible protein A; KEGG: she:Shewmr4_1669 paraquat-inducible protein A; paraquat-inducible protein A 2543249 5080328 Sputcn32_2206 Shewanella putrefaciens CN-32 paraquat-inducible protein A YP_001183726.1 2542617 D 319224 CDS YP_001183727.1 146293303 5080329 2543236..2543868 1 NC_009438.1 PFAM: Paraquat-inducible protein A; KEGG: shm:Shewmr7_1743 paraquat-inducible protein A; paraquat-inducible protein A 2543868 5080329 Sputcn32_2207 Shewanella putrefaciens CN-32 paraquat-inducible protein A YP_001183727.1 2543236 D 319224 CDS YP_001183728.1 146293304 5080330 2543855..2546500 1 NC_009438.1 PFAM: Mammalian cell entry related domain protein; KEGG: she:Shewmr4_1667 mammalian cell entry related domain protein; hypothetical protein 2546500 5080330 Sputcn32_2208 Shewanella putrefaciens CN-32 hypothetical protein YP_001183728.1 2543855 D 319224 CDS YP_001183729.1 146293305 5080331 complement(2546597..2547823) 1 NC_009438.1 PFAM: nucleoside recognition domain protein; KEGG: she:Shewmr4_1666 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 2547823 5080331 Sputcn32_2209 Shewanella putrefaciens CN-32 nucleoside recognition domain-containing protein YP_001183729.1 2546597 R 319224 CDS YP_001183730.1 146293306 5080332 2547988..2549505 1 NC_009438.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2549505 yebU 5080332 yebU Shewanella putrefaciens CN-32 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_001183730.1 2547988 D 319224 CDS YP_001183731.1 146293307 5080333 complement(2549812..2550654) 1 NC_009438.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: shm:Shewmr7_1739 hydrolase, TatD family; TatD family hydrolase 2550654 5080333 Sputcn32_2211 Shewanella putrefaciens CN-32 TatD family hydrolase YP_001183731.1 2549812 R 319224 CDS YP_001183732.1 146293308 5080334 complement(2550700..2551026) 1 NC_009438.1 KEGG: shm:Shewmr7_1738 type IV pilus biogenesis protein PilZ; type IV pilus biogenesis protein PilZ 2551026 5080334 Sputcn32_2212 Shewanella putrefaciens CN-32 type IV pilus biogenesis protein PilZ YP_001183732.1 2550700 R 319224 CDS YP_001183733.1 146293309 5080335 complement(2551033..2551989) 1 NC_009438.1 TIGRFAM: DNA polymerase III, delta prime subunit; KEGG: she:Shewmr4_1662 DNA polymerase III, delta prime subunit; DNA polymerase III subunit delta' 2551989 5080335 Sputcn32_2213 Shewanella putrefaciens CN-32 DNA polymerase III subunit delta' YP_001183733.1 2551033 R 319224 CDS YP_001183734.1 146293310 5080336 complement(2551983..2552609) 1 NC_009438.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2552609 tmk 5080336 tmk Shewanella putrefaciens CN-32 thymidylate kinase YP_001183734.1 2551983 R 319224 CDS YP_001183735.1 146293311 5080337 complement(2552632..2553669) 1 NC_009438.1 PFAM: aminodeoxychorismate lyase; KEGG: shm:Shewmr7_1735 aminodeoxychorismate lyase; aminodeoxychorismate lyase 2553669 5080337 Sputcn32_2215 Shewanella putrefaciens CN-32 aminodeoxychorismate lyase YP_001183735.1 2552632 R 319224 CDS YP_001183736.1 146293312 5080338 complement(2553666..2554475) 1 NC_009438.1 PFAM: aminotransferase, class IV; KEGG: son:SO2615 4-amino-4-deoxychorismate lyase; aminotransferase, class IV 2554475 5080338 Sputcn32_2216 Shewanella putrefaciens CN-32 aminotransferase, class IV YP_001183736.1 2553666 R 319224 CDS YP_001183737.1 146293313 5080339 complement(2554481..2555062) 1 NC_009438.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 2555062 dcd 5080339 dcd Shewanella putrefaciens CN-32 deoxycytidine triphosphate deaminase YP_001183737.1 2554481 R 319224 CDS YP_001183738.1 146293314 5080340 complement(2555094..2555732) 1 NC_009438.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 2555732 5080340 Sputcn32_2218 Shewanella putrefaciens CN-32 uridine kinase YP_001183738.1 2555094 R 319224 CDS YP_001183739.1 146293315 5080341 complement(2555744..2556865) 1 NC_009438.1 KEGG: son:SO2618 ATP-binding protein, Mrp/Nbp35 family; ATP-binding Mrp/Nbp35 family protein 2556865 5080341 Sputcn32_2219 Shewanella putrefaciens CN-32 ATP-binding Mrp/Nbp35 family protein YP_001183739.1 2555744 R 319224 CDS YP_001183740.1 146293316 5080342 2557020..2559089 1 NC_009438.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2559089 metG 5080342 metG Shewanella putrefaciens CN-32 methionyl-tRNA synthetase YP_001183740.1 2557020 D 319224 CDS YP_001183741.1 146293317 5080343 2559179..2560135 1 NC_009438.1 PFAM: Auxin Efflux Carrier; KEGG: she:Shewmr4_1654 auxin efflux carrier; auxin efflux carrier 2560135 5080343 Sputcn32_2221 Shewanella putrefaciens CN-32 auxin efflux carrier YP_001183741.1 2559179 D 319224 CDS YP_001183742.1 146293318 5080344 complement(2560197..2560949) 1 NC_009438.1 PFAM: protein of unknown function DUF34; KEGG: son:SO2621 conserved hypothetical protein TIGR00486; hypothetical protein 2560949 5080344 Sputcn32_2222 Shewanella putrefaciens CN-32 hypothetical protein YP_001183742.1 2560197 R 319224 CDS YP_001183743.1 146293319 5080345 complement(2560993..2561463) 1 NC_009438.1 PFAM: 17 kDa surface antigen; KEGG: she:Shewmr4_1652 17 kDa surface antigen; 17 kDa surface antigen 2561463 5080345 Sputcn32_2223 Shewanella putrefaciens CN-32 17 kDa surface antigen YP_001183743.1 2560993 R 319224 CDS YP_001183744.1 146293320 5080346 2561518..2562228 1 NC_009438.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2562228 aat 5080346 aat Shewanella putrefaciens CN-32 leucyl/phenylalanyl-tRNA--protein transferase YP_001183744.1 2561518 D 319224 CDS YP_001183745.1 146293321 5080347 2562218..2562925 1 NC_009438.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2562925 5080347 Sputcn32_2225 Shewanella putrefaciens CN-32 arginyl-tRNA-protein transferase YP_001183745.1 2562218 D 319224 CDS YP_001183746.1 146293322 5080348 2563017..2563235 1 NC_009438.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2563235 infA 5080348 infA Shewanella putrefaciens CN-32 translation initiation factor IF-1 YP_001183746.1 2563017 D 319224 CDS YP_001183747.1 146293323 5080349 complement(2563351..2565618) 1 NC_009438.1 KEGG: son:SO2626 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA 2565618 5080349 Sputcn32_2227 Shewanella putrefaciens CN-32 ATP-dependent Clp protease ATP-binding protein ClpA YP_001183747.1 2563351 R 319224 CDS YP_001183748.1 146293324 5080350 complement(2565662..2565970) 1 NC_009438.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 2565970 clpS 5080350 clpS Shewanella putrefaciens CN-32 ATP-dependent Clp protease adaptor protein ClpS YP_001183748.1 2565662 R 319224 CDS YP_001183749.1 146293325 5080351 2566164..2566370 1 NC_009438.1 KEGG: shm:Shewmr7_1721 cold-shock DNA-binding domain protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; cold-shock DNA-binding domain-containing protein 2566370 5080351 Sputcn32_2229 Shewanella putrefaciens CN-32 cold-shock DNA-binding domain-containing protein YP_001183749.1 2566164 D 319224 CDS YP_001183750.1 146293326 5080352 complement(2566691..2568916) 1 NC_009438.1 KEGG: shm:Shewmr7_1681 isocitrate dehydrogenase, NADP-dependent; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 2568916 5080352 Sputcn32_2230 Shewanella putrefaciens CN-32 isocitrate dehydrogenase YP_001183750.1 2566691 R 319224 CDS YP_001183751.1 146293327 5080203 2569233..2570045 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: she:Shewmr4_1605 pseudouridine synthase, Rsu; pseudouridylate synthase 2570045 5080203 Sputcn32_2231 Shewanella putrefaciens CN-32 pseudouridylate synthase YP_001183751.1 2569233 D 319224 CDS YP_001183752.1 146293328 5080204 2570113..2570607 1 NC_009438.1 PFAM: NUDIX hydrolase; KEGG: son:SO2631 MutT/nudix family protein; NUDIX hydrolase 2570607 5080204 Sputcn32_2232 Shewanella putrefaciens CN-32 NUDIX hydrolase YP_001183752.1 2570113 D 319224 CDS YP_001183753.1 146293329 5080205 2570820..2571938 1 NC_009438.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2571938 mnmA 5080205 mnmA Shewanella putrefaciens CN-32 tRNA-specific 2-thiouridylase MnmA YP_001183753.1 2570820 D 319224 CDS YP_001183754.1 146293330 5080206 2571942..2572559 1 NC_009438.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2572559 5080206 Sputcn32_2234 Shewanella putrefaciens CN-32 hypothetical protein YP_001183754.1 2571942 D 319224 CDS YP_001183755.1 146293331 5080207 2572589..2573959 1 NC_009438.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2573959 5080207 Sputcn32_2235 Shewanella putrefaciens CN-32 adenylosuccinate lyase YP_001183755.1 2572589 D 319224 CDS YP_001183756.1 146293332 5080208 2574112..2575251 1 NC_009438.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji, jmjC domain protein; KEGG: she:Shewmr4_1600 cupin 4 family protein; cupin 4 family protein 2575251 5080208 Sputcn32_2236 Shewanella putrefaciens CN-32 cupin 4 family protein YP_001183756.1 2574112 D 319224 CDS YP_001183757.1 146293333 5080209 complement(2575430..2575879) 1 NC_009438.1 KEGG: son:SO2637 hypothetical protein; hypothetical protein 2575879 5080209 Sputcn32_2237 Shewanella putrefaciens CN-32 hypothetical protein YP_001183757.1 2575430 R 319224 CDS YP_001183758.1 146293334 5080210 2576160..2577194 1 NC_009438.1 PFAM: Glu/Leu/Phe/Val dehydrogenase, C terminal; Glu/Leu/Phe/Val dehydrogenase, dimerisation region; KEGG: she:Shewmr4_1598 Glu/Leu/Phe/Val dehydrogenase, dimerisation region; Glu/Leu/Phe/Val dehydrogenase 2577194 5080210 Sputcn32_2238 Shewanella putrefaciens CN-32 Glu/Leu/Phe/Val dehydrogenase YP_001183758.1 2576160 D 319224 CDS YP_001183759.1 146293335 5080211 2577386..2577730 1 NC_009438.1 KEGG: shm:Shewmr7_1672 hypothetical protein; hypothetical protein 2577730 5080211 Sputcn32_2239 Shewanella putrefaciens CN-32 hypothetical protein YP_001183759.1 2577386 D 319224 CDS YP_001183760.1 146293336 5080212 complement(2577867..2578340) 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: son:SO2640 transcriptional regulator, MarR family; MarR family transcriptional regulator 2578340 5080212 Sputcn32_2240 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001183760.1 2577867 R 319224 CDS YP_001183761.1 146293337 5080213 complement(2578428..2578901) 1 NC_009438.1 PFAM: protein of unknown function DUF1285; KEGG: son:SO2642 hypothetical protein; hypothetical protein 2578901 5080213 Sputcn32_2241 Shewanella putrefaciens CN-32 hypothetical protein YP_001183761.1 2578428 R 319224 CDS YP_001183762.1 146293338 5080214 complement(2579023..2582064) 1 NC_009438.1 PFAM: FAD linked oxidase domain protein; KEGG: she:Shewmr4_1593 FAD linked oxidase domain protein; FAD linked oxidase domain-containing protein 2582064 5080214 Sputcn32_2242 Shewanella putrefaciens CN-32 FAD linked oxidase domain-containing protein YP_001183762.1 2579023 R 319224 CDS YP_001183763.1 146293339 5080215 complement(2582162..2584531) 1 NC_009438.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2584531 5080215 Sputcn32_2243 Shewanella putrefaciens CN-32 phosphoenolpyruvate synthase YP_001183763.1 2582162 R 319224 CDS YP_001183764.1 146293340 5080216 2584656..2585468 1 NC_009438.1 PFAM: protein of unknown function DUF299; KEGG: shm:Shewmr7_1666 protein of unknown function DUF299; hypothetical protein 2585468 5080216 Sputcn32_2244 Shewanella putrefaciens CN-32 hypothetical protein YP_001183764.1 2584656 D 319224 CDS YP_001183765.1 146293341 5080217 2585651..2586724 1 NC_009438.1 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 2586724 5080217 Sputcn32_2245 Shewanella putrefaciens CN-32 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001183765.1 2585651 D 319224 CDS YP_001183766.1 146293342 5080218 2586879..2587310 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_1664 thioesterase superfamily protein; thioesterase superfamily protein 2587310 5080218 Sputcn32_2246 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001183766.1 2586879 D 319224 CDS YP_001183767.1 146293343 5080219 2587532..2588194 1 NC_009438.1 PFAM: regulatory protein, LuxR; response regulator receiver; Sigma-70, region 4 type 2; KEGG: she:Shewmr4_1588 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2588194 5080219 Sputcn32_2247 Shewanella putrefaciens CN-32 two component LuxR family transcriptional regulator YP_001183767.1 2587532 D 319224 CDS YP_001183768.1 146293344 5080220 complement(2588277..2589254) 1 NC_009438.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2589254 cysB 5080220 cysB Shewanella putrefaciens CN-32 transcriptional regulator CysB YP_001183768.1 2588277 R 319224 CDS YP_001183769.1 146293345 5080221 2589483..2590262 1 NC_009438.1 KEGG: she:Shewmr4_1586 hypothetical protein; hypothetical protein 2590262 5080221 Sputcn32_2249 Shewanella putrefaciens CN-32 hypothetical protein YP_001183769.1 2589483 D 319224 CDS YP_001183770.1 146293346 5080222 complement(2590448..2593090) 1 NC_009438.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2593090 5080222 Sputcn32_2250 Shewanella putrefaciens CN-32 DNA topoisomerase I YP_001183770.1 2590448 R 319224 CDS YP_001183771.1 146293347 5080223 2593419..2594753 1 NC_009438.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; succinylarginine dihydrolase 2594753 5080223 Sputcn32_2251 Shewanella putrefaciens CN-32 succinylarginine dihydrolase YP_001183771.1 2593419 D 319224 CDS YP_001183772.1 146293348 5080224 complement(2594815..2597370) 1 NC_009438.1 PFAM: Ig domain protein, group 1 domain protein; KEGG: sdn:Sden_2330 Ig-like, group 1; Ig domain-containing protein 2597370 5080224 Sputcn32_2252 Shewanella putrefaciens CN-32 Ig domain-containing protein YP_001183772.1 2594815 R 319224 CDS YP_001183773.1 146293349 5080225 2597587..2598912 1 NC_009438.1 PFAM: sodium:dicarboxylate symporter; KEGG: she:Shewmr4_1582 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2598912 5080225 Sputcn32_2253 Shewanella putrefaciens CN-32 sodium:dicarboxylate symporter YP_001183773.1 2597587 D 319224 CDS YP_001183774.1 146293350 5080226 2599080..2599439 1 NC_009438.1 KEGG: she:Shewmr4_1581 hypothetical protein; hypothetical protein 2599439 5080226 Sputcn32_2254 Shewanella putrefaciens CN-32 hypothetical protein YP_001183774.1 2599080 D 319224 CDS YP_001183775.1 146293351 5080227 2599610..2600284 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: shm:Shewmr7_1655 two component transcriptional regulator, winged helix family; two component transcriptional regulator 2600284 5080227 Sputcn32_2255 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001183775.1 2599610 D 319224 CDS YP_001183776.1 146293352 5080228 2600275..2601624 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO1945 sensor protein PhoQ; integral membrane sensor signal transduction histidine kinase 2601624 5080228 Sputcn32_2256 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001183776.1 2600275 D 319224 CDS YP_001183777.1 146293353 5080229 complement(2601641..2602336) 1 NC_009438.1 SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: son:SO1944 hypothetical protein; prolyl 4-hydroxylase subunit alpha 2602336 5080229 Sputcn32_2257 Shewanella putrefaciens CN-32 prolyl 4-hydroxylase subunit alpha YP_001183777.1 2601641 R 319224 CDS YP_001183778.1 146293354 5080230 2602452..2603714 1 NC_009438.1 KEGG: son:SO1942 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; metal dependent phosphohydrolase 2603714 5080230 Sputcn32_2258 Shewanella putrefaciens CN-32 metal dependent phosphohydrolase YP_001183778.1 2602452 D 319224 CDS YP_001183779.1 146293355 5080231 complement(2603774..2604721) 1 NC_009438.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA family protein; KEGG: shm:Shewmr7_1720 magnesium and cobalt transport protein CorA; magnesium and cobalt transport protein CorA 2604721 5080231 Sputcn32_2259 Shewanella putrefaciens CN-32 magnesium and cobalt transport protein CorA YP_001183779.1 2603774 R 319224 CDS YP_001183780.1 146293356 5080232 complement(2604848..2605249) 1 NC_009438.1 KEGG: son:SO1940 hypothetical protein; hypothetical protein 2605249 5080232 Sputcn32_2260 Shewanella putrefaciens CN-32 hypothetical protein YP_001183780.1 2604848 R 319224 CDS YP_001183781.1 146293357 5080233 complement(2605367..2605816) 1 NC_009438.1 KEGG: she:Shewmr4_1643 hypothetical protein; hypothetical protein 2605816 5080233 Sputcn32_2261 Shewanella putrefaciens CN-32 hypothetical protein YP_001183781.1 2605367 R 319224 CDS YP_001183782.1 146293358 5080234 complement(2605813..2606547) 1 NC_009438.1 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2606547 5080234 Sputcn32_2262 Shewanella putrefaciens CN-32 NAD-dependent deacetylase YP_001183782.1 2605813 R 319224 CDS YP_001183783.1 146293359 5080235 2606804..2607235 1 NC_009438.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 2607235 fur 5080235 fur Shewanella putrefaciens CN-32 ferric uptake regulator YP_001183783.1 2606804 D 319224 CDS YP_001183784.1 146293360 5080236 complement(2607331..2607828) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1936 acetyltransferase, GNAT family; N-acetyltransferase GCN5 2607828 5080236 Sputcn32_2264 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001183784.1 2607331 R 319224 CDS YP_001183785.1 146293361 5080237 complement(2607894..2608301) 1 NC_009438.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: shm:Shewmr7_1714 GreA/GreB family elongation factor; GreA/GreB family elongation factor 2608301 5080237 Sputcn32_2265 Shewanella putrefaciens CN-32 GreA/GreB family elongation factor YP_001183785.1 2607894 R 319224 CDS YP_001183786.1 146293362 5080238 complement(2608703..2609575) 1 NC_009438.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: son:SO1933 succinyl-CoA synthetase alpha chain; succinyl-CoA synthetase subunit alpha 2609575 5080238 Sputcn32_2266 Shewanella putrefaciens CN-32 succinyl-CoA synthetase subunit alpha YP_001183786.1 2608703 R 319224 CDS YP_001183787.1 146293363 5080239 complement(2609575..2610741) 1 NC_009438.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 2610741 sucC 5080239 sucC Shewanella putrefaciens CN-32 succinyl-CoA synthetase subunit beta YP_001183787.1 2609575 R 319224 CDS YP_001183788.1 146293364 5080240 complement(2610819..2612021) 1 NC_009438.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: she:Shewmr4_1636 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 2612021 5080240 Sputcn32_2268 Shewanella putrefaciens CN-32 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001183788.1 2610819 R 319224 CDS YP_001183789.1 146293365 5080241 complement(2612053..2614872) 1 NC_009438.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 2614872 sucA 5080241 sucA Shewanella putrefaciens CN-32 2-oxoglutarate dehydrogenase E1 component YP_001183789.1 2612053 R 319224 CDS YP_001183790.1 146293366 5080242 complement(2615088..2615795) 1 NC_009438.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 2615795 sdhB 5080242 sdhB Shewanella putrefaciens CN-32 succinate dehydrogenase iron-sulfur subunit YP_001183790.1 2615088 R 319224 CDS YP_001183791.1 146293367 5080243 complement(2615807..2617573) 1 NC_009438.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 2617573 sdhA 5080243 sdhA Shewanella putrefaciens CN-32 succinate dehydrogenase flavoprotein subunit YP_001183791.1 2615807 R 319224 CDS YP_001183792.1 146293368 5080244 complement(2617574..2617921) 1 NC_009438.1 KEGG: she:Shewmr4_1632 conserved hypothetical succinate dehydrogenase, hydrophobic subunit; putative succinate dehydrogenase, hydrophobic subunit 2617921 5080244 Sputcn32_2272 Shewanella putrefaciens CN-32 putative succinate dehydrogenase, hydrophobic subunit YP_001183792.1 2617574 R 319224 CDS YP_001183793.1 146293369 5080245 complement(2617915..2618310) 1 NC_009438.1 PFAM: succinate dehydrogenase, cytochrome b subunit; KEGG: shm:Shewmr7_1706 succinate dehydrogenase, cytochrome b subunit; succinate dehydrogenase, cytochrome subunit B 2618310 5080245 Sputcn32_2273 Shewanella putrefaciens CN-32 succinate dehydrogenase, cytochrome subunit B YP_001183793.1 2617915 R 319224 CDS YP_001183794.1 146293370 5080246 2618727..2620013 1 NC_009438.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2620013 gltA 5080246 gltA Shewanella putrefaciens CN-32 type II citrate synthase YP_001183794.1 2618727 D 319224 CDS YP_001183795.1 146293371 5080247 2620337..2621401 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO1925 HlyD family secretion protein; RND family efflux transporter MFP subunit 2621401 5080247 Sputcn32_2275 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001183795.1 2620337 D 319224 CDS YP_001183796.1 146293372 5080248 2621415..2624666 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: she:Shewmr4_1628 acriflavin resistance protein; acriflavin resistance protein 2624666 5080248 Sputcn32_2276 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001183796.1 2621415 D 319224 CDS YP_001183797.1 146293373 5080249 2624663..2627710 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: she:Shewmr4_1627 acriflavin resistance protein; acriflavin resistance protein 2627710 5080249 Sputcn32_2277 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001183797.1 2624663 D 319224 CDS YP_001183798.1 146293374 5080250 complement(2627791..2628102) 1 NC_009438.1 PFAM: Uncharacterized conserved protein UCP029143; KEGG: she:Shewmr4_1625 uncharacterized conserved protein UCP029143; hypothetical protein 2628102 5080250 Sputcn32_2278 Shewanella putrefaciens CN-32 hypothetical protein YP_001183798.1 2627791 R 319224 CDS YP_001183799.1 146293375 5080251 2628423..2628620 1 NC_009438.1 KEGG: son:SO1921 hypothetical protein; hypothetical protein 2628620 5080251 Sputcn32_2279 Shewanella putrefaciens CN-32 hypothetical protein YP_001183799.1 2628423 D 319224 CDS YP_001183800.1 146293376 5080252 complement(2628715..2630310) 1 NC_009438.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: she:Shewmr4_1623 MATE efflux family protein; MATE efflux family protein 2630310 5080252 Sputcn32_2280 Shewanella putrefaciens CN-32 MATE efflux family protein YP_001183800.1 2628715 R 319224 CDS YP_001183801.1 146293377 5080253 complement(2630353..2631222) 1 NC_009438.1 PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: she:Shewmr4_2209 ion transport protein; Ion transport protein 2631222 5080253 Sputcn32_2281 Shewanella putrefaciens CN-32 Ion transport protein YP_001183801.1 2630353 R 319224 CDS YP_001183802.1 146293378 5080254 2631396..2631911 1 NC_009438.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: shm:Shewmr7_2287 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 2631911 5080254 Sputcn32_2282 Shewanella putrefaciens CN-32 ErfK/YbiS/YcfS/YnhG family protein YP_001183802.1 2631396 D 319224 CDS YP_001183803.1 146293379 5080255 2632083..2632748 1 NC_009438.1 PFAM: protein of unknown function DUF991; KEGG: son:SO2182 hypothetical protein; hypothetical protein 2632748 5080255 Sputcn32_2283 Shewanella putrefaciens CN-32 hypothetical protein YP_001183803.1 2632083 D 319224 CDS YP_001183804.1 146293380 5080256 2632826..2633086 1 NC_009438.1 KEGG: shm:Shewmr7_2289 hypothetical protein; hypothetical protein 2633086 5080256 Sputcn32_2284 Shewanella putrefaciens CN-32 hypothetical protein YP_001183804.1 2632826 D 319224 CDS YP_001183805.1 146293381 5080257 complement(2633194..2634135) 1 NC_009438.1 PFAM: peptidase M23B; KEGG: son:SO2180 peptidase, M23/M37 family; peptidase M23B 2634135 5080257 Sputcn32_2285 Shewanella putrefaciens CN-32 peptidase M23B YP_001183805.1 2633194 R 319224 CDS YP_001183806.1 146293382 5080258 complement(2634193..2635074) 1 NC_009438.1 KEGG: shm:Shewmr7_2291 hypothetical protein; hypothetical protein 2635074 5080258 Sputcn32_2286 Shewanella putrefaciens CN-32 hypothetical protein YP_001183806.1 2634193 R 319224 CDS YP_001183807.1 146293383 5080259 2635575..2636576 1 NC_009438.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: son:SO2178 cytochrome c551 peroxidase; cytochrome-c peroxidase 2636576 5080259 Sputcn32_2287 Shewanella putrefaciens CN-32 cytochrome-c peroxidase YP_001183807.1 2635575 D 319224 CDS YP_001183808.1 146293384 5080260 complement(2636666..2637694) 1 NC_009438.1 PFAM: 37kDa nucleoid-associated protein; KEGG: son:SO2177 hypothetical protein; nucleoid-associated protein NdpA 2637694 5080260 Sputcn32_2288 Shewanella putrefaciens CN-32 nucleoid-associated protein NdpA YP_001183808.1 2636666 R 319224 CDS YP_001183809.2 162139379 5080261 2637772..2637990 1 NC_009438.1 PFAM: protein of unknown function DUF1414; KEGG: shm:Shewmr7_2294 protein of unknown function DUF1414; hypothetical protein 2637990 5080261 Sputcn32_2289 Shewanella putrefaciens CN-32 hypothetical protein YP_001183809.2 2637772 D 319224 CDS YP_001183810.1 146293386 5080262 2638054..2639832 1 NC_009438.1 PFAM: sulfatase; KEGG: she:Shewmr4_2219 sulfatase; sulfatase 2639832 5080262 Sputcn32_2290 Shewanella putrefaciens CN-32 sulfatase YP_001183810.1 2638054 D 319224 CDS YP_001183811.1 146293387 5080263 complement(2639917..2641023) 1 NC_009438.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: shm:Shewmr7_2296 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 2641023 5080263 Sputcn32_2291 Shewanella putrefaciens CN-32 NADH:flavin oxidoreductase YP_001183811.1 2639917 R 319224 CDS YP_001183812.1 146293388 5080264 2641136..2642002 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_2297 transcriptional regulator, LysR family; LysR family transcriptional regulator 2642002 5080264 Sputcn32_2292 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183812.1 2641136 D 319224 CDS YP_001183813.1 146293389 5080266 2642563..2643054 1 NC_009438.1 KEGG: shm:Shewmr7_2317 hypothetical protein; hypothetical protein 2643054 5080266 Sputcn32_2293 Shewanella putrefaciens CN-32 hypothetical protein YP_001183813.1 2642563 D 319224 CDS YP_001183814.1 146293390 5080267 complement(2643132..2643962) 1 NC_009438.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2643962 nadE 5080267 nadE Shewanella putrefaciens CN-32 NAD synthetase YP_001183814.1 2643132 R 319224 CDS YP_001183815.1 146293391 5080268 complement(2644169..2645473) 1 NC_009438.1 PFAM: PfkB domain protein; KEGG: son:SO2020 inosine-guanosine kinase; inosine kinase 2645473 5080268 Sputcn32_2295 Shewanella putrefaciens CN-32 inosine kinase YP_001183815.1 2644169 R 319224 CDS YP_001183816.1 146293392 5080269 complement(2645718..2646761) 1 NC_009438.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 2646761 hemH 5080269 hemH Shewanella putrefaciens CN-32 ferrochelatase YP_001183816.1 2645718 R 319224 CDS YP_001183817.1 146293393 5080270 complement(2646842..2647486) 1 NC_009438.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2647486 adk 5080270 adk Shewanella putrefaciens CN-32 adenylate kinase YP_001183817.1 2646842 R 319224 CDS YP_001183818.1 146293394 5080271 complement(2647628..2648491) 1 NC_009438.1 PFAM: Thioredoxin domain; KEGG: she:Shewmr4_2250 thioredoxin domain; thioredoxin domain-containing protein 2648491 5080271 Sputcn32_2298 Shewanella putrefaciens CN-32 thioredoxin domain-containing protein YP_001183818.1 2647628 R 319224 CDS YP_001183819.1 146293395 5080272 complement(2648736..2650649) 1 NC_009438.1 molecular chaperone; heat shock protein 90 2650649 5080272 Sputcn32_2299 Shewanella putrefaciens CN-32 heat shock protein 90 YP_001183819.1 2648736 R 319224 CDS YP_001183820.1 146293396 5080273 complement(2650935..2651534) 1 NC_009438.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 2651534 recR 5080273 recR Shewanella putrefaciens CN-32 recombination protein RecR YP_001183820.1 2650935 R 319224 CDS YP_001183821.1 146293397 5080274 complement(2651547..2651876) 1 NC_009438.1 PFAM: conserved hypothetical protein 103; KEGG: she:Shewmr4_2253 conserved hypothetical protein 103; hypothetical protein 2651876 5080274 Sputcn32_2301 Shewanella putrefaciens CN-32 hypothetical protein YP_001183821.1 2651547 R 319224 CDS YP_001183822.1 146293398 5080275 complement(2652046..2654919) 1 NC_009438.1 KEGG: son:SO2013 DNA polymerase III, gamma and tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase, central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 2654919 5080275 Sputcn32_2302 Shewanella putrefaciens CN-32 DNA polymerase III subunits gamma and tau YP_001183822.1 2652046 R 319224 CDS YP_001183823.1 146293399 5080276 complement(2655038..2655592) 1 NC_009438.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2655592 5080276 Sputcn32_2303 Shewanella putrefaciens CN-32 adenine phosphoribosyltransferase YP_001183823.1 2655038 R 319224 CDS YP_001183824.1 146293400 5080277 complement(2655822..2656187) 1 NC_009438.1 PFAM: protein of unknown function DUF454; KEGG: she:Shewmr4_2256 protein of unknown function DUF454; hypothetical protein 2656187 5080277 Sputcn32_2304 Shewanella putrefaciens CN-32 hypothetical protein YP_001183824.1 2655822 R 319224 CDS YP_001183825.1 146293401 5080278 complement(2656269..2656391) 1 NC_009438.1 KEGG: shm:Shewmr7_2329 hypothetical protein; hypothetical protein 2656391 5080278 Sputcn32_2305 Shewanella putrefaciens CN-32 hypothetical protein YP_001183825.1 2656269 R 319224 CDS YP_001183826.1 146293402 5080279 complement(2656540..2657286) 1 NC_009438.1 KEGG: she:Shewmr4_2258 hypothetical protein; hypothetical protein 2657286 5080279 Sputcn32_2306 Shewanella putrefaciens CN-32 hypothetical protein YP_001183826.1 2656540 R 319224 CDS YP_001183827.1 146293403 5080280 complement(2657286..2658188) 1 NC_009438.1 PFAM: protein of unknown function DUF692; KEGG: son:SO2008 hypothetical protein; hypothetical protein 2658188 5080280 Sputcn32_2307 Shewanella putrefaciens CN-32 hypothetical protein YP_001183827.1 2657286 R 319224 CDS YP_001183828.1 146293404 5080281 complement(2658268..2658678) 1 NC_009438.1 KEGG: shm:Shewmr7_2332 hypothetical protein; hypothetical protein 2658678 5080281 Sputcn32_2308 Shewanella putrefaciens CN-32 hypothetical protein YP_001183828.1 2658268 R 319224 CDS YP_001183829.1 146293405 5080282 2658923..2659876 1 NC_009438.1 PFAM: dihydrouridine synthase, DuS; KEGG: shm:Shewmr7_2333 dihydrouridine synthase, DuS; dihydrouridine synthase, DuS 2659876 5080282 Sputcn32_2309 Shewanella putrefaciens CN-32 dihydrouridine synthase, DuS YP_001183829.1 2658923 D 319224 CDS YP_001183830.1 146293406 5080283 2660080..2660439 1 NC_009438.1 KEGG: shm:Shewmr7_2334 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 2660439 5080283 Sputcn32_2310 Shewanella putrefaciens CN-32 TraR/DksA family transcriptional regulator YP_001183830.1 2660080 D 319224 CDS YP_001183831.1 146293407 5080284 complement(2660672..2662390) 1 NC_009438.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 2662390 ushA 5080284 ushA Shewanella putrefaciens CN-32 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_001183831.1 2660672 R 319224 CDS YP_001183832.1 146293408 5080285 complement(2662755..2663426) 1 NC_009438.1 PFAM: phospholipase/Carboxylesterase; KEGG: son:SO1999 phospholipase/carboxylesterase family protein; carboxylesterase 2663426 5080285 Sputcn32_2312 Shewanella putrefaciens CN-32 carboxylesterase YP_001183832.1 2662755 R 319224 CDS YP_001183833.1 146293409 5080286 complement(2663515..2663742) 1 NC_009438.1 KEGG: shm:Shewmr7_2338 hypothetical protein; hypothetical protein 2663742 5080286 Sputcn32_2313 Shewanella putrefaciens CN-32 hypothetical protein YP_001183833.1 2663515 R 319224 CDS YP_001183834.1 146293410 5080287 2663994..2665952 1 NC_009438.1 PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: shm:Shewmr7_2339 peptidase M1, membrane alanine aminopeptidase; peptidase M1, membrane alanine aminopeptidase 2665952 5080287 Sputcn32_2314 Shewanella putrefaciens CN-32 peptidase M1, membrane alanine aminopeptidase YP_001183834.1 2663994 D 319224 CDS YP_001183835.1 146293411 5080288 complement(2666072..2666563) 1 NC_009438.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO1995 peptidyl-prolyl cis-trans isomerase, FkbP family; peptidylprolyl isomerase, FKBP-type 2666563 5080288 Sputcn32_2315 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001183835.1 2666072 R 319224 CDS YP_001183836.1 146293412 5080289 complement(2666670..2667989) 1 NC_009438.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: she:Shewmr4_2269 lytic murein transglycosylase; lytic murein transglycosylase 2667989 5080289 Sputcn32_2316 Shewanella putrefaciens CN-32 lytic murein transglycosylase YP_001183836.1 2666670 R 319224 CDS YP_001183837.1 146293413 5080290 2668196..2668555 1 NC_009438.1 KEGG: shm:Shewmr7_2342 hypothetical protein; hypothetical protein 2668555 5080290 Sputcn32_2317 Shewanella putrefaciens CN-32 hypothetical protein YP_001183837.1 2668196 D 319224 CDS YP_001183838.1 146293414 5080291 2668607..2669245 1 NC_009438.1 KEGG: shm:Shewmr7_2343 hypothetical protein; hypothetical protein 2669245 5080291 Sputcn32_2318 Shewanella putrefaciens CN-32 hypothetical protein YP_001183838.1 2668607 D 319224 CDS YP_001183839.1 146293415 5080292 complement(2669340..2670284) 1 NC_009438.1 PFAM: response regulator receiver; CheW domain protein; KEGG: she:Shewmr4_2272 response regulator receiver modulated CheW protein; putative CheW protein 2670284 5080292 Sputcn32_2319 Shewanella putrefaciens CN-32 putative CheW protein YP_001183839.1 2669340 R 319224 CDS YP_001183840.1 146293416 5080293 complement(2670548..2671165) 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO1988 hypothetical methyltransferase; type 11 methyltransferase 2671165 5080293 Sputcn32_2320 Shewanella putrefaciens CN-32 type 11 methyltransferase YP_001183840.1 2670548 R 319224 CDS YP_001183841.1 146293417 5080294 2671262..2671813 1 NC_009438.1 PFAM: peptidase S16, lon domain protein; KEGG: shm:Shewmr7_2346 peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein 2671813 5080294 Sputcn32_2321 Shewanella putrefaciens CN-32 peptidase S16, lon domain-containing protein YP_001183841.1 2671262 D 319224 CDS YP_001183842.1 146293418 5080295 2671948..2672610 1 NC_009438.1 PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: son:SO1986 RNA polymerase sigma-70 factor, ECF subfamily; ECF subfamily RNA polymerase sigma-24 factor 2672610 5080295 Sputcn32_2322 Shewanella putrefaciens CN-32 ECF subfamily RNA polymerase sigma-24 factor YP_001183842.1 2671948 D 319224 CDS YP_001183843.1 146293419 5080296 2672603..2673310 1 NC_009438.1 TIGRFAM: anti-sigma factor, putative, ChrR family; KEGG: she:Shewmr4_2276 anti-ECFsigma factor, ChrR; anti-ECF sigma factor ChrR 2673310 5080296 Sputcn32_2323 Shewanella putrefaciens CN-32 anti-ECF sigma factor ChrR YP_001183843.1 2672603 D 319224 CDS YP_001183844.1 146293420 5080297 2673919..2674101 1 NC_009438.1 KEGG: shm:Shewmr7_2349 hypothetical protein; hypothetical protein 2674101 5080297 Sputcn32_2324 Shewanella putrefaciens CN-32 hypothetical protein YP_001183844.1 2673919 D 319224 CDS YP_001183845.1 146293421 5080298 2674402..2674662 1 NC_009438.1 KEGG: shm:Shewmr7_2350 hypothetical protein; hypothetical protein 2674662 5080298 Sputcn32_2325 Shewanella putrefaciens CN-32 hypothetical protein YP_001183845.1 2674402 D 319224 CDS YP_001183846.1 146293422 5080299 complement(2674820..2676292) 1 NC_009438.1 PFAM: Nicotinate phosphoribosyltransferase and related; KEGG: son:SO1981 hypothetical protein; putative nicotinate phosphoribosyltransferase 2676292 5080299 Sputcn32_2326 Shewanella putrefaciens CN-32 putative nicotinate phosphoribosyltransferase YP_001183846.1 2674820 R 319224 CDS YP_001183847.1 146293423 5080300 complement(2676303..2677190) 1 NC_009438.1 KEGG: son:SO1980 phosphoribosyl transferase domain protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2677190 5080300 Sputcn32_2327 Shewanella putrefaciens CN-32 ribose-phosphate pyrophosphokinase YP_001183847.1 2676303 R 319224 CDS YP_001183848.1 146293424 5080301 complement(2677546..2678259) 1 NC_009438.1 PFAM: NUDIX hydrolase; KEGG: son:SO1979 MutT/nudix family protein; NUDIX hydrolase 2678259 5080301 Sputcn32_2328 Shewanella putrefaciens CN-32 NUDIX hydrolase YP_001183848.1 2677546 R 319224 CDS YP_001183849.1 146293425 5080302 complement(2678341..2679369) 1 NC_009438.1 KEGG: son:SO1978 hypothetical protein; hypothetical protein 2679369 5080302 Sputcn32_2329 Shewanella putrefaciens CN-32 hypothetical protein YP_001183849.1 2678341 R 319224 CDS YP_001183850.1 146293426 5080353 2679637..2680044 1 NC_009438.1 PFAM: protein of unknown function DUF307; KEGG: son:SO1977 hypothetical protein; hypothetical protein 2680044 5080353 Sputcn32_2330 Shewanella putrefaciens CN-32 hypothetical protein YP_001183850.1 2679637 D 319224 CDS YP_001183851.1 146293427 5080354 complement(2680139..2680516) 1 NC_009438.1 KEGG: son:SO2890 hypothetical protein; hypothetical protein 2680516 5080354 Sputcn32_2331 Shewanella putrefaciens CN-32 hypothetical protein YP_001183851.1 2680139 R 319224 CDS YP_001183852.1 146293428 5080355 complement(2680680..2681315) 1 NC_009438.1 PFAM: regulatory protein, LuxR; KEGG: shm:Shewmr7_2386 transcriptional regulator, LuxR family; response regulator receiver protein 2681315 5080355 Sputcn32_2332 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001183852.1 2680680 R 319224 CDS YP_001183853.1 146293429 5080356 complement(2682053..2682403) 1 NC_009438.1 KEGG: shm:Shewmr7_2388 cytochrome c3; cytochrome c3 2682403 5080356 Sputcn32_2333 Shewanella putrefaciens CN-32 cytochrome c3 YP_001183853.1 2682053 R 319224 CDS YP_001183854.1 146293430 5080357 complement(2682806..2683669) 1 NC_009438.1 putative metalloprotease; heat shock protein HtpX 2683669 5080357 Sputcn32_2334 Shewanella putrefaciens CN-32 heat shock protein HtpX YP_001183854.1 2682806 R 319224 CDS YP_001183855.1 146293431 5080358 2683959..2684669 1 NC_009438.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 2684669 5080358 Sputcn32_2335 Shewanella putrefaciens CN-32 peptidase E YP_001183855.1 2683959 D 319224 CDS YP_001183856.1 146293432 5080359 2685026..2686615 1 NC_009438.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2686615 mdoG 5080359 mdoG Shewanella putrefaciens CN-32 glucan biosynthesis protein G YP_001183856.1 2685026 D 319224 CDS YP_001183857.1 146293433 5080360 2687240..2688208 1 NC_009438.1 KEGG: shm:Shewmr7_2427 hypothetical protein; hypothetical protein 2688208 5080360 Sputcn32_2337 Shewanella putrefaciens CN-32 hypothetical protein YP_001183857.1 2687240 D 319224 CDS YP_001183858.1 146293434 5080361 2688547..2689161 1 NC_009438.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mka:MK0066 biopolymer transport protein; MotA/TolQ/ExbB proton channel 2689161 5080361 Sputcn32_2338 Shewanella putrefaciens CN-32 MotA/TolQ/ExbB proton channel YP_001183858.1 2688547 D 319224 CDS YP_001183859.1 146293435 5080362 2689158..2689496 1 NC_009438.1 KEGG: mbu:Mbur_2259 hypothetical protein; hypothetical protein 2689496 5080362 Sputcn32_2339 Shewanella putrefaciens CN-32 hypothetical protein YP_001183859.1 2689158 D 319224 CDS YP_001183860.1 146293436 5080363 2689483..2693439 1 NC_009438.1 PFAM: CobN/magnesium chelatase; KEGG: mba:Mbar_A3731 cobalamin biosynthesis protein N; cobaltochelatase 2693439 5080363 Sputcn32_2340 Shewanella putrefaciens CN-32 cobaltochelatase YP_001183860.1 2689483 D 319224 CDS YP_001183861.1 146293437 5080364 2693457..2695751 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: dar:Daro_4029 TonB-dependent receptor; TonB-dependent receptor 2695751 5080364 Sputcn32_2341 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183861.1 2693457 D 319224 CDS YP_001183862.1 146293438 5080365 complement(2695851..2696594) 1 NC_009438.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2696594 bioD 5080365 bioD Shewanella putrefaciens CN-32 dithiobiotin synthetase YP_001183862.1 2695851 R 319224 CDS YP_001183863.1 146293439 5080366 complement(2696634..2697443) 1 NC_009438.1 TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: she:Shewmr4_2357 biotin biosynthesis protein BioC; biotin biosynthesis protein BioC 2697443 5080366 Sputcn32_2343 Shewanella putrefaciens CN-32 biotin biosynthesis protein BioC YP_001183863.1 2696634 R 319224 CDS YP_001183864.1 146293440 5080367 complement(2697582..2698793) 1 NC_009438.1 PFAM: aminotransferase, class I and II; aminotransferase class-III; KEGG: son:SO2739 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 2698793 5080367 Sputcn32_2344 Shewanella putrefaciens CN-32 8-amino-7-oxononanoate synthase YP_001183864.1 2697582 R 319224 CDS YP_001183865.1 146293441 5080368 complement(2698798..2699850) 1 NC_009438.1 KEGG: shm:Shewmr7_2431 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 2699850 5080368 Sputcn32_2345 Shewanella putrefaciens CN-32 biotin synthase YP_001183865.1 2698798 R 319224 CDS YP_001183866.1 146293442 5080369 2699974..2701314 1 NC_009438.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: son:SO2741 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2701314 5080369 Sputcn32_2346 Shewanella putrefaciens CN-32 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001183866.1 2699974 D 319224 CDS YP_001183867.1 146293443 5080370 2701548..2703149 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: vch:VC1248 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 2703149 5080370 Sputcn32_2347 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183867.1 2701548 D 319224 CDS YP_001183868.1 146293444 5080371 complement(2703205..2706642) 1 NC_009438.1 PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO2742 sensor histidine kinase/response regulator; integral membrane sensor hybrid histidine kinase 2706642 5080371 Sputcn32_2348 Shewanella putrefaciens CN-32 integral membrane sensor hybrid histidine kinase YP_001183868.1 2703205 R 319224 CDS YP_001183869.1 146293445 5080372 2706818..2708770 1 NC_009438.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 2708770 5080372 Sputcn32_2349 Shewanella putrefaciens CN-32 acetyl-CoA synthetase YP_001183869.1 2706818 D 319224 CDS YP_001183870.1 146293446 5080373 2708918..2710726 1 NC_009438.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: shm:Shewmr7_2435 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 2710726 5080373 Sputcn32_2350 Shewanella putrefaciens CN-32 type III restriction enzyme, res subunit YP_001183870.1 2708918 D 319224 CDS YP_001183871.1 146293447 5080374 2710787..2711047 1 NC_009438.1 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 2711047 grxA 5080374 grxA Shewanella putrefaciens CN-32 glutaredoxin YP_001183871.1 2710787 D 319224 CDS YP_001183872.1 146293448 5080375 2711228..2711326 1 NC_009438.1 KEGG: son:SO3573 hypothetical protein; hypothetical protein 2711326 5080375 Sputcn32_2352 Shewanella putrefaciens CN-32 hypothetical protein YP_001183872.1 2711228 D 319224 CDS YP_001183873.1 146293449 5080381 complement(2717503..2718054) 1 NC_009438.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 2718054 5080381 Sputcn32_2353 Shewanella putrefaciens CN-32 D,D-heptose 1,7-bisphosphate phosphatase YP_001183873.1 2717503 R 319224 CDS YP_001183874.1 146293450 5080382 2718359..2719060 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: she:Shewmr4_1521 transcriptional regulator, GntR family; GntR family transcriptional regulator 2719060 5080382 Sputcn32_2354 Shewanella putrefaciens CN-32 GntR family transcriptional regulator YP_001183874.1 2718359 D 319224 CDS YP_001183875.1 146293451 5080383 2719153..2720217 1 NC_009438.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; in Pseudomonas this protein is involved in quinolone signal biosynthesis; 3-oxoacyl-ACP synthase 2720217 5080383 Sputcn32_2355 Shewanella putrefaciens CN-32 3-oxoacyl-ACP synthase YP_001183875.1 2719153 D 319224 CDS YP_001183876.1 146293452 5080384 complement(2720415..2721086) 1 NC_009438.1 PFAM: Exonuclease, RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: she:Shewmr4_1516 exonuclease, RNase T and DNA polymerase III; exonuclease 2721086 5080384 Sputcn32_2356 Shewanella putrefaciens CN-32 exonuclease YP_001183876.1 2720415 R 319224 CDS YP_001183877.1 146293453 5080385 complement(2721102..2722949) 1 NC_009438.1 PFAM: cyclic nucleotide-binding; CBS domain containing protein; protein of unknown function DUF294, nucleotidyltransferase putative; KEGG: shm:Shewmr7_1582 cyclic nucleotide-binding protein; cyclic nucleotide-binding protein 2722949 5080385 Sputcn32_2357 Shewanella putrefaciens CN-32 cyclic nucleotide-binding protein YP_001183877.1 2721102 R 319224 CDS YP_001183878.1 146293454 5080386 complement(2723092..2724828) 1 NC_009438.1 PFAM: Na+/solute symporter; KEGG: shm:Shewmr7_1581 Na+/solute symporter; Na+/solute symporter 2724828 5080386 Sputcn32_2358 Shewanella putrefaciens CN-32 Na+/solute symporter YP_001183878.1 2723092 R 319224 CDS YP_001183879.1 146293455 5080387 complement(2724840..2725106) 1 NC_009438.1 KEGG: son:SO2858 hypothetical protein; hypothetical protein 2725106 5080387 Sputcn32_2359 Shewanella putrefaciens CN-32 hypothetical protein YP_001183879.1 2724840 R 319224 CDS YP_001183880.1 146293456 5080388 complement(2725722..2726345) 1 NC_009438.1 PFAM: DSBA oxidoreductase; KEGG: son:SO2860 thiol:disulfide interchange protein, DsbA family; DSBA oxidoreductase 2726345 5080388 Sputcn32_2360 Shewanella putrefaciens CN-32 DSBA oxidoreductase YP_001183880.1 2725722 R 319224 CDS YP_001183881.1 146293457 5080389 complement(2726459..2727319) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: shm:Shewmr7_1578 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 2727319 5080389 Sputcn32_2361 Shewanella putrefaciens CN-32 NAD-dependent epimerase/dehydratase YP_001183881.1 2726459 R 319224 CDS YP_001183882.1 146293458 5080390 complement(2727376..2728584) 1 NC_009438.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase, HD sub domain; KEGG: she:Shewmr4_1510 metal dependent phosphohydrolase; metal dependent phosphohydrolase 2728584 5080390 Sputcn32_2362 Shewanella putrefaciens CN-32 metal dependent phosphohydrolase YP_001183882.1 2727376 R 319224 CDS YP_001183883.1 146293459 5080391 complement(2728803..2729300) 1 NC_009438.1 KEGG: son:SO2863 hypothetical protein; hypothetical protein 2729300 5080391 Sputcn32_2363 Shewanella putrefaciens CN-32 hypothetical protein YP_001183883.1 2728803 R 319224 CDS YP_001183884.1 146293460 5080392 complement(2729465..2731522) 1 NC_009438.1 KEGG: son:SO2896 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger, NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase, OB-fold; NAD-dependent DNA ligase, adenylation; SMART: Helix-hairpin-helix DNA-binding, class 1; NAD-dependent DNA ligase-like; NAD-dependent DNA ligase 2731522 5080392 Sputcn32_2364 Shewanella putrefaciens CN-32 NAD-dependent DNA ligase YP_001183884.1 2729465 R 319224 CDS YP_001183885.1 146293461 5080393 complement(2731621..2732649) 1 NC_009438.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA, C-terminal FtsZ-binding region; KEGG: she:Shewmr4_1507 cell division protein ZipA; cell division protein ZipA 2732649 5080393 Sputcn32_2365 Shewanella putrefaciens CN-32 cell division protein ZipA YP_001183885.1 2731621 R 319224 CDS YP_001183886.1 146293462 5080394 complement(2732673..2736110) 1 NC_009438.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; KEGG: son:SO2898 SMC family protein; chromosome segregation protein SMC 2736110 5080394 Sputcn32_2366 Shewanella putrefaciens CN-32 chromosome segregation protein SMC YP_001183886.1 2732673 R 319224 CDS YP_001183887.1 146293463 5080395 2736308..2737087 1 NC_009438.1 putative role in sulfur assimilation; putative sulfate transport protein CysZ 2737087 5080395 Sputcn32_2367 Shewanella putrefaciens CN-32 putative sulfate transport protein CysZ YP_001183887.1 2736308 D 319224 CDS YP_001183888.1 146293464 5080396 complement(2737182..2738303) 1 NC_009438.1 catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2738303 5080396 Sputcn32_2368 Shewanella putrefaciens CN-32 3-oxoacyl-ACP synthase YP_001183888.1 2737182 R 319224 CDS YP_001183889.1 146293465 5080397 complement(2738300..2739496) 1 NC_009438.1 PFAM: RDD domain containing protein; KEGG: she:Shewmr4_1501 RDD domain containing protein; RDD domain-containing protein 2739496 5080397 Sputcn32_2369 Shewanella putrefaciens CN-32 RDD domain-containing protein YP_001183889.1 2738300 R 319224 CDS YP_001183890.1 146293466 5080398 2739748..2740716 1 NC_009438.1 TIGRFAM: cysteine synthases; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent enzyme, beta subunit; KEGG: son:SO2903 cysteine synthase A; cysteine synthase A 2740716 5080398 Sputcn32_2370 Shewanella putrefaciens CN-32 cysteine synthase A YP_001183890.1 2739748 D 319224 CDS YP_001183891.1 146293467 5080399 2740915..2741994 1 NC_009438.1 PFAM: O-methyltransferase, family 2; KEGG: shm:Shewmr7_1566 methyltransferase type 12; O-methyltransferase family protein 2741994 5080399 Sputcn32_2371 Shewanella putrefaciens CN-32 O-methyltransferase family protein YP_001183891.1 2740915 D 319224 CDS YP_001183892.1 146293468 5080450 2742126..2743130 1 NC_009438.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: son:SO2906 hypothetical protein; C4-dicarboxylate transporter/malic acid transport protein 2743130 5080450 Sputcn32_2372 Shewanella putrefaciens CN-32 C4-dicarboxylate transporter/malic acid transport protein YP_001183892.1 2742126 D 319224 CDS YP_001183893.1 146293469 5080451 2743830..2746730 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: sfr:Sfri_2471 TonB-dependent receptor; TonB-dependent receptor 2746730 5080451 Sputcn32_2373 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001183893.1 2743830 D 319224 CDS YP_001183894.1 146293470 5080452 complement(2746853..2748331) 1 NC_009438.1 PFAM: C4-dicarboxylate anaerobic carrier; KEGG: shm:Shewmr7_1563 C4-dicarboxylate anaerobic carrier; hypothetical protein 2748331 5080452 Sputcn32_2374 Shewanella putrefaciens CN-32 hypothetical protein YP_001183894.1 2746853 R 319224 CDS YP_001183895.1 146293471 5080453 2748762..2749673 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: sfr:Sfri_2469 transcriptional regulator, LysR family protein; LysR family transcriptional regulator 2749673 5080453 Sputcn32_2375 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001183895.1 2748762 D 319224 CDS YP_001183896.1 146293472 5080454 complement(2749753..2751366) 1 NC_009438.1 PFAM: formate/nitrite transporter; CBS domain containing protein; KEGG: sfr:Sfri_2470 formate/nitrite transporter; formate/nitrite transporter 2751366 5080454 Sputcn32_2376 Shewanella putrefaciens CN-32 formate/nitrite transporter YP_001183896.1 2749753 R 319224 CDS YP_001183897.1 146293473 5080455 2752283..2753815 1 NC_009438.1 KEGG: sfr:Sfri_2472 hypothetical protein; hypothetical protein 2753815 5080455 Sputcn32_2377 Shewanella putrefaciens CN-32 hypothetical protein YP_001183897.1 2752283 D 319224 CDS YP_001183898.1 146293474 5080456 2754460..2756742 1 NC_009438.1 KEGG: son:SO2912 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase, PFL; formate acetyltransferase 2756742 5080456 Sputcn32_2378 Shewanella putrefaciens CN-32 formate acetyltransferase YP_001183898.1 2754460 D 319224 CDS YP_001183899.1 146293475 5080457 2756806..2757546 1 NC_009438.1 activates pyruvate formate-lyase 1 under anaerobic conditions; pyruvate formate lyase-activating enzyme 1 2757546 pflA 5080457 pflA Shewanella putrefaciens CN-32 pyruvate formate lyase-activating enzyme 1 YP_001183899.1 2756806 D 319224 CDS YP_001183900.1 146293476 5080458 complement(2757591..2758073) 1 NC_009438.1 PFAM: protein of unknown function DUF412; KEGG: shm:Shewmr7_1559 protein of unknown function DUF412; hypothetical protein 2758073 5080458 Sputcn32_2380 Shewanella putrefaciens CN-32 hypothetical protein YP_001183900.1 2757591 R 319224 CDS YP_001183901.1 146293477 5080459 2758175..2759377 1 NC_009438.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 2759377 5080459 Sputcn32_2381 Shewanella putrefaciens CN-32 acetate kinase YP_001183901.1 2758175 D 319224 CDS YP_001183902.1 146293478 5080460 2759496..2761649 1 NC_009438.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 2761649 5080460 Sputcn32_2382 Shewanella putrefaciens CN-32 phosphate acetyltransferase YP_001183902.1 2759496 D 319224 CDS YP_001183903.1 146293479 5080461 2762132..2762560 1 NC_009438.1 KEGG: son:SO2917 hypothetical protein; hypothetical protein 2762560 5080461 Sputcn32_2383 Shewanella putrefaciens CN-32 hypothetical protein YP_001183903.1 2762132 D 319224 CDS YP_001183904.1 146293480 5080462 complement(2762684..2762887) 1 NC_009438.1 KEGG: shm:Shewmr7_1553 hypothetical protein; hypothetical protein 2762887 5080462 Sputcn32_2384 Shewanella putrefaciens CN-32 hypothetical protein YP_001183904.1 2762684 R 319224 CDS YP_001183905.1 146293481 5080463 complement(2762993..2763907) 1 NC_009438.1 KEGG: son:SO2919 hypothetical protein; hypothetical protein 2763907 5080463 Sputcn32_2385 Shewanella putrefaciens CN-32 hypothetical protein YP_001183905.1 2762993 R 319224 CDS YP_001183906.1 146293482 5080464 complement(2763915..2765021) 1 NC_009438.1 PFAM: protein of unknown function UPF0118; KEGG: shm:Shewmr7_1550 protein of unknown function UPF0118; hypothetical protein 2765021 5080464 Sputcn32_2386 Shewanella putrefaciens CN-32 hypothetical protein YP_001183906.1 2763915 R 319224 CDS YP_001183907.1 146293483 5080465 2765119..2765490 1 NC_009438.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2765490 folX 5080465 folX Shewanella putrefaciens CN-32 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_001183907.1 2765119 D 319224 CDS YP_001183908.1 146293484 5080466 2765585..2766478 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; domain of unknown function DUF1731; KEGG: shm:Shewmr7_1548 hypothetical protein; hypothetical protein 2766478 5080466 Sputcn32_2388 Shewanella putrefaciens CN-32 hypothetical protein YP_001183908.1 2765585 D 319224 CDS YP_001183909.1 146293485 5080467 2766994..2768217 1 NC_009438.1 PFAM: sodium/glutamate symporter; KEGG: son:SO2923 sodium/glutamate symporter; sodium/glutamate symporter 2768217 5080467 Sputcn32_2389 Shewanella putrefaciens CN-32 sodium/glutamate symporter YP_001183909.1 2766994 D 319224 CDS YP_001183910.1 146293486 5080468 complement(2768276..2770771) 1 NC_009438.1 PFAM: protein of unknown function DUF214; KEGG: son:SO2926 ABC transporter, permease, putative; hypothetical protein 2770771 5080468 Sputcn32_2390 Shewanella putrefaciens CN-32 hypothetical protein YP_001183910.1 2768276 R 319224 CDS YP_001183911.1 146293487 5080469 complement(2770774..2771529) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: she:Shewmr4_1479 ABC transporter related; ABC transporter-like protein 2771529 5080469 Sputcn32_2391 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001183911.1 2770774 R 319224 CDS YP_001183912.1 146293488 5080470 2771582..2772181 1 NC_009438.1 PFAM: lipolytic enzyme, G-D-S-L family; KEGG: she:Shewmr4_1478 arylesterase; arylesterase 2772181 5080470 Sputcn32_2392 Shewanella putrefaciens CN-32 arylesterase YP_001183912.1 2771582 D 319224 CDS YP_001183913.1 146293489 5080471 2772327..2773394 1 NC_009438.1 KEGG: shm:Shewmr7_1542 hypothetical protein; hypothetical protein 2773394 5080471 Sputcn32_2393 Shewanella putrefaciens CN-32 hypothetical protein YP_001183913.1 2772327 D 319224 CDS YP_001183914.1 146293490 5080472 complement(2773488..2774504) 1 NC_009438.1 SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 2774504 5080472 Sputcn32_2394 Shewanella putrefaciens CN-32 putative periplasmic protease YP_001183914.1 2773488 R 319224 CDS YP_001183915.1 146293491 5080473 complement(2774628..2777102) 1 NC_009438.1 KEGG: she:Shewmr4_1469 hypothetical protein; hypothetical protein 2777102 5080473 Sputcn32_2395 Shewanella putrefaciens CN-32 hypothetical protein YP_001183915.1 2774628 R 319224 CDS YP_001183916.1 146293492 5080474 2777364..2778101 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: shm:Shewmr7_1534 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 2778101 5080474 Sputcn32_2396 Shewanella putrefaciens CN-32 short chain dehydrogenase YP_001183916.1 2777364 D 319224 CDS YP_001183917.1 146293493 5080475 complement(2778149..2779123) 1 NC_009438.1 KEGG: son:SO2936 hypothetical protein; hypothetical protein 2779123 5080475 Sputcn32_2397 Shewanella putrefaciens CN-32 hypothetical protein YP_001183917.1 2778149 R 319224 CDS YP_001183918.1 146293494 5080476 complement(2779224..2780099) 1 NC_009438.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: shm:Shewmr7_1533 pseudouridine synthase, Rsu; pseudouridine synthase 2780099 5080476 Sputcn32_2398 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001183918.1 2779224 R 319224 CDS YP_001183919.1 146293495 5080477 complement(2780092..2780688) 1 NC_009438.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: shm:Shewmr7_1532 putative transcriptional regulator; putative transcriptional regulator 2780688 5080477 Sputcn32_2399 Shewanella putrefaciens CN-32 putative transcriptional regulator YP_001183919.1 2780092 R 319224 CDS YP_001183920.1 146293496 5080478 complement(2780692..2781480) 1 NC_009438.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: son:SO3015 putative segregation and condensation protein A; chromosome segregation and condensation protein ScpA 2781480 5080478 Sputcn32_2400 Shewanella putrefaciens CN-32 chromosome segregation and condensation protein ScpA YP_001183920.1 2780692 R 319224 CDS YP_001183921.1 146293497 5080479 complement(2781639..2782259) 1 NC_009438.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC, N-terminal domain; KEGG: son:SO3016 Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 2782259 5080479 Sputcn32_2401 Shewanella putrefaciens CN-32 Sua5/YciO/YrdC/YwlC family protein YP_001183921.1 2781639 R 319224 CDS YP_001183922.1 146293498 5080480 complement(2782256..2783116) 1 NC_009438.1 PFAM: PHP C-terminal domain protein; SMART: phosphoesterase PHP domain protein; KEGG: she:Shewmr4_1463 PHP C-terminal domain protein; phosphotransferase domain-containing protein 2783116 5080480 Sputcn32_2402 Shewanella putrefaciens CN-32 phosphotransferase domain-containing protein YP_001183922.1 2782256 R 319224 CDS YP_001183923.1 146293499 5080481 2783532..2785157 1 NC_009438.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2785157 5080481 Sputcn32_2403 Shewanella putrefaciens CN-32 anthranilate synthase component I YP_001183923.1 2783532 D 319224 CDS YP_001183924.1 146293500 5080482 2785167..2785769 1 NC_009438.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2785769 5080482 Sputcn32_2404 Shewanella putrefaciens CN-32 anthranilate synthase component II YP_001183924.1 2785167 D 319224 CDS YP_001183925.1 146293501 5080483 2785766..2786812 1 NC_009438.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2786812 trpD 5080483 trpD Shewanella putrefaciens CN-32 anthranilate phosphoribosyltransferase YP_001183925.1 2785766 D 319224 CDS YP_001183926.1 146293502 5080484 2786819..2788297 1 NC_009438.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2788297 5080484 Sputcn32_2406 Shewanella putrefaciens CN-32 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_001183926.1 2786819 D 319224 CDS YP_001183927.1 146293503 5080485 2788410..2789600 1 NC_009438.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2789600 5080485 Sputcn32_2407 Shewanella putrefaciens CN-32 tryptophan synthase subunit beta YP_001183927.1 2788410 D 319224 CDS YP_001183928.1 146293504 5080486 2789606..2790442 1 NC_009438.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2790442 trpA 5080486 trpA Shewanella putrefaciens CN-32 tryptophan synthase subunit alpha YP_001183928.1 2789606 D 319224 CDS YP_001183929.1 146293505 5080487 2790513..2790944 1 NC_009438.1 KEGG: she:Shewmr4_1456 hypothetical protein; hypothetical protein 2790944 5080487 Sputcn32_2409 Shewanella putrefaciens CN-32 hypothetical protein YP_001183929.1 2790513 D 319224 CDS YP_001183930.1 146293506 5080488 2791016..2791300 1 NC_009438.1 KEGG: son:SO3029 hypothetical protein; hypothetical protein 2791300 5080488 Sputcn32_2410 Shewanella putrefaciens CN-32 hypothetical protein YP_001183930.1 2791016 D 319224 CDS YP_001183931.1 146293507 5080489 2791987..2793504 1 NC_009438.1 KEGG: shm:Shewmr7_1520 L-lysine 6-monooxygenase (NADPH); L-lysine 6-monooxygenase 2793504 5080489 Sputcn32_2411 Shewanella putrefaciens CN-32 L-lysine 6-monooxygenase YP_001183931.1 2791987 D 319224 CDS YP_001183932.1 146293508 5080490 2793504..2794193 1 NC_009438.1 KEGG: son:SO3031 siderophore biosynthesis protein, putative; siderophore biosynthesis protein 2794193 5080490 Sputcn32_2412 Shewanella putrefaciens CN-32 siderophore biosynthesis protein YP_001183932.1 2793504 D 319224 CDS YP_001183933.1 146293509 5080491 2794194..2796122 1 NC_009438.1 PFAM: IucA/IucC family protein; KEGG: she:Shewmr4_1452 IucA/IucC family protein; IucA/IucC family protein 2796122 5080491 Sputcn32_2413 Shewanella putrefaciens CN-32 IucA/IucC family protein YP_001183933.1 2794194 D 319224 CDS YP_001183934.1 146293510 5080492 2796219..2798432 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_1517 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 2798432 5080492 Sputcn32_2414 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001183934.1 2796219 D 319224 CDS YP_001183935.1 146293511 5080493 2798577..2799701 1 NC_009438.1 PFAM: ferric iron reductase; KEGG: son:SO3034 ferric iron reductase protein, putative; ferric iron reductase 2799701 5080493 Sputcn32_2415 Shewanella putrefaciens CN-32 ferric iron reductase YP_001183935.1 2798577 D 319224 CDS YP_001183936.1 146293512 5080494 2799921..2800466 1 NC_009438.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2800466 5080494 Sputcn32_2416 Shewanella putrefaciens CN-32 intracellular septation protein A YP_001183936.1 2799921 D 319224 CDS YP_001183937.1 146293513 5080495 2800466..2800765 1 NC_009438.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 2800765 5080495 Sputcn32_2417 Shewanella putrefaciens CN-32 YciI-like protein YP_001183937.1 2800466 D 319224 CDS YP_001183938.1 146293514 5080496 2800765..2801577 1 NC_009438.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2801577 5080496 Sputcn32_2418 Shewanella putrefaciens CN-32 exonuclease III YP_001183938.1 2800765 D 319224 CDS YP_001183939.1 146293515 5080497 complement(2801713..2802150) 1 NC_009438.1 KEGG: rpe:RPE_3539 hypothetical protein; hypothetical protein 2802150 5080497 Sputcn32_2419 Shewanella putrefaciens CN-32 hypothetical protein YP_001183939.1 2801713 R 319224 CDS YP_001183940.1 146293516 5080498 complement(2802224..2802655) 1 NC_009438.1 KEGG: shm:Shewmr7_1510 hypothetical protein; hypothetical protein 2802655 5080498 Sputcn32_2420 Shewanella putrefaciens CN-32 hypothetical protein YP_001183940.1 2802224 R 319224 CDS YP_001183941.1 146293517 5080499 complement(2802762..2803193) 1 NC_009438.1 KEGG: son:SO3045 hypothetical protein; hypothetical protein 2803193 5080499 Sputcn32_2421 Shewanella putrefaciens CN-32 hypothetical protein YP_001183941.1 2802762 R 319224 CDS YP_001183942.1 146293518 5078556 complement(2803553..2805007) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_1442 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 2805007 5078556 Sputcn32_2422 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001183942.1 2803553 R 319224 CDS YP_001183943.1 146293519 5078557 complement(2805135..2805626) 1 NC_009438.1 PFAM: protein of unknown function DUF1097; KEGG: shm:Shewmr7_1506 protein of unknown function DUF1097; hypothetical protein 2805626 5078557 Sputcn32_2423 Shewanella putrefaciens CN-32 hypothetical protein YP_001183943.1 2805135 R 319224 CDS YP_001183944.1 146293520 5078558 complement(2806013..2808259) 1 NC_009438.1 PFAM: aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: son:SO3048 isoquinoline 1-oxidoreductase, beta subunit, putative; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 2808259 5078558 Sputcn32_2424 Shewanella putrefaciens CN-32 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_001183944.1 2806013 R 319224 CDS YP_001183945.1 146293521 5078559 complement(2808261..2808764) 1 NC_009438.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: shm:Shewmr7_1504 (2Fe-2S)-binding domain protein; 2Fe-2S iron-sulfur cluster binding domain-containing protein 2808764 5078559 Sputcn32_2425 Shewanella putrefaciens CN-32 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_001183945.1 2808261 R 319224 CDS YP_001183946.1 146293522 5078560 complement(2808768..2809433) 1 NC_009438.1 KEGG: she:Shewmr4_1438 hypothetical protein; hypothetical protein 2809433 5078560 Sputcn32_2426 Shewanella putrefaciens CN-32 hypothetical protein YP_001183946.1 2808768 R 319224 CDS YP_001183947.1 146293523 5078561 complement(2809442..2810458) 1 NC_009438.1 PFAM: protein of unknown function DUF182; KEGG: she:Shewmr4_1437 protein of unknown function DUF182; hypothetical protein 2810458 5078561 Sputcn32_2427 Shewanella putrefaciens CN-32 hypothetical protein YP_001183947.1 2809442 R 319224 CDS YP_001183948.1 146293524 5078562 complement(2810700..2811344) 1 NC_009438.1 PFAM: beta-lactamase domain protein; KEGG: shm:Shewmr7_1500 beta-lactamase domain protein; beta-lactamase domain-containing protein 2811344 5078562 Sputcn32_2428 Shewanella putrefaciens CN-32 beta-lactamase domain-containing protein YP_001183948.1 2810700 R 319224 CDS YP_001183949.1 146293525 5078563 2811526..2812815 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; KEGG: she:Shewmr4_1434 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 2812815 5078563 Sputcn32_2429 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001183949.1 2811526 D 319224 CDS YP_001183950.1 146293526 5078564 complement(2813037..2813444) 1 NC_009438.1 KEGG: son:SO3056 tetraheme cytochrome c; tetraheme cytochrome c 2813444 5078564 Sputcn32_2430 Shewanella putrefaciens CN-32 tetraheme cytochrome c YP_001183950.1 2813037 R 319224 CDS YP_001183951.1 146293527 5078565 complement(2813463..2815100) 1 NC_009438.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: son:SO3057 Pal/histidase family protein; phenylalanine/histidine ammonia-lyase 2815100 5078565 Sputcn32_2431 Shewanella putrefaciens CN-32 phenylalanine/histidine ammonia-lyase YP_001183951.1 2813463 R 319224 CDS YP_001183952.1 146293528 5078566 complement(2815141..2816694) 1 NC_009438.1 TIGRFAM: flavocytochrome c; PFAM: monooxygenase, FAD-binding; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO3058 flavocytochrome c flavin subunit, putative; flavocytochrome c 2816694 5078566 Sputcn32_2432 Shewanella putrefaciens CN-32 flavocytochrome c YP_001183952.1 2815141 R 319224 CDS YP_001183953.1 146293529 5078567 2816860..2818386 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: son:SO3059 formate hydrogenlyase transcriptional activator, putative; sigma-54 dependent trancsriptional regulator 2818386 5078567 Sputcn32_2433 Shewanella putrefaciens CN-32 sigma-54 dependent trancsriptional regulator YP_001183953.1 2816860 D 319224 CDS YP_001183954.1 146293530 5078568 complement(2818516..2819685) 1 NC_009438.1 PFAM: porin, Gram-negative type; KEGG: son:SO3060 outer membrane porin, putative; porin 2819685 5078568 Sputcn32_2434 Shewanella putrefaciens CN-32 porin YP_001183954.1 2818516 R 319224 CDS YP_001183955.1 146293531 5078569 complement(2819934..2822060) 1 NC_009438.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 2822060 5078569 Sputcn32_2435 Shewanella putrefaciens CN-32 DNA topoisomerase III YP_001183955.1 2819934 R 319224 CDS YP_001183956.1 146293532 5078570 2822223..2822513 1 NC_009438.1 KEGG: shm:Shewmr7_1497 hypothetical protein; hypothetical protein 2822513 5078570 Sputcn32_2436 Shewanella putrefaciens CN-32 hypothetical protein YP_001183956.1 2822223 D 319224 CDS YP_001183957.1 146293533 5078571 complement(2822616..2824130) 1 NC_009438.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2824130 5078571 Sputcn32_2437 Shewanella putrefaciens CN-32 amidophosphoribosyltransferase YP_001183957.1 2822616 R 319224 CDS YP_001183958.1 146293534 5078572 complement(2824262..2824750) 1 NC_009438.1 PFAM: Colicin V production protein; KEGG: son:SO3065 colicin V production protein; colicin V production protein 2824750 5078572 Sputcn32_2438 Shewanella putrefaciens CN-32 colicin V production protein YP_001183958.1 2824262 R 319224 CDS YP_001183959.1 146293535 5078573 complement(2824865..2825644) 1 NC_009438.1 PFAM: Sporulation domain protein; KEGG: shm:Shewmr7_1493 sporulation domain protein; sporulation domain-containing protein 2825644 5078573 Sputcn32_2439 Shewanella putrefaciens CN-32 sporulation domain-containing protein YP_001183959.1 2824865 R 319224 CDS YP_001183960.1 146293536 5078574 complement(2825628..2826899) 1 NC_009438.1 KEGG: she:Shewmr4_1427 FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetases domain protein; Mur ligase, middle domain protein; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 2826899 5078574 Sputcn32_2440 Shewanella putrefaciens CN-32 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_001183960.1 2825628 R 319224 CDS YP_001183961.1 146293537 5078575 complement(2826969..2827754) 1 NC_009438.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 2827754 truA 5078575 truA Shewanella putrefaciens CN-32 tRNA pseudouridine synthase A YP_001183961.1 2826969 R 319224 CDS YP_001183962.1 146293538 5078576 complement(2827857..2831150) 1 NC_009438.1 KEGG: shm:Shewmr7_1490 hypothetical protein; hypothetical protein 2831150 5078576 Sputcn32_2442 Shewanella putrefaciens CN-32 hypothetical protein YP_001183962.1 2827857 R 319224 CDS YP_001183963.1 146293539 5078577 complement(2831328..2832344) 1 NC_009438.1 KEGG: shm:Shewmr7_1489 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding; Semialdehyde dehydrogenase, dimerisation region; aspartate-semialdehyde dehydrogenase 2832344 5078577 Sputcn32_2443 Shewanella putrefaciens CN-32 aspartate-semialdehyde dehydrogenase YP_001183963.1 2831328 R 319224 CDS YP_001183964.1 146293540 5078578 complement(2832347..2833477) 1 NC_009438.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; KEGG: son:SO3071 erythronate-4-phosphate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase 2833477 5078578 Sputcn32_2444 Shewanella putrefaciens CN-32 D-isomer specific 2-hydroxyacid dehydrogenase YP_001183964.1 2832347 R 319224 CDS YP_001183965.1 146293541 5078579 complement(2833636..2834871) 1 NC_009438.1 PFAM: beta-ketoacyl synthase; KEGG: shm:Shewmr7_1487 beta-ketoacyl synthase; beta-ketoacyl synthase 2834871 5078579 Sputcn32_2445 Shewanella putrefaciens CN-32 beta-ketoacyl synthase YP_001183965.1 2833636 R 319224 CDS YP_001183966.1 146293542 5078580 2834986..2837028 1 NC_009438.1 PFAM: FAD dependent oxidoreductase; KEGG: shm:Shewmr7_1486 FAD dependent oxidoreductase; FAD dependent oxidoreductase 2837028 5078580 Sputcn32_2446 Shewanella putrefaciens CN-32 FAD dependent oxidoreductase YP_001183966.1 2834986 D 319224 CDS YP_001183967.1 146293543 5078581 complement(2837125..2837898) 1 NC_009438.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: shm:Shewmr7_1485 tRNA/rRNA methyltransferase (SpoU); tRNA/rRNA methyltransferase SpoU 2837898 5078581 Sputcn32_2447 Shewanella putrefaciens CN-32 tRNA/rRNA methyltransferase SpoU YP_001183967.1 2837125 R 319224 CDS YP_001183968.1 146293544 5078582 complement(2837888..2838172) 1 NC_009438.1 KEGG: she:Shewmr4_1419 hypothetical protein; hypothetical protein 2838172 5078582 Sputcn32_2448 Shewanella putrefaciens CN-32 hypothetical protein YP_001183968.1 2837888 R 319224 CDS YP_001183969.1 146293545 5078583 complement(2838177..2839355) 1 NC_009438.1 PFAM: ATP-NAD/AcoX kinase; KEGG: son:SO3077 hypothetical protein; ATP-NAD/AcoX kinase 2839355 5078583 Sputcn32_2449 Shewanella putrefaciens CN-32 ATP-NAD/AcoX kinase YP_001183969.1 2838177 R 319224 CDS YP_001183970.1 146293546 5078584 complement(2839406..2840581) 1 NC_009438.1 PFAM: nucleoside:H+ symporter; major facilitator superfamily MFS_1; KEGG: shm:Shewmr7_1482 major facilitator superfamily MFS_1; major facilitator superfamily transporter 2840581 5078584 Sputcn32_2450 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001183970.1 2839406 R 319224 CDS YP_001183971.1 146293547 5078585 complement(2840649..2841743) 1 NC_009438.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 2841743 5078585 Sputcn32_2451 Shewanella putrefaciens CN-32 chorismate synthase YP_001183971.1 2840649 R 319224 CDS YP_001183972.1 146293548 5078586 complement(2841866..2842810) 1 NC_009438.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2842810 5078586 Sputcn32_2452 Shewanella putrefaciens CN-32 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_001183972.1 2841866 R 319224 CDS YP_001183973.1 146293549 5078587 2842892..2843422 1 NC_009438.1 PFAM: Smr protein/MutS2; KEGG: son:SO3081 Smr domain protein; hypothetical protein 2843422 5078587 Sputcn32_2453 Shewanella putrefaciens CN-32 hypothetical protein YP_001183973.1 2842892 D 319224 CDS YP_001183974.1 146293550 5078588 complement(2843500..2843970) 1 NC_009438.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: she:Shewmr4_1413 phosphohistidine phosphatase, SixA; phosphohistidine phosphatase, SixA 2843970 5078588 Sputcn32_2454 Shewanella putrefaciens CN-32 phosphohistidine phosphatase, SixA YP_001183974.1 2843500 R 319224 CDS YP_001183975.1 146293551 5078589 2844140..2846929 1 NC_009438.1 PFAM: peptidase M16 domain protein; KEGG: shm:Shewmr7_1477 peptidase M16 domain protein; peptidase M16 domain-containing protein 2846929 5078589 Sputcn32_2455 Shewanella putrefaciens CN-32 peptidase M16 domain-containing protein YP_001183975.1 2844140 D 319224 CDS YP_001183976.1 146293552 5078590 2847181..2851497 1 NC_009438.1 KEGG: she:Shewmr4_1411 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 2851497 5078590 Sputcn32_2456 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001183976.1 2847181 D 319224 CDS YP_001183977.1 146293553 5078591 2851607..2852071 1 NC_009438.1 KEGG: son:SO3085 hypothetical protein; hypothetical protein 2852071 5078591 Sputcn32_2457 Shewanella putrefaciens CN-32 hypothetical protein YP_001183977.1 2851607 D 319224 CDS YP_001183978.1 146293554 5078592 complement(2852368..2852568) 1 NC_009438.1 KEGG: son:SO3087 hypothetical protein; hypothetical protein 2852568 5078592 Sputcn32_2458 Shewanella putrefaciens CN-32 hypothetical protein YP_001183978.1 2852368 R 319224 CDS YP_001183979.1 146293555 5078593 complement(2852897..2855017) 1 NC_009438.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 2855017 fadJ 5078593 fadJ Shewanella putrefaciens CN-32 multifunctional fatty acid oxidation complex subunit alpha YP_001183979.1 2852897 R 319224 CDS YP_001183980.1 146293556 5078594 complement(2855023..2856333) 1 NC_009438.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 2856333 fadI 5078594 fadI Shewanella putrefaciens CN-32 3-ketoacyl-CoA thiolase YP_001183980.1 2855023 R 319224 CDS YP_001183981.1 146293557 5078595 2856545..2857552 1 NC_009438.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; KEGG: shm:Shewmr7_1471 ATPase associated with various cellular activities, AAA_3; ATPase 2857552 5078595 Sputcn32_2461 Shewanella putrefaciens CN-32 ATPase YP_001183981.1 2856545 D 319224 CDS YP_001183982.1 146293558 5078596 2857577..2858530 1 NC_009438.1 PFAM: protein of unknown function DUF58; KEGG: son:SO3091 hypothetical protein; hypothetical protein 2858530 5078596 Sputcn32_2462 Shewanella putrefaciens CN-32 hypothetical protein YP_001183982.1 2857577 D 319224 CDS YP_001183983.1 146293559 5078597 2858610..2859173 1 NC_009438.1 KEGG: shm:Shewmr7_1469 hypothetical protein; hypothetical protein 2859173 5078597 Sputcn32_2463 Shewanella putrefaciens CN-32 hypothetical protein YP_001183983.1 2858610 D 319224 CDS YP_001183984.1 146293560 5078598 2859167..2860186 1 NC_009438.1 PFAM: von Willebrand factor, type A; KEGG: shm:Shewmr7_1468 von Willebrand factor, type A; von Willebrand factor type A domain-containing protein 2860186 5078598 Sputcn32_2464 Shewanella putrefaciens CN-32 von Willebrand factor type A domain-containing protein YP_001183984.1 2859167 D 319224 CDS YP_001183985.1 146293561 5078599 2860186..2862177 1 NC_009438.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: von Willebrand factor, type A; Tetratricopeptide domain protein; KEGG: she:Shewmr4_1402 tetratricopeptide TPR_2 repeat protein; hypothetical protein 2862177 5078599 Sputcn32_2465 Shewanella putrefaciens CN-32 hypothetical protein YP_001183985.1 2860186 D 319224 CDS YP_001183986.1 146293562 5078600 2862171..2863814 1 NC_009438.1 KEGG: shm:Shewmr7_1466 hypothetical protein; hypothetical protein 2863814 5078600 Sputcn32_2466 Shewanella putrefaciens CN-32 hypothetical protein YP_001183986.1 2862171 D 319224 CDS YP_001183987.1 146293563 5078601 2863890..2864453 1 NC_009438.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2864453 5078601 Sputcn32_2467 Shewanella putrefaciens CN-32 RNA polymerase sigma factor YP_001183987.1 2863890 D 319224 CDS YP_001183988.1 146293564 5078602 2864446..2865150 1 NC_009438.1 KEGG: she:Shewmr4_1399 hypothetical protein; hypothetical protein 2865150 5078602 Sputcn32_2468 Shewanella putrefaciens CN-32 hypothetical protein YP_001183988.1 2864446 D 319224 CDS YP_001183989.1 146293565 5078603 2865265..2866758 1 NC_009438.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: shm:Shewmr7_1463 sodium/proline symporter; sodium/proline symporter 2866758 5078603 Sputcn32_2469 Shewanella putrefaciens CN-32 sodium/proline symporter YP_001183989.1 2865265 D 319224 CDS YP_001183990.1 146293566 5078604 2867080..2868417 1 NC_009438.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: son:SO3099 long-chain fatty acid transport protein, putative; aromatic hydrocarbon degradation membrane protein 2868417 5078604 Sputcn32_2470 Shewanella putrefaciens CN-32 aromatic hydrocarbon degradation membrane protein YP_001183990.1 2867080 D 319224 CDS YP_001183991.1 146293567 5078605 2868522..2868908 1 NC_009438.1 KEGG: shm:Shewmr7_1461 hypothetical protein; hypothetical protein 2868908 5078605 Sputcn32_2471 Shewanella putrefaciens CN-32 hypothetical protein YP_001183991.1 2868522 D 319224 CDS YP_001183992.1 146293568 5078606 2869016..2869732 1 NC_009438.1 PFAM: protein of unknown function DUF541; KEGG: shm:Shewmr7_1460 protein of unknown function DUF541; hypothetical protein 2869732 5078606 Sputcn32_2472 Shewanella putrefaciens CN-32 hypothetical protein YP_001183992.1 2869016 D 319224 CDS YP_001183993.1 146293569 5080890 2869903..2870925 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: she:Shewmr4_1394 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 2870925 5080890 Sputcn32_2473 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001183993.1 2869903 D 319224 CDS YP_001183994.1 146293570 5080891 2870951..2874178 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: she:Shewmr4_1393 acriflavin resistance protein; acriflavin resistance protein 2874178 5080891 Sputcn32_2474 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001183994.1 2870951 D 319224 CDS YP_001183995.1 146293571 5080892 2874220..2874432 1 NC_009438.1 KEGG: shm:Shewmr7_1457 hypothetical protein; hypothetical protein 2874432 5080892 Sputcn32_2475 Shewanella putrefaciens CN-32 hypothetical protein YP_001183995.1 2874220 D 319224 CDS YP_001183996.1 146293572 5080893 2874506..2874844 1 NC_009438.1 PFAM: Rhodanese domain protein; KEGG: son:SO3105 phage shock protein E; rhodanese domain-containing protein 2874844 5080893 Sputcn32_2476 Shewanella putrefaciens CN-32 rhodanese domain-containing protein YP_001183996.1 2874506 D 319224 CDS YP_001183997.1 146293573 5080894 2875373..2877844 1 NC_009438.1 PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; Proprotein convertase, P; protease-associated PA domain protein; peptidase domain protein; proteinase inhibitor I9, subtilisin propeptide; KEGG: shm:Shewmr7_1455 peptidase S8 and S53, subtilisin, kexin, sedolisin; peptidase S8/S53 subtilisin kexin sedolisin 2877844 5080894 Sputcn32_2477 Shewanella putrefaciens CN-32 peptidase S8/S53 subtilisin kexin sedolisin YP_001183997.1 2875373 D 319224 CDS YP_001183998.1 146293574 5080895 complement(2877901..2878446) 1 NC_009438.1 PFAM: YaeQ family protein; KEGG: son:SO3107 hypothetical protein; YaeQ family protein 2878446 5080895 Sputcn32_2478 Shewanella putrefaciens CN-32 YaeQ family protein YP_001183998.1 2877901 R 319224 CDS YP_001183999.1 146293575 5080896 complement(2878541..2879452) 1 NC_009438.1 TIGRFAM: siroheme synthase; KEGG: son:SO3108 precorrin-2 oxidase / ferrochelatase; siroheme synthase 2879452 5080896 Sputcn32_2479 Shewanella putrefaciens CN-32 siroheme synthase YP_001183999.1 2878541 R 319224 CDS YP_001184000.1 146293576 5080897 complement(2879597..2879914) 1 NC_009438.1 KEGG: shm:Shewmr7_1451 hypothetical protein; hypothetical protein 2879914 5080897 Sputcn32_2480 Shewanella putrefaciens CN-32 hypothetical protein YP_001184000.1 2879597 R 319224 CDS YP_001184001.1 146293577 5080898 complement(2880148..2881095) 1 NC_009438.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2881095 secF 5080898 secF Shewanella putrefaciens CN-32 preprotein translocase subunit SecF YP_001184001.1 2880148 R 319224 CDS YP_001184002.1 146293578 5080899 complement(2881108..2882958) 1 NC_009438.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2882958 secD 5080899 secD Shewanella putrefaciens CN-32 preprotein translocase subunit SecD YP_001184002.1 2881108 R 319224 CDS YP_001184003.1 146293579 5080900 complement(2882976..2883308) 1 NC_009438.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 2883308 yajC 5080900 yajC Shewanella putrefaciens CN-32 preprotein translocase subunit YajC YP_001184003.1 2882976 R 319224 CDS YP_001184004.1 146293580 5080901 complement(2883336..2884460) 1 NC_009438.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2884460 tgt 5080901 tgt Shewanella putrefaciens CN-32 queuine tRNA-ribosyltransferase YP_001184004.1 2883336 R 319224 CDS YP_001184005.1 146293581 5080902 complement(2884620..2885657) 1 NC_009438.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2885657 queA 5080902 queA Shewanella putrefaciens CN-32 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_001184005.1 2884620 R 319224 CDS YP_001184006.1 146293582 5080903 complement(2885714..2885932) 1 NC_009438.1 KEGG: son:SO3115 hypothetical protein; hypothetical protein 2885932 5080903 Sputcn32_2486 Shewanella putrefaciens CN-32 hypothetical protein YP_001184006.1 2885714 R 319224 CDS YP_001184007.1 146293583 5080904 2886018..2886653 1 NC_009438.1 PFAM: protein of unknown function DUF479; KEGG: shm:Shewmr7_1444 protein of unknown function DUF479; hypothetical protein 2886653 5080904 Sputcn32_2487 Shewanella putrefaciens CN-32 hypothetical protein YP_001184007.1 2886018 D 319224 CDS YP_001184008.1 146293584 5080905 2886865..2887536 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: shm:Shewmr7_1442 pseudouridylate synthase; pseudouridylate synthase 2887536 5080905 Sputcn32_2488 Shewanella putrefaciens CN-32 pseudouridylate synthase YP_001184008.1 2886865 D 319224 CDS YP_001184009.1 146293585 5080906 complement(2887593..2888027) 1 NC_009438.1 KEGG: son:SO3119 hypothetical protein; hypothetical protein 2888027 5080906 Sputcn32_2489 Shewanella putrefaciens CN-32 hypothetical protein YP_001184009.1 2887593 R 319224 CDS YP_001184010.1 146293586 5080907 2888350..2889729 1 NC_009438.1 PFAM: oxidoreductase domain protein; KEGG: shm:Shewmr7_1440 twin-arginine translocation pathway signal; oxidoreductase domain-containing protein 2889729 5080907 Sputcn32_2490 Shewanella putrefaciens CN-32 oxidoreductase domain-containing protein YP_001184010.1 2888350 D 319224 CDS YP_001184011.1 146293587 5080908 complement(2889792..2890328) 1 NC_009438.1 PFAM: NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30; KEGG: son:SO3121 hypothetical protein; NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 2890328 5080908 Sputcn32_2491 Shewanella putrefaciens CN-32 NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 YP_001184011.1 2889792 R 319224 CDS YP_001184012.1 146293588 5080909 complement(2890393..2891619) 1 NC_009438.1 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 2891619 5080909 Sputcn32_2492 Shewanella putrefaciens CN-32 serine/threonine transporter SstT YP_001184012.1 2890393 R 319224 CDS YP_001184013.1 146293589 5080910 complement(2891773..2892672) 1 NC_009438.1 PFAM: response regulator receiver; CheW domain protein; KEGG: shm:Shewmr7_1437 response regulator receiver modulated CheW protein; putative CheW protein 2892672 5080910 Sputcn32_2493 Shewanella putrefaciens CN-32 putative CheW protein YP_001184013.1 2891773 R 319224 CDS YP_001184014.1 146293590 5080911 complement(2892804..2893274) 1 NC_009438.1 PFAM: Dual specificity protein phosphatase; KEGG: son:SO3124 tyrosine-specific protein phosphatase, putative; dual specificity protein phosphatase 2893274 5080911 Sputcn32_2494 Shewanella putrefaciens CN-32 dual specificity protein phosphatase YP_001184014.1 2892804 R 319224 CDS YP_001184015.1 146293591 5080912 complement(2893339..2894622) 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: shm:Shewmr7_1434 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 2894622 5080912 Sputcn32_2495 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001184015.1 2893339 R 319224 CDS YP_001184016.1 146293592 5080913 complement(2894670..2895227) 1 NC_009438.1 KEGG: shm:Shewmr7_1433 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2895227 5080913 Sputcn32_2496 Shewanella putrefaciens CN-32 methylated-DNA--protein-cysteine methyltransferase YP_001184016.1 2894670 R 319224 CDS YP_001184017.1 146293593 5080914 complement(2895273..2896964) 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; HhH-GPD family protein; Ada, metal-binding domain protein; AlkA domain protein; KEGG: son:SO3127 Ada regulatory protein, putative; alcohol dehydrogenase 2896964 5080914 Sputcn32_2497 Shewanella putrefaciens CN-32 alcohol dehydrogenase YP_001184017.1 2895273 R 319224 CDS YP_001184018.1 146293594 5080915 2897449..2899278 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: she:Shewmr4_1366 ABC transporter related; ABC transporter-like protein 2899278 5080915 Sputcn32_2498 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184018.1 2897449 D 319224 CDS YP_001184019.1 146293595 5080925 complement(2901539..2902948) 1 NC_009438.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2902948 gltX 5080925 gltX Shewanella putrefaciens CN-32 glutamyl-tRNA synthetase YP_001184019.1 2901539 R 319224 CDS YP_001184020.1 146293596 5080844 2904592..2905614 1 NC_009438.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: shm:Shewmr7_1428 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 2905614 5080844 Sputcn32_2500 Shewanella putrefaciens CN-32 TRAP dicarboxylate transporter subunit DctP YP_001184020.1 2904592 D 319224 CDS YP_001184021.1 146293597 5080845 2905677..2906321 1 NC_009438.1 PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: she:Shewmr4_1362 tripartite ATP-independent periplasmic transporter, DctQ component; tripartite ATP-independent periplasmic transporter DctQ 2906321 5080845 Sputcn32_2501 Shewanella putrefaciens CN-32 tripartite ATP-independent periplasmic transporter DctQ YP_001184021.1 2905677 D 319224 CDS YP_001184022.1 146293598 5080846 2906321..2907718 1 NC_009438.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: shm:Shewmr7_1426 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 2907718 5080846 Sputcn32_2502 Shewanella putrefaciens CN-32 TRAP dicarboxylate transporter subunit DctM YP_001184022.1 2906321 D 319224 CDS YP_001184023.1 146293599 5080847 2907830..2909641 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: she:Shewmr4_1360 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 2909641 5080847 Sputcn32_2503 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001184023.1 2907830 D 319224 CDS YP_001184024.1 146293600 5080848 2909638..2911017 1 NC_009438.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: shm:Shewmr7_1424 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 2911017 5080848 Sputcn32_2504 Shewanella putrefaciens CN-32 two component, sigma54 specific, Fis family transcriptional regulator YP_001184024.1 2909638 D 319224 CDS YP_001184025.1 146293601 5080849 complement(2911124..2914195) 1 NC_009438.1 KEGG: she:Shewmr4_1358 hypothetical protein; hypothetical protein 2914195 5080849 Sputcn32_2505 Shewanella putrefaciens CN-32 hypothetical protein YP_001184025.1 2911124 R 319224 CDS YP_001184026.1 146293602 5080850 complement(2914298..2914876) 1 NC_009438.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2914876 5080850 Sputcn32_2506 Shewanella putrefaciens CN-32 thymidine kinase YP_001184026.1 2914298 R 319224 CDS YP_001184027.1 146293603 5080851 2915419..2917521 1 NC_009438.1 KEGG: she:Shewmr4_1356 hypothetical protein; hypothetical protein 2917521 5080851 Sputcn32_2507 Shewanella putrefaciens CN-32 hypothetical protein YP_001184027.1 2915419 D 319224 CDS YP_001184028.1 146293604 5080852 2917722..2919875 1 NC_009438.1 PFAM: peptidase M3A and M3B, thimet/oligopeptidase F; KEGG: shm:Shewmr7_1420 peptidyl-dipeptidase DCP; peptidyl-dipeptidase Dcp 2919875 5080852 Sputcn32_2508 Shewanella putrefaciens CN-32 peptidyl-dipeptidase Dcp YP_001184028.1 2917722 D 319224 CDS YP_001184029.1 146293605 5080853 complement(2919947..2921515) 1 NC_009438.1 PFAM: Na+/H+ antiporter NhaC; KEGG: shm:Shewmr7_1419 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 2921515 5080853 Sputcn32_2509 Shewanella putrefaciens CN-32 Na+/H+ antiporter NhaC YP_001184029.1 2919947 R 319224 CDS YP_001184030.1 146293606 5080854 complement(2921888..2922814) 1 NC_009438.1 PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: shm:Shewmr7_1418 electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 2922814 5080854 Sputcn32_2510 Shewanella putrefaciens CN-32 electron transfer flavoprotein subunit alpha YP_001184030.1 2921888 R 319224 CDS YP_001184031.1 146293607 5080855 complement(2922815..2923564) 1 NC_009438.1 PFAM: electron transfer flavoprotein beta-subunit; KEGG: shm:Shewmr7_1417 electron transfer flavoprotein beta-subunit; electron transfer flavoprotein subunit beta 2923564 5080855 Sputcn32_2511 Shewanella putrefaciens CN-32 electron transfer flavoprotein subunit beta YP_001184031.1 2922815 R 319224 CDS YP_001184032.1 146293608 5080856 2923877..2924269 1 NC_009438.1 PFAM: histone family protein nucleoid-structuring protein H-NS; KEGG: shm:Shewmr7_1416 histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2924269 5080856 Sputcn32_2512 Shewanella putrefaciens CN-32 histone family protein nucleoid-structuring protein H-NS YP_001184032.1 2923877 D 319224 CDS YP_001184033.1 146293609 5080857 2924485..2927574 1 NC_009438.1 PFAM: amidohydrolase; KEGG: shm:Shewmr7_1415 amidohydrolase; amidohydrolase 2927574 5080857 Sputcn32_2513 Shewanella putrefaciens CN-32 amidohydrolase YP_001184033.1 2924485 D 319224 CDS YP_001184034.1 146293610 5080858 2927574..2928890 1 NC_009438.1 KEGG: son:SO3149 hypothetical protein; hypothetical protein 2928890 5080858 Sputcn32_2514 Shewanella putrefaciens CN-32 hypothetical protein YP_001184034.1 2927574 D 319224 CDS YP_001184035.1 146293611 5080859 2928967..2929347 1 NC_009438.1 KEGG: shm:Shewmr7_1413 lipoprotein, putative; putative lipoprotein 2929347 5080859 Sputcn32_2515 Shewanella putrefaciens CN-32 putative lipoprotein YP_001184035.1 2928967 D 319224 CDS YP_001184036.1 146293612 5080860 2929486..2930220 1 NC_009438.1 PFAM: protein of unknown function UPF0066; KEGG: she:Shewmr4_1347 protein of unknown function UPF0066; hypothetical protein 2930220 5080860 Sputcn32_2516 Shewanella putrefaciens CN-32 hypothetical protein YP_001184036.1 2929486 D 319224 CDS YP_001184037.1 146293613 5080861 2930221..2930850 1 NC_009438.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: shm:Shewmr7_1411 transferase hexapeptide repeat containing protein; hexapaptide repeat-containing transferase 2930850 5080861 Sputcn32_2517 Shewanella putrefaciens CN-32 hexapaptide repeat-containing transferase YP_001184037.1 2930221 D 319224 CDS YP_001184038.1 146293614 5080862 2931085..2932800 1 NC_009438.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2932800 5080862 Sputcn32_2518 Shewanella putrefaciens CN-32 prolyl-tRNA synthetase YP_001184038.1 2931085 D 319224 CDS YP_001184039.1 146293615 5080863 complement(2932928..2934052) 1 NC_009438.1 PFAM: Patatin; KEGG: shm:Shewmr7_1409 patatin; patatin 2934052 5080863 Sputcn32_2519 Shewanella putrefaciens CN-32 patatin YP_001184039.1 2932928 R 319224 CDS YP_001184040.1 146293616 5080864 2934347..2934598 1 NC_009438.1 KEGG: son:SO3156.1 hypothetical protein; hypothetical protein 2934598 5080864 Sputcn32_2520 Shewanella putrefaciens CN-32 hypothetical protein YP_001184040.1 2934347 D 319224 CDS YP_001184041.1 146293617 5080865 2934747..2935457 1 NC_009438.1 KEGG: she:Shewmr4_1342 lipoprotein, putative; putative lipoprotein 2935457 5080865 Sputcn32_2521 Shewanella putrefaciens CN-32 putative lipoprotein YP_001184041.1 2934747 D 319224 CDS YP_001184042.1 146293618 5080866 2935466..2936251 1 NC_009438.1 PFAM: protein of unknown function DUF1017; KEGG: shm:Shewmr7_1406 protein of unknown function DUF1017; hypothetical protein 2936251 5080866 Sputcn32_2522 Shewanella putrefaciens CN-32 hypothetical protein YP_001184042.1 2935466 D 319224 CDS YP_001184043.1 146293619 5080867 2936251..2938617 1 NC_009438.1 PFAM: protein of unknown function DUF940, membrane lipoprotein putative; KEGG: son:SO3159 hypothetical protein; hypothetical protein 2938617 5080867 Sputcn32_2523 Shewanella putrefaciens CN-32 hypothetical protein YP_001184043.1 2936251 D 319224 CDS YP_001184044.1 146293620 5080868 complement(2939478..2939780) 1 NC_009438.1 PFAM: Excinuclease ABC, C subunit domain protein; KEGG: nme:NMB0047 putative endonuclease; excinuclease ABC subunit C 2939780 5080868 Sputcn32_2524 Shewanella putrefaciens CN-32 excinuclease ABC subunit C YP_001184044.1 2939478 R 319224 CDS YP_001184045.1 146293621 5080869 complement(2940654..2942003) 1 NC_009438.1 PFAM: GAF domain protein; ATP-binding region, ATPase domain protein domain protein; KEGG: son:SO3162 sensor histidine kinase; GAF sensor signal transduction histidine kinase 2942003 5080869 Sputcn32_2525 Shewanella putrefaciens CN-32 GAF sensor signal transduction histidine kinase YP_001184045.1 2940654 R 319224 CDS YP_001184046.1 146293622 5080870 2942377..2942823 1 NC_009438.1 PFAM: copper resistance lipoprotein NlpE; KEGG: son:SO3163 lipoprotein; copper resistance lipoprotein NlpE 2942823 5080870 Sputcn32_2526 Shewanella putrefaciens CN-32 copper resistance lipoprotein NlpE YP_001184046.1 2942377 D 319224 CDS YP_001184047.1 146293623 5080871 complement(2943787..2945727) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: son:SO3171 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 2945727 5080871 Sputcn32_2527 Shewanella putrefaciens CN-32 polysaccharide biosynthesis protein CapD YP_001184047.1 2943787 R 319224 CDS YP_001184048.1 146293624 5080872 complement(2945858..2946412) 1 NC_009438.1 PFAM: sugar transferase; KEGG: son:SO3172 galactosyl transferase; sugar transferase 2946412 5080872 Sputcn32_2528 Shewanella putrefaciens CN-32 sugar transferase YP_001184048.1 2945858 R 319224 CDS YP_001184049.1 146293625 5080873 complement(2946427..2947350) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: vvu:VV10777 nucleoside-diphosphate-sugar epimerase; NAD-dependent epimerase/dehydratase 2947350 5080873 Sputcn32_2529 Shewanella putrefaciens CN-32 NAD-dependent epimerase/dehydratase YP_001184049.1 2946427 R 319224 CDS YP_001184050.1 146293626 5080874 complement(2947343..2948284) 1 NC_009438.1 PFAM: glycosyl transferase, family 2; KEGG: gme:Gmet_1334 glycosyl transferase, family 2; glycosyl transferase family protein 2948284 5080874 Sputcn32_2530 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001184050.1 2947343 R 319224 CDS YP_001184051.1 146293627 5080875 complement(2948311..2949243) 1 NC_009438.1 PFAM: glycosyl transferase, family 2; KEGG: spd:SPD_0321 glycosyl transferase, group 2 family protein; glycosyl transferase family protein 2949243 5080875 Sputcn32_2531 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001184051.1 2948311 R 319224 CDS YP_001184052.1 146293628 5080876 complement(2949245..2950393) 1 NC_009438.1 KEGG: bfs:BF1561 putative transmembrane protein; hypothetical protein 2950393 5080876 Sputcn32_2532 Shewanella putrefaciens CN-32 hypothetical protein YP_001184052.1 2949245 R 319224 CDS YP_001184053.1 146293629 5080877 complement(2950386..2951231) 1 NC_009438.1 PFAM: glycosyl transferase, family 2; KEGG: ana:all1766 probable glycosyl transferase; glycosyl transferase family protein 2951231 5080877 Sputcn32_2533 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001184053.1 2950386 R 319224 CDS YP_001184054.1 146293630 5080878 complement(2951304..2952131) 1 NC_009438.1 KEGG: pfl:PFL_5102 glycosyltransferase, putative; hypothetical protein 2952131 5080878 Sputcn32_2534 Shewanella putrefaciens CN-32 hypothetical protein YP_001184054.1 2951304 R 319224 CDS YP_001184055.1 146293631 5080879 complement(2952196..2953425) 1 NC_009438.1 PFAM: polysaccharide biosynthesis protein; KEGG: bfs:BF1369 putative LPS biosynthesis related flippase; polysaccharide biosynthesis protein 2953425 5080879 Sputcn32_2535 Shewanella putrefaciens CN-32 polysaccharide biosynthesis protein YP_001184055.1 2952196 R 319224 CDS YP_001184056.1 146293632 5080880 complement(2953409..2954500) 1 NC_009438.1 PFAM: glycosyl transferase, group 1; KEGG: cac:CAC2313 glycosyltransferase; group 1 glycosyl transferase 2954500 5080880 Sputcn32_2536 Shewanella putrefaciens CN-32 group 1 glycosyl transferase YP_001184056.1 2953409 R 319224 CDS YP_001184057.1 146293633 5080881 complement(2954600..2955148) 1 NC_009438.1 KEGG: sbo:SBO_0865 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 2955148 5080881 Sputcn32_2537 Shewanella putrefaciens CN-32 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001184057.1 2954600 R 319224 CDS YP_001184058.1 146293634 5080882 complement(2955220..2956095) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sdn:Sden_2661 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 2956095 5080882 Sputcn32_2538 Shewanella putrefaciens CN-32 dTDP-4-dehydrorhamnose reductase YP_001184058.1 2955220 R 319224 CDS YP_001184059.1 146293635 5080883 complement(2956092..2956961) 1 NC_009438.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sfr:Sfri_2829 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 2956961 5080883 Sputcn32_2539 Shewanella putrefaciens CN-32 glucose-1-phosphate thymidylyltransferase YP_001184059.1 2956092 R 319224 CDS YP_001184060.1 146293636 5080884 complement(2957032..2958111) 1 NC_009438.1 NAD(P) binding; catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose; dTDP-glucose-4,6-dehydratase 2958111 5080884 Sputcn32_2540 Shewanella putrefaciens CN-32 dTDP-glucose-4,6-dehydratase YP_001184060.1 2957032 R 319224 CDS YP_001184061.1 146293637 5080885 complement(2958327..2959316) 1 NC_009438.1 PFAM: lipopolysaccharide biosynthesis; KEGG: son:SO3191 chain length determinant protein; lipopolysaccharide biosynthesis protein 2959316 5080885 Sputcn32_2541 Shewanella putrefaciens CN-32 lipopolysaccharide biosynthesis protein YP_001184061.1 2958327 R 319224 CDS YP_001184062.1 146293638 5080886 complement(2959508..2959861) 1 NC_009438.1 crystal structure of protein from Xanthomonas shows pentameric toroidal structure; physiological function is unknown; hypothetical protein 2959861 5080886 Sputcn32_2542 Shewanella putrefaciens CN-32 hypothetical protein YP_001184062.1 2959508 R 319224 CDS YP_001184063.1 146293639 5080887 complement(2960057..2962816) 1 NC_009438.1 PFAM: polysaccharide export protein; KEGG: son:SO3193 polysaccharide biosynthesis protein; polysaccharide export protein 2962816 5080887 Sputcn32_2543 Shewanella putrefaciens CN-32 polysaccharide export protein YP_001184063.1 2960057 R 319224 CDS YP_001184064.1 146293640 5080888 complement(2964311..2964817) 1 NC_009438.1 KEGG: son:SO3194 transcriptional activator rfaH, putative; TIGRFAM: transcriptional activator RfaH; PFAM: transcription antitermination protein NusG; SMART: NGN domain protein; NusG antitermination factor 2964817 5080888 Sputcn32_2544 Shewanella putrefaciens CN-32 NusG antitermination factor YP_001184064.1 2964311 R 319224 CDS YP_001184065.1 146293641 5080889 2965291..2966796 1 NC_009438.1 TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor, type I/II extracellular region; major facilitator superfamily MFS_1; KEGG: shm:Shewmr7_1380 amino acid/peptide transporter; amino acid/peptide transporter 2966796 5080889 Sputcn32_2545 Shewanella putrefaciens CN-32 amino acid/peptide transporter YP_001184065.1 2965291 D 319224 CDS YP_001184066.1 146293642 5078235 complement(2967397..2968527) 1 NC_009438.1 PFAM: response regulator receiver; KEGG: shm:Shewmr7_1379 response regulator receiver protein; response regulator receiver protein 2968527 5078235 Sputcn32_2546 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001184066.1 2967397 R 319224 CDS YP_001184067.1 146293643 5078236 complement(2968647..2969429) 1 NC_009438.1 PFAM: VacJ family lipoprotein; KEGG: shm:Shewmr7_1378 VacJ family lipoprotein; VacJ family lipoprotein 2969429 5078236 Sputcn32_2547 Shewanella putrefaciens CN-32 VacJ family lipoprotein YP_001184067.1 2968647 R 319224 CDS YP_001184068.1 146293644 5078237 2969660..2971579 1 NC_009438.1 KEGG: she:Shewmr4_1310 hypothetical protein; hypothetical protein 2971579 5078237 Sputcn32_2548 Shewanella putrefaciens CN-32 hypothetical protein YP_001184068.1 2969660 D 319224 CDS YP_001184069.1 146293645 5078238 2971620..2971931 1 NC_009438.1 KEGG: shm:Shewmr7_1376 FlhB domain protein; FlhB domain-containing protein 2971931 5078238 Sputcn32_2549 Shewanella putrefaciens CN-32 FlhB domain-containing protein YP_001184069.1 2971620 D 319224 CDS YP_001184070.1 146293646 5078239 complement(2972337..2972735) 1 NC_009438.1 KEGG: shm:Shewmr7_1375 hypothetical protein; hypothetical protein 2972735 5078239 Sputcn32_2550 Shewanella putrefaciens CN-32 hypothetical protein YP_001184070.1 2972337 R 319224 CDS YP_001184071.1 146293647 5078240 complement(2972906..2973400) 1 NC_009438.1 PFAM: CheW domain protein; KEGG: shm:Shewmr7_1374 CheW protein; putative CheW protein 2973400 5078240 Sputcn32_2551 Shewanella putrefaciens CN-32 putative CheW protein YP_001184071.1 2972906 R 319224 CDS YP_001184072.1 146293648 5078241 complement(2973408..2974400) 1 NC_009438.1 PFAM: CheW domain protein; KEGG: she:Shewmr4_1306 CheW protein; putative CheW protein 2974400 5078241 Sputcn32_2552 Shewanella putrefaciens CN-32 putative CheW protein YP_001184072.1 2973408 R 319224 CDS YP_001184073.1 146293649 5078242 complement(2974384..2975175) 1 NC_009438.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: son:SO3204 ParA family protein; cobyrinic acid a,c-diamide synthase 2975175 5078242 Sputcn32_2553 Shewanella putrefaciens CN-32 cobyrinic acid a,c-diamide synthase YP_001184073.1 2974384 R 319224 CDS YP_001184074.1 146293650 5078243 complement(2975231..2975665) 1 NC_009438.1 KEGG: she:Shewmr4_1304 hypothetical protein; hypothetical protein 2975665 5078243 Sputcn32_2554 Shewanella putrefaciens CN-32 hypothetical protein YP_001184074.1 2975231 R 319224 CDS YP_001184075.1 146293651 5078244 complement(2975688..2976806) 1 NC_009438.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 2976806 5078244 Sputcn32_2555 Shewanella putrefaciens CN-32 chemotaxis-specific methylesterase YP_001184075.1 2975688 R 319224 CDS YP_001184076.1 146293652 5078245 complement(2976827..2979052) 1 NC_009438.1 PFAM: CheW domain protein; ATP-binding region, ATPase domain protein domain protein; Signal transducing histidine kinase, homodimeric; Hpt domain protein; KEGG: shm:Shewmr7_1369 CheA signal transduction histidine kinases; CheA signal transduction histidine kinase 2979052 5078245 Sputcn32_2556 Shewanella putrefaciens CN-32 CheA signal transduction histidine kinase YP_001184076.1 2976827 R 319224 CDS YP_001184077.1 146293653 5078246 complement(2979068..2979805) 1 NC_009438.1 PFAM: Chemotaxis phosphatase, CheZ; KEGG: shm:Shewmr7_1368 chemotaxis phosphatase, CheZ; chemotaxis phosphatase, CheZ 2979805 5078246 Sputcn32_2557 Shewanella putrefaciens CN-32 chemotaxis phosphatase, CheZ YP_001184077.1 2979068 R 319224 CDS YP_001184078.1 146293654 5078247 complement(2979819..2980202) 1 NC_009438.1 PFAM: response regulator receiver; KEGG: shm:Shewmr7_1367 response regulator receiver protein; response regulator receiver protein 2980202 5078247 Sputcn32_2558 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001184078.1 2979819 R 319224 CDS YP_001184079.1 146293655 5078248 complement(2980250..2980963) 1 NC_009438.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 2980963 fliA 5078248 fliA Shewanella putrefaciens CN-32 flagellar biosynthesis sigma factor YP_001184079.1 2980250 R 319224 CDS YP_001184080.1 146293656 5078249 complement(2980956..2981837) 1 NC_009438.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: shm:Shewmr7_1365 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 2981837 5078249 Sputcn32_2560 Shewanella putrefaciens CN-32 cobyrinic acid a,c-diamide synthase YP_001184080.1 2980956 R 319224 CDS YP_001184081.1 146293657 5078250 complement(2981842..2983224) 1 NC_009438.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 2983224 flhF 5078250 flhF Shewanella putrefaciens CN-32 flagellar biosynthesis regulator FlhF YP_001184081.1 2981842 R 319224 CDS YP_001184082.1 146293658 5078251 complement(2983236..2985335) 1 NC_009438.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 2985335 flhA 5078251 flhA Shewanella putrefaciens CN-32 flagellar biosynthesis protein FlhA YP_001184082.1 2983236 R 319224 CDS YP_001184083.1 146293659 5078252 complement(2985428..2986558) 1 NC_009438.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 2986558 flhB 5078252 flhB Shewanella putrefaciens CN-32 flagellar biosynthesis protein FlhB YP_001184083.1 2985428 R 319224 CDS YP_001184084.1 146293660 5078253 complement(2986576..2987373) 1 NC_009438.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 2987373 fliR 5078253 fliR Shewanella putrefaciens CN-32 flagellar biosynthesis protein FliR YP_001184084.1 2986576 R 319224 CDS YP_001184085.1 146293661 5078254 complement(2987378..2987647) 1 NC_009438.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: son:SO3217 flagellar biosynthetic protein FliQ; flagellar biosynthetic protein FliQ 2987647 5078254 Sputcn32_2565 Shewanella putrefaciens CN-32 flagellar biosynthetic protein FliQ YP_001184085.1 2987378 R 319224 CDS YP_001184086.1 146293662 5078255 complement(2987665..2988411) 1 NC_009438.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 2988411 fliP 5078255 fliP Shewanella putrefaciens CN-32 flagellar biosynthesis protein FliP YP_001184086.1 2987665 R 319224 CDS YP_001184087.1 146293663 5078256 complement(2988408..2988827) 1 NC_009438.1 PFAM: flagellar biosynthesis protein, FliO; KEGG: she:Shewmr4_1291 flagellar biosynthesis protein, FliO; flagellar biosynthesis protein, FliO 2988827 5078256 Sputcn32_2567 Shewanella putrefaciens CN-32 flagellar biosynthesis protein, FliO YP_001184087.1 2988408 R 319224 CDS YP_001184088.1 146293664 5078257 complement(2988854..2989237) 1 NC_009438.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 2989237 fliN 5078257 fliN Shewanella putrefaciens CN-32 flagellar motor switch protein YP_001184088.1 2988854 R 319224 CDS YP_001184089.1 146293665 5078258 complement(2989249..2990280) 1 NC_009438.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 2990280 fliM 5078258 fliM Shewanella putrefaciens CN-32 flagellar motor switch protein FliM YP_001184089.1 2989249 R 319224 CDS YP_001184090.1 146293666 5078259 complement(2990320..2990835) 1 NC_009438.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 2990835 fliL 5078259 fliL Shewanella putrefaciens CN-32 flagellar basal body-associated protein FliL YP_001184090.1 2990320 R 319224 CDS YP_001184091.1 146293667 5078260 complement(2990927..2992402) 1 NC_009438.1 PFAM: flagellar hook-length control protein; KEGG: son:SO3223 flagellar hook-length control protein FliK; flagellar hook-length control protein 2992402 5078260 Sputcn32_2571 Shewanella putrefaciens CN-32 flagellar hook-length control protein YP_001184091.1 2990927 R 319224 CDS YP_001184092.1 146293668 5078261 complement(2992569..2993012) 1 NC_009438.1 TIGRFAM: flagellar export protein FliJ; KEGG: shm:Shewmr7_1353 flagellar export protein FliJ; flagellar export protein FliJ 2993012 5078261 Sputcn32_2572 Shewanella putrefaciens CN-32 flagellar export protein FliJ YP_001184092.1 2992569 R 319224 CDS YP_001184093.1 146293669 5078262 complement(2993024..2994361) 1 NC_009438.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 2994361 fliI 5078262 fliI Shewanella putrefaciens CN-32 flagellum-specific ATP synthase YP_001184093.1 2993024 R 319224 CDS YP_001184094.1 146293670 5078263 complement(2994330..2995286) 1 NC_009438.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 2995286 fliH 5078263 fliH Shewanella putrefaciens CN-32 flagellar assembly protein H YP_001184094.1 2994330 R 319224 CDS YP_001184095.1 146293671 5078264 complement(2995273..2996319) 1 NC_009438.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 2996319 fliG 5078264 fliG Shewanella putrefaciens CN-32 flagellar motor switch protein G YP_001184095.1 2995273 R 319224 CDS YP_001184096.1 146293672 5078265 complement(2996312..2997994) 1 NC_009438.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 2997994 fliF 5078265 fliF Shewanella putrefaciens CN-32 flagellar MS-ring protein YP_001184096.1 2996312 R 319224 CDS YP_001184097.1 146293673 5078266 complement(2998040..2998375) 1 NC_009438.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: she:Shewmr4_1281 flagellar hook-basal body complex subunit FliE; flagellar hook-basal body complex subunit FliE 2998375 5078266 Sputcn32_2577 Shewanella putrefaciens CN-32 flagellar hook-basal body complex subunit FliE YP_001184097.1 2998040 R 319224 CDS YP_001184098.1 146293674 5078267 complement(2998595..2999935) 1 NC_009438.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: she:Shewmr4_1280 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 2999935 5078267 Sputcn32_2578 Shewanella putrefaciens CN-32 two component, sigma54 specific, Fis family transcriptional regulator YP_001184098.1 2998595 R 319224 CDS YP_001184099.1 146293675 5078268 complement(2999928..3001010) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; SMART: PAS domain containing protein; KEGG: son:SO3231 flagellar regulatory protein B; PAS/PAC sensor signal transduction histidine kinase 3001010 5078268 Sputcn32_2579 Shewanella putrefaciens CN-32 PAS/PAC sensor signal transduction histidine kinase YP_001184099.1 2999928 R 319224 CDS YP_001184100.1 146293676 5078269 complement(3001120..3002553) 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; flagellar regulatory FleQ domain protein; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: shm:Shewmr7_1345 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 3002553 5078269 Sputcn32_2580 Shewanella putrefaciens CN-32 sigma-54 dependent trancsriptional regulator YP_001184100.1 3001120 R 319224 CDS YP_001184101.1 146293677 5078270 complement(3002849..3003259) 1 NC_009438.1 flagellin specific chaperone; flagellar protein FliS 3003259 fliS 5078270 fliS Shewanella putrefaciens CN-32 flagellar protein FliS YP_001184101.1 3002849 R 319224 CDS YP_001184102.1 146293678 5078271 complement(3003266..3003586) 1 NC_009438.1 KEGG: son:SO3234 hypothetical protein; hypothetical protein 3003586 5078271 Sputcn32_2582 Shewanella putrefaciens CN-32 hypothetical protein YP_001184102.1 3003266 R 319224 CDS YP_001184103.1 146293679 5078272 complement(3003598..3004971) 1 NC_009438.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; KEGG: son:SO3235 flagellar hook-associated protein FliD; flagellar hook-associated 2 domain-containing protein 3004971 5078272 Sputcn32_2583 Shewanella putrefaciens CN-32 flagellar hook-associated 2 domain-containing protein YP_001184103.1 3003598 R 319224 CDS YP_001184104.1 146293680 5078273 complement(3005018..3005407) 1 NC_009438.1 PFAM: flagellar protein FlaG protein; KEGG: son:SO3236 flagellin FlaG; flagellar protein FlaG protein 3005407 5078273 Sputcn32_2584 Shewanella putrefaciens CN-32 flagellar protein FlaG protein YP_001184104.1 3005018 R 319224 CDS YP_001184105.1 146293681 5078274 complement(3005553..3006368) 1 NC_009438.1 PFAM: flagellin domain protein; KEGG: sdn:Sden_1315 flagellin-like protein; flagellin domain-containing protein 3006368 5078274 Sputcn32_2585 Shewanella putrefaciens CN-32 flagellin domain-containing protein YP_001184105.1 3005553 R 319224 CDS YP_001184106.1 146293682 5078275 complement(3006629..3007450) 1 NC_009438.1 PFAM: flagellin domain protein; KEGG: sdn:Sden_1314 flagellin-like protein; flagellin domain-containing protein 3007450 5078275 Sputcn32_2586 Shewanella putrefaciens CN-32 flagellin domain-containing protein YP_001184106.1 3006629 R 319224 CDS YP_001184107.1 146293683 5078276 complement(3007553..3008764) 1 NC_009438.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes.; flagellar hook-associated protein FlgL 3008764 flgL 5078276 flgL Shewanella putrefaciens CN-32 flagellar hook-associated protein FlgL YP_001184107.1 3007553 R 319224 CDS YP_001184108.1 146293684 5078277 complement(3008776..3010701) 1 NC_009438.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: she:Shewmr4_1268 flagellar hook-associated protein FlgK; flagellar hook-associated protein FlgK 3010701 5078277 Sputcn32_2588 Shewanella putrefaciens CN-32 flagellar hook-associated protein FlgK YP_001184108.1 3008776 R 319224 CDS YP_001184109.1 146293685 5078278 complement(3010742..3011899) 1 NC_009438.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 3011899 flgJ 5078278 flgJ Shewanella putrefaciens CN-32 flagellar rod assembly protein/muramidase FlgJ YP_001184109.1 3010742 R 319224 CDS YP_001184110.1 146293686 5078279 complement(3011917..3013008) 1 NC_009438.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 3013008 flgI 5078279 flgI Shewanella putrefaciens CN-32 flagellar basal body P-ring protein YP_001184110.1 3011917 R 319224 CDS YP_001184111.1 146293687 5078280 complement(3013020..3013694) 1 NC_009438.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar basal body L-ring protein 3013694 flgH 5078280 flgH Shewanella putrefaciens CN-32 flagellar basal body L-ring protein YP_001184111.1 3013020 R 319224 CDS YP_001184112.1 146293688 5078281 complement(3013706..3014494) 1 NC_009438.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 3014494 flgG 5078281 flgG Shewanella putrefaciens CN-32 flagellar basal body rod protein FlgG YP_001184112.1 3013706 R 319224 CDS YP_001184113.1 146293689 5078282 complement(3014505..3015248) 1 NC_009438.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 3015248 flgF 5078282 flgF Shewanella putrefaciens CN-32 flagellar basal body rod protein FlgF YP_001184113.1 3014505 R 319224 CDS YP_001184114.1 146293690 5078283 complement(3015418..3016779) 1 NC_009438.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 3016779 flgE 5078283 flgE Shewanella putrefaciens CN-32 flagellar hook protein FlgE YP_001184114.1 3015418 R 319224 CDS YP_001184115.1 146293691 5078284 complement(3016847..3017608) 1 NC_009438.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 3017608 flgD 5078284 flgD Shewanella putrefaciens CN-32 flagellar basal body rod modification protein YP_001184115.1 3016847 R 319224 CDS YP_001184116.1 146293692 5080648 complement(3017633..3018049) 1 NC_009438.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 3018049 flgC 5080648 flgC Shewanella putrefaciens CN-32 flagellar basal body rod protein FlgC YP_001184116.1 3017633 R 319224 CDS YP_001184117.1 146293693 5080649 complement(3018052..3018456) 1 NC_009438.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgB 3018456 flgB 5080649 flgB Shewanella putrefaciens CN-32 flagellar basal body rod protein FlgB YP_001184117.1 3018052 R 319224 CDS YP_001184118.1 146293694 5080650 complement(3018601..3019440) 1 NC_009438.1 PFAM: MCP methyltransferase, CheR-type; Methyltransferase type 12; KEGG: son:SO3251 chemotaxis protein methyltransferase CheR; protein-glutamate O-methyltransferase 3019440 5080650 Sputcn32_2598 Shewanella putrefaciens CN-32 protein-glutamate O-methyltransferase YP_001184118.1 3018601 R 319224 CDS YP_001184119.1 146293695 5080651 complement(3019552..3020472) 1 NC_009438.1 PFAM: response regulator receiver; CheW domain protein; KEGG: son:SO3252 chemotaxis protein CheV; putative CheW protein 3020472 5080651 Sputcn32_2599 Shewanella putrefaciens CN-32 putative CheW protein YP_001184119.1 3019552 R 319224 CDS YP_001184120.1 146293696 5080652 3020677..3021384 1 NC_009438.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 3021384 flgA 5080652 flgA Shewanella putrefaciens CN-32 flagellar basal body P-ring biosynthesis protein FlgA YP_001184120.1 3020677 D 319224 CDS YP_001184121.1 146293697 5080653 3021458..3021781 1 NC_009438.1 PFAM: Anti-sigma-28 factor, FlgM family protein; KEGG: shm:Shewmr7_1325 anti-sigma-28 factor, FlgM; anti-sigma-28 factor FlgM 3021781 5080653 Sputcn32_2601 Shewanella putrefaciens CN-32 anti-sigma-28 factor FlgM YP_001184121.1 3021458 D 319224 CDS YP_001184122.1 146293698 5080654 3021784..3022209 1 NC_009438.1 PFAM: FlgN family protein; KEGG: shm:Shewmr7_1324 FlgN family protein; FlgN family protein 3022209 5080654 Sputcn32_2602 Shewanella putrefaciens CN-32 FlgN family protein YP_001184122.1 3021784 D 319224 CDS YP_001184123.1 146293699 5080655 complement(3022566..3023015) 1 NC_009438.1 PFAM: protein of unknown function DUF400; KEGG: son:SO3256 hypothetical protein; hypothetical protein 3023015 5080655 Sputcn32_2603 Shewanella putrefaciens CN-32 hypothetical protein YP_001184123.1 3022566 R 319224 CDS YP_001184124.1 146293700 5080656 complement(3023012..3023644) 1 NC_009438.1 KEGG: shm:Shewmr7_1322 hypothetical protein; hypothetical protein 3023644 5080656 Sputcn32_2604 Shewanella putrefaciens CN-32 hypothetical protein YP_001184124.1 3023012 R 319224 CDS YP_001184125.1 146293701 5080657 3023928..3025094 1 NC_009438.1 KEGG: she:Shewmr4_1251 hypothetical protein; hypothetical protein 3025094 5080657 Sputcn32_2605 Shewanella putrefaciens CN-32 hypothetical protein YP_001184125.1 3023928 D 319224 CDS YP_001184126.1 146293702 5080659 3025436..3026299 1 NC_009438.1 hypothetical protein 3026299 5080659 Sputcn32_2606 Shewanella putrefaciens CN-32 hypothetical protein YP_001184126.1 3025436 D 319224 CDS YP_001184127.1 146293703 5080660 3026489..3026860 1 NC_009438.1 hypothetical protein 3026860 5080660 Sputcn32_2607 Shewanella putrefaciens CN-32 hypothetical protein YP_001184127.1 3026489 D 319224 CDS YP_001184128.1 146293704 5080661 3026860..3027180 1 NC_009438.1 hypothetical protein 3027180 5080661 Sputcn32_2608 Shewanella putrefaciens CN-32 hypothetical protein YP_001184128.1 3026860 D 319224 CDS YP_001184129.1 146293705 5080662 3027173..3029095 1 NC_009438.1 PFAM: bacteriophage replication gene A; KEGG: vvy:VV1773 A protein; bacteriophage replication gene A 3029095 5080662 Sputcn32_2609 Shewanella putrefaciens CN-32 bacteriophage replication gene A YP_001184129.1 3027173 D 319224 CDS YP_001184130.1 146293706 5080663 3029179..3031413 1 NC_009438.1 KEGG: vvy:VV1770 hypothetical protein; hypothetical protein 3031413 5080663 Sputcn32_2610 Shewanella putrefaciens CN-32 hypothetical protein YP_001184130.1 3029179 D 319224 CDS YP_001184131.1 146293707 5080664 3031547..3032698 1 NC_009438.1 KEGG: vvy:VV1771 retron-type reverse transcriptase; retron-type reverse transcriptase 3032698 5080664 Sputcn32_2611 Shewanella putrefaciens CN-32 retron-type reverse transcriptase YP_001184131.1 3031547 D 319224 CDS YP_001184132.1 146293708 5080665 complement(3033201..3034532) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: pol:Bpro_2964 phage integrase; phage integrase family protein 3034532 5080665 Sputcn32_2612 Shewanella putrefaciens CN-32 phage integrase family protein YP_001184132.1 3033201 R 319224 CDS YP_001184133.1 146293709 5080666 3034766..3036055 1 NC_009438.1 KEGG: son:SO3259 hypothetical protein; hypothetical protein 3036055 5080666 Sputcn32_2613 Shewanella putrefaciens CN-32 hypothetical protein YP_001184133.1 3034766 D 319224 CDS YP_001184134.1 146293710 5080667 3036052..3036345 1 NC_009438.1 KEGG: son:SO3260 hypothetical protein; hypothetical protein 3036345 5080667 Sputcn32_2614 Shewanella putrefaciens CN-32 hypothetical protein YP_001184134.1 3036052 D 319224 CDS YP_001184135.1 146293711 5080668 complement(3036394..3037020) 1 NC_009438.1 KEGG: pau:PA14_50310 possible sugar nucleotidyltransferase; putative sugar nucleotidyltransferase 3037020 5080668 Sputcn32_2615 Shewanella putrefaciens CN-32 putative sugar nucleotidyltransferase YP_001184135.1 3036394 R 319224 CDS YP_001184136.1 146293712 5080669 complement(3037017..3037616) 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pau:PA14_50320 hypothetical protein; HAD family hydrolase 3037616 5080669 Sputcn32_2616 Shewanella putrefaciens CN-32 HAD family hydrolase YP_001184136.1 3037017 R 319224 CDS YP_001184137.1 146293713 5080670 complement(3037626..3038366) 1 NC_009438.1 PFAM: Methyltransferase type 12; KEGG: pau:PA14_50330 hypothetical protein; type 12 methyltransferase 3038366 5080670 Sputcn32_2617 Shewanella putrefaciens CN-32 type 12 methyltransferase YP_001184137.1 3037626 R 319224 CDS YP_001184138.1 146293714 5080671 complement(3038382..3039227) 1 NC_009438.1 KEGG: bfr:BF2579 putative cholinephosphotransferase; hypothetical protein 3039227 5080671 Sputcn32_2618 Shewanella putrefaciens CN-32 hypothetical protein YP_001184138.1 3038382 R 319224 CDS YP_001184139.1 146293715 5080672 complement(3039220..3040410) 1 NC_009438.1 KEGG: sus:Acid_1365 hypothetical protein; hypothetical protein 3040410 5080672 Sputcn32_2619 Shewanella putrefaciens CN-32 hypothetical protein YP_001184139.1 3039220 R 319224 CDS YP_001184140.1 146293716 5080673 complement(3040389..3041444) 1 NC_009438.1 PFAM: acyl-protein synthetase, LuxE; KEGG: sus:Acid_1364 acyl-protein synthetase, LuxE; acyl-protein synthetase, LuxE 3041444 5080673 Sputcn32_2620 Shewanella putrefaciens CN-32 acyl-protein synthetase, LuxE YP_001184140.1 3040389 R 319224 CDS YP_001184141.1 146293717 5080674 complement(3041441..3042802) 1 NC_009438.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro07030 possible acyl-CoA synthetase; AMP-dependent synthetase and ligase 3042802 5080674 Sputcn32_2621 Shewanella putrefaciens CN-32 AMP-dependent synthetase and ligase YP_001184141.1 3041441 R 319224 CDS YP_001184142.1 146293718 5080675 complement(3042835..3043581) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: sus:Acid_1362 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3043581 5080675 Sputcn32_2622 Shewanella putrefaciens CN-32 short-chain dehydrogenase/reductase SDR YP_001184142.1 3042835 R 319224 CDS YP_001184143.1 146293719 5080676 complement(3043581..3043811) 1 NC_009438.1 KEGG: sus:Acid_1361 acyl carrier protein; acyl carrier protein 3043811 5080676 Sputcn32_2623 Shewanella putrefaciens CN-32 acyl carrier protein YP_001184143.1 3043581 R 319224 CDS YP_001184144.1 146293720 5080677 complement(3043808..3044407) 1 NC_009438.1 KEGG: sus:Acid_6945 GCN5-related N-acetyltransferase; hypothetical protein 3044407 5080677 Sputcn32_2624 Shewanella putrefaciens CN-32 hypothetical protein YP_001184144.1 3043808 R 319224 CDS YP_001184145.1 146293721 5080678 complement(3044389..3045438) 1 NC_009438.1 PFAM: N-acetylneuraminic acid synthase, N-terminal domain; SAF domain; KEGG: pfl:PFL_1625 NeuB family protein; N-acylneuraminate-9-phosphate synthase 3045438 5080678 Sputcn32_2625 Shewanella putrefaciens CN-32 N-acylneuraminate-9-phosphate synthase YP_001184145.1 3044389 R 319224 CDS YP_001184146.1 146293722 5080679 complement(3045442..3046557) 1 NC_009438.1 KEGG: pfl:PFL_1624 FlaR protein (FlaR); FlaR protein (FlaR) 3046557 5080679 Sputcn32_2626 Shewanella putrefaciens CN-32 FlaR protein (FlaR) YP_001184146.1 3045442 R 319224 CDS YP_001184147.1 146293723 5080680 complement(3046554..3047258) 1 NC_009438.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: par:Psyc_0656 putative acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 3047258 5080680 Sputcn32_2627 Shewanella putrefaciens CN-32 acylneuraminate cytidylyltransferase YP_001184147.1 3046554 R 319224 CDS YP_001184148.1 146293724 5080681 complement(3047255..3048403) 1 NC_009438.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: son:SO3270 polysaccharide biosynthesis protein; DegT/DnrJ/EryC1/StrS aminotransferase 3048403 5080681 Sputcn32_2628 Shewanella putrefaciens CN-32 DegT/DnrJ/EryC1/StrS aminotransferase YP_001184148.1 3047255 R 319224 CDS YP_001184149.1 146293725 5080682 complement(3048400..3049395) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: son:SO3271 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 3049395 5080682 Sputcn32_2629 Shewanella putrefaciens CN-32 polysaccharide biosynthesis protein CapD YP_001184149.1 3048400 R 319224 CDS YP_001184150.1 146293726 5080683 3049776..3052241 1 NC_009438.1 PFAM: protein of unknown function DUF115; KEGG: son:SO3273 hypothetical protein; hypothetical protein 3052241 5080683 Sputcn32_2630 Shewanella putrefaciens CN-32 hypothetical protein YP_001184150.1 3049776 D 319224 CDS YP_001184151.1 146293727 5080684 3052357..3052836 1 NC_009438.1 KEGG: shm:Shewmr7_1320 hypothetical protein; hypothetical protein 3052836 5080684 Sputcn32_2631 Shewanella putrefaciens CN-32 hypothetical protein YP_001184151.1 3052357 D 319224 CDS YP_001184152.1 146293728 5080685 3052875..3053435 1 NC_009438.1 KEGG: shm:Shewmr7_1319 hypothetical protein; hypothetical protein 3053435 5080685 Sputcn32_2632 Shewanella putrefaciens CN-32 hypothetical protein YP_001184152.1 3052875 D 319224 CDS YP_001184153.1 146293729 5080686 complement(3053454..3054398) 1 NC_009438.1 KEGG: she:Shewmr4_1248 hypothetical protein; hypothetical protein 3054398 5080686 Sputcn32_2633 Shewanella putrefaciens CN-32 hypothetical protein YP_001184153.1 3053454 R 319224 CDS YP_001184154.1 146293730 5080687 complement(3054516..3055145) 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_1317 transcriptional regulator, TetR family; TetR family transcriptional regulator 3055145 5080687 Sputcn32_2634 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001184154.1 3054516 R 319224 CDS YP_001184155.1 146293731 5080688 3055284..3056396 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO3278 hypothetical protein; RND family efflux transporter MFP subunit 3056396 5080688 Sputcn32_2635 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184155.1 3055284 D 319224 CDS YP_001184156.1 146293732 5080689 3056396..3059473 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: she:Shewmr4_1245 acriflavin resistance protein; acriflavin resistance protein 3059473 5080689 Sputcn32_2636 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001184156.1 3056396 D 319224 CDS YP_001184157.1 146293733 5080690 3059699..3061702 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_1243 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3061702 5080690 Sputcn32_2637 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184157.1 3059699 D 319224 CDS YP_001184158.1 146293734 5080691 complement(3061769..3062005) 1 NC_009438.1 KEGG: she:Shewmr4_1960 hypothetical protein; hypothetical protein 3062005 5080691 Sputcn32_2638 Shewanella putrefaciens CN-32 hypothetical protein YP_001184158.1 3061769 R 319224 CDS YP_001184159.1 146293735 5080692 complement(3062210..3062326) 1 NC_009438.1 TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; KEGG: shm:Shewmr7_1312 cyd operon protein YbgT; cyd operon protein YbgT 3062326 5080692 Sputcn32_2639 Shewanella putrefaciens CN-32 cyd operon protein YbgT YP_001184159.1 3062210 R 319224 CDS YP_001184160.1 146293736 5080693 complement(3062356..3063495) 1 NC_009438.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase, subunit II; KEGG: son:SO3285 cytochrome bd-I oxidase subunit II; cytochrome d ubiquinol oxidase subunit II 3063495 5080693 Sputcn32_2640 Shewanella putrefaciens CN-32 cytochrome d ubiquinol oxidase subunit II YP_001184160.1 3062356 R 319224 CDS YP_001184161.1 146293737 5080694 complement(3063511..3065067) 1 NC_009438.1 PFAM: cytochrome bd ubiquinol oxidase, subunit I; KEGG: shm:Shewmr7_1310 cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 3065067 5080694 Sputcn32_2641 Shewanella putrefaciens CN-32 cytochrome bd ubiquinol oxidase subunit I YP_001184161.1 3063511 R 319224 CDS YP_001184162.1 146293738 5080695 complement(3066311..3070192) 1 NC_009438.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 3070192 5080695 Sputcn32_2642 Shewanella putrefaciens CN-32 phosphoribosylformylglycinamidine synthase YP_001184162.1 3066311 R 319224 CDS YP_001184163.1 146293739 5080696 3070471..3071904 1 NC_009438.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 3071904 5080696 Sputcn32_2643 Shewanella putrefaciens CN-32 putative transglycosylase YP_001184163.1 3070471 D 319224 CDS YP_001184164.1 146293740 5080697 complement(3072362..3072856) 1 NC_009438.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: she:Shewmr4_1236 CMP/dCMP deaminase, zinc-binding; zinc-binding CMP/dCMP deaminase 3072856 5080697 Sputcn32_2644 Shewanella putrefaciens CN-32 zinc-binding CMP/dCMP deaminase YP_001184164.1 3072362 R 319224 CDS YP_001184165.1 146293741 5079956 complement(3073023..3074600) 1 NC_009438.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3074600 guaA 5079956 guaA Shewanella putrefaciens CN-32 GMP synthase YP_001184165.1 3073023 R 319224 CDS YP_001184166.1 146293742 5079957 complement(3074718..3076184) 1 NC_009438.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3076184 5079957 Sputcn32_2646 Shewanella putrefaciens CN-32 inosine 5'-monophosphate dehydrogenase YP_001184166.1 3074718 R 319224 CDS YP_001184167.1 146293743 5079958 3076251..3077651 1 NC_009438.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3077651 xseA 5079958 xseA Shewanella putrefaciens CN-32 exodeoxyribonuclease VII large subunit YP_001184167.1 3076251 D 319224 CDS YP_001184168.1 146293744 5079959 complement(3077734..3079200) 1 NC_009438.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3079200 engA 5079959 engA Shewanella putrefaciens CN-32 GTP-binding protein EngA YP_001184168.1 3077734 R 319224 CDS YP_001184169.1 146293745 5079960 complement(3079280..3080467) 1 NC_009438.1 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 3080467 5079960 Sputcn32_2649 Shewanella putrefaciens CN-32 outer membrane protein assembly complex subunit YfgL YP_001184169.1 3079280 R 319224 CDS YP_001184170.1 146293746 5079961 complement(3080479..3081099) 1 NC_009438.1 KEGG: shm:Shewmr7_1301 hypothetical protein; hypothetical protein 3081099 5079961 Sputcn32_2650 Shewanella putrefaciens CN-32 hypothetical protein YP_001184170.1 3080479 R 319224 CDS YP_001184171.1 146293747 5079962 complement(3081113..3082390) 1 NC_009438.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3082390 hisS 5079962 hisS Shewanella putrefaciens CN-32 histidyl-tRNA synthetase YP_001184171.1 3081113 R 319224 CDS YP_001184172.1 146293748 5079963 complement(3082521..3083636) 1 NC_009438.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3083636 ispG 5079963 ispG Shewanella putrefaciens CN-32 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_001184172.1 3082521 R 319224 CDS YP_001184173.1 146293749 5079964 complement(3083686..3084771) 1 NC_009438.1 KEGG: she:Shewmr4_1227 hypothetical protein; hypothetical protein 3084771 5079964 Sputcn32_2653 Shewanella putrefaciens CN-32 hypothetical protein YP_001184173.1 3083686 R 319224 CDS YP_001184174.1 146293750 5079965 complement(3084768..3085556) 1 NC_009438.1 KEGG: she:Shewmr4_1226 type IV pilus biogenesis/stability protein PilW; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 3085556 5079965 Sputcn32_2654 Shewanella putrefaciens CN-32 type IV pilus biogenesis/stability protein PilW YP_001184174.1 3084768 R 319224 CDS YP_001184175.1 146293751 5079966 complement(3085589..3086710) 1 NC_009438.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 3086710 5079966 Sputcn32_2655 Shewanella putrefaciens CN-32 ribosomal RNA large subunit methyltransferase N YP_001184175.1 3085589 R 319224 CDS YP_001184176.1 146293752 5079967 3086855..3087946 1 NC_009438.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; KEGG: shm:Shewmr7_1295 protein of unknown function DUF21; hypothetical protein 3087946 5079967 Sputcn32_2656 Shewanella putrefaciens CN-32 hypothetical protein YP_001184176.1 3086855 D 319224 CDS YP_001184177.1 146293753 5079968 3088086..3089831 1 NC_009438.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: shm:Shewmr7_1294 metallophosphoesterase; 5'-nucleotidase domain-containing protein 3089831 5079968 Sputcn32_2657 Shewanella putrefaciens CN-32 5'-nucleotidase domain-containing protein YP_001184177.1 3088086 D 319224 CDS YP_001184178.1 146293754 5079969 complement(3089861..3090754) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: she:Shewmr4_1222 transcriptional regulator, LysR family; LysR family transcriptional regulator 3090754 5079969 Sputcn32_2658 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184178.1 3089861 R 319224 CDS YP_001184179.1 146293755 5079972 complement(3093430..3094464) 1 NC_009438.1 PFAM: transposase, IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: son:SO4548 transposase, IS110 family; transposase IS116/IS110/IS902 family protein 3094464 5079972 Sputcn32_2661 Shewanella putrefaciens CN-32 transposase IS116/IS110/IS902 family protein YP_001184179.1 3093430 R 319224 CDS YP_001184180.1 146293756 5079973 3094659..3095183 1 NC_009438.1 KEGG: net:Neut_0366 hypothetical protein; hypothetical protein 3095183 5079973 Sputcn32_2662 Shewanella putrefaciens CN-32 hypothetical protein YP_001184180.1 3094659 D 319224 CDS YP_001184181.1 146293757 5079974 3095190..3095546 1 NC_009438.1 KEGG: shm:Shewmr7_1292 DoxX family protein; DoxX family protein 3095546 5079974 Sputcn32_2663 Shewanella putrefaciens CN-32 DoxX family protein YP_001184181.1 3095190 D 319224 CDS YP_001184182.1 146293758 5079975 3095558..3096253 1 NC_009438.1 PFAM: Pirin domain protein domain protein; Cupin 2, conserved barrel domain protein; KEGG: shm:Shewmr7_1291 pirin domain protein domain protein; pirin domain-containing protein 3096253 5079975 Sputcn32_2664 Shewanella putrefaciens CN-32 pirin domain-containing protein YP_001184182.1 3095558 D 319224 CDS YP_001184183.1 146293759 5079976 complement(3096382..3096915) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_1219 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3096915 5079976 Sputcn32_2665 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184183.1 3096382 R 319224 CDS YP_001184184.1 146293760 5079977 complement(3096976..3097488) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_1289 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3097488 5079977 Sputcn32_2666 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184184.1 3096976 R 319224 CDS YP_001184185.1 146293761 5079978 complement(3097658..3097960) 1 NC_009438.1 KEGG: shm:Shewmr7_1288 NrfJ-related protein; NrfJ-like protein 3097960 5079978 Sputcn32_2667 Shewanella putrefaciens CN-32 NrfJ-like protein YP_001184185.1 3097658 R 319224 CDS YP_001184186.1 146293762 5079979 complement(3098087..3098296) 1 NC_009438.1 KEGG: she:Shewmr4_1216 hypothetical protein; hypothetical protein 3098296 5079979 Sputcn32_2668 Shewanella putrefaciens CN-32 hypothetical protein YP_001184186.1 3098087 R 319224 CDS YP_001184187.1 146293763 5079980 complement(3098454..3098912) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO3328 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3098912 5079980 Sputcn32_2669 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184187.1 3098454 R 319224 CDS YP_001184188.1 146293764 5079981 3099204..3100652 1 NC_009438.1 PFAM: extracellular solute-binding protein, family 1; KEGG: she:Shewmr4_1212 extracellular solute-binding protein, family 1; extracellular solute-binding protein 3100652 5079981 Sputcn32_2670 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001184188.1 3099204 D 319224 CDS YP_001184189.1 146293765 5079982 3100649..3102385 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: son:SO3334 GGDEF family protein; diguanylate cyclase 3102385 5079982 Sputcn32_2671 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001184189.1 3100649 D 319224 CDS YP_001184190.1 146293766 5079983 3102486..3103310 1 NC_009438.1 PFAM: protein of unknown function DUF980; KEGG: she:Shewmr4_1210 protein of unknown function DUF980; hypothetical protein 3103310 5079983 Sputcn32_2672 Shewanella putrefaciens CN-32 hypothetical protein YP_001184190.1 3102486 D 319224 CDS YP_001184191.1 146293767 5079984 complement(3103713..3104726) 1 NC_009438.1 PFAM: aminotransferase, class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: she:Shewmr4_1207 threonine aldolase; threonine aldolase 3104726 5079984 Sputcn32_2673 Shewanella putrefaciens CN-32 threonine aldolase YP_001184191.1 3103713 R 319224 CDS YP_001184192.1 146293768 5079985 3105051..3105641 1 NC_009438.1 PFAM: OmpA/MotB domain protein; KEGG: son:SO3339 OmpA family protein; OmpA/MotB domain-containing protein 3105641 5079985 Sputcn32_2674 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001184192.1 3105051 D 319224 CDS YP_001184193.1 146293769 5079986 3105676..3106503 1 NC_009438.1 PFAM: MscS Mechanosensitive ion channel; KEGG: shm:Shewmr7_1276 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 3106503 5079986 Sputcn32_2675 Shewanella putrefaciens CN-32 mechanosensitive ion channel protein MscS YP_001184193.1 3105676 D 319224 CDS YP_001184194.1 146293770 5079987 3106613..3107206 1 NC_009438.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shm:Shewmr7_1275 redoxin domain protein; redoxin domain-containing protein 3107206 5079987 Sputcn32_2676 Shewanella putrefaciens CN-32 redoxin domain-containing protein YP_001184194.1 3106613 D 319224 CDS YP_001184195.1 146293771 5079988 complement(3107254..3107907) 1 NC_009438.1 PFAM: protein of unknown function UPF0126; KEGG: shm:Shewmr7_1274 protein of unknown function UPF0126; hypothetical protein 3107907 5079988 Sputcn32_2677 Shewanella putrefaciens CN-32 hypothetical protein YP_001184195.1 3107254 R 319224 CDS YP_001184196.1 146293772 5079989 complement(3108238..3108798) 1 NC_009438.1 KEGG: son:SO3343 hypothetical protein; hypothetical protein 3108798 5079989 Sputcn32_2678 Shewanella putrefaciens CN-32 hypothetical protein YP_001184196.1 3108238 R 319224 CDS YP_001184197.1 146293773 5079990 3108977..3109291 1 NC_009438.1 KEGG: shm:Shewmr7_1272 hypothetical protein; hypothetical protein 3109291 5079990 Sputcn32_2679 Shewanella putrefaciens CN-32 hypothetical protein YP_001184197.1 3108977 D 319224 CDS YP_001184198.1 146293774 5079991 3109457..3109786 1 NC_009438.1 involved in start site selection during the initiation of translation; translation initiation factor Sui1 3109786 5079991 Sputcn32_2680 Shewanella putrefaciens CN-32 translation initiation factor Sui1 YP_001184198.1 3109457 D 319224 CDS YP_001184199.1 146293775 5079992 3109899..3110462 1 NC_009438.1 PFAM: protein of unknown function DUF179; KEGG: son:SO3346 putative transcriptional regulator; hypothetical protein 3110462 5079992 Sputcn32_2681 Shewanella putrefaciens CN-32 hypothetical protein YP_001184199.1 3109899 D 319224 CDS YP_001184200.1 146293776 5079993 3110494..3110919 1 NC_009438.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 3110919 5079993 Sputcn32_2682 Shewanella putrefaciens CN-32 Holliday junction resolvase-like protein YP_001184200.1 3110494 D 319224 CDS YP_001184201.1 146293777 5079994 complement(3110981..3111994) 1 NC_009438.1 PFAM: ferrochelatase; KEGG: shm:Shewmr7_1268 ferrochelatase; ferrochelatase 3111994 5079994 Sputcn32_2683 Shewanella putrefaciens CN-32 ferrochelatase YP_001184201.1 3110981 R 319224 CDS YP_001184202.1 146293778 5079995 complement(3112027..3112566) 1 NC_009438.1 PFAM: glutathione peroxidase; KEGG: shm:Shewmr7_1267 glutathione peroxidase; glutathione peroxidase 3112566 5079995 Sputcn32_2684 Shewanella putrefaciens CN-32 glutathione peroxidase YP_001184202.1 3112027 R 319224 CDS YP_001184203.1 146293779 5079996 complement(3112705..3113817) 1 NC_009438.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: shm:Shewmr7_1266 twitching motility protein; twitching motility protein 3113817 5079996 Sputcn32_2685 Shewanella putrefaciens CN-32 twitching motility protein YP_001184203.1 3112705 R 319224 CDS YP_001184204.1 146293780 5079997 complement(3113827..3114864) 1 NC_009438.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: son:SO3351 twitching motility protein PilT; twitching motility protein 3114864 5079997 Sputcn32_2686 Shewanella putrefaciens CN-32 twitching motility protein YP_001184204.1 3113827 R 319224 CDS YP_001184205.1 146293781 5079998 3114900..3115598 1 NC_009438.1 PFAM: alanine racemase domain protein; KEGG: shm:Shewmr7_1264 protein of unknown function UPF0001; alanine racemase domain-containing protein 3115598 5079998 Sputcn32_2687 Shewanella putrefaciens CN-32 alanine racemase domain-containing protein YP_001184205.1 3114900 D 319224 CDS YP_001184206.1 146293782 5079999 3115779..3116597 1 NC_009438.1 KEGG: son:SO3354 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; pyrroline-5-carboxylate reductase 3116597 5079999 Sputcn32_2688 Shewanella putrefaciens CN-32 pyrroline-5-carboxylate reductase YP_001184206.1 3115779 D 319224 CDS YP_001184207.1 146293783 5080000 3116644..3117192 1 NC_009438.1 PFAM: protein of unknown function YGGT; KEGG: she:Shewmr4_1191 protein of unknown function YGGT; hypothetical protein 3117192 5080000 Sputcn32_2689 Shewanella putrefaciens CN-32 hypothetical protein YP_001184207.1 3116644 D 319224 CDS YP_001184208.1 146293784 5080001 3117192..3117482 1 NC_009438.1 PFAM: protein of unknown function DUF167; KEGG: son:SO3356 hypothetical protein; hypothetical protein 3117482 5080001 Sputcn32_2690 Shewanella putrefaciens CN-32 hypothetical protein YP_001184208.1 3117192 D 319224 CDS YP_001184209.1 146293785 5080002 3117560..3117994 1 NC_009438.1 KEGG: shm:Shewmr7_1260 hypothetical protein; hypothetical protein 3117994 5080002 Sputcn32_2691 Shewanella putrefaciens CN-32 hypothetical protein YP_001184209.1 3117560 D 319224 CDS YP_001184210.1 146293786 5080003 3118105..3118722 1 NC_009438.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 3118722 5080003 Sputcn32_2692 Shewanella putrefaciens CN-32 putative deoxyribonucleotide triphosphate pyrophosphatase YP_001184210.1 3118105 D 319224 CDS YP_001184211.1 146293787 5080004 3118722..3119885 1 NC_009438.1 KEGG: she:Shewmr4_1187 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; putative oxygen-independent coproporphyrinogen III oxidase 3119885 5080004 Sputcn32_2693 Shewanella putrefaciens CN-32 putative oxygen-independent coproporphyrinogen III oxidase YP_001184211.1 3118722 D 319224 CDS YP_001184212.1 146293788 5080005 3120039..3121925 1 NC_009438.1 PFAM: protein of unknown function DUF885; KEGG: she:Shewmr4_1186 protein of unknown function DUF885; hypothetical protein 3121925 5080005 Sputcn32_2694 Shewanella putrefaciens CN-32 hypothetical protein YP_001184212.1 3120039 D 319224 CDS YP_001184213.1 146293789 5080006 complement(3122585..3123598) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_1256 transcriptional regulator, LysR family; LysR family transcriptional regulator 3123598 5080006 Sputcn32_2695 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184213.1 3122585 R 319224 CDS YP_001184214.1 146293790 5079907 complement(3123911..3124732) 1 NC_009438.1 KEGG: shm:Shewmr7_1255 hypothetical protein; hypothetical protein 3124732 5079907 Sputcn32_2696 Shewanella putrefaciens CN-32 hypothetical protein YP_001184214.1 3123911 R 319224 CDS YP_001184215.1 146293791 5079908 complement(3124913..3125827) 1 NC_009438.1 catalyzes the formation of glutamate from glutamine; glutaminase 3125827 5079908 Sputcn32_2697 Shewanella putrefaciens CN-32 glutaminase YP_001184215.1 3124913 R 319224 CDS YP_001184216.1 146293792 5079909 complement(3125827..3126153) 1 NC_009438.1 PFAM: protein of unknown function DUF469; KEGG: son:SO3366 hypothetical protein; hypothetical protein 3126153 5079909 Sputcn32_2698 Shewanella putrefaciens CN-32 hypothetical protein YP_001184216.1 3125827 R 319224 CDS YP_001184217.1 146293793 5079910 complement(3126202..3126918) 1 NC_009438.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 3126918 trmB 5079910 trmB Shewanella putrefaciens CN-32 tRNA (guanine-N(7)-)-methyltransferase YP_001184217.1 3126202 R 319224 CDS YP_001184218.1 146293794 5079911 3127119..3128207 1 NC_009438.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: shm:Shewmr7_1251 A/G-specific adenine glycosylase; A/G-specific adenine glycosylase 3128207 5079911 Sputcn32_2700 Shewanella putrefaciens CN-32 A/G-specific adenine glycosylase YP_001184218.1 3127119 D 319224 CDS YP_001184219.1 146293795 5079912 3128210..3128488 1 NC_009438.1 PFAM: Fe(II) trafficking protein YggX; KEGG: son:SO3369 hypothetical protein; hypothetical protein 3128488 5079912 Sputcn32_2701 Shewanella putrefaciens CN-32 hypothetical protein YP_001184219.1 3128210 D 319224 CDS YP_001184220.1 146293796 5079913 complement(3128577..3129152) 1 NC_009438.1 PFAM: YceI family protein; KEGG: son:SO3370 hypothetical protein; hypothetical protein 3129152 5079913 Sputcn32_2702 Shewanella putrefaciens CN-32 hypothetical protein YP_001184220.1 3128577 R 319224 CDS YP_001184221.1 146293797 5079914 complement(3129157..3129708) 1 NC_009438.1 PFAM: cytochrome B561; KEGG: she:Shewmr4_1177 cytochrome b561; cytochrome B561 3129708 5079914 Sputcn32_2703 Shewanella putrefaciens CN-32 cytochrome B561 YP_001184221.1 3129157 R 319224 CDS YP_001184222.1 146293798 5079919 complement(3131154..3131339) 1 NC_009438.1 KEGG: shm:Shewmr7_1247 hypothetical protein; hypothetical protein 3131339 5079919 Sputcn32_2704 Shewanella putrefaciens CN-32 hypothetical protein YP_001184222.1 3131154 R 319224 CDS YP_001184223.1 146293799 5079920 3131494..3131838 1 NC_009438.1 KEGG: son:SO3374 hypothetical protein; hypothetical protein 3131838 5079920 Sputcn32_2705 Shewanella putrefaciens CN-32 hypothetical protein YP_001184223.1 3131494 D 319224 CDS YP_001184224.1 146293800 5079921 complement(3131959..3132504) 1 NC_009438.1 KEGG: shm:Shewmr7_1244 hypothetical protein; hypothetical protein 3132504 5079921 Sputcn32_2706 Shewanella putrefaciens CN-32 hypothetical protein YP_001184224.1 3131959 R 319224 CDS YP_001184225.1 146293801 5079922 complement(3132492..3133064) 1 NC_009438.1 KEGG: son:SO3377 hypothetical protein; hypothetical protein 3133064 5079922 Sputcn32_2707 Shewanella putrefaciens CN-32 hypothetical protein YP_001184225.1 3132492 R 319224 CDS YP_001184226.1 146293802 5079923 complement(3133068..3133721) 1 NC_009438.1 KEGG: son:SO3378 hypothetical protein; hypothetical protein 3133721 5079923 Sputcn32_2708 Shewanella putrefaciens CN-32 hypothetical protein YP_001184226.1 3133068 R 319224 CDS YP_001184227.1 146293803 5079924 complement(3133722..3134975) 1 NC_009438.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO3379 cyclopropane-fatty-acyl-phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase 3134975 5079924 Sputcn32_2709 Shewanella putrefaciens CN-32 cyclopropane-fatty-acyl-phospholipid synthase YP_001184227.1 3133722 R 319224 CDS YP_001184228.1 146293804 5079925 complement(3134977..3135786) 1 NC_009438.1 PFAM: protein of unknown function DUF1365; KEGG: she:Shewmr4_1169 protein of unknown function DUF1365; hypothetical protein 3135786 5079925 Sputcn32_2710 Shewanella putrefaciens CN-32 hypothetical protein YP_001184228.1 3134977 R 319224 CDS YP_001184229.1 146293805 5079926 complement(3135783..3137033) 1 NC_009438.1 PFAM: amine oxidase; KEGG: shm:Shewmr7_1239 amine oxidase; amine oxidase 3137033 5079926 Sputcn32_2711 Shewanella putrefaciens CN-32 amine oxidase YP_001184229.1 3135783 R 319224 CDS YP_001184230.1 146293806 5079927 complement(3137030..3137857) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: she:Shewmr4_1167 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3137857 5079927 Sputcn32_2712 Shewanella putrefaciens CN-32 short-chain dehydrogenase/reductase SDR YP_001184230.1 3137030 R 319224 CDS YP_001184231.1 146293807 5079928 complement(3137857..3138294) 1 NC_009438.1 KEGG: shm:Shewmr7_1237 transcriptional regulator-related protein; transcriptional regulator-like protein 3138294 5079928 Sputcn32_2713 Shewanella putrefaciens CN-32 transcriptional regulator-like protein YP_001184231.1 3137857 R 319224 CDS YP_001184232.1 146293808 5079929 complement(3138320..3139801) 1 NC_009438.1 PFAM: DNA photolyase, FAD-binding; DNA photolyase domain protein; KEGG: son:SO3384 deoxyribodipyrimidine photolyase; deoxyribodipyrimidine photo-lyase 3139801 5079929 Sputcn32_2714 Shewanella putrefaciens CN-32 deoxyribodipyrimidine photo-lyase YP_001184232.1 3138320 R 319224 CDS YP_001184233.1 146293809 5079930 complement(3139839..3140819) 1 NC_009438.1 PFAM: regulatory protein, MerR; KEGG: son:SO3385 transcriptional regulator, MerR family; MerR family transcriptional regulator 3140819 5079930 Sputcn32_2715 Shewanella putrefaciens CN-32 MerR family transcriptional regulator YP_001184233.1 3139839 R 319224 CDS YP_001184234.1 146293810 5079931 complement(3140862..3141815) 1 NC_009438.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: shm:Shewmr7_1234 protein of unknown function DUF1722; hypothetical protein 3141815 5079931 Sputcn32_2716 Shewanella putrefaciens CN-32 hypothetical protein YP_001184234.1 3140862 R 319224 CDS YP_001184235.1 146293811 5079932 3142001..3142504 1 NC_009438.1 KEGG: she:Shewmr4_1162 hypothetical protein; hypothetical protein 3142504 5079932 Sputcn32_2717 Shewanella putrefaciens CN-32 hypothetical protein YP_001184235.1 3142001 D 319224 CDS YP_001184236.1 146293812 5079933 complement(3142613..3143854) 1 NC_009438.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: son:SO3388 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase 3143854 5079933 Sputcn32_2718 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001184236.1 3142613 R 319224 CDS YP_001184237.1 146293813 5079934 3144164..3146596 1 NC_009438.1 KEGG: shm:Shewmr7_1230 peptidase S16, lon domain protein; peptidase S16, lon domain-containing protein 3146596 5079934 Sputcn32_2719 Shewanella putrefaciens CN-32 peptidase S16, lon domain-containing protein YP_001184237.1 3144164 D 319224 CDS YP_001184238.1 146293814 5079935 complement(3146687..3147754) 1 NC_009438.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: shm:Shewmr7_1229 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase 3147754 5079935 Sputcn32_2720 Shewanella putrefaciens CN-32 NADH:flavin oxidoreductase YP_001184238.1 3146687 R 319224 CDS YP_001184239.1 146293815 5079936 3147888..3148469 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_1228 transcriptional regulator, TetR family; TetR family transcriptional regulator 3148469 5079936 Sputcn32_2721 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001184239.1 3147888 D 319224 CDS YP_001184240.1 146293816 5079937 complement(3148537..3148776) 1 NC_009438.1 KEGG: shm:Shewmr7_1227 hypothetical protein; hypothetical protein 3148776 5079937 Sputcn32_2722 Shewanella putrefaciens CN-32 hypothetical protein YP_001184240.1 3148537 R 319224 CDS YP_001184241.1 146293817 5079938 complement(3149096..3150664) 1 NC_009438.1 PFAM: chemotaxis sensory transducer; KEGG: shm:Shewmr7_1226 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3150664 5079938 Sputcn32_2723 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184241.1 3149096 R 319224 CDS YP_001184242.1 146293818 5079939 3151086..3151808 1 NC_009438.1 PFAM: protein of unknown function DUF28; KEGG: son:SO3401 hypothetical protein; hypothetical protein 3151808 5079939 Sputcn32_2724 Shewanella putrefaciens CN-32 hypothetical protein YP_001184242.1 3151086 D 319224 CDS YP_001184243.1 146293819 5079940 complement(3151902..3152258) 1 NC_009438.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: shm:Shewmr7_1221 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 3152258 5079940 Sputcn32_2725 Shewanella putrefaciens CN-32 sigma 54 modulation protein/ribosomal protein S30EA YP_001184243.1 3151902 R 319224 CDS YP_001184244.1 146293820 5079941 complement(3152500..3154116) 1 NC_009438.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: she:Shewmr4_1149 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer 3154116 5079941 Sputcn32_2726 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184244.1 3152500 R 319224 CDS YP_001184245.1 146293821 5079942 3154539..3154907 1 NC_009438.1 KEGG: shm:Shewmr7_1219 hypothetical protein; hypothetical protein 3154907 5079942 Sputcn32_2727 Shewanella putrefaciens CN-32 hypothetical protein YP_001184245.1 3154539 D 319224 CDS YP_001184246.1 146293822 5079943 3154912..3156576 1 NC_009438.1 PFAM: PepSY-associated TM helix domain protein; KEGG: son:SO3407 hypothetical protein; PepSY-associated TM helix domain-containing protein 3156576 5079943 Sputcn32_2728 Shewanella putrefaciens CN-32 PepSY-associated TM helix domain-containing protein YP_001184246.1 3154912 D 319224 CDS YP_001184247.1 146293823 5079944 3156573..3156929 1 NC_009438.1 KEGG: she:Shewmr4_1146 hypothetical protein; hypothetical protein 3156929 5079944 Sputcn32_2729 Shewanella putrefaciens CN-32 hypothetical protein YP_001184247.1 3156573 D 319224 CDS YP_001184248.1 146293824 5079945 3157126..3157563 1 NC_009438.1 PFAM: OsmC family protein; KEGG: son:SO3409 OsmC/Ohr family protein; OsmC family protein 3157563 5079945 Sputcn32_2730 Shewanella putrefaciens CN-32 OsmC family protein YP_001184248.1 3157126 D 319224 CDS YP_001184249.1 146293825 5079946 complement(3157686..3160970) 1 NC_009438.1 PFAM: peptidase S41; WD40 domain protein beta Propeller; SMART: PDZ/DHR/GLGF domain protein; KEGG: son:SO3411 protease, putative; peptidase S41 3160970 5079946 Sputcn32_2731 Shewanella putrefaciens CN-32 peptidase S41 YP_001184249.1 3157686 R 319224 CDS YP_001184250.1 146293826 5079947 complement(3161246..3162100) 1 NC_009438.1 SMART: extracellular solute-binding protein, family 3; KEGG: son:SO3412 extracellular solute-binding proteins, family 3 protein; extracellular solute-binding protein 3162100 5079947 Sputcn32_2732 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001184250.1 3161246 R 319224 CDS YP_001184251.1 146293827 5079948 complement(3162324..3163607) 1 NC_009438.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 3163607 5079948 Sputcn32_2733 Shewanella putrefaciens CN-32 threonine synthase YP_001184251.1 3162324 R 319224 CDS YP_001184252.1 146293828 5079949 complement(3163678..3164640) 1 NC_009438.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 3164640 5079949 Sputcn32_2734 Shewanella putrefaciens CN-32 homoserine kinase YP_001184252.1 3163678 R 319224 CDS YP_001184253.1 146293829 5079950 complement(3164637..3167105) 1 NC_009438.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 3167105 thrA 5079950 thrA Shewanella putrefaciens CN-32 bifunctional aspartokinase I/homoserine dehydrogenase I YP_001184253.1 3164637 R 319224 CDS YP_001184254.1 146293830 5079951 3167747..3168403 1 NC_009438.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO3417 peptidyl-prolyl cis-trans isomerase SlyD; peptidylprolyl isomerase, FKBP-type 3168403 5079951 Sputcn32_2736 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001184254.1 3167747 D 319224 CDS YP_001184255.1 146293831 5079952 complement(3168550..3168825) 1 NC_009438.1 TIGRFAM: trp operon repressor; PFAM: Trp repressor; KEGG: son:SO3419 trp operon repressor; Trp operon repressor 3168825 5079952 Sputcn32_2737 Shewanella putrefaciens CN-32 Trp operon repressor YP_001184255.1 3168550 R 319224 CDS YP_001184256.1 146293832 5079953 3169014..3169463 1 NC_009438.1 PFAM: cytochrome c, class II; KEGG: shm:Shewmr7_1205 cytochrome c, class II; cytochrome c, class II 3169463 5079953 Sputcn32_2738 Shewanella putrefaciens CN-32 cytochrome c, class II YP_001184256.1 3169014 D 319224 CDS YP_001184257.1 146293833 5079954 complement(3169563..3170255) 1 NC_009438.1 PFAM: cytochrome B561; KEGG: she:Shewmr4_1133 cytochrome b561; cytochrome B561 3170255 5079954 Sputcn32_2739 Shewanella putrefaciens CN-32 cytochrome B561 YP_001184257.1 3169563 R 319224 CDS YP_001184258.1 146293834 5080799 3170553..3170912 1 NC_009438.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: shm:Shewmr7_1203 sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA 3170912 5080799 Sputcn32_2740 Shewanella putrefaciens CN-32 sigma 54 modulation protein/ribosomal protein S30EA YP_001184258.1 3170553 D 319224 CDS YP_001184259.1 146293835 5080800 3172126..3172656 1 NC_009438.1 PFAM: DNA polymerase III chi subunit, HolC; KEGG: she:Shewmr4_1131 DNA polymerase III chi subunit, HolC; DNA polymerase III chi subunit, HolC 3172656 5080800 Sputcn32_2741 Shewanella putrefaciens CN-32 DNA polymerase III chi subunit, HolC YP_001184259.1 3172126 D 319224 CDS YP_001184260.1 146293836 5080801 3172672..3175548 1 NC_009438.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 3175548 valS 5080801 valS Shewanella putrefaciens CN-32 valyl-tRNA synthetase YP_001184260.1 3172672 D 319224 CDS YP_001184261.1 146293837 5080810 complement(3177088..3177285) 1 NC_009438.1 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 3177285 5080810 Sputcn32_2743 Shewanella putrefaciens CN-32 carbon storage regulator YP_001184261.1 3177088 R 319224 CDS YP_001184262.1 146293838 5080811 complement(3177404..3178660) 1 NC_009438.1 KEGG: shm:Shewmr7_1199 aspartate kinase; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 3178660 5080811 Sputcn32_2744 Shewanella putrefaciens CN-32 aspartate kinase YP_001184262.1 3177404 R 319224 CDS YP_001184263.1 146293839 5080812 complement(3178670..3181348) 1 NC_009438.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 3181348 alaS 5080812 alaS Shewanella putrefaciens CN-32 alanyl-tRNA synthetase YP_001184263.1 3178670 R 319224 CDS YP_001184264.1 146293840 5080813 complement(3181635..3182048) 1 NC_009438.1 PFAM: regulatory protein RecX; KEGG: shm:Shewmr7_1197 regulatory protein RecX; regulatory protein RecX 3182048 5080813 Sputcn32_2746 Shewanella putrefaciens CN-32 regulatory protein RecX YP_001184264.1 3181635 R 319224 CDS YP_001184265.1 146293841 5080814 complement(3182123..3183196) 1 NC_009438.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 3183196 recA 5080814 recA Shewanella putrefaciens CN-32 recombinase A YP_001184265.1 3182123 R 319224 CDS YP_001184266.1 146293842 5080815 3183580..3186150 1 NC_009438.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 3186150 5080815 Sputcn32_2748 Shewanella putrefaciens CN-32 DNA mismatch repair protein MutS YP_001184266.1 3183580 D 319224 CDS YP_001184267.1 146293843 5080816 complement(3186247..3187227) 1 NC_009438.1 TIGRFAM: RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: son:SO3432 RNA polymerase sigma-38 factor; RpoD family RNA polymerase sigma factor 3187227 5080816 Sputcn32_2749 Shewanella putrefaciens CN-32 RpoD family RNA polymerase sigma factor YP_001184267.1 3186247 R 319224 CDS YP_001184268.1 146293844 5080817 complement(3187309..3188193) 1 NC_009438.1 PFAM: Peptidoglycan-binding LysM; peptidase M23B; KEGG: shm:Shewmr7_1193 peptidase M23B; peptidase M23B 3188193 5080817 Sputcn32_2750 Shewanella putrefaciens CN-32 peptidase M23B YP_001184268.1 3187309 R 319224 CDS YP_001184269.1 146293845 5080818 complement(3188286..3188921) 1 NC_009438.1 KEGG: son:SO3434 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 3188921 5080818 Sputcn32_2751 Shewanella putrefaciens CN-32 protein-L-isoaspartate O-methyltransferase YP_001184269.1 3188286 R 319224 CDS YP_001184270.1 146293846 5080819 complement(3188918..3189667) 1 NC_009438.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 3189667 surE 5080819 surE Shewanella putrefaciens CN-32 stationary phase survival protein SurE YP_001184270.1 3188918 R 319224 CDS YP_001184271.1 146293847 5080820 complement(3189664..3190746) 1 NC_009438.1 PFAM: tRNA pseudouridine synthase D, TruD; KEGG: shm:Shewmr7_1190 pseudouridylate synthase; pseudouridylate synthase 3190746 5080820 Sputcn32_2753 Shewanella putrefaciens CN-32 pseudouridylate synthase YP_001184271.1 3189664 R 319224 CDS YP_001184272.1 146293848 5080821 complement(3190768..3191253) 1 NC_009438.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 3191253 ispF 5080821 ispF Shewanella putrefaciens CN-32 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_001184272.1 3190768 R 319224 CDS YP_001184273.1 146293849 5080822 complement(3191294..3192055) 1 NC_009438.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3192055 ispD 5080822 ispD Shewanella putrefaciens CN-32 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001184273.1 3191294 R 319224 CDS YP_001184274.1 146293850 5080823 complement(3192064..3192420) 1 NC_009438.1 PFAM: Septum formation initiator; KEGG: shm:Shewmr7_1187 septum formation initiator; septum formation initiator 3192420 5080823 Sputcn32_2756 Shewanella putrefaciens CN-32 septum formation initiator YP_001184274.1 3192064 R 319224 CDS YP_001184275.1 146293851 5080824 complement(3192463..3193758) 1 NC_009438.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 3193758 eno 5080824 eno Shewanella putrefaciens CN-32 phosphopyruvate hydratase YP_001184275.1 3192463 R 319224 CDS YP_001184276.1 146293852 5080825 complement(3193964..3195601) 1 NC_009438.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 3195601 pyrG 5080825 pyrG Shewanella putrefaciens CN-32 CTP synthetase YP_001184276.1 3193964 R 319224 CDS YP_001184277.1 146293853 5080826 complement(3195718..3196644) 1 NC_009438.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 3196644 mazG 5080826 mazG Shewanella putrefaciens CN-32 nucleoside triphosphate pyrophosphohydrolase YP_001184277.1 3195718 R 319224 CDS YP_001184278.1 146293854 5080827 3197181..3198293 1 NC_009438.1 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 3198293 5080827 Sputcn32_2760 Shewanella putrefaciens CN-32 agmatine deiminase YP_001184278.1 3197181 D 319224 CDS YP_001184279.1 146293855 5080828 3198319..3200073 1 NC_009438.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3200073 5080828 Sputcn32_2761 Shewanella putrefaciens CN-32 amidase YP_001184279.1 3198319 D 319224 CDS YP_001184280.1 146293856 5080829 complement(3200255..3201319) 1 NC_009438.1 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3201319 5080829 Sputcn32_2762 Shewanella putrefaciens CN-32 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_001184280.1 3200255 R 319224 CDS YP_001184281.1 146293857 5080830 complement(3201375..3202349) 1 NC_009438.1 KEGG: cps:CPS_1152 hypothetical protein; hypothetical protein 3202349 5080830 Sputcn32_2763 Shewanella putrefaciens CN-32 hypothetical protein YP_001184281.1 3201375 R 319224 CDS YP_001184282.1 146293858 5080831 3203011..3207780 1 NC_009438.1 KEGG: eba:ebA5435 conserved hypothetical protein, probable DNA/RNA helicase; putative DNA/RNA helicase 3207780 5080831 Sputcn32_2764 Shewanella putrefaciens CN-32 putative DNA/RNA helicase YP_001184282.1 3203011 D 319224 CDS YP_001184283.1 146293859 5080832 complement(3208065..3210272) 1 NC_009438.1 KEGG: son:SO3455 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; RelA/SpoT domain protein; (p)ppGpp synthetase I SpoT/RelA 3210272 5080832 Sputcn32_2765 Shewanella putrefaciens CN-32 (p)ppGpp synthetase I SpoT/RelA YP_001184283.1 3208065 R 319224 CDS YP_001184284.1 146293860 5080833 complement(3210425..3211777) 1 NC_009438.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 3211777 rumA 5080833 rumA Shewanella putrefaciens CN-32 23S rRNA 5-methyluridine methyltransferase YP_001184284.1 3210425 R 319224 CDS YP_001184285.1 146293861 5080834 3211878..3214679 1 NC_009438.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 3214679 5080834 Sputcn32_2767 Shewanella putrefaciens CN-32 hybrid sensory histidine kinase BarA YP_001184285.1 3211878 D 319224 CDS YP_001184286.1 146293862 5080835 3214654..3215253 1 NC_009438.1 PFAM: protein of unknown function DUF416; KEGG: she:Shewmr4_1108 protein of unknown function DUF416; hypothetical protein 3215253 5080835 Sputcn32_2768 Shewanella putrefaciens CN-32 hypothetical protein YP_001184286.1 3214654 D 319224 CDS YP_001184287.1 146293863 5080836 complement(3215515..3216414) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3460 transcriptional regulator, LysR family; LysR family transcriptional regulator 3216414 5080836 Sputcn32_2769 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184287.1 3215515 R 319224 CDS YP_001184288.1 146293864 5080837 3216789..3217751 1 NC_009438.1 PFAM: Auxin Efflux Carrier; KEGG: shm:Shewmr7_1171 auxin efflux carrier; auxin efflux carrier 3217751 5080837 Sputcn32_2770 Shewanella putrefaciens CN-32 auxin efflux carrier YP_001184288.1 3216789 D 319224 CDS YP_001184289.1 146293865 5080838 3217879..3219537 1 NC_009438.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: she:Shewmr4_1104 DNA repair protein RecN; recombination and repair protein 3219537 5080838 Sputcn32_2771 Shewanella putrefaciens CN-32 recombination and repair protein YP_001184289.1 3217879 D 319224 CDS YP_001184290.1 146293866 5080839 complement(3219691..3220191) 1 NC_009438.1 PFAM: phosphatidylglycerophosphatase A; KEGG: shm:Shewmr7_1168 phosphatidylglycerophosphatase; phosphatidylglycerophosphatase 3220191 5080839 Sputcn32_2772 Shewanella putrefaciens CN-32 phosphatidylglycerophosphatase YP_001184290.1 3219691 R 319224 CDS YP_001184291.1 146293867 5080840 complement(3220201..3221172) 1 NC_009438.1 KEGG: she:Shewmr4_1101 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein; thiamine-monophosphate kinase 3221172 5080840 Sputcn32_2773 Shewanella putrefaciens CN-32 thiamine-monophosphate kinase YP_001184291.1 3220201 R 319224 CDS YP_001184292.1 146293868 5080841 complement(3221236..3221640) 1 NC_009438.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 3221640 nusB 5080841 nusB Shewanella putrefaciens CN-32 transcription antitermination protein NusB YP_001184292.1 3221236 R 319224 CDS YP_001184293.1 146293869 5080748 complement(3221655..3222131) 1 NC_009438.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 3222131 ribH 5080748 ribH Shewanella putrefaciens CN-32 6,7-dimethyl-8-ribityllumazine synthase YP_001184293.1 3221655 R 319224 CDS YP_001184294.1 146293870 5080749 complement(3222263..3223366) 1 NC_009438.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: shm:Shewmr7_1164 3,4-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3223366 5080749 Sputcn32_2776 Shewanella putrefaciens CN-32 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001184294.1 3222263 R 319224 CDS YP_001184295.1 146293871 5080750 complement(3223432..3224088) 1 NC_009438.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 3224088 5080750 Sputcn32_2777 Shewanella putrefaciens CN-32 riboflavin synthase subunit alpha YP_001184295.1 3223432 R 319224 CDS YP_001184296.1 146293872 5080751 complement(3224100..3225254) 1 NC_009438.1 KEGG: son:SO3469 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase, zinc-binding; bifunctional deaminase-reductase domain protein; riboflavin biosynthesis protein RibD 3225254 5080751 Sputcn32_2778 Shewanella putrefaciens CN-32 riboflavin biosynthesis protein RibD YP_001184296.1 3224100 R 319224 CDS YP_001184297.1 146293873 5080752 complement(3225362..3225811) 1 NC_009438.1 PFAM: ATP-cone domain protein; KEGG: shm:Shewmr7_1161 ribonucleotide reductase regulator NrdR-like protein; transcriptional regulator NrdR 3225811 nrdR 5080752 nrdR Shewanella putrefaciens CN-32 transcriptional regulator NrdR YP_001184297.1 3225362 R 319224 CDS YP_001184298.1 146293874 5080753 complement(3226011..3227264) 1 NC_009438.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3227264 glyA 5080753 glyA Shewanella putrefaciens CN-32 serine hydroxymethyltransferase YP_001184298.1 3226011 R 319224 CDS YP_001184299.1 146293875 5080754 3227454..3229121 1 NC_009438.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 3229121 5080754 Sputcn32_2781 Shewanella putrefaciens CN-32 putative ABC transporter ATP-binding protein YP_001184299.1 3227454 D 319224 CDS YP_001184300.1 146293876 5080755 complement(3229273..3230235) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_1157 transcriptional regulator, LysR family; LysR family transcriptional regulator 3230235 5080755 Sputcn32_2782 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184300.1 3229273 R 319224 CDS YP_001184301.1 146293877 5080756 3230471..3231394 1 NC_009438.1 PFAM: beta-lactamase domain protein; KEGG: son:SO3474 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3231394 5080756 Sputcn32_2783 Shewanella putrefaciens CN-32 beta-lactamase domain-containing protein YP_001184301.1 3230471 D 319224 CDS YP_001184302.1 146293878 5080757 3231548..3232249 1 NC_009438.1 KEGG: shm:Shewmr7_1155 putative protein-disulfide isomerase; putative protein-disulfide isomerase 3232249 5080757 Sputcn32_2784 Shewanella putrefaciens CN-32 putative protein-disulfide isomerase YP_001184302.1 3231548 D 319224 CDS YP_001184303.1 146293879 5080758 3232242..3232739 1 NC_009438.1 KEGG: pfl:PFL_0312 hypothetical protein; ketosteroid isomerase-like protein 3232739 5080758 Sputcn32_2785 Shewanella putrefaciens CN-32 ketosteroid isomerase-like protein YP_001184303.1 3232242 D 319224 CDS YP_001184304.1 146293880 5080759 3233043..3234161 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_1150 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3234161 5080759 Sputcn32_2786 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184304.1 3233043 D 319224 CDS YP_001184305.1 146293881 5080760 3234161..3237301 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_1149 acriflavin resistance protein; acriflavin resistance protein 3237301 5080760 Sputcn32_2787 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001184305.1 3234161 D 319224 CDS YP_001184306.1 146293882 5080761 complement(3237389..3238558) 1 NC_009438.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_1082 drug resistance transporter, Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 3238558 5080761 Sputcn32_2788 Shewanella putrefaciens CN-32 Bcr/CflA subfamily drug resistance transporter YP_001184306.1 3237389 R 319224 CDS YP_001184307.1 146293883 5080762 3238701..3239477 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; AraC protein, arabinose-binding/dimerisation; KEGG: son:SO3488 transcriptional regulator, AraC/XylS family; AraC family transcriptional regulator 3239477 5080762 Sputcn32_2789 Shewanella putrefaciens CN-32 AraC family transcriptional regulator YP_001184307.1 3238701 D 319224 CDS YP_001184308.1 146293884 5080763 3239624..3240097 1 NC_009438.1 PFAM: protein of unknown function DUF88; KEGG: sdn:Sden_0372 protein of unknown function DUF88; hypothetical protein 3240097 5080763 Sputcn32_2790 Shewanella putrefaciens CN-32 hypothetical protein YP_001184308.1 3239624 D 319224 CDS YP_001184309.1 146293885 5080764 complement(3240203..3243379) 1 NC_009438.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: she:Shewmr4_1074 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family protein 3243379 5080764 Sputcn32_2791 Shewanella putrefaciens CN-32 hydrophobe/amphiphile efflux-1 (HAE1) family protein YP_001184309.1 3240203 R 319224 CDS YP_001184310.1 146293886 5080765 complement(3243393..3244631) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: she:Shewmr4_1073 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3244631 5080765 Sputcn32_2792 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184310.1 3243393 R 319224 CDS YP_001184311.1 146293887 5080766 3245048..3245692 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_1144 transcriptional regulator, TetR family; TetR family transcriptional regulator 3245692 5080766 Sputcn32_2793 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001184311.1 3245048 D 319224 CDS YP_001184312.1 146293888 5080767 complement(3245765..3246193) 1 NC_009438.1 PFAM: OsmC family protein; KEGG: shm:Shewmr7_1143 OsmC family protein; OsmC family protein 3246193 5080767 Sputcn32_2794 Shewanella putrefaciens CN-32 OsmC family protein YP_001184312.1 3245765 R 319224 CDS YP_001184313.1 146293889 5080768 3246425..3247240 1 NC_009438.1 KEGG: she:Shewmr4_1070 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3247240 5080768 Sputcn32_2795 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001184313.1 3246425 D 319224 CDS YP_001184314.1 146293890 5080769 complement(3247221..3248111) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_1141 transcriptional regulator, LysR family; LysR family transcriptional regulator 3248111 5080769 Sputcn32_2796 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184314.1 3247221 R 319224 CDS YP_001184315.1 146293891 5080770 3248252..3249508 1 NC_009438.1 PFAM: adenylosuccinate synthetase; KEGG: shm:Shewmr7_1140 adenylosuccinate synthase; adenylosuccinate synthase 3249508 5080770 Sputcn32_2797 Shewanella putrefaciens CN-32 adenylosuccinate synthase YP_001184315.1 3248252 D 319224 CDS YP_001184316.1 146293892 5080771 complement(3249659..3250639) 1 NC_009438.1 PFAM: response regulator receiver; CheW domain protein; KEGG: vpa:VPA0746 chemotaxis protein CheV; putative CheW protein 3250639 5080771 Sputcn32_2798 Shewanella putrefaciens CN-32 putative CheW protein YP_001184316.1 3249659 R 319224 CDS YP_001184317.1 146293893 5080772 3250882..3251307 1 NC_009438.1 PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_1139 thioesterase superfamily protein; thioesterase superfamily protein 3251307 5080772 Sputcn32_2799 Shewanella putrefaciens CN-32 thioesterase superfamily protein YP_001184317.1 3250882 D 319224 CDS YP_001184318.1 146293894 5080773 complement(3251391..3252887) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: she:Shewmr4_1066 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 3252887 5080773 Sputcn32_2800 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001184318.1 3251391 R 319224 CDS YP_001184319.1 146293895 5080774 complement(3252922..3253764) 1 NC_009438.1 PFAM: HDOD; KEGG: shm:Shewmr7_1137 putative signal transduction protein; putative signal transduction protein 3253764 5080774 Sputcn32_2801 Shewanella putrefaciens CN-32 putative signal transduction protein YP_001184319.1 3252922 R 319224 CDS YP_001184320.1 146293896 5080775 3254067..3255434 1 NC_009438.1 PFAM: peptidase U32; KEGG: son:SO1252 peptidase, U32 family; peptidase U32 3255434 5080775 Sputcn32_2802 Shewanella putrefaciens CN-32 peptidase U32 YP_001184320.1 3254067 D 319224 CDS YP_001184321.1 146293897 5080776 3255438..3255689 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: shm:Shewmr7_1135 4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3255689 5080776 Sputcn32_2803 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001184321.1 3255438 D 319224 CDS YP_001184322.1 146293898 5080777 complement(3255785..3256321) 1 NC_009438.1 KEGG: shm:Shewmr7_1134 sterol-binding domain protein; sterol-binding domain-containing protein 3256321 5080777 Sputcn32_2804 Shewanella putrefaciens CN-32 sterol-binding domain-containing protein YP_001184322.1 3255785 R 319224 CDS YP_001184323.1 146293899 5080778 3256460..3257461 1 NC_009438.1 PFAM: peptidase U32; KEGG: she:Shewmr4_1061 peptidase U32; peptidase U32 3257461 5080778 Sputcn32_2805 Shewanella putrefaciens CN-32 peptidase U32 YP_001184323.1 3256460 D 319224 CDS YP_001184324.1 146293900 5080779 3257503..3258378 1 NC_009438.1 PFAM: peptidase U32; KEGG: son:SO1248 hypothetical peptidase; peptidase U32 3258378 5080779 Sputcn32_2806 Shewanella putrefaciens CN-32 peptidase U32 YP_001184324.1 3257503 D 319224 CDS YP_001184325.1 146293901 5080780 complement(3258403..3259083) 1 NC_009438.1 KEGG: she:Shewmr4_1059 hypothetical protein; hypothetical protein 3259083 5080780 Sputcn32_2807 Shewanella putrefaciens CN-32 hypothetical protein YP_001184325.1 3258403 R 319224 CDS YP_001184326.1 146293902 5080781 3259827..3261158 1 NC_009438.1 PFAM: nucleoside recognition domain protein; KEGG: shm:Shewmr7_1129 nucleoside recognition domain protein; nucleoside recognition domain-containing protein 3261158 5080781 Sputcn32_2808 Shewanella putrefaciens CN-32 nucleoside recognition domain-containing protein YP_001184326.1 3259827 D 319224 CDS YP_001184327.1 146293903 5080782 3261786..3262853 1 NC_009438.1 PFAM: metallophosphoesterase; KEGG: shm:Shewmr7_1122 metallophosphoesterase; metallophosphoesterase 3262853 5080782 Sputcn32_2809 Shewanella putrefaciens CN-32 metallophosphoesterase YP_001184327.1 3261786 D 319224 CDS YP_001184328.1 146293904 5080783 3262843..3264735 1 NC_009438.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: shm:Shewmr7_1121 phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 3264735 5080783 Sputcn32_2810 Shewanella putrefaciens CN-32 phospholipid/glycerol acyltransferase YP_001184328.1 3262843 D 319224 CDS YP_001184329.1 146293905 5080784 3264860..3265291 1 NC_009438.1 PFAM: CBS domain containing protein; KEGG: shm:Shewmr7_1120 CBS domain containing protein; hypothetical protein 3265291 5080784 Sputcn32_2811 Shewanella putrefaciens CN-32 hypothetical protein YP_001184329.1 3264860 D 319224 CDS YP_001184330.1 146293906 5080785 complement(3265376..3266728) 1 NC_009438.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: son:SO1236 xanthine/uracil permease family protein; xanthine/uracil/vitamin C permease 3266728 5080785 Sputcn32_2812 Shewanella putrefaciens CN-32 xanthine/uracil/vitamin C permease YP_001184330.1 3265376 R 319224 CDS YP_001184331.1 146293907 5080786 3267318..3267689 1 NC_009438.1 PFAM: type IV pilus assembly PilZ; KEGG: shm:Shewmr7_1111 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3267689 5080786 Sputcn32_2813 Shewanella putrefaciens CN-32 type IV pilus assembly PilZ YP_001184331.1 3267318 D 319224 CDS YP_001184332.1 146293908 5080787 complement(3267749..3269113) 1 NC_009438.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 3269113 5080787 Sputcn32_2814 Shewanella putrefaciens CN-32 DNA repair protein RadA YP_001184332.1 3267749 R 319224 CDS YP_001184333.1 146293909 5080788 3269270..3271657 1 NC_009438.1 PFAM: type IV pilus assembly PilZ; KEGG: she:Shewmr4_1044 type IV pilus assembly PilZ; type IV pilus assembly PilZ 3271657 5080788 Sputcn32_2815 Shewanella putrefaciens CN-32 type IV pilus assembly PilZ YP_001184333.1 3269270 D 319224 CDS YP_001184334.1 146293910 5080789 complement(3271670..3272647) 1 NC_009438.1 KEGG: shm:Shewmr7_1108 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 3272647 5080789 Sputcn32_2816 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001184334.1 3271670 R 319224 CDS YP_001184335.1 146293911 5080790 complement(3272763..3273758) 1 NC_009438.1 KEGG: she:Shewmr4_1042 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoserine phosphatase SerB 3273758 5080790 Sputcn32_2817 Shewanella putrefaciens CN-32 phosphoserine phosphatase SerB YP_001184335.1 3272763 R 319224 CDS YP_001184336.1 146293912 5080791 3273823..3274854 1 NC_009438.1 KEGG: son:SO1222 membrane protein; membrane protein 3274854 5080791 Sputcn32_2818 Shewanella putrefaciens CN-32 membrane protein YP_001184336.1 3273823 D 319224 CDS YP_001184337.1 146293913 5080792 complement(3275041..3275751) 1 NC_009438.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 3275751 deoD 5080792 deoD Shewanella putrefaciens CN-32 purine nucleoside phosphorylase YP_001184337.1 3275041 R 319224 CDS YP_001184338.1 146293914 5080793 complement(3275843..3277057) 1 NC_009438.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 3277057 5080793 Sputcn32_2820 Shewanella putrefaciens CN-32 phosphopentomutase YP_001184338.1 3275843 R 319224 CDS YP_001184339.1 146293915 5080794 complement(3277067..3278398) 1 NC_009438.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 3278398 deoA 5080794 deoA Shewanella putrefaciens CN-32 thymidine phosphorylase YP_001184339.1 3277067 R 319224 CDS YP_001184340.1 146293916 5080795 complement(3278583..3279353) 1 NC_009438.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3279353 5080795 Sputcn32_2822 Shewanella putrefaciens CN-32 deoxyribose-phosphate aldolase YP_001184340.1 3278583 R 319224 CDS YP_001184341.1 146293917 5080796 complement(3279760..3280599) 1 NC_009438.1 PFAM: nucleoside-specific channel-forming protein, Tsx; KEGG: shm:Shewmr7_1101 nucleoside-specific channel-forming protein, Tsx; nucleoside-specific channel-forming protein, Tsx 3280599 5080796 Sputcn32_2823 Shewanella putrefaciens CN-32 nucleoside-specific channel-forming protein, Tsx YP_001184341.1 3279760 R 319224 CDS YP_001184342.1 146293918 5080797 complement(3280959..3282218) 1 NC_009438.1 TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: shm:Shewmr7_1100 nucleoside transporter; nucleoside transporter 3282218 5080797 Sputcn32_2824 Shewanella putrefaciens CN-32 nucleoside transporter YP_001184342.1 3280959 R 319224 CDS YP_001184343.1 146293919 5080798 complement(3282395..3283159) 1 NC_009438.1 PFAM: TatD-related deoxyribonuclease; KEGG: she:Shewmr4_1034 TatD-related deoxyribonuclease; TatD-related deoxyribonuclease 3283159 5080798 Sputcn32_2825 Shewanella putrefaciens CN-32 TatD-related deoxyribonuclease YP_001184343.1 3282395 R 319224 CDS YP_001184344.1 146293920 5078658 complement(3283170..3283355) 1 NC_009438.1 KEGG: sfr:Sfri_0998 hypothetical protein; hypothetical protein 3283355 5078658 Sputcn32_2826 Shewanella putrefaciens CN-32 hypothetical protein YP_001184344.1 3283170 R 319224 CDS YP_001184345.1 146293921 5078659 complement(3283438..3285018) 1 NC_009438.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 3285018 prfC 5078659 prfC Shewanella putrefaciens CN-32 peptide chain release factor 3 YP_001184345.1 3283438 R 319224 CDS YP_001184346.1 146293922 5078660 complement(3285117..3286022) 1 NC_009438.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 3286022 5078660 Sputcn32_2828 Shewanella putrefaciens CN-32 lipoprotein NlpI YP_001184346.1 3285117 R 319224 CDS YP_001184347.1 146293923 5078661 complement(3286214..3288313) 1 NC_009438.1 KEGG: son:SO1209 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH, type 1, domain protein; SMART: KH domain protein; polynucleotide phosphorylase/polyadenylase 3288313 5078661 Sputcn32_2829 Shewanella putrefaciens CN-32 polynucleotide phosphorylase/polyadenylase YP_001184347.1 3286214 R 319224 CDS YP_001184348.1 146293924 5078662 3288509..3290557 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: shm:Shewmr7_1095 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 3290557 5078662 Sputcn32_2830 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001184348.1 3288509 D 319224 CDS YP_001184349.1 146293925 5078663 complement(3290634..3290903) 1 NC_009438.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 3290903 rpsO 5078663 rpsO Shewanella putrefaciens CN-32 30S ribosomal protein S15 YP_001184349.1 3290634 R 319224 CDS YP_001184350.1 146293926 5078664 complement(3291032..3291988) 1 NC_009438.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 3291988 truB 5078664 truB Shewanella putrefaciens CN-32 tRNA pseudouridine synthase B YP_001184350.1 3291032 R 319224 CDS YP_001184351.1 146293927 5078665 complement(3291988..3292437) 1 NC_009438.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 3292437 rbfA 5078665 rbfA Shewanella putrefaciens CN-32 ribosome-binding factor A YP_001184351.1 3291988 R 319224 CDS YP_001184352.1 146293928 5078666 complement(3292501..3295143) 1 NC_009438.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 3295143 infB 5078666 infB Shewanella putrefaciens CN-32 translation initiation factor IF-2 YP_001184352.1 3292501 R 319224 CDS YP_001184353.1 146293929 5078667 complement(3295169..3296668) 1 NC_009438.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 3296668 nusA 5078667 nusA Shewanella putrefaciens CN-32 transcription elongation factor NusA YP_001184353.1 3295169 R 319224 CDS YP_001184354.1 146293930 5078668 complement(3296698..3297153) 1 NC_009438.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 3297153 5078668 Sputcn32_2836 Shewanella putrefaciens CN-32 hypothetical protein YP_001184354.1 3296698 R 319224 CDS YP_001184355.1 146293931 5078671 complement(3297585..3297920) 1 NC_009438.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: son:SO1201 preprotein translocase, SecG subunit; preprotein translocase subunit SecG 3297920 secG 5078671 secG Shewanella putrefaciens CN-32 preprotein translocase subunit SecG YP_001184355.1 3297585 R 319224 CDS YP_001184356.1 146293932 5078672 complement(3297922..3298704) 1 NC_009438.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 3298704 5078672 Sputcn32_2838 Shewanella putrefaciens CN-32 triosephosphate isomerase YP_001184356.1 3297922 R 319224 CDS YP_001184357.1 146293933 5078673 complement(3298899..3300236) 1 NC_009438.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3300236 glmM 5078673 glmM Shewanella putrefaciens CN-32 phosphoglucosamine mutase YP_001184357.1 3298899 R 319224 CDS YP_001184358.1 146293934 5078674 complement(3300317..3301150) 1 NC_009438.1 KEGG: shm:Shewmr7_1085 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase, DHPS; dihydropteroate synthase 3301150 5078674 Sputcn32_2840 Shewanella putrefaciens CN-32 dihydropteroate synthase YP_001184358.1 3300317 R 319224 CDS YP_001184359.1 146293935 5078675 complement(3301362..3303335) 1 NC_009438.1 KEGG: she:Shewmr4_1019 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase, central domain protein; peptidase M41, FtsH extracellular; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 3303335 5078675 Sputcn32_2841 Shewanella putrefaciens CN-32 ATP-dependent metalloprotease FtsH YP_001184359.1 3301362 R 319224 CDS YP_001184360.1 146293936 5078676 complement(3303365..3303994) 1 NC_009438.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase J 3303994 rrmJ 5078676 rrmJ Shewanella putrefaciens CN-32 23S rRNA methyltransferase J YP_001184360.1 3303365 R 319224 CDS YP_001184361.1 146293937 5078677 3304085..3304384 1 NC_009438.1 PFAM: protein of unknown function UPF0044; KEGG: shm:Shewmr7_1082 protein of unknown function UPF0044; hypothetical protein 3304384 5078677 Sputcn32_2843 Shewanella putrefaciens CN-32 hypothetical protein YP_001184361.1 3304085 D 319224 CDS YP_001184362.1 146293938 5078678 complement(3304463..3305359) 1 NC_009438.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 3305359 secF 5078678 secF Shewanella putrefaciens CN-32 preprotein translocase subunit SecF YP_001184362.1 3304463 R 319224 CDS YP_001184363.1 146293939 5078679 complement(3305362..3307176) 1 NC_009438.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 3307176 secD 5078679 secD Shewanella putrefaciens CN-32 preprotein translocase subunit SecD YP_001184363.1 3305362 R 319224 CDS YP_001184364.1 146293940 5078680 complement(3307402..3307947) 1 NC_009438.1 KEGG: son:SO1192 hypothetical protein; hypothetical protein 3307947 5078680 Sputcn32_2846 Shewanella putrefaciens CN-32 hypothetical protein YP_001184364.1 3307402 R 319224 CDS YP_001184365.1 146293941 5078681 complement(3308301..3308777) 1 NC_009438.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: son:SO1191 transcription elongation factor GreA; transcription elongation factor GreA 3308777 5078681 Sputcn32_2847 Shewanella putrefaciens CN-32 transcription elongation factor GreA YP_001184365.1 3308301 R 319224 CDS YP_001184366.1 146293942 5078682 complement(3309077..3309895) 1 NC_009438.1 KEGG: shm:Shewmr7_1077 hypothetical protein; hypothetical protein 3309895 5078682 Sputcn32_2848 Shewanella putrefaciens CN-32 hypothetical protein YP_001184366.1 3309077 R 319224 CDS YP_001184367.1 146293943 5078683 complement(3309933..3310445) 1 NC_009438.1 KEGG: shm:Shewmr7_1076 lysozyme; hypothetical protein 3310445 5078683 Sputcn32_2849 Shewanella putrefaciens CN-32 hypothetical protein YP_001184367.1 3309933 R 319224 CDS YP_001184368.1 146293944 5078684 complement(3310461..3311099) 1 NC_009438.1 PFAM: PepSY-associated TM helix domain protein; KEGG: son:SO1188 hypothetical protein; PepSY-associated TM helix domain-containing protein 3311099 5078684 Sputcn32_2850 Shewanella putrefaciens CN-32 PepSY-associated TM helix domain-containing protein YP_001184368.1 3310461 R 319224 CDS YP_001184369.1 146293945 5078685 3311511..3312161 1 NC_009438.1 KEGG: son:SO1187 hypothetical protein; hypothetical protein 3312161 5078685 Sputcn32_2851 Shewanella putrefaciens CN-32 hypothetical protein YP_001184369.1 3311511 D 319224 CDS YP_001184370.1 146293946 5078693 complement(3313398..3314489) 1 NC_009438.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3314489 5078693 Sputcn32_2852 Shewanella putrefaciens CN-32 GTP-dependent nucleic acid-binding protein EngD YP_001184370.1 3313398 R 319224 CDS YP_001184371.1 146293947 5078694 complement(3314624..3315211) 1 NC_009438.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 3315211 5078694 Sputcn32_2853 Shewanella putrefaciens CN-32 peptidyl-tRNA hydrolase YP_001184371.1 3314624 R 319224 CDS YP_001184372.1 146293948 5078695 complement(3315356..3316597) 1 NC_009438.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: shm:Shewmr7_1071 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3316597 5078695 Sputcn32_2854 Shewanella putrefaciens CN-32 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001184372.1 3315356 R 319224 CDS YP_001184373.1 146293949 5078696 3316958..3318382 1 NC_009438.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 3318382 5078696 Sputcn32_2855 Shewanella putrefaciens CN-32 (dimethylallyl)adenosine tRNA methylthiotransferase YP_001184373.1 3316958 D 319224 CDS YP_001184374.1 146293950 5078697 3318629..3319678 1 NC_009438.1 PFAM: PhoH family protein; KEGG: she:Shewmr4_1003 PhoH family protein; PhoH family protein 3319678 5078697 Sputcn32_2856 Shewanella putrefaciens CN-32 PhoH family protein YP_001184374.1 3318629 D 319224 CDS YP_001184375.1 146293951 5078698 3319668..3320129 1 NC_009438.1 PFAM: protein of unknown function UPF0054; KEGG: she:Shewmr4_1002 protein of unknown function UPF0054; putative metalloprotease 3320129 5078698 Sputcn32_2857 Shewanella putrefaciens CN-32 putative metalloprotease YP_001184375.1 3319668 D 319224 CDS YP_001184376.1 146293952 5078699 3320169..3321044 1 NC_009438.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: shm:Shewmr7_1066 CBS domain containing protein; hypothetical protein 3321044 5078699 Sputcn32_2858 Shewanella putrefaciens CN-32 hypothetical protein YP_001184376.1 3320169 D 319224 CDS YP_001184377.1 146293953 5078700 3321087..3322643 1 NC_009438.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 3322643 lnt 5078700 lnt Shewanella putrefaciens CN-32 apolipoprotein N-acyltransferase YP_001184377.1 3321087 D 319224 CDS YP_001184378.1 146293954 5078607 3322654..3323157 1 NC_009438.1 KEGG: shm:Shewmr7_1064 methylation site containing protein; methylation site containing protein 3323157 5078607 Sputcn32_2860 Shewanella putrefaciens CN-32 methylation site containing protein YP_001184378.1 3322654 D 319224 CDS YP_001184379.1 146293955 5078608 3323272..3323931 1 NC_009438.1 KEGG: sde:Sde_2848 histidine kinase; histidine kinase 3323931 5078608 Sputcn32_2861 Shewanella putrefaciens CN-32 histidine kinase YP_001184379.1 3323272 D 319224 CDS YP_001184380.1 146293956 5078609 complement(3324036..3324536) 1 NC_009438.1 PFAM: protein of unknown function DUF1451; KEGG: shm:Shewmr7_1063 protein of unknown function DUF1451; hypothetical protein 3324536 5078609 Sputcn32_2862 Shewanella putrefaciens CN-32 hypothetical protein YP_001184380.1 3324036 R 319224 CDS YP_001184381.1 146293957 5078610 3324659..3327238 1 NC_009438.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 3327238 leuS 5078610 leuS Shewanella putrefaciens CN-32 leucyl-tRNA synthetase YP_001184381.1 3324659 D 319224 CDS YP_001184382.1 146293958 5078611 3327259..3327753 1 NC_009438.1 PFAM: Rare lipoprotein B; KEGG: shm:Shewmr7_1061 rare lipoprotein B; rare lipoprotein B 3327753 5078611 Sputcn32_2864 Shewanella putrefaciens CN-32 rare lipoprotein B YP_001184382.1 3327259 D 319224 CDS YP_001184383.1 146293959 5078612 3327806..3328837 1 NC_009438.1 KEGG: son:SO1172 DNA polymerase III delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; DNA polymerase III subunit delta 3328837 5078612 Sputcn32_2865 Shewanella putrefaciens CN-32 DNA polymerase III subunit delta YP_001184383.1 3327806 D 319224 CDS YP_001184384.1 146293960 5078613 3328847..3329494 1 NC_009438.1 KEGG: shm:Shewmr7_1059 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3329494 5078613 Sputcn32_2866 Shewanella putrefaciens CN-32 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001184384.1 3328847 D 319224 CDS YP_001184385.1 146293961 5078614 3329602..3329931 1 NC_009438.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: shm:Shewmr7_1058 iojap-like protein; iojap family protein 3329931 5078614 Sputcn32_2867 Shewanella putrefaciens CN-32 iojap family protein YP_001184385.1 3329602 D 319224 CDS YP_001184386.1 146293962 5078615 3329931..3330401 1 NC_009438.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 3330401 5078615 Sputcn32_2868 Shewanella putrefaciens CN-32 rRNA large subunit methyltransferase YP_001184386.1 3329931 D 319224 CDS YP_001184387.1 146293963 5078616 3330463..3332319 1 NC_009438.1 PFAM: penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; KEGG: shm:Shewmr7_1056 peptidoglycan glycosyltransferase; peptidoglycan glycosyltransferase 3332319 5078616 Sputcn32_2869 Shewanella putrefaciens CN-32 peptidoglycan glycosyltransferase YP_001184387.1 3330463 D 319224 CDS YP_001184388.1 146293964 5078617 3332316..3333422 1 NC_009438.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: shm:Shewmr7_1055 rod shape-determining protein RodA; rod shape-determining protein RodA 3333422 5078617 Sputcn32_2870 Shewanella putrefaciens CN-32 rod shape-determining protein RodA YP_001184388.1 3332316 D 319224 CDS YP_001184389.1 146293965 5078618 3333439..3334503 1 NC_009438.1 TIGRFAM: lytic murein transglycosylase B; KEGG: shm:Shewmr7_1054 lytic murein transglycosylase B; lytic murein transglycosylase B 3334503 5078618 Sputcn32_2871 Shewanella putrefaciens CN-32 lytic murein transglycosylase B YP_001184389.1 3333439 D 319224 CDS YP_001184390.1 146293966 5078619 3334487..3335332 1 NC_009438.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain protein; KEGG: she:Shewmr4_0988 rare lipoprotein A; rare lipoprotein A 3335332 5078619 Sputcn32_2872 Shewanella putrefaciens CN-32 rare lipoprotein A YP_001184390.1 3334487 D 319224 CDS YP_001184391.1 146293967 5078620 3335478..3336653 1 NC_009438.1 PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: son:SO1164 D-alanyl-D-alanine carboxypeptidase; serine-type D-Ala-D-Ala carboxypeptidase 3336653 5078620 Sputcn32_2873 Shewanella putrefaciens CN-32 serine-type D-Ala-D-Ala carboxypeptidase YP_001184391.1 3335478 D 319224 CDS YP_001184392.1 146293968 5078621 3336773..3337039 1 NC_009438.1 PFAM: protein of unknown function DUF493; KEGG: shm:Shewmr7_1051 protein of unknown function DUF493; hypothetical protein 3337039 5078621 Sputcn32_2874 Shewanella putrefaciens CN-32 hypothetical protein YP_001184392.1 3336773 D 319224 CDS YP_001184393.1 146293969 5078622 3337127..3337786 1 NC_009438.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 3337786 lipB 5078622 lipB Shewanella putrefaciens CN-32 lipoate-protein ligase B YP_001184393.1 3337127 D 319224 CDS YP_001184394.1 146293970 5078623 3337783..3338748 1 NC_009438.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 3338748 5078623 Sputcn32_2876 Shewanella putrefaciens CN-32 lipoyl synthase YP_001184394.1 3337783 D 319224 CDS YP_001184395.1 146293971 5078624 complement(3338818..3339315) 1 NC_009438.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1160 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 3339315 5078624 Sputcn32_2877 Shewanella putrefaciens CN-32 ribosomal-protein-alanine acetyltransferase YP_001184395.1 3338818 R 319224 CDS YP_001184396.1 146293972 5078625 complement(3339339..3339689) 1 NC_009438.1 KEGG: shm:Shewmr7_1047 hypothetical protein; hypothetical protein 3339689 5078625 Sputcn32_2878 Shewanella putrefaciens CN-32 hypothetical protein YP_001184396.1 3339339 R 319224 CDS YP_001184397.1 146293973 5078626 3339897..3340364 1 NC_009438.1 PFAM: Ferritin, Dps family protein; KEGG: shm:Shewmr7_1046 ferritin, Dps family protein; Ferritin, Dps family protein 3340364 5078626 Sputcn32_2879 Shewanella putrefaciens CN-32 Ferritin, Dps family protein YP_001184397.1 3339897 D 319224 CDS YP_001184398.1 146293974 5078627 complement(3340459..3341715) 1 NC_009438.1 PFAM: protein of unknown function DUF1624; KEGG: she:Shewmr4_0980 hypothetical protein; hypothetical protein 3341715 5078627 Sputcn32_2880 Shewanella putrefaciens CN-32 hypothetical protein YP_001184398.1 3340459 R 319224 CDS YP_001184399.1 146293975 5078628 complement(3341705..3343849) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_0979 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3343849 5078628 Sputcn32_2881 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001184399.1 3341705 R 319224 CDS YP_001184400.1 146293976 5078629 complement(3343935..3344225) 1 NC_009438.1 KEGG: shm:Shewmr7_1043 hypothetical protein; hypothetical protein 3344225 5078629 Sputcn32_2882 Shewanella putrefaciens CN-32 hypothetical protein YP_001184400.1 3343935 R 319224 CDS YP_001184401.1 146293977 5078630 3344428..3345048 1 NC_009438.1 KEGG: son:SOA0063 ISSod8, transposase; ISSod8, transposase 3345048 5078630 Sputcn32_2883 Shewanella putrefaciens CN-32 ISSod8, transposase YP_001184401.1 3344428 D 319224 CDS YP_001184402.1 146293978 5078631 complement(3345183..3345602) 1 NC_009438.1 KEGG: ddi:DDB0219841 hypothetical protein; hypothetical protein 3345602 5078631 Sputcn32_2884 Shewanella putrefaciens CN-32 hypothetical protein YP_001184402.1 3345183 R 319224 CDS YP_001184403.1 146293979 5078633 3346726..3347073 1 NC_009438.1 hypothetical protein 3347073 5078633 Sputcn32_2886 Shewanella putrefaciens CN-32 hypothetical protein YP_001184403.1 3346726 D 319224 CDS YP_001184404.1 146293980 5078635 complement(3347632..3348921) 1 NC_009438.1 PFAM: beta-lactamase domain protein; KEGG: dvu:DVU1700 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3348921 5078635 Sputcn32_2888 Shewanella putrefaciens CN-32 beta-lactamase domain-containing protein YP_001184404.1 3347632 R 319224 CDS YP_001184405.1 146293981 5078636 complement(3348921..3349853) 1 NC_009438.1 KEGG: sus:Acid_0787 conserved hypothetical protein; hypothetical protein 3349853 5078636 Sputcn32_2889 Shewanella putrefaciens CN-32 hypothetical protein YP_001184405.1 3348921 R 319224 CDS YP_001184406.1 146293982 5078637 complement(3349859..3350524) 1 NC_009438.1 PFAM: metallophosphoesterase; KEGG: ppr:PBPRA0880 hypothetical protein; metallophosphoesterase 3350524 5078637 Sputcn32_2890 Shewanella putrefaciens CN-32 metallophosphoesterase YP_001184406.1 3349859 R 319224 CDS YP_001184407.1 146293983 5078638 complement(3350566..3351168) 1 NC_009438.1 KEGG: dps:DP0404 hypothetical protein; hypothetical protein 3351168 5078638 Sputcn32_2891 Shewanella putrefaciens CN-32 hypothetical protein YP_001184407.1 3350566 R 319224 CDS YP_001184408.1 146293984 5078639 3351518..3352093 1 NC_009438.1 hypothetical protein 3352093 5078639 Sputcn32_2892 Shewanella putrefaciens CN-32 hypothetical protein YP_001184408.1 3351518 D 319224 CDS YP_001184409.1 146293985 5078640 3352083..3354299 1 NC_009438.1 hypothetical protein 3354299 5078640 Sputcn32_2893 Shewanella putrefaciens CN-32 hypothetical protein YP_001184409.1 3352083 D 319224 CDS YP_001184410.1 146293986 5078641 3354292..3357321 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: pcr:Pcryo_0912 phage integrase; phage integrase family protein 3357321 5078641 Sputcn32_2894 Shewanella putrefaciens CN-32 phage integrase family protein YP_001184410.1 3354292 D 319224 CDS YP_001184411.1 146293987 5078642 3357533..3358846 1 NC_009438.1 KEGG: vvy:VV0261 hypothetical protein; hypothetical protein 3358846 5078642 Sputcn32_2895 Shewanella putrefaciens CN-32 hypothetical protein YP_001184411.1 3357533 D 319224 CDS YP_001184412.1 146293988 5078643 complement(3359224..3359598) 1 NC_009438.1 KEGG: abo:ABO_1505 hypothetical protein; hypothetical protein 3359598 5078643 Sputcn32_2896 Shewanella putrefaciens CN-32 hypothetical protein YP_001184412.1 3359224 R 319224 CDS YP_001184413.1 146293989 5078644 complement(3360109..3361269) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: pcr:Pcryo_0961 phage integrase; phage integrase family protein 3361269 5078644 Sputcn32_2897 Shewanella putrefaciens CN-32 phage integrase family protein YP_001184413.1 3360109 R 319224 CDS YP_001184414.1 146293990 5078645 complement(3361278..3361484) 1 NC_009438.1 KEGG: pcr:Pcryo_0962 hypothetical protein; hypothetical protein 3361484 5078645 Sputcn32_2898 Shewanella putrefaciens CN-32 hypothetical protein YP_001184414.1 3361278 R 319224 CDS YP_001184415.1 146293991 5078646 3361613..3361819 1 NC_009438.1 SMART: helix-turn-helix domain protein; KEGG: pol:Bpro_0373 transcriptional regulator, Cro/CI family; helix-turn-helix domain-containing protein 3361819 5078646 Sputcn32_2899 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001184415.1 3361613 D 319224 CDS YP_001184416.1 146293992 5078647 3362021..3363319 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: sdn:Sden_0317 phage integrase; phage integrase family protein 3363319 5078647 Sputcn32_2900 Shewanella putrefaciens CN-32 phage integrase family protein YP_001184416.1 3362021 D 319224 CDS YP_001184417.1 146293993 5078648 3363329..3364162 1 NC_009438.1 hypothetical protein 3364162 5078648 Sputcn32_2901 Shewanella putrefaciens CN-32 hypothetical protein YP_001184417.1 3363329 D 319224 CDS YP_001184418.1 146293994 5078649 3364278..3364487 1 NC_009438.1 PFAM: Prophage CP4-57 regulatory; KEGG: cps:CPS_2017 hypothetical protein; phage transcriptional regulator AlpA 3364487 5078649 Sputcn32_2902 Shewanella putrefaciens CN-32 phage transcriptional regulator AlpA YP_001184418.1 3364278 D 319224 CDS YP_001184419.1 146293995 5078650 3364910..3365845 1 NC_009438.1 KEGG: son:SO4260 hypothetical protein; hypothetical protein 3365845 5078650 Sputcn32_2903 Shewanella putrefaciens CN-32 hypothetical protein YP_001184419.1 3364910 D 319224 CDS YP_001184420.1 146293996 5078651 3366023..3366676 1 NC_009438.1 KEGG: son:SO4261 hypothetical protein; hypothetical protein 3366676 5078651 Sputcn32_2904 Shewanella putrefaciens CN-32 hypothetical protein YP_001184420.1 3366023 D 319224 CDS YP_001184421.1 146293997 5078652 complement(3366839..3367222) 1 NC_009438.1 hypothetical protein 3367222 5078652 Sputcn32_2905 Shewanella putrefaciens CN-32 hypothetical protein YP_001184421.1 3366839 R 319224 CDS YP_001184422.1 146293998 5078653 3367382..3367798 1 NC_009438.1 KEGG: eca:ECA0367 putative DNA-binding protein; putative DNA-binding protein 3367798 5078653 Sputcn32_2906 Shewanella putrefaciens CN-32 putative DNA-binding protein YP_001184422.1 3367382 D 319224 CDS YP_001184423.1 146293999 5078654 3367890..3368189 1 NC_009438.1 PFAM: protein of unknown function UPF0150; KEGG: plu:plu2506 hypothetical protein; hypothetical protein 3368189 5078654 Sputcn32_2907 Shewanella putrefaciens CN-32 hypothetical protein YP_001184423.1 3367890 D 319224 CDS YP_001184424.1 146294000 5078655 3368533..3370104 1 NC_009438.1 PFAM: N-6 DNA methylase; KEGG: bxe:Bxe_A0224 type I restriction-modification system, M subunit; N-6 DNA methylase 3370104 5078655 Sputcn32_2908 Shewanella putrefaciens CN-32 N-6 DNA methylase YP_001184424.1 3368533 D 319224 CDS YP_001184425.1 146294001 5078656 3370094..3371416 1 NC_009438.1 PFAM: restriction modification system DNA specificity domain; KEGG: pol:Bpro_1941 restriction endonuclease S subunits-like; restriction modification system DNA specificity subunit 3371416 5078656 Sputcn32_2909 Shewanella putrefaciens CN-32 restriction modification system DNA specificity subunit YP_001184425.1 3370094 D 319224 CDS YP_001184426.1 146294002 5078657 3371431..3374133 1 NC_009438.1 PFAM: ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: psb:Psyr_3725 ATPas; ATPase 3374133 5078657 Sputcn32_2910 Shewanella putrefaciens CN-32 ATPase YP_001184426.1 3371431 D 319224 CDS YP_001184427.1 146294003 5078137 3374133..3375440 1 NC_009438.1 KEGG: psb:Psyr_3724 hypothetical protein; hypothetical protein 3375440 5078137 Sputcn32_2911 Shewanella putrefaciens CN-32 hypothetical protein YP_001184427.1 3374133 D 319224 CDS YP_001184428.1 146294004 5078138 3375839..3378976 1 NC_009438.1 KEGG: bxe:Bxe_A0222 type I site-specific deoxyribonuclease HsdR; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 3378976 5078138 Sputcn32_2912 Shewanella putrefaciens CN-32 HsdR family type I site-specific deoxyribonuclease YP_001184428.1 3375839 D 319224 CDS YP_001184429.1 146294005 5078139 complement(3379039..3379461) 1 NC_009438.1 PFAM: helix-turn-helix domain protein; XRE family transcriptional regulator 3379461 5078139 Sputcn32_2913 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001184429.1 3379039 R 319224 CDS YP_001184430.1 146294006 5078140 3379625..3380281 1 NC_009438.1 KEGG: neu:NE2436 hypothetical protein; hypothetical protein 3380281 5078140 Sputcn32_2914 Shewanella putrefaciens CN-32 hypothetical protein YP_001184430.1 3379625 D 319224 CDS YP_001184431.1 146294007 5078141 complement(3380465..3380923) 1 NC_009438.1 KEGG: vvu:VV10402 predicted transcriptional regulator; XRE family transcriptional regulator 3380923 5078141 Sputcn32_2915 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001184431.1 3380465 R 319224 CDS YP_001184432.1 146294008 5078142 complement(3380920..3382266) 1 NC_009438.1 PFAM: HipA domain protein; KEGG: vvy:VV0798 hypothetical protein; HipA domain-containing protein 3382266 5078142 Sputcn32_2916 Shewanella putrefaciens CN-32 HipA domain-containing protein YP_001184432.1 3380920 R 319224 CDS YP_001184433.1 146294009 5078143 3383263..3383625 1 NC_009438.1 KEGG: she:Shewmr4_3199 hypothetical protein; hypothetical protein 3383625 5078143 Sputcn32_2917 Shewanella putrefaciens CN-32 hypothetical protein YP_001184433.1 3383263 D 319224 CDS YP_001184434.1 146294010 5078144 complement(3383654..3384571) 1 NC_009438.1 PFAM: transposase, IS4 family protein; KEGG: shm:Shewmr7_3098 transposase, IS4 family protein; transposase, IS4 family protein 3384571 5078144 Sputcn32_2918 Shewanella putrefaciens CN-32 transposase, IS4 family protein YP_001184434.1 3383654 R 319224 CDS YP_001184435.1 146294011 5078145 complement(3384696..3385229) 1 NC_009438.1 KEGG: she:Shewmr4_1704 hypothetical protein; hypothetical protein 3385229 5078145 Sputcn32_2919 Shewanella putrefaciens CN-32 hypothetical protein YP_001184435.1 3384696 R 319224 CDS YP_001184436.1 146294012 5078146 complement(3385240..3386826) 1 NC_009438.1 SMART: von Willebrand factor, type A; KEGG: she:Shewmr4_1703 von Willebrand factor, type A; von Willebrand factor type A domain-containing protein 3386826 5078146 Sputcn32_2920 Shewanella putrefaciens CN-32 von Willebrand factor type A domain-containing protein YP_001184436.1 3385240 R 319224 CDS YP_001184437.1 146294013 5078147 complement(3386819..3388288) 1 NC_009438.1 PFAM: ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: she:Shewmr4_1702 ATPase associated with various cellular activities, AAA_5; ATPase 3388288 5078147 Sputcn32_2921 Shewanella putrefaciens CN-32 ATPase YP_001184437.1 3386819 R 319224 CDS YP_001184438.1 146294014 5078148 complement(3388445..3389920) 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: she:Shewmr4_1701 sigma54 specific transcriptional regulator, fis family; sigma-54 dependent trancsriptional regulator 3389920 5078148 Sputcn32_2922 Shewanella putrefaciens CN-32 sigma-54 dependent trancsriptional regulator YP_001184438.1 3388445 R 319224 CDS YP_001184439.1 146294015 5078149 complement(3390066..3390290) 1 NC_009438.1 hypothetical protein 3390290 5078149 Sputcn32_2923 Shewanella putrefaciens CN-32 hypothetical protein YP_001184439.1 3390066 R 319224 CDS YP_001184440.1 146294016 5078151 complement(3390858..3392615) 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pat:Patl_4103 methyltransferase type 12; type 11 methyltransferase 3392615 5078151 Sputcn32_2925 Shewanella putrefaciens CN-32 type 11 methyltransferase YP_001184440.1 3390858 R 319224 CDS YP_001184441.1 146294017 5078154 3394731..3395069 1 NC_009438.1 PFAM: SEC-C motif domain protein; KEGG: ppr:PBPRA1441 hypothetical protein; SecC motif-containing protein 3395069 5078154 Sputcn32_2927 Shewanella putrefaciens CN-32 SecC motif-containing protein YP_001184441.1 3394731 D 319224 CDS YP_001184442.1 146294018 5078155 complement(3395175..3396104) 1 NC_009438.1 KEGG: shm:Shewmr7_1015 hypothetical protein; hypothetical protein 3396104 5078155 Sputcn32_2928 Shewanella putrefaciens CN-32 hypothetical protein YP_001184442.1 3395175 R 319224 CDS YP_001184443.1 146294019 5078156 complement(3396311..3397207) 1 NC_009438.1 PFAM: 3'-5' exonuclease; KEGG: shm:Shewmr7_1014 3'-5' exonuclease; 3'-5' exonuclease 3397207 5078156 Sputcn32_2929 Shewanella putrefaciens CN-32 3'-5' exonuclease YP_001184443.1 3396311 R 319224 CDS YP_001184444.1 146294020 5078157 complement(3397289..3398221) 1 NC_009438.1 PFAM: protein of unknown function DUF808; KEGG: she:Shewmr4_0975 protein of unknown function DUF808; hypothetical protein 3398221 5078157 Sputcn32_2930 Shewanella putrefaciens CN-32 hypothetical protein YP_001184444.1 3397289 R 319224 CDS YP_001184445.1 146294021 5078158 3398452..3399114 1 NC_009438.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 3399114 5078158 Sputcn32_2931 Shewanella putrefaciens CN-32 ribose-5-phosphate isomerase A YP_001184445.1 3398452 D 319224 CDS YP_001184446.1 146294022 5078159 complement(3399297..3400487) 1 NC_009438.1 SMART: PUA domain containing protein; KEGG: son:SO1149 hypothetical SAM-dependent methyltransferase; PUA domain-containing protein 3400487 5078159 Sputcn32_2932 Shewanella putrefaciens CN-32 PUA domain-containing protein YP_001184446.1 3399297 R 319224 CDS YP_001184447.1 146294023 5078160 complement(3400768..3401958) 1 NC_009438.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: she:Shewmr4_0969 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3401958 5078160 Sputcn32_2933 Shewanella putrefaciens CN-32 endonuclease/exonuclease/phosphatase YP_001184447.1 3400768 R 319224 CDS YP_001184448.1 146294024 5078161 3402742..3403455 1 NC_009438.1 KEGG: son:SO1146 hypothetical protein; hypothetical protein 3403455 5078161 Sputcn32_2934 Shewanella putrefaciens CN-32 hypothetical protein YP_001184448.1 3402742 D 319224 CDS YP_001184449.1 146294025 5078162 3403475..3404848 1 NC_009438.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: son:SO1145 magnesium transporter; magnesium transporter 3404848 5078162 Sputcn32_2935 Shewanella putrefaciens CN-32 magnesium transporter YP_001184449.1 3403475 D 319224 CDS YP_001184450.1 146294026 5078163 3405095..3406183 1 NC_009438.1 PFAM: chemotaxis sensory transducer; KEGG: son:SO1144 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis sensory transducer 3406183 5078163 Sputcn32_2936 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184450.1 3405095 D 319224 CDS YP_001184451.1 146294027 5078164 3406380..3407153 1 NC_009438.1 KEGG: son:SO1143 hypothetical protein; hypothetical protein 3407153 5078164 Sputcn32_2937 Shewanella putrefaciens CN-32 hypothetical protein YP_001184451.1 3406380 D 319224 CDS YP_001184452.1 146294028 5078165 complement(3407214..3407924) 1 NC_009438.1 PFAM: pseudouridine synthase; KEGG: sfr:Sfri_3001 pseudouridine synthase; pseudouridine synthase 3407924 5078165 Sputcn32_2938 Shewanella putrefaciens CN-32 pseudouridine synthase YP_001184452.1 3407214 R 319224 CDS YP_001184453.1 146294029 5078166 complement(3408068..3411292) 1 NC_009438.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 3411292 carB 5078166 carB Shewanella putrefaciens CN-32 carbamoyl phosphate synthase large subunit YP_001184453.1 3408068 R 319224 CDS YP_001184454.1 146294030 5078167 complement(3411320..3412480) 1 NC_009438.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 3412480 5078167 Sputcn32_2940 Shewanella putrefaciens CN-32 carbamoyl phosphate synthase small subunit YP_001184454.1 3411320 R 319224 CDS YP_001184455.1 146294031 5078168 complement(3412654..3413466) 1 NC_009438.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 3413466 5078168 Sputcn32_2941 Shewanella putrefaciens CN-32 dihydrodipicolinate reductase YP_001184455.1 3412654 R 319224 CDS YP_001184456.1 146294032 5078169 complement(3413539..3414156) 1 NC_009438.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: she:Shewmr4_0963 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 3414156 5078169 Sputcn32_2942 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001184456.1 3413539 R 319224 CDS YP_001184457.1 146294033 5078170 complement(3414285..3415094) 1 NC_009438.1 PFAM: peptidase M48, Ste24p; KEGG: son:SO1137 hypothetical protein; peptidase M48, Ste24p 3415094 5078170 Sputcn32_2943 Shewanella putrefaciens CN-32 peptidase M48, Ste24p YP_001184457.1 3414285 R 319224 CDS YP_001184458.1 146294034 5078171 complement(3415194..3416510) 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: shm:Shewmr7_0998 DEAD/DEAH box helicase domain protein; DEAD/DEAH box helicase 3416510 5078171 Sputcn32_2944 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001184458.1 3415194 R 319224 CDS YP_001184459.1 146294035 5078172 3416979..3418097 1 NC_009438.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 3418097 gldA 5078172 gldA Shewanella putrefaciens CN-32 glycerol dehydrogenase YP_001184459.1 3416979 D 319224 CDS YP_001184460.1 146294036 5078173 3418315..3419706 1 NC_009438.1 PFAM: aldehyde dehydrogenase; KEGG: ppu:PP_2488 succinic-semialdehyde dehydrogenase, putative; aldehyde dehydrogenase 3419706 5078173 Sputcn32_2946 Shewanella putrefaciens CN-32 aldehyde dehydrogenase YP_001184460.1 3418315 D 319224 CDS YP_001184461.1 146294037 5078174 complement(3419769..3420596) 1 NC_009438.1 PFAM: periplasmic binding protein; KEGG: son:SO3709 ABC transporter, periplasmic substrate-binding protein, putative; periplasmic binding protein 3420596 5078174 Sputcn32_2947 Shewanella putrefaciens CN-32 periplasmic binding protein YP_001184461.1 3419769 R 319224 CDS YP_001184462.1 146294038 5078175 complement(3420613..3421650) 1 NC_009438.1 KEGG: shm:Shewmr7_3175 hypothetical protein; hypothetical protein 3421650 5078175 Sputcn32_2948 Shewanella putrefaciens CN-32 hypothetical protein YP_001184462.1 3420613 R 319224 CDS YP_001184463.1 146294039 5078176 complement(3422601..3423032) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_04843 histone acetyltransferase HPA2/related acetyltransferase; N-acetyltransferase GCN5 3423032 5078176 Sputcn32_2949 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184463.1 3422601 R 319224 CDS YP_001184464.1 146294040 5078177 complement(3423173..3423742) 1 NC_009438.1 hypothetical protein 3423742 5078177 Sputcn32_2950 Shewanella putrefaciens CN-32 hypothetical protein YP_001184464.1 3423173 R 319224 CDS YP_001184465.1 146294041 5078178 complement(3423860..3424303) 1 NC_009438.1 hypothetical protein 3424303 5078178 Sputcn32_2951 Shewanella putrefaciens CN-32 hypothetical protein YP_001184465.1 3423860 R 319224 CDS YP_001184466.1 146294042 5078179 complement(3424379..3424741) 1 NC_009438.1 KEGG: vvy:VV1846 hypothetical protein; hypothetical protein 3424741 5078179 Sputcn32_2952 Shewanella putrefaciens CN-32 hypothetical protein YP_001184466.1 3424379 R 319224 CDS YP_001184467.1 146294043 5078180 complement(3424826..3425191) 1 NC_009438.1 KEGG: plu:plu1148 hypothetical protein; hypothetical protein 3425191 5078180 Sputcn32_2953 Shewanella putrefaciens CN-32 hypothetical protein YP_001184467.1 3424826 R 319224 CDS YP_001184468.1 146294044 5078181 complement(3425851..3426549) 1 NC_009438.1 KEGG: son:SOA0150 hypothetical protein; hypothetical protein 3426549 5078181 Sputcn32_2954 Shewanella putrefaciens CN-32 hypothetical protein YP_001184468.1 3425851 R 319224 CDS YP_001184469.1 146294045 5078182 complement(3427039..3427500) 1 NC_009438.1 hypothetical protein 3427500 5078182 Sputcn32_2955 Shewanella putrefaciens CN-32 hypothetical protein YP_001184469.1 3427039 R 319224 CDS YP_001184470.1 146294046 5078183 complement(3428041..3428268) 1 NC_009438.1 KEGG: son:SO0729 hypothetical protein; hypothetical protein 3428268 5078183 Sputcn32_2956 Shewanella putrefaciens CN-32 hypothetical protein YP_001184470.1 3428041 R 319224 CDS YP_001184471.1 146294047 5078184 complement(3428433..3429056) 1 NC_009438.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 3429056 5078184 Sputcn32_2957 Shewanella putrefaciens CN-32 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_001184471.1 3428433 R 319224 CDS YP_001184472.1 146294048 5078185 complement(3429101..3430705) 1 NC_009438.1 catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase 3430705 5078185 Sputcn32_2958 Shewanella putrefaciens CN-32 cobyric acid synthase YP_001184472.1 3429101 R 319224 CDS YP_001184473.1 146294049 5078186 complement(3430792..3431403) 1 NC_009438.1 PFAM: cobalbumin biosynthesis enzyme; KEGG: shm:Shewmr7_3178 cobalbumin biosynthesis enzyme; cobalbumin biosynthesis protein 3431403 5078186 Sputcn32_2959 Shewanella putrefaciens CN-32 cobalbumin biosynthesis protein YP_001184473.1 3430792 R 319224 CDS YP_001184474.1 146294050 5078187 complement(3431400..3432188) 1 NC_009438.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase 3432188 cobS 5078187 cobS Shewanella putrefaciens CN-32 cobalamin synthase YP_001184474.1 3431400 R 319224 CDS YP_001184475.1 146294051 5079856 complement(3432296..3433348) 1 NC_009438.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3433348 cobT 5079856 cobT Shewanella putrefaciens CN-32 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_001184475.1 3432296 R 319224 CDS YP_001184476.1 146294052 5079857 complement(3433427..3434554) 1 NC_009438.1 PFAM: transport system permease protein; KEGG: she:Shewmr4_0841 transport system permease protein; transport system permease 3434554 5079857 Sputcn32_2962 Shewanella putrefaciens CN-32 transport system permease YP_001184476.1 3433427 R 319224 CDS YP_001184477.1 146294053 5079858 complement(3434554..3435435) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO1033 iron-compound ABC transporter, ATP-binding protein, putative; ABC transporter-like protein 3435435 5079858 Sputcn32_2963 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184477.1 3434554 R 319224 CDS YP_001184478.1 146294054 5079859 complement(3435955..3436680) 1 NC_009438.1 PFAM: Phosphoglycerate mutase; KEGG: she:Shewmr4_0839 phosphoglycerate mutase; phosphoglycerate mutase 3436680 5079859 Sputcn32_2964 Shewanella putrefaciens CN-32 phosphoglycerate mutase YP_001184478.1 3435955 R 319224 CDS YP_001184479.1 146294055 5079860 3436965..3440699 1 NC_009438.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 3440699 metH 5079860 metH Shewanella putrefaciens CN-32 B12-dependent methionine synthase YP_001184479.1 3436965 D 319224 CDS YP_001184480.1 146294056 5079861 complement(3441234..3441644) 1 NC_009438.1 hypothetical protein 3441644 5079861 Sputcn32_2966 Shewanella putrefaciens CN-32 hypothetical protein YP_001184480.1 3441234 R 319224 CDS YP_001184481.1 146294057 5079862 complement(3441712..3442143) 1 NC_009438.1 hypothetical protein 3442143 5079862 Sputcn32_2967 Shewanella putrefaciens CN-32 hypothetical protein YP_001184481.1 3441712 R 319224 CDS YP_001184482.1 146294058 5079863 complement(3442188..3443729) 1 NC_009438.1 KEGG: mes:Meso_0922 hypothetical protein; hypothetical protein 3443729 5079863 Sputcn32_2968 Shewanella putrefaciens CN-32 hypothetical protein YP_001184482.1 3442188 R 319224 CDS YP_001184483.1 146294059 5079864 3444558..3445880 1 NC_009438.1 KEGG: pfo:Pfl_4766 chemotaxis sensory transducer, PAS/Pac sensor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer 3445880 5079864 Sputcn32_2969 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184483.1 3444558 D 319224 CDS YP_001184484.1 146294060 5079865 complement(3446004..3447134) 1 NC_009438.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 3447134 5079865 Sputcn32_2970 Shewanella putrefaciens CN-32 chaperone protein DnaJ YP_001184484.1 3446004 R 319224 CDS YP_001184485.1 146294061 5079866 complement(3447265..3449184) 1 NC_009438.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 3449184 dnaK 5079866 dnaK Shewanella putrefaciens CN-32 molecular chaperone DnaK YP_001184485.1 3447265 R 319224 CDS YP_001184486.1 146294062 5079867 3449474..3450409 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: she:Shewmr4_0956 protein of unknown function DUF6, transmembrane; hypothetical protein 3450409 5079867 Sputcn32_2972 Shewanella putrefaciens CN-32 hypothetical protein YP_001184486.1 3449474 D 319224 CDS YP_001184487.1 146294063 5079868 3450548..3451024 1 NC_009438.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: son:SO1124 conserved hypothetical protein TIGR00011; ybaK/ebsC protein 3451024 5079868 Sputcn32_2973 Shewanella putrefaciens CN-32 ybaK/ebsC protein YP_001184487.1 3450548 D 319224 CDS YP_001184488.1 146294064 5079869 3451152..3451454 1 NC_009438.1 KEGG: she:Shewmr4_0954 hypothetical protein; hypothetical protein 3451454 5079869 Sputcn32_2974 Shewanella putrefaciens CN-32 hypothetical protein YP_001184488.1 3451152 D 319224 CDS YP_001184489.1 146294065 5079870 complement(3451539..3452807) 1 NC_009438.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3452807 proA 5079870 proA Shewanella putrefaciens CN-32 gamma-glutamyl phosphate reductase YP_001184489.1 3451539 R 319224 CDS YP_001184490.1 146294066 5079871 complement(3452829..3453947) 1 NC_009438.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3453947 5079871 Sputcn32_2976 Shewanella putrefaciens CN-32 gamma-glutamyl kinase YP_001184490.1 3452829 R 319224 CDS YP_001184491.1 146294067 5079872 complement(3454149..3455438) 1 NC_009438.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: shm:Shewmr7_0989 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 3455438 5079872 Sputcn32_2977 Shewanella putrefaciens CN-32 xanthine/uracil/vitamin C permease YP_001184491.1 3454149 R 319224 CDS YP_001184492.1 146294068 5079873 complement(3455614..3455949) 1 NC_009438.1 KEGG: son:SO3679 hypothetical protein; hypothetical protein 3455949 5079873 Sputcn32_2978 Shewanella putrefaciens CN-32 hypothetical protein YP_001184492.1 3455614 R 319224 CDS YP_001184493.1 146294069 5079874 3456295..3457152 1 NC_009438.1 KEGG: she:Shewmr4_0876 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3457152 5079874 Sputcn32_2979 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001184493.1 3456295 D 319224 CDS YP_001184494.1 146294070 5079875 complement(3457171..3457602) 1 NC_009438.1 PFAM: UspA domain protein; KEGG: shm:Shewmr7_3148 UspA domain protein; UspA domain-containing protein 3457602 5079875 Sputcn32_2980 Shewanella putrefaciens CN-32 UspA domain-containing protein YP_001184494.1 3457171 R 319224 CDS YP_001184495.1 146294071 5079876 complement(3457666..3458049) 1 NC_009438.1 KEGG: she:Shewmr4_0873 hypothetical protein; hypothetical protein 3458049 5079876 Sputcn32_2981 Shewanella putrefaciens CN-32 hypothetical protein YP_001184495.1 3457666 R 319224 CDS YP_001184496.1 146294072 5079877 3458272..3459696 1 NC_009438.1 PFAM: aldehyde dehydrogenase; KEGG: shm:Shewmr7_3150 aldehyde dehydrogenase; aldehyde dehydrogenase 3459696 5079877 Sputcn32_2982 Shewanella putrefaciens CN-32 aldehyde dehydrogenase YP_001184496.1 3458272 D 319224 CDS YP_001184497.1 146294073 5079878 3459747..3460319 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: she:Shewmr4_0871 transcriptional regulator, TetR family; TetR family transcriptional regulator 3460319 5079878 Sputcn32_2983 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001184497.1 3459747 D 319224 CDS YP_001184498.1 146294074 5079879 complement(3460421..3461227) 1 NC_009438.1 PFAM: Curli production assembly/transport component CsgG; KEGG: shm:Shewmr7_3152 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 3461227 5079879 Sputcn32_2984 Shewanella putrefaciens CN-32 curli production assembly/transport component CsgG YP_001184498.1 3460421 R 319224 CDS YP_001184499.1 146294075 5079880 complement(3461227..3461622) 1 NC_009438.1 KEGG: she:Shewmr4_0869 curli production assembly/transport component CsgF, putative; curli production assembly/transport component CsgF 3461622 5079880 Sputcn32_2985 Shewanella putrefaciens CN-32 curli production assembly/transport component CsgF YP_001184499.1 3461227 R 319224 CDS YP_001184500.1 146294076 5079881 complement(3461633..3462043) 1 NC_009438.1 KEGG: she:Shewmr4_0868 curli production assembly/transport component CsgE, putative; curli production assembly/transport component CsgE 3462043 5079881 Sputcn32_2986 Shewanella putrefaciens CN-32 curli production assembly/transport component CsgE YP_001184500.1 3461633 R 319224 CDS YP_001184501.1 146294077 5079882 complement(3462339..3464027) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO3688 nitrogen regulation protein NtrY, putative; integral membrane sensor signal transduction histidine kinase 3464027 5079882 Sputcn32_2987 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001184501.1 3462339 R 319224 CDS YP_001184502.1 146294078 5079884 complement(3465649..3466848) 1 NC_009438.1 PFAM: protein of unknown function DUF214; KEGG: sdn:Sden_2848 protein of unknown function DUF214; hypothetical protein 3466848 5079884 Sputcn32_2989 Shewanella putrefaciens CN-32 hypothetical protein YP_001184502.1 3465649 R 319224 CDS YP_001184503.1 146294079 5079885 complement(3466859..3468169) 1 NC_009438.1 PFAM: protein of unknown function DUF214; KEGG: sdn:Sden_2849 protein of unknown function DUF214; hypothetical protein 3468169 5079885 Sputcn32_2990 Shewanella putrefaciens CN-32 hypothetical protein YP_001184503.1 3466859 R 319224 CDS YP_001184504.1 146294080 5079886 complement(3468181..3468921) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3159 ABC transporter related; ABC transporter-like protein 3468921 5079886 Sputcn32_2991 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184504.1 3468181 R 319224 CDS YP_001184505.1 146294081 5079887 complement(3469018..3469281) 1 NC_009438.1 KEGG: shm:Shewmr7_3160 hypothetical protein; hypothetical protein 3469281 5079887 Sputcn32_2992 Shewanella putrefaciens CN-32 hypothetical protein YP_001184505.1 3469018 R 319224 CDS YP_001184506.1 146294082 5079888 complement(3469370..3470677) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: she:Shewmr4_0861 efflux transporter, RND family, MFP subunit; RND family efflux transporter MFP subunit 3470677 5079888 Sputcn32_2993 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184506.1 3469370 R 319224 CDS YP_001184507.1 146294083 5079889 3471254..3472285 1 NC_009438.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 3472285 5079889 Sputcn32_2994 Shewanella putrefaciens CN-32 dihydroorotase YP_001184507.1 3471254 D 319224 CDS YP_001184508.1 146294084 5079890 3472418..3473464 1 NC_009438.1 KEGG: son:SO3696 hypothetical protein; hypothetical protein 3473464 5079890 Sputcn32_2995 Shewanella putrefaciens CN-32 hypothetical protein YP_001184508.1 3472418 D 319224 CDS YP_001184509.1 146294085 5079891 3473860..3474153 1 NC_009438.1 KEGG: shm:Shewmr7_3165 hypothetical protein; hypothetical protein 3474153 5079891 Sputcn32_2996 Shewanella putrefaciens CN-32 hypothetical protein YP_001184509.1 3473860 D 319224 CDS YP_001184510.1 146294086 5079892 3474853..3475212 1 NC_009438.1 KEGG: sdn:Sden_1048 hypothetical protein; hypothetical protein 3475212 5079892 Sputcn32_2997 Shewanella putrefaciens CN-32 hypothetical protein YP_001184510.1 3474853 D 319224 CDS YP_001184511.1 146294087 5079894 3476601..3476873 1 NC_009438.1 hypothetical protein 3476873 5079894 Sputcn32_2999 Shewanella putrefaciens CN-32 hypothetical protein YP_001184511.1 3476601 D 319224 CDS YP_001184512.1 146294088 5079895 3477746..3478558 1 NC_009438.1 KEGG: zmo:ZMO1197 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu racemase; glutamate racemase 3478558 5079895 Sputcn32_3000 Shewanella putrefaciens CN-32 glutamate racemase YP_001184512.1 3477746 D 319224 CDS YP_001184513.1 146294089 5079896 3478801..3480855 1 NC_009438.1 KEGG: she:Shewmr4_0079 MORN variant repeat protein; MORN repeat-containing protein 3480855 5079896 Sputcn32_3001 Shewanella putrefaciens CN-32 MORN repeat-containing protein YP_001184513.1 3478801 D 319224 CDS YP_001184514.1 146294090 5079897 complement(3481134..3481592) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_1748 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3481592 5079897 Sputcn32_3002 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184514.1 3481134 R 319224 CDS YP_001184515.1 146294091 5079898 3481710..3483173 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; aminotransferase, class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family; GntR family transcriptional regulator 3483173 5079898 Sputcn32_3003 Shewanella putrefaciens CN-32 GntR family transcriptional regulator YP_001184515.1 3481710 D 319224 CDS YP_001184516.1 146294092 5079899 complement(3483183..3483566) 1 NC_009438.1 KEGG: son:SO3708 hypothetical protein; hypothetical protein 3483566 5079899 Sputcn32_3004 Shewanella putrefaciens CN-32 hypothetical protein YP_001184516.1 3483183 R 319224 CDS YP_001184517.1 146294093 5079900 complement(3483600..3484322) 1 NC_009438.1 PFAM: Abortive infection protein; KEGG: pat:Patl_0909 hypothetical protein; abortive infection protein 3484322 5079900 Sputcn32_3005 Shewanella putrefaciens CN-32 abortive infection protein YP_001184517.1 3483600 R 319224 CDS YP_001184518.1 146294094 5079901 complement(3484523..3485518) 1 NC_009438.1 PFAM: dienelactone hydrolase; KEGG: son:SO1006 dienelactone hydrolase family protein; dienelactone hydrolase 3485518 5079901 Sputcn32_3006 Shewanella putrefaciens CN-32 dienelactone hydrolase YP_001184518.1 3484523 R 319224 CDS YP_001184519.1 146294095 5079902 complement(3485769..3485996) 1 NC_009438.1 KEGG: sdn:Sden_3091 hypothetical protein; hypothetical protein 3485996 5079902 Sputcn32_3007 Shewanella putrefaciens CN-32 hypothetical protein YP_001184519.1 3485769 R 319224 CDS YP_001184520.1 146294096 5079903 complement(3486112..3486549) 1 NC_009438.1 TIGRFAM: uncharacterized domain 1; PFAM: thioesterase superfamily protein; KEGG: shm:Shewmr7_0943 uncharacterized domain 1; hypothetical protein 3486549 5079903 Sputcn32_3008 Shewanella putrefaciens CN-32 hypothetical protein YP_001184520.1 3486112 R 319224 CDS YP_001184521.1 146294097 5079904 complement(3486776..3489406) 1 NC_009438.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: she:Shewmr4_3033 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3489406 5079904 Sputcn32_3009 Shewanella putrefaciens CN-32 endonuclease/exonuclease/phosphatase YP_001184521.1 3486776 R 319224 CDS YP_001184522.1 146294098 5079905 complement(3489885..3490655) 1 NC_009438.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: she:Shewmr4_3034 peptidylprolyl isomerase, FKBP-type; peptidylprolyl isomerase, FKBP-type 3490655 5079905 Sputcn32_3010 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001184522.1 3489885 R 319224 CDS YP_001184523.1 146294099 5079906 3490810..3491760 1 NC_009438.1 PFAM: WD-40 repeat protein; KEGG: son:SO1064 hypothetical WD domain protein; WD-40 repeat-containing protein 3491760 5079906 Sputcn32_3011 Shewanella putrefaciens CN-32 WD-40 repeat-containing protein YP_001184523.1 3490810 D 319224 CDS YP_001184524.1 146294100 5079754 3491770..3491982 1 NC_009438.1 PFAM: SlyX family protein; KEGG: she:Shewmr4_3036 SlyX family protein; SlyX family protein 3491982 5079754 Sputcn32_3012 Shewanella putrefaciens CN-32 SlyX family protein YP_001184524.1 3491770 D 319224 CDS YP_001184525.1 146294101 5079755 3492036..3492581 1 NC_009438.1 KEGG: she:Shewmr4_3037 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 3492581 5079755 Sputcn32_3013 Shewanella putrefaciens CN-32 peptide deformylase YP_001184525.1 3492036 D 319224 CDS YP_001184526.1 146294102 5079756 3492581..3493984 1 NC_009438.1 PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: son:SO1061 TPR domain protein; hypothetical protein 3493984 5079756 Sputcn32_3014 Shewanella putrefaciens CN-32 hypothetical protein YP_001184526.1 3492581 D 319224 CDS YP_001184527.1 146294103 5079757 3494042..3494647 1 NC_009438.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: shm:Shewmr7_0935 hypothetical protein; membrane lipoprotein lipid attachment site 3494647 5079757 Sputcn32_3015 Shewanella putrefaciens CN-32 membrane lipoprotein lipid attachment site YP_001184527.1 3494042 D 319224 CDS YP_001184528.1 146294104 5079758 3494904..3497537 1 NC_009438.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1, membrane alanine aminopeptidase; KEGG: shm:Shewmr7_0932 aminopeptidase N; aminopeptidase N 3497537 5079758 Sputcn32_3016 Shewanella putrefaciens CN-32 aminopeptidase N YP_001184528.1 3494904 D 319224 CDS YP_001184529.1 146294105 5079759 3497747..3499639 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: she:Shewmr4_3042 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3499639 5079759 Sputcn32_3017 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184529.1 3497747 D 319224 CDS YP_001184530.1 146294106 5079760 complement(3499767..3501194) 1 NC_009438.1 KEGG: shm:Shewmr7_0929 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 3501194 5079760 Sputcn32_3018 Shewanella putrefaciens CN-32 PAS/PAC sensor-containing diguanylate cyclase YP_001184530.1 3499767 R 319224 CDS YP_001184531.1 146294107 5079761 3501588..3502484 1 NC_009438.1 PFAM: protein of unknown function DUF72; KEGG: shm:Shewmr7_0928 protein of unknown function DUF72; hypothetical protein 3502484 5079761 Sputcn32_3019 Shewanella putrefaciens CN-32 hypothetical protein YP_001184531.1 3501588 D 319224 CDS YP_001184532.1 146294108 5079762 complement(3502694..3504163) 1 NC_009438.1 PFAM: phosphate transporter; KEGG: shm:Shewmr7_0927 phosphate transporter; phosphate transporter 3504163 5079762 Sputcn32_3020 Shewanella putrefaciens CN-32 phosphate transporter YP_001184532.1 3502694 R 319224 CDS YP_001184533.1 146294109 5079763 complement(3504620..3506404) 1 NC_009438.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 3506404 mdoD 5079763 mdoD Shewanella putrefaciens CN-32 glucan biosynthesis protein D YP_001184533.1 3504620 R 319224 CDS YP_001184534.1 146294110 5079764 complement(3506561..3508033) 1 NC_009438.1 PFAM: carbon starvation protein CstA; KEGG: shm:Shewmr7_0925 carbon starvation protein CstA; carbon starvation protein CstA 3508033 5079764 Sputcn32_3022 Shewanella putrefaciens CN-32 carbon starvation protein CstA YP_001184534.1 3506561 R 319224 CDS YP_001184535.1 146294111 5079765 complement(3508146..3508649) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO1049 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3508649 5079765 Sputcn32_3023 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184535.1 3508146 R 319224 CDS YP_001184536.1 146294112 5079766 complement(3508797..3509516) 1 NC_009438.1 PFAM: LrgB family protein; KEGG: shm:Shewmr7_0923 LrgB family protein; LrgB family protein 3509516 5079766 Sputcn32_3024 Shewanella putrefaciens CN-32 LrgB family protein YP_001184536.1 3508797 R 319224 CDS YP_001184537.1 146294113 5079767 complement(3509519..3509953) 1 NC_009438.1 PFAM: LrgA family protein; KEGG: shm:Shewmr7_0922 LrgA family protein; LrgA family protein 3509953 5079767 Sputcn32_3025 Shewanella putrefaciens CN-32 LrgA family protein YP_001184537.1 3509519 R 319224 CDS YP_001184538.1 146294114 5079768 3510076..3510966 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO1046 transcriptional regulator, LysR family; LysR family transcriptional regulator 3510966 5079768 Sputcn32_3026 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184538.1 3510076 D 319224 CDS YP_001184539.1 146294115 5079769 3511391..3512125 1 NC_009438.1 PFAM: extracellular solute-binding protein, family 3; KEGG: shm:Shewmr7_0919 extracellular solute-binding protein, family 3; extracellular solute-binding protein 3512125 5079769 Sputcn32_3027 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001184539.1 3511391 D 319224 CDS YP_001184540.1 146294116 5079770 3512133..3512813 1 NC_009438.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO1043 amino acid ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 3512813 5079770 Sputcn32_3028 Shewanella putrefaciens CN-32 polar amino acid ABC transporter inner membrane subunit YP_001184540.1 3512133 D 319224 CDS YP_001184541.1 146294117 5079771 3512806..3513531 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_0917 ABC transporter related; ABC transporter-like protein 3513531 5079771 Sputcn32_3029 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184541.1 3512806 D 319224 CDS YP_001184542.1 146294118 5079772 complement(3514011..3514748) 1 NC_009438.1 hypothetical protein 3514748 5079772 Sputcn32_3030 Shewanella putrefaciens CN-32 hypothetical protein YP_001184542.1 3514011 R 319224 CDS YP_001184543.1 146294119 5079773 complement(3514874..3515161) 1 NC_009438.1 KEGG: pfl:PFL_3339 hypothetical protein; hypothetical protein 3515161 5079773 Sputcn32_3031 Shewanella putrefaciens CN-32 hypothetical protein YP_001184543.1 3514874 R 319224 CDS YP_001184544.1 146294120 5079774 complement(3515352..3515726) 1 NC_009438.1 KEGG: rba:RB954 hypothetical protein; hypothetical protein 3515726 5079774 Sputcn32_3032 Shewanella putrefaciens CN-32 hypothetical protein YP_001184544.1 3515352 R 319224 CDS YP_001184545.1 146294121 5079775 complement(3515786..3515944) 1 NC_009438.1 KEGG: son:SO1508 hypothetical protein; hypothetical protein 3515944 5079775 Sputcn32_3033 Shewanella putrefaciens CN-32 hypothetical protein YP_001184545.1 3515786 R 319224 CDS YP_001184546.1 146294122 5079776 3516076..3516729 1 NC_009438.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; dihydropteridine reductase 3516729 5079776 Sputcn32_3034 Shewanella putrefaciens CN-32 dihydropteridine reductase YP_001184546.1 3516076 D 319224 CDS YP_001184547.1 146294123 5079777 3517043..3517687 1 NC_009438.1 PFAM: heat shock protein DnaJ domain protein; KEGG: shm:Shewmr7_0910 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 3517687 5079777 Sputcn32_3035 Shewanella putrefaciens CN-32 heat shock protein DnaJ domain-containing protein YP_001184547.1 3517043 D 319224 CDS YP_001184548.1 146294124 5079778 3517991..3518743 1 NC_009438.1 PFAM: DSBA oxidoreductase; KEGG: shm:Shewmr7_0909 DsbA oxidoreductase; DSBA oxidoreductase 3518743 5079778 Sputcn32_3036 Shewanella putrefaciens CN-32 DSBA oxidoreductase YP_001184548.1 3517991 D 319224 CDS YP_001184549.1 146294125 5079779 complement(3518792..3519337) 1 NC_009438.1 KEGG: son:SO3719 hypothetical protein; hypothetical protein 3519337 5079779 Sputcn32_3037 Shewanella putrefaciens CN-32 hypothetical protein YP_001184549.1 3518792 R 319224 CDS YP_001184550.1 146294126 5079780 complement(3519371..3519892) 1 NC_009438.1 KEGG: shm:Shewmr7_0906 protoporphyrinogen oxidase; protoporphyrinogen oxidase 3519892 5079780 Sputcn32_3038 Shewanella putrefaciens CN-32 protoporphyrinogen oxidase YP_001184550.1 3519371 R 319224 CDS YP_001184551.1 146294127 5079781 3520361..3521200 1 NC_009438.1 KEGG: shm:Shewmr7_0904 hypothetical protein; hypothetical protein 3521200 5079781 Sputcn32_3039 Shewanella putrefaciens CN-32 hypothetical protein YP_001184551.1 3520361 D 319224 CDS YP_001184552.1 146294128 5079782 complement(3521258..3521875) 1 NC_009438.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 3521875 5079782 Sputcn32_3040 Shewanella putrefaciens CN-32 adenylylsulfate kinase YP_001184552.1 3521258 R 319224 CDS YP_001184553.1 146294129 5079783 complement(3521940..3523664) 1 NC_009438.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: shm:Shewmr7_0902 TrkA-C domain protein; TrkA domain-containing protein 3523664 5079783 Sputcn32_3041 Shewanella putrefaciens CN-32 TrkA domain-containing protein YP_001184553.1 3521940 R 319224 CDS YP_001184554.1 146294130 5079784 complement(3523668..3525110) 1 NC_009438.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 3525110 cysN 5079784 cysN Shewanella putrefaciens CN-32 sulfate adenylyltransferase subunit 1 YP_001184554.1 3523668 R 319224 CDS YP_001184555.1 146294131 5079785 complement(3525193..3526101) 1 NC_009438.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3526101 5079785 Sputcn32_3043 Shewanella putrefaciens CN-32 sulfate adenylyltransferase subunit 2 YP_001184555.1 3525193 R 319224 CDS YP_001184556.1 146294132 5079786 complement(3526167..3527000) 1 NC_009438.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: shm:Shewmr7_0899 uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 3527000 5079786 Sputcn32_3044 Shewanella putrefaciens CN-32 uroporphyrin-III C-methyltransferase YP_001184556.1 3526167 R 319224 CDS YP_001184557.1 146294133 5079787 3527439..3528320 1 NC_009438.1 PFAM: phospholipase A1; KEGG: shm:Shewmr7_0898 phospholipase A(1); phospholipase A(1) 3528320 5079787 Sputcn32_3045 Shewanella putrefaciens CN-32 phospholipase A(1) YP_001184557.1 3527439 D 319224 CDS YP_001184558.1 146294134 5079788 3528562..3530127 1 NC_009438.1 PFAM: peptidase S41; KEGG: she:Shewmr4_3075 hypothetical protein; peptidase S41 3530127 5079788 Sputcn32_3046 Shewanella putrefaciens CN-32 peptidase S41 YP_001184558.1 3528562 D 319224 CDS YP_001184559.1 146294135 5079789 complement(3530182..3531150) 1 NC_009438.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 3531150 pbpG 5079789 pbpG Shewanella putrefaciens CN-32 D-alanyl-D-alanine endopeptidase YP_001184559.1 3530182 R 319224 CDS YP_001184560.1 146294136 5079790 3531711..3531950 1 NC_009438.1 KEGG: son:SO0994 hypothetical protein; hypothetical protein 3531950 5079790 Sputcn32_3048 Shewanella putrefaciens CN-32 hypothetical protein YP_001184560.1 3531711 D 319224 CDS YP_001184561.1 146294137 5079791 complement(3532061..3533563) 1 NC_009438.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 3533563 lysS 5079791 lysS Shewanella putrefaciens CN-32 lysyl-tRNA synthetase YP_001184561.1 3532061 R 319224 CDS YP_001184562.1 146294138 5079792 complement(3533593..3534651) 1 NC_009438.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: shm:Shewmr7_3197 peptide chain release factor 2; peptide chain release factor 2 3534651 5079792 Sputcn32_3050 Shewanella putrefaciens CN-32 peptide chain release factor 2 YP_001184562.1 3533593 R 319224 CDS YP_001184563.1 146294139 5079793 3535188..3539462 1 NC_009438.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: shm:Shewmr7_3198 formate dehydrogenase, alpha subunit; formate dehydrogenase subunit alpha 3539462 5079793 Sputcn32_3051 Shewanella putrefaciens CN-32 formate dehydrogenase subunit alpha YP_001184563.1 3535188 D 319224 CDS YP_001184564.1 146294140 5079794 complement(3539538..3541202) 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: shm:Shewmr7_3199 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3541202 5079794 Sputcn32_3052 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184564.1 3539538 R 319224 CDS YP_001184565.1 146294141 5079795 complement(3541338..3542489) 1 NC_009438.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: she:Shewmr4_0823 chromate transporter, chromate ion transporter (CHR) family; chromate transporter 3542489 5079795 Sputcn32_3053 Shewanella putrefaciens CN-32 chromate transporter YP_001184565.1 3541338 R 319224 CDS YP_001184566.1 146294142 5079796 complement(3542618..3543787) 1 NC_009438.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 3543787 rumB 5079796 rumB Shewanella putrefaciens CN-32 23S rRNA methyluridine methyltransferase YP_001184566.1 3542618 R 319224 CDS YP_001184567.1 146294143 5079797 complement(3543864..3545039) 1 NC_009438.1 PFAM: FAD dependent oxidoreductase; KEGG: shm:Shewmr7_3207 FAD dependent oxidoreductase; FAD dependent oxidoreductase 3545039 5079797 Sputcn32_3055 Shewanella putrefaciens CN-32 FAD dependent oxidoreductase YP_001184567.1 3543864 R 319224 CDS YP_001184568.1 146294144 5079798 complement(3545145..3545651) 1 NC_009438.1 PFAM: regulatory protein, MarR; KEGG: she:Shewmr4_0815 transcriptional regulator, MarR family; MarR family transcriptional regulator 3545651 5079798 Sputcn32_3056 Shewanella putrefaciens CN-32 MarR family transcriptional regulator YP_001184568.1 3545145 R 319224 CDS YP_001184569.1 146294145 5079799 3545786..3546211 1 NC_009438.1 PFAM: OsmC family protein; KEGG: shm:Shewmr7_3209 OsmC family protein; OsmC family protein 3546211 5079799 Sputcn32_3057 Shewanella putrefaciens CN-32 OsmC family protein YP_001184569.1 3545786 D 319224 CDS YP_001184570.1 146294146 5079800 3546439..3547860 1 NC_009438.1 KEGG: son:SO0975 hypothetical protein; hypothetical protein 3547860 5079800 Sputcn32_3058 Shewanella putrefaciens CN-32 hypothetical protein YP_001184570.1 3546439 D 319224 CDS YP_001184571.1 146294147 5079801 3547945..3548130 1 NC_009438.1 KEGG: shm:Shewmr7_3211 hypothetical protein; hypothetical protein 3548130 5079801 Sputcn32_3059 Shewanella putrefaciens CN-32 hypothetical protein YP_001184571.1 3547945 D 319224 CDS YP_001184572.1 146294148 5079802 complement(3548247..3549983) 1 NC_009438.1 KEGG: son:SO3733 hypothetical protein; hypothetical protein 3549983 5079802 Sputcn32_3060 Shewanella putrefaciens CN-32 hypothetical protein YP_001184572.1 3548247 R 319224 CDS YP_001184573.1 146294149 5079803 complement(3550239..3551024) 1 NC_009438.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 3551024 mtgA 5079803 mtgA Shewanella putrefaciens CN-32 monofunctional biosynthetic peptidoglycan transglycosylase YP_001184573.1 3550239 R 319224 CDS YP_001184574.1 146294150 5079804 complement(3551606..3552388) 1 NC_009438.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 3552388 5079804 Sputcn32_3062 Shewanella putrefaciens CN-32 phosphoadenosine phosphosulfate reductase YP_001184574.1 3551606 R 319224 CDS YP_001184575.1 146294151 5079703 complement(3552381..3554078) 1 NC_009438.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 3554078 5079703 Sputcn32_3063 Shewanella putrefaciens CN-32 sulfite reductase subunit beta YP_001184575.1 3552381 R 319224 CDS YP_001184576.1 146294152 5079704 complement(3554178..3555977) 1 NC_009438.1 TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: she:Shewmr4_3080 sulfite reductase (NADPH) flavoprotein, alpha chain; sulfite reductase (NADPH) flavoprotein, alpha chain 3555977 5079704 Sputcn32_3064 Shewanella putrefaciens CN-32 sulfite reductase (NADPH) flavoprotein, alpha chain YP_001184576.1 3554178 R 319224 CDS YP_001184577.1 146294153 5079705 3556398..3557924 1 NC_009438.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 3557924 pntA 5079705 pntA Shewanella putrefaciens CN-32 NAD(P) transhydrogenase subunit alpha YP_001184577.1 3556398 D 319224 CDS YP_001184578.1 146294154 5079706 3557936..3559420 1 NC_009438.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 3559420 pntB 5079706 pntB Shewanella putrefaciens CN-32 pyridine nucleotide transhydrogenase YP_001184578.1 3557936 D 319224 CDS YP_001184579.1 146294155 5079707 complement(3559528..3560007) 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: shm:Shewmr7_0888 transcriptional regulator, TetR family; TetR family transcriptional regulator 3560007 5079707 Sputcn32_3067 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001184579.1 3559528 R 319224 CDS YP_001184580.1 146294156 5079708 complement(3560160..3560987) 1 NC_009438.1 KEGG: son:SO3744 hypothetical protein; hypothetical protein 3560987 5079708 Sputcn32_3068 Shewanella putrefaciens CN-32 hypothetical protein YP_001184580.1 3560160 R 319224 CDS YP_001184581.1 146294157 5079709 complement(3560984..3562414) 1 NC_009438.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3562414 5079709 Sputcn32_3069 Shewanella putrefaciens CN-32 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_001184581.1 3560984 R 319224 CDS YP_001184582.1 146294158 5079710 3562572..3563444 1 NC_009438.1 TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; KEGG: son:SO3746 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 3563444 5079710 Sputcn32_3070 Shewanella putrefaciens CN-32 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_001184582.1 3562572 D 319224 CDS YP_001184583.1 146294159 5079711 complement(3563511..3565235) 1 NC_009438.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 3565235 5079711 Sputcn32_3071 Shewanella putrefaciens CN-32 potassium/proton antiporter YP_001184583.1 3563511 R 319224 CDS YP_001184584.1 146294160 5079712 3565847..3568132 1 NC_009438.1 KEGG: shm:Shewmr7_0883 putative nitric oxide reductase (subunit B) transmembrane protein; putative nitric oxide reductase (subunit B) transmembrane protein 3568132 5079712 Sputcn32_3072 Shewanella putrefaciens CN-32 putative nitric oxide reductase (subunit B) transmembrane protein YP_001184584.1 3565847 D 319224 CDS YP_001184585.1 146294161 5079713 3568359..3569912 1 NC_009438.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 3569912 5079713 Sputcn32_3073 Shewanella putrefaciens CN-32 anaerobic nitric oxide reductase transcriptional regulator YP_001184585.1 3568359 D 319224 CDS YP_001184586.1 146294162 5079714 3570084..3570998 1 NC_009438.1 PFAM: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein; KEGG: son:SO3748 LysM domain protein; ErfK/YbiS/YcfS/YnhG family protein 3570998 5079714 Sputcn32_3074 Shewanella putrefaciens CN-32 ErfK/YbiS/YcfS/YnhG family protein YP_001184586.1 3570084 D 319224 CDS YP_001184587.1 146294163 5079715 complement(3571061..3571888) 1 NC_009438.1 KEGG: shm:Shewmr7_0880 hypothetical protein; hypothetical protein 3571888 5079715 Sputcn32_3075 Shewanella putrefaciens CN-32 hypothetical protein YP_001184587.1 3571061 R 319224 CDS YP_001184588.1 146294164 5079716 3572132..3573349 1 NC_009438.1 PFAM: AFG1-family ATPase; KEGG: she:Shewmr4_3102 AFG1-family ATPase; AFG1 family ATPase 3573349 5079716 Sputcn32_3076 Shewanella putrefaciens CN-32 AFG1 family ATPase YP_001184588.1 3572132 D 319224 CDS YP_001184589.1 146294165 5079717 complement(3573377..3574060) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: psb:Psyr_2051 response regulator receiver:transcriptional regulatory protein, C-terminal; two component transcriptional regulator 3574060 5079717 Sputcn32_3077 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001184589.1 3573377 R 319224 CDS YP_001184590.1 146294166 5079718 complement(3574110..3576770) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Osmosensitive K+ channel His kinase sensor; KEGG: xom:XOO_3621 two-component system sensor protein; osmosensitive K+ channel signal transduction histidine kinase 3576770 5079718 Sputcn32_3078 Shewanella putrefaciens CN-32 osmosensitive K+ channel signal transduction histidine kinase YP_001184590.1 3574110 R 319224 CDS YP_001184591.1 146294167 5079719 complement(3576773..3577543) 1 NC_009438.1 KEGG: pfo:Pfl_3155 hypothetical protein; hypothetical protein 3577543 5079719 Sputcn32_3079 Shewanella putrefaciens CN-32 hypothetical protein YP_001184591.1 3576773 R 319224 CDS YP_001184592.1 146294168 5079720 complement(3577578..3578177) 1 NC_009438.1 KEGG: mca:MCA2215 K+-transporting ATPase, C subunit; TIGRFAM: potassium-transporting ATPase, C subunit; PFAM: K+ transporting ATPase, KdpC subunit; potassium-transporting ATPase subunit C 3578177 5079720 Sputcn32_3080 Shewanella putrefaciens CN-32 potassium-transporting ATPase subunit C YP_001184592.1 3577578 R 319224 CDS YP_001184593.1 146294169 5079721 complement(3578187..3580205) 1 NC_009438.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xcb:XC_3531 potassium-transporting ATPase B chain; K+-transporting ATPase subunit B 3580205 5079721 Sputcn32_3081 Shewanella putrefaciens CN-32 K+-transporting ATPase subunit B YP_001184593.1 3578187 R 319224 CDS YP_001184594.1 146294170 5079722 complement(3580208..3581932) 1 NC_009438.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3581932 5079722 Sputcn32_3082 Shewanella putrefaciens CN-32 potassium-transporting ATPase subunit A YP_001184594.1 3580208 R 319224 CDS YP_001184595.1 146294171 5079723 complement(3582590..3583660) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO3757 rubisco operon transcriptional regulator; LysR family transcriptional regulator 3583660 5079723 Sputcn32_3083 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184595.1 3582590 R 319224 CDS YP_001184596.1 146294172 5079724 3583724..3584683 1 NC_009438.1 PFAM: protein of unknown function DUF897; KEGG: she:Shewmr4_3107 protein of unknown function DUF897; hypothetical protein 3584683 5079724 Sputcn32_3084 Shewanella putrefaciens CN-32 hypothetical protein YP_001184596.1 3583724 D 319224 CDS YP_001184597.1 146294173 5079725 complement(3584766..3585737) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: shm:Shewmr7_0864 diguanylate cyclase with GAF sensor; diguanylate cyclase 3585737 5079725 Sputcn32_3085 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001184597.1 3584766 R 319224 CDS YP_001184598.1 146294174 5079726 complement(3585814..3588678) 1 NC_009438.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3588678 5079726 Sputcn32_3086 Shewanella putrefaciens CN-32 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_001184598.1 3585814 R 319224 CDS YP_001184599.1 146294175 5079727 3588904..3589887 1 NC_009438.1 KEGG: she:Shewmr4_3110 hypothetical protein; hypothetical protein 3589887 5079727 Sputcn32_3087 Shewanella putrefaciens CN-32 hypothetical protein YP_001184599.1 3588904 D 319224 CDS YP_001184600.1 146294176 5079728 3589901..3590800 1 NC_009438.1 KEGG: shm:Shewmr7_0861 protein of unknown function DUF350; hypothetical protein 3590800 5079728 Sputcn32_3088 Shewanella putrefaciens CN-32 hypothetical protein YP_001184600.1 3589901 D 319224 CDS YP_001184601.1 146294177 5079729 3590805..3592529 1 NC_009438.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3592529 5079729 Sputcn32_3089 Shewanella putrefaciens CN-32 spermidine synthase YP_001184601.1 3590805 D 319224 CDS YP_001184602.1 146294178 5079730 3592608..3593021 1 NC_009438.1 KEGG: shm:Shewmr7_0859 hypothetical protein; hypothetical protein 3593021 5079730 Sputcn32_3090 Shewanella putrefaciens CN-32 hypothetical protein YP_001184602.1 3592608 D 319224 CDS YP_001184603.1 146294179 5079731 3593033..3593722 1 NC_009438.1 PFAM: PspA/IM30 family protein; KEGG: son:SO3765 hypothetical protein; phage shock protein A, PspA 3593722 5079731 Sputcn32_3091 Shewanella putrefaciens CN-32 phage shock protein A, PspA YP_001184603.1 3593033 D 319224 CDS YP_001184604.1 146294180 5079732 3593881..3594534 1 NC_009438.1 KEGG: son:SO3766 hypothetical protein; hypothetical protein 3594534 5079732 Sputcn32_3092 Shewanella putrefaciens CN-32 hypothetical protein YP_001184604.1 3593881 D 319224 CDS YP_001184605.1 146294181 5079733 3594656..3594985 1 NC_009438.1 KEGG: shm:Shewmr7_0856 hypothetical protein; hypothetical protein 3594985 5079733 Sputcn32_3093 Shewanella putrefaciens CN-32 hypothetical protein YP_001184605.1 3594656 D 319224 CDS YP_001184606.1 146294182 5079734 3595128..3595949 1 NC_009438.1 PFAM: Ion transport protein; Ion transport 2 domain protein,; KEGG: son:SO3768 ion transporter; Ion transport 2 domain-containing protein 3595949 5079734 Sputcn32_3094 Shewanella putrefaciens CN-32 Ion transport 2 domain-containing protein YP_001184606.1 3595128 D 319224 CDS YP_001184607.1 146294183 5079735 complement(3596025..3597551) 1 NC_009438.1 PFAM: adenylate cyclase; KEGG: she:Shewmr4_3118 adenylate cyclase; adenylate cyclase 3597551 5079735 Sputcn32_3095 Shewanella putrefaciens CN-32 adenylate cyclase YP_001184607.1 3596025 R 319224 CDS YP_001184608.1 146294184 5079736 3597769..3598449 1 NC_009438.1 PFAM: protein of unknown function DUF47; KEGG: shm:Shewmr7_0853 protein of unknown function DUF47; hypothetical protein 3598449 5079736 Sputcn32_3096 Shewanella putrefaciens CN-32 hypothetical protein YP_001184608.1 3597769 D 319224 CDS YP_001184609.1 146294185 5079737 3598475..3599764 1 NC_009438.1 PFAM: phosphate transporter; KEGG: she:Shewmr4_3120 phosphate transporter; phosphate transporter 3599764 5079737 Sputcn32_3097 Shewanella putrefaciens CN-32 phosphate transporter YP_001184609.1 3598475 D 319224 CDS YP_001184610.1 146294186 5079738 3599961..3600509 1 NC_009438.1 PFAM: SH3, type 3 domain protein; SMART: SH3 domain protein domain protein; KEGG: shm:Shewmr7_0851 SH3 domain protein domain protein; SH3 type 3 domain-containing protein 3600509 5079738 Sputcn32_3098 Shewanella putrefaciens CN-32 SH3 type 3 domain-containing protein YP_001184610.1 3599961 D 319224 CDS YP_001184611.1 146294187 5079739 3600757..3603951 1 NC_009438.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3603951 5079739 Sputcn32_3099 Shewanella putrefaciens CN-32 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_001184611.1 3600757 D 319224 CDS YP_001184612.1 146294188 5079740 3604909..3605406 1 NC_009438.1 hypothetical protein 3605406 5079740 Sputcn32_3100 Shewanella putrefaciens CN-32 hypothetical protein YP_001184612.1 3604909 D 319224 CDS YP_001184613.1 146294189 5079741 3605443..3605793 1 NC_009438.1 hypothetical protein 3605793 5079741 Sputcn32_3101 Shewanella putrefaciens CN-32 hypothetical protein YP_001184613.1 3605443 D 319224 CDS YP_001184614.1 146294190 5079742 3606596..3607330 1 NC_009438.1 PFAM: protein of unknown function DUF599; KEGG: son:SO3776 hypothetical protein; hypothetical protein 3607330 5079742 Sputcn32_3102 Shewanella putrefaciens CN-32 hypothetical protein YP_001184614.1 3606596 D 319224 CDS YP_001184615.1 146294191 5079743 3607428..3607604 1 NC_009438.1 KEGG: son:SO3777 hypothetical protein; hypothetical protein 3607604 5079743 Sputcn32_3103 Shewanella putrefaciens CN-32 hypothetical protein YP_001184615.1 3607428 D 319224 CDS YP_001184616.1 146294192 5079744 complement(3607714..3608307) 1 NC_009438.1 TIGRFAM: putative adenylyl cyclase CyaB; PFAM: adenylate cyclase; KEGG: son:SO3778 adenylate cyclase CyaB, putative; putative adenylyl cyclase CyaB 3608307 5079744 Sputcn32_3104 Shewanella putrefaciens CN-32 putative adenylyl cyclase CyaB YP_001184616.1 3607714 R 319224 CDS YP_001184617.1 146294193 5079745 complement(3608355..3610106) 1 NC_009438.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 3610106 5079745 Sputcn32_3105 Shewanella putrefaciens CN-32 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001184617.1 3608355 R 319224 CDS YP_001184618.1 146294194 5079746 complement(3610103..3612034) 1 NC_009438.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 3612034 5079746 Sputcn32_3106 Shewanella putrefaciens CN-32 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_001184618.1 3610103 R 319224 CDS YP_001184619.1 146294195 5079747 complement(3612229..3613269) 1 NC_009438.1 KEGG: shm:Shewmr7_0839 hypothetical protein; hypothetical protein 3613269 5079747 Sputcn32_3107 Shewanella putrefaciens CN-32 hypothetical protein YP_001184619.1 3612229 R 319224 CDS YP_001184620.1 146294196 5079748 3613703..3615355 1 NC_009438.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: son:SO3783 ATP-dependent RNA helicase, DEAD box family; DEAD/DEAH box helicase 3615355 5079748 Sputcn32_3108 Shewanella putrefaciens CN-32 DEAD/DEAH box helicase YP_001184620.1 3613703 D 319224 CDS YP_001184621.1 146294197 5079749 complement(3615458..3617026) 1 NC_009438.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; KEGG: pen:PSEEN3931 aerotaxis receptor; methyl-accepting chemotaxis sensory transducer 3617026 5079749 Sputcn32_3109 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184621.1 3615458 R 319224 CDS YP_001184622.1 146294198 5079750 complement(3617304..3618680) 1 NC_009438.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 3618680 5079750 Sputcn32_3110 Shewanella putrefaciens CN-32 ATP-dependent RNA helicase DbpA YP_001184622.1 3617304 R 319224 CDS YP_001184623.1 146294199 5079751 complement(3619008..3619895) 1 NC_009438.1 PFAM: Pirin domain protein domain protein; Pirin domain protein; KEGG: she:Shewmr4_0744 pirin domain protein domain protein; pirin domain-containing protein 3619895 5079751 Sputcn32_3111 Shewanella putrefaciens CN-32 pirin domain-containing protein YP_001184623.1 3619008 R 319224 CDS YP_001184624.1 146294200 5079752 complement(3620600..3621130) 1 NC_009438.1 KEGG: son:SO2169.1 hypothetical protein; hypothetical protein 3621130 5079752 Sputcn32_3112 Shewanella putrefaciens CN-32 hypothetical protein YP_001184624.1 3620600 R 319224 CDS YP_001184625.1 146294201 5079753 complement(3621456..3622079) 1 NC_009438.1 KEGG: she:Shewmr4_2555 protein of unknown function DUF1568; hypothetical protein 3622079 5079753 Sputcn32_3113 Shewanella putrefaciens CN-32 hypothetical protein YP_001184625.1 3621456 R 319224 CDS YP_001184626.1 146294202 5078459 complement(3622576..3623037) 1 NC_009438.1 hypothetical protein 3623037 5078459 Sputcn32_3115 Shewanella putrefaciens CN-32 hypothetical protein YP_001184626.1 3622576 R 319224 CDS YP_001184627.1 146294203 5078460 complement(3623552..3623755) 1 NC_009438.1 KEGG: sdn:Sden_3177 hypothetical protein; hypothetical protein 3623755 5078460 Sputcn32_3116 Shewanella putrefaciens CN-32 hypothetical protein YP_001184627.1 3623552 R 319224 CDS YP_001184628.1 146294204 5078461 3624008..3625918 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0885 ABC transporter, ATP-binding protein; ABC transporter-like protein 3625918 5078461 Sputcn32_3117 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184628.1 3624008 D 319224 CDS YP_001184629.1 146294205 5078462 3625930..3626424 1 NC_009438.1 KEGG: shm:Shewmr7_3282 hypothetical protein; hypothetical protein 3626424 5078462 Sputcn32_3118 Shewanella putrefaciens CN-32 hypothetical protein YP_001184629.1 3625930 D 319224 CDS YP_001184630.1 146294206 5078463 complement(3626462..3626872) 1 NC_009438.1 PFAM: glutathione-dependent formaldehyde-activating, GFA; KEGG: son:SO0883 hypothetical protein; glutathione-dependent formaldehyde-activating protein 3626872 5078463 Sputcn32_3119 Shewanella putrefaciens CN-32 glutathione-dependent formaldehyde-activating protein YP_001184630.1 3626462 R 319224 CDS YP_001184631.1 146294207 5078464 complement(3626874..3628541) 1 NC_009438.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: son:SO0882 oxidoreductase, GMC family; glucose-methanol-choline oxidoreductase 3628541 5078464 Sputcn32_3120 Shewanella putrefaciens CN-32 glucose-methanol-choline oxidoreductase YP_001184631.1 3626874 R 319224 CDS YP_001184632.1 146294208 5078465 complement(3628553..3629059) 1 NC_009438.1 KEGG: son:SO0881 hypothetical protein; hypothetical protein 3629059 5078465 Sputcn32_3121 Shewanella putrefaciens CN-32 hypothetical protein YP_001184632.1 3628553 R 319224 CDS YP_001184633.1 146294209 5078466 3629169..3630197 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; KEGG: son:SO0880 hypothetical protein; alpha/beta hydrolase fold domain-containing protein 3630197 5078466 Sputcn32_3122 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001184633.1 3629169 D 319224 CDS YP_001184634.1 146294210 5078467 3630181..3630426 1 NC_009438.1 KEGG: shm:Shewmr7_3287 protein of unknown function UPF0270; hypothetical protein 3630426 5078467 Sputcn32_3123 Shewanella putrefaciens CN-32 hypothetical protein YP_001184634.1 3630181 D 319224 CDS YP_001184635.1 146294211 5078468 3630517..3631404 1 NC_009438.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: shm:Shewmr7_3288 phosphoribulokinase; phosphoribulokinase 3631404 5078468 Sputcn32_3124 Shewanella putrefaciens CN-32 phosphoribulokinase YP_001184635.1 3630517 D 319224 CDS YP_001184636.1 146294212 5078469 complement(3631931..3632473) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: son:SO0877 acetyltransferase, GNAT family; N-acetyltransferase GCN5 3632473 5078469 Sputcn32_3125 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184636.1 3631931 R 319224 CDS YP_001184637.1 146294213 5078470 complement(3632609..3633901) 1 NC_009438.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 3633901 5078470 Sputcn32_3126 Shewanella putrefaciens CN-32 aminopeptidase B YP_001184637.1 3632609 R 319224 CDS YP_001184638.1 146294214 5078471 3634089..3634793 1 NC_009438.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 3634793 5078471 Sputcn32_3127 Shewanella putrefaciens CN-32 sugar fermentation stimulation protein A YP_001184638.1 3634089 D 319224 CDS YP_001184639.1 146294215 5078472 3634957..3635400 1 NC_009438.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger, DksA/TraR C4-type; KEGG: shm:Shewmr7_3292 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 3635400 5078472 Sputcn32_3128 Shewanella putrefaciens CN-32 TraR/DksA family transcriptional regulator YP_001184639.1 3634957 D 319224 CDS YP_001184640.1 146294216 5078473 3635577..3636476 1 NC_009438.1 PFAM: glutamyl-tRNA synthetase, class Ic; KEGG: shm:Shewmr7_3293 glutamyl-tRNA synthetase, class Ic; glutamate--tRNA ligase 3636476 5078473 Sputcn32_3129 Shewanella putrefaciens CN-32 glutamate--tRNA ligase YP_001184640.1 3635577 D 319224 CDS YP_001184641.1 146294217 5078474 3636592..3638076 1 NC_009438.1 TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; KEGG: she:Shewmr4_0728 poly(A) polymerase; poly(A) polymerase 3638076 5078474 Sputcn32_3130 Shewanella putrefaciens CN-32 poly(A) polymerase YP_001184641.1 3636592 D 319224 CDS YP_001184642.1 146294218 5078475 3638076..3638558 1 NC_009438.1 KEGG: son:SO0871 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3638558 5078475 Sputcn32_3131 Shewanella putrefaciens CN-32 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_001184642.1 3638076 D 319224 CDS YP_001184643.1 146294219 5078476 3638622..3639416 1 NC_009438.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3639416 panB 5078476 panB Shewanella putrefaciens CN-32 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_001184643.1 3638622 D 319224 CDS YP_001184644.1 146294220 5078477 3639470..3640315 1 NC_009438.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3640315 panC 5078477 panC Shewanella putrefaciens CN-32 pantoate--beta-alanine ligase YP_001184644.1 3639470 D 319224 CDS YP_001184645.1 146294221 5078478 3640527..3641054 1 NC_009438.1 KEGG: she:Shewmr4_0724 hypothetical protein; hypothetical protein 3641054 5078478 Sputcn32_3134 Shewanella putrefaciens CN-32 hypothetical protein YP_001184645.1 3640527 D 319224 CDS YP_001184646.1 146294222 5078479 3641377..3641796 1 NC_009438.1 PFAM: Curlin associated repeat protein; KEGG: son:SO0866 minor curlin subunit CsgB, putative; curlin-associated protein 3641796 5078479 Sputcn32_3135 Shewanella putrefaciens CN-32 curlin-associated protein YP_001184646.1 3641377 D 319224 CDS YP_001184647.1 146294223 5078480 3641811..3643301 1 NC_009438.1 PFAM: Curlin associated repeat protein; KEGG: she:Shewmr4_0721 curlin associated repeat protein; curlin-associated protein 3643301 5078480 Sputcn32_3136 Shewanella putrefaciens CN-32 curlin-associated protein YP_001184647.1 3641811 D 319224 CDS YP_001184648.1 146294224 5078481 complement(3643470..3644099) 1 NC_009438.1 PFAM: regulatory protein, LuxR; KEGG: she:Shewmr4_0720 transcriptional regulator, LuxR family; response regulator receiver protein 3644099 5078481 Sputcn32_3137 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001184648.1 3643470 R 319224 CDS YP_001184649.1 146294225 5078482 complement(3644529..3645137) 1 NC_009438.1 KEGG: she:Shewmr4_0719 hypothetical protein; hypothetical protein 3645137 5078482 Sputcn32_3138 Shewanella putrefaciens CN-32 hypothetical protein YP_001184649.1 3644529 R 319224 CDS YP_001184650.1 146294226 5078483 3645292..3646521 1 NC_009438.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 3646521 5078483 Sputcn32_3139 Shewanella putrefaciens CN-32 D-3-phosphoglycerate dehydrogenase YP_001184650.1 3645292 D 319224 CDS YP_001184651.1 146294227 5078484 3646672..3647628 1 NC_009438.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: son:SO0861 hypothetical protein; glycine cleavage T protein (aminomethyl transferase) 3647628 5078484 Sputcn32_3140 Shewanella putrefaciens CN-32 glycine cleavage T protein (aminomethyl transferase) YP_001184651.1 3646672 D 319224 CDS YP_001184652.1 146294228 5078485 complement(3647691..3648707) 1 NC_009438.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: shm:Shewmr7_3306 response regulator receiver modulated metal dependent phosphohydrolase; response regulator receiver modulated metal dependent phosphohydrolase 3648707 5078485 Sputcn32_3141 Shewanella putrefaciens CN-32 response regulator receiver modulated metal dependent phosphohydrolase YP_001184652.1 3647691 R 319224 CDS YP_001184653.1 146294229 5078486 complement(3648862..3654177) 1 NC_009438.1 KEGG: shm:Shewmr7_3307 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3654177 5078486 Sputcn32_3142 Shewanella putrefaciens CN-32 multi-sensor hybrid histidine kinase YP_001184653.1 3648862 R 319224 CDS YP_001184654.1 146294230 5078487 complement(3654310..3655668) 1 NC_009438.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: she:Shewmr4_0714 amino acid carrier protein; amino acid carrier protein 3655668 5078487 Sputcn32_3143 Shewanella putrefaciens CN-32 amino acid carrier protein YP_001184654.1 3654310 R 319224 CDS YP_001184655.1 146294231 5078488 3656410..3657081 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3309 ABC transporter related; ABC transporter-like protein 3657081 5078488 Sputcn32_3144 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184655.1 3656410 D 319224 CDS YP_001184656.1 146294232 5078489 3657078..3659714 1 NC_009438.1 PFAM: protein of unknown function DUF214; KEGG: son:SO0856 putative ABC transport system permease protein; hypothetical protein 3659714 5078489 Sputcn32_3145 Shewanella putrefaciens CN-32 hypothetical protein YP_001184656.1 3657078 D 319224 CDS YP_001184657.1 146294233 5078490 3659711..3660922 1 NC_009438.1 KEGG: she:Shewmr4_0711 hypothetical protein; hypothetical protein 3660922 5078490 Sputcn32_3146 Shewanella putrefaciens CN-32 hypothetical protein YP_001184657.1 3659711 D 319224 CDS YP_001184658.1 146294234 5078491 3661245..3661514 1 NC_009438.1 PFAM: NapD family protein; KEGG: son:SO0849 napD protein; NapD family protein 3661514 5078491 Sputcn32_3147 Shewanella putrefaciens CN-32 NapD family protein YP_001184658.1 3661245 D 319224 CDS YP_001184659.1 146294235 5078492 3661511..3663991 1 NC_009438.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 3663991 5078492 Sputcn32_3148 Shewanella putrefaciens CN-32 nitrate reductase catalytic subunit YP_001184659.1 3661511 D 319224 CDS YP_001184660.1 146294236 5078493 3664045..3664779 1 NC_009438.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 3664779 napG 5078493 napG Shewanella putrefaciens CN-32 quinol dehydrogenase periplasmic component YP_001184660.1 3664045 D 319224 CDS YP_001184661.1 146294237 5078494 3664776..3665747 1 NC_009438.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 3665747 napH 5078494 napH Shewanella putrefaciens CN-32 quinol dehydrogenase membrane component YP_001184661.1 3664776 D 319224 CDS YP_001184662.1 146294238 5078495 3665744..3666175 1 NC_009438.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: shm:Shewmr7_3321 nitrate reductase cytochrome c-type subunit (NapB); nitrate reductase cytochrome c-type subunit 3666175 5078495 Sputcn32_3151 Shewanella putrefaciens CN-32 nitrate reductase cytochrome c-type subunit YP_001184662.1 3665744 D 319224 CDS YP_001184663.1 146294239 5078496 complement(3666374..3666526) 1 NC_009438.1 KEGG: shm:Shewmr7_3322 hypothetical protein; hypothetical protein 3666526 5078496 Sputcn32_3152 Shewanella putrefaciens CN-32 hypothetical protein YP_001184663.1 3666374 R 319224 CDS YP_001184664.1 146294240 5078497 3666620..3667507 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_3323 transcriptional regulator, LysR family; LysR family transcriptional regulator 3667507 5078497 Sputcn32_3153 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184664.1 3666620 D 319224 CDS YP_001184665.1 146294241 5078498 complement(3667622..3669715) 1 NC_009438.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3669715 5078498 Sputcn32_3154 Shewanella putrefaciens CN-32 elongation factor G YP_001184665.1 3667622 R 319224 CDS YP_001184666.1 146294242 5078499 complement(3670282..3674835) 1 NC_009438.1 PFAM: biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthase L chain, ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; KEGG: son:SO0840 acetyl-CoA carboxylase multifunctional enzyme accADC, carboxyl transferase subunit alpha/carboxyl transferase subunit beta/biotin carboxylase; carbamoyl-phosphate synthase subunit L 3674835 5078499 Sputcn32_3155 Shewanella putrefaciens CN-32 carbamoyl-phosphate synthase subunit L YP_001184666.1 3670282 R 319224 CDS YP_001184667.1 146294243 5078500 3674957..3675868 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: she:Shewmr4_0695 transcriptional regulator, LysR family; LysR family transcriptional regulator 3675868 5078500 Sputcn32_3156 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184667.1 3674957 D 319224 CDS YP_001184668.1 146294244 5078501 complement(3675949..3676761) 1 NC_009438.1 PFAM: penicillin-binding protein, transpeptidase; KEGG: son:SO0837 beta-lactamase, putative; beta-lactamase 3676761 5078501 Sputcn32_3157 Shewanella putrefaciens CN-32 beta-lactamase YP_001184668.1 3675949 R 319224 CDS YP_001184669.1 146294245 5078502 3677121..3678275 1 NC_009438.1 KEGG: she:Shewmr4_0693 hypothetical protein; hypothetical protein 3678275 5078502 Sputcn32_3158 Shewanella putrefaciens CN-32 hypothetical protein YP_001184669.1 3677121 D 319224 CDS YP_001184670.1 146294246 5078503 3678457..3679116 1 NC_009438.1 PFAM: protein of unknown function DUF335, SprT; SMART: protein of unknown function SprT; KEGG: son:SO0834 sprT protein, putative; hypothetical protein 3679116 5078503 Sputcn32_3159 Shewanella putrefaciens CN-32 hypothetical protein YP_001184670.1 3678457 D 319224 CDS YP_001184671.1 146294247 5078504 3679254..3680033 1 NC_009438.1 PFAM: Endonuclease I; KEGG: she:Shewmr4_0691 deoxyribonuclease I; deoxyribonuclease I 3680033 5078504 Sputcn32_3160 Shewanella putrefaciens CN-32 deoxyribonuclease I YP_001184671.1 3679254 D 319224 CDS YP_001184672.1 146294248 5078505 3680042..3680773 1 NC_009438.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3680773 5078505 Sputcn32_3161 Shewanella putrefaciens CN-32 16S ribosomal RNA methyltransferase RsmE YP_001184672.1 3680042 D 319224 CDS YP_001184673.1 146294249 5078506 3680838..3681791 1 NC_009438.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 3681791 5078506 Sputcn32_3162 Shewanella putrefaciens CN-32 glutathione synthetase YP_001184673.1 3680838 D 319224 CDS YP_001184674.1 146294250 5078507 3681878..3683200 1 NC_009438.1 PFAM: Alkaline phosphatase; KEGG: shm:Shewmr7_3334 alkaline phosphatase; alkaline phosphatase 3683200 5078507 Sputcn32_3163 Shewanella putrefaciens CN-32 alkaline phosphatase YP_001184674.1 3681878 D 319224 CDS YP_001184675.1 146294251 5078508 3683352..3684395 1 NC_009438.1 PFAM: methyltransferase small; Methyltransferase small, N-terminal domain protein; KEGG: she:Shewmr4_0687 rRNA (guanine-N(2)-)-methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 3684395 5078508 Sputcn32_3164 Shewanella putrefaciens CN-32 rRNA (guanine-N(2)-)-methyltransferase YP_001184675.1 3683352 D 319224 CDS YP_001184676.1 146294252 5080108 3684823..3686511 1 NC_009438.1 PFAM: protein of unknown function DUF342; KEGG: she:Shewmr4_3273 protein of unknown function DUF342; hypothetical protein 3686511 5080108 Sputcn32_3165 Shewanella putrefaciens CN-32 hypothetical protein YP_001184676.1 3684823 D 319224 CDS YP_001184677.1 146294253 5080109 3686680..3687057 1 NC_009438.1 KEGG: she:Shewmr4_3274 hypothetical protein; hypothetical protein 3687057 5080109 Sputcn32_3166 Shewanella putrefaciens CN-32 hypothetical protein YP_001184677.1 3686680 D 319224 CDS YP_001184678.1 146294254 5080110 3687305..3688441 1 NC_009438.1 PFAM: peptidase M50; KEGG: shm:Shewmr7_0672 peptidase M50; peptidase M50 3688441 5080110 Sputcn32_3167 Shewanella putrefaciens CN-32 peptidase M50 YP_001184678.1 3687305 D 319224 CDS YP_001184679.1 146294255 5080111 complement(3688463..3689551) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dvu:DVU0416 GGDEF domain protein; diguanylate cyclase 3689551 5080111 Sputcn32_3168 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001184679.1 3688463 R 319224 CDS YP_001184680.1 146294256 5080112 complement(3689709..3691124) 1 NC_009438.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: son:SO0822 outer membrane efflux family protein; RND efflux system outer membrane lipoprotein 3691124 5080112 Sputcn32_3169 Shewanella putrefaciens CN-32 RND efflux system outer membrane lipoprotein YP_001184680.1 3689709 R 319224 CDS YP_001184681.1 146294257 5080113 complement(3691132..3693075) 1 NC_009438.1 PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: son:SO0821 ABC transporter, ATP-binding/permease protein; ABC transporter-like protein 3693075 5080113 Sputcn32_3170 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184681.1 3691132 R 319224 CDS YP_001184682.1 146294258 5080114 complement(3693078..3694328) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: sugar-specific permease, EIIA 1 domain; secretion protein HlyD family protein; KEGG: son:SO0820 HlyD family secretion protein; RND family efflux transporter MFP subunit 3694328 5080114 Sputcn32_3171 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184682.1 3693078 R 319224 CDS YP_001184683.1 146294259 5080115 complement(3694683..3696953) 1 NC_009438.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3696953 5080115 Sputcn32_3172 Shewanella putrefaciens CN-32 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_001184683.1 3694683 R 319224 CDS YP_001184684.1 146294260 5080116 3697154..3698059 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_0653 transcriptional regulator, LysR family; LysR family transcriptional regulator 3698059 5080116 Sputcn32_3173 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184684.1 3697154 D 319224 CDS YP_001184685.1 146294261 5080117 complement(3698135..3698863) 1 NC_009438.1 PFAM: HDOD; KEGG: shm:Shewmr7_0652 putative signal transduction protein; putative signal transduction protein 3698863 5080117 Sputcn32_3174 Shewanella putrefaciens CN-32 putative signal transduction protein YP_001184685.1 3698135 R 319224 CDS YP_001184686.1 146294262 5080118 3699558..3700553 1 NC_009438.1 KEGG: sfr:Sfri_1031 hypothetical protein; hypothetical protein 3700553 5080118 Sputcn32_3175 Shewanella putrefaciens CN-32 hypothetical protein YP_001184686.1 3699558 D 319224 CDS YP_001184687.1 146294263 5080119 complement(3700626..3702587) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: shm:Shewmr7_0651 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 3702587 5080119 Sputcn32_3176 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001184687.1 3700626 R 319224 CDS YP_001184688.1 146294264 5080120 complement(3703048..3704490) 1 NC_009438.1 KEGG: son:SO0813 hypothetical protein; hypothetical protein 3704490 5080120 Sputcn32_3177 Shewanella putrefaciens CN-32 hypothetical protein YP_001184688.1 3703048 R 319224 CDS YP_001184689.1 146294265 5080121 3704694..3705650 1 NC_009438.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; ribonucleoside hydrolase 1 3705650 rihA 5080121 rihA Shewanella putrefaciens CN-32 ribonucleoside hydrolase 1 YP_001184689.1 3704694 D 319224 CDS YP_001184690.1 146294266 5080122 3705670..3706581 1 NC_009438.1 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 3706581 5080122 Sputcn32_3179 Shewanella putrefaciens CN-32 ribokinase YP_001184690.1 3705670 D 319224 CDS YP_001184691.1 146294267 5080123 3706752..3707228 1 NC_009438.1 TIGRFAM: Azurin; PFAM: blue (type 1) copper domain protein; KEGG: shm:Shewmr7_0645 blue (type 1) copper domain protein; azurin 3707228 5080123 Sputcn32_3180 Shewanella putrefaciens CN-32 azurin YP_001184691.1 3706752 D 319224 CDS YP_001184692.1 146294268 5080124 complement(3707323..3708513) 1 NC_009438.1 KEGG: sdn:Sden_0953 hypothetical protein; hypothetical protein 3708513 5080124 Sputcn32_3181 Shewanella putrefaciens CN-32 hypothetical protein YP_001184692.1 3707323 R 319224 CDS YP_001184693.1 146294269 5080125 complement(3708914..3709216) 1 NC_009438.1 KEGG: she:Shewmr4_3309 hypothetical protein; hypothetical protein 3709216 5080125 Sputcn32_3182 Shewanella putrefaciens CN-32 hypothetical protein YP_001184693.1 3708914 R 319224 CDS YP_001184694.1 146294270 5080126 complement(3709545..3710111) 1 NC_009438.1 KEGG: shm:Shewmr7_0642 hypoxanthine-guanine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase 3710111 5080126 Sputcn32_3183 Shewanella putrefaciens CN-32 hypoxanthine-guanine phosphoribosyltransferase YP_001184694.1 3709545 R 319224 CDS YP_001184695.1 146294271 5080127 complement(3710399..3712162) 1 NC_009438.1 PFAM: Alkaline phosphatase; KEGG: she:Shewmr4_3312 twin-arginine translocation pathway signal; alkaline phosphatase 3712162 5080127 Sputcn32_3184 Shewanella putrefaciens CN-32 alkaline phosphatase YP_001184695.1 3710399 R 319224 CDS YP_001184696.1 146294272 5080128 3712433..3712861 1 NC_009438.1 PFAM: CBS domain containing protein; KEGG: shm:Shewmr7_0640 CBS domain containing membrane protein; hypothetical protein 3712861 5080128 Sputcn32_3185 Shewanella putrefaciens CN-32 hypothetical protein YP_001184696.1 3712433 D 319224 CDS YP_001184697.1 146294273 5080129 3712961..3713566 1 NC_009438.1 KEGG: son:SO0804 hypothetical protein; hypothetical protein 3713566 5080129 Sputcn32_3186 Shewanella putrefaciens CN-32 hypothetical protein YP_001184697.1 3712961 D 319224 CDS YP_001184698.1 146294274 5080130 complement(3713594..3715054) 1 NC_009438.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: shm:Shewmr7_0638 MATE efflux family protein; MATE efflux family protein 3715054 5080130 Sputcn32_3187 Shewanella putrefaciens CN-32 MATE efflux family protein YP_001184698.1 3713594 R 319224 CDS YP_001184699.1 146294275 5080131 3715340..3716257 1 NC_009438.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: shm:Shewmr7_0637 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase domain-containing protein 3716257 5080131 Sputcn32_3188 Shewanella putrefaciens CN-32 alpha/beta hydrolase domain-containing protein YP_001184699.1 3715340 D 319224 CDS YP_001184700.1 146294276 5080132 complement(3716357..3717136) 1 NC_009438.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3717136 5080132 Sputcn32_3189 Shewanella putrefaciens CN-32 prolipoprotein diacylglyceryl transferase YP_001184700.1 3716357 R 319224 CDS YP_001184701.1 146294277 5080133 complement(3717299..3717781) 1 NC_009438.1 PFAM: protein of unknown function DUF985; KEGG: shm:Shewmr7_0636 protein of unknown function DUF985; hypothetical protein 3717781 5080133 Sputcn32_3190 Shewanella putrefaciens CN-32 hypothetical protein YP_001184701.1 3717299 R 319224 CDS YP_001184702.1 146294278 5080134 3717934..3720096 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_3318 TonB-dependent receptor; TonB-dependent receptor 3720096 5080134 Sputcn32_3191 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001184702.1 3717934 D 319224 CDS YP_001184703.1 146294279 5080135 3720096..3720557 1 NC_009438.1 KEGG: she:Shewmr4_3319 hypothetical protein; hypothetical protein 3720557 5080135 Sputcn32_3192 Shewanella putrefaciens CN-32 hypothetical protein YP_001184703.1 3720096 D 319224 CDS YP_001184704.1 146294280 5080136 complement(3720639..3722744) 1 NC_009438.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: eba:ebA609 putative cation transport ATPase; heavy metal translocating P-type ATPase 3722744 5080136 Sputcn32_3193 Shewanella putrefaciens CN-32 heavy metal translocating P-type ATPase YP_001184704.1 3720639 R 319224 CDS YP_001184705.1 146294281 5080137 complement(3722731..3723069) 1 NC_009438.1 KEGG: rpa:RPA2334 hypothetical protein; hypothetical protein 3723069 5080137 Sputcn32_3194 Shewanella putrefaciens CN-32 hypothetical protein YP_001184705.1 3722731 R 319224 CDS YP_001184706.1 146294282 5080138 complement(3723087..3723365) 1 NC_009438.1 KEGG: rpa:RPA2335 hypothetical protein; hypothetical protein 3723365 5080138 Sputcn32_3195 Shewanella putrefaciens CN-32 hypothetical protein YP_001184706.1 3723087 R 319224 CDS YP_001184707.1 146294283 5080139 complement(3723346..3723594) 1 NC_009438.1 hypothetical protein 3723594 5080139 Sputcn32_3196 Shewanella putrefaciens CN-32 hypothetical protein YP_001184707.1 3723346 R 319224 CDS YP_001184708.1 146294284 5080140 complement(3723631..3723975) 1 NC_009438.1 KEGG: eba:ebB16 hypothetical protein; hypothetical protein 3723975 5080140 Sputcn32_3197 Shewanella putrefaciens CN-32 hypothetical protein YP_001184708.1 3723631 R 319224 CDS YP_001184709.1 146294285 5080141 complement(3723996..3724565) 1 NC_009438.1 KEGG: eba:ebA616 hypothetical protein; hypothetical protein 3724565 5080141 Sputcn32_3198 Shewanella putrefaciens CN-32 hypothetical protein YP_001184709.1 3723996 R 319224 CDS YP_001184710.1 146294286 5080142 complement(3724683..3726869) 1 NC_009438.1 TIGRFAM: uncharacterized domain; PFAM: OsmC family protein; protein of unknown function DUF181; KEGG: shm:Shewmr7_0632 uncharacterized domain; hypothetical protein 3726869 5080142 Sputcn32_3199 Shewanella putrefaciens CN-32 hypothetical protein YP_001184710.1 3724683 R 319224 CDS YP_001184711.1 146294287 5080143 3727162..3728826 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; Cache, type 2 domain protein; KEGG: shm:Shewmr7_3199 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 3728826 5080143 Sputcn32_3200 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184711.1 3727162 D 319224 CDS YP_001184712.1 146294288 5080144 3729026..3729205 1 NC_009438.1 KEGG: cps:CPS_2516 hypothetical protein; hypothetical protein 3729205 5080144 Sputcn32_3201 Shewanella putrefaciens CN-32 hypothetical protein YP_001184712.1 3729026 D 319224 CDS YP_001184713.1 146294289 5080145 complement(3729236..3729637) 1 NC_009438.1 KEGG: son:SO0792 hypothetical protein; hypothetical protein 3729637 5080145 Sputcn32_3202 Shewanella putrefaciens CN-32 hypothetical protein YP_001184713.1 3729236 R 319224 CDS YP_001184714.1 146294290 5080146 3729902..3730147 1 NC_009438.1 KEGG: son:SO0788 hypothetical protein; hypothetical protein 3730147 5080146 Sputcn32_3203 Shewanella putrefaciens CN-32 hypothetical protein YP_001184714.1 3729902 D 319224 CDS YP_001184715.1 146294291 5080147 3730540..3731070 1 NC_009438.1 KEGG: pen:PSEEN2314 hypothetical protein; hypothetical protein 3731070 5080147 Sputcn32_3204 Shewanella putrefaciens CN-32 hypothetical protein YP_001184715.1 3730540 D 319224 CDS YP_001184716.1 146294292 5080148 3731541..3731945 1 NC_009438.1 KEGG: son:SO0784 hypothetical protein; hypothetical protein 3731945 5080148 Sputcn32_3205 Shewanella putrefaciens CN-32 hypothetical protein YP_001184716.1 3731541 D 319224 CDS YP_001184717.1 146294293 5080149 3732023..3733354 1 NC_009438.1 KEGG: mbu:Mbur_1645 ATPase; ATPase 3733354 5080149 Sputcn32_3206 Shewanella putrefaciens CN-32 ATPase YP_001184717.1 3732023 D 319224 CDS YP_001184718.1 146294294 5080150 3733338..3734168 1 NC_009438.1 KEGG: syf:Synpcc7942_0180 hypothetical protein; hypothetical protein 3734168 5080150 Sputcn32_3207 Shewanella putrefaciens CN-32 hypothetical protein YP_001184718.1 3733338 D 319224 CDS YP_001184719.1 146294295 5080151 3734528..3734956 1 NC_009438.1 hypothetical protein 3734956 5080151 Sputcn32_3208 Shewanella putrefaciens CN-32 hypothetical protein YP_001184719.1 3734528 D 319224 CDS YP_001184720.1 146294296 5080152 complement(3735349..3738237) 1 NC_009438.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3738237 5080152 Sputcn32_3209 Shewanella putrefaciens CN-32 glycine dehydrogenase YP_001184720.1 3735349 R 319224 CDS YP_001184721.1 146294297 5080153 complement(3738360..3738749) 1 NC_009438.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3738749 5080153 Sputcn32_3210 Shewanella putrefaciens CN-32 glycine cleavage system protein H YP_001184721.1 3738360 R 319224 CDS YP_001184722.1 146294298 5080154 complement(3738775..3739869) 1 NC_009438.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3739869 gcvT 5080154 gcvT Shewanella putrefaciens CN-32 glycine cleavage system aminomethyltransferase T YP_001184722.1 3738775 R 319224 CDS YP_001184723.1 146294299 5080155 complement(3740124..3741347) 1 NC_009438.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: son:SO0778 oxidoreductase, FAD-binding, UbiH/Coq6 family; UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase 3741347 5080155 Sputcn32_3212 Shewanella putrefaciens CN-32 UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase YP_001184723.1 3740124 R 319224 CDS YP_001184724.1 146294300 5080156 complement(3741390..3742628) 1 NC_009438.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: monooxygenase, FAD-binding; FAD dependent oxidoreductase; KEGG: she:Shewmr4_3333 2-polyprenyl-6-methoxyphenol 4-hydroxylase; 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3742628 5080156 Sputcn32_3213 Shewanella putrefaciens CN-32 2-polyprenyl-6-methoxyphenol 4-hydroxylase YP_001184724.1 3741390 R 319224 CDS YP_001184725.1 146294301 5080157 complement(3742752..3743387) 1 NC_009438.1 TIGRFAM: yecA family protein; PFAM: protein of unknown function UPF0149; KEGG: shm:Shewmr7_0619 YecA family protein; yecA family protein 3743387 5080157 Sputcn32_3214 Shewanella putrefaciens CN-32 yecA family protein YP_001184725.1 3742752 R 319224 CDS YP_001184726.1 146294302 5080158 3743555..3743857 1 NC_009438.1 PFAM: protein of unknown function DUF710; KEGG: son:SO0775 hypothetical protein; hypothetical protein 3743857 5080158 Sputcn32_3215 Shewanella putrefaciens CN-32 hypothetical protein YP_001184726.1 3743555 D 319224 CDS YP_001184727.1 146294303 5080057 3744163..3744822 1 NC_009438.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: she:Shewmr4_3336 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 3744822 5080057 Sputcn32_3216 Shewanella putrefaciens CN-32 5-formyltetrahydrofolate cyclo-ligase YP_001184727.1 3744163 D 319224 CDS YP_001184728.1 146294304 5080058 complement(3744882..3745601) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: son:SO0772 oxidoreductase, short chain dehydrogenase/reductase family; short chain dehydrogenase 3745601 5080058 Sputcn32_3217 Shewanella putrefaciens CN-32 short chain dehydrogenase YP_001184728.1 3744882 R 319224 CDS YP_001184729.1 146294305 5080059 3745869..3746267 1 NC_009438.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: son:SO0771 hypothetical protein; putative thiol-disulfide oxidoreductase DCC 3746267 5080059 Sputcn32_3218 Shewanella putrefaciens CN-32 putative thiol-disulfide oxidoreductase DCC YP_001184729.1 3745869 D 319224 CDS YP_001184730.1 146294306 5080060 complement(3746359..3747294) 1 NC_009438.1 oxidizes malate to oxaloacetate; malate dehydrogenase 3747294 5080060 Sputcn32_3219 Shewanella putrefaciens CN-32 malate dehydrogenase YP_001184730.1 3746359 R 319224 CDS YP_001184731.1 146294307 5080061 3747578..3748048 1 NC_009438.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor 3748048 5080061 Sputcn32_3220 Shewanella putrefaciens CN-32 arginine repressor YP_001184731.1 3747578 D 319224 CDS YP_001184732.1 146294308 5080062 complement(3748180..3748812) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; KEGG: shm:Shewmr7_0612 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3748812 5080062 Sputcn32_3221 Shewanella putrefaciens CN-32 NAD-dependent epimerase/dehydratase YP_001184732.1 3748180 R 319224 CDS YP_001184733.1 146294309 5080063 3748919..3749827 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_0611 transcriptional regulator, LysR family; LysR family transcriptional regulator 3749827 5080063 Sputcn32_3222 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184733.1 3748919 D 319224 CDS YP_001184734.1 146294310 5080064 complement(3749900..3750835) 1 NC_009438.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: son:SO0740 melanin biosynthesis protein TyrA, putative; Dyp-type peroxidase family protein 3750835 5080064 Sputcn32_3223 Shewanella putrefaciens CN-32 Dyp-type peroxidase family protein YP_001184734.1 3749900 R 319224 CDS YP_001184735.1 146294311 5080065 complement(3751082..3752794) 1 NC_009438.1 KEGG: shm:Shewmr7_0609 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3752794 5080065 Sputcn32_3224 Shewanella putrefaciens CN-32 gamma-glutamyltransferase YP_001184735.1 3751082 R 319224 CDS YP_001184736.1 146294312 5080066 complement(3752970..3754019) 1 NC_009438.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: shm:Shewmr7_0608 ABC transporter related; ABC transporter-like protein 3754019 5080066 Sputcn32_3225 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184736.1 3752970 R 319224 CDS YP_001184737.1 146294313 5080067 complement(3754016..3755650) 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: son:SO0743 iron(III) ABC transporter, permease protein; binding-protein-dependent transport system inner membrane protein 3755650 5080067 Sputcn32_3226 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001184737.1 3754016 R 319224 CDS YP_001184738.1 146294314 5080068 complement(3755728..3756735) 1 NC_009438.1 PFAM: extracellular solute-binding protein, family 1; KEGG: son:SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein; extracellular solute-binding protein 3756735 5080068 Sputcn32_3227 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001184738.1 3755728 R 319224 CDS YP_001184739.1 146294315 5080069 3756951..3757367 1 NC_009438.1 KEGG: shm:Shewmr7_0605 hypothetical protein; hypothetical protein 3757367 5080069 Sputcn32_3228 Shewanella putrefaciens CN-32 hypothetical protein YP_001184739.1 3756951 D 319224 CDS YP_001184740.1 146294316 5080070 complement(3757379..3757975) 1 NC_009438.1 PFAM: Glutathione S-transferase, N-terminal domain; KEGG: shm:Shewmr7_0604 glutathione S-transferase, N-terminal domain protein; glutathione S-transferase domain-containing protein 3757975 5080070 Sputcn32_3229 Shewanella putrefaciens CN-32 glutathione S-transferase domain-containing protein YP_001184740.1 3757379 R 319224 CDS YP_001184741.1 146294317 5080071 complement(3758075..3758824) 1 NC_009438.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: son:SO0747 ferredoxin--NADP reductase; oxidoreductase FAD/NAD(P)-binding subunit 3758824 5080071 Sputcn32_3230 Shewanella putrefaciens CN-32 oxidoreductase FAD/NAD(P)-binding subunit YP_001184741.1 3758075 R 319224 CDS YP_001184742.1 146294318 5080072 complement(3758994..3759599) 1 NC_009438.1 KEGG: son:SO0748 hypothetical protein; hypothetical protein 3759599 5080072 Sputcn32_3231 Shewanella putrefaciens CN-32 hypothetical protein YP_001184742.1 3758994 R 319224 CDS YP_001184743.1 146294319 5080073 3759795..3760400 1 NC_009438.1 PFAM: Phosphoglycerate mutase; KEGG: son:SO0749 hypothetical protein; phosphoglycerate mutase 3760400 5080073 Sputcn32_3232 Shewanella putrefaciens CN-32 phosphoglycerate mutase YP_001184743.1 3759795 D 319224 CDS YP_001184744.1 146294320 5080074 3760412..3761902 1 NC_009438.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: shm:Shewmr7_0600 ferredoxin-dependent glutamate synthase; ferredoxin-dependent glutamate synthase 3761902 5080074 Sputcn32_3233 Shewanella putrefaciens CN-32 ferredoxin-dependent glutamate synthase YP_001184744.1 3760412 D 319224 CDS YP_001184745.1 146294321 5080075 3762052..3762261 1 NC_009438.1 KEGG: son:SO0752 hypothetical protein; hypothetical protein 3762261 5080075 Sputcn32_3234 Shewanella putrefaciens CN-32 hypothetical protein YP_001184745.1 3762052 D 319224 CDS YP_001184746.1 146294322 5080076 complement(3762305..3762562) 1 NC_009438.1 KEGG: shm:Shewmr7_0598 hypothetical protein; hypothetical protein 3762562 5080076 Sputcn32_3235 Shewanella putrefaciens CN-32 hypothetical protein YP_001184746.1 3762305 R 319224 CDS YP_001184747.1 146294323 5080077 complement(3762642..3764438) 1 NC_009438.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0754 ABC transporter, ATP-binding protein; ABC transporter-like protein 3764438 5080077 Sputcn32_3236 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184747.1 3762642 R 319224 CDS YP_001184748.1 146294324 5080078 3764885..3765064 1 NC_009438.1 KEGG: shm:Shewmr7_0596 hypothetical protein; hypothetical protein 3765064 5080078 Sputcn32_3237 Shewanella putrefaciens CN-32 hypothetical protein YP_001184748.1 3764885 D 319224 CDS YP_001184749.1 146294325 5080079 complement(3765112..3766167) 1 NC_009438.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3766167 5080079 Sputcn32_3238 Shewanella putrefaciens CN-32 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001184749.1 3765112 R 319224 CDS YP_001184750.1 146294326 5080080 complement(3766455..3766784) 1 NC_009438.1 KEGG: shm:Shewmr7_0593 hypothetical protein; hypothetical protein 3766784 5080080 Sputcn32_3239 Shewanella putrefaciens CN-32 hypothetical protein YP_001184750.1 3766455 R 319224 CDS YP_001184751.1 146294327 5080081 complement(3766950..3768200) 1 NC_009438.1 PFAM: Rh family protein/ammonium transporter; KEGG: shm:Shewmr7_0592 Rh family protein/ammonium transporter; Rh family protein/ammonium transporter 3768200 5080081 Sputcn32_3240 Shewanella putrefaciens CN-32 Rh family protein/ammonium transporter YP_001184751.1 3766950 R 319224 CDS YP_001184752.1 146294328 5080082 complement(3768211..3768549) 1 NC_009438.1 PFAM: nitrogen regulatory protein P-II; KEGG: son:SO0761 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II 3768549 5080082 Sputcn32_3241 Shewanella putrefaciens CN-32 nitrogen regulatory protein P-II YP_001184752.1 3768211 R 319224 CDS YP_001184753.1 146294329 5080083 3768845..3769387 1 NC_009438.1 PFAM: isochorismatase hydrolase; KEGG: she:Shewmr4_3363 isochorismatase hydrolase; isochorismatase hydrolase 3769387 5080083 Sputcn32_3242 Shewanella putrefaciens CN-32 isochorismatase hydrolase YP_001184753.1 3768845 D 319224 CDS YP_001184754.1 146294330 5080084 3769553..3769804 1 NC_009438.1 KEGG: shm:Shewmr7_0573 hypothetical protein; hypothetical protein 3769804 5080084 Sputcn32_3243 Shewanella putrefaciens CN-32 hypothetical protein YP_001184754.1 3769553 D 319224 CDS YP_001184755.1 146294331 5080085 3769859..3771223 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bbr:BB1960 hypothetical protein; diguanylate cyclase 3771223 5080085 Sputcn32_3244 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001184755.1 3769859 D 319224 CDS YP_001184756.1 146294332 5080086 complement(3771220..3771813) 1 NC_009438.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: shm:Shewmr7_0548 FxsA cytoplasmic membrane protein; FxsA cytoplasmic membrane protein 3771813 5080086 Sputcn32_3245 Shewanella putrefaciens CN-32 FxsA cytoplasmic membrane protein YP_001184756.1 3771220 R 319224 CDS YP_001184757.1 146294333 5080087 3772066..3772389 1 NC_009438.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: shm:Shewmr7_0547 CutA1 divalent ion tolerance protein; CutA1 divalent ion tolerance protein 3772389 5080087 Sputcn32_3246 Shewanella putrefaciens CN-32 CutA1 divalent ion tolerance protein YP_001184757.1 3772066 D 319224 CDS YP_001184758.1 146294334 5080088 3772386..3774200 1 NC_009438.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 3774200 dipZ 5080088 dipZ Shewanella putrefaciens CN-32 thiol:disulfide interchange protein YP_001184758.1 3772386 D 319224 CDS YP_001184759.1 146294335 5080089 3774394..3776037 1 NC_009438.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: son:SO0695 glutathione-regulated potassium-efflux system protein KefC, putative; sodium/hydrogen exchanger 3776037 5080089 Sputcn32_3248 Shewanella putrefaciens CN-32 sodium/hydrogen exchanger YP_001184759.1 3774394 D 319224 CDS YP_001184760.1 146294336 5080090 3776287..3777432 1 NC_009438.1 KEGG: she:Shewmr4_3408 galactokinase; TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; galactokinase 3777432 5080090 Sputcn32_3249 Shewanella putrefaciens CN-32 galactokinase YP_001184760.1 3776287 D 319224 CDS YP_001184761.1 146294337 5080091 3777461..3778495 1 NC_009438.1 PFAM: Aldose 1-epimerase; KEGG: son:SO0693 aldose 1-epimerase; aldose 1-epimerase 3778495 5080091 Sputcn32_3250 Shewanella putrefaciens CN-32 aldose 1-epimerase YP_001184761.1 3777461 D 319224 CDS YP_001184762.1 146294338 5080092 complement(3778612..3779016) 1 NC_009438.1 KEGG: son:SO0691 hypothetical protein; hypothetical protein 3779016 5080092 Sputcn32_3251 Shewanella putrefaciens CN-32 hypothetical protein YP_001184762.1 3778612 R 319224 CDS YP_001184763.1 146294339 5080093 complement(3779355..3780356) 1 NC_009438.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: son:SO0640 alcohol dehydrogenase, zinc-containing; alcohol dehydrogenase 3780356 5080093 Sputcn32_3252 Shewanella putrefaciens CN-32 alcohol dehydrogenase YP_001184763.1 3779355 R 319224 CDS YP_001184764.1 146294340 5080094 complement(3780567..3782420) 1 NC_009438.1 KEGG: son:SO4013 hypothetical protein; hypothetical protein 3782420 5080094 Sputcn32_3253 Shewanella putrefaciens CN-32 hypothetical protein YP_001184764.1 3780567 R 319224 CDS YP_001184765.1 146294341 5080095 complement(3782592..3785690) 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: son:SO4014 AcrB/AcrD/AcrF family protein; acriflavin resistance protein 3785690 5080095 Sputcn32_3254 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001184765.1 3782592 R 319224 CDS YP_001184766.1 146294342 5080096 complement(3785690..3786856) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO4015 hypothetical protein; RND family efflux transporter MFP subunit 3786856 5080096 Sputcn32_3255 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184766.1 3785690 R 319224 CDS YP_001184767.1 146294343 5080097 complement(3787150..3788490) 1 NC_009438.1 PFAM: protein kinase; leucine-rich repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; leucine-rich repeat-containing protein, typical subtype; KEGG: son:SO4016 hypothetical protein; protein kinase 3788490 5080097 Sputcn32_3256 Shewanella putrefaciens CN-32 protein kinase YP_001184767.1 3787150 R 319224 CDS YP_001184768.1 146294344 5080098 3788677..3790092 1 NC_009438.1 PFAM: Peptidoglycan-binding LysM; Lytic transglycosylase, catalytic; MLTD_N domain protein; KEGG: son:SO4017 transglycosylase, Slt family; lytic transglycosylase, catalytic 3790092 5080098 Sputcn32_3257 Shewanella putrefaciens CN-32 lytic transglycosylase, catalytic YP_001184768.1 3788677 D 319224 CDS YP_001184769.1 146294345 5080099 complement(3790175..3791545) 1 NC_009438.1 KEGG: she:Shewmr4_3415 hypothetical protein; hypothetical protein 3791545 5080099 Sputcn32_3258 Shewanella putrefaciens CN-32 hypothetical protein YP_001184769.1 3790175 R 319224 CDS YP_001184770.1 146294346 5080100 3791917..3794619 1 NC_009438.1 KEGG: son:SO4019 hypothetical protein; hypothetical protein 3794619 5080100 Sputcn32_3259 Shewanella putrefaciens CN-32 hypothetical protein YP_001184770.1 3791917 D 319224 CDS YP_001184771.1 146294347 5080101 complement(3794746..3795444) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vfi:VFA0653 IAA acetyltransferase; N-acetyltransferase GCN5 3795444 5080101 Sputcn32_3260 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184771.1 3794746 R 319224 CDS YP_001184772.1 146294348 5080102 complement(3795469..3795891) 1 NC_009438.1 KEGG: son:SO4020 transcriptional regulator, LysR family; LysR family transcriptional regulator 3795891 5080102 Sputcn32_3261 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184772.1 3795469 R 319224 CDS YP_001184773.1 146294349 5080103 complement(3796179..3799025) 1 NC_009438.1 PFAM: peptidase M16 domain protein; KEGG: son:SO4022 peptidase, M16 family; peptidase M16 domain-containing protein 3799025 5080103 Sputcn32_3262 Shewanella putrefaciens CN-32 peptidase M16 domain-containing protein YP_001184773.1 3796179 R 319224 CDS YP_001184774.1 146294350 5080104 complement(3799154..3799996) 1 NC_009438.1 hypothetical protein 3799996 5080104 Sputcn32_3263 Shewanella putrefaciens CN-32 hypothetical protein YP_001184774.1 3799154 R 319224 CDS YP_001184775.1 146294351 5080105 complement(3799984..3801057) 1 NC_009438.1 KEGG: wsu:WS1457 hypothetical protein; hypothetical protein 3801057 5080105 Sputcn32_3264 Shewanella putrefaciens CN-32 hypothetical protein YP_001184775.1 3799984 R 319224 CDS YP_001184776.1 146294352 5080106 complement(3801130..3801867) 1 NC_009438.1 PFAM: protein of unknown function DUF1566; KEGG: pat:Patl_3291 protein of unknown function DUF1566; hypothetical protein 3801867 5080106 Sputcn32_3265 Shewanella putrefaciens CN-32 hypothetical protein YP_001184776.1 3801130 R 319224 CDS YP_001184777.1 146294353 5080107 complement(3802187..3802717) 1 NC_009438.1 PFAM: protein of unknown function DUF1566; KEGG: pat:Patl_3291 protein of unknown function DUF1566; hypothetical protein 3802717 5080107 Sputcn32_3266 Shewanella putrefaciens CN-32 hypothetical protein YP_001184777.1 3802187 R 319224 CDS YP_001184778.1 146294354 5078336 complement(3802851..3806222) 1 NC_009438.1 PFAM: PKD domain containing protein; protein of unknown function DUF1566; KEGG: pat:Patl_3292 protein of unknown function DUF1566; hypothetical protein 3806222 5078336 Sputcn32_3267 Shewanella putrefaciens CN-32 hypothetical protein YP_001184778.1 3802851 R 319224 CDS YP_001184779.1 146294355 5078337 complement(3806225..3807502) 1 NC_009438.1 KEGG: mhu:Mhun_1163 PKD; hypothetical protein 3807502 5078337 Sputcn32_3268 Shewanella putrefaciens CN-32 hypothetical protein YP_001184779.1 3806225 R 319224 CDS YP_001184780.1 146294356 5078338 3807885..3809363 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: cvi:CV0964 hypothetical protein; diguanylate cyclase 3809363 5078338 Sputcn32_3269 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001184780.1 3807885 D 319224 CDS YP_001184781.1 146294357 5078339 complement(3809341..3810975) 1 NC_009438.1 PFAM: helix-turn-helix- domain containing protein, AraC type; response regulator receiver; KEGG: cps:CPS_0756 sensory box sensor histidine kinase/DNA-binding response regulator, AraC family; response regulator receiver protein 3810975 5078339 Sputcn32_3270 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001184781.1 3809341 R 319224 CDS YP_001184782.1 146294358 5078340 complement(3811139..3811675) 1 NC_009438.1 KEGG: she:Shewmr4_3418 hypothetical protein; hypothetical protein 3811675 5078340 Sputcn32_3271 Shewanella putrefaciens CN-32 hypothetical protein YP_001184782.1 3811139 R 319224 CDS YP_001184783.1 146294359 5078341 complement(3811899..3812336) 1 NC_009438.1 PFAM: Stringent starvation protein B; KEGG: shm:Shewmr7_3424 stringent starvation protein B; ClpXP protease specificity-enhancing factor 3812336 5078341 Sputcn32_3272 Shewanella putrefaciens CN-32 ClpXP protease specificity-enhancing factor YP_001184783.1 3811899 R 319224 CDS YP_001184784.1 146294360 5078342 complement(3812336..3812965) 1 NC_009438.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 3812965 sspA 5078342 sspA Shewanella putrefaciens CN-32 stringent starvation protein A YP_001184784.1 3812336 R 319224 CDS YP_001184785.1 146294361 5078343 complement(3813062..3813760) 1 NC_009438.1 PFAM: cytochrome c1; KEGG: shm:Shewmr7_3426 cytochrome c1; cytochrome c1 3813760 5078343 Sputcn32_3274 Shewanella putrefaciens CN-32 cytochrome c1 YP_001184785.1 3813062 R 319224 CDS YP_001184786.1 146294362 5078344 complement(3813760..3814974) 1 NC_009438.1 PFAM: Cytochrome b/b6, N-terminal domain; Cytochrome b/b6, C-terminal domain; KEGG: son:SO0609 ubiquinol-cytochrome c reductase, cytochrome b; cytochrome b/b6 domain-containing protein 3814974 5078344 Sputcn32_3275 Shewanella putrefaciens CN-32 cytochrome b/b6 domain-containing protein YP_001184786.1 3813760 R 319224 CDS YP_001184787.1 146294363 5078345 complement(3814974..3815564) 1 NC_009438.1 KEGG: shm:Shewmr7_3428 ubiquinol-cytochrome c reductase, iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 3815564 5078345 Sputcn32_3276 Shewanella putrefaciens CN-32 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001184787.1 3814974 R 319224 CDS YP_001184788.1 146294364 5078346 complement(3815928..3816821) 1 NC_009438.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: shm:Shewmr7_3429 HflC protein; HflC protein 3816821 5078346 Sputcn32_3277 Shewanella putrefaciens CN-32 HflC protein YP_001184788.1 3815928 R 319224 CDS YP_001184789.1 146294365 5078347 complement(3816825..3817967) 1 NC_009438.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: she:Shewmr4_0600 HflK protein; HflK protein 3817967 5078347 Sputcn32_3278 Shewanella putrefaciens CN-32 HflK protein YP_001184789.1 3816825 R 319224 CDS YP_001184790.1 146294366 5078348 complement(3818004..3819311) 1 NC_009438.1 PFAM: GTP-binding protein, HSR1-related; KEGG: son:SO0604 GTP-binding protein HflX; HSR1-like GTP-binding protein 3819311 5078348 Sputcn32_3279 Shewanella putrefaciens CN-32 HSR1-like GTP-binding protein YP_001184790.1 3818004 R 319224 CDS YP_001184791.1 146294367 5078349 complement(3819335..3819607) 1 NC_009438.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein, core; KEGG: shm:Shewmr7_3432 RNA chaperone Hfq; RNA chaperone Hfq 3819607 5078349 Sputcn32_3280 Shewanella putrefaciens CN-32 RNA chaperone Hfq YP_001184791.1 3819335 R 319224 CDS YP_001184792.1 146294368 5078350 complement(3819698..3820612) 1 NC_009438.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 3820612 miaA 5078350 miaA Shewanella putrefaciens CN-32 tRNA delta(2)-isopentenylpyrophosphate transferase YP_001184792.1 3819698 R 319224 CDS YP_001184793.1 146294369 5078351 complement(3820628..3822553) 1 NC_009438.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3822553 mutL 5078351 mutL Shewanella putrefaciens CN-32 DNA mismatch repair protein YP_001184793.1 3820628 R 319224 CDS YP_001184794.1 146294370 5078352 complement(3822555..3823985) 1 NC_009438.1 PFAM: Peptidoglycan-binding LysM; cell wall hydrolase/autolysin; KEGG: she:Shewmr4_0595 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 3823985 5078352 Sputcn32_3283 Shewanella putrefaciens CN-32 N-acetylmuramoyl-L-alanine amidase YP_001184794.1 3822555 R 319224 CDS YP_001184795.1 146294371 5078353 complement(3823994..3824452) 1 NC_009438.1 PFAM: protein of unknown function UPF0079; KEGG: son:SO0599 conserved hypothetical protein TIGR00150; hypothetical protein 3824452 5078353 Sputcn32_3284 Shewanella putrefaciens CN-32 hypothetical protein YP_001184795.1 3823994 R 319224 CDS YP_001184796.1 146294372 5078354 complement(3824541..3826040) 1 NC_009438.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family N-terminal domain protein; KEGG: she:Shewmr4_0593 carbohydrate kinase, YjeF related protein; carbohydrate kinase 3826040 5078354 Sputcn32_3285 Shewanella putrefaciens CN-32 carbohydrate kinase YP_001184796.1 3824541 R 319224 CDS YP_001184797.1 146294373 5078355 complement(3826334..3826789) 1 NC_009438.1 KEGG: shm:Shewmr7_3438 hypothetical protein; hypothetical protein 3826789 5078355 Sputcn32_3286 Shewanella putrefaciens CN-32 hypothetical protein YP_001184797.1 3826334 R 319224 CDS YP_001184798.1 146294374 5078360 complement(3828585..3829130) 1 NC_009438.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 3829130 5078360 Sputcn32_3287 Shewanella putrefaciens CN-32 oligoribonuclease YP_001184798.1 3828585 R 319224 CDS YP_001184799.1 146294375 5078361 3829243..3830307 1 NC_009438.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 3830307 5078361 Sputcn32_3288 Shewanella putrefaciens CN-32 ribosome-associated GTPase YP_001184799.1 3829243 D 319224 CDS YP_001184800.1 146294376 5078362 3830375..3831244 1 NC_009438.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 3831244 psd 5078362 psd Shewanella putrefaciens CN-32 phosphatidylserine decarboxylase YP_001184800.1 3830375 D 319224 CDS YP_001184801.1 146294377 5078363 3831260..3832144 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; UAA transporter; KEGG: shm:Shewmr7_3442 protein of unknown function DUF6, transmembrane; hypothetical protein 3832144 5078363 Sputcn32_3290 Shewanella putrefaciens CN-32 hypothetical protein YP_001184801.1 3831260 D 319224 CDS YP_001184802.1 146294378 5078364 3832214..3835420 1 NC_009438.1 PFAM: MscS Mechanosensitive ion channel; KEGG: she:Shewmr4_0587 MscS mechanosensitive ion channel; mechanosensitive ion channel protein MscS 3835420 5078364 Sputcn32_3291 Shewanella putrefaciens CN-32 mechanosensitive ion channel protein MscS YP_001184802.1 3832214 D 319224 CDS YP_001184803.1 146294379 5078365 3835435..3836157 1 NC_009438.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: shm:Shewmr7_3444 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 3836157 5078365 Sputcn32_3292 Shewanella putrefaciens CN-32 glycerophosphoryl diester phosphodiesterase YP_001184803.1 3835435 D 319224 CDS YP_001184804.1 146294380 5078366 complement(3836173..3836508) 1 NC_009438.1 KEGG: shm:Shewmr7_3445 hypothetical protein; hypothetical protein 3836508 5078366 Sputcn32_3293 Shewanella putrefaciens CN-32 hypothetical protein YP_001184804.1 3836173 R 319224 CDS YP_001184805.1 146294381 5078367 complement(3836905..3838479) 1 NC_009438.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; KEGG: shm:Shewmr7_3447 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; methyl-accepting chemotaxis sensory transducer 3838479 5078367 Sputcn32_3294 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001184805.1 3836905 R 319224 CDS YP_001184806.1 146294382 5078368 3838730..3838921 1 NC_009438.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: she:Shewmr4_0582 BFD domain protein (2Fe-2S)-binding domain protein; BFD/(2Fe-2S)-binding domain-containing protein 3838921 5078368 Sputcn32_3295 Shewanella putrefaciens CN-32 BFD/(2Fe-2S)-binding domain-containing protein YP_001184806.1 3838730 D 319224 CDS YP_001184807.1 146294383 5078369 complement(3839176..3839832) 1 NC_009438.1 catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; thiopurine S-methyltransferase 3839832 5078369 Sputcn32_3296 Shewanella putrefaciens CN-32 thiopurine S-methyltransferase YP_001184807.1 3839176 R 319224 CDS YP_001184808.1 146294384 5078370 complement(3839936..3840277) 1 NC_009438.1 KEGG: she:Shewmr4_0580 hypothetical protein; hypothetical protein 3840277 5078370 Sputcn32_3297 Shewanella putrefaciens CN-32 hypothetical protein YP_001184808.1 3839936 R 319224 CDS YP_001184809.1 146294385 5078371 3840526..3842334 1 NC_009438.1 PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: shm:Shewmr7_3451 serine/threonine protein kinase; protein kinase 3842334 5078371 Sputcn32_3298 Shewanella putrefaciens CN-32 protein kinase YP_001184809.1 3840526 D 319224 CDS YP_001184810.1 146294386 5078372 complement(3842363..3844765) 1 NC_009438.1 KEGG: son:SO0578 hypothetical protein; hypothetical protein 3844765 5078372 Sputcn32_3299 Shewanella putrefaciens CN-32 hypothetical protein YP_001184810.1 3842363 R 319224 CDS YP_001184811.1 146294387 5078373 complement(3844834..3848538) 1 NC_009438.1 KEGG: she:Shewmr4_0577 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; Cache domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; multi-sensor hybrid histidine kinase 3848538 5078373 Sputcn32_3300 Shewanella putrefaciens CN-32 multi-sensor hybrid histidine kinase YP_001184811.1 3844834 R 319224 CDS YP_001184812.1 146294388 5078374 complement(3848750..3850144) 1 NC_009438.1 PFAM: PhoH family protein; SMART: AAA ATPase; Nucleotide binding protein, PINc; KEGG: shm:Shewmr7_3454 PhoH family protein; PhoH family protein 3850144 5078374 Sputcn32_3301 Shewanella putrefaciens CN-32 PhoH family protein YP_001184812.1 3848750 R 319224 CDS YP_001184813.1 146294389 5078375 3850547..3853453 1 NC_009438.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 3853453 5078375 Sputcn32_3302 Shewanella putrefaciens CN-32 ATP-dependent helicase HepA YP_001184813.1 3850547 D 319224 CDS YP_001184814.1 146294390 5078376 3853623..3854507 1 NC_009438.1 KEGG: son:SO0573 hypothetical protein; hypothetical protein 3854507 5078376 Sputcn32_3303 Shewanella putrefaciens CN-32 hypothetical protein YP_001184814.1 3853623 D 319224 CDS YP_001184815.1 146294391 5078377 complement(3854566..3855372) 1 NC_009438.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 3855372 5078377 Sputcn32_3304 Shewanella putrefaciens CN-32 enoyl-CoA hydratase YP_001184815.1 3854566 R 319224 CDS YP_001184816.1 146294392 5078378 3855891..3856886 1 NC_009438.1 PFAM: response regulator receiver; KEGG: son:SO0570 response regulator; CheC, inhibitor of MCP methylation 3856886 5078378 Sputcn32_3305 Shewanella putrefaciens CN-32 CheC, inhibitor of MCP methylation YP_001184816.1 3855891 D 319224 CDS YP_001184817.1 146294393 5078379 3856905..3857879 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: shm:Shewmr7_3459 diguanylate cyclase; diguanylate cyclase 3857879 5078379 Sputcn32_3306 Shewanella putrefaciens CN-32 diguanylate cyclase YP_001184817.1 3856905 D 319224 CDS YP_001184818.1 146294394 5078380 complement(3857951..3858355) 1 NC_009438.1 PFAM: protein of unknown function DUF1260; KEGG: son:SO0568 hypothetical protein; hypothetical protein 3858355 5078380 Sputcn32_3307 Shewanella putrefaciens CN-32 hypothetical protein YP_001184818.1 3857951 R 319224 CDS YP_001184819.1 146294395 5078381 complement(3858399..3859184) 1 NC_009438.1 KEGG: she:Shewmr4_0569 1-acyl-sn-glycerol-3-phosphate acyltransferases; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 3859184 5078381 Sputcn32_3308 Shewanella putrefaciens CN-32 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001184819.1 3858399 R 319224 CDS YP_001184820.1 146294396 5078382 complement(3859294..3860082) 1 NC_009438.1 PFAM: ABC-3 protein; KEGG: shm:Shewmr7_3462 ABC-3 protein; ABC-3 protein 3860082 5078382 Sputcn32_3309 Shewanella putrefaciens CN-32 ABC-3 protein YP_001184820.1 3859294 R 319224 CDS YP_001184821.1 146294397 5078383 complement(3860088..3860996) 1 NC_009438.1 PFAM: periplasmic solute binding protein; KEGG: shm:Shewmr7_3463 periplasmic solute binding protein; periplasmic solute binding protein 3860996 5078383 Sputcn32_3310 Shewanella putrefaciens CN-32 periplasmic solute binding protein YP_001184821.1 3860088 R 319224 CDS YP_001184822.1 146294398 5078086 complement(3860980..3862164) 1 NC_009438.1 KEGG: shm:Shewmr7_3464 hypothetical protein; hypothetical protein 3862164 5078086 Sputcn32_3311 Shewanella putrefaciens CN-32 hypothetical protein YP_001184822.1 3860980 R 319224 CDS YP_001184823.1 146294399 5078087 complement(3862242..3862532) 1 NC_009438.1 KEGG: shm:Shewmr7_3465 hypothetical protein; hypothetical protein 3862532 5078087 Sputcn32_3312 Shewanella putrefaciens CN-32 hypothetical protein YP_001184823.1 3862242 R 319224 CDS YP_001184824.1 146294400 5078088 3862819..3862944 1 NC_009438.1 KEGG: she:Shewmr4_0564 hypothetical protein; hypothetical protein 3862944 5078088 Sputcn32_3313 Shewanella putrefaciens CN-32 hypothetical protein YP_001184824.1 3862819 D 319224 CDS YP_001184825.1 146294401 5078089 complement(3863119..3864831) 1 NC_009438.1 catalyzes the formation of 10-formyltetrahydrofolate from formate and tetrahydrofolate; formate--tetrahydrofolate ligase 3864831 5078089 Sputcn32_3314 Shewanella putrefaciens CN-32 formate--tetrahydrofolate ligase YP_001184825.1 3863119 R 319224 CDS YP_001184826.1 146294402 5078090 complement(3865006..3865836) 1 NC_009438.1 PFAM: MaoC domain protein dehydratase; KEGG: son:SO0559 MaoC domain protein; dehydratase 3865836 5078090 Sputcn32_3315 Shewanella putrefaciens CN-32 dehydratase YP_001184826.1 3865006 R 319224 CDS YP_001184827.1 146294403 5078091 3866245..3867018 1 NC_009438.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: son:SO0558 smtA protein; type 11 methyltransferase 3867018 5078091 Sputcn32_3316 Shewanella putrefaciens CN-32 type 11 methyltransferase YP_001184827.1 3866245 D 319224 CDS YP_001184828.1 146294404 5078092 complement(3867043..3867942) 1 NC_009438.1 PFAM: GumN family protein; KEGG: son:SO0557 hypothetical protein; GumN family protein 3867942 5078092 Sputcn32_3317 Shewanella putrefaciens CN-32 GumN family protein YP_001184828.1 3867043 R 319224 CDS YP_001184829.1 146294405 5078093 3867991..3868299 1 NC_009438.1 KEGG: shm:Shewmr7_3474 hypothetical protein; hypothetical protein 3868299 5078093 Sputcn32_3318 Shewanella putrefaciens CN-32 hypothetical protein YP_001184829.1 3867991 D 319224 CDS YP_001184830.1 146294406 5078094 3868463..3870217 1 NC_009438.1 PFAM: GGDEF domain containing protein; CBS domain containing protein; EAL domain protein; KEGG: shm:Shewmr7_3475 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 3870217 5078094 Sputcn32_3319 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001184830.1 3868463 D 319224 CDS YP_001184831.1 146294407 5078095 complement(3870231..3870755) 1 NC_009438.1 KEGG: shm:Shewmr7_3476 hypothetical protein; hypothetical protein 3870755 5078095 Sputcn32_3320 Shewanella putrefaciens CN-32 hypothetical protein YP_001184831.1 3870231 R 319224 CDS YP_001184832.1 146294408 5078096 3871028..3871336 1 NC_009438.1 KEGG: shm:Shewmr7_3477 hypothetical protein; hypothetical protein 3871336 5078096 Sputcn32_3321 Shewanella putrefaciens CN-32 hypothetical protein YP_001184832.1 3871028 D 319224 CDS YP_001184833.1 146294409 5078097 complement(3871368..3871877) 1 NC_009438.1 KEGG: shm:Shewmr7_3479 hypothetical protein; hypothetical protein 3871877 5078097 Sputcn32_3322 Shewanella putrefaciens CN-32 hypothetical protein YP_001184833.1 3871368 R 319224 CDS YP_001184834.1 146294410 5078098 3871922..3872386 1 NC_009438.1 KEGG: son:SO0550 hypothetical protein; hypothetical protein 3872386 5078098 Sputcn32_3323 Shewanella putrefaciens CN-32 hypothetical protein YP_001184834.1 3871922 D 319224 CDS YP_001184835.1 146294411 5078099 3872469..3873266 1 NC_009438.1 PFAM: response regulator receiver; KEGG: shm:Shewmr7_3481 response regulator receiver protein; response regulator receiver protein 3873266 5078099 Sputcn32_3324 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001184835.1 3872469 D 319224 CDS YP_001184836.1 146294412 5078100 3873413..3873685 1 NC_009438.1 PFAM: histone family protein DNA-binding protein; KEGG: she:Shewmr4_0548 histone family protein DNA-binding protein; histone family protein DNA-binding protein 3873685 5078100 Sputcn32_3325 Shewanella putrefaciens CN-32 histone family protein DNA-binding protein YP_001184836.1 3873413 D 319224 CDS YP_001184837.1 146294413 5078101 3873983..3874675 1 NC_009438.1 KEGG: she:Shewmr4_0547 hypothetical protein; hypothetical protein 3874675 5078101 Sputcn32_3326 Shewanella putrefaciens CN-32 hypothetical protein YP_001184837.1 3873983 D 319224 CDS YP_001184838.1 146294414 5078102 complement(3874756..3875661) 1 NC_009438.1 TIGRFAM: alpha-L-glutamate ligases, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: son:SO0546 ribosomal protein S6 modification protein; alpha-L-glutamate ligase 3875661 5078102 Sputcn32_3327 Shewanella putrefaciens CN-32 alpha-L-glutamate ligase YP_001184838.1 3874756 R 319224 CDS YP_001184839.1 146294415 5078103 complement(3875822..3877543) 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; KEGG: son:SO0545 response regulator; response regulator receiver modulated diguanylate cyclase/phosphodiesterase 3877543 5078103 Sputcn32_3328 Shewanella putrefaciens CN-32 response regulator receiver modulated diguanylate cyclase/phosphodiesterase YP_001184839.1 3875822 R 319224 CDS YP_001184840.1 146294416 5078104 complement(3877553..3877987) 1 NC_009438.1 PFAM: response regulator receiver; KEGG: she:Shewmr4_0544 response regulator receiver protein; response regulator receiver protein 3877987 5078104 Sputcn32_3329 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001184840.1 3877553 R 319224 CDS YP_001184841.1 146294417 5078105 complement(3877984..3880137) 1 NC_009438.1 KEGG: she:Shewmr4_0543 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; CHASE domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; multi-sensor signal transduction histidine kinase 3880137 5078105 Sputcn32_3330 Shewanella putrefaciens CN-32 multi-sensor signal transduction histidine kinase YP_001184841.1 3877984 R 319224 CDS YP_001184842.1 146294418 5078106 3880446..3880622 1 NC_009438.1 KEGG: shm:Shewmr7_3488 hypothetical protein; hypothetical protein 3880622 5078106 Sputcn32_3331 Shewanella putrefaciens CN-32 hypothetical protein YP_001184842.1 3880446 D 319224 CDS YP_001184843.1 146294419 5078107 3881024..3882379 1 NC_009438.1 PFAM: protein of unknown function DUF1704; KEGG: son:SO0542 hypothetical protein; hypothetical protein 3882379 5078107 Sputcn32_3332 Shewanella putrefaciens CN-32 hypothetical protein YP_001184843.1 3881024 D 319224 CDS YP_001184844.1 146294420 5078108 complement(3882455..3883831) 1 NC_009438.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: sdn:Sden_0649 amino acid carrier protein; amino acid carrier protein 3883831 5078108 Sputcn32_3333 Shewanella putrefaciens CN-32 amino acid carrier protein YP_001184844.1 3882455 R 319224 CDS YP_001184845.1 146294421 5078109 complement(3884078..3885514) 1 NC_009438.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: son:SO0541 metallo-beta-lactamase family protein; beta-lactamase domain-containing protein 3885514 5078109 Sputcn32_3334 Shewanella putrefaciens CN-32 beta-lactamase domain-containing protein YP_001184845.1 3884078 R 319224 CDS YP_001184846.1 146294422 5078110 complement(3885639..3886484) 1 NC_009438.1 KEGG: son:SO0540 hypothetical protein; hypothetical protein 3886484 5078110 Sputcn32_3335 Shewanella putrefaciens CN-32 hypothetical protein YP_001184846.1 3885639 R 319224 CDS YP_001184847.1 146294423 5078111 complement(3886517..3886774) 1 NC_009438.1 KEGG: shm:Shewmr7_3496 redox-active disulfide protein 2; redox-active disulfide protein 2 3886774 5078111 Sputcn32_3336 Shewanella putrefaciens CN-32 redox-active disulfide protein 2 YP_001184847.1 3886517 R 319224 CDS YP_001184848.1 146294424 5078112 complement(3887094..3887420) 1 NC_009438.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0527 hypothetical protein; antibiotic biosynthesis monooxygenase 3887420 5078112 Sputcn32_3337 Shewanella putrefaciens CN-32 antibiotic biosynthesis monooxygenase YP_001184848.1 3887094 R 319224 CDS YP_001184849.1 146294425 5078113 complement(3887494..3887949) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: she:Shewmr4_0525 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3887949 5078113 Sputcn32_3338 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001184849.1 3887494 R 319224 CDS YP_001184850.1 146294426 5078114 3888148..3888558 1 NC_009438.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 3888558 mscL 5078114 mscL Shewanella putrefaciens CN-32 large-conductance mechanosensitive channel YP_001184850.1 3888148 D 319224 CDS YP_001184851.1 146294427 5078115 complement(3888636..3888959) 1 NC_009438.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: son:SO0521 hypothetical protein; antibiotic biosynthesis monooxygenase 3888959 5078115 Sputcn32_3340 Shewanella putrefaciens CN-32 antibiotic biosynthesis monooxygenase YP_001184851.1 3888636 R 319224 CDS YP_001184852.1 146294428 5078116 complement(3889120..3892347) 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: shm:Shewmr7_3513 heavy metal efflux pump, CzcA family; CzcA family heavy metal efflux protein 3892347 5078116 Sputcn32_3341 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001184852.1 3889120 R 319224 CDS YP_001184853.1 146294429 5078117 complement(3892377..3893642) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: son:SO0519 cation efflux protein, putative; RND family efflux transporter MFP subunit 3893642 5078117 Sputcn32_3342 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001184853.1 3892377 R 319224 CDS YP_001184854.1 146294430 5078118 complement(3893653..3895131) 1 NC_009438.1 KEGG: shm:Shewmr7_3515 outer membrane efflux protein; outer membrane efflux protein 3895131 5078118 Sputcn32_3343 Shewanella putrefaciens CN-32 outer membrane efflux protein YP_001184854.1 3893653 R 319224 CDS YP_001184855.1 146294431 5078119 complement(3895462..3895905) 1 NC_009438.1 KEGG: she:Shewmr4_0515 hypothetical protein; hypothetical protein 3895905 5078119 Sputcn32_3344 Shewanella putrefaciens CN-32 hypothetical protein YP_001184855.1 3895462 R 319224 CDS YP_001184856.1 146294432 5078120 complement(3896111..3896317) 1 NC_009438.1 KEGG: shm:Shewmr7_3517 hypothetical protein; hypothetical protein 3896317 5078120 Sputcn32_3345 Shewanella putrefaciens CN-32 hypothetical protein YP_001184856.1 3896111 R 319224 CDS YP_001184857.1 146294433 5078121 complement(3896354..3896719) 1 NC_009438.1 KEGG: son:SO0514 hypothetical protein; hypothetical protein 3896719 5078121 Sputcn32_3346 Shewanella putrefaciens CN-32 hypothetical protein YP_001184857.1 3896354 R 319224 CDS YP_001184858.1 146294434 5078122 3896856..3897287 1 NC_009438.1 PFAM: Class I peptide chain release factor; KEGG: son:SO0513 hypothetical protein; peptidyl-tRNA hydrolase domain-containing protein 3897287 5078122 Sputcn32_3347 Shewanella putrefaciens CN-32 peptidyl-tRNA hydrolase domain-containing protein YP_001184858.1 3896856 D 319224 CDS YP_001184859.1 146294435 5078123 3897406..3897840 1 NC_009438.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 3897840 5078123 Sputcn32_3348 Shewanella putrefaciens CN-32 3-dehydroquinate dehydratase YP_001184859.1 3897406 D 319224 CDS YP_001184860.1 146294436 5078124 3897895..3898572 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: shm:Shewmr7_3522 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 3898572 5078124 Sputcn32_3349 Shewanella putrefaciens CN-32 short-chain dehydrogenase/reductase SDR YP_001184860.1 3897895 D 319224 CDS YP_001184861.1 146294437 5078125 complement(3898635..3899309) 1 NC_009438.1 hypothetical protein 3899309 5078125 Sputcn32_3350 Shewanella putrefaciens CN-32 hypothetical protein YP_001184861.1 3898635 R 319224 CDS YP_001184862.1 146294438 5078126 complement(3899776..3900552) 1 NC_009438.1 KEGG: she:Shewmr4_0507 hypothetical protein; hypothetical protein 3900552 5078126 Sputcn32_3351 Shewanella putrefaciens CN-32 hypothetical protein YP_001184862.1 3899776 R 319224 CDS YP_001184863.1 146294439 5078127 3900712..3902193 1 NC_009438.1 TIGRFAM: UbiD family decarboxylases; PFAM: Carboxylyase-related protein; KEGG: shm:Shewmr7_3525 UbiD family decarboxylases; UbiD family decarboxylase 3902193 5078127 Sputcn32_3352 Shewanella putrefaciens CN-32 UbiD family decarboxylase YP_001184863.1 3900712 D 319224 CDS YP_001184864.1 146294440 5078128 3902306..3903004 1 NC_009438.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 3903004 fre 5078128 fre Shewanella putrefaciens CN-32 FMN reductase YP_001184864.1 3902306 D 319224 CDS YP_001184865.1 146294441 5078129 complement(3903741..3904847) 1 NC_009438.1 hypothetical protein 3904847 5078129 Sputcn32_3354 Shewanella putrefaciens CN-32 hypothetical protein YP_001184865.1 3903741 R 319224 CDS YP_001184866.1 146294442 5078130 complement(3905579..3906211) 1 NC_009438.1 KEGG: she:Shewmr4_0502 conserved hypothetical flavoprotein oxygenase; flavoprotein oxygenase 3906211 5078130 Sputcn32_3355 Shewanella putrefaciens CN-32 flavoprotein oxygenase YP_001184866.1 3905579 R 319224 CDS YP_001184867.1 146294443 5078131 complement(3906229..3907512) 1 NC_009438.1 PFAM: transcriptional regulator domain protein; KEGG: shm:Shewmr7_3532 transcriptional regulator, CadC; transcriptional regulator CadC 3907512 5078131 Sputcn32_3356 Shewanella putrefaciens CN-32 transcriptional regulator CadC YP_001184867.1 3906229 R 319224 CDS YP_001184868.1 146294444 5078132 complement(3907734..3908612) 1 NC_009438.1 KEGG: son:SO0488 copper ABC transporter, permease protein; copper ABC transporter permease 3908612 5078132 Sputcn32_3357 Shewanella putrefaciens CN-32 copper ABC transporter permease YP_001184868.1 3907734 R 319224 CDS YP_001184869.1 146294445 5078133 complement(3908609..3909643) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO0487 copper ABC transporter, ATP-binding protein; ABC transporter-like protein 3909643 5078133 Sputcn32_3358 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001184869.1 3908609 R 319224 CDS YP_001184870.1 146294446 5078134 complement(3909640..3910935) 1 NC_009438.1 PFAM: periplasmic copper-binding; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: son:SO0486 copper ABC transporter, periplasmic copper-binding protein; periplasmic copper-binding protein 3910935 5078134 Sputcn32_3359 Shewanella putrefaciens CN-32 periplasmic copper-binding protein YP_001184870.1 3909640 R 319224 CDS YP_001184871.1 146294447 5078135 complement(3910940..3911431) 1 NC_009438.1 PFAM: NosL family protein; KEGG: son:SO0485 NosL protein; NosL family protein 3911431 5078135 Sputcn32_3360 Shewanella putrefaciens CN-32 NosL family protein YP_001184871.1 3910940 R 319224 CDS YP_001184872.1 146294448 5078136 complement(3911520..3912200) 1 NC_009438.1 KEGG: son:SO0482 formate-dependent nitrite reductase, NrfG protein; formate-dependent nitrite reductase complex subunit NrfG 3912200 5078136 Sputcn32_3361 Shewanella putrefaciens CN-32 formate-dependent nitrite reductase complex subunit NrfG YP_001184872.1 3911520 R 319224 CDS YP_001184873.1 146294449 5077984 complement(3912235..3913017) 1 NC_009438.1 PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type; KEGG: she:Shewmr4_0490 FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase, FKBP-type 3913017 5077984 Sputcn32_3362 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001184873.1 3912235 R 319224 CDS YP_001184874.1 146294450 5077985 complement(3913103..3913543) 1 NC_009438.1 SMART: Rhodanese domain protein; KEGG: shm:Shewmr7_3541 rhodanese domain protein; rhodanese domain-containing protein 3913543 5077985 Sputcn32_3363 Shewanella putrefaciens CN-32 rhodanese domain-containing protein YP_001184874.1 3913103 R 319224 CDS YP_001184875.1 146294451 5077986 complement(3913606..3915735) 1 NC_009438.1 KEGG: she:Shewmr4_0488 cytochrome c, putative; cytochrome c 3915735 5077986 Sputcn32_3364 Shewanella putrefaciens CN-32 cytochrome c YP_001184875.1 3913606 R 319224 CDS YP_001184876.1 146294452 5077987 3916280..3918409 1 NC_009438.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: son:SO0478 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 3918409 5077987 Sputcn32_3365 Shewanella putrefaciens CN-32 cytochrome c-type biogenesis protein CcmF YP_001184876.1 3916280 D 319224 CDS YP_001184877.1 146294453 5077988 3918409..3918828 1 NC_009438.1 PFAM: cytochrome C biogenesis protein; KEGG: shm:Shewmr7_3544 cytochrome c biogenesis protein; cytochrome C biogenesis protein 3918828 5077988 Sputcn32_3366 Shewanella putrefaciens CN-32 cytochrome C biogenesis protein YP_001184877.1 3918409 D 319224 CDS YP_001184878.1 146294454 5077989 3918845..3919429 1 NC_009438.1 PFAM: Redoxin domain protein; KEGG: shm:Shewmr7_3545 redoxin domain protein; redoxin domain-containing protein 3919429 5077989 Sputcn32_3367 Shewanella putrefaciens CN-32 redoxin domain-containing protein YP_001184878.1 3918845 D 319224 CDS YP_001184879.1 146294455 5077990 3919605..3920183 1 NC_009438.1 KEGG: son:SO0474 hypothetical protein; hypothetical protein 3920183 5077990 Sputcn32_3368 Shewanella putrefaciens CN-32 hypothetical protein YP_001184879.1 3919605 D 319224 CDS YP_001184880.1 146294456 5077991 3920249..3920539 1 NC_009438.1 KEGG: shm:Shewmr7_3550 putative mitomycin resistance protein; putative mitomycin resistance protein 3920539 5077991 Sputcn32_3369 Shewanella putrefaciens CN-32 putative mitomycin resistance protein YP_001184880.1 3920249 D 319224 CDS YP_001184881.1 146294457 5077992 complement(3920543..3921625) 1 NC_009438.1 PFAM: protein of unknown function UPF0118; KEGG: she:Shewmr4_0479 protein of unknown function UPF0118; hypothetical protein 3921625 5077992 Sputcn32_3370 Shewanella putrefaciens CN-32 hypothetical protein YP_001184881.1 3920543 R 319224 CDS YP_001184882.1 146294458 5077993 complement(3921696..3922760) 1 NC_009438.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: she:Shewmr4_0476 2-nitropropane dioxygenase, NPD; 2-nitropropane dioxygenase 3922760 5077993 Sputcn32_3371 Shewanella putrefaciens CN-32 2-nitropropane dioxygenase YP_001184882.1 3921696 R 319224 CDS YP_001184883.1 146294459 5077994 complement(3922843..3923703) 1 NC_009438.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 3923703 ubiA 5077994 ubiA Shewanella putrefaciens CN-32 4-hydroxybenzoate octaprenyltransferase YP_001184883.1 3922843 R 319224 CDS YP_001184884.1 146294460 5077995 complement(3923849..3926017) 1 NC_009438.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 3926017 uvrD 5077995 uvrD Shewanella putrefaciens CN-32 DNA-dependent helicase II YP_001184884.1 3923849 R 319224 CDS YP_001184885.1 146294461 5077997 3926965..3928410 1 NC_009438.1 KEGG: pst:PSPTO_0021 hypothetical protein; hypothetical protein 3928410 5077997 Sputcn32_3375 Shewanella putrefaciens CN-32 hypothetical protein YP_001184885.1 3926965 D 319224 CDS YP_001184886.1 146294462 5077998 3928641..3931274 1 NC_009438.1 PFAM: SNF2-related protein; helicase domain protein; type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: pst:PSPTO_0017 helicase/SNF2 family domain protein; helicase domain-containing protein 3931274 5077998 Sputcn32_3376 Shewanella putrefaciens CN-32 helicase domain-containing protein YP_001184886.1 3928641 D 319224 CDS YP_001184887.1 146294463 5077999 3931857..3933056 1 NC_009438.1 KEGG: psb:Psyr_3988 hypothetical protein; hypothetical protein 3933056 5077999 Sputcn32_3377 Shewanella putrefaciens CN-32 hypothetical protein YP_001184887.1 3931857 D 319224 CDS YP_001184888.1 146294464 5078000 complement(3933082..3933519) 1 NC_009438.1 PFAM: NUDIX hydrolase; KEGG: son:SO0464 MutT/nudix family protein; NUDIX hydrolase 3933519 5078000 Sputcn32_3378 Shewanella putrefaciens CN-32 NUDIX hydrolase YP_001184888.1 3933082 R 319224 CDS YP_001184889.1 146294465 5078001 3933916..3935406 1 NC_009438.1 PFAM: protein of unknown function DUF853, NPT hydrolase putative; KEGG: shm:Shewmr7_3566 protein of unknown function DUF853, NPT hydrolase putative; hypothetical protein 3935406 5078001 Sputcn32_3379 Shewanella putrefaciens CN-32 hypothetical protein YP_001184889.1 3933916 D 319224 CDS YP_001184890.1 146294466 5078002 3935721..3935843 1 NC_009438.1 KEGG: shm:Shewmr7_3567 hypothetical protein; hypothetical protein 3935843 5078002 Sputcn32_3380 Shewanella putrefaciens CN-32 hypothetical protein YP_001184890.1 3935721 D 319224 CDS YP_001184891.1 146294467 5078003 3936082..3937038 1 NC_009438.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: she:Shewmr4_0461 TRAP transporter solute receptor, TAXI family; TRAP transporter solute receptor TAXI family protein 3937038 5078003 Sputcn32_3381 Shewanella putrefaciens CN-32 TRAP transporter solute receptor TAXI family protein YP_001184891.1 3936082 D 319224 CDS YP_001184892.1 146294468 5078004 3937142..3939175 1 NC_009438.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: she:Shewmr4_0460 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 3939175 5078004 Sputcn32_3382 Shewanella putrefaciens CN-32 TRAP transporter, 4TM/12TM fusion protein YP_001184892.1 3937142 D 319224 CDS YP_001184893.1 146294469 5078005 3939221..3939625 1 NC_009438.1 KEGG: she:Shewmr4_0459 hypothetical protein; hypothetical protein 3939625 5078005 Sputcn32_3383 Shewanella putrefaciens CN-32 hypothetical protein YP_001184893.1 3939221 D 319224 CDS YP_001184894.1 146294470 5078006 complement(3939622..3940341) 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: shm:Shewmr7_2789 regulatory protein GntR, HTH; regulatory protein GntR 3940341 5078006 Sputcn32_3384 Shewanella putrefaciens CN-32 regulatory protein GntR YP_001184894.1 3939622 R 319224 CDS YP_001184895.1 146294471 5078007 3940625..3941863 1 NC_009438.1 PFAM: outer membrane porin; KEGG: shm:Shewmr7_2788 outer membrane porin; outer membrane porin 3941863 5078007 Sputcn32_3385 Shewanella putrefaciens CN-32 outer membrane porin YP_001184895.1 3940625 D 319224 CDS YP_001184896.1 146294472 5078008 3942003..3943739 1 NC_009438.1 PFAM: Tannase and feruloyl esterase; KEGG: sfr:Sfri_3696 feruloyl esterase; tannase and feruloyl esterase 3943739 5078008 Sputcn32_3386 Shewanella putrefaciens CN-32 tannase and feruloyl esterase YP_001184896.1 3942003 D 319224 CDS YP_001184897.1 146294473 5078009 3944294..3945967 1 NC_009438.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: sfr:Sfri_3694 twin-arginine translocation pathway signal; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3945967 5078009 Sputcn32_3387 Shewanella putrefaciens CN-32 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_001184897.1 3944294 D 319224 CDS YP_001184898.1 146294474 5078010 3946036..3946386 1 NC_009438.1 KEGG: shm:Shewmr7_2786 hypothetical protein; hypothetical protein 3946386 5078010 Sputcn32_3388 Shewanella putrefaciens CN-32 hypothetical protein YP_001184898.1 3946036 D 319224 CDS YP_001184899.1 146294475 5078011 complement(3946714..3946929) 1 NC_009438.1 hypothetical protein 3946929 5078011 Sputcn32_3389 Shewanella putrefaciens CN-32 hypothetical protein YP_001184899.1 3946714 R 319224 CDS YP_001184900.1 146294476 5078012 complement(3947252..3948226) 1 NC_009438.1 KEGG: she:Shewmr4_0458 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 3948226 5078012 Sputcn32_3390 Shewanella putrefaciens CN-32 PAS/PAC sensor-containing diguanylate cyclase YP_001184900.1 3947252 R 319224 CDS YP_001184901.1 146294477 5078013 complement(3948388..3948723) 1 NC_009438.1 PFAM: peptidylprolyl isomerase, FKBP-type; KEGG: son:SO0453 peptidyl-prolyl cis-trans isomerase FkbP; peptidylprolyl isomerase, FKBP-type 3948723 5078013 Sputcn32_3391 Shewanella putrefaciens CN-32 peptidylprolyl isomerase, FKBP-type YP_001184901.1 3948388 R 319224 CDS YP_001184902.1 146294478 5078014 3948848..3949384 1 NC_009438.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: son:SO0452 thioredoxin 2; thioredoxin 3949384 5078014 Sputcn32_3392 Shewanella putrefaciens CN-32 thioredoxin YP_001184902.1 3948848 D 319224 CDS YP_001184903.1 146294479 5078015 complement(3949466..3950866) 1 NC_009438.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: she:Shewmr4_0455 anion transporter; anion transporter 3950866 5078015 Sputcn32_3393 Shewanella putrefaciens CN-32 anion transporter YP_001184903.1 3949466 R 319224 CDS YP_001184904.1 146294480 5078016 3951459..3952625 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: she:Shewmr4_0452 major facilitator superfamily MFS_1; major facilitator superfamily transporter 3952625 5078016 Sputcn32_3394 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001184904.1 3951459 D 319224 CDS YP_001184905.1 146294481 5078017 complement(3952702..3954324) 1 NC_009438.1 PFAM: PepSY-associated TM helix domain protein; KEGG: shm:Shewmr7_3578 PepSY-associated TM helix domain protein; PepSY-associated TM helix domain-containing protein 3954324 5078017 Sputcn32_3395 Shewanella putrefaciens CN-32 PepSY-associated TM helix domain-containing protein YP_001184905.1 3952702 R 319224 CDS YP_001184906.1 146294482 5078018 complement(3954330..3954620) 1 NC_009438.1 KEGG: son:SO0448 hypothetical protein; hypothetical protein 3954620 5078018 Sputcn32_3396 Shewanella putrefaciens CN-32 hypothetical protein YP_001184906.1 3954330 R 319224 CDS YP_001184907.1 146294483 5078019 complement(3954624..3954881) 1 NC_009438.1 KEGG: son:SO0447 hypothetical protein; hypothetical protein 3954881 5078019 Sputcn32_3397 Shewanella putrefaciens CN-32 hypothetical protein YP_001184907.1 3954624 R 319224 CDS YP_001184908.1 146294484 5078020 3955285..3956172 1 NC_009438.1 PFAM: band 7 protein; KEGG: shm:Shewmr7_3581 band 7 protein; hypothetical protein 3956172 5078020 Sputcn32_3398 Shewanella putrefaciens CN-32 hypothetical protein YP_001184908.1 3955285 D 319224 CDS YP_001184909.1 146294485 5078021 complement(3956291..3957778) 1 NC_009438.1 PFAM: permease; KEGG: son:SO0444 hypothetical protein; permease 3957778 5078021 Sputcn32_3399 Shewanella putrefaciens CN-32 permease YP_001184909.1 3956291 R 319224 CDS YP_001184910.1 146294486 5078022 complement(3957781..3958251) 1 NC_009438.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; zinc-responsive transcriptional regulator 3958251 zntR 5078022 zntR Shewanella putrefaciens CN-32 zinc-responsive transcriptional regulator YP_001184910.1 3957781 R 319224 CDS YP_001184911.1 146294487 5078023 3958589..3960220 1 NC_009438.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3960220 purH 5078023 purH Shewanella putrefaciens CN-32 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_001184911.1 3958589 D 319224 CDS YP_001184912.1 146294488 5078024 3960291..3961589 1 NC_009438.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 3961589 5078024 Sputcn32_3402 Shewanella putrefaciens CN-32 phosphoribosylamine--glycine ligase YP_001184912.1 3960291 D 319224 CDS YP_001184913.1 146294489 5078025 3961773..3962000 1 NC_009438.1 KEGG: shm:Shewmr7_3587 hypothetical protein; hypothetical protein 3962000 5078025 Sputcn32_3403 Shewanella putrefaciens CN-32 hypothetical protein YP_001184913.1 3961773 D 319224 CDS YP_001184914.1 146294490 5078026 complement(3962004..3962807) 1 NC_009438.1 PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: shm:Shewmr7_3588 short-chain dehydrogenase/reductase SDR; short chain dehydrogenase 3962807 5078026 Sputcn32_3404 Shewanella putrefaciens CN-32 short chain dehydrogenase YP_001184914.1 3962004 R 319224 CDS YP_001184915.1 146294491 5078027 complement(3962884..3965463) 1 NC_009438.1 KEGG: son:SO0437 sensory box protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 3965463 5078027 Sputcn32_3405 Shewanella putrefaciens CN-32 PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001184915.1 3962884 R 319224 CDS YP_001184916.1 146294492 5078028 complement(3965776..3966840) 1 NC_009438.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3966840 hemE 5078028 hemE Shewanella putrefaciens CN-32 uroporphyrinogen decarboxylase YP_001184916.1 3965776 R 319224 CDS YP_001184917.1 146294493 5078029 complement(3966821..3967225) 1 NC_009438.1 hypothetical protein 3967225 5078029 Sputcn32_3407 Shewanella putrefaciens CN-32 hypothetical protein YP_001184917.1 3966821 R 319224 CDS YP_001184918.1 146294494 5078030 3967286..3967783 1 NC_009438.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 3967783 5078030 Sputcn32_3408 Shewanella putrefaciens CN-32 anti-RNA polymerase sigma 70 factor YP_001184918.1 3967286 D 319224 CDS YP_001184919.1 146294495 5078031 complement(3967862..3970459) 1 NC_009438.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 3970459 5078031 Sputcn32_3409 Shewanella putrefaciens CN-32 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_001184919.1 3967862 R 319224 CDS YP_001184920.1 146294496 5078032 3970895..3971548 1 NC_009438.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 3971548 5078032 Sputcn32_3410 Shewanella putrefaciens CN-32 2-deoxyglucose-6-phosphatase YP_001184920.1 3970895 D 319224 CDS YP_001184921.1 146294497 5078033 3971603..3971929 1 NC_009438.1 KEGG: son:SO0430 hypothetical protein; hypothetical protein 3971929 5078033 Sputcn32_3411 Shewanella putrefaciens CN-32 hypothetical protein YP_001184921.1 3971603 D 319224 CDS YP_001184922.1 146294498 5078034 complement(3971978..3974020) 1 NC_009438.1 PFAM: peptidase M13, neprilysin; peptidase M13; KEGG: son:SO0429 peptidase, M13 family; endothelin-converting protein 1 3974020 5078034 Sputcn32_3412 Shewanella putrefaciens CN-32 endothelin-converting protein 1 YP_001184922.1 3971978 R 319224 CDS YP_001184923.1 146294499 5078035 complement(3974221..3976437) 1 NC_009438.1 PFAM: surface antigen (D15); Patatin; KEGG: she:Shewmr4_0432 patatin; patatin 3976437 5078035 Sputcn32_3413 Shewanella putrefaciens CN-32 patatin YP_001184923.1 3974221 R 319224 CDS YP_001184924.1 146294500 5079806 complement(3981125..3982552) 1 NC_009438.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 3982552 5079806 Sputcn32_3415 Shewanella putrefaciens CN-32 dihydrolipoamide dehydrogenase YP_001184924.1 3981125 R 319224 CDS YP_001184925.1 146294501 5079807 complement(3982700..3984709) 1 NC_009438.1 KEGG: son:SO0425 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 3984709 5079807 Sputcn32_3416 Shewanella putrefaciens CN-32 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_001184925.1 3982700 R 319224 CDS YP_001184926.1 146294502 5079808 complement(3984722..3987388) 1 NC_009438.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 3987388 aceE 5079808 aceE Shewanella putrefaciens CN-32 pyruvate dehydrogenase subunit E1 YP_001184926.1 3984722 R 319224 CDS YP_001184927.1 146294503 5079809 complement(3987471..3988223) 1 NC_009438.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 3988223 pdhR 5079809 pdhR Shewanella putrefaciens CN-32 transcriptional regulator PdhR YP_001184927.1 3987471 R 319224 CDS YP_001184928.1 146294504 5079810 complement(3988733..3989584) 1 NC_009438.1 involved in regulation of beta-lactamase; putative signaling protein; regulatory protein AmpE 3989584 5079810 Sputcn32_3419 Shewanella putrefaciens CN-32 regulatory protein AmpE YP_001184928.1 3988733 R 319224 CDS YP_001184929.1 146294505 5079811 complement(3989784..3990326) 1 NC_009438.1 PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: son:SO0421 AmpD protein; N-acetyl-anhydromuranmyl-L-alanine amidase 3990326 5079811 Sputcn32_3420 Shewanella putrefaciens CN-32 N-acetyl-anhydromuranmyl-L-alanine amidase YP_001184929.1 3989784 R 319224 CDS YP_001184930.1 146294506 5079812 3990645..3991532 1 NC_009438.1 KEGG: shm:Shewmr7_3603 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 3991532 5079812 Sputcn32_3421 Shewanella putrefaciens CN-32 nicotinate-nucleotide pyrophosphorylase YP_001184930.1 3990645 D 319224 CDS YP_001184931.1 146294507 5079813 3992452..3992898 1 NC_009438.1 PFAM: Fimbrial protein pilin; KEGG: dar:Daro_3356 fimbrial protein pilin:bacterial general secretion pathway protein H; fimbrial protein pilin 3992898 5079813 Sputcn32_3422 Shewanella putrefaciens CN-32 fimbrial protein pilin YP_001184931.1 3992452 D 319224 CDS YP_001184932.1 146294508 5079814 3992982..3994691 1 NC_009438.1 TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II, protein E domain protein; KEGG: son:SO0416 type IV pilus biogenesis protein PilB; type IV-A pilus assembly ATPase PilB 3994691 5079814 Sputcn32_3423 Shewanella putrefaciens CN-32 type IV-A pilus assembly ATPase PilB YP_001184932.1 3992982 D 319224 CDS YP_001184933.1 146294509 5079815 3995142..3996407 1 NC_009438.1 PFAM: type II secretion system protein; KEGG: shm:Shewmr7_3606 type II secretion system protein; type II secretion system protein 3996407 5079815 Sputcn32_3424 Shewanella putrefaciens CN-32 type II secretion system protein YP_001184933.1 3995142 D 319224 CDS YP_001184934.1 146294510 5079816 3996607..3997533 1 NC_009438.1 PFAM: peptidase A24A, prepilin type IV; peptidase A24A domain protein; KEGG: son:SO0414 leader peptidase (prepilin peptidase) / N-methyltransferase; prepilin peptidase 3997533 5079816 Sputcn32_3425 Shewanella putrefaciens CN-32 prepilin peptidase YP_001184934.1 3996607 D 319224 CDS YP_001184935.1 146294511 5079817 3997877..3998494 1 NC_009438.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 3998494 coaE 5079817 coaE Shewanella putrefaciens CN-32 dephospho-CoA kinase YP_001184935.1 3997877 D 319224 CDS YP_001184936.1 146294512 5079818 3998487..3999221 1 NC_009438.1 PFAM: protein of unknown function DUF1342; KEGG: she:Shewmr4_0416 protein of unknown function DUF1342; hypothetical protein 3999221 5079818 Sputcn32_3427 Shewanella putrefaciens CN-32 hypothetical protein YP_001184936.1 3998487 D 319224 CDS YP_001184937.1 146294513 5079819 3999379..3999588 1 NC_009438.1 PFAM: protein of unknown function DUF329; KEGG: shm:Shewmr7_3610 protein of unknown function DUF329; hypothetical protein 3999588 5079819 Sputcn32_3428 Shewanella putrefaciens CN-32 hypothetical protein YP_001184937.1 3999379 D 319224 CDS YP_001184938.1 146294514 5079820 3999640..4000044 1 NC_009438.1 TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: she:Shewmr4_0414 mutator MutT protein; mutator MutT protein 4000044 5079820 Sputcn32_3429 Shewanella putrefaciens CN-32 mutator MutT protein YP_001184938.1 3999640 D 319224 CDS YP_001184939.1 146294515 5079821 4000551..4001087 1 NC_009438.1 KEGG: shm:Shewmr7_3612 hypothetical protein; hypothetical protein 4001087 5079821 Sputcn32_3430 Shewanella putrefaciens CN-32 hypothetical protein YP_001184939.1 4000551 D 319224 CDS YP_001184940.1 146294516 5079822 complement(4001499..4002425) 1 NC_009438.1 PFAM: Ppx/GppA phosphatase; KEGG: shm:Shewmr7_3613 Ppx/GppA phosphatase; Ppx/GppA phosphatase 4002425 5079822 Sputcn32_3431 Shewanella putrefaciens CN-32 Ppx/GppA phosphatase YP_001184940.1 4001499 R 319224 CDS YP_001184941.1 146294517 5079823 complement(4002426..4003745) 1 NC_009438.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 4003745 5079823 Sputcn32_3432 Shewanella putrefaciens CN-32 ATP-dependent RNA helicase RhlB YP_001184941.1 4002426 R 319224 CDS YP_001184942.1 146294518 5079824 4003898..4004224 1 NC_009438.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: shm:Shewmr7_3615 thioredoxin; thioredoxin 4004224 5079824 Sputcn32_3433 Shewanella putrefaciens CN-32 thioredoxin YP_001184942.1 4003898 D 319224 CDS YP_001184943.1 146294519 5079825 4004437..4005702 1 NC_009438.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4005702 rho 5079825 rho Shewanella putrefaciens CN-32 transcription termination factor Rho YP_001184943.1 4004437 D 319224 CDS YP_001184944.1 146294520 5079826 complement(4005754..4006680) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: she:Shewmr4_0408 transcriptional regulator, LysR family; LysR family transcriptional regulator 4006680 5079826 Sputcn32_3435 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001184944.1 4005754 R 319224 CDS YP_001184945.1 146294521 5079827 4006815..4007837 1 NC_009438.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: shm:Shewmr7_3618 NADPH:quinone reductase; alcohol dehydrogenase 4007837 5079827 Sputcn32_3436 Shewanella putrefaciens CN-32 alcohol dehydrogenase YP_001184945.1 4006815 D 319224 CDS YP_001184946.1 146294522 5079828 4007834..4008118 1 NC_009438.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: she:Shewmr4_0406 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 4008118 5079828 Sputcn32_3437 Shewanella putrefaciens CN-32 antibiotic biosynthesis monooxygenase YP_001184946.1 4007834 D 319224 CDS YP_001184947.1 146294523 5079829 complement(4008169..4008900) 1 NC_009438.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 4008900 frdB 5079829 frdB Shewanella putrefaciens CN-32 fumarate reductase iron-sulfur subunit YP_001184947.1 4008169 R 319224 CDS YP_001184948.1 146294524 5079830 complement(4008900..4010906) 1 NC_009438.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 4010906 5079830 Sputcn32_3439 Shewanella putrefaciens CN-32 fumarate reductase flavoprotein subunit YP_001184948.1 4008900 R 319224 CDS YP_001184949.1 146294525 5079831 complement(4010992..4011663) 1 NC_009438.1 PFAM: fumarate reductase respiratory complex, transmembrane subunit; KEGG: she:Shewmr4_0403 fumarate reductase respiratory complex, transmembrane subunit; fumarate reductase respiratory complex, transmembrane subunit 4011663 5079831 Sputcn32_3440 Shewanella putrefaciens CN-32 fumarate reductase respiratory complex, transmembrane subunit YP_001184949.1 4010992 R 319224 CDS YP_001184950.1 146294526 5079832 complement(4011845..4012570) 1 NC_009438.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 4012570 5079832 Sputcn32_3441 Shewanella putrefaciens CN-32 fumarate reductase cytochrome b-556 subunit YP_001184950.1 4011845 R 319224 CDS YP_001184951.1 146294527 5079833 4013025..4013906 1 NC_009438.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 4013906 prmA 5079833 prmA Shewanella putrefaciens CN-32 50S ribosomal protein L11 methyltransferase YP_001184951.1 4013025 D 319224 CDS YP_001184952.1 146294528 5079834 4014081..4015049 1 NC_009438.1 TIGRFAM: putative TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase, DuS; dihydroorotate dehydrogenase; KEGG: son:SO0394 tRNA-dihydrouridine synthase B; nifR3 family TIM-barrel protein 4015049 5079834 Sputcn32_3443 Shewanella putrefaciens CN-32 nifR3 family TIM-barrel protein YP_001184952.1 4014081 D 319224 CDS YP_001184953.1 146294529 5079835 4015066..4015371 1 NC_009438.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 4015371 fis 5079835 fis Shewanella putrefaciens CN-32 DNA-binding protein Fis YP_001184953.1 4015066 D 319224 CDS YP_001184954.1 146294530 5079836 complement(4015521..4015808) 1 NC_009438.1 KEGG: sdn:Sden_3629 hypothetical protein; hypothetical protein 4015808 5079836 Sputcn32_3445 Shewanella putrefaciens CN-32 hypothetical protein YP_001184954.1 4015521 R 319224 CDS YP_001184955.1 146294531 5079837 complement(4015817..4016251) 1 NC_009438.1 PFAM: type IV pilus assembly PilZ; KEGG: sdn:Sden_3630 type IV pilus assembly PilZ; type IV pilus assembly PilZ 4016251 5079837 Sputcn32_3446 Shewanella putrefaciens CN-32 type IV pilus assembly PilZ YP_001184955.1 4015817 R 319224 CDS YP_001184956.1 146294532 5079838 complement(4016286..4017203) 1 NC_009438.1 PFAM: OmpA/MotB domain protein; KEGG: sdn:Sden_3631 OmpA/MotB; OmpA/MotB domain-containing protein 4017203 5079838 Sputcn32_3447 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001184956.1 4016286 R 319224 CDS YP_001184957.1 146294533 5079839 complement(4017203..4018060) 1 NC_009438.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: sdn:Sden_3632 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 4018060 5079839 Sputcn32_3448 Shewanella putrefaciens CN-32 MotA/TolQ/ExbB proton channel YP_001184957.1 4017203 R 319224 CDS YP_001184958.1 146294534 5079840 complement(4018083..4018799) 1 NC_009438.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 4018799 fliA 5079840 fliA Shewanella putrefaciens CN-32 flagellar biosynthesis sigma factor YP_001184958.1 4018083 R 319224 CDS YP_001184959.1 146294535 5079841 complement(4018809..4019276) 1 NC_009438.1 PFAM: flagellar basal body-associated protein FliL; KEGG: sdn:Sden_3634 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL 4019276 5079841 Sputcn32_3450 Shewanella putrefaciens CN-32 flagellar basal body-associated protein FliL YP_001184959.1 4018809 R 319224 CDS YP_001184960.1 146294536 5079842 complement(4019292..4020473) 1 NC_009438.1 PFAM: flagellar hook-length control protein; KEGG: sdn:Sden_3635 flagellar hook-length control protein; flagellar hook-length control protein 4020473 5079842 Sputcn32_3451 Shewanella putrefaciens CN-32 flagellar hook-length control protein YP_001184960.1 4019292 R 319224 CDS YP_001184961.1 146294537 5079843 complement(4020463..4020789) 1 NC_009438.1 KEGG: sdn:Sden_3636 hypothetical protein; hypothetical protein 4020789 5079843 Sputcn32_3452 Shewanella putrefaciens CN-32 hypothetical protein YP_001184961.1 4020463 R 319224 CDS YP_001184962.1 146294538 5079844 complement(4020758..4021138) 1 NC_009438.1 PFAM: flagellar protein FliS; KEGG: sdn:Sden_3637 flagellar protein FliS; flagellar protein FliS 4021138 5079844 Sputcn32_3453 Shewanella putrefaciens CN-32 flagellar protein FliS YP_001184962.1 4020758 R 319224 CDS YP_001184963.1 146294539 5079845 complement(4021152..4022498) 1 NC_009438.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: sdn:Sden_3638 flagellar hook-associated 2-like protein; flagellar hook-associated 2 domain-containing protein 4022498 5079845 Sputcn32_3454 Shewanella putrefaciens CN-32 flagellar hook-associated 2 domain-containing protein YP_001184963.1 4021152 R 319224 CDS YP_001184964.1 146294540 5079846 complement(4022795..4023607) 1 NC_009438.1 PFAM: flagellin domain protein; KEGG: sdn:Sden_3639 flagellin-like protein; flagellin domain-containing protein 4023607 5079846 Sputcn32_3455 Shewanella putrefaciens CN-32 flagellin domain-containing protein YP_001184964.1 4022795 R 319224 CDS YP_001184965.1 146294541 5079847 complement(4023845..4024648) 1 NC_009438.1 PFAM: flagellin domain protein; KEGG: sdn:Sden_3639 flagellin-like protein; flagellin domain-containing protein 4024648 5079847 Sputcn32_3456 Shewanella putrefaciens CN-32 flagellin domain-containing protein YP_001184965.1 4023845 R 319224 CDS YP_001184966.1 146294542 5079848 complement(4024793..4025806) 1 NC_009438.1 KEGG: sdn:Sden_3640 hypothetical protein; hypothetical protein 4025806 5079848 Sputcn32_3457 Shewanella putrefaciens CN-32 hypothetical protein YP_001184966.1 4024793 R 319224 CDS YP_001184967.1 146294543 5079849 complement(4025819..4026736) 1 NC_009438.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: sdn:Sden_3641 flagellin-like protein; flagellar hook-associated protein 3 4026736 5079849 Sputcn32_3458 Shewanella putrefaciens CN-32 flagellar hook-associated protein 3 YP_001184967.1 4025819 R 319224 CDS YP_001184968.1 146294544 5079850 complement(4026748..4028121) 1 NC_009438.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_3642 flagellar hook-associated protein; flagellar hook-associated protein FlgK 4028121 5079850 Sputcn32_3459 Shewanella putrefaciens CN-32 flagellar hook-associated protein FlgK YP_001184968.1 4026748 R 319224 CDS YP_001184969.1 146294545 5079851 complement(4028118..4028525) 1 NC_009438.1 FlgJ; flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; like the lateral flagella FlgJ in Vibrio parahaemolyticus this protein does not contains a C-terminal muramidase domain; peptidoglycan hydrolase 4028525 flgJ 5079851 flgJ Shewanella putrefaciens CN-32 peptidoglycan hydrolase YP_001184969.1 4028118 R 319224 CDS YP_001184970.1 146294546 5079852 complement(4028525..4029643) 1 NC_009438.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 4029643 flgI 5079852 flgI Shewanella putrefaciens CN-32 flagellar basal body P-ring protein YP_001184970.1 4028525 R 319224 CDS YP_001184971.1 146294547 5079853 complement(4029659..4030321) 1 NC_009438.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 4030321 flgH 5079853 flgH Shewanella putrefaciens CN-32 flagellar basal body L-ring protein YP_001184971.1 4029659 R 319224 CDS YP_001184972.1 146294548 5079854 complement(4030332..4031117) 1 NC_009438.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_3646 flagellar basal-body rod FlgG; flagellar basal-body rod protein FlgG 4031117 5079854 Sputcn32_3463 Shewanella putrefaciens CN-32 flagellar basal-body rod protein FlgG YP_001184972.1 4030332 R 319224 CDS YP_001184973.1 146294549 5079855 complement(4031129..4031863) 1 NC_009438.1 TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; KEGG: sdn:Sden_3647 flagellar basal-body rod FlgF; flagellar basal-body rod protein FlgF 4031863 5079855 Sputcn32_3464 Shewanella putrefaciens CN-32 flagellar basal-body rod protein FlgF YP_001184973.1 4031129 R 319224 CDS YP_001184974.1 146294550 5080500 complement(4031878..4033065) 1 NC_009438.1 the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar hook protein FlgE 4033065 flgE 5080500 flgE Shewanella putrefaciens CN-32 flagellar hook protein FlgE YP_001184974.1 4031878 R 319224 CDS YP_001184975.1 146294551 5080501 complement(4033087..4033749) 1 NC_009438.1 PFAM: flagellar hook capping protein; KEGG: sdn:Sden_3649 flagellar hook capping protein; flagellar hook capping protein 4033749 5080501 Sputcn32_3466 Shewanella putrefaciens CN-32 flagellar hook capping protein YP_001184975.1 4033087 R 319224 CDS YP_001184976.1 146294552 5080502 complement(4033751..4034167) 1 NC_009438.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: sdn:Sden_3650 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC 4034167 5080502 Sputcn32_3467 Shewanella putrefaciens CN-32 flagellar basal-body rod protein FlgC YP_001184976.1 4033751 R 319224 CDS YP_001184977.1 146294553 5080503 complement(4034176..4034526) 1 NC_009438.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar basal body rod protein FlgB 4034526 flgB 5080503 flgB Shewanella putrefaciens CN-32 flagellar basal body rod protein FlgB YP_001184977.1 4034176 R 319224 CDS YP_001184978.1 146294554 5080504 4034624..4035361 1 NC_009438.1 PFAM: SAF domain; KEGG: sdn:Sden_3652 flageller protein FlgA; SAF domain-containing protein 4035361 5080504 Sputcn32_3469 Shewanella putrefaciens CN-32 SAF domain-containing protein YP_001184978.1 4034624 D 319224 CDS YP_001184979.1 146294555 5080505 4035461..4035745 1 NC_009438.1 KEGG: sdn:Sden_3653 hypothetical protein; hypothetical protein 4035745 5080505 Sputcn32_3470 Shewanella putrefaciens CN-32 hypothetical protein YP_001184979.1 4035461 D 319224 CDS YP_001184980.1 146294556 5080506 4035735..4036190 1 NC_009438.1 KEGG: sdn:Sden_3654 hypothetical protein; hypothetical protein 4036190 5080506 Sputcn32_3471 Shewanella putrefaciens CN-32 hypothetical protein YP_001184980.1 4035735 D 319224 CDS YP_001184981.1 146294557 5080507 complement(4036267..4036689) 1 NC_009438.1 KEGG: sdn:Sden_3655 hypothetical protein; hypothetical protein 4036689 5080507 Sputcn32_3472 Shewanella putrefaciens CN-32 hypothetical protein YP_001184981.1 4036267 R 319224 CDS YP_001184982.1 146294558 5080508 complement(4036667..4038016) 1 NC_009438.1 KEGG: sdn:Sden_3656 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+-transporting two-sector ATPase, alpha/beta subunit, central region; H+-transporting two-sector ATPase, alpha/beta subunit domain protein; SMART: AAA ATPase; FliI/YscN family ATPase 4038016 5080508 Sputcn32_3473 Shewanella putrefaciens CN-32 FliI/YscN family ATPase YP_001184982.1 4036667 R 319224 CDS YP_001184983.1 146294559 5080509 complement(4037994..4038701) 1 NC_009438.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 4038701 fliH 5080509 fliH Shewanella putrefaciens CN-32 flagellar assembly protein H YP_001184983.1 4037994 R 319224 CDS YP_001184984.1 146294560 5080510 complement(4038701..4039687) 1 NC_009438.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 4039687 fliG 5080510 fliG Shewanella putrefaciens CN-32 flagellar motor switch protein G YP_001184984.1 4038701 R 319224 CDS YP_001184985.1 146294561 5080511 complement(4039704..4041380) 1 NC_009438.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; flagellar MS-ring protein 4041380 fliF 5080511 fliF Shewanella putrefaciens CN-32 flagellar MS-ring protein YP_001184985.1 4039704 R 319224 CDS YP_001184986.1 146294562 5080512 complement(4041393..4041731) 1 NC_009438.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: sdn:Sden_3660 flagellar hook-basal body complex protein (FliE); flagellar hook-basal body complex subunit FliE 4041731 5080512 Sputcn32_3477 Shewanella putrefaciens CN-32 flagellar hook-basal body complex subunit FliE YP_001184986.1 4041393 R 319224 CDS YP_001184987.1 146294563 5080513 complement(4041758..4043068) 1 NC_009438.1 PFAM: sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: sdn:Sden_3661 sigma-54 factor, interaction region; sigma-54 dependent trancsriptional regulator 4043068 5080513 Sputcn32_3478 Shewanella putrefaciens CN-32 sigma-54 dependent trancsriptional regulator YP_001184987.1 4041758 R 319224 CDS YP_001184988.1 146294564 5080514 4044144..4045025 1 NC_009438.1 KEGG: sdn:Sden_3662 hypothetical protein; hypothetical protein 4045025 5080514 Sputcn32_3479 Shewanella putrefaciens CN-32 hypothetical protein YP_001184988.1 4044144 D 319224 CDS YP_001184989.1 146294565 5080515 4045003..4045377 1 NC_009438.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: sdn:Sden_3663 surface presentation of antigens (SpoA) protein; flagellar motor switch protein FliN 4045377 5080515 Sputcn32_3480 Shewanella putrefaciens CN-32 flagellar motor switch protein FliN YP_001184989.1 4045003 D 319224 CDS YP_001184990.1 146294566 5080516 4045374..4046108 1 NC_009438.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 4046108 fliP 5080516 fliP Shewanella putrefaciens CN-32 flagellar biosynthesis protein FliP YP_001184990.1 4045374 D 319224 CDS YP_001184991.1 146294567 5080517 4046113..4046382 1 NC_009438.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ, family 3; KEGG: sdn:Sden_3665 export protein FliQ, family 3; flagellar biosynthetic protein FliQ 4046382 5080517 Sputcn32_3482 Shewanella putrefaciens CN-32 flagellar biosynthetic protein FliQ YP_001184991.1 4046113 D 319224 CDS YP_001184992.1 146294568 5080518 4046384..4047163 1 NC_009438.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: sdn:Sden_3666 flagellar biosynthetic protein FliR; flagellar biosynthetic protein FliR 4047163 5080518 Sputcn32_3483 Shewanella putrefaciens CN-32 flagellar biosynthetic protein FliR YP_001184992.1 4046384 D 319224 CDS YP_001184993.1 146294569 5080519 4047160..4048290 1 NC_009438.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: sdn:Sden_3667 flagellar biosynthetic protein FlhB; flagellar biosynthetic protein FlhB 4048290 5080519 Sputcn32_3484 Shewanella putrefaciens CN-32 flagellar biosynthetic protein FlhB YP_001184993.1 4047160 D 319224 CDS YP_001184994.1 146294570 5080520 4048306..4050387 1 NC_009438.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: sdn:Sden_3668 flagellar biosynthesis protein FlhA; flagellar biosynthesis protein FlhA 4050387 5080520 Sputcn32_3485 Shewanella putrefaciens CN-32 flagellar biosynthesis protein FlhA YP_001184994.1 4048306 D 319224 CDS YP_001184995.1 146294571 5080521 4050775..4051326 1 NC_009438.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: son:SO4295 NAD(P)H dehydrogenase (quinone); NAD(P)H dehydrogenase (quinone) 4051326 5080521 Sputcn32_3486 Shewanella putrefaciens CN-32 NAD(P)H dehydrogenase (quinone) YP_001184995.1 4050775 D 319224 CDS YP_001184996.1 146294572 5080522 4051323..4052528 1 NC_009438.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: son:SO4296 NupC family protein; Na+ dependent nucleoside transporter 4052528 5080522 Sputcn32_3487 Shewanella putrefaciens CN-32 Na+ dependent nucleoside transporter YP_001184996.1 4051323 D 319224 CDS YP_001184997.1 146294573 5080523 4052599..4053324 1 NC_009438.1 PFAM: purine and other phosphorylases, family 1; KEGG: son:SO4297 uridine phosphorylase, putative; purine phosphorylase family protein 1 4053324 5080523 Sputcn32_3488 Shewanella putrefaciens CN-32 purine phosphorylase family protein 1 YP_001184997.1 4052599 D 319224 CDS YP_001184998.1 146294574 5080524 4053628..4054302 1 NC_009438.1 PFAM: cyclic nucleotide-binding; KEGG: son:SO4298 cyclic nucleotide binding protein, putative; cyclic nucleotide-binding protein 4054302 5080524 Sputcn32_3489 Shewanella putrefaciens CN-32 cyclic nucleotide-binding protein YP_001184998.1 4053628 D 319224 CDS YP_001184999.1 146294575 5080526 4055780..4057111 1 NC_009438.1 PFAM: peptidase M16 domain protein; KEGG: shm:Shewmr7_3815 peptidase M16 domain protein; peptidase M16 domain-containing protein 4057111 5080526 Sputcn32_3491 Shewanella putrefaciens CN-32 peptidase M16 domain-containing protein YP_001184999.1 4055780 D 319224 CDS YP_001185000.1 146294576 5080527 4057108..4058541 1 NC_009438.1 PFAM: peptidase M16 domain protein; KEGG: shm:Shewmr7_3814 peptidase M16 domain protein; peptidase M16 domain-containing protein 4058541 5080527 Sputcn32_3492 Shewanella putrefaciens CN-32 peptidase M16 domain-containing protein YP_001185000.1 4057108 D 319224 CDS YP_001185001.1 146294577 5080528 complement(4058624..4060651) 1 NC_009438.1 PFAM: peptidase S9, prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: son:SO4537 peptidase, putative; peptidase S9 prolyl oligopeptidase 4060651 5080528 Sputcn32_3493 Shewanella putrefaciens CN-32 peptidase S9 prolyl oligopeptidase YP_001185001.1 4058624 R 319224 CDS YP_001185002.1 146294578 5080529 4060982..4061533 1 NC_009438.1 KEGG: she:Shewmr4_3739 hypothetical protein; hypothetical protein 4061533 5080529 Sputcn32_3494 Shewanella putrefaciens CN-32 hypothetical protein YP_001185002.1 4060982 D 319224 CDS YP_001185003.1 146294579 5080530 complement(4062247..4062678) 1 NC_009438.1 KEGG: she:Shewmr4_0329 hypothetical protein; hypothetical protein 4062678 5080530 Sputcn32_3495 Shewanella putrefaciens CN-32 hypothetical protein YP_001185003.1 4062247 R 319224 CDS YP_001185004.1 146294580 5080531 complement(4062816..4063241) 1 NC_009438.1 KEGG: she:Shewmr4_0915 hypothetical protein; hypothetical protein 4063241 5080531 Sputcn32_3496 Shewanella putrefaciens CN-32 hypothetical protein YP_001185004.1 4062816 R 319224 CDS YP_001185005.1 146294581 5080532 4063696..4063788 1 NC_009438.1 hypothetical protein 4063788 5080532 Sputcn32_3497 Shewanella putrefaciens CN-32 hypothetical protein YP_001185005.1 4063696 D 319224 CDS YP_001185006.1 146294582 5080533 complement(4064024..4064488) 1 NC_009438.1 TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: shm:Shewmr7_3807 RNA methyltransferase, TrmH family, group 2; RNA methyltransferase 4064488 5080533 Sputcn32_3498 Shewanella putrefaciens CN-32 RNA methyltransferase YP_001185006.1 4064024 R 319224 CDS YP_001185007.1 146294583 5080534 4064683..4065540 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: shm:Shewmr7_3806 protein of unknown function DUF6, transmembrane; hypothetical protein 4065540 5080534 Sputcn32_3499 Shewanella putrefaciens CN-32 hypothetical protein YP_001185007.1 4064683 D 319224 CDS YP_001185008.1 146294584 5080535 4065569..4066510 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_3805 transcriptional regulator, LysR family; LysR family transcriptional regulator 4066510 5080535 Sputcn32_3500 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001185008.1 4065569 D 319224 CDS YP_001185009.1 146294585 5080536 complement(4066507..4067376) 1 NC_009438.1 PFAM: Patatin; KEGG: shm:Shewmr7_3804 patatin; patatin 4067376 5080536 Sputcn32_3501 Shewanella putrefaciens CN-32 patatin YP_001185009.1 4066507 R 319224 CDS YP_001185010.1 146294586 5080537 complement(4067508..4068536) 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: son:SO4524 transcriptional regulator, LysR family; LysR family transcriptional regulator 4068536 5080537 Sputcn32_3502 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001185010.1 4067508 R 319224 CDS YP_001185011.1 146294587 5080538 4068604..4070604 1 NC_009438.1 IrgA; binds ferric enterobactin; irgA gene expression is repressed by Fur and induced by the divergently transcribed upstream gene irgB; outer membrane protein; involved in iron metabolism; enterobactin receptor protein 4070604 5080538 Sputcn32_3503 Shewanella putrefaciens CN-32 enterobactin receptor protein YP_001185011.1 4068604 D 319224 CDS YP_001185012.1 146294588 5080539 complement(4070658..4071599) 1 NC_009438.1 KEGG: son:SO4522 hypothetical protein; hypothetical protein 4071599 5080539 Sputcn32_3504 Shewanella putrefaciens CN-32 hypothetical protein YP_001185012.1 4070658 R 319224 CDS YP_001185013.1 146294589 5080540 complement(4071646..4071879) 1 NC_009438.1 KEGG: she:Shewmr4_3731 hypothetical protein; hypothetical protein 4071879 5080540 Sputcn32_3505 Shewanella putrefaciens CN-32 hypothetical protein YP_001185013.1 4071646 R 319224 CDS YP_001185014.1 146294590 5080541 complement(4071993..4073330) 1 NC_009438.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4073330 5080541 Sputcn32_3506 Shewanella putrefaciens CN-32 coproporphyrinogen III oxidase YP_001185014.1 4071993 R 319224 CDS YP_001185015.1 146294591 5080542 4073705..4074631 1 NC_009438.1 PFAM: Bile acid:sodium symporter; KEGG: shm:Shewmr7_3800 bile acid:sodium symporter; bile acid:sodium symporter 4074631 5080542 Sputcn32_3507 Shewanella putrefaciens CN-32 bile acid:sodium symporter YP_001185015.1 4073705 D 319224 CDS YP_001185016.1 146294592 5078701 4081070..4081531 1 NC_009438.1 PFAM: RNP-1 like RNA-binding protein; KEGG: shm:Shewmr7_0175 RNP-1 like RNA-binding protein; RNP-1 like RNA-binding protein 4081531 5078701 Sputcn32_3508 Shewanella putrefaciens CN-32 RNP-1 like RNA-binding protein YP_001185016.1 4081070 D 319224 CDS YP_001185017.1 146294593 5078702 complement(4081553..4082359) 1 NC_009438.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 4082359 5078702 Sputcn32_3509 Shewanella putrefaciens CN-32 glutamate racemase YP_001185017.1 4081553 R 319224 CDS YP_001185018.1 146294594 5078703 4082595..4083695 1 NC_009438.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 4083695 5078703 Sputcn32_3510 Shewanella putrefaciens CN-32 tRNA (uracil-5-)-methyltransferase YP_001185018.1 4082595 D 319224 CDS YP_001185019.1 146294595 5078704 complement(4084088..4085671) 1 NC_009438.1 KEGG: son:SO4497 ISSod5, transposase; transposase 4085671 5078704 Sputcn32_3511 Shewanella putrefaciens CN-32 transposase YP_001185019.1 4084088 R 319224 CDS YP_001185020.1 146294596 5078705 4086196..4087656 1 NC_009438.1 hypothetical protein 4087656 5078705 Sputcn32_3512 Shewanella putrefaciens CN-32 hypothetical protein YP_001185020.1 4086196 D 319224 CDS YP_001185021.1 146294597 5078706 4087970..4088638 1 NC_009438.1 KEGG: vfi:VFA0515 transposase; transposase 4088638 5078706 Sputcn32_3513 Shewanella putrefaciens CN-32 transposase YP_001185021.1 4087970 D 319224 CDS YP_001185022.1 146294598 5078707 complement(4088825..4089118) 1 NC_009438.1 PFAM: plasmid stabilization system; KEGG: son:SO1444 hypothetical protein; plasmid stabilization system protein 4089118 5078707 Sputcn32_3514 Shewanella putrefaciens CN-32 plasmid stabilization system protein YP_001185022.1 4088825 R 319224 CDS YP_001185023.1 146294599 5078708 complement(4089106..4089390) 1 NC_009438.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: shm:Shewmr7_1769 transcriptional regulator, CopG family; CopG family transcriptional regulator 4089390 5078708 Sputcn32_3515 Shewanella putrefaciens CN-32 CopG family transcriptional regulator YP_001185023.1 4089106 R 319224 CDS YP_001185024.1 146294600 5078709 complement(4089677..4090399) 1 NC_009438.1 KEGG: shm:Shewmr7_1770 retinol acyltransferase domain protein; retinol acyltransferase domain-containing protein 4090399 5078709 Sputcn32_3516 Shewanella putrefaciens CN-32 retinol acyltransferase domain-containing protein YP_001185024.1 4089677 R 319224 CDS YP_001185025.1 146294601 5078710 complement(4090545..4091111) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: ilo:IL0646 integrase/recombinase, XerC/XerD family; phage integrase family protein 4091111 5078710 Sputcn32_3517 Shewanella putrefaciens CN-32 phage integrase family protein YP_001185025.1 4090545 R 319224 CDS YP_001185026.1 146294602 5078711 complement(4091228..4091641) 1 NC_009438.1 KEGG: shm:Shewmr7_1773 hypothetical protein; hypothetical protein 4091641 5078711 Sputcn32_3518 Shewanella putrefaciens CN-32 hypothetical protein YP_001185026.1 4091228 R 319224 CDS YP_001185027.1 146294603 5078712 complement(4091846..4092220) 1 NC_009438.1 PFAM: YagBYeeUYfjZ family protein; KEGG: son:SO1453 hypothetical protein; hypothetical protein 4092220 5078712 Sputcn32_3519 Shewanella putrefaciens CN-32 hypothetical protein YP_001185027.1 4091846 R 319224 CDS YP_001185028.1 146294604 5078713 complement(4092360..4092722) 1 NC_009438.1 KEGG: she:Shewmr4_1698 hypothetical protein; hypothetical protein 4092722 5078713 Sputcn32_3520 Shewanella putrefaciens CN-32 hypothetical protein YP_001185028.1 4092360 R 319224 CDS YP_001185029.1 146294605 5078714 complement(4092763..4093269) 1 NC_009438.1 PFAM: DNA repair protein RadC; KEGG: shm:Shewmr7_1776 DNA repair protein RadC; DNA repair protein RadC 4093269 5078714 Sputcn32_3521 Shewanella putrefaciens CN-32 DNA repair protein RadC YP_001185029.1 4092763 R 319224 CDS YP_001185030.1 146294606 5078715 4093402..4093599 1 NC_009438.1 PFAM: Prophage CP4-57 regulatory; KEGG: shm:Shewmr7_1777 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 4093599 5078715 Sputcn32_3522 Shewanella putrefaciens CN-32 phage transcriptional regulator AlpA YP_001185030.1 4093402 D 319224 CDS YP_001185031.1 146294607 5078716 4094178..4097291 1 NC_009438.1 PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; KEGG: ngo:NGO0697 putative type I restriction enzyme; hypothetical protein 4097291 5078716 Sputcn32_3523 Shewanella putrefaciens CN-32 hypothetical protein YP_001185031.1 4094178 D 319224 CDS YP_001185032.1 146294608 5078717 4097340..4098989 1 NC_009438.1 PFAM: N-6 DNA methylase; KEGG: ngo:NGO0702 type I restriction enzyme M protein; N-6 DNA methylase 4098989 5078717 Sputcn32_3524 Shewanella putrefaciens CN-32 N-6 DNA methylase YP_001185032.1 4097340 D 319224 CDS YP_001185033.1 146294609 5078718 4098979..4100241 1 NC_009438.1 PFAM: restriction modification system DNA specificity domain; KEGG: mba:Mbar_A2665 type I restriction-modification system specificity subunit; restriction modification system DNA specificity subunit 4100241 5078718 Sputcn32_3525 Shewanella putrefaciens CN-32 restriction modification system DNA specificity subunit YP_001185033.1 4098979 D 319224 CDS YP_001185034.1 146294610 5078719 4100238..4100795 1 NC_009438.1 KEGG: ngo:NGO0700 hypothetical protein; hypothetical protein 4100795 5078719 Sputcn32_3526 Shewanella putrefaciens CN-32 hypothetical protein YP_001185034.1 4100238 D 319224 CDS YP_001185035.1 146294611 5078720 4100798..4101634 1 NC_009438.1 KEGG: ngo:NGO0701 hypothetical protein; hypothetical protein 4101634 5078720 Sputcn32_3527 Shewanella putrefaciens CN-32 hypothetical protein YP_001185035.1 4100798 D 319224 CDS YP_001185036.1 146294612 5078721 4101638..4102276 1 NC_009438.1 KEGG: neu:NE1363 hypothetical protein; hypothetical protein 4102276 5078721 Sputcn32_3528 Shewanella putrefaciens CN-32 hypothetical protein YP_001185036.1 4101638 D 319224 CDS YP_001185037.1 146294613 5078722 4102290..4103330 1 NC_009438.1 PFAM: Appr-1-p processing domain protein; KEGG: neu:NE1364 Appr-1-p processing enzyme family; appr-1-p processing domain-containing protein 4103330 5078722 Sputcn32_3529 Shewanella putrefaciens CN-32 appr-1-p processing domain-containing protein YP_001185037.1 4102290 D 319224 CDS YP_001185038.1 146294614 5078723 complement(4103478..4104458) 1 NC_009438.1 PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: she:Shewmr4_2154 alcohol dehydrogenase, zinc-binding domain protein; alcohol dehydrogenase 4104458 5078723 Sputcn32_3530 Shewanella putrefaciens CN-32 alcohol dehydrogenase YP_001185038.1 4103478 R 319224 CDS YP_001185039.1 146294615 5078724 complement(4104548..4105255) 1 NC_009438.1 KEGG: she:Shewmr4_2148 putative transcriptional regulator, TetR family; TetR family transcriptional regulator 4105255 5078724 Sputcn32_3531 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001185039.1 4104548 R 319224 CDS YP_001185040.1 146294616 5078725 4105327..4106193 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_2226 transcriptional regulator, LysR family; LysR family transcriptional regulator 4106193 5078725 Sputcn32_3532 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001185040.1 4105327 D 319224 CDS YP_001185041.1 146294617 5078726 complement(4106474..4107601) 1 NC_009438.1 KEGG: shm:Shewmr7_2227 hypothetical protein; hypothetical protein 4107601 5078726 Sputcn32_3533 Shewanella putrefaciens CN-32 hypothetical protein YP_001185041.1 4106474 R 319224 CDS YP_001185042.1 146294618 5078727 complement(4107695..4108939) 1 NC_009438.1 KEGG: shm:Shewmr7_2228 hypothetical protein; hypothetical protein 4108939 5078727 Sputcn32_3534 Shewanella putrefaciens CN-32 hypothetical protein YP_001185042.1 4107695 R 319224 CDS YP_001185043.1 146294619 5078728 complement(4109328..4109687) 1 NC_009438.1 KEGG: shm:Shewmr7_2229 tetraheme cytochrome c; tetraheme cytochrome c 4109687 5078728 Sputcn32_3535 Shewanella putrefaciens CN-32 tetraheme cytochrome c YP_001185043.1 4109328 R 319224 CDS YP_001185044.1 146294620 5078729 complement(4109716..4111236) 1 NC_009438.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: shm:Shewmr7_2230 flavocytochrome c; flavocytochrome c 4111236 5078729 Sputcn32_3536 Shewanella putrefaciens CN-32 flavocytochrome c YP_001185044.1 4109716 R 319224 CDS YP_001185045.1 146294621 5078730 complement(4111579..4111902) 1 NC_009438.1 KEGG: eca:ECA2856 hypothetical protein; hypothetical protein 4111902 5078730 Sputcn32_3537 Shewanella putrefaciens CN-32 hypothetical protein YP_001185045.1 4111579 R 319224 CDS YP_001185046.1 146294622 5078731 4112422..4112742 1 NC_009438.1 PFAM: helix-turn-helix domain protein; KEGG: ava:Ava_2195 transcriptional regulator, XRE family; XRE family transcriptional regulator 4112742 5078731 Sputcn32_3538 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001185046.1 4112422 D 319224 CDS YP_001185047.1 146294623 5078732 4113074..4113436 1 NC_009438.1 KEGG: vvy:VV1846 hypothetical protein; hypothetical protein 4113436 5078732 Sputcn32_3539 Shewanella putrefaciens CN-32 hypothetical protein YP_001185047.1 4113074 D 319224 CDS YP_001185048.1 146294624 5078733 complement(4113779..4115041) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: lpn:lpg1070 integrase, phage related; phage integrase family protein 4115041 5078733 Sputcn32_3540 Shewanella putrefaciens CN-32 phage integrase family protein YP_001185048.1 4113779 R 319224 CDS YP_001185049.1 146294625 5078734 complement(4115321..4115935) 1 NC_009438.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 4115935 5078734 Sputcn32_3541 Shewanella putrefaciens CN-32 DNA-binding transcriptional repressor FabR YP_001185049.1 4115321 R 319224 CDS YP_001185050.1 146294626 5078735 4116080..4117186 1 NC_009438.1 PFAM: fatty acid desaturase; KEGG: son:SO0197 fatty acid desaturase, family 1; stearoyl-CoA 9-desaturase 4117186 5078735 Sputcn32_3542 Shewanella putrefaciens CN-32 stearoyl-CoA 9-desaturase YP_001185050.1 4116080 D 319224 CDS YP_001185051.1 146294627 5078736 4117282..4118340 1 NC_009438.1 catalyzes the formation of selenophosphate from selenide and ATP; selenophosphate synthetase 4118340 5078736 Sputcn32_3543 Shewanella putrefaciens CN-32 selenophosphate synthetase YP_001185051.1 4117282 D 319224 CDS YP_001185052.1 146294628 5078737 4118340..4119449 1 NC_009438.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; tRNA 2-selenouridine synthase 4119449 5078737 Sputcn32_3544 Shewanella putrefaciens CN-32 tRNA 2-selenouridine synthase YP_001185052.1 4118340 D 319224 CDS YP_001185053.1 146294629 5078738 complement(4119504..4121366) 1 NC_009438.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0194 acyltransferase family protein; phospholipid/glycerol acyltransferase 4121366 5078738 Sputcn32_3545 Shewanella putrefaciens CN-32 phospholipid/glycerol acyltransferase YP_001185053.1 4119504 R 319224 CDS YP_001185054.1 146294630 5078739 complement(4121357..4121968) 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: she:Shewmr4_0172 transcriptional regulator, TetR family; TetR family transcriptional regulator 4121968 5078739 Sputcn32_3546 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001185054.1 4121357 R 319224 CDS YP_001185055.1 146294631 5078740 complement(4122286..4122729) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shm:Shewmr7_0166 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 4122729 5078740 Sputcn32_3547 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001185055.1 4122286 R 319224 CDS YP_001185056.1 146294632 5078741 complement(4122737..4123549) 1 NC_009438.1 TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; KEGG: shm:Shewmr7_0165 3'(2'),5'-bisphosphate nucleotidase; 3'(2'),5'-bisphosphate nucleotidase 4123549 5078741 Sputcn32_3548 Shewanella putrefaciens CN-32 3'(2'),5'-bisphosphate nucleotidase YP_001185056.1 4122737 R 319224 CDS YP_001185057.1 146294633 5078742 complement(4123621..4124172) 1 NC_009438.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 4124172 nudE 5078742 nudE Shewanella putrefaciens CN-32 ADP-ribose diphosphatase NudE YP_001185057.1 4123621 R 319224 CDS YP_001185058.1 146294634 5078743 complement(4124410..4131840) 1 NC_009438.1 PFAM: Fibronectin, type III domain protein; Ig family protein; SMART: Dystroglycan-type cadherin domain protein; KEGG: son:SO0189 fibronectin type III domain protein; fibronectin type III domain-containing protein 4131840 5078743 Sputcn32_3550 Shewanella putrefaciens CN-32 fibronectin type III domain-containing protein YP_001185058.1 4124410 R 319224 CDS YP_001185059.1 146294635 5078744 complement(4131903..4132502) 1 NC_009438.1 PFAM: phage Tail Collar domain protein; KEGG: sdn:Sden_3729 phage tail collar; phage tail collar domain-containing protein 4132502 5078744 Sputcn32_3551 Shewanella putrefaciens CN-32 phage tail collar domain-containing protein YP_001185059.1 4131903 R 319224 CDS YP_001185060.1 146294636 5078745 complement(4132728..4133225) 1 NC_009438.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hch:HCH_06057 acetyltransferase; N-acetyltransferase GCN5 4133225 5078745 Sputcn32_3552 Shewanella putrefaciens CN-32 N-acetyltransferase GCN5 YP_001185060.1 4132728 R 319224 CDS YP_001185061.1 146294637 5078746 complement(4133215..4134387) 1 NC_009438.1 KEGG: son:SO0181 hypothetical protein; hypothetical protein 4134387 5078746 Sputcn32_3553 Shewanella putrefaciens CN-32 hypothetical protein YP_001185061.1 4133215 R 319224 CDS YP_001185062.1 146294638 5078747 complement(4134387..4135469) 1 NC_009438.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: son:SO0180 hypothetical protein; phytanoyl-CoA dioxygenase 4135469 5078747 Sputcn32_3554 Shewanella putrefaciens CN-32 phytanoyl-CoA dioxygenase YP_001185062.1 4134387 R 319224 CDS YP_001185063.1 146294639 5078748 complement(4135447..4136034) 1 NC_009438.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: son:SO0179 hypothetical protein; aspartyl/asparaginyl beta-hydroxylase 4136034 5078748 Sputcn32_3555 Shewanella putrefaciens CN-32 aspartyl/asparaginyl beta-hydroxylase YP_001185063.1 4135447 R 319224 CDS YP_001185064.1 146294640 5078749 4136129..4136830 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: shm:Shewmr7_0162 HAD-superfamily hydrolase, subfamily IA, variant 3; HAD family hydrolase 4136830 5078749 Sputcn32_3556 Shewanella putrefaciens CN-32 HAD family hydrolase YP_001185064.1 4136129 D 319224 CDS YP_001185065.1 146294641 5078750 complement(4136865..4137626) 1 NC_009438.1 PFAM: type II secretion system protein N; KEGG: shm:Shewmr7_0161 type II secretion system protein N; type II secretion system protein N 4137626 5078750 Sputcn32_3557 Shewanella putrefaciens CN-32 type II secretion system protein N YP_001185065.1 4136865 R 319224 CDS YP_001185066.1 146294642 5078751 complement(4137637..4138113) 1 NC_009438.1 PFAM: General secretion pathway M protein; KEGG: son:SO0175 general secretion pathway protein M; general secretion pathway M protein 4138113 5078751 Sputcn32_3558 Shewanella putrefaciens CN-32 general secretion pathway M protein YP_001185066.1 4137637 R 319224 CDS YP_001185067.1 146294643 5078795 complement(4138115..4139302) 1 NC_009438.1 TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; KEGG: she:Shewmr4_0164 general secretion pathway protein L; general secretion pathway protein L 4139302 5078795 Sputcn32_3559 Shewanella putrefaciens CN-32 general secretion pathway protein L YP_001185067.1 4138115 R 319224 CDS YP_001185068.1 146294644 5078796 complement(4139353..4140357) 1 NC_009438.1 PFAM: General secretion pathway protein K; KEGG: she:Shewmr4_0163 general secretion pathway protein K; general secretion pathway protein K 4140357 5078796 Sputcn32_3560 Shewanella putrefaciens CN-32 general secretion pathway protein K YP_001185068.1 4139353 R 319224 CDS YP_001185069.1 146294645 5078797 complement(4140354..4141112) 1 NC_009438.1 TIGRFAM: general secretion pathway protein J; KEGG: son:SO0172 general secretion pathway protein J; general secretion pathway protein J 4141112 5078797 Sputcn32_3561 Shewanella putrefaciens CN-32 general secretion pathway protein J YP_001185069.1 4140354 R 319224 CDS YP_001185070.1 146294646 5078798 complement(4141093..4141461) 1 NC_009438.1 TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: shm:Shewmr7_0156 general secretion pathway protein I; general secretion pathway protein I 4141461 5078798 Sputcn32_3562 Shewanella putrefaciens CN-32 general secretion pathway protein I YP_001185070.1 4141093 R 319224 CDS YP_001185071.1 146294647 5078799 complement(4141448..4142020) 1 NC_009438.1 TIGRFAM: general secretion pathway protein H; KEGG: son:SO0170 general secretion pathway protein H; general secretion pathway protein H 4142020 5078799 Sputcn32_3563 Shewanella putrefaciens CN-32 general secretion pathway protein H YP_001185071.1 4141448 R 319224 CDS YP_001185072.1 146294648 5078800 complement(4142022..4142456) 1 NC_009438.1 TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: shm:Shewmr7_0154 general secretion pathway protein G; general secretion pathway protein G 4142456 5078800 Sputcn32_3564 Shewanella putrefaciens CN-32 general secretion pathway protein G YP_001185072.1 4142022 R 319224 CDS YP_001185073.1 146294649 5078801 complement(4142520..4143743) 1 NC_009438.1 TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: son:SO0168 general secretion pathway protein F; general secretion pathway protein F 4143743 5078801 Sputcn32_3565 Shewanella putrefaciens CN-32 general secretion pathway protein F YP_001185073.1 4142520 R 319224 CDS YP_001185074.1 146294650 5078802 complement(4143747..4145312) 1 NC_009438.1 KEGG: shm:Shewmr7_0152 general secretion pathway protein E; TIGRFAM: general secretion pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretion pathway protein E 4145312 5078802 Sputcn32_3566 Shewanella putrefaciens CN-32 general secretion pathway protein E YP_001185074.1 4143747 R 319224 CDS YP_001185075.1 146294651 5078803 complement(4145305..4147416) 1 NC_009438.1 TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D; general secretion pathway protein D 4147416 5078803 Sputcn32_3567 Shewanella putrefaciens CN-32 general secretion pathway protein D YP_001185075.1 4145305 R 319224 CDS YP_001185076.1 146294652 5078804 complement(4147441..4148367) 1 NC_009438.1 TIGRFAM: general secretion pathway protein C; KEGG: she:Shewmr4_0155 general secretion pathway protein C; general secretion pathway protein C 4148367 5078804 Sputcn32_3568 Shewanella putrefaciens CN-32 general secretion pathway protein C YP_001185076.1 4147441 R 319224 CDS YP_001185077.1 146294653 5078805 4148620..4149018 1 NC_009438.1 PFAM: RNA-binding S4 domain protein; KEGG: shm:Shewmr7_0149 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 4149018 5078805 Sputcn32_3569 Shewanella putrefaciens CN-32 RNA-binding S4 domain-containing protein YP_001185077.1 4148620 D 319224 CDS YP_001185078.1 146294654 5078806 4149034..4149894 1 NC_009438.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 4149894 hslO 5078806 hslO Shewanella putrefaciens CN-32 Hsp33-like chaperonin YP_001185078.1 4149034 D 319224 CDS YP_001185079.1 146294655 5078807 4150097..4151638 1 NC_009438.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 4151638 5078807 Sputcn32_3571 Shewanella putrefaciens CN-32 phosphoenolpyruvate carboxykinase YP_001185079.1 4150097 D 319224 CDS YP_001185080.1 146294656 5078808 4151839..4152390 1 NC_009438.1 KEGG: tde:TDE0520 hypothetical protein; hypothetical protein 4152390 5078808 Sputcn32_3572 Shewanella putrefaciens CN-32 hypothetical protein YP_001185080.1 4151839 D 319224 CDS YP_001185081.1 146294657 5078809 4152402..4152854 1 NC_009438.1 hypothetical protein 4152854 5078809 Sputcn32_3573 Shewanella putrefaciens CN-32 hypothetical protein YP_001185081.1 4152402 D 319224 CDS YP_001185082.1 146294658 5078810 4153019..4153906 1 NC_009438.1 KEGG: son:SOA0067 hypothetical protein; hypothetical protein 4153906 5078810 Sputcn32_3574 Shewanella putrefaciens CN-32 hypothetical protein YP_001185082.1 4153019 D 319224 CDS YP_001185083.1 146294659 5078812 4155235..4156014 1 NC_009438.1 PFAM: protein of unknown function DUF542, ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: she:Shewmr4_0398 hemerythrin HHE cation binding domain protein; hypothetical protein 4156014 5078812 Sputcn32_3576 Shewanella putrefaciens CN-32 hypothetical protein YP_001185083.1 4155235 D 319224 CDS YP_001185084.1 146294660 5078813 4156136..4156639 1 NC_009438.1 PFAM: AAA-4 family protein; KEGG: shm:Shewmr7_3628 putative transcriptional regulator; putative transcriptional regulator 4156639 5078813 Sputcn32_3577 Shewanella putrefaciens CN-32 putative transcriptional regulator YP_001185084.1 4156136 D 319224 CDS YP_001185085.1 146294661 5078814 complement(4156647..4157225) 1 NC_009438.1 PFAM: HupE/UreJ protein; KEGG: she:Shewmr4_0396 HupE/UreJ protein; HupE/UreJ protein 4157225 5078814 Sputcn32_3578 Shewanella putrefaciens CN-32 HupE/UreJ protein YP_001185085.1 4156647 R 319224 CDS YP_001185086.1 146294662 5078815 complement(4157370..4158092) 1 NC_009438.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: she:Shewmr4_0395 HAD-superfamily hydrolase, subfamily IA, variant 1; HAD family hydrolase 4158092 5078815 Sputcn32_3579 Shewanella putrefaciens CN-32 HAD family hydrolase YP_001185086.1 4157370 R 319224 CDS YP_001185087.1 146294663 5078816 complement(4158092..4159000) 1 NC_009438.1 TIGRFAM: tyrosine recombinase XerC; PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein; KEGG: son:SO4306 integrase/recombinase XerC; tyrosine recombinase XerC 4159000 5078816 Sputcn32_3580 Shewanella putrefaciens CN-32 tyrosine recombinase XerC YP_001185087.1 4158092 R 319224 CDS YP_001185088.1 146294664 5078817 complement(4159083..4159718) 1 NC_009438.1 PFAM: protein of unknown function DUF484; KEGG: shm:Shewmr7_3632 protein of unknown function DUF484; hypothetical protein 4159718 5078817 Sputcn32_3581 Shewanella putrefaciens CN-32 hypothetical protein YP_001185088.1 4159083 R 319224 CDS YP_001185089.1 146294665 5078818 complement(4159715..4160542) 1 NC_009438.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 4160542 dapF 5078818 dapF Shewanella putrefaciens CN-32 diaminopimelate epimerase YP_001185089.1 4159715 R 319224 CDS YP_001185090.1 146294666 5078819 complement(4160619..4161863) 1 NC_009438.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: shm:Shewmr7_3634 diaminopimelate decarboxylase; diaminopimelate decarboxylase 4161863 5078819 Sputcn32_3583 Shewanella putrefaciens CN-32 diaminopimelate decarboxylase YP_001185090.1 4160619 R 319224 CDS YP_001185091.1 146294667 5078820 complement(4161915..4162121) 1 NC_009438.1 KEGG: shm:Shewmr7_3635 hypothetical protein; hypothetical protein 4162121 5078820 Sputcn32_3584 Shewanella putrefaciens CN-32 hypothetical protein YP_001185091.1 4161915 R 319224 CDS YP_001185092.1 146294668 5078821 4162189..4162518 1 NC_009438.1 PFAM: Frataxin family protein; KEGG: shm:Shewmr7_3636 frataxin family protein; frataxin family protein 4162518 5078821 Sputcn32_3585 Shewanella putrefaciens CN-32 frataxin family protein YP_001185092.1 4162189 D 319224 CDS YP_001185093.1 146294669 5078822 complement(4162573..4164987) 1 NC_009438.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 4164987 cyaA 5078822 cyaA Shewanella putrefaciens CN-32 adenylate cyclase YP_001185093.1 4162573 R 319224 CDS YP_001185094.1 146294670 5078823 4165190..4166122 1 NC_009438.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 4166122 hemC 5078823 hemC Shewanella putrefaciens CN-32 porphobilinogen deaminase YP_001185094.1 4165190 D 319224 CDS YP_001185095.1 146294671 5078824 4166127..4166867 1 NC_009438.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: son:SO4314 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 4166867 5078824 Sputcn32_3588 Shewanella putrefaciens CN-32 uroporphyrinogen III synthase HEM4 YP_001185095.1 4166127 D 319224 CDS YP_001185096.1 146294672 5078825 4166928..4168127 1 NC_009438.1 PFAM: protein of unknown function DUF513, hemX; KEGG: shm:Shewmr7_3640 protein of unknown function DUF513, HemX; hypothetical protein 4168127 5078825 Sputcn32_3589 Shewanella putrefaciens CN-32 hypothetical protein YP_001185096.1 4166928 D 319224 CDS YP_001185097.1 146294673 5078826 4168124..4169290 1 NC_009438.1 PFAM: HemY domain protein; KEGG: she:Shewmr4_0385 HemY domain protein; HemY domain-containing protein 4169290 5078826 Sputcn32_3590 Shewanella putrefaciens CN-32 HemY domain-containing protein YP_001185097.1 4168124 D 319224 CDS YP_001185098.1 146294674 5078827 4169699..4182361 1 NC_009438.1 KEGG: shm:Shewmr7_3642 putative outer membrane adhesin like protein; TIGRFAM: putative outer membrane adhesin like proteiin; PFAM: Hemolysin-type calcium-binding region; TMP repeat-containing protein; SMART: Cadherin; outer membrane adhesin like protein 4182361 5078827 Sputcn32_3591 Shewanella putrefaciens CN-32 outer membrane adhesin like protein YP_001185098.1 4169699 D 319224 CDS YP_001185099.1 146294675 5078828 4182451..4184628 1 NC_009438.1 PFAM: ABC transporter, transmembrane region; ABC transporter related; peptidase C39, bacteriocin processing; SMART: AAA ATPase; KEGG: she:Shewmr4_0383 ABC transporter related; ABC transporter-like protein 4184628 5078828 Sputcn32_3592 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001185099.1 4182451 D 319224 CDS YP_001185100.1 146294676 5078829 4184625..4186007 1 NC_009438.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: shm:Shewmr7_3644 type I secretion membrane fusion protein, HlyD family; HlyD family type I secretion membrane fusion protein 4186007 5078829 Sputcn32_3593 Shewanella putrefaciens CN-32 HlyD family type I secretion membrane fusion protein YP_001185100.1 4184625 D 319224 CDS YP_001185101.1 146294677 5078830 4186034..4187449 1 NC_009438.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: shm:Shewmr7_3645 type I secretion outer membrane protein, TolC family; TolC family type I secretion outer membrane protein 4187449 5078830 Sputcn32_3594 Shewanella putrefaciens CN-32 TolC family type I secretion outer membrane protein YP_001185101.1 4186034 D 319224 CDS YP_001185102.1 146294678 5078831 4187446..4188054 1 NC_009438.1 PFAM: OmpA/MotB domain protein; KEGG: she:Shewmr4_0380 OmpA/MotB domain protein; OmpA/MotB domain-containing protein 4188054 5078831 Sputcn32_3595 Shewanella putrefaciens CN-32 OmpA/MotB domain-containing protein YP_001185102.1 4187446 D 319224 CDS YP_001185103.1 146294679 5078832 4188070..4188780 1 NC_009438.1 KEGG: shm:Shewmr7_3647 hypothetical protein; hypothetical protein 4188780 5078832 Sputcn32_3596 Shewanella putrefaciens CN-32 hypothetical protein YP_001185103.1 4188070 D 319224 CDS YP_001185104.1 146294680 5078833 4188790..4190709 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase, HAMP region domain protein; KEGG: shm:Shewmr7_3648 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 4190709 5078833 Sputcn32_3597 Shewanella putrefaciens CN-32 diguanylate cyclase/phosphodiesterase YP_001185104.1 4188790 D 319224 CDS YP_001185105.1 146294681 5078838 4191716..4194349 1 NC_009438.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; GAF domain protein; KEGG: she:Shewmr4_0377 diguanylate cyclase/phosphodiesterase with GAF sensor; GAF sensor-containing diguanylate cyclase/phosphodiesterase 4194349 5078838 Sputcn32_3598 Shewanella putrefaciens CN-32 GAF sensor-containing diguanylate cyclase/phosphodiesterase YP_001185105.1 4191716 D 319224 CDS YP_001185106.1 146294682 5078839 complement(4194386..4196398) 1 NC_009438.1 TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; KEGG: she:Shewmr4_0376 ATP-dependent DNA helicase Rep; ATP-dependent DNA helicase Rep 4196398 5078839 Sputcn32_3599 Shewanella putrefaciens CN-32 ATP-dependent DNA helicase Rep YP_001185106.1 4194386 R 319224 CDS YP_001185107.1 146294683 5078840 4196607..4196864 1 NC_009438.1 PFAM: protein of unknown function DUF526; KEGG: son:SO4329 hypothetical protein; hypothetical protein 4196864 5078840 Sputcn32_3600 Shewanella putrefaciens CN-32 hypothetical protein YP_001185107.1 4196607 D 319224 CDS YP_001185108.1 146294684 5078841 4196960..4197304 1 NC_009438.1 KEGG: shm:Shewmr7_3652 hypothetical protein; hypothetical protein 4197304 5078841 Sputcn32_3601 Shewanella putrefaciens CN-32 hypothetical protein YP_001185108.1 4196960 D 319224 CDS YP_001185109.1 146294685 5078842 4197351..4197707 1 NC_009438.1 KEGG: shm:Shewmr7_3653 hypothetical protein; hypothetical protein 4197707 5078842 Sputcn32_3602 Shewanella putrefaciens CN-32 hypothetical protein YP_001185109.1 4197351 D 319224 CDS YP_001185110.1 146294686 5078893 4197871..4199082 1 NC_009438.1 PFAM: NnrS family protein; KEGG: sfr:Sfri_3037 NnrS family protein; NnrS family protein 4199082 5078893 Sputcn32_3603 Shewanella putrefaciens CN-32 NnrS family protein YP_001185110.1 4197871 D 319224 CDS YP_001185111.1 146294687 5078894 4199066..4200475 1 NC_009438.1 PFAM: cytochrome c552; KEGG: sfr:Sfri_3036 nitrite reductase (cytochrome; ammonia-forming); nitrite reductase 4200475 5078894 Sputcn32_3604 Shewanella putrefaciens CN-32 nitrite reductase YP_001185111.1 4199066 D 319224 CDS YP_001185112.1 146294688 5078895 4200927..4202411 1 NC_009438.1 PFAM: Inner membrane CreD family protein; KEGG: shm:Shewmr7_3656 inner membrane CreD family protein; hypothetical protein 4202411 5078895 Sputcn32_3605 Shewanella putrefaciens CN-32 hypothetical protein YP_001185112.1 4200927 D 319224 CDS YP_001185113.1 146294689 5078896 4202505..4203314 1 NC_009438.1 PFAM: phosphoesterase, PA-phosphatase related; KEGG: shm:Shewmr7_3657 phosphoesterase, PA-phosphatase related; PA-phosphatase-like phosphoesterase 4203314 5078896 Sputcn32_3606 Shewanella putrefaciens CN-32 PA-phosphatase-like phosphoesterase YP_001185113.1 4202505 D 319224 CDS YP_001185114.1 146294690 5078897 complement(4203508..4204383) 1 NC_009438.1 PFAM: import inner membrane translocase, subunit Tim44; KEGG: son:SO4340 hypothetical protein; import inner membrane translocase subunit Tim44 4204383 5078897 Sputcn32_3607 Shewanella putrefaciens CN-32 import inner membrane translocase subunit Tim44 YP_001185114.1 4203508 R 319224 CDS YP_001185115.1 146294691 5078898 complement(4204831..4205349) 1 NC_009438.1 KEGG: bur:Bcep18194_B1335 hypothetical protein; hypothetical protein 4205349 5078898 Sputcn32_3608 Shewanella putrefaciens CN-32 hypothetical protein YP_001185115.1 4204831 R 319224 CDS YP_001185116.1 146294692 5078899 complement(4205397..4206017) 1 NC_009438.1 hypothetical protein 4206017 5078899 Sputcn32_3609 Shewanella putrefaciens CN-32 hypothetical protein YP_001185116.1 4205397 R 319224 CDS YP_001185117.1 146294693 5078900 complement(4206204..4207337) 1 NC_009438.1 PFAM: aminotransferase, class V; KEGG: son:SO4343 aminotransferase, class V; alanine--glyoxylate transaminase 4207337 5078900 Sputcn32_3610 Shewanella putrefaciens CN-32 alanine--glyoxylate transaminase YP_001185117.1 4206204 R 319224 CDS YP_001185118.1 146294694 5078901 complement(4207585..4209195) 1 NC_009438.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 4209195 5078901 Sputcn32_3611 Shewanella putrefaciens CN-32 threonine dehydratase YP_001185118.1 4207585 R 319224 CDS YP_001185119.1 146294695 5078902 complement(4209198..4211057) 1 NC_009438.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4211057 5078902 Sputcn32_3612 Shewanella putrefaciens CN-32 dihydroxy-acid dehydratase YP_001185119.1 4209198 R 319224 CDS YP_001185120.1 146294696 5078903 complement(4211115..4211372) 1 NC_009438.1 PFAM: amino acid-binding ACT domain protein; KEGG: shm:Shewmr7_3663 acetolactate synthase small subunit; acetolactate synthase 2 regulatory subunit 4211372 ilvM 5078903 ilvM Shewanella putrefaciens CN-32 acetolactate synthase 2 regulatory subunit YP_001185120.1 4211115 R 319224 CDS YP_001185121.1 146294697 5078904 complement(4211369..4213042) 1 NC_009438.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 4213042 5078904 Sputcn32_3614 Shewanella putrefaciens CN-32 acetolactate synthase 2 catalytic subunit YP_001185121.1 4211369 R 319224 CDS YP_001185122.1 146294698 5078905 complement(4213654..4215132) 1 NC_009438.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 4215132 5078905 Sputcn32_3615 Shewanella putrefaciens CN-32 ketol-acid reductoisomerase YP_001185122.1 4213654 R 319224 CDS YP_001185123.1 146294699 5078906 4215366..4216238 1 NC_009438.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 4216238 5078906 Sputcn32_3616 Shewanella putrefaciens CN-32 DNA-binding transcriptional regulator IlvY YP_001185123.1 4215366 D 319224 CDS YP_001185124.1 146294700 5078907 complement(4216235..4217551) 1 NC_009438.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: shm:Shewmr7_3667 protein of unknown function DUF21; hypothetical protein 4217551 5078907 Sputcn32_3617 Shewanella putrefaciens CN-32 hypothetical protein YP_001185124.1 4216235 R 319224 CDS YP_001185125.1 146294701 5078908 complement(4218089..4218556) 1 NC_009438.1 PFAM: protein of unknown function UPF0153; KEGG: she:Shewmr4_0357 protein of unknown function UPF0153; hypothetical protein 4218556 5078908 Sputcn32_3618 Shewanella putrefaciens CN-32 hypothetical protein YP_001185125.1 4218089 R 319224 CDS YP_001185126.1 146294702 5078909 4218680..4219318 1 NC_009438.1 PFAM: ERCC4 domain protein; KEGG: sdn:Sden_0291 ERCC4; ERCC4 domain-containing protein 4219318 5078909 Sputcn32_3619 Shewanella putrefaciens CN-32 ERCC4 domain-containing protein YP_001185126.1 4218680 D 319224 CDS YP_001185127.1 146294703 5078910 complement(4219347..4220030) 1 NC_009438.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; nucleotidase 4220030 5078910 Sputcn32_3620 Shewanella putrefaciens CN-32 nucleotidase YP_001185127.1 4219347 R 319224 CDS YP_001185128.1 146294704 5078911 4220333..4221229 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_0340 transcriptional regulator, LysR family; LysR family transcriptional regulator 4221229 5078911 Sputcn32_3621 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001185128.1 4220333 D 319224 CDS YP_001185129.1 146294705 5078912 4221333..4221809 1 NC_009438.1 KEGG: shm:Shewmr7_0339 hypothetical protein; hypothetical protein 4221809 5078912 Sputcn32_3622 Shewanella putrefaciens CN-32 hypothetical protein YP_001185129.1 4221333 D 319224 CDS YP_001185130.1 146294706 5078913 complement(4221845..4223800) 1 NC_009438.1 KEGG: shm:Shewmr7_0338 hypothetical protein; hypothetical protein 4223800 5078913 Sputcn32_3623 Shewanella putrefaciens CN-32 hypothetical protein YP_001185130.1 4221845 R 319224 CDS YP_001185131.1 146294707 5078914 complement(4223800..4224027) 1 NC_009438.1 PFAM: helix-turn-helix domain protein; KEGG: shm:Shewmr7_0337 transcriptional regulator, XRE family; XRE family transcriptional regulator 4224027 5078914 Sputcn32_3624 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001185131.1 4223800 R 319224 CDS YP_001185132.1 146294708 5078915 complement(4224187..4225302) 1 NC_009438.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: shm:Shewmr7_0336 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 4225302 5078915 Sputcn32_3625 Shewanella putrefaciens CN-32 filamentation induced by cAMP protein fic YP_001185132.1 4224187 R 319224 CDS YP_001185133.1 146294709 5078916 4225615..4226448 1 NC_009438.1 KEGG: son:SO0366 hypothetical protein; hypothetical protein 4226448 5078916 Sputcn32_3626 Shewanella putrefaciens CN-32 hypothetical protein YP_001185133.1 4225615 D 319224 CDS YP_001185134.1 146294710 5078917 complement(4226466..4227563) 1 NC_009438.1 PFAM: aminoglycoside phosphotransferase; KEGG: shm:Shewmr7_0333 aminoglycoside phosphotransferase; aminoglycoside phosphotransferase 4227563 5078917 Sputcn32_3627 Shewanella putrefaciens CN-32 aminoglycoside phosphotransferase YP_001185134.1 4226466 R 319224 CDS YP_001185135.1 146294711 5078918 complement(4227556..4228428) 1 NC_009438.1 KEGG: she:Shewmr4_3611 hypothetical protein; hypothetical protein 4228428 5078918 Sputcn32_3628 Shewanella putrefaciens CN-32 hypothetical protein YP_001185135.1 4227556 R 319224 CDS YP_001185136.1 146294712 5078919 complement(4228630..4230159) 1 NC_009438.1 KEGG: shm:Shewmr7_0331 hypothetical protein; hypothetical protein 4230159 5078919 Sputcn32_3629 Shewanella putrefaciens CN-32 hypothetical protein YP_001185136.1 4228630 R 319224 CDS YP_001185137.1 146294713 5078920 4230362..4231036 1 NC_009438.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 4231036 gmk 5078920 gmk Shewanella putrefaciens CN-32 guanylate kinase YP_001185137.1 4230362 D 319224 CDS YP_001185138.1 146294714 5078921 4231095..4231373 1 NC_009438.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 4231373 rpoZ 5078921 rpoZ Shewanella putrefaciens CN-32 DNA-directed RNA polymerase subunit omega YP_001185138.1 4231095 D 319224 CDS YP_001185139.1 146294715 5078922 4231419..4233524 1 NC_009438.1 KEGG: son:SO0359 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase, HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase, HD region; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 4233524 5078922 Sputcn32_3632 Shewanella putrefaciens CN-32 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_001185139.1 4231419 D 319224 CDS YP_001185140.1 146294716 5078923 4233550..4233933 1 NC_009438.1 TIGRFAM: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: son:SO0358 endoribonuclease L-PSP, putative; putative endoribonuclease L-PSP 4233933 5078923 Sputcn32_3633 Shewanella putrefaciens CN-32 putative endoribonuclease L-PSP YP_001185140.1 4233550 D 319224 CDS YP_001185141.1 146294717 5078924 4234173..4235837 1 NC_009438.1 PFAM: AMP-dependent synthetase and ligase; KEGG: son:SO0355 AMP-binding protein; AMP-dependent synthetase and ligase 4235837 5078924 Sputcn32_3634 Shewanella putrefaciens CN-32 AMP-dependent synthetase and ligase YP_001185141.1 4234173 D 319224 CDS YP_001185142.1 146294718 5078925 4236017..4236967 1 NC_009438.1 TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; KEGG: shm:Shewmr7_0325 Na+/Ca+ antiporter, CaCA family; CaCA family Na(+)/Ca(+) antiporter 4236967 5078925 Sputcn32_3635 Shewanella putrefaciens CN-32 CaCA family Na(+)/Ca(+) antiporter YP_001185142.1 4236017 D 319224 CDS YP_001185143.1 146294719 5078926 4237309..4239723 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: hne:HNE_1653 TonB-dependent receptor; TonB-dependent receptor 4239723 5078926 Sputcn32_3636 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001185143.1 4237309 D 319224 CDS YP_001185144.1 146294720 5078927 complement(4240084..4241208) 1 NC_009438.1 KEGG: shm:Shewmr7_0321 hypothetical protein; hypothetical protein 4241208 5078927 Sputcn32_3637 Shewanella putrefaciens CN-32 hypothetical protein YP_001185144.1 4240084 R 319224 CDS YP_001185145.1 146294721 5078928 4241472..4241993 1 NC_009438.1 PFAM: superoxide dismutase, copper/zinc binding; KEGG: vch:VC1583 superoxide dismutase, Cu-Zn; superoxide dismutase, copper/zinc binding 4241993 5078928 Sputcn32_3638 Shewanella putrefaciens CN-32 superoxide dismutase, copper/zinc binding YP_001185145.1 4241472 D 319224 CDS YP_001185146.1 146294722 5078929 4242153..4243682 1 NC_009438.1 KEGG: son:SO0349 magnesium chelatase family protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase, ChlI subunit; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; Mg chelatase subunit ChlI 4243682 5078929 Sputcn32_3639 Shewanella putrefaciens CN-32 Mg chelatase subunit ChlI YP_001185146.1 4242153 D 319224 CDS YP_001185147.1 146294723 5078930 4243784..4244680 1 NC_009438.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: son:SO0348 acyltransferase family protein; putative acyltransferase 4244680 5078930 Sputcn32_3640 Shewanella putrefaciens CN-32 putative acyltransferase YP_001185147.1 4243784 D 319224 CDS YP_001185148.1 146294724 5078931 4244694..4245638 1 NC_009438.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: she:Shewmr4_3626 phospholipid/glycerol acyltransferase; putative acyltransferase 4245638 5078931 Sputcn32_3641 Shewanella putrefaciens CN-32 putative acyltransferase YP_001185148.1 4244694 D 319224 CDS YP_001185149.1 146294725 5078932 complement(4245635..4246141) 1 NC_009438.1 PFAM: protein of unknown function DUF523; KEGG: she:Shewmr4_3627 protein of unknown function DUF523; hypothetical protein 4246141 5078932 Sputcn32_3642 Shewanella putrefaciens CN-32 hypothetical protein YP_001185149.1 4245635 R 319224 CDS YP_001185150.1 146294726 5078933 4246442..4247209 1 NC_009438.1 PFAM: regulatory protein GntR, HTH; GntR domain protein; KEGG: shm:Shewmr7_0316 transcriptional regulator, GntR family; GntR family transcriptional regulator 4247209 5078933 Sputcn32_3643 Shewanella putrefaciens CN-32 GntR family transcriptional regulator YP_001185150.1 4246442 D 319224 CDS YP_001185151.1 146294727 5078934 4247262..4248140 1 NC_009438.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 4248140 prpB 5078934 prpB Shewanella putrefaciens CN-32 2-methylisocitrate lyase YP_001185151.1 4247262 D 319224 CDS YP_001185152.1 146294728 5078935 4248305..4249432 1 NC_009438.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase 4249432 5078935 Sputcn32_3645 Shewanella putrefaciens CN-32 methylcitrate synthase YP_001185152.1 4248305 D 319224 CDS YP_001185153.1 146294729 5078936 4249501..4252116 1 NC_009438.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 4252116 5078936 Sputcn32_3646 Shewanella putrefaciens CN-32 aconitate hydratase YP_001185153.1 4249501 D 319224 CDS YP_001185154.1 146294730 5078937 4252210..4253403 1 NC_009438.1 TIGRFAM: putative AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: shm:Shewmr7_0312 putative AcnD-accessory protein PrpF; putative AcnD-accessory protein PrpF 4253403 5078937 Sputcn32_3647 Shewanella putrefaciens CN-32 putative AcnD-accessory protein PrpF YP_001185154.1 4252210 D 319224 CDS YP_001185155.1 146294731 5078938 4253654..4258189 1 NC_009438.1 KEGG: shm:Shewmr7_0311 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Two component regulator propeller; Two component regulator three Y domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4258189 5078938 Sputcn32_3648 Shewanella putrefaciens CN-32 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001185155.1 4253654 D 319224 CDS YP_001185156.1 146294732 5078939 complement(4258248..4259339) 1 NC_009438.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4259339 5078939 Sputcn32_3649 Shewanella putrefaciens CN-32 branched-chain amino acid aminotransferase YP_001185156.1 4258248 R 319224 CDS YP_001185157.1 146294733 5078940 4259466..4259738 1 NC_009438.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: shm:Shewmr7_0308 transcriptional antiterminator, Rof; transcriptional antiterminator Rof 4259738 5078940 Sputcn32_3650 Shewanella putrefaciens CN-32 transcriptional antiterminator Rof YP_001185157.1 4259466 D 319224 CDS YP_001185158.1 146294734 5078941 4259752..4260093 1 NC_009438.1 KEGG: son:SO0338 hypothetical protein; hypothetical protein 4260093 5078941 Sputcn32_3651 Shewanella putrefaciens CN-32 hypothetical protein YP_001185158.1 4259752 D 319224 CDS YP_001185159.1 146294735 5078942 complement(4260219..4260572) 1 NC_009438.1 PFAM: Endoribonuclease L-PSP; KEGG: son:SO0337 hypothetical translation initiation inhibitor, YjgF family; endoribonuclease L-PSP 4260572 5078942 Sputcn32_3652 Shewanella putrefaciens CN-32 endoribonuclease L-PSP YP_001185159.1 4260219 R 319224 CDS YP_001185160.1 146294736 5078943 complement(4260637..4262166) 1 NC_009438.1 PFAM: Na+/H+ antiporter NhaC; KEGG: she:Shewmr4_3639 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 4262166 5078943 Sputcn32_3653 Shewanella putrefaciens CN-32 Na+/H+ antiporter NhaC YP_001185160.1 4260637 R 319224 CDS YP_001185161.1 146294737 5078987 4262346..4262567 1 NC_009438.1 PFAM: protein of unknown function DUF904; KEGG: shm:Shewmr7_0304 protein of unknown function DUF904; hypothetical protein 4262567 5078987 Sputcn32_3654 Shewanella putrefaciens CN-32 hypothetical protein YP_001185161.1 4262346 D 319224 CDS YP_001185162.1 146294738 5078988 complement(4262564..4262776) 1 NC_009438.1 PFAM: protein of unknown function DUF1107; KEGG: son:SO0334 hypothetical protein; hypothetical protein 4262776 5078988 Sputcn32_3655 Shewanella putrefaciens CN-32 hypothetical protein YP_001185162.1 4262564 R 319224 CDS YP_001185163.1 146294739 5078989 complement(4263245..4263853) 1 NC_009438.1 PFAM: DSBA oxidoreductase; KEGG: son:SO0333 thiol:disulfide interchange protein DsbA; DSBA oxidoreductase 4263853 5078989 Sputcn32_3656 Shewanella putrefaciens CN-32 DSBA oxidoreductase YP_001185163.1 4263245 R 319224 CDS YP_001185164.1 146294740 5078990 complement(4263978..4265015) 1 NC_009438.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 4265015 5078990 Sputcn32_3657 Shewanella putrefaciens CN-32 serine/threonine protein kinase YP_001185164.1 4263978 R 319224 CDS YP_001185165.1 146294741 5078991 complement(4265026..4265349) 1 NC_009438.1 KEGG: she:Shewmr4_3644 hypothetical protein; hypothetical protein 4265349 5078991 Sputcn32_3658 Shewanella putrefaciens CN-32 hypothetical protein YP_001185165.1 4265026 R 319224 CDS YP_001185166.1 146294742 5078992 complement(4265363..4266817) 1 NC_009438.1 PFAM: protein of unknown function UPF0061; KEGG: she:Shewmr4_3645 protein of unknown function UPF0061; hypothetical protein 4266817 5078992 Sputcn32_3659 Shewanella putrefaciens CN-32 hypothetical protein YP_001185166.1 4265363 R 319224 CDS YP_001185167.1 146294743 5078993 complement(4266828..4267121) 1 NC_009438.1 KEGG: shm:Shewmr7_0298 hypothetical protein; hypothetical protein 4267121 5078993 Sputcn32_3660 Shewanella putrefaciens CN-32 hypothetical protein YP_001185167.1 4266828 R 319224 CDS YP_001185168.1 146294744 5078994 complement(4267248..4268129) 1 NC_009438.1 KEGG: shm:Shewmr7_0297 hypothetical protein; hypothetical protein 4268129 5078994 Sputcn32_3661 Shewanella putrefaciens CN-32 hypothetical protein YP_001185168.1 4267248 R 319224 CDS YP_001185169.1 146294745 5078995 4268401..4268760 1 NC_009438.1 PFAM: DsrE family protein; KEGG: shm:Shewmr7_0296 DsrE family protein; DsrE family protein 4268760 5078995 Sputcn32_3662 Shewanella putrefaciens CN-32 DsrE family protein YP_001185169.1 4268401 D 319224 CDS YP_001185170.1 146294746 5078996 4268899..4269300 1 NC_009438.1 KEGG: shm:Shewmr7_0295 hypothetical protein; hypothetical protein 4269300 5078996 Sputcn32_3663 Shewanella putrefaciens CN-32 hypothetical protein YP_001185170.1 4268899 D 319224 CDS YP_001185171.1 146294747 5078997 4269355..4270284 1 NC_009438.1 KEGG: she:Shewmr4_3650 hypothetical protein; hypothetical protein 4270284 5078997 Sputcn32_3664 Shewanella putrefaciens CN-32 hypothetical protein YP_001185171.1 4269355 D 319224 CDS YP_001185172.1 146294748 5078998 4270435..4271019 1 NC_009438.1 KEGG: shm:Shewmr7_0293 hypothetical protein; hypothetical protein 4271019 5078998 Sputcn32_3665 Shewanella putrefaciens CN-32 hypothetical protein YP_001185172.1 4270435 D 319224 CDS YP_001185173.1 146294749 5078999 complement(4271126..4272127) 1 NC_009438.1 PFAM: periplasmic binding protein; KEGG: ppu:PP_2591 ferric siderophore ABC transporter, periplasmic siderophore-binding protein; periplasmic binding protein 4272127 5078999 Sputcn32_3666 Shewanella putrefaciens CN-32 periplasmic binding protein YP_001185173.1 4271126 R 319224 CDS YP_001185174.1 146294750 5079000 complement(4272124..4272906) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pen:PSEEN2494 ferric siderophore ABC transporter, ATP-binding protein BauE; ABC transporter-like protein 4272906 5079000 Sputcn32_3667 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001185174.1 4272124 R 319224 CDS YP_001185175.1 146294751 5079001 complement(4272903..4273808) 1 NC_009438.1 PFAM: transport system permease protein; KEGG: pen:PSEEN2495 ferric siderophore ABC transporter, permease protein BauC; transport system permease 4273808 5079001 Sputcn32_3668 Shewanella putrefaciens CN-32 transport system permease YP_001185175.1 4272903 R 319224 CDS YP_001185176.1 146294752 5079002 complement(4273850..4274791) 1 NC_009438.1 PFAM: transport system permease protein; ABC-3 protein; KEGG: ppu:PP_2594 ferric siderophore ABC transporter, permease protein; transport system permease 4274791 5079002 Sputcn32_3669 Shewanella putrefaciens CN-32 transport system permease YP_001185176.1 4273850 R 319224 CDS YP_001185177.1 146294753 5079003 complement(4274864..4275574) 1 NC_009438.1 KEGG: rha:RHA1_ro03859 probable tetracycline repressor; hypothetical protein 4275574 5079003 Sputcn32_3670 Shewanella putrefaciens CN-32 hypothetical protein YP_001185177.1 4274864 R 319224 CDS YP_001185178.1 146294754 5079004 complement(4275667..4277784) 1 NC_009438.1 PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: rru:Rru_A2312 TonB-dependent receptor; TonB-dependent receptor 4277784 5079004 Sputcn32_3671 Shewanella putrefaciens CN-32 TonB-dependent receptor YP_001185178.1 4275667 R 319224 CDS YP_001185179.1 146294755 5079005 4278104..4279705 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bur:Bcep18194_B0675 ABC efflux pump, fused inner membrane and ATPase subunits; ABC transporter-like protein 4279705 5079005 Sputcn32_3672 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001185179.1 4278104 D 319224 CDS YP_001185180.1 146294756 5079006 4279702..4281261 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nfa:nfa28020 putative ABC transporter; ABC transporter-like protein 4281261 5079006 Sputcn32_3673 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001185180.1 4279702 D 319224 CDS YP_001185181.1 146294757 5079007 complement(4281427..4282017) 1 NC_009438.1 KEGG: shm:Shewmr7_0292 hypothetical protein; hypothetical protein 4282017 5079007 Sputcn32_3674 Shewanella putrefaciens CN-32 hypothetical protein YP_001185181.1 4281427 R 319224 CDS YP_001185182.1 146294758 5079008 complement(4282100..4283137) 1 NC_009438.1 PFAM: acyltransferase 3; KEGG: she:Shewmr4_3653 acyltransferase 3; acyltransferase 3 4283137 5079008 Sputcn32_3675 Shewanella putrefaciens CN-32 acyltransferase 3 YP_001185182.1 4282100 R 319224 CDS YP_001185183.1 146294759 5079009 complement(4283140..4284555) 1 NC_009438.1 KEGG: she:Shewmr4_3654 hypothetical protein; hypothetical protein 4284555 5079009 Sputcn32_3676 Shewanella putrefaciens CN-32 hypothetical protein YP_001185183.1 4283140 R 319224 CDS YP_001185184.1 146294760 5079010 complement(4284726..4285076) 1 NC_009438.1 PFAM: protein of unknown function DUF1232; KEGG: she:Shewmr4_3655 protein of unknown function DUF1232; hypothetical protein 4285076 5079010 Sputcn32_3677 Shewanella putrefaciens CN-32 hypothetical protein YP_001185184.1 4284726 R 319224 CDS YP_001185185.1 146294761 5079011 4285679..4285783 1 NC_009438.1 KEGG: shm:Shewmr7_0279 hypothetical protein; hypothetical protein 4285783 5079011 Sputcn32_3678 Shewanella putrefaciens CN-32 hypothetical protein YP_001185185.1 4285679 D 319224 CDS YP_001185186.1 146294762 5079012 4286108..4288270 1 NC_009438.1 PFAM: Orn/Lys/Arg decarboxylase, major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: she:Shewmr4_3667 ornithine decarboxylase; ornithine decarboxylase 4288270 5079012 Sputcn32_3679 Shewanella putrefaciens CN-32 ornithine decarboxylase YP_001185186.1 4286108 D 319224 CDS YP_001185187.1 146294763 5079013 4288355..4289674 1 NC_009438.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; putrescine transporter 4289674 potE 5079013 potE Shewanella putrefaciens CN-32 putrescine transporter YP_001185187.1 4288355 D 319224 CDS YP_001185188.1 146294764 5079014 4289799..4290953 1 NC_009438.1 PFAM: porin, Gram-negative type; KEGG: she:Shewmr4_3669 porin, gram-negative type; porin 4290953 5079014 Sputcn32_3681 Shewanella putrefaciens CN-32 porin YP_001185188.1 4289799 D 319224 CDS YP_001185189.1 146294765 5079015 complement(4291198..4293570) 1 NC_009438.1 PFAM: Radical SAM domain protein; Radical SAM N-terminal domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: son:SO0311 hypothetical Fe-S oxidoreductase; hypothetical protein 4293570 5079015 Sputcn32_3682 Shewanella putrefaciens CN-32 hypothetical protein YP_001185189.1 4291198 R 319224 CDS YP_001185190.1 146294766 5079016 complement(4293772..4294182) 1 NC_009438.1 KEGG: shm:Shewmr7_0274 hypothetical protein; hypothetical protein 4294182 5079016 Sputcn32_3683 Shewanella putrefaciens CN-32 hypothetical protein YP_001185190.1 4293772 R 319224 CDS YP_001185191.1 146294767 5079017 4294341..4295561 1 NC_009438.1 PFAM: protein of unknown function DUF1212; KEGG: son:SO0308 hypothetical protein; hypothetical protein 4295561 5079017 Sputcn32_3684 Shewanella putrefaciens CN-32 hypothetical protein YP_001185191.1 4294341 D 319224 CDS YP_001185192.1 146294768 5079018 4295739..4297388 1 NC_009438.1 KEGG: she:Shewmr4_3673 hypothetical protein; hypothetical protein 4297388 5079018 Sputcn32_3685 Shewanella putrefaciens CN-32 hypothetical protein YP_001185192.1 4295739 D 319224 CDS YP_001185193.1 146294769 5079019 complement(4297420..4298139) 1 NC_009438.1 PFAM: ThiJ/PfpI domain protein; KEGG: lbl:LBL_2610 transcriptional regulator, ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 4298139 5079019 Sputcn32_3686 Shewanella putrefaciens CN-32 ThiJ/PfpI domain-containing protein YP_001185193.1 4297420 R 319224 CDS YP_001185194.1 146294770 5079020 4298383..4298994 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: btk:BT9727_2867 transcriptional regulator, TetR family; TetR family transcriptional regulator 4298994 5079020 Sputcn32_3687 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001185194.1 4298383 D 319224 CDS YP_001185195.1 146294771 5079021 complement(4299033..4299287) 1 NC_009438.1 KEGG: sdn:Sden_0547 hypothetical protein; hypothetical protein 4299287 5079021 Sputcn32_3688 Shewanella putrefaciens CN-32 hypothetical protein YP_001185195.1 4299033 R 319224 CDS YP_001185196.1 146294772 5079022 complement(4299299..4299802) 1 NC_009438.1 KEGG: sdn:Sden_0546 putative orphan protein; hypothetical protein 4299802 5079022 Sputcn32_3689 Shewanella putrefaciens CN-32 hypothetical protein YP_001185196.1 4299299 R 319224 CDS YP_001185197.1 146294773 5079023 complement(4299812..4300135) 1 NC_009438.1 KEGG: sdn:Sden_0545 hypothetical protein; hypothetical protein 4300135 5079023 Sputcn32_3690 Shewanella putrefaciens CN-32 hypothetical protein YP_001185197.1 4299812 R 319224 CDS YP_001185198.1 146294774 5079025 complement(4300925..4301767) 1 NC_009438.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: she:Shewmr4_3683 protein of unknown function UPF0011; uroporphyrin-III C/tetrapyrrole methyltransferase 4301767 5079025 Sputcn32_3691 Shewanella putrefaciens CN-32 uroporphyrin-III C/tetrapyrrole methyltransferase YP_001185198.1 4300925 R 319224 CDS YP_001185199.1 146294775 5079026 4301856..4303706 1 NC_009438.1 PFAM: LppC family lipoprotein; KEGG: she:Shewmr4_3684 LppC family lipoprotein; LppC family lipoprotein 4303706 5079026 Sputcn32_3692 Shewanella putrefaciens CN-32 LppC family lipoprotein YP_001185199.1 4301856 D 319224 CDS YP_001185200.1 146294776 5079027 4303703..4304029 1 NC_009438.1 PFAM: protein of unknown function UPF0102; KEGG: shm:Shewmr7_0260 protein of unknown function UPF0102; hypothetical protein 4304029 5079027 Sputcn32_3693 Shewanella putrefaciens CN-32 hypothetical protein YP_001185200.1 4303703 D 319224 CDS YP_001185201.1 146294777 5079028 4304122..4304715 1 NC_009438.1 TIGRFAM: phosphoheptose isomerase; KEGG: shm:Shewmr7_0259 phosphoheptose isomerase; phosphoheptose isomerase 4304715 5079028 Sputcn32_3694 Shewanella putrefaciens CN-32 phosphoheptose isomerase YP_001185201.1 4304122 D 319224 CDS YP_001185202.1 146294778 5079029 4304712..4305278 1 NC_009438.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region, bacteria; KEGG: shm:Shewmr7_0258 transport-associated; transport-associated 4305278 5079029 Sputcn32_3695 Shewanella putrefaciens CN-32 transport-associated YP_001185202.1 4304712 D 319224 CDS YP_001185203.1 146294779 5079030 complement(4305299..4306222) 1 NC_009438.1 PFAM: protein of unknown function DUF6, transmembrane; KEGG: shm:Shewmr7_0257 protein of unknown function DUF6, transmembrane; hypothetical protein 4306222 5079030 Sputcn32_3696 Shewanella putrefaciens CN-32 hypothetical protein YP_001185203.1 4305299 R 319224 CDS YP_001185204.1 146294780 5079031 4306342..4307214 1 NC_009438.1 PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: shm:Shewmr7_0256 transcriptional regulator, LysR family; LysR family transcriptional regulator 4307214 5079031 Sputcn32_3697 Shewanella putrefaciens CN-32 LysR family transcriptional regulator YP_001185204.1 4306342 D 319224 CDS YP_001185205.1 146294781 5079032 complement(4307284..4308282) 1 NC_009438.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 4308282 5079032 Sputcn32_3698 Shewanella putrefaciens CN-32 tryptophanyl-tRNA synthetase YP_001185205.1 4307284 R 319224 CDS YP_001185206.1 146294782 5079033 complement(4308327..4309007) 1 NC_009438.1 TIGRFAM: phosphoglycolate phosphatase ; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: shm:Shewmr7_0254 phosphoglycolate phosphatase; phosphoglycolate phosphatase 4309007 5079033 Sputcn32_3699 Shewanella putrefaciens CN-32 phosphoglycolate phosphatase YP_001185206.1 4308327 R 319224 CDS YP_001185207.1 146294783 5079034 complement(4309012..4309722) 1 NC_009438.1 PFAM: ribulose-phosphate 3-epimerase; Orotidine 5'-phosphate decarboxylase; KEGG: shm:Shewmr7_0253 ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 4309722 5079034 Sputcn32_3700 Shewanella putrefaciens CN-32 ribulose-phosphate 3-epimerase YP_001185207.1 4309012 R 319224 CDS YP_001185208.1 146294784 5079035 4309952..4310317 1 NC_009438.1 KEGG: shm:Shewmr7_0252 hypothetical protein; hypothetical protein 4310317 5079035 Sputcn32_3701 Shewanella putrefaciens CN-32 hypothetical protein YP_001185208.1 4309952 D 319224 CDS YP_001185209.1 146294785 5079036 4310317..4310502 1 NC_009438.1 KEGG: son:SO0290 hypothetical protein; hypothetical protein 4310502 5079036 Sputcn32_3702 Shewanella putrefaciens CN-32 hypothetical protein YP_001185209.1 4310317 D 319224 CDS YP_001185210.1 146294786 5079037 complement(4310520..4311359) 1 NC_009438.1 KEGG: she:Shewmr4_3695 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 4311359 5079037 Sputcn32_3703 Shewanella putrefaciens CN-32 DNA adenine methylase YP_001185210.1 4310520 R 319224 CDS YP_001185211.1 146294787 5079088 complement(4311408..4312799) 1 NC_009438.1 PFAM: Sporulation domain protein; KEGG: son:SO0288 DamX domain protein; sporulation domain-containing protein 4312799 5079088 Sputcn32_3704 Shewanella putrefaciens CN-32 sporulation domain-containing protein YP_001185211.1 4311408 R 319224 CDS YP_001185212.1 146294788 5079089 complement(4312818..4313897) 1 NC_009438.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 4313897 aroB 5079089 aroB Shewanella putrefaciens CN-32 3-dehydroquinate synthase YP_001185212.1 4312818 R 319224 CDS YP_001185213.1 146294789 5079090 complement(4313903..4314418) 1 NC_009438.1 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 4314418 aroK 5079090 aroK Shewanella putrefaciens CN-32 shikimate kinase I YP_001185213.1 4313903 R 319224 CDS YP_001185214.1 146294790 5079091 complement(4314635..4316686) 1 NC_009438.1 TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB, short N-terminal domain; KEGG: she:Shewmr4_3699 type IV pilus secretin PilQ; type IV pilus secretin PilQ 4316686 5079091 Sputcn32_3707 Shewanella putrefaciens CN-32 type IV pilus secretin PilQ YP_001185214.1 4314635 R 319224 CDS YP_001185215.1 146294791 5079092 complement(4316708..4317226) 1 NC_009438.1 PFAM: Pilus assembly protein, PilQ; KEGG: shm:Shewmr7_0245 pilus assembly protein, PilQ; pilus assembly protein, PilQ 4317226 5079092 Sputcn32_3708 Shewanella putrefaciens CN-32 pilus assembly protein, PilQ YP_001185215.1 4316708 R 319224 CDS YP_001185216.1 146294792 5079093 complement(4317223..4317849) 1 NC_009438.1 PFAM: Pilus assembly protein, PilO; KEGG: shm:Shewmr7_0244 pilus assembly protein, PilO; pilus assembly protein, PilO 4317849 5079093 Sputcn32_3709 Shewanella putrefaciens CN-32 pilus assembly protein, PilO YP_001185216.1 4317223 R 319224 CDS YP_001185217.1 146294793 5079094 complement(4317846..4318430) 1 NC_009438.1 PFAM: Fimbrial assembly family protein; KEGG: shm:Shewmr7_0243 fimbrial assembly family protein; fimbrial assembly family protein 4318430 5079094 Sputcn32_3710 Shewanella putrefaciens CN-32 fimbrial assembly family protein YP_001185217.1 4317846 R 319224 CDS YP_001185218.1 146294794 5079095 complement(4318418..4319497) 1 NC_009438.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: son:SO0281 type IV pilus biogenesis protein PilM; type IV pilus assembly protein PilM 4319497 5079095 Sputcn32_3711 Shewanella putrefaciens CN-32 type IV pilus assembly protein PilM YP_001185218.1 4318418 R 319224 CDS YP_001185219.1 146294795 5079096 4319686..4322205 1 NC_009438.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase; KEGG: shm:Shewmr7_0241 penicillin-binding protein, 1A family; 1A family penicillin-binding protein 4322205 5079096 Sputcn32_3712 Shewanella putrefaciens CN-32 1A family penicillin-binding protein YP_001185219.1 4319686 D 319224 CDS YP_001185220.1 146294796 5079097 complement(4322287..4323654) 1 NC_009438.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 4323654 5079097 Sputcn32_3713 Shewanella putrefaciens CN-32 argininosuccinate lyase YP_001185220.1 4322287 R 319224 CDS YP_001185221.1 146294797 5079098 complement(4323747..4324970) 1 NC_009438.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 4324970 5079098 Sputcn32_3714 Shewanella putrefaciens CN-32 argininosuccinate synthase YP_001185221.1 4323747 R 319224 CDS YP_001185222.1 146294798 5079099 complement(4325030..4325935) 1 NC_009438.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 4325935 5079099 Sputcn32_3715 Shewanella putrefaciens CN-32 ornithine carbamoyltransferase YP_001185222.1 4325030 R 319224 CDS YP_001185223.1 146294799 5079100 complement(4325948..4326730) 1 NC_009438.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 4326730 5079100 Sputcn32_3716 Shewanella putrefaciens CN-32 acetylglutamate kinase YP_001185223.1 4325948 R 319224 CDS YP_001185224.1 146294800 5079101 complement(4326762..4327814) 1 NC_009438.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 4327814 argC 5079101 argC Shewanella putrefaciens CN-32 N-acetyl-gamma-glutamyl-phosphate reductase YP_001185224.1 4326762 R 319224 CDS YP_001185225.1 146294801 5079102 4328365..4331034 1 NC_009438.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 4331034 5079102 Sputcn32_3718 Shewanella putrefaciens CN-32 phosphoenolpyruvate carboxylase YP_001185225.1 4328365 D 319224 CDS YP_001185226.1 146294802 5079103 4331034..4331579 1 NC_009438.1 PFAM: protein of unknown function DUF1439; KEGG: shm:Shewmr7_0234 protein of unknown function DUF1439; hypothetical protein 4331579 5079103 Sputcn32_3719 Shewanella putrefaciens CN-32 hypothetical protein YP_001185226.1 4331034 D 319224 CDS YP_001185227.1 146294803 5079104 complement(4331670..4332944) 1 NC_009438.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: son:SO0272 competence/damage-inducible protein CinA; competence/damage-inducible protein CinA 4332944 5079104 Sputcn32_3720 Shewanella putrefaciens CN-32 competence/damage-inducible protein CinA YP_001185227.1 4331670 R 319224 CDS YP_001185228.1 146294804 5079108 complement(4338895..4339482) 1 NC_009438.1 PFAM: Redoxin domain protein; KEGG: shm:Shewmr7_0232 redoxin domain protein; redoxin domain-containing protein 4339482 5079108 Sputcn32_3721 Shewanella putrefaciens CN-32 redoxin domain-containing protein YP_001185228.1 4338895 R 319224 CDS YP_001185229.1 146294805 5079109 complement(4339479..4339958) 1 NC_009438.1 PFAM: cytochrome C biogenesis protein; KEGG: son:SO0268 cytochrome c-type biogenesis protein CcmH; cytochrome C biogenesis protein 4339958 5079109 Sputcn32_3722 Shewanella putrefaciens CN-32 cytochrome C biogenesis protein YP_001185229.1 4339479 R 319224 CDS YP_001185230.1 146294806 5079110 complement(4339955..4340509) 1 NC_009438.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; KEGG: son:SO0267 thiol:disulfide interchange protein DsbE; periplasmic protein thiol--disulfide oxidoreductase DsbE 4340509 5079110 Sputcn32_3723 Shewanella putrefaciens CN-32 periplasmic protein thiol--disulfide oxidoreductase DsbE YP_001185230.1 4339955 R 319224 CDS YP_001185231.1 146294807 5079111 complement(4340521..4342500) 1 NC_009438.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: shm:Shewmr7_0229 cytochrome c-type biogenesis protein CcmF; cytochrome c-type biogenesis protein CcmF 4342500 5079111 Sputcn32_3724 Shewanella putrefaciens CN-32 cytochrome c-type biogenesis protein CcmF YP_001185231.1 4340521 R 319224 CDS YP_001185232.1 146294808 5079112 4342897..4344144 1 NC_009438.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: son:SO0265 cytochrome c-type biogenesis protein CcmH; hypothetical protein 4344144 5079112 Sputcn32_3725 Shewanella putrefaciens CN-32 hypothetical protein YP_001185232.1 4342897 D 319224 CDS YP_001185233.1 146294809 5079113 complement(4344206..4344505) 1 NC_009438.1 PFAM: cytochrome c, class I; KEGG: shm:Shewmr7_0227 cytochrome c, class I; cytochrome c, class I 4344505 5079113 Sputcn32_3726 Shewanella putrefaciens CN-32 cytochrome c, class I YP_001185233.1 4344206 R 319224 CDS YP_001185234.1 146294810 5079114 4344826..4345476 1 NC_009438.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 4345476 5079114 Sputcn32_3727 Shewanella putrefaciens CN-32 cytochrome c biogenesis protein CcmA YP_001185234.1 4344826 D 319224 CDS YP_001185235.1 146294811 5079115 4345488..4346174 1 NC_009438.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: son:SO0262 heme exporter protein CcmB; heme exporter protein CcmB 4346174 5079115 Sputcn32_3728 Shewanella putrefaciens CN-32 heme exporter protein CcmB YP_001185235.1 4345488 D 319224 CDS YP_001185236.1 146294812 5079116 4346176..4346922 1 NC_009438.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: son:SO0261 heme exporter protein CcmC; heme exporter protein CcmC 4346922 5079116 Sputcn32_3729 Shewanella putrefaciens CN-32 heme exporter protein CcmC YP_001185236.1 4346176 D 319224 CDS YP_001185237.1 146294813 5079117 4346922..4347122 1 NC_009438.1 PFAM: Heme exporter protein D (CcmD); KEGG: shm:Shewmr7_0223 heme exporter protein D (CcmD); Heme exporter protein CcmD 4347122 5079117 Sputcn32_3730 Shewanella putrefaciens CN-32 Heme exporter protein CcmD YP_001185237.1 4346922 D 319224 CDS YP_001185238.1 146294814 5079118 4347119..4347607 1 NC_009438.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 4347607 5079118 Sputcn32_3731 Shewanella putrefaciens CN-32 cytochrome c-type biogenesis protein CcmE YP_001185238.1 4347119 D 319224 CDS YP_001185239.1 146294815 5079120 complement(4348277..4348672) 1 NC_009438.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 4348672 rplQ 5079120 rplQ Shewanella putrefaciens CN-32 50S ribosomal protein L17 YP_001185239.1 4348277 R 319224 CDS YP_001185240.1 146294816 5079121 complement(4348713..4349702) 1 NC_009438.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 4349702 5079121 Sputcn32_3734 Shewanella putrefaciens CN-32 DNA-directed RNA polymerase subunit alpha YP_001185240.1 4348713 R 319224 CDS YP_001185241.1 146294817 5079122 complement(4349727..4350347) 1 NC_009438.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 4350347 rpsD 5079122 rpsD Shewanella putrefaciens CN-32 30S ribosomal protein S4 YP_001185241.1 4349727 R 319224 CDS YP_001185242.1 146294818 5079123 complement(4350380..4350772) 1 NC_009438.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 4350772 5079123 Sputcn32_3736 Shewanella putrefaciens CN-32 30S ribosomal protein S11 YP_001185242.1 4350380 R 319224 CDS YP_001185243.1 146294819 5079124 complement(4350788..4351144) 1 NC_009438.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 4351144 rpsM 5079124 rpsM Shewanella putrefaciens CN-32 30S ribosomal protein S13 YP_001185243.1 4350788 R 319224 CDS YP_001185244.1 146294820 5079125 complement(4351261..4351374) 1 NC_009438.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 4351374 rpmJ 5079125 rpmJ Shewanella putrefaciens CN-32 50S ribosomal protein L36 YP_001185244.1 4351261 R 319224 CDS YP_001185245.1 146294821 5079126 complement(4351396..4352736) 1 NC_009438.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 4352736 secY 5079126 secY Shewanella putrefaciens CN-32 preprotein translocase subunit SecY YP_001185245.1 4351396 R 319224 CDS YP_001185246.1 146294822 5079127 complement(4352744..4353178) 1 NC_009438.1 late assembly protein; 50S ribosomal protein L15 4353178 rplO 5079127 rplO Shewanella putrefaciens CN-32 50S ribosomal protein L15 YP_001185246.1 4352744 R 319224 CDS YP_001185247.1 146294823 5079128 complement(4353182..4353364) 1 NC_009438.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 4353364 rpmD 5079128 rpmD Shewanella putrefaciens CN-32 50S ribosomal protein L30 YP_001185247.1 4353182 R 319224 CDS YP_001185248.1 146294824 5079129 complement(4353371..4353874) 1 NC_009438.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 4353874 rpsE 5079129 rpsE Shewanella putrefaciens CN-32 30S ribosomal protein S5 YP_001185248.1 4353371 R 319224 CDS YP_001185249.1 146294825 5079130 complement(4353887..4354237) 1 NC_009438.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 4354237 rplR 5079130 rplR Shewanella putrefaciens CN-32 50S ribosomal protein L18 YP_001185249.1 4353887 R 319224 CDS YP_001185250.1 146294826 5079131 complement(4354248..4354781) 1 NC_009438.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 4354781 rplF 5079131 rplF Shewanella putrefaciens CN-32 50S ribosomal protein L6 YP_001185250.1 4354248 R 319224 CDS YP_001185251.1 146294827 5079132 complement(4354792..4355184) 1 NC_009438.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 4355184 rpsH 5079132 rpsH Shewanella putrefaciens CN-32 30S ribosomal protein S8 YP_001185251.1 4354792 R 319224 CDS YP_001185252.1 146294828 5079133 complement(4355209..4355514) 1 NC_009438.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 4355514 rpsN 5079133 rpsN Shewanella putrefaciens CN-32 30S ribosomal protein S14 YP_001185252.1 4355209 R 319224 CDS YP_001185253.1 146294829 5079134 complement(4355525..4356064) 1 NC_009438.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 4356064 rplE 5079134 rplE Shewanella putrefaciens CN-32 50S ribosomal protein L5 YP_001185253.1 4355525 R 319224 CDS YP_001185254.1 146294830 5079135 complement(4356077..4356391) 1 NC_009438.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 4356391 rplX 5079135 rplX Shewanella putrefaciens CN-32 50S ribosomal protein L24 YP_001185254.1 4356077 R 319224 CDS YP_001185255.1 146294831 5079136 complement(4356403..4356771) 1 NC_009438.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 4356771 rplN 5079136 rplN Shewanella putrefaciens CN-32 50S ribosomal protein L14 YP_001185255.1 4356403 R 319224 CDS YP_001185256.1 146294832 5081030 complement(4356950..4357198) 1 NC_009438.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 4357198 rpsQ 5081030 rpsQ Shewanella putrefaciens CN-32 30S ribosomal protein S17 YP_001185256.1 4356950 R 319224 CDS YP_001185257.1 146294833 5081031 complement(4357198..4357389) 1 NC_009438.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 4357389 5081031 Sputcn32_3751 Shewanella putrefaciens CN-32 50S ribosomal protein L29 YP_001185257.1 4357198 R 319224 CDS YP_001185258.1 146294834 5081032 complement(4357389..4357799) 1 NC_009438.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 4357799 rplP 5081032 rplP Shewanella putrefaciens CN-32 50S ribosomal protein L16 YP_001185258.1 4357389 R 319224 CDS YP_001185259.1 146294835 5081033 complement(4357811..4358503) 1 NC_009438.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 4358503 rpsC 5081033 rpsC Shewanella putrefaciens CN-32 30S ribosomal protein S3 YP_001185259.1 4357811 R 319224 CDS YP_001185260.1 146294836 5081034 complement(4358513..4358845) 1 NC_009438.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 4358845 rplV 5081034 rplV Shewanella putrefaciens CN-32 50S ribosomal protein L22 YP_001185260.1 4358513 R 319224 CDS YP_001185261.1 146294837 5081035 complement(4358861..4359139) 1 NC_009438.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 4359139 rpsS 5081035 rpsS Shewanella putrefaciens CN-32 30S ribosomal protein S19 YP_001185261.1 4358861 R 319224 CDS YP_001185262.1 146294838 5081036 complement(4359154..4359978) 1 NC_009438.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 4359978 rplB 5081036 rplB Shewanella putrefaciens CN-32 50S ribosomal protein L2 YP_001185262.1 4359154 R 319224 CDS YP_001185263.1 146294839 5081037 complement(4359995..4360300) 1 NC_009438.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 4360300 rplW 5081037 rplW Shewanella putrefaciens CN-32 50S ribosomal protein L23 YP_001185263.1 4359995 R 319224 CDS YP_001185264.1 146294840 5081038 complement(4360297..4360902) 1 NC_009438.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4360902 rplD 5081038 rplD Shewanella putrefaciens CN-32 50S ribosomal protein L4 YP_001185264.1 4360297 R 319224 CDS YP_001185265.1 146294841 5081039 complement(4360920..4361558) 1 NC_009438.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 4361558 rplC 5081039 rplC Shewanella putrefaciens CN-32 50S ribosomal protein L3 YP_001185265.1 4360920 R 319224 CDS YP_001185266.1 146294842 5081040 complement(4361586..4361897) 1 NC_009438.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 4361897 rpsJ 5081040 rpsJ Shewanella putrefaciens CN-32 30S ribosomal protein S10 YP_001185266.1 4361586 R 319224 CDS YP_001185267.1 146294843 5081041 complement(4362232..4363416) 1 NC_009438.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4363416 5081041 Sputcn32_3761 Shewanella putrefaciens CN-32 elongation factor Tu YP_001185267.1 4362232 R 319224 CDS YP_001185268.1 146294844 5081042 complement(4363489..4365585) 1 NC_009438.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4365585 5081042 Sputcn32_3762 Shewanella putrefaciens CN-32 elongation factor G YP_001185268.1 4363489 R 319224 CDS YP_001185269.1 146294845 5081043 complement(4365664..4366134) 1 NC_009438.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4366134 5081043 Sputcn32_3763 Shewanella putrefaciens CN-32 30S ribosomal protein S7 YP_001185269.1 4365664 R 319224 CDS YP_001185270.1 146294846 5081044 complement(4366215..4366589) 1 NC_009438.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4366589 rpsL 5081044 rpsL Shewanella putrefaciens CN-32 30S ribosomal protein S12 YP_001185270.1 4366215 R 319224 CDS YP_001185271.1 146294847 5081045 complement(4366769..4370986) 1 NC_009438.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 4370986 5081045 Sputcn32_3765 Shewanella putrefaciens CN-32 DNA-directed RNA polymerase subunit beta' YP_001185271.1 4366769 R 319224 CDS YP_001185272.1 146294848 5081046 complement(4371070..4375101) 1 NC_009438.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 4375101 rpoB 5081046 rpoB Shewanella putrefaciens CN-32 DNA-directed RNA polymerase subunit beta YP_001185272.1 4371070 R 319224 CDS YP_001185273.1 146294849 5081047 complement(4375342..4375710) 1 NC_009438.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 4375710 rplL 5081047 rplL Shewanella putrefaciens CN-32 50S ribosomal protein L7/L12 YP_001185273.1 4375342 R 319224 CDS YP_001185274.1 146294850 5081048 complement(4375765..4376265) 1 NC_009438.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 4376265 rplJ 5081048 rplJ Shewanella putrefaciens CN-32 50S ribosomal protein L10 YP_001185274.1 4375765 R 319224 CDS YP_001185275.1 146294851 5081049 complement(4376532..4377233) 1 NC_009438.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 4377233 rplA 5081049 rplA Shewanella putrefaciens CN-32 50S ribosomal protein L1 YP_001185275.1 4376532 R 319224 CDS YP_001185276.1 146294852 5081050 complement(4377238..4377666) 1 NC_009438.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 4377666 rplK 5081050 rplK Shewanella putrefaciens CN-32 50S ribosomal protein L11 YP_001185276.1 4377238 R 319224 CDS YP_001185277.1 146294853 5081051 complement(4377794..4378345) 1 NC_009438.1 KEGG: shm:Shewmr7_0182 NusG antitermination factor; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG; KOW domain protein; SMART: NGN domain protein; KOW (Kyrpides, Ouzounis, Woese) domain protein; NusG antitermination factor 4378345 5081051 Sputcn32_3771 Shewanella putrefaciens CN-32 NusG antitermination factor YP_001185277.1 4377794 R 319224 CDS YP_001185278.1 146294854 5081052 complement(4378355..4378726) 1 NC_009438.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 4378726 secE 5081052 secE Shewanella putrefaciens CN-32 preprotein translocase subunit SecE YP_001185278.1 4378355 R 319224 CDS YP_001185279.1 146294855 5081053 complement(4379002..4380186) 1 NC_009438.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4380186 5081053 Sputcn32_3773 Shewanella putrefaciens CN-32 elongation factor Tu YP_001185279.1 4379002 R 319224 CDS YP_001185280.1 146294856 5081058 4380899..4381849 1 NC_009438.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 4381849 5081058 Sputcn32_3774 Shewanella putrefaciens CN-32 pantothenate kinase YP_001185280.1 4380899 D 319224 CDS YP_001185281.1 146294857 5081059 complement(4381860..4382819) 1 NC_009438.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 4382819 5081059 Sputcn32_3775 Shewanella putrefaciens CN-32 biotin--protein ligase YP_001185281.1 4381860 R 319224 CDS YP_001185282.1 146294858 5081060 complement(4382812..4383837) 1 NC_009438.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 4383837 murB 5081060 murB Shewanella putrefaciens CN-32 UDP-N-acetylenolpyruvoylglucosamine reductase YP_001185282.1 4382812 R 319224 CDS YP_001185283.1 146294859 5081061 4384096..4385262 1 NC_009438.1 PFAM: ribonuclease T2; KEGG: son:SO4599 ribonuclease, T2 family; ribonuclease T2 4385262 5081061 Sputcn32_3777 Shewanella putrefaciens CN-32 ribonuclease T2 YP_001185283.1 4384096 D 319224 CDS YP_001185284.1 146294860 5081062 complement(4385353..4386609) 1 NC_009438.1 TIGRFAM: aromatic amino acid transporter; PFAM: aromatic amino acid permease; Amino acid transporter, transmembrane; KEGG: son:SO4601 tryptophan-specific transport protein; aromatic amino acid transporter 4386609 5081062 Sputcn32_3778 Shewanella putrefaciens CN-32 aromatic amino acid transporter YP_001185284.1 4385353 R 319224 CDS YP_001185285.1 146294861 5081063 complement(4386609..4389032) 1 NC_009438.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 4389032 5081063 Sputcn32_3779 Shewanella putrefaciens CN-32 glycerol-3-phosphate acyltransferase YP_001185285.1 4386609 R 319224 CDS YP_001185286.1 146294862 5081064 4389382..4390002 1 NC_009438.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 4390002 5081064 Sputcn32_3780 Shewanella putrefaciens CN-32 LexA repressor YP_001185286.1 4389382 D 319224 CDS YP_001185287.1 146294863 5081065 4389999..4390511 1 NC_009438.1 KEGG: she:Shewmr4_3790 hypothetical protein; hypothetical protein 4390511 5081065 Sputcn32_3781 Shewanella putrefaciens CN-32 hypothetical protein YP_001185287.1 4389999 D 319224 CDS YP_001185288.1 146294864 5081066 4390907..4392445 1 NC_009438.1 PFAM: cytochrome c oxidase, subunit II; cytochrome c, class I; cytochrome C oxidase subunit II, transmembrane region; KEGG: she:Shewmr4_3791 cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 4392445 5081066 Sputcn32_3782 Shewanella putrefaciens CN-32 cytochrome c oxidase subunit II YP_001185288.1 4390907 D 319224 CDS YP_001185289.1 146294865 5081067 4392455..4394047 1 NC_009438.1 PFAM: cytochrome c oxidase, subunit I; KEGG: shm:Shewmr7_3865 cytochrome-c oxidase; cytochrome-c oxidase 4394047 5081067 Sputcn32_3783 Shewanella putrefaciens CN-32 cytochrome-c oxidase YP_001185289.1 4392455 D 319224 CDS YP_001185290.1 146294866 5081068 4394049..4394615 1 NC_009438.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 4394615 5081068 Sputcn32_3784 Shewanella putrefaciens CN-32 cytochrome C oxidase assembly protein YP_001185290.1 4394049 D 319224 CDS YP_001185291.1 146294867 5081069 4394612..4395487 1 NC_009438.1 PFAM: cytochrome c oxidase, subunit III; KEGG: shm:Shewmr7_3867 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 4395487 5081069 Sputcn32_3785 Shewanella putrefaciens CN-32 cytochrome c oxidase subunit III YP_001185291.1 4394612 D 319224 CDS YP_001185292.1 146294868 5081070 4395712..4396467 1 NC_009438.1 KEGG: son:SO4611 hypothetical protein; hypothetical protein 4396467 5081070 Sputcn32_3786 Shewanella putrefaciens CN-32 hypothetical protein YP_001185292.1 4395712 D 319224 CDS YP_001185293.1 146294869 5081071 4396545..4397090 1 NC_009438.1 KEGG: son:SO4612 hypothetical protein; hypothetical protein 4397090 5081071 Sputcn32_3787 Shewanella putrefaciens CN-32 hypothetical protein YP_001185293.1 4396545 D 319224 CDS YP_001185294.1 146294870 5081072 4397090..4398067 1 NC_009438.1 PFAM: cytochrome oxidase assembly; KEGG: son:SO4613 cytochrome oxidase assembly protein, putative; cytochrome oxidase assembly 4398067 5081072 Sputcn32_3788 Shewanella putrefaciens CN-32 cytochrome oxidase assembly YP_001185294.1 4397090 D 319224 CDS YP_001185295.1 146294871 5081073 4398082..4398987 1 NC_009438.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 4398987 5081073 Sputcn32_3789 Shewanella putrefaciens CN-32 protoheme IX farnesyltransferase YP_001185295.1 4398082 D 319224 CDS YP_001185296.1 146294872 5081074 4398992..4399624 1 NC_009438.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: shm:Shewmr7_3873 electron transport protein SCO1/SenC; electron transport protein SCO1/SenC 4399624 5081074 Sputcn32_3790 Shewanella putrefaciens CN-32 electron transport protein SCO1/SenC YP_001185296.1 4398992 D 319224 CDS YP_001185297.1 146294873 5081075 complement(4399625..4400671) 1 NC_009438.1 PFAM: polysaccharide deacetylase; KEGG: she:Shewmr4_3801 polysaccharide deacetylase; polysaccharide deacetylase 4400671 5081075 Sputcn32_3791 Shewanella putrefaciens CN-32 polysaccharide deacetylase YP_001185297.1 4399625 R 319224 CDS YP_001185298.1 146294874 5081076 4400694..4402064 1 NC_009438.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: son:SO4617 DNA-damage-inducible protein F; MATE efflux family protein 4402064 5081076 Sputcn32_3792 Shewanella putrefaciens CN-32 MATE efflux family protein YP_001185298.1 4400694 D 319224 CDS YP_001185299.1 146294875 5081077 4402789..4403928 1 NC_009438.1 KEGG: dsy:DSY0720 hypothetical protein; hypothetical protein 4403928 5081077 Sputcn32_3793 Shewanella putrefaciens CN-32 hypothetical protein YP_001185299.1 4402789 D 319224 CDS YP_001185300.1 146294876 5081128 complement(4404194..4404772) 1 NC_009438.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 4404772 5081128 Sputcn32_3794 Shewanella putrefaciens CN-32 putative DNA uptake protein YP_001185300.1 4404194 R 319224 CDS YP_001185301.1 146294877 5081129 complement(4405012..4406760) 1 NC_009438.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: son:SO4620 fumarate reductase, flavoprotein subunit precursor; flavocytochrome c 4406760 5081129 Sputcn32_3795 Shewanella putrefaciens CN-32 flavocytochrome c YP_001185301.1 4405012 R 319224 CDS YP_001185302.1 146294878 5081130 complement(4406853..4407617) 1 NC_009438.1 KEGG: son:SO4621 hypothetical protein; hypothetical protein 4407617 5081130 Sputcn32_3796 Shewanella putrefaciens CN-32 hypothetical protein YP_001185302.1 4406853 R 319224 CDS YP_001185303.1 146294879 5081131 complement(4407797..4409038) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase A domain protein domain protein; KEGG: son:SO4622 sensor histidine kinase; ATPase domain-containing protein 4409038 5081131 Sputcn32_3797 Shewanella putrefaciens CN-32 ATPase domain-containing protein YP_001185303.1 4407797 R 319224 CDS YP_001185304.1 146294880 5081132 complement(4409025..4409702) 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4623 DNA-binding response regulator; two component transcriptional regulator 4409702 5081132 Sputcn32_3798 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001185304.1 4409025 R 319224 CDS YP_001185305.1 146294881 5081133 complement(4409705..4410451) 1 NC_009438.1 PFAM: regulatory protein, LuxR; KEGG: son:SO4624 transcriptional regulator, LuxR family; response regulator receiver protein 4410451 5081133 Sputcn32_3799 Shewanella putrefaciens CN-32 response regulator receiver protein YP_001185305.1 4409705 R 319224 CDS YP_001185306.1 146294882 5081134 complement(4410619..4411407) 1 NC_009438.1 KEGG: son:SO4625 competence protein ComF; competence protein ComF 4411407 5081134 Sputcn32_3800 Shewanella putrefaciens CN-32 competence protein ComF YP_001185306.1 4410619 R 319224 CDS YP_001185307.1 146294883 5081135 4411511..4412233 1 NC_009438.1 TIGRFAM: bioH protein; PFAM: alpha/beta hydrolase fold; KEGG: shm:Shewmr7_3882 BioH protein; bioH protein 4412233 5081135 Sputcn32_3801 Shewanella putrefaciens CN-32 bioH protein YP_001185307.1 4411511 D 319224 CDS YP_001185308.1 146294884 5081136 4412295..4412852 1 NC_009438.1 KEGG: she:Shewmr4_3807 hypothetical protein; hypothetical protein 4412852 5081136 Sputcn32_3802 Shewanella putrefaciens CN-32 hypothetical protein YP_001185308.1 4412295 D 319224 CDS YP_001185309.1 146294885 5081137 complement(4412916..4414880) 1 NC_009438.1 PFAM: sulfatase; KEGG: shm:Shewmr7_3884 sulfatase; sulfatase 4414880 5081137 Sputcn32_3803 Shewanella putrefaciens CN-32 sulfatase YP_001185309.1 4412916 R 319224 CDS YP_001185310.1 146294886 5081138 complement(4415097..4417538) 1 NC_009438.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase, RNase H domain protein fold; KEGG: son:SO4629 hypothetical protein; RNA-binding S1 domain-containing protein 4417538 5081138 Sputcn32_3804 Shewanella putrefaciens CN-32 RNA-binding S1 domain-containing protein YP_001185310.1 4415097 R 319224 CDS YP_001185311.1 146294887 5081139 complement(4417626..4417970) 1 NC_009438.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: she:Shewmr4_3810 transcription elongation factor GreB; GreA/GreB family elongation factor 4417970 5081139 Sputcn32_3805 Shewanella putrefaciens CN-32 GreA/GreB family elongation factor YP_001185311.1 4417626 R 319224 CDS YP_001185312.1 146294888 5081140 4418126..4419427 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: shm:Shewmr7_3887 phage integrase family protein; phage integrase family protein 4419427 5081140 Sputcn32_3806 Shewanella putrefaciens CN-32 phage integrase family protein YP_001185312.1 4418126 D 319224 CDS YP_001185313.1 146294889 5081141 4419424..4423725 1 NC_009438.1 KEGG: shm:Shewmr7_3888 phage integrase family protein; phage integrase family protein 4423725 5081141 Sputcn32_3807 Shewanella putrefaciens CN-32 phage integrase family protein YP_001185313.1 4419424 D 319224 CDS YP_001185314.1 146294890 5081142 4423727..4424347 1 NC_009438.1 KEGG: shm:Shewmr7_3889 hypothetical protein; hypothetical protein 4424347 5081142 Sputcn32_3808 Shewanella putrefaciens CN-32 hypothetical protein YP_001185314.1 4423727 D 319224 CDS YP_001185315.1 146294891 5081143 4424368..4424850 1 NC_009438.1 TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: shm:Shewmr7_3890 transcription elongation factor GreB; transcription elongation factor GreB 4424850 5081143 Sputcn32_3809 Shewanella putrefaciens CN-32 transcription elongation factor GreB YP_001185315.1 4424368 D 319224 CDS YP_001185316.1 146294892 5081144 4425513..4425887 1 NC_009438.1 KEGG: abo:ABO_1505 hypothetical protein; hypothetical protein 4425887 5081144 Sputcn32_3810 Shewanella putrefaciens CN-32 hypothetical protein YP_001185316.1 4425513 D 319224 CDS YP_001185317.1 146294893 5081146 complement(4426905..4427384) 1 NC_009438.1 KEGG: son:SO4533 ISSod10, transposase OrfA; ISSod10, transposase OrfA 4427384 5081146 Sputcn32_3812 Shewanella putrefaciens CN-32 ISSod10, transposase OrfA YP_001185317.1 4426905 R 319224 CDS YP_001185318.1 146294894 5081147 complement(4427659..4427973) 1 NC_009438.1 KEGG: hch:HCH_00506 hypothetical protein; hypothetical protein 4427973 5081147 Sputcn32_3813 Shewanella putrefaciens CN-32 hypothetical protein YP_001185318.1 4427659 R 319224 CDS YP_001185319.1 146294895 5081148 complement(4428071..4429309) 1 NC_009438.1 PFAM: major facilitator superfamily MFS_1; KEGG: sfr:Sfri_4001 major facilitator superfamily MFS_1; major facilitator superfamily transporter 4429309 5081148 Sputcn32_3814 Shewanella putrefaciens CN-32 major facilitator superfamily transporter YP_001185319.1 4428071 R 319224 CDS YP_001185320.1 146294896 5081149 complement(4429333..4430343) 1 NC_009438.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 4430343 5081149 Sputcn32_3815 Shewanella putrefaciens CN-32 glyceraldehyde-3-phosphate dehydrogenase YP_001185320.1 4429333 R 319224 CDS YP_001185321.1 146294897 5081150 complement(4430418..4430909) 1 NC_009438.1 SMART: protein tyrosine phosphatase, catalytic region; KEGG: ppu:PP_1926 phosphatase family protein, putative; dual specificity protein phosphatase 4430909 5081150 Sputcn32_3816 Shewanella putrefaciens CN-32 dual specificity protein phosphatase YP_001185321.1 4430418 R 319224 CDS YP_001185322.1 146294898 5081151 complement(4430916..4431152) 1 NC_009438.1 KEGG: cps:CPS_3356 redox-active disulfide protein 2; redox-active disulfide protein 2 4431152 5081151 Sputcn32_3817 Shewanella putrefaciens CN-32 redox-active disulfide protein 2 YP_001185322.1 4430916 R 319224 CDS YP_001185323.1 146294899 5081152 complement(4431163..4432161) 1 NC_009438.1 PFAM: permease; KEGG: sfr:Sfri_1725 permease; permease 4432161 5081152 Sputcn32_3818 Shewanella putrefaciens CN-32 permease YP_001185323.1 4431163 R 319224 CDS YP_001185324.1 146294900 5081153 complement(4432258..4432764) 1 NC_009438.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: son:SO0533 arsenate reductase, putative; protein tyrosine phosphatase 4432764 5081153 Sputcn32_3819 Shewanella putrefaciens CN-32 protein tyrosine phosphatase YP_001185324.1 4432258 R 319224 CDS YP_001185325.1 146294901 5081154 complement(4432843..4433190) 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: son:SO0532 arsenical resistence operon repressor; regulatory protein ArsR 4433190 5081154 Sputcn32_3820 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001185325.1 4432843 R 319224 CDS YP_001185326.1 146294902 5081155 complement(4433183..4433599) 1 NC_009438.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sfr:Sfri_4004 transcriptional regulator, ArsR family protein; protein tyrosine phosphatase 4433599 5081155 Sputcn32_3821 Shewanella putrefaciens CN-32 protein tyrosine phosphatase YP_001185326.1 4433183 R 319224 CDS YP_001185327.1 146294903 5081156 complement(4433695..4433982) 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: son:SO0502 transcriptional regulator, ArsR family; regulatory protein ArsR 4433982 5081156 Sputcn32_3822 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001185327.1 4433695 R 319224 CDS YP_001185328.1 146294904 5081157 4434227..4435303 1 NC_009438.1 PFAM: permease; KEGG: son:SO0503 hypothetical protein; permease 4435303 5081157 Sputcn32_3823 Shewanella putrefaciens CN-32 permease YP_001185328.1 4434227 D 319224 CDS YP_001185329.1 146294905 5081158 4435433..4436887 1 NC_009438.1 PFAM: glutathione synthase, ATP-binding; KEGG: vfi:VF0976 glutathione synthetase; glutathione synthase 4436887 5081158 Sputcn32_3824 Shewanella putrefaciens CN-32 glutathione synthase YP_001185329.1 4435433 D 319224 CDS YP_001185330.1 146294906 5081159 complement(4436958..4437662) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: dsy:DSY4609 putative oxidoreductase iron-sulfur subunit; 4Fe-4S ferredoxin 4437662 5081159 Sputcn32_3825 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001185330.1 4436958 R 319224 CDS YP_001185331.1 146294907 5081160 complement(4437674..4440238) 1 NC_009438.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: dsy:DSY4131 putative anaerobic dehydrogenase; molybdopterin oxidoreductase 4440238 5081160 Sputcn32_3826 Shewanella putrefaciens CN-32 molybdopterin oxidoreductase YP_001185331.1 4437674 R 319224 CDS YP_001185332.1 146294908 5081161 4440603..4440965 1 NC_009438.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: dar:Daro_2638 arsenical resistance operon trans-acting repressor ArsD; arsenical resistance operon trans-acting repressor ArsD 4440965 5081161 Sputcn32_3827 Shewanella putrefaciens CN-32 arsenical resistance operon trans-acting repressor ArsD YP_001185332.1 4440603 D 319224 CDS YP_001185333.1 146294909 5081162 4440988..4442754 1 NC_009438.1 KEGG: dar:Daro_2637 anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA 4442754 5081162 Sputcn32_3828 Shewanella putrefaciens CN-32 arsenite-activated ATPase ArsA YP_001185333.1 4440988 D 319224 CDS YP_001185334.1 146294910 5081163 4442825..4444108 1 NC_009438.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sbo:SBO_3500 arsenical pump membrane protein; arsenical pump membrane protein 4444108 5081163 Sputcn32_3829 Shewanella putrefaciens CN-32 arsenical pump membrane protein YP_001185334.1 4442825 D 319224 CDS YP_001185335.1 146294911 5081164 4444229..4444705 1 NC_009438.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: sbo:SBO_3501 arsenate reductase; arsenate reductase 4444705 5081164 Sputcn32_3830 Shewanella putrefaciens CN-32 arsenate reductase YP_001185335.1 4444229 D 319224 CDS YP_001185336.1 146294912 5081165 complement(4444819..4447893) 1 NC_009438.1 PFAM: acriflavin resistance protein; KEGG: aeh:Mlg_0882 acriflavin resistance protein; acriflavin resistance protein 4447893 5081165 Sputcn32_3831 Shewanella putrefaciens CN-32 acriflavin resistance protein YP_001185336.1 4444819 R 319224 CDS YP_001185337.1 146294913 5081166 complement(4447890..4449014) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: xac:XAC2064 cation efflux system protein; RND family efflux transporter MFP subunit 4449014 5081166 Sputcn32_3832 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001185337.1 4447890 R 319224 CDS YP_001185338.1 146294914 5081167 complement(4449059..4449757) 1 NC_009438.1 PFAM: cytochrome c biogenesis protein, transmembrane region; KEGG: mhu:Mhun_0868 putative cytochrome c biogenesis protein; cytochrome c biogenesis protein, transmembrane region 4449757 5081167 Sputcn32_3833 Shewanella putrefaciens CN-32 cytochrome c biogenesis protein, transmembrane region YP_001185338.1 4449059 R 319224 CDS YP_001185339.1 146294915 5081168 complement(4449750..4450283) 1 NC_009438.1 KEGG: mhu:Mhun_0869 hypothetical protein; hypothetical protein 4450283 5081168 Sputcn32_3834 Shewanella putrefaciens CN-32 hypothetical protein YP_001185339.1 4449750 R 319224 CDS YP_001185340.1 146294916 5081169 complement(4450302..4450544) 1 NC_009438.1 TIGRFAM: redox-active disulfide protein 2; KEGG: plt:Plut_1705 redox-active disulfide protein 2; redox-active disulfide protein 2 4450544 5081169 Sputcn32_3835 Shewanella putrefaciens CN-32 redox-active disulfide protein 2 YP_001185340.1 4450302 R 319224 CDS YP_001185341.1 146294917 5081170 complement(4450605..4450913) 1 NC_009438.1 PFAM: regulatory protein, ArsR; KEGG: dps:DP0944 similar to ArsR-family transcription regulator; regulatory protein ArsR 4450913 5081170 Sputcn32_3836 Shewanella putrefaciens CN-32 regulatory protein ArsR YP_001185341.1 4450605 R 319224 CDS YP_001185342.1 146294918 5081171 complement(4451424..4451630) 1 NC_009438.1 PFAM: helix-turn-helix domain protein; KEGG: sfr:Sfri_3420 transcriptional regulator, XRE family protein; helix-turn-helix domain-containing protein 4451630 5081171 Sputcn32_3837 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001185342.1 4451424 R 319224 CDS YP_001185343.1 146294919 5081172 4451763..4452302 1 NC_009438.1 KEGG: sfr:Sfri_3419 hypothetical protein; hypothetical protein 4452302 5081172 Sputcn32_3838 Shewanella putrefaciens CN-32 hypothetical protein YP_001185343.1 4451763 D 319224 CDS YP_001185344.1 146294920 5081173 4452307..4453722 1 NC_009438.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; KEGG: sfr:Sfri_3418 type III restriction enzyme, res subunit; type III restriction enzyme, res subunit 4453722 5081173 Sputcn32_3839 Shewanella putrefaciens CN-32 type III restriction enzyme, res subunit YP_001185344.1 4452307 D 319224 CDS YP_001185345.1 146294921 5081174 complement(4453964..4456012) 1 NC_009438.1 KEGG: dar:Daro_2667 hypothetical protein; hypothetical protein 4456012 5081174 Sputcn32_3840 Shewanella putrefaciens CN-32 hypothetical protein YP_001185345.1 4453964 R 319224 CDS YP_001185346.1 146294922 5081175 complement(4456449..4457282) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vch:VCA0791 transposase OrfAB, subunit B; integrase catalytic subunit 4457282 5081175 Sputcn32_3841 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001185346.1 4456449 R 319224 CDS YP_001185347.1 146294923 5081176 complement(4457321..4457632) 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vch:VCA0792 transposase OrfAB, subunit A; transposase IS3/IS911 family protein 4457632 5081176 Sputcn32_3842 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001185347.1 4457321 R 319224 CDS YP_001185348.1 146294924 5081177 complement(4457833..4458744) 1 NC_009438.1 KEGG: dar:Daro_2669 hypothetical protein; hypothetical protein 4458744 5081177 Sputcn32_3843 Shewanella putrefaciens CN-32 hypothetical protein YP_001185348.1 4457833 R 319224 CDS YP_001185349.1 146294925 5081178 complement(4459039..4462101) 1 NC_009438.1 PFAM: helicase domain protein; type III restriction enzyme, res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases-like; KEGG: bja:bll8094 hypothetical protein; type III restriction enzyme, res subunit 4462101 5081178 Sputcn32_3844 Shewanella putrefaciens CN-32 type III restriction enzyme, res subunit YP_001185349.1 4459039 R 319224 CDS YP_001185350.1 146294926 5081179 complement(4462348..4462548) 1 NC_009438.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: shm:Shewmr7_3901 GreA/GreB family elongation factor; GreA/GreB family elongation factor 4462548 5081179 Sputcn32_3845 Shewanella putrefaciens CN-32 GreA/GreB family elongation factor YP_001185350.1 4462348 R 319224 CDS YP_001185351.1 146294927 5081228 4462925..4463650 1 NC_009438.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 4463650 ompR 5081228 ompR Shewanella putrefaciens CN-32 osmolarity response regulator YP_001185351.1 4462925 D 319224 CDS YP_001185352.1 146294928 5081229 4463693..4465009 1 NC_009438.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 4465009 envZ 5081229 envZ Shewanella putrefaciens CN-32 osmolarity sensor protein YP_001185352.1 4463693 D 319224 CDS YP_001185353.1 146294929 5081230 4465138..4467120 1 NC_009438.1 PFAM: histidine kinase, HAMP region domain protein; chemotaxis sensory transducer; KEGG: shm:Shewmr7_3904 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 4467120 5081230 Sputcn32_3848 Shewanella putrefaciens CN-32 methyl-accepting chemotaxis sensory transducer YP_001185353.1 4465138 D 319224 CDS YP_001185354.1 146294930 5081231 complement(4467201..4467674) 1 NC_009438.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: shm:Shewmr7_3905 redoxin domain protein; redoxin domain-containing protein 4467674 5081231 Sputcn32_3849 Shewanella putrefaciens CN-32 redoxin domain-containing protein YP_001185354.1 4467201 R 319224 CDS YP_001185355.1 146294931 5081232 complement(4467756..4468700) 1 NC_009438.1 KEGG: shm:Shewmr7_3906 hypothetical protein; hypothetical protein 4468700 5081232 Sputcn32_3850 Shewanella putrefaciens CN-32 hypothetical protein YP_001185355.1 4467756 R 319224 CDS YP_001185356.1 146294932 5081233 4469105..4469407 1 NC_009438.1 PFAM: Propeptide, PepSY amd peptidase M4; KEGG: shm:Shewmr7_3907 propeptide, PepSY amd peptidase M4; peptidase 4469407 5081233 Sputcn32_3851 Shewanella putrefaciens CN-32 peptidase YP_001185356.1 4469105 D 319224 CDS YP_001185357.1 146294933 5081234 4469410..4470105 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: son:SO4647 DNA-binding response regulator; two component transcriptional regulator 4470105 5081234 Sputcn32_3852 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001185357.1 4469410 D 319224 CDS YP_001185358.1 146294934 5081235 4470098..4471462 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; KEGG: son:SO4648 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 4471462 5081235 Sputcn32_3853 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001185358.1 4470098 D 319224 CDS YP_001185359.1 146294935 5081236 4471602..4473074 1 NC_009438.1 KEGG: shm:Shewmr7_3910 hypothetical protein; hypothetical protein 4473074 5081236 Sputcn32_3854 Shewanella putrefaciens CN-32 hypothetical protein YP_001185359.1 4471602 D 319224 CDS YP_001185360.1 146294936 5081237 complement(4473140..4473616) 1 NC_009438.1 KEGG: son:SO4656 hypothetical protein; hypothetical protein 4473616 5081237 Sputcn32_3855 Shewanella putrefaciens CN-32 hypothetical protein YP_001185360.1 4473140 R 319224 CDS YP_001185361.1 146294937 5081238 complement(4473695..4477345) 1 NC_009438.1 KEGG: shm:Shewmr7_3912 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; CHASE domain protein; MASE1 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase 4477345 5081238 Sputcn32_3856 Shewanella putrefaciens CN-32 PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase YP_001185361.1 4473695 R 319224 CDS YP_001185362.1 146294938 5081239 4477746..4478135 1 NC_009438.1 KEGG: she:Shewmr4_3822 hypothetical protein; hypothetical protein 4478135 5081239 Sputcn32_3857 Shewanella putrefaciens CN-32 hypothetical protein YP_001185362.1 4477746 D 319224 CDS YP_001185363.1 146294939 5081240 4478325..4479368 1 NC_009438.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase, subunit II; COX aromatic rich domain protein; KEGG: she:Shewmr4_3823 ubiquinol oxidase, subunit II; ubiquinol oxidase subunit II 4479368 5081240 Sputcn32_3858 Shewanella putrefaciens CN-32 ubiquinol oxidase subunit II YP_001185363.1 4478325 D 319224 CDS YP_001185364.1 146294940 5081241 4479371..4481350 1 NC_009438.1 PFAM: cytochrome c oxidase, subunit I; KEGG: shm:Shewmr7_3915 cytochrome-c oxidase; cytochrome-c oxidase 4481350 5081241 Sputcn32_3859 Shewanella putrefaciens CN-32 cytochrome-c oxidase YP_001185364.1 4479371 D 319224 CDS YP_001185365.1 146294941 5081242 4481352..4481972 1 NC_009438.1 PFAM: cytochrome c oxidase, subunit III; KEGG: she:Shewmr4_3825 cytochrome c oxidase, subunit III; cytochrome c oxidase subunit III 4481972 5081242 Sputcn32_3860 Shewanella putrefaciens CN-32 cytochrome c oxidase subunit III YP_001185365.1 4481352 D 319224 CDS YP_001185366.1 146294942 5081243 4481972..4482313 1 NC_009438.1 PFAM: cytochrome C oxidase subunit IV; KEGG: shm:Shewmr7_3917 cytochrome c oxidase subunit IV; cytochrome C oxidase subunit IV 4482313 5081243 Sputcn32_3861 Shewanella putrefaciens CN-32 cytochrome C oxidase subunit IV YP_001185366.1 4481972 D 319224 CDS YP_001185367.1 146294943 5081244 4482327..4483274 1 NC_009438.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 4483274 5081244 Sputcn32_3862 Shewanella putrefaciens CN-32 protoheme IX farnesyltransferase YP_001185367.1 4482327 D 319224 CDS YP_001185368.1 146294944 5081245 complement(4483413..4485614) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: she:Shewmr4_0950 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 4485614 5081245 Sputcn32_3863 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001185368.1 4483413 R 319224 CDS YP_001185369.1 146294945 5081246 complement(4485824..4487221) 1 NC_009438.1 PFAM: amino acid permease-associated region; Amino acid transporter, transmembrane; KEGG: pmu:PM0162 arginine/ornithine antiporter, putative; amino acid permease-associated protein 4487221 5081246 Sputcn32_3864 Shewanella putrefaciens CN-32 amino acid permease-associated protein YP_001185369.1 4485824 R 319224 CDS YP_001185370.1 146294946 5081247 complement(4487231..4488133) 1 NC_009438.1 PFAM: homocysteine S-methyltransferase; KEGG: ppu:PP_0658 homocysteine S-methyltransferase family protein; homocysteine S-methyltransferase 4488133 5081247 Sputcn32_3865 Shewanella putrefaciens CN-32 homocysteine S-methyltransferase YP_001185370.1 4487231 R 319224 CDS YP_001185371.1 146294947 5081248 complement(4488502..4490031) 1 NC_009438.1 PFAM: helix-turn-helix domain protein; KEGG: shm:Shewmr7_3944 transcriptional regulator, XRE family; XRE family transcriptional regulator 4490031 5081248 Sputcn32_3866 Shewanella putrefaciens CN-32 XRE family transcriptional regulator YP_001185371.1 4488502 R 319224 CDS YP_001185372.1 146294948 5081249 4490285..4490848 1 NC_009438.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 4490848 5081249 Sputcn32_3867 Shewanella putrefaciens CN-32 malate synthase YP_001185372.1 4490285 D 319224 CDS YP_001185373.1 146294949 5081250 4491134..4492084 1 NC_009438.1 PFAM: conserved hypothetical protein 698; KEGG: she:Shewmr4_3853 conserved hypothetical protein 698; hypothetical protein 4492084 5081250 Sputcn32_3868 Shewanella putrefaciens CN-32 hypothetical protein YP_001185373.1 4491134 D 319224 CDS YP_001185374.1 146294950 5081251 complement(4492105..4492257) 1 NC_009438.1 KEGG: shm:Shewmr7_3947 hypothetical protein; hypothetical protein 4492257 5081251 Sputcn32_3869 Shewanella putrefaciens CN-32 hypothetical protein YP_001185374.1 4492105 R 319224 CDS YP_001185375.1 146294951 5081252 complement(4492500..4493123) 1 NC_009438.1 PFAM: Paraquat-inducible protein A; KEGG: shm:Shewmr7_3953 paraquat-inducible protein A; paraquat-inducible protein A 4493123 5081252 Sputcn32_3870 Shewanella putrefaciens CN-32 paraquat-inducible protein A YP_001185375.1 4492500 R 319224 CDS YP_001185376.1 146294952 5081253 complement(4493228..4494418) 1 NC_009438.1 PFAM: metal-dependent phosphohydrolase, HD sub domain; SMART: metal-dependent phosphohydrolase, HD region; KEGG: son:SO4711 HD domain protein; metal dependent phosphohydrolase 4494418 5081253 Sputcn32_3871 Shewanella putrefaciens CN-32 metal dependent phosphohydrolase YP_001185376.1 4493228 R 319224 CDS YP_001185377.1 146294953 5081254 complement(4494683..4496029) 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: she:Shewmr4_3866 ABC transporter related; ABC transporter-like protein 4496029 5081254 Sputcn32_3872 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001185377.1 4494683 R 319224 CDS YP_001185378.1 146294954 5081255 4496663..4498021 1 NC_009438.1 TIGRFAM: isochorismate synthases; PFAM: Anthranilate synthase component I and chorismate binding protein; KEGG: she:Shewmr4_3868 isochorismate synthases; isochorismate synthase 4498021 5081255 Sputcn32_3873 Shewanella putrefaciens CN-32 isochorismate synthase YP_001185378.1 4496663 D 319224 CDS YP_001185379.1 146294955 5081256 complement(4498055..4498789) 1 NC_009438.1 KEGG: she:Shewmr4_3869 hypothetical protein; hypothetical protein 4498789 5081256 Sputcn32_3874 Shewanella putrefaciens CN-32 hypothetical protein YP_001185379.1 4498055 R 319224 CDS YP_001185380.1 146294956 5081257 4499030..4499689 1 NC_009438.1 TIGRFAM: conserved hypothetical integral membrane protein; PFAM: protein of unknown function DUF165; KEGG: son:SO4715 hypothetical protein; hypothetical protein 4499689 5081257 Sputcn32_3875 Shewanella putrefaciens CN-32 hypothetical protein YP_001185380.1 4499030 D 319224 CDS YP_001185381.1 146294957 5081258 4499789..4500247 1 NC_009438.1 KEGG: she:Shewmr4_3871 acetyltransferase, GNAT family; acetyltransferase 4500247 5081258 Sputcn32_3876 Shewanella putrefaciens CN-32 acetyltransferase YP_001185381.1 4499789 D 319224 CDS YP_001185382.1 146294958 5081259 complement(4500476..4502599) 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: shm:Shewmr7_3965 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4502599 5081259 Sputcn32_3877 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001185382.1 4500476 R 319224 CDS YP_001185383.1 146294959 5081260 complement(4502601..4504031) 1 NC_009438.1 PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: shm:Shewmr7_3966 two component, sigma54 specific, transcriptional regulator, fis family; two component, sigma54 specific, Fis family transcriptional regulator 4504031 5081260 Sputcn32_3878 Shewanella putrefaciens CN-32 two component, sigma54 specific, Fis family transcriptional regulator YP_001185383.1 4502601 R 319224 CDS YP_001185384.1 146294960 5081261 4504270..4505094 1 NC_009438.1 PFAM: extracellular solute-binding protein, family 1; KEGG: she:Shewmr4_3874 extracellular solute-binding protein, family 1; extracellular solute-binding protein 4505094 5081261 Sputcn32_3879 Shewanella putrefaciens CN-32 extracellular solute-binding protein YP_001185384.1 4504270 D 319224 CDS YP_001185385.1 146294961 5081262 4505091..4505798 1 NC_009438.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: shm:Shewmr7_3968 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein 4505798 5081262 Sputcn32_3880 Shewanella putrefaciens CN-32 binding-protein-dependent transport system inner membrane protein YP_001185385.1 4505091 D 319224 CDS YP_001185386.1 146294962 5081263 4505802..4506512 1 NC_009438.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: shm:Shewmr7_3969 ABC transporter related; ABC transporter-like protein 4506512 5081263 Sputcn32_3881 Shewanella putrefaciens CN-32 ABC transporter-like protein YP_001185386.1 4505802 D 319224 CDS YP_001185387.1 146294963 5081264 4506496..4507083 1 NC_009438.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: shm:Shewmr7_3970 molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4507083 5081264 Sputcn32_3882 Shewanella putrefaciens CN-32 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_001185387.1 4506496 D 319224 CDS YP_001185388.1 146294964 5081265 4507117..4508916 1 NC_009438.1 TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin binding domain; molybdopterin-guanine dinucleotide biosynthesis MobB region; MoeA domain protein, domain I and II; MoeA domain protein, domain IV; KEGG: she:Shewmr4_3878 molybdopterin-guanine dinucleotide biosynthesis protein B; putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA 4508916 5081265 Sputcn32_3883 Shewanella putrefaciens CN-32 putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobB/MoeA YP_001185388.1 4507117 D 319224 CDS YP_001185389.1 146294965 5081266 4508933..4509916 1 NC_009438.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 4509916 5081266 Sputcn32_3884 Shewanella putrefaciens CN-32 molybdenum cofactor biosynthesis protein A YP_001185389.1 4508933 D 319224 CDS YP_001185390.1 146294966 5081267 4510003..4510467 1 NC_009438.1 KEGG: son:SO4725 hypothetical protein; hypothetical protein 4510467 5081267 Sputcn32_3885 Shewanella putrefaciens CN-32 hypothetical protein YP_001185390.1 4510003 D 319224 CDS YP_001185391.1 146294967 5081268 4510500..4511315 1 NC_009438.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 4511315 5081268 Sputcn32_3886 Shewanella putrefaciens CN-32 formamidopyrimidine-DNA glycosylase YP_001185391.1 4510500 D 319224 CDS YP_001185392.1 146294968 5081269 complement(4511376..4512851) 1 NC_009438.1 KEGG: shm:Shewmr7_3982 hypothetical protein; hypothetical protein 4512851 5081269 Sputcn32_3887 Shewanella putrefaciens CN-32 hypothetical protein YP_001185392.1 4511376 R 319224 CDS YP_001185393.1 146294969 5081270 complement(4512942..4513433) 1 NC_009438.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 4513433 coaD 5081270 coaD Shewanella putrefaciens CN-32 phosphopantetheine adenylyltransferase YP_001185393.1 4512942 R 319224 CDS YP_001185394.1 146294970 5081271 4513814..4515655 1 NC_009438.1 PFAM: sulfatase; KEGG: vvu:VV10813 predicted hydrolase of alkaline phosphatase superfamily; sulfatase 4515655 5081271 Sputcn32_3889 Shewanella putrefaciens CN-32 sulfatase YP_001185394.1 4513814 D 319224 CDS YP_001185395.1 146294971 5081272 complement(4515722..4516267) 1 NC_009438.1 KEGG: sbo:SBO_0865 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 4516267 5081272 Sputcn32_3890 Shewanella putrefaciens CN-32 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001185395.1 4515722 R 319224 CDS YP_001185396.1 146294972 5081273 complement(4516313..4517197) 1 NC_009438.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KEGG: sfr:Sfri_2828 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4517197 5081273 Sputcn32_3891 Shewanella putrefaciens CN-32 dTDP-4-dehydrorhamnose reductase YP_001185396.1 4516313 R 319224 CDS YP_001185397.1 146294973 5081274 complement(4517310..4518077) 1 NC_009438.1 PFAM: glycosyl transferase, family 2; KEGG: ppr:PBPRA0213 putative lipopolysaccharide biosynthesis glycosyltransferase; glycosyl transferase family protein 4518077 5081274 Sputcn32_3892 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001185397.1 4517310 R 319224 CDS YP_001185398.1 146294974 5081275 complement(4518116..4519174) 1 NC_009438.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: shm:Shewmr7_3986 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase 4519174 5081275 Sputcn32_3893 Shewanella putrefaciens CN-32 CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase YP_001185398.1 4518116 R 319224 CDS YP_001185399.1 146294975 5081276 4519488..4520663 1 NC_009438.1 PFAM: UDP-galactopyranose mutase; KEGG: atc:AGR_L_1762 probable UDP-galactopyranose mutase; UDP-galactopyranose mutase 4520663 5081276 Sputcn32_3894 Shewanella putrefaciens CN-32 UDP-galactopyranose mutase YP_001185399.1 4519488 D 319224 CDS YP_001185400.1 146294976 5081277 4520665..4521465 1 NC_009438.1 KEGG: sme:SMb21065 hypothetical protein; hypothetical protein 4521465 5081277 Sputcn32_3895 Shewanella putrefaciens CN-32 hypothetical protein YP_001185400.1 4520665 D 319224 CDS YP_001185401.1 146294977 5081278 complement(4521531..4522241) 1 NC_009438.1 PFAM: glycosyl transferase, family 25; KEGG: vpa:VP0210 putative Lex2B; glycosyl transferase family protein 4522241 5081278 Sputcn32_3896 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001185401.1 4521531 R 319224 CDS YP_001185402.1 146294978 5081327 complement(4522312..4523355) 1 NC_009438.1 PFAM: glycosyl transferase, family 9; KEGG: son:SO4678 heptosyl transferase, glycosyltransferase family 9 protein; glycosyl transferase family protein 4523355 5081327 Sputcn32_3897 Shewanella putrefaciens CN-32 glycosyl transferase family protein YP_001185402.1 4522312 R 319224 CDS YP_001185403.1 146294979 5081328 4523454..4524215 1 NC_009438.1 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 4524215 5081328 Sputcn32_3898 Shewanella putrefaciens CN-32 3-deoxy-D-manno-octulosonic-acid kinase YP_001185403.1 4523454 D 319224 CDS YP_001185404.1 146294980 5081329 complement(4524256..4525521) 1 NC_009438.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: son:SO4676 3-deoxy-D-manno-octulosonic-acid (KDO) transferase; 3-deoxy-D-manno-octulosonic-acid transferase 4525521 5081329 Sputcn32_3899 Shewanella putrefaciens CN-32 3-deoxy-D-manno-octulosonic-acid transferase YP_001185404.1 4524256 R 319224 CDS YP_001185405.1 146294981 5081330 4525721..4526368 1 NC_009438.1 PFAM: regulatory protein, TetR; KEGG: son:SO4675 transcriptional regulator, TetR family; TetR family transcriptional regulator 4526368 5081330 Sputcn32_3900 Shewanella putrefaciens CN-32 TetR family transcriptional regulator YP_001185405.1 4525721 D 319224 CDS YP_001185406.1 146294982 5081331 4526664..4527857 1 NC_009438.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase 4527857 5081331 Sputcn32_3901 Shewanella putrefaciens CN-32 2-amino-3-ketobutyrate coenzyme A ligase YP_001185406.1 4526664 D 319224 CDS YP_001185407.1 146294983 5081332 4527869..4528894 1 NC_009438.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 4528894 tdh 5081332 tdh Shewanella putrefaciens CN-32 L-threonine 3-dehydrogenase YP_001185407.1 4527869 D 319224 CDS YP_001185408.1 146294984 5081333 4528932..4529303 1 NC_009438.1 PFAM: Rhodanese domain protein; KEGG: shm:Shewmr7_3994 rhodanese domain protein; rhodanese domain-containing protein 4529303 5081333 Sputcn32_3903 Shewanella putrefaciens CN-32 rhodanese domain-containing protein YP_001185408.1 4528932 D 319224 CDS YP_001185409.1 146294985 5081334 4529300..4530145 1 NC_009438.1 PFAM: Rhomboid family protein; KEGG: shm:Shewmr7_3995 rhomboid family protein; rhomboid family protein 4530145 5081334 Sputcn32_3904 Shewanella putrefaciens CN-32 rhomboid family protein YP_001185409.1 4529300 D 319224 CDS YP_001185410.1 146294986 5081335 complement(4530238..4530894) 1 NC_009438.1 PFAM: ThiJ/PfpI domain protein; KEGG: son:SO4670 enhancing lycopene biosynthesis protein; isoprenoid biosynthesis protein with amidotransferase-like domain 4530894 5081335 Sputcn32_3905 Shewanella putrefaciens CN-32 isoprenoid biosynthesis protein with amidotransferase-like domain YP_001185410.1 4530238 R 319224 CDS YP_001185411.1 146294987 5081336 4531281..4534049 1 NC_009438.1 KEGG: shm:Shewmr7_3997 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein, class 2; DNA polymerase I 4534049 5081336 Sputcn32_3906 Shewanella putrefaciens CN-32 DNA polymerase I YP_001185411.1 4531281 D 319224 CDS YP_001185412.1 146294988 5081337 complement(4534861..4535520) 1 NC_009438.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4535520 engB 5081337 engB Shewanella putrefaciens CN-32 ribosome biogenesis GTP-binding protein YsxC YP_001185412.1 4534861 R 319224 CDS YP_001185413.1 146294989 5081338 4535690..4536313 1 NC_009438.1 PFAM: cytochrome c, class I; KEGG: son:SO4666 cytochrome c; cytochrome c, class I 4536313 5081338 Sputcn32_3908 Shewanella putrefaciens CN-32 cytochrome c, class I YP_001185413.1 4535690 D 319224 CDS YP_001185414.1 146294990 5081339 complement(4536472..4536714) 1 NC_009438.1 hypothetical protein 4536714 5081339 Sputcn32_3909 Shewanella putrefaciens CN-32 hypothetical protein YP_001185414.1 4536472 R 319224 CDS YP_001185415.1 146294991 5081340 4537132..4537770 1 NC_009438.1 KEGG: son:SO4727 hypothetical protein; hypothetical protein 4537770 5081340 Sputcn32_3910 Shewanella putrefaciens CN-32 hypothetical protein YP_001185415.1 4537132 D 319224 CDS YP_001185416.1 146294992 5081341 4537861..4538412 1 NC_009438.1 PFAM: protein of unknown function DUF414; KEGG: son:SO4728 hypothetical protein; hypothetical protein 4538412 5081341 Sputcn32_3911 Shewanella putrefaciens CN-32 hypothetical protein YP_001185416.1 4537861 D 319224 CDS YP_001185417.1 146294993 5081342 4538482..4538949 1 NC_009438.1 KEGG: shm:Shewmr7_4002 hypothetical protein; hypothetical protein 4538949 5081342 Sputcn32_3912 Shewanella putrefaciens CN-32 hypothetical protein YP_001185417.1 4538482 D 319224 CDS YP_001185418.1 146294994 5081343 4539234..4540574 1 NC_009438.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4540574 5081343 Sputcn32_3913 Shewanella putrefaciens CN-32 coproporphyrinogen III oxidase YP_001185418.1 4539234 D 319224 CDS YP_001185419.1 146294995 5081344 complement(4540659..4541654) 1 NC_009438.1 catalyzes the formation of inosine from adenosine; adenosine deaminase 4541654 5081344 Sputcn32_3914 Shewanella putrefaciens CN-32 adenosine deaminase YP_001185419.1 4540659 R 319224 CDS YP_001185420.1 146294996 5081345 4541865..4543676 1 NC_009438.1 PFAM: protein of unknown function DUF885; KEGG: shm:Shewmr7_4005 protein of unknown function DUF885; hypothetical protein 4543676 5081345 Sputcn32_3915 Shewanella putrefaciens CN-32 hypothetical protein YP_001185420.1 4541865 D 319224 CDS YP_001185421.1 146294997 5081346 4543772..4544755 1 NC_009438.1 PFAM: alpha/beta hydrolase fold; KEGG: she:Shewmr4_3914 alpha/beta hydrolase fold; alpha/beta hydrolase fold domain-containing protein 4544755 5081346 Sputcn32_3916 Shewanella putrefaciens CN-32 alpha/beta hydrolase fold domain-containing protein YP_001185421.1 4543772 D 319224 CDS YP_001185422.1 146294998 5081347 complement(4544712..4547162) 1 NC_009438.1 KEGG: shm:Shewmr7_4007 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 4547162 5081347 Sputcn32_3917 Shewanella putrefaciens CN-32 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_001185422.1 4544712 R 319224 CDS YP_001185423.1 146294999 5081351 complement(4553122..4554549) 1 NC_009438.1 PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: son:SO4737 iron-sulfur cluster-binding protein; 4Fe-4S ferredoxin 4554549 5081351 Sputcn32_3918 Shewanella putrefaciens CN-32 4Fe-4S ferredoxin YP_001185423.1 4553122 R 319224 CDS YP_001185424.1 146295000 5081352 4554641..4554991 1 NC_009438.1 KEGG: she:Shewmr4_3917 hypothetical protein; hypothetical protein 4554991 5081352 Sputcn32_3919 Shewanella putrefaciens CN-32 hypothetical protein YP_001185424.1 4554641 D 319224 CDS YP_001185425.1 146295001 5081353 4555110..4556012 1 NC_009438.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 4556012 5081353 Sputcn32_3920 Shewanella putrefaciens CN-32 naphthoate synthase YP_001185425.1 4555110 D 319224 CDS YP_001185426.1 146295002 5081354 4556196..4556399 1 NC_009438.1 KEGG: she:Shewmr4_3919 hypothetical protein; hypothetical protein 4556399 5081354 Sputcn32_3921 Shewanella putrefaciens CN-32 hypothetical protein YP_001185426.1 4556196 D 319224 CDS YP_001185427.1 146295003 5081355 complement(4556700..4560485) 1 NC_009438.1 KEGG: rxy:Rxyl_1790 superfamily I DNA and RNA helicases and helicase subunits-like protein; superfamily I DNA/RNA helicase 4560485 5081355 Sputcn32_3922 Shewanella putrefaciens CN-32 superfamily I DNA/RNA helicase YP_001185427.1 4556700 R 319224 CDS YP_001185428.1 146295004 5081356 4560533..4560817 1 NC_009438.1 PFAM: transposase IS3/IS911 family protein; KEGG: vpa:VP1788 putative transposase; transposase IS3/IS911 family protein 4560817 5081356 Sputcn32_3923 Shewanella putrefaciens CN-32 transposase IS3/IS911 family protein YP_001185428.1 4560533 D 319224 CDS YP_001185429.1 146295005 5081357 4560868..4561683 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: vpa:VP1787 putative transposase; integrase catalytic subunit 4561683 5081357 Sputcn32_3924 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001185429.1 4560868 D 319224 CDS YP_001185430.1 146295006 5081358 complement(4561646..4562197) 1 NC_009438.1 hypothetical protein 4562197 5081358 Sputcn32_3925 Shewanella putrefaciens CN-32 hypothetical protein YP_001185430.1 4561646 R 319224 CDS YP_001185431.1 146295007 5081359 complement(4562360..4563397) 1 NC_009438.1 KEGG: sth:STH2261 putative DNA modification methylase; putative DNA modification methylase 4563397 5081359 Sputcn32_3926 Shewanella putrefaciens CN-32 putative DNA modification methylase YP_001185431.1 4562360 R 319224 CDS YP_001185432.1 146295008 5081360 4563564..4563926 1 NC_009438.1 PFAM: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4563926 5081360 Sputcn32_3927 Shewanella putrefaciens CN-32 helix-turn-helix domain-containing protein YP_001185432.1 4563564 D 319224 CDS YP_001185433.1 146295009 5081361 complement(4564275..4564994) 1 NC_009438.1 hypothetical protein 4564994 5081361 Sputcn32_3928 Shewanella putrefaciens CN-32 hypothetical protein YP_001185433.1 4564275 R 319224 CDS YP_001185434.1 146295010 5081362 complement(4564981..4565766) 1 NC_009438.1 hypothetical protein 4565766 5081362 Sputcn32_3929 Shewanella putrefaciens CN-32 hypothetical protein YP_001185434.1 4564981 R 319224 CDS YP_001185435.1 146295011 5081363 complement(4566423..4567994) 1 NC_009438.1 KEGG: ssn:SSO_3895 transposition regulatory protein; transposition regulatory protein 4567994 5081363 Sputcn32_3930 Shewanella putrefaciens CN-32 transposition regulatory protein YP_001185435.1 4566423 R 319224 CDS YP_001185436.1 146295012 5081364 complement(4568042..4569553) 1 NC_009438.1 KEGG: ssn:SSO_3894 transposition protein; transposition protein 4569553 5081364 Sputcn32_3931 Shewanella putrefaciens CN-32 transposition protein YP_001185436.1 4568042 R 319224 CDS YP_001185437.1 146295013 5081365 complement(4569771..4570073) 1 NC_009438.1 hypothetical protein 4570073 5081365 Sputcn32_3932 Shewanella putrefaciens CN-32 hypothetical protein YP_001185437.1 4569771 R 319224 CDS YP_001185438.1 146295014 5081366 4570180..4570566 1 NC_009438.1 hypothetical protein 4570566 5081366 Sputcn32_3933 Shewanella putrefaciens CN-32 hypothetical protein YP_001185438.1 4570180 D 319224 CDS YP_001185439.1 146295015 5081367 complement(4570690..4572330) 1 NC_009438.1 SMART: AAA ATPase; KEGG: ssn:SSO_3893 ATP-binding protein; ATPase AAA 4572330 5081367 Sputcn32_3934 Shewanella putrefaciens CN-32 ATPase AAA YP_001185439.1 4570690 R 319224 CDS YP_001185440.1 146295016 5081368 complement(4572327..4574420) 1 NC_009438.1 KEGG: ssn:SSO_3892 putative transposase; putative transposase 4574420 5081368 Sputcn32_3935 Shewanella putrefaciens CN-32 putative transposase YP_001185440.1 4572327 R 319224 CDS YP_001185441.1 146295017 5081370 4575639..4576766 1 NC_009438.1 KEGG: eba:ebA515 hypothetical protein; hypothetical protein 4576766 5081370 Sputcn32_3937 Shewanella putrefaciens CN-32 hypothetical protein YP_001185441.1 4575639 D 319224 CDS YP_001185442.1 146295018 5081371 4576732..4578279 1 NC_009438.1 KEGG: eba:ebA514 hypothetical protein; hypothetical protein 4578279 5081371 Sputcn32_3938 Shewanella putrefaciens CN-32 hypothetical protein YP_001185442.1 4576732 D 319224 CDS YP_001185443.1 146295019 5081372 4578385..4580286 1 NC_009438.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cte:CT1913 DNA methylase, putative; DNA methylase N-4/N-6 domain-containing protein 4580286 5081372 Sputcn32_3939 Shewanella putrefaciens CN-32 DNA methylase N-4/N-6 domain-containing protein YP_001185443.1 4578385 D 319224 CDS YP_001185444.1 146295020 5081373 complement(4580323..4581363) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: son:SOA0151 ISSod13, transposase; integrase catalytic subunit 4581363 5081373 Sputcn32_3940 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001185444.1 4580323 R 319224 CDS YP_001185445.1 146295021 5081374 complement(4581480..4582835) 1 NC_009438.1 KEGG: cte:CT1914 hypothetical protein; hypothetical protein 4582835 5081374 Sputcn32_3941 Shewanella putrefaciens CN-32 hypothetical protein YP_001185445.1 4581480 R 319224 CDS YP_001185446.1 146295022 5081375 complement(4582838..4585003) 1 NC_009438.1 KEGG: cte:CT1915 hypothetical protein; hypothetical protein 4585003 5081375 Sputcn32_3942 Shewanella putrefaciens CN-32 hypothetical protein YP_001185446.1 4582838 R 319224 CDS YP_001185447.1 146295023 5081376 complement(4585157..4586776) 1 NC_009438.1 KEGG: ilo:IL2609 transposon Tn7 transposition transposition regulatory protein TnsE; hypothetical protein 4586776 5081376 Sputcn32_3943 Shewanella putrefaciens CN-32 hypothetical protein YP_001185447.1 4585157 R 319224 CDS YP_001185448.1 146295024 5081427 complement(4586776..4588293) 1 NC_009438.1 KEGG: ilo:IL2610 transposon Tn7 transposition protein TnsD; transposon Tn7 transposition protein TnsD 4588293 5081427 Sputcn32_3944 Shewanella putrefaciens CN-32 transposon Tn7 transposition protein TnsD YP_001185448.1 4586776 R 319224 CDS YP_001185449.1 146295025 5081428 complement(4588296..4589906) 1 NC_009438.1 KEGG: ilo:IL2611 transposon Tn7 transposition protein TnsC; transposon Tn7 transposition protein TnsC 4589906 5081428 Sputcn32_3945 Shewanella putrefaciens CN-32 transposon Tn7 transposition protein TnsC YP_001185449.1 4588296 R 319224 CDS YP_001185450.1 146295026 5081429 complement(4589899..4591989) 1 NC_009438.1 PFAM: Integrase, catalytic region; KEGG: ilo:IL2612 transposon Tn7 transposition protein TnsB; integrase catalytic subunit 4591989 5081429 Sputcn32_3946 Shewanella putrefaciens CN-32 integrase catalytic subunit YP_001185450.1 4589899 R 319224 CDS YP_001185451.1 146295027 5081430 complement(4591976..4592803) 1 NC_009438.1 KEGG: ilo:IL2613 transposon Tn7 transposition protein TnsA; transposon Tn7 transposition protein TnsA 4592803 5081430 Sputcn32_3947 Shewanella putrefaciens CN-32 transposon Tn7 transposition protein TnsA YP_001185451.1 4591976 R 319224 CDS YP_001185452.1 146295028 5081431 complement(4593046..4594074) 1 NC_009438.1 PFAM: protein of unknown function DUF1526; KEGG: cef:CE0419 hypothetical protein; hypothetical protein 4594074 5081431 Sputcn32_3948 Shewanella putrefaciens CN-32 hypothetical protein YP_001185452.1 4593046 R 319224 CDS YP_001185453.1 146295029 5081432 complement(4594221..4594490) 1 NC_009438.1 hypothetical protein 4594490 5081432 Sputcn32_3949 Shewanella putrefaciens CN-32 hypothetical protein YP_001185453.1 4594221 R 319224 CDS YP_001185454.1 146295030 5081433 complement(4594624..4595934) 1 NC_009438.1 hypothetical protein 4595934 5081433 Sputcn32_3950 Shewanella putrefaciens CN-32 hypothetical protein YP_001185454.1 4594624 R 319224 CDS YP_001185455.1 146295031 5081434 complement(4596272..4598101) 1 NC_009438.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 4598101 5081434 Sputcn32_3951 Shewanella putrefaciens CN-32 glucosamine--fructose-6-phosphate aminotransferase YP_001185455.1 4596272 R 319224 CDS YP_001185456.1 146295032 5081435 complement(4598146..4598916) 1 NC_009438.1 PFAM: regulatory protein, DeoR; Helix-turn-helix, type 11 domain protein; KEGG: son:SO4742 transcriptional regulator, DeoR family; DeoR family transcriptional regulator 4598916 5081435 Sputcn32_3952 Shewanella putrefaciens CN-32 DeoR family transcriptional regulator YP_001185456.1 4598146 R 319224 CDS YP_001185457.1 146295033 5081436 complement(4599117..4601222) 1 NC_009438.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor, plug; KEGG: son:SO4743 TonB-dependent receptor, putative; TonB-dependent siderophore receptor 4601222 5081436 Sputcn32_3953 Shewanella putrefaciens CN-32 TonB-dependent siderophore receptor YP_001185457.1 4599117 R 319224 CDS YP_001185458.1 146295034 5081437 complement(4601499..4602863) 1 NC_009438.1 KEGG: she:Shewmr4_3923 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; UDP-N-acetylglucosamine pyrophosphorylase 4602863 5081437 Sputcn32_3954 Shewanella putrefaciens CN-32 UDP-N-acetylglucosamine pyrophosphorylase YP_001185458.1 4601499 R 319224 CDS YP_001185459.1 146295035 5081438 complement(4603061..4603489) 1 NC_009438.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 4603489 atpC 5081438 atpC Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit epsilon YP_001185459.1 4603061 R 319224 CDS YP_001185460.1 146295036 5081439 complement(4603524..4604915) 1 NC_009438.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 4604915 5081439 Sputcn32_3956 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit beta YP_001185460.1 4603524 R 319224 CDS YP_001185461.1 146295037 5081440 complement(4604951..4605811) 1 NC_009438.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 4605811 5081440 Sputcn32_3957 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit gamma YP_001185461.1 4604951 R 319224 CDS YP_001185462.1 146295038 5081441 complement(4605862..4607403) 1 NC_009438.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 4607403 5081441 Sputcn32_3958 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit alpha YP_001185462.1 4605862 R 319224 CDS YP_001185463.1 146295039 5081442 complement(4607418..4607951) 1 NC_009438.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 4607951 5081442 Sputcn32_3959 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit delta YP_001185463.1 4607418 R 319224 CDS YP_001185464.1 146295040 5081443 complement(4607967..4608437) 1 NC_009438.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 4608437 5081443 Sputcn32_3960 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit B YP_001185464.1 4607967 R 319224 CDS YP_001185465.1 146295041 5081444 complement(4608465..4608719) 1 NC_009438.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 4608719 5081444 Sputcn32_3961 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit C YP_001185465.1 4608465 R 319224 CDS YP_001185466.1 146295042 5081445 complement(4608755..4609576) 1 NC_009438.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 4609576 5081445 Sputcn32_3962 Shewanella putrefaciens CN-32 F0F1 ATP synthase subunit A YP_001185466.1 4608755 R 319224 CDS YP_001185467.1 146295043 5081446 complement(4609589..4610044) 1 NC_009438.1 PFAM: ATP synthase I chain; KEGG: shm:Shewmr7_4024 ATP synthase I chain; ATP synthase I chain 4610044 5081446 Sputcn32_3963 Shewanella putrefaciens CN-32 ATP synthase I chain YP_001185467.1 4609589 R 319224 CDS YP_001185468.1 146295044 5081447 complement(4610198..4611076) 1 NC_009438.1 TIGRFAM: parB-like partition proteins; PFAM: ParB domain protein nuclease; KEGG: shm:Shewmr7_4025 ParB-like partition proteins; parB-like partition protein 4611076 5081447 Sputcn32_3964 Shewanella putrefaciens CN-32 parB-like partition protein YP_001185468.1 4610198 R 319224 CDS YP_001185469.1 146295045 5081448 complement(4611086..4611874) 1 NC_009438.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: shm:Shewmr7_4026 cobyrinic acid a,c-diamide synthase; cobyrinic acid a,c-diamide synthase 4611874 5081448 Sputcn32_3965 Shewanella putrefaciens CN-32 cobyrinic acid a,c-diamide synthase YP_001185469.1 4611086 R 319224 CDS YP_001185470.1 146295046 5081449 complement(4611949..4612569) 1 NC_009438.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 4612569 gidB 5081449 gidB Shewanella putrefaciens CN-32 16S rRNA methyltransferase GidB YP_001185470.1 4611949 R 319224 CDS YP_001185471.1 146295047 5081450 complement(4612687..4614576) 1 NC_009438.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 4614576 5081450 Sputcn32_3967 Shewanella putrefaciens CN-32 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_001185471.1 4612687 R 319224 CDS YP_001185472.1 146295048 5081451 complement(4615016..4615477) 1 NC_009438.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 4615477 5081451 Sputcn32_3968 Shewanella putrefaciens CN-32 flavodoxin YP_001185472.1 4615016 R 319224 CDS YP_001185473.1 146295049 5081452 4615637..4617190 1 NC_009438.1 PFAM: TGF-beta receptor, type I/II extracellular region; KEGG: she:Shewmr4_3938 TGF-beta receptor, type I/II extracellular region; TGF-beta receptor, type I/II extracellular region 4617190 5081452 Sputcn32_3969 Shewanella putrefaciens CN-32 TGF-beta receptor, type I/II extracellular region YP_001185473.1 4615637 D 319224 CDS YP_001185474.1 146295050 5081454 complement(4620452..4621609) 1 NC_009438.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSp0313 probable multidrug efflux system protein; RND family efflux transporter MFP subunit 4621609 5081454 Sputcn32_3971 Shewanella putrefaciens CN-32 RND family efflux transporter MFP subunit YP_001185474.1 4620452 R 319224 CDS YP_001185475.1 146295051 5081455 4621775..4622503 1 NC_009438.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rso:RS05454 probable two component response regulator transcription regulator protein; two component transcriptional regulator 4622503 5081455 Sputcn32_3972 Shewanella putrefaciens CN-32 two component transcriptional regulator YP_001185475.1 4621775 D 319224 CDS YP_001185476.1 146295052 5081456 4622500..4623594 1 NC_009438.1 PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein; KEGG: rru:Rru_A2930 periplasmic sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 4623594 5081456 Sputcn32_3973 Shewanella putrefaciens CN-32 integral membrane sensor signal transduction histidine kinase YP_001185476.1 4622500 D 319224 CDS YP_001185477.1 146295053 5081457 4623937..4624158 1 NC_009438.1 KEGG: sdn:Sden_3021 integrase, catalytic region; hypothetical protein 4624158 5081457 Sputcn32_3974 Shewanella putrefaciens CN-32 hypothetical protein YP_001185477.1 4623937 D 319224 CDS YP_001185478.1 146295054 5081459 4624844..4625686 1 NC_009438.1 hypothetical protein 4625686 5081459 Sputcn32_3976 Shewanella putrefaciens CN-32 hypothetical protein YP_001185478.1 4624844 D 319224 CDS YP_001185479.1 146295055 5081460 4625683..4626114 1 NC_009438.1 hypothetical protein 4626114 5081460 Sputcn32_3977 Shewanella putrefaciens CN-32 hypothetical protein YP_001185479.1 4625683 D 319224 CDS YP_001185480.1 146295056 5081461 4626111..4626623 1 NC_009438.1 hypothetical protein 4626623 5081461 Sputcn32_3978 Shewanella putrefaciens CN-32 hypothetical protein YP_001185480.1 4626111 D 319224 CDS YP_001185481.1 146295057 5081462 4626756..4627382 1 NC_009438.1 PFAM: Resolvase, N-terminal domain; KEGG: atc:AGR_L_1981 hypothetical protein; resolvase domain-containing protein 4627382 5081462 Sputcn32_3979 Shewanella putrefaciens CN-32 resolvase domain-containing protein YP_001185481.1 4626756 D 319224 CDS YP_001185482.1 146295058 5081463 4627574..4627804 1 NC_009438.1 KEGG: hch:HCH_05031 predicted transcriptional regulator; transcriptional regulator 4627804 5081463 Sputcn32_3980 Shewanella putrefaciens CN-32 transcriptional regulator YP_001185482.1 4627574 D 319224 CDS YP_001185483.1 146295059 5081464 4627801..4629300 1 NC_009438.1 PFAM: N-6 DNA methylase; KEGG: vvy:VV2208 type I restriction-modification system methyltransferase subunit; N-6 DNA methylase 4629300 5081464 Sputcn32_3981 Shewanella putrefaciens CN-32 N-6 DNA methylase YP_001185483.1 4627801 D 319224 CDS YP_001185484.1 146295060 5081465 4629297..4629926 1 NC_009438.1 KEGG: cch:Cag_1884 hypothetical protein; hypothetical protein 4629926 5081465 Sputcn32_3982 Shewanella putrefaciens CN-32 hypothetical protein YP_001185484.1 4629297 D 319224 CDS YP_001185485.1 146295061 5081466 4629919..4631373 1 NC_009438.1 PFAM: AAA-4 family protein; KEGG: cch:Cag_1885 putative transcriptional regulator; putative transcriptional regulator 4631373 5081466 Sputcn32_3983 Shewanella putrefaciens CN-32 putative transcriptional regulator YP_001185485.1 4629919 D 319224 CDS YP_001185486.1 146295062 5081467 4631370..4632887 1 NC_009438.1 PFAM: N-6 DNA methylase; KEGG: vvy:VV2206 type I restriction-modification system methyltransferase subunit; N-6 DNA methylase 4632887 5081467 Sputcn32_3984 Shewanella putrefaciens CN-32 N-6 DNA methylase YP_001185486.1 4631370 D 319224 CDS YP_001185487.1 146295063 5081468 4632887..4634092 1 NC_009438.1 PFAM: restriction modification system DNA specificity domain; KEGG: vfi:VFA0538 type I restriction-modification system specificity subunit; restriction modification system DNA specificity subunit 4634092 5081468 Sputcn32_3985 Shewanella putrefaciens CN-32 restriction modification system DNA specificity subunit YP_001185487.1 4632887 D 319224 CDS YP_001185488.1 146295064 5081469 4634093..4637155 1 NC_009438.1 KEGG: vvy:VV2204 putative type I site-specific restriction-modification system, R (restriction) subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction enzyme, res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases-like; HsdR family type I site-specific deoxyribonuclease 4637155 5081469 Sputcn32_3986 Shewanella putrefaciens CN-32 HsdR family type I site-specific deoxyribonuclease YP_001185488.1 4634093 D 319224 CDS YP_001185489.1 146295065 5081470 4637195..4639606 1 NC_009438.1 KEGG: aci:ACIAD0152 hypothetical protein; hypothetical protein 4639606 5081470 Sputcn32_3987 Shewanella putrefaciens CN-32 hypothetical protein YP_001185489.1 4637195 D 319224 CDS YP_001185490.1 146295066 5081471 4639658..4640692 1 NC_009438.1 KEGG: eci:UTI89_C4212 putative cytoplasmic protein; putative cytoplasmic protein 4640692 5081471 Sputcn32_3988 Shewanella putrefaciens CN-32 putative cytoplasmic protein YP_001185490.1 4639658 D 319224 CDS YP_001185491.1 146295067 5081472 complement(4640750..4641334) 1 NC_009438.1 hypothetical protein 4641334 5081472 Sputcn32_3989 Shewanella putrefaciens CN-32 hypothetical protein YP_001185491.1 4640750 R 319224 CDS YP_001185492.1 146295068 5081473 4642062..4643732 1 NC_009438.1 KEGG: shm:Shewmr7_0346 superfamily II helicase and inactivated derivatives-like protein; superfamily II helicase 4643732 5081473 Sputcn32_3990 Shewanella putrefaciens CN-32 superfamily II helicase YP_001185492.1 4642062 D 319224 CDS YP_001185493.1 146295069 5081474 4643792..4644136 1 NC_009438.1 TIGRFAM: DNA binding domain, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: bfr:BF2790 putative excisionase; phage transcriptional regulator AlpA 4644136 5081474 Sputcn32_3991 Shewanella putrefaciens CN-32 phage transcriptional regulator AlpA YP_001185493.1 4643792 D 319224 CDS YP_001185494.1 146295070 5081475 complement(4644830..4645162) 1 NC_009438.1 KEGG: sfr:Sfri_2519 hypothetical protein; hypothetical protein 4645162 5081475 Sputcn32_3992 Shewanella putrefaciens CN-32 hypothetical protein YP_001185494.1 4644830 R 319224 CDS YP_001185495.1 146295071 5081476 complement(4645185..4645718) 1 NC_009438.1 KEGG: sfr:Sfri_2520 hypothetical protein; hypothetical protein 4645718 5081476 Sputcn32_3993 Shewanella putrefaciens CN-32 hypothetical protein YP_001185495.1 4645185 R 319224 CDS YP_001185496.1 146295072 5081477 complement(4645739..4646434) 1 NC_009438.1 KEGG: sfr:Sfri_2521 hypothetical protein; hypothetical protein 4646434 5081477 Sputcn32_3994 Shewanella putrefaciens CN-32 hypothetical protein YP_001185496.1 4645739 R 319224 CDS YP_001185497.1 146295073 5081504 complement(4646424..4649567) 1 NC_009438.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: tcx:Tcr_2095 heavy metal efflux pump CzcA; CzcA family heavy metal efflux protein 4649567 5081504 Sputcn32_3995 Shewanella putrefaciens CN-32 CzcA family heavy metal efflux protein YP_001185497.1 4646424 R 319224 CDS YP_001185498.1 146295074 5081505 complement(4649579..4650823) 1 NC_009438.1 KEGG: tcx:Tcr_2096 secretion protein HlyD; secretion protein HlyD 4650823 5081505 Sputcn32_3996 Shewanella putrefaciens CN-32 secretion protein HlyD YP_001185498.1 4649579 R 319224 CDS YP_001185499.1 146295075 5081506 complement(4650832..4652115) 1 NC_009438.1 KEGG: tcx:Tcr_2097 outer membrane efflux protein; outer membrane efflux protein 4652115 5081506 Sputcn32_3997 Shewanella putrefaciens CN-32 outer membrane efflux protein YP_001185499.1 4650832 R 319224 CDS YP_001185500.1 146295076 5081507 complement(4652129..4653109) 1 NC_009438.1 PFAM: peptidase M48, Ste24p; peptidase M56, BlaR1; KEGG: sfr:Sfri_2522 peptidase M56, BlaR1; peptidase M56, BlaR1 4653109 5081507 Sputcn32_3998 Shewanella putrefaciens CN-32 peptidase M56, BlaR1 YP_001185500.1 4652129 R 319224 CDS YP_001185501.1 146295077 5081508 complement(4653118..4653495) 1 NC_009438.1 PFAM: transcriptional regulator TrmB; Penicillinase repressor; KEGG: sfr:Sfri_2523 transcriptional repressor, CopY family protein; transcriptional regulator TrmB 4653495 5081508 Sputcn32_3999 Shewanella putrefaciens CN-32 transcriptional regulator TrmB YP_001185501.1 4653118 R 319224 CDS YP_001185502.1 146295078 5081509 complement(4653762..4654931) 1 NC_009438.1 PFAM: phage integrase family protein; KEGG: pgi:PG0874 mobilizable transposon, int protein; phage integrase family protein 4654931 5081509 Sputcn32_4000 Shewanella putrefaciens CN-32 phage integrase family protein YP_001185502.1 4653762 R 319224 CDS YP_001185503.1 146295079 5081510 complement(4655095..4656456) 1 NC_009438.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4656456 trmE 5081510 trmE Shewanella putrefaciens CN-32 tRNA modification GTPase TrmE YP_001185503.1 4655095 R 319224 CDS YP_001185504.1 146295080 5081511 complement(4656564..4658189) 1 NC_009438.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: shm:Shewmr7_4032 60 kDa inner membrane insertion protein; 60 kDa inner membrane insertion protein 4658189 5081511 Sputcn32_4002 Shewanella putrefaciens CN-32 60 kDa inner membrane insertion protein YP_001185504.1 4656564 R 319224 CDS YP_001185505.1 146295081 5081512 complement(4658193..4658447) 1 NC_009438.1 PFAM: protein of unknown function DUF37; KEGG: son:SO0005 conserved hypothetical protein TIGR00278; hypothetical protein 4658447 5081512 Sputcn32_4003 Shewanella putrefaciens CN-32 hypothetical protein YP_001185505.1 4658193 R 319224 CDS YP_001185506.1 146295082 5081513 complement(4658414..4658770) 1 NC_009438.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4658770 rnpA 5081513 rnpA Shewanella putrefaciens CN-32 ribonuclease P YP_001185506.1 4658414 R 319224 CDS YP_001185507.1 146295083 5081514 complement(4658786..4658923) 1 NC_009438.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4658923 rpmH 5081514 rpmH Shewanella putrefaciens CN-32 50S ribosomal protein L34 YP_001185507.1 4658786 R 319224 CDS